Citrus Sinensis ID: 008127
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 577 | 2.2.26 [Sep-21-2011] | |||||||
| Q7XJR9 | 571 | Calcium-dependent protein | yes | no | 0.967 | 0.977 | 0.755 | 0.0 | |
| Q9FKW4 | 523 | Calcium-dependent protein | no | no | 0.906 | 1.0 | 0.737 | 0.0 | |
| Q1PE17 | 534 | Calcium-dependent protein | no | no | 0.925 | 1.0 | 0.712 | 0.0 | |
| Q9SCS2 | 601 | CDPK-related kinase 5 OS= | no | no | 0.932 | 0.895 | 0.437 | 1e-125 | |
| P53681 | 602 | CDPK-related protein kina | N/A | no | 0.793 | 0.760 | 0.495 | 1e-124 | |
| Q9FMP5 | 528 | Calcium-dependent protein | no | no | 0.759 | 0.829 | 0.464 | 1e-123 | |
| Q9FX86 | 606 | CDPK-related kinase 8 OS= | no | no | 0.876 | 0.834 | 0.451 | 1e-123 | |
| O49717 | 554 | Calcium-dependent protein | no | no | 0.838 | 0.873 | 0.439 | 1e-122 | |
| Q3E9C0 | 523 | Calcium-dependent protein | no | no | 0.779 | 0.860 | 0.452 | 1e-122 | |
| Q38870 | 646 | Calcium-dependent protein | no | no | 0.769 | 0.687 | 0.470 | 1e-122 |
| >sp|Q7XJR9|CDPKG_ARATH Calcium-dependent protein kinase 16 OS=Arabidopsis thaliana GN=CPK16 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/590 (75%), Positives = 478/590 (81%), Gaps = 32/590 (5%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARN------DTTHKHQHQHQ 54
MG+C S+ + +SG N ++ N H + K R + H+ Q +
Sbjct: 1 MGLCFSS---AAKSSGHNRSSRNPHPHPPLTVVKSRPPRSPCSFMAVTIQKDHRTQPRRN 57
Query: 55 ERAKNYQQLKTKQHQKT-------NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHG 107
AK T H K N RR IP GKR DFGY KDFD RYTIGKLLGHG
Sbjct: 58 ATAKKTPTRHTPPHGKVREKVISNNGRRHGETIPYGKRVDFGYAKDFDHRYTIGKLLGHG 117
Query: 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167
QFGYTYVATDK GDRVAVKKI+K KM +PIAVEDVKREVKILQAL GHENVV+FYNAFE
Sbjct: 118 QFGYTYVATDKKTGDRVAVKKIDKAKMTIPIAVEDVKREVKILQALTGHENVVRFYNAFE 177
Query: 168 DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVA 227
D N VYI MELCEGGELLDRILA RKDSRY+E+DAAVVVRQML+VA
Sbjct: 178 DKNSVYIVMELCEGGELLDRILA---------------RKDSRYSERDAAVVVRQMLKVA 222
Query: 228 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 287
AECHL GLVHRDMKPENFLFKS +EDS LKATDFGLSDFIKPGKKF DIVGSAYYVAPEV
Sbjct: 223 AECHLRGLVHRDMKPENFLFKSTEEDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEV 282
Query: 288 LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 347
LKR+SGPESDVWSIGVI+YILLCGRRPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISNSAK
Sbjct: 283 LKRRSGPESDVWSIGVISYILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNSAK 342
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALR 407
DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK+SRLKQFALR
Sbjct: 343 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKFSRLKQFALR 402
Query: 408 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC 467
ALA+TLD+EELADLRDQFDAIDVDKNG ISLEEMRQALAKD PWKLK++RV EILQAID
Sbjct: 403 ALATTLDEEELADLRDQFDAIDVDKNGVISLEEMRQALAKDHPWKLKDARVAEILQAIDS 462
Query: 468 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 527
NTDG VDF EFVAA LHV+QLEEHDSEKW RS+AAFEKFDID DGFIT EELRMHTGLK
Sbjct: 463 NTDGFVDFGEFVAAALHVNQLEEHDSEKWQQRSRAAFEKFDIDGDGFITAEELRMHTGLK 522
Query: 528 GSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 577
GSI+PLLEEADID DG+ISL EFRRLLRTASI SRNV SP G+ RK+
Sbjct: 523 GSIEPLLEEADIDNDGKISLQEFRRLLRTASIKSRNV-RSPPGYLISRKV 571
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9FKW4|CDPKS_ARATH Calcium-dependent protein kinase 28 OS=Arabidopsis thaliana GN=CPK28 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/575 (73%), Positives = 481/575 (83%), Gaps = 52/575 (9%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNY 60
MG+C S +V+G++S R +++ ++K
Sbjct: 1 MGVCFSAIRVTGASSS---------RRSSQTKSK-------------------------- 25
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
T K +++R+TG IPCGKRTDFGY KDF YTIGKLLGHGQFGYTYVA + N
Sbjct: 26 -AAPTPIDTKASTKRRTGSIPCGKRTDFGYSKDFHDHYTIGKLLGHGQFGYTYVAIHRPN 84
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
GDRVAVK+++K+KM+LPIAVEDVKREV+IL AL+GHENVV+F+NAFEDD+YVYI MELCE
Sbjct: 85 GDRVAVKRLDKSKMVLPIAVEDVKREVQILIALSGHENVVQFHNAFEDDDYVYIVMELCE 144
Query: 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 240
GGELLDRIL+K K +RY+EKDAAVVVRQML+VA ECHLHGLVHRDM
Sbjct: 145 GGELLDRILSK---------------KGNRYSEKDAAVVVRQMLKVAGECHLHGLVHRDM 189
Query: 241 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWS 300
KPENFLFKSA+ DS LKATDFGLSDFIKPGK+F DIVGSAYYVAPEVLKR+SGPESDVWS
Sbjct: 190 KPENFLFKSAQLDSPLKATDFGLSDFIKPGKRFHDIVGSAYYVAPEVLKRRSGPESDVWS 249
Query: 301 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 360
IGVITYILLCGRRPFWD+TEDGIFKEVLRNKPDF RKPW +IS+SAKDFVKKLLVKDPRA
Sbjct: 250 IGVITYILLCGRRPFWDRTEDGIFKEVLRNKPDFSRKPWATISDSAKDFVKKLLVKDPRA 309
Query: 361 RLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELAD 420
RLTAAQALSH WVREGG+A++IP+DISVLNN+RQFV+YSRLKQFALRALASTLD+ E++D
Sbjct: 310 RLTAAQALSHAWVREGGNATDIPVDISVLNNLRQFVRYSRLKQFALRALASTLDEAEISD 369
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 480
LRDQFDAIDVDKNG ISLEEMRQALAKDLPWKLK+SRV EIL+AID NTDGLVDF+EFVA
Sbjct: 370 LRDQFDAIDVDKNGVISLEEMRQALAKDLPWKLKDSRVAEILEAIDSNTDGLVDFTEFVA 429
Query: 481 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADID 540
A LHVHQLEEHDSEKW LRS+AAFEKFD+D+DG+ITPEELRMHTGL+GSIDPLL+EADID
Sbjct: 430 AALHVHQLEEHDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLRGSIDPLLDEADID 489
Query: 541 KDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPR 575
+DG+ISL EFRRLLRTASISS+ PSP+GHRN R
Sbjct: 490 RDGKISLHEFRRLLRTASISSQRA-PSPAGHRNLR 523
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q1PE17|CDPKI_ARATH Calcium-dependent protein kinase 18 OS=Arabidopsis thaliana GN=CPK18 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/577 (71%), Positives = 460/577 (79%), Gaps = 43/577 (7%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNY 60
MG+C S+ K + +GS N N + E N +HQ
Sbjct: 1 MGLCFSSPKATRRGTGSRNPNPDSPTQGKASEKVSNKNKKNTKKIQLRHQ---------- 50
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
G IP GKR DFGY KDFD RYTIGKLLGHGQFG+TYVATD N
Sbjct: 51 -----------------GGIPYGKRIDFGYAKDFDNRYTIGKLLGHGQFGFTYVATDNNN 93
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
G+RVAVK+I+K KM PI VEDVKREVKILQAL GHENVV F+NAFED Y+YI MELC+
Sbjct: 94 GNRVAVKRIDKAKMTQPIEVEDVKREVKILQALGGHENVVGFHNAFEDKTYIYIVMELCD 153
Query: 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 240
GGELLDRILAK KDSRYTEKDAAVVVRQML+VAAECHL GLVHRDM
Sbjct: 154 GGELLDRILAK---------------KDSRYTEKDAAVVVRQMLKVAAECHLRGLVHRDM 198
Query: 241 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWS 300
KPENFLFKS +E SSLKATDFGLSDFIKPG KFQDIVGSAYYVAPEVLKR+SGPESDVWS
Sbjct: 199 KPENFLFKSTEEGSSLKATDFGLSDFIKPGVKFQDIVGSAYYVAPEVLKRRSGPESDVWS 258
Query: 301 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 360
IGVITYILLCGRRPFWDKT+DGIF EV+R KPDFR PWP+ISN AKDFVKKLLVK+PRA
Sbjct: 259 IGVITYILLCGRRPFWDKTQDGIFNEVMRKKPDFREVPWPTISNGAKDFVKKLLVKEPRA 318
Query: 361 RLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELAD 420
RLTAAQALSH WV+EGG+ASE+PIDISVLNNMRQFVK+SRLKQ ALRALA T++++EL D
Sbjct: 319 RLTAAQALSHSWVKEGGEASEVPIDISVLNNMRQFVKFSRLKQIALRALAKTINEDELDD 378
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 480
LRDQFDAID+DKNGSISLEEMRQALAKD+PWKLK++RV EILQA D NTDGLVDF+EFV
Sbjct: 379 LRDQFDAIDIDKNGSISLEEMRQALAKDVPWKLKDARVAEILQANDSNTDGLVDFTEFVV 438
Query: 481 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADID 540
A LHV+QLEEHDSEKW RS+AAF+KFDID DGFITPEELR+ TGLKGSI+PLLEEAD+D
Sbjct: 439 AALHVNQLEEHDSEKWQQRSRAAFDKFDIDGDGFITPEELRLQTGLKGSIEPLLEEADVD 498
Query: 541 KDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 577
+DGRIS++EFRRLLR+AS+ S+NV SP G++ +K+
Sbjct: 499 EDGRISINEFRRLLRSASLKSKNV-KSPPGYQLSQKM 534
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SCS2|CAMK5_ARATH CDPK-related kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/580 (43%), Positives = 348/580 (60%), Gaps = 42/580 (7%)
Query: 4 CLSTTKVSGSNSG--SNNNNANHHRNANKEEAKRRHNHHARNDTT---HKHQHQHQERAK 58
C++TT G S + + H +K+ R ++ N T K AK
Sbjct: 42 CVTTTNNEGKKSPFFPFYSPSPAHYFFSKKTPARSPATNSTNSTPKRFFKRPFPPPSPAK 101
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTD---------FGYDKDFDRRYTIGKLLGHGQF 109
+ + + ++H + + IP G + FG+ K F +Y +G +G G F
Sbjct: 102 HIRAVLARRHGSV--KPNSSAIPEGSEAEGGGVGLDKSFGFSKSFASKYELGDEVGRGHF 159
Query: 110 GYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 166
GYT A K G +VAVK I K KM IA+EDV+REVKIL+AL+GH N+ FY+A+
Sbjct: 160 GYTCAAKFKKGDNKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALSGHNNLPHFYDAY 219
Query: 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
ED + VYI MELCEGGELLDRIL++ +YTE+DA V+ Q+L V
Sbjct: 220 EDHDNVYIVMELCEGGELLDRILSR----------------GGKYTEEDAKTVMIQILNV 263
Query: 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 286
A CHL G+VHRD+KPENFLF S ++ S LKA DFGLSD+++P ++ DIVGSAYYVAPE
Sbjct: 264 VAFCHLQGVVHRDLKPENFLFTSKEDTSQLKAIDFGLSDYVRPDERLNDIVGSAYYVAPE 323
Query: 287 VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 346
VL R E+D+WS+GVI YILLCG RPFW +TE GIF+ VL+ P F PWP +S+ A
Sbjct: 324 VLHRSYSTEADIWSVGVIVYILLCGSRPFWARTESGIFRAVLKADPSFDDPPWPLLSSEA 383
Query: 347 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFAL 406
+DFVK+LL KDPR RLTAAQALSHPW+++ DA ++P+DI V MR +++ S L++ AL
Sbjct: 384 RDFVKRLLNKDPRKRLTAAQALSHPWIKDSNDA-KVPMDILVFKLMRAYLRSSSLRKAAL 442
Query: 407 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 466
RAL+ TL +EL LR+QF ++ KNG+ISLE ++ AL K +K+SR+ E L +
Sbjct: 443 RALSKTLTVDELFYLREQFALLEPSKNGTISLENIKSALMKMATDAMKDSRIPEFLGQLS 502
Query: 467 CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL 526
+DF EF AA L VHQLE D +W ++ A+E F+ + + I +EL GL
Sbjct: 503 ALQYRRMDFEEFCAAALSVHQLEALD--RWEQHARCAYELFEKEGNRPIMIDELASELGL 560
Query: 527 KGSID--PLLEEADIDKDGRISLSEFRRLLRTASISSRNV 564
S+ +L + DG++S F +LL +SSR +
Sbjct: 561 GPSVPVHAVLHDWLRHTDGKLSFLGFVKLLH--GVSSRTI 598
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P53681|CRK_DAUCA CDPK-related protein kinase OS=Daucus carota GN=CRK PE=2 SV=1 | Back alignment and function description |
|---|
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/482 (49%), Positives = 314/482 (65%), Gaps = 24/482 (4%)
Query: 82 CGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPI 138
G FG+ K F ++ +G+ +G G FGYT A K G VAVK I K KM I
Sbjct: 132 AGLDKSFGFSKKFGSKFEVGEEVGRGHFGYTCRAKFKKGEFKGQDVAVKVIPKAKMTTAI 191
Query: 139 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLT 198
A+EDV+REVKIL+AL GH N+V+FY+AFED VY+ MELCEGGELLDRIL++
Sbjct: 192 AIEDVRREVKILRALTGHNNLVQFYDAFEDHTNVYVVMELCEGGELLDRILSR------- 244
Query: 199 SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258
+YTE DA V+ Q+L V A CHL G+VHRD+KPENFLFKS EDS LKA
Sbjct: 245 ---------GGKYTEDDAKAVMIQILNVVAFCHLQGVVHRDLKPENFLFKSKDEDSQLKA 295
Query: 259 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDK 318
DFGLSD++KP ++ DIVGSAYYVAPEVL R E+DVWSIGVI+YILLCG RPFW +
Sbjct: 296 IDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVISYILLCGSRPFWAR 355
Query: 319 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378
TE GIF+ VL+ F PWPS+S+ AKDFVK+LL KDPR R+TAAQAL H W++ D
Sbjct: 356 TESGIFRAVLKANLSFDEPPWPSVSSEAKDFVKRLLNKDPRKRMTAAQALCHSWIKNSND 415
Query: 379 ASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISL 438
+ P+DI V M+ +++ S L++ ALRAL+ TL +EL L++QF ++ KNG+ISL
Sbjct: 416 I-KFPLDILVFKLMKVYMRSSPLRKAALRALSKTLTVDELFYLKEQFVLLEPTKNGTISL 474
Query: 439 EEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498
E ++QAL ++ +K+SRVL++L +++ +DF EF AA L VHQLE D +W
Sbjct: 475 ENIKQALMRNSTDAMKDSRVLDLLVSLNALQYRRMDFEEFCAAALSVHQLEALD--RWEQ 532
Query: 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSID--PLLEEADIDKDGRISLSEFRRLLRT 556
++ A++ F+ D + I EEL GL SI +L + DG++S + +LL
Sbjct: 533 HARCAYDLFEKDGNRAIMIEELASELGLGPSIPVHAVLHDWIRHTDGKLSFLGYVKLLHG 592
Query: 557 AS 558
S
Sbjct: 593 VS 594
|
Daucus carota (taxid: 4039) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/471 (46%), Positives = 311/471 (66%), Gaps = 33/471 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D Y++GK LG GQFG T++ T KA G + A K I K K++ +EDV+REV+I+
Sbjct: 67 EDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKLVNKEDIEDVRREVQIMH 126
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
L G N+V+ A+ED + V++ MELC GGEL DRI+AK Y
Sbjct: 127 HLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAK-----------------GHY 169
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+E+ AA ++R ++++ CH G++HRD+KPENFL + E+S LKATDFGLS F KPG+
Sbjct: 170 SERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGE 229
Query: 272 KFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
F+DIVGSAYY+APEVLKRK GPE+D+WSIGV+ YILLCG PFW ++E+GIF +LR
Sbjct: 230 VFKDIVGSAYYIAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRGH 289
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNN 391
DF PWPSIS AKD VKK+L DP+ RLTAAQ L+HPW++E G+A ++P+D +V++
Sbjct: 290 VDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSR 349
Query: 392 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 451
++QF + K+ ALR +A L +EE+ L++ F +D D +G+I+LEE+RQ LAK
Sbjct: 350 LKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQ-GT 408
Query: 452 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 511
+L E V ++++A D + +G +D+ EF+AAT+H+++L+ + HL S AF+ FD D
Sbjct: 409 RLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREE----HLYS--AFQHFDKDN 462
Query: 512 DGFITPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
G+IT EEL M+ G I ++ E D D DGRI+ EF ++R
Sbjct: 463 SGYITMEELEQALREFGMNDGR--DIKEIISEVDGDNDGRINYDEFVAMMR 511
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FX86|CAMK8_ARATH CDPK-related kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/529 (45%), Positives = 320/529 (60%), Gaps = 23/529 (4%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFD 95
R H + H + + K L T ++ G FG+ K+F
Sbjct: 88 RRAFHPPSPAKHIRAALRRRKGKKEAALSGVTQLTTEVPQREEEEEVGLDKRFGFSKEFH 147
Query: 96 RRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
R +G+ +G G FGYT A K G VAVK I K+KM IA+EDV+REVKILQA
Sbjct: 148 SRVELGEEIGRGHFGYTCSAKFKKGELKGQVVAVKIIPKSKMTTAIAIEDVRREVKILQA 207
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
L+GH+N+V+FY+AFED+ VYIAMELCEGGELLDRILA+ +Y+
Sbjct: 208 LSGHKNLVQFYDAFEDNANVYIAMELCEGGELLDRILAR----------------GGKYS 251
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E DA V+ Q+L V A CH G+VHRD+KPENFL+ S +E+S LKA DFGLSDF++P ++
Sbjct: 252 ENDAKPVIIQILNVVAFCHFQGVVHRDLKPENFLYTSKEENSQLKAIDFGLSDFVRPDER 311
Query: 273 FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
DIVGSAYYVAPEVL R E+DVWSIGVI YILLCG RPFW +TE GIF+ VL+ P
Sbjct: 312 LNDIVGSAYYVAPEVLHRSYTTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADP 371
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNM 392
F PWP +S+ AKDFVK+LL KDPR R++A+QAL HPW+R IP DI + M
Sbjct: 372 SFDEPPWPFLSSDAKDFVKRLLFKDPRRRMSASQALMHPWIRAYNTDMNIPFDILIFRQM 431
Query: 393 RQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 452
+ +++ S L++ ALRAL+ TL +E+ L+ QF + +K+G I+++ +R ALA +
Sbjct: 432 KAYLRSSSLRKAALRALSKTLIKDEILYLKTQFSLLAPNKDGLITMDTIRMALASNATEA 491
Query: 453 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 512
+KESR+ E L ++ +DF EF AA ++VHQ E D W + A+E FD + +
Sbjct: 492 MKESRIPEFLALLNGLQYRGMDFEEFCAAAINVHQHESLDC--WEQSIRHAYELFDKNGN 549
Query: 513 GFITPEELRMHTGLKGSID--PLLEEADIDKDGRISLSEFRRLLRTASI 559
I EEL G+ SI +L + DG++S F +LL S+
Sbjct: 550 RAIVIEELASELGVGPSIPVHSVLHDWIRHTDGKLSFFGFVKLLHGVSV 598
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49717|CDPKF_ARATH Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/521 (43%), Positives = 328/521 (62%), Gaps = 37/521 (7%)
Query: 45 TTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFD---RRYTIG 101
TT + H HQ+ +K Q K+H T + + T+ K F+ + YT+G
Sbjct: 50 TTTQSNHHHQQESKPVNQQIEKKHVLTQPLKPI----VFRETETILGKPFEEIRKLYTLG 105
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG TY + + G+ A K I K K+ ++DVKRE++I+Q L+G EN+V+
Sbjct: 106 KELGRGQFGITYTCKENSTGNTYACKSILKRKLTRKQDIDDVKREIQIMQYLSGQENIVE 165
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
A+ED +++ MELC G EL DRI+A+ Y+EK AA V+R
Sbjct: 166 IKGAYEDRQSIHLVMELCGGSELFDRIIAQ-----------------GHYSEKAAAGVIR 208
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
+L V CH G++HRD+KPENFL S E++ LKATDFGLS FI+ GK ++DIVGSAY
Sbjct: 209 SVLNVVQICHFMGVIHRDLKPENFLLASTDENAMLKATDFGLSVFIEEGKVYRDIVGSAY 268
Query: 282 YVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
YVAPEVL+R G E D+WS G+I YILLCG PFW +TE GIF E+++ + DF +PWPS
Sbjct: 269 YVAPEVLRRSYGKEIDIWSAGIILYILLCGVPPFWSETEKGIFNEIIKGEIDFDSQPWPS 328
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRL 401
IS SAKD V+KLL KDP+ R++AAQAL HPW+R GG+A + PID +VL+ M+QF ++L
Sbjct: 329 ISESAKDLVRKLLTKDPKQRISAAQALEHPWIR-GGEAPDKPIDSAVLSRMKQFRAMNKL 387
Query: 402 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEI 461
K+ AL+ +A +L +EE+ L+ F +D DK+G+I+ EE++ LAK L KL E+ V ++
Sbjct: 388 KKLALKVIAESLSEEEIKGLKTMFANMDTDKSGTITYEELKNGLAK-LGSKLTEAEVKQL 446
Query: 462 LQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL- 520
++A D + +G +D+ EF++AT+H ++ + + H+ AF+ FD D GFIT +EL
Sbjct: 447 MEAADVDGNGTIDYIEFISATMHRYRFDRDE----HVFK--AFQYFDKDNSGFITMDELE 500
Query: 521 ----RMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTA 557
G + SI ++ E D D DGRI+ EF ++R+
Sbjct: 501 SAMKEYGMGDEASIKEVIAEVDTDNDGRINYEEFCAMMRSG 541
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q3E9C0|CDPKY_ARATH Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/488 (45%), Positives = 315/488 (64%), Gaps = 38/488 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D YT+GK LG GQFG T++ T KA G + A K I K K++ +EDV+REV+I+
Sbjct: 62 EDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKLVNKEDIEDVRREVQIMH 121
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
L G N+V+ A+ED + V++ MELC GGEL DRI+AK Y
Sbjct: 122 HLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAK-----------------GHY 164
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+E+ AA ++R ++++ CH G++HRD+KPENFL S E+S LKATDFGLS F KPG+
Sbjct: 165 SERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGE 224
Query: 272 KFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
F+DIVGSAYY+APEVL+RK GPE+D+WSIGV+ YILLCG PFW ++E+GIF +L +
Sbjct: 225 VFKDIVGSAYYIAPEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSGQ 284
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNN 391
DF PWP IS AKD V+K+L DP+ RLTAAQ L+HPW++E G+A ++P+D +V++
Sbjct: 285 VDFSSDPWPVISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSR 344
Query: 392 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 451
++QF + K+ ALR +A L +EE+ L++ F +D D +G+I+LEE+RQ LAK
Sbjct: 345 LKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQ-GT 403
Query: 452 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 511
+L E V ++++A D + +G +D+ EF+AAT+H+++L+ + HL S AF+ FD D
Sbjct: 404 RLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREE----HLYS--AFQHFDKDN 457
Query: 512 DGFITPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 564
G+IT EEL M+ G I ++ E D D DGRI+ EF ++R N
Sbjct: 458 SGYITTEELEQALREFGMNDGR--DIKEIISEVDGDNDGRINYEEFVAMMRKG-----NP 510
Query: 565 PPSPSGHR 572
P+P R
Sbjct: 511 DPNPKKRR 518
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q38870|CDPK2_ARATH Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/472 (47%), Positives = 307/472 (65%), Gaps = 28/472 (5%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
++F Y++G+ LG GQFG T++ +K G+ A K I K K++ VEDV+RE++I+
Sbjct: 180 ENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLLTDEDVEDVRREIQIMH 239
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
LAGH NV+ A+ED V++ MELC GGEL DRI+ + Y
Sbjct: 240 HLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQR-----------------GHY 282
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
TE+ AA + R ++ V CH G++HRD+KPENFLF S +EDS LK DFGLS F KP +
Sbjct: 283 TERKAAELARTIVGVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFFKPDE 342
Query: 272 KFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
F D+VGS YYVAPEVL+++ GPESDVWS GVI YILL G PFW +TE GIF++VL
Sbjct: 343 VFTDVVGSPYYVAPEVLRKRYGPESDVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGD 402
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNN 391
DF PWPSIS SAKD V+K+LV+DP+ RLTA Q L HPWV+ G A + P+D +VL+
Sbjct: 403 LDFSSDPWPSISESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLSR 462
Query: 392 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 451
M+QF ++ K+ ALR +A +L +EE+A L+ F ID D +G I+ EE++ L K +
Sbjct: 463 MKQFSAMNKFKKMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGL-KRVGA 521
Query: 452 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 511
LKES +L+++QA D + G +D+ EF+AATLH++++E D HL AAF FD D
Sbjct: 522 NLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFSYFDKDE 575
Query: 512 DGFITPEELRMHT---GLKGS-IDPLLEEADIDKDGRISLSEFRRLLRTASI 559
GFITP+EL+ G++ + I+ ++ + D DKDGRI +EF +++ SI
Sbjct: 576 SGFITPDELQQACEEFGVEDARIEEMMRDVDQDKDGRIDYNEFVAMMQKGSI 627
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 577 | ||||||
| 225431134 | 558 | PREDICTED: calcium-dependent protein kin | 0.954 | 0.987 | 0.809 | 0.0 | |
| 224134094 | 556 | calcium dependent protein kinase 18 [Pop | 0.960 | 0.996 | 0.803 | 0.0 | |
| 449434158 | 543 | PREDICTED: calcium-dependent protein kin | 0.935 | 0.994 | 0.836 | 0.0 | |
| 255561295 | 575 | calcium-dependent protein kinase, putati | 0.845 | 0.848 | 0.896 | 0.0 | |
| 224074263 | 557 | calcium dependent protein kinase 16 [Pop | 0.961 | 0.996 | 0.806 | 0.0 | |
| 395863620 | 550 | CDPK1 [Fragaria vesca] | 0.901 | 0.945 | 0.833 | 0.0 | |
| 350538611 | 565 | calcium-dependent protein kinase [Solanu | 0.878 | 0.897 | 0.834 | 0.0 | |
| 147789502 | 534 | hypothetical protein VITISV_019799 [Viti | 0.920 | 0.994 | 0.787 | 0.0 | |
| 16904224 | 572 | calcium-dependent protein kinase CPK4 [N | 0.928 | 0.937 | 0.805 | 0.0 | |
| 325683724 | 552 | calcium-dependent protein kinase [Fragar | 0.956 | 1.0 | 0.798 | 0.0 |
| >gi|225431134|ref|XP_002267099.1| PREDICTED: calcium-dependent protein kinase 16 [Vitis vinifera] gi|297735013|emb|CBI17375.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/584 (80%), Positives = 507/584 (86%), Gaps = 33/584 (5%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQH---QHQERA 57
MG CLS TKV SNS + N A A + + T++K+Q Q +R
Sbjct: 1 MGACLSATKVRSSNSNTTANAA----------ATKNTRPRGSSKTSNKNQQKKPQEGDRN 50
Query: 58 KNYQQLKTKQHQKT----NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTY 113
++ QQ + Q QK N RR TG+IPCGKRTDFGY KDFD RYTIGKLLGHGQFGYTY
Sbjct: 51 RSNQQHRNPQPQKVKDRANGRRGTGIIPCGKRTDFGYAKDFDARYTIGKLLGHGQFGYTY 110
Query: 114 VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173
VATDKANGDRVAVK+IEKNKMILPIAVEDVKREVKIL+AL GHENVV+F+NAFEDD+YVY
Sbjct: 111 VATDKANGDRVAVKRIEKNKMILPIAVEDVKREVKILEALTGHENVVQFHNAFEDDSYVY 170
Query: 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH 233
I MELCEGGELLDRILAK KDSRY+EKDAA VVRQML+VAAECHLH
Sbjct: 171 IVMELCEGGELLDRILAK---------------KDSRYSEKDAAKVVRQMLKVAAECHLH 215
Query: 234 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSG 293
GLVHRDMKPENFLFKS KEDS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSG
Sbjct: 216 GLVHRDMKPENFLFKSTKEDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSG 275
Query: 294 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 353
PESDVWSIGVITYILLCG+RPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISN AKDFVKKL
Sbjct: 276 PESDVWSIGVITYILLCGKRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNGAKDFVKKL 335
Query: 354 LVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTL 413
LVKDPRARLTAAQALSHPWVREGGDASEIPIDISVL+NMR+FVKYS LKQFALRALASTL
Sbjct: 336 LVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLSNMREFVKYSHLKQFALRALASTL 395
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK+KESRVLEILQAID NTDGLV
Sbjct: 396 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGLV 455
Query: 474 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPL 533
DF+EFVAATLHVHQLEEHDS+KW RSQAAF+KFD+DRDGFITPEEL++HTGL+GSIDPL
Sbjct: 456 DFTEFVAATLHVHQLEEHDSDKWRQRSQAAFDKFDVDRDGFITPEELKLHTGLRGSIDPL 515
Query: 534 LEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 577
LEEADIDKDGRISL+EFRRLLRTASISSR V PS SG RNPRK+
Sbjct: 516 LEEADIDKDGRISLAEFRRLLRTASISSRQV-PSSSGFRNPRKI 558
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134094|ref|XP_002327754.1| calcium dependent protein kinase 18 [Populus trichocarpa] gi|222836839|gb|EEE75232.1| calcium dependent protein kinase 18 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/579 (80%), Positives = 498/579 (86%), Gaps = 25/579 (4%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHK--HQHQHQERAK 58
MG C ST KVSGSNS NNN H R + + + H HQ+ +
Sbjct: 1 MGACFSTIKVSGSNS---NNNVIHSRKEPTKPQTKTTKATTATRKKQEVVHHHQNNKNVN 57
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
N + K K +K +S+ IPCGKRTDFGYDKDFD RYTIGKLLGHGQFGYTYVA DK
Sbjct: 58 NEAEKKLKVKEKQSSK----AIPCGKRTDFGYDKDFDMRYTIGKLLGHGQFGYTYVAIDK 113
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178
ANGDRVAVK+IEKNKM+LPIAVEDVKREVKIL+ L GHENVV+FYNA EDD+YVYI MEL
Sbjct: 114 ANGDRVAVKRIEKNKMVLPIAVEDVKREVKILRELTGHENVVQFYNALEDDSYVYIVMEL 173
Query: 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 238
CEGGELLDRIL+K KDSRYTEKDAAVVVRQML+VAAECHLHGLVHR
Sbjct: 174 CEGGELLDRILSK---------------KDSRYTEKDAAVVVRQMLKVAAECHLHGLVHR 218
Query: 239 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDV 298
DMKPENFLFKS K DS LKATDFGLSDFIKPG+KFQDIVGSAYYVAPEVLKRKSGPESDV
Sbjct: 219 DMKPENFLFKSTKGDSPLKATDFGLSDFIKPGRKFQDIVGSAYYVAPEVLKRKSGPESDV 278
Query: 299 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 358
WSIGVITYILLCGRRPFWDKTEDGIFKEVL+NKPDFRRKPWP+IS SAKDFV KLLVKDP
Sbjct: 279 WSIGVITYILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISTSAKDFVNKLLVKDP 338
Query: 359 RARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEEL 418
RARLTAAQALSHPWVREGG ASEIPIDISVL+NMRQFVKYSRLKQFALRALAST+D+EEL
Sbjct: 339 RARLTAAQALSHPWVREGGVASEIPIDISVLSNMRQFVKYSRLKQFALRALASTIDEEEL 398
Query: 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEF 478
ADL+DQFDAIDVDKNG+ISLEEMRQALAKDLPWKLKESRVLEI+QAID NTDGLVDF+EF
Sbjct: 399 ADLKDQFDAIDVDKNGAISLEEMRQALAKDLPWKLKESRVLEIVQAIDSNTDGLVDFTEF 458
Query: 479 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 538
VAA LHVHQL+EH+SEKW LRSQAAFEKFDIDRDG+ITPEELRMHTGL+GSIDPLLEEAD
Sbjct: 459 VAAALHVHQLQEHNSEKWQLRSQAAFEKFDIDRDGYITPEELRMHTGLRGSIDPLLEEAD 518
Query: 539 IDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 577
IDKDG+ISLSEFRRLLRTAS+SSRNV PSPSGHR K+
Sbjct: 519 IDKDGKISLSEFRRLLRTASMSSRNV-PSPSGHRKSHKI 556
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449434158|ref|XP_004134863.1| PREDICTED: calcium-dependent protein kinase 28-like [Cucumis sativus] gi|449491358|ref|XP_004158870.1| PREDICTED: calcium-dependent protein kinase 28-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/562 (83%), Positives = 496/562 (88%), Gaps = 22/562 (3%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNY 60
MG+C S +KVSGSNS +NN NHHR + + + DT+ + + +N
Sbjct: 1 MGVCFSASKVSGSNSNTNNTVVNHHRRGSTANPQ-----PSTTDTSQNQKRPNDNPKRNS 55
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
QQLK K+ K SRRQ+GVIPCGKRTDFGY K+FD RYTIGKLLGHGQFGYTYVA DK N
Sbjct: 56 QQLKIKE--KNVSRRQSGVIPCGKRTDFGYHKNFDERYTIGKLLGHGQFGYTYVAIDKGN 113
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
GDRVAVKKIEKNKMILPIAVEDVKREVKILQ L GHENVV+F+NAFEDD+YVYI MELCE
Sbjct: 114 GDRVAVKKIEKNKMILPIAVEDVKREVKILQELTGHENVVQFHNAFEDDSYVYIVMELCE 173
Query: 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 240
GGELLDRIL+K KDSRYTEKDAAVVVRQML+VAAECHLHGLVHRD+
Sbjct: 174 GGELLDRILSK---------------KDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDL 218
Query: 241 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWS 300
KPENFLFKSAKEDS LKATDFGLSDFIKPGKKF DIVGSAYYVAPEVLKRKSGPESDVWS
Sbjct: 219 KPENFLFKSAKEDSHLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPESDVWS 278
Query: 301 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 360
IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS SAKDF+KKLLVKDPRA
Sbjct: 279 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISPSAKDFIKKLLVKDPRA 338
Query: 361 RLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELAD 420
RLTAAQALSH WVREGGDASEIPIDISVL+NMRQFVKYSRLKQFALRALAST+ +EELAD
Sbjct: 339 RLTAAQALSHRWVREGGDASEIPIDISVLSNMRQFVKYSRLKQFALRALASTIGEEELAD 398
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 480
LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID NTDGLVDF+EFVA
Sbjct: 399 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDVNTDGLVDFTEFVA 458
Query: 481 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADID 540
ATLHVHQLEEHDS KW RSQAAFEKFDID+DGFITPEELRMHTGLKGSIDPLLEEADID
Sbjct: 459 ATLHVHQLEEHDSVKWQQRSQAAFEKFDIDKDGFITPEELRMHTGLKGSIDPLLEEADID 518
Query: 541 KDGRISLSEFRRLLRTASISSR 562
KDG+ISLSEFRRLLRTASISSR
Sbjct: 519 KDGKISLSEFRRLLRTASISSR 540
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255561295|ref|XP_002521658.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223539049|gb|EEF40645.1| calcium-dependent protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/504 (89%), Positives = 471/504 (93%), Gaps = 16/504 (3%)
Query: 74 RRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK 133
RR GVIPCGKRTDFGY KDFD+RY+IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK
Sbjct: 88 RRPGGVIPCGKRTDFGYAKDFDKRYSIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK 147
Query: 134 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMI 193
M+LPIAVEDVKREVKILQ LAGHENVV FYNAFEDD++VYI MELCEGGELLDRIL
Sbjct: 148 MVLPIAVEDVKREVKILQELAGHENVVHFYNAFEDDSFVYIVMELCEGGELLDRIL---- 203
Query: 194 STTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253
++KDSRYTEKDAAV+VRQML+VAAECHLHGLVHRDMKPENFLFKS K+D
Sbjct: 204 -----------LKKDSRYTEKDAAVIVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKDD 252
Query: 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRR 313
S LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR+SGPESDVWSIGVITYILLCGRR
Sbjct: 253 SPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRR 312
Query: 314 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
PFWDKTEDGIFKEVLRNKPDFRRKPWPSIS+SAKDFVKKLLVKDPR RLTAAQALSHPWV
Sbjct: 313 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISSSAKDFVKKLLVKDPRVRLTAAQALSHPWV 372
Query: 374 REGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKN 433
REGG+ASEIPIDISVLNNMRQFVKYSR KQFALRALASTLDDEEL+DLRDQFDAIDVDKN
Sbjct: 373 REGGNASEIPIDISVLNNMRQFVKYSRFKQFALRALASTLDDEELSDLRDQFDAIDVDKN 432
Query: 434 GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 493
GSISLEEMRQALAKDLPWKLKESRVLEILQAID NTDGLVDFSEFVAA LHVHQLEEH+S
Sbjct: 433 GSISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFSEFVAAALHVHQLEEHNS 492
Query: 494 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRL 553
EKW RSQAAFEKFDID+DGFIT EELRMHTGL+GSIDPLLEEADIDKDG+ISLSEFRRL
Sbjct: 493 EKWQHRSQAAFEKFDIDKDGFITSEELRMHTGLRGSIDPLLEEADIDKDGKISLSEFRRL 552
Query: 554 LRTASISSRNVPPSPSGHRNPRKL 577
LRTASISSRN PSPSGHRN RK+
Sbjct: 553 LRTASISSRNA-PSPSGHRNSRKM 575
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224074263|ref|XP_002304327.1| calcium dependent protein kinase 16 [Populus trichocarpa] gi|222841759|gb|EEE79306.1| calcium dependent protein kinase 16 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/579 (80%), Positives = 504/579 (87%), Gaps = 24/579 (4%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHAR--NDTTHKHQHQHQERAK 58
MG C ST +SGSNS +NN ANH+R + R R + H H HQ +
Sbjct: 1 MGACFSTINISGSNS-NNNTKANHNRKEPTKPQTRTTKAATRKKQEVVH-HHHQINKNVN 58
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
N + K K +K +S+ IPCGKRTDFGYDKDFD RYTIGKLLGHGQFGYTYVATDK
Sbjct: 59 NEAEKKLKVKEKQSSK----AIPCGKRTDFGYDKDFDIRYTIGKLLGHGQFGYTYVATDK 114
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178
NGDRVAVK+I+KNKM+LPIAVEDVKREV+ILQ L GHENVV+F+NAFEDD+YVYI MEL
Sbjct: 115 GNGDRVAVKRIDKNKMVLPIAVEDVKREVRILQELTGHENVVQFHNAFEDDSYVYIVMEL 174
Query: 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 238
CEGGELLDRILAK KDSRYTEKDAAVVVRQML+VAAECHLHGLVHR
Sbjct: 175 CEGGELLDRILAK---------------KDSRYTEKDAAVVVRQMLKVAAECHLHGLVHR 219
Query: 239 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDV 298
DMKPENFLFKS KEDS LKATDFGLSDFIKPG+KF+DIVGSAYYVAPEVLKR SGPESDV
Sbjct: 220 DMKPENFLFKSTKEDSPLKATDFGLSDFIKPGRKFKDIVGSAYYVAPEVLKRNSGPESDV 279
Query: 299 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 358
WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP+IS SAKDFV+KLLVKDP
Sbjct: 280 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISTSAKDFVQKLLVKDP 339
Query: 359 RARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEEL 418
RARLTAAQALSHPWVREGGDASEIPIDISVL+NMRQFVKYSRLKQFALRALAST+D+EEL
Sbjct: 340 RARLTAAQALSHPWVREGGDASEIPIDISVLSNMRQFVKYSRLKQFALRALASTIDEEEL 399
Query: 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEF 478
ADL+DQFDAIDVDKNG+ISLEEMRQALAKDLPWKLKES VLEI+QAID NTDGLVDF+EF
Sbjct: 400 ADLKDQFDAIDVDKNGAISLEEMRQALAKDLPWKLKESLVLEIVQAIDSNTDGLVDFTEF 459
Query: 479 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 538
VAA LHVHQLEEH+SEKW LRSQAAFEKFDIDRDG+ITPEELRMH+GL+GS+DPLLEEAD
Sbjct: 460 VAAALHVHQLEEHNSEKWQLRSQAAFEKFDIDRDGYITPEELRMHSGLRGSVDPLLEEAD 519
Query: 539 IDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 577
IDKDGRISLSEFRRLLRTAS+SS+NV P PSGHRN +KL
Sbjct: 520 IDKDGRISLSEFRRLLRTASMSSQNV-PDPSGHRNSKKL 557
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|395863620|gb|AFN80337.1| CDPK1 [Fragaria vesca] | Back alignment and taxonomy information |
|---|
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/536 (83%), Positives = 479/536 (89%), Gaps = 16/536 (2%)
Query: 42 RNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIG 101
R TT Q N Q K K K +SR++TGVIPCGKRTDFGYDK+FDRRYTIG
Sbjct: 31 RKQTTRPQPAQTNHHRPNEAQKKNKHKSKQSSRQKTGVIPCGKRTDFGYDKNFDRRYTIG 90
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLGHGQFGYTYVATD++NGDRVAVK I+KNKMILPIAVEDVKREV+ILQALAGHENVV+
Sbjct: 91 KLLGHGQFGYTYVATDRSNGDRVAVKGIDKNKMILPIAVEDVKREVEILQALAGHENVVQ 150
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
F+NA EDD YVYI MELCEGGELLDRIL K KDSRYTEKDAAVVVR
Sbjct: 151 FFNACEDDTYVYIVMELCEGGELLDRILEK---------------KDSRYTEKDAAVVVR 195
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
QML+VAAECHLHGLVHRDMKPENFLFKS DS LKATDFGLSDFIKPGKKFQDIVGSAY
Sbjct: 196 QMLKVAAECHLHGLVHRDMKPENFLFKSKALDSPLKATDFGLSDFIKPGKKFQDIVGSAY 255
Query: 282 YVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
YVAPEVL+RKSGPESDVWSIGVI+YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP+
Sbjct: 256 YVAPEVLRRKSGPESDVWSIGVISYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPT 315
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRL 401
ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS+IPIDISVLNNMRQFV+YSRL
Sbjct: 316 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASDIPIDISVLNNMRQFVRYSRL 375
Query: 402 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEI 461
KQFALRALASTL+ EELADL+DQFDAIDVDKNGSISLEEMRQALAKD+PWKLK+SRV+EI
Sbjct: 376 KQFALRALASTLNAEELADLKDQFDAIDVDKNGSISLEEMRQALAKDIPWKLKDSRVVEI 435
Query: 462 LQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 521
L+AID NTDGLVDF+EFVAATLHVHQLEEHDSEKW S+AAFEKFDIDRDG+ITP+ELR
Sbjct: 436 LEAIDSNTDGLVDFTEFVAATLHVHQLEEHDSEKWQQLSRAAFEKFDIDRDGYITPDELR 495
Query: 522 MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 577
MHTGLKGSIDPLL+EADIDKDG+ISLSEFRRLLRTAS+S + V PSG RN R++
Sbjct: 496 MHTGLKGSIDPLLDEADIDKDGKISLSEFRRLLRTASMSPQKV-ADPSGQRNSRQV 550
|
Source: Fragaria vesca Species: Fragaria vesca Genus: Fragaria Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350538611|ref|NP_001234607.1| calcium-dependent protein kinase [Solanum lycopersicum] gi|241994912|gb|ACS74732.1| calcium-dependent protein kinase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/527 (83%), Positives = 476/527 (90%), Gaps = 20/527 (3%)
Query: 38 NHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRR 97
N D + +Q Q++ +N QQ + K +SRRQ GVIPCGKRTDFGY KDF++R
Sbjct: 53 NQEGCRDKGNINQKNQQKQPRNSQQ-----NVKPSSRRQGGVIPCGKRTDFGYHKDFEKR 107
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
YTIGKLLGHGQFGYTYVATDK++GDRVAVK+IEKNKM+LPIAVEDVKREVKIL+AL GHE
Sbjct: 108 YTIGKLLGHGQFGYTYVATDKSSGDRVAVKRIEKNKMVLPIAVEDVKREVKILKALGGHE 167
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
NVV+FYN+FEDDNYVYI MELCEGGELLDRIL+K KDSRYTEKDAA
Sbjct: 168 NVVQFYNSFEDDNYVYIVMELCEGGELLDRILSK---------------KDSRYTEKDAA 212
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+VVRQML+VAAECHLHGLVHRDMKPENFLFKS KEDS LKATDFGLSDFI+PGKKFQDIV
Sbjct: 213 IVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKEDSPLKATDFGLSDFIRPGKKFQDIV 272
Query: 278 GSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 337
GSAYYVAPEVLKR+SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK
Sbjct: 273 GSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 332
Query: 338 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 397
PW +ISNSAKDFVKK+LVKDPRARLTAAQALSHPWVREGGDASEIP+DISVL+NMRQFVK
Sbjct: 333 PWSNISNSAKDFVKKILVKDPRARLTAAQALSHPWVREGGDASEIPLDISVLSNMRQFVK 392
Query: 398 YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR 457
YSRLKQFALRALASTLD+EE+ADLRDQF AIDVDKNG ISLEEMRQALAKDLPWK+KESR
Sbjct: 393 YSRLKQFALRALASTLDEEEIADLRDQFSAIDVDKNGVISLEEMRQALAKDLPWKMKESR 452
Query: 458 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITP 517
VLEILQAID NTDGLVDF EFVAATLHVHQLEEH+S KW RSQAAFEKFD+D+DGFITP
Sbjct: 453 VLEILQAIDSNTDGLVDFPEFVAATLHVHQLEEHNSTKWQQRSQAAFEKFDVDKDGFITP 512
Query: 518 EELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 564
EEL+MHTGL+GSIDPLLEEADIDKDG+IS+SEFRRLLRTAS+SS V
Sbjct: 513 EELKMHTGLRGSIDPLLEEADIDKDGKISISEFRRLLRTASMSSPTV 559
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147789502|emb|CAN69589.1| hypothetical protein VITISV_019799 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/580 (78%), Positives = 490/580 (84%), Gaps = 49/580 (8%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQH---QHQERA 57
MG CLS TKV SNS + N A A + + T++K+Q Q +R
Sbjct: 1 MGACLSATKVRSSNSNTTANAA----------ATKNTRPRGSSKTSNKNQQKKPQEGDRN 50
Query: 58 KNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATD 117
++ QQ + Q QK KDFD RYTIGKLLGHGQFGYTYVATD
Sbjct: 51 RSNQQHRNPQPQKA--------------------KDFDARYTIGKLLGHGQFGYTYVATD 90
Query: 118 KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177
KANGDRVAVK+IEKNKMILPIAVEDVKREVKIL+AL GHENVV+F+NAFEDD+YVYI ME
Sbjct: 91 KANGDRVAVKRIEKNKMILPIAVEDVKREVKILEALTGHENVVQFHNAFEDDSYVYIVME 150
Query: 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 237
LCEGGELLDRILAK KDSRY+EKDAA VVRQML+VAAECHLHGLVH
Sbjct: 151 LCEGGELLDRILAK---------------KDSRYSEKDAAKVVRQMLKVAAECHLHGLVH 195
Query: 238 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESD 297
RDMKPENFLFKS KEDS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSGPESD
Sbjct: 196 RDMKPENFLFKSTKEDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGPESD 255
Query: 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357
VWSIGVITYILLCG+RPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISN AKDFVKKLLVKD
Sbjct: 256 VWSIGVITYILLCGKRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNGAKDFVKKLLVKD 315
Query: 358 PRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEE 417
PRARLTAAQALSHPWVREGGDASEIPIDISVL+NMR+FVKYS LKQFALRALASTLDDEE
Sbjct: 316 PRARLTAAQALSHPWVREGGDASEIPIDISVLSNMREFVKYSHLKQFALRALASTLDDEE 375
Query: 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 477
LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK+KESRVLEILQAID NTDGLVDF+E
Sbjct: 376 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGLVDFTE 435
Query: 478 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEA 537
FVAATLHVHQLEEHDS+KW RSQAAF+KFD+DRDGFITPEEL++HTGL+GSIDPLLEEA
Sbjct: 436 FVAATLHVHQLEEHDSDKWRQRSQAAFDKFDVDRDGFITPEELKLHTGLRGSIDPLLEEA 495
Query: 538 DIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 577
DIDKDGRISL+EFRRLLRTASISSR V PS SG RNPRK+
Sbjct: 496 DIDKDGRISLAEFRRLLRTASISSRQV-PSSSGFRNPRKI 534
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|16904224|gb|AAL30819.1|AF435451_1 calcium-dependent protein kinase CPK4 [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/555 (80%), Positives = 484/555 (87%), Gaps = 19/555 (3%)
Query: 20 NNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQ-TG 78
N AN + K+ +H + H+ QHQ++ Q K+H N RRQ +G
Sbjct: 33 NKANPPSTSTITSTKQEGSHCNKQKVKDNHKSQHQKQQPRNSQQNVKKH--NNGRRQKSG 90
Query: 79 VIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI 138
VI CGKRTDFGYDKDFD+R+TIGKLLGHGQFGYTYVAT K+NGDRVAVK+IEKNKM+LPI
Sbjct: 91 VIACGKRTDFGYDKDFDKRFTIGKLLGHGQFGYTYVATHKSNGDRVAVKRIEKNKMVLPI 150
Query: 139 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLT 198
AVEDVKREVKIL+AL+GHENVV+F NAFEDDNYVYI MELCEGGELLDRILAK
Sbjct: 151 AVEDVKREVKILKALSGHENVVQFNNAFEDDNYVYIVMELCEGGELLDRILAK------- 203
Query: 199 SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258
KDSRY EKDAA+VVRQML+ AA+CHLHGLVHRDMKPENFLFKS+KEDS LKA
Sbjct: 204 --------KDSRYAEKDAAIVVRQMLKEAAQCHLHGLVHRDMKPENFLFKSSKEDSPLKA 255
Query: 259 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDK 318
TDFGLSDFI+PGKKFQDIVGSAYYVAPEVLKR+SGPESD WSIGVITYILLCGRR FWDK
Sbjct: 256 TDFGLSDFIRPGKKFQDIVGSAYYVAPEVLKRRSGPESDEWSIGVITYILLCGRRRFWDK 315
Query: 319 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378
TEDGIFKEVLRNKPDFRRKPWP+ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD
Sbjct: 316 TEDGIFKEVLRNKPDFRRKPWPTISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375
Query: 379 ASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISL 438
ASEIP+DISVL+NMRQFVKYSRLKQFALRALAST+D+EELAD+RDQF AIDVDKNG ISL
Sbjct: 376 ASEIPLDISVLSNMRQFVKYSRLKQFALRALASTVDEEELADVRDQFSAIDVDKNGVISL 435
Query: 439 EEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498
EEMRQALAKDLPWK+KESRVLEILQAID N+DGL+DF EFVAATLHVHQLEEH+S KW
Sbjct: 436 EEMRQALAKDLPWKMKESRVLEILQAIDSNSDGLLDFPEFVAATLHVHQLEEHNSIKWQE 495
Query: 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 558
RSQAAFE+FD+DRDGFITPEELRMHTGLKGSIDPLLEEADIDKDG+ISLSEFRRLLRTAS
Sbjct: 496 RSQAAFEEFDVDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGKISLSEFRRLLRTAS 555
Query: 559 ISSRNV-PPSPSGHR 572
ISSR V P+ G R
Sbjct: 556 ISSRMVTSPTVRGSR 570
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|325683724|gb|ADZ44603.1| calcium-dependent protein kinase [Fragaria x ananassa] | Back alignment and taxonomy information |
|---|
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/577 (79%), Positives = 495/577 (85%), Gaps = 25/577 (4%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNY 60
MG CL+T KV+GSNS +N NN R TT Q N
Sbjct: 1 MGGCLTTAKVTGSNSNTNTNNNPATTTTAVVN---------RKQTTRPPPAQTNHHRANE 51
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
Q K K K +SR++TG+IPCGKRTDFGYDK+FDRRY IGKLLGHGQFGYTYV TD++N
Sbjct: 52 AQKKHKHKPKQSSRQKTGMIPCGKRTDFGYDKNFDRRYMIGKLLGHGQFGYTYVVTDRSN 111
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
GDRVAVK+I+KNKMILPIAVEDVKREVKILQALAGHENVV+FYNA EDD YVYI MELCE
Sbjct: 112 GDRVAVKRIDKNKMILPIAVEDVKREVKILQALAGHENVVQFYNACEDDTYVYIVMELCE 171
Query: 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 240
GGELLDRIL K KDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDM
Sbjct: 172 GGELLDRILEK---------------KDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDM 216
Query: 241 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWS 300
KPENFLFKS DS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSG ESDVWS
Sbjct: 217 KPENFLFKSKALDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGRESDVWS 276
Query: 301 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 360
IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP+ISNSAKDF KKLLVKDPRA
Sbjct: 277 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNSAKDFAKKLLVKDPRA 336
Query: 361 RLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELAD 420
RLTAAQALSHPWVREGGDAS+IPIDISVLNNMRQFV+YSRLKQFALRALASTL+ EELAD
Sbjct: 337 RLTAAQALSHPWVREGGDASDIPIDISVLNNMRQFVRYSRLKQFALRALASTLNAEELAD 396
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 480
L+DQFDAIDVDKNGSISLEEMRQALAKD+PWKLK+SRV+EIL+AID NTDGLVDF+EFVA
Sbjct: 397 LKDQFDAIDVDKNGSISLEEMRQALAKDIPWKLKDSRVVEILEAIDSNTDGLVDFTEFVA 456
Query: 481 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADID 540
ATLHVHQLEEHDSEKW S+AAFEKFDIDRDG+ITP+ELRMHTGLKGSIDPLL+EADID
Sbjct: 457 ATLHVHQLEEHDSEKWQQLSRAAFEKFDIDRDGYITPDELRMHTGLKGSIDPLLDEADID 516
Query: 541 KDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 577
KDG+ISLSEFRRLLRTAS+SS+ V SPSG RN R++
Sbjct: 517 KDGKISLSEFRRLLRTASMSSQKV-ASPSGQRNSRQV 552
|
Source: Fragaria x ananassa Species: Fragaria x ananassa Genus: Fragaria Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 577 | ||||||
| TAIR|locus:2827826 | 571 | CPK16 "AT2G17890" [Arabidopsis | 0.892 | 0.901 | 0.808 | 1.1e-224 | |
| TAIR|locus:2156947 | 523 | CPK28 "calcium-dependent prote | 0.849 | 0.936 | 0.818 | 2.5e-223 | |
| TAIR|locus:2177023 | 528 | CPK17 "calcium-dependent prote | 0.585 | 0.640 | 0.485 | 3.4e-113 | |
| TAIR|locus:2075885 | 646 | CPK2 "calmodulin-domain protei | 0.608 | 0.543 | 0.494 | 8.9e-113 | |
| TAIR|locus:2150225 | 523 | CPK34 "AT5G19360" [Arabidopsis | 0.606 | 0.669 | 0.465 | 3e-112 | |
| TAIR|locus:2128409 | 529 | CDPK6 "calcium-dependent prote | 0.585 | 0.638 | 0.485 | 1.3e-111 | |
| TAIR|locus:2175503 | 610 | CPK1 "calcium dependent protei | 0.610 | 0.577 | 0.490 | 7.1e-111 | |
| TAIR|locus:2015846 | 521 | CPK33 "calcium-dependent prote | 0.606 | 0.671 | 0.464 | 3e-110 | |
| TAIR|locus:2012232 | 606 | AT1G49580 [Arabidopsis thalian | 0.873 | 0.831 | 0.453 | 6.1e-110 | |
| TAIR|locus:2092399 | 541 | CPK9 "calmodulin-domain protei | 0.590 | 0.630 | 0.473 | 4.4e-109 |
| TAIR|locus:2827826 CPK16 "AT2G17890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2169 (768.6 bits), Expect = 1.1e-224, P = 1.1e-224
Identities = 435/538 (80%), Positives = 459/538 (85%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKT-------NSRRQTGVIPCGKRTDFGYDKDFDRRYT 99
H+ Q + AK T H K N RR IP GKR DFGY KDFD RYT
Sbjct: 50 HRTQPRRNATAKKTPTRHTPPHGKVREKVISNNGRRHGETIPYGKRVDFGYAKDFDHRYT 109
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
IGKLLGHGQFGYTYVATDK GDRVAVKKI+K KM +PIAVEDVKREVKILQAL GHENV
Sbjct: 110 IGKLLGHGQFGYTYVATDKKTGDRVAVKKIDKAKMTIPIAVEDVKREVKILQALTGHENV 169
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
V+FYNAFED N VYI MELCEGGELLDRILA RKDSRY+E+DAAVV
Sbjct: 170 VRFYNAFEDKNSVYIVMELCEGGELLDRILA---------------RKDSRYSERDAAVV 214
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 279
VRQML+VAAECHL GLVHRDMKPENFLFKS +EDS LKATDFGLSDFIKPGKKF DIVGS
Sbjct: 215 VRQMLKVAAECHLRGLVHRDMKPENFLFKSTEEDSPLKATDFGLSDFIKPGKKFHDIVGS 274
Query: 280 AYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
AYYVAPEVLKR+SGPESDVWSIGVI+YILLCGRRPFWDKTEDGIFKEVL+NKPDFRRKPW
Sbjct: 275 AYYVAPEVLKRRSGPESDVWSIGVISYILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPW 334
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYS 399
P+ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK+S
Sbjct: 335 PTISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKFS 394
Query: 400 RLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL 459
RLKQFALRALA+TLD+EELADLRDQFDAIDVDKNG ISLEEMRQALAKD PWKLK++RV
Sbjct: 395 RLKQFALRALATTLDEEELADLRDQFDAIDVDKNGVISLEEMRQALAKDHPWKLKDARVA 454
Query: 460 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 519
EILQAID NTDG VDF EFVAA LHV+QLEEHDSEKW RS+AAFEKFDID DGFIT EE
Sbjct: 455 EILQAIDSNTDGFVDFGEFVAAALHVNQLEEHDSEKWQQRSRAAFEKFDIDGDGFITAEE 514
Query: 520 LRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 577
LRMHTGLKGSI+PLLEEADID DG+ISL EFRRLLRTASI SRNV SP G+ RK+
Sbjct: 515 LRMHTGLKGSIEPLLEEADIDNDGKISLQEFRRLLRTASIKSRNVR-SPPGYLISRKV 571
|
|
| TAIR|locus:2156947 CPK28 "calcium-dependent protein kinase 28" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2156 (764.0 bits), Expect = 2.5e-223, P = 2.5e-223
Identities = 414/506 (81%), Positives = 461/506 (91%)
Query: 70 KTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI 129
K +++R+TG IPCGKRTDFGY KDF YTIGKLLGHGQFGYTYVA + NGDRVAVK++
Sbjct: 34 KASTKRRTGSIPCGKRTDFGYSKDFHDHYTIGKLLGHGQFGYTYVAIHRPNGDRVAVKRL 93
Query: 130 EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL 189
+K+KM+LPIAVEDVKREV+IL AL+GHENVV+F+NAFEDD+YVYI MELCEGGELLDRIL
Sbjct: 94 DKSKMVLPIAVEDVKREVQILIALSGHENVVQFHNAFEDDDYVYIVMELCEGGELLDRIL 153
Query: 190 AKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249
+K K +RY+EKDAAVVVRQML+VA ECHLHGLVHRDMKPENFLFKS
Sbjct: 154 SK---------------KGNRYSEKDAAVVVRQMLKVAGECHLHGLVHRDMKPENFLFKS 198
Query: 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILL 309
A+ DS LKATDFGLSDFIKPGK+F DIVGSAYYVAPEVLKR+SGPESDVWSIGVITYILL
Sbjct: 199 AQLDSPLKATDFGLSDFIKPGKRFHDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILL 258
Query: 310 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
CGRRPFWD+TEDGIFKEVLRNKPDF RKPW +IS+SAKDFVKKLLVKDPRARLTAAQALS
Sbjct: 259 CGRRPFWDRTEDGIFKEVLRNKPDFSRKPWATISDSAKDFVKKLLVKDPRARLTAAQALS 318
Query: 370 HPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAID 429
H WVREGG+A++IP+DISVLNN+RQFV+YSRLKQFALRALASTLD+ E++DLRDQFDAID
Sbjct: 319 HAWVREGGNATDIPVDISVLNNLRQFVRYSRLKQFALRALASTLDEAEISDLRDQFDAID 378
Query: 430 VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489
VDKNG ISLEEMRQALAKDLPWKLK+SRV EIL+AID NTDGLVDF+EFVAA LHVHQLE
Sbjct: 379 VDKNGVISLEEMRQALAKDLPWKLKDSRVAEILEAIDSNTDGLVDFTEFVAAALHVHQLE 438
Query: 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSE 549
EHDSEKW LRS+AAFEKFD+D+DG+ITPEELRMHTGL+GSIDPLL+EADID+DG+ISL E
Sbjct: 439 EHDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLRGSIDPLLDEADIDRDGKISLHE 498
Query: 550 FRRLLRTASISSRNVPPSPSGHRNPR 575
FRRLLRTASISS+ P SP+GHRN R
Sbjct: 499 FRRLLRTASISSQRAP-SPAGHRNLR 523
|
|
| TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 888 (317.7 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 170/350 (48%), Positives = 243/350 (69%)
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
Y+E+ AA ++R ++++ CH G++HRD+KPENFL + E+S LKATDFGLS F KPG
Sbjct: 169 YSERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPG 228
Query: 271 KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
+ F+DIVGSAYY+APEVLKRK GPE+D+WSIGV+ YILLCG PFW ++E+GIF +LR
Sbjct: 229 EVFKDIVGSAYYIAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRG 288
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN 390
DF PWPSIS AKD VKK+L DP+ RLTAAQ L+HPW++E G+A ++P+D +V++
Sbjct: 289 HVDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMS 348
Query: 391 NMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP 450
++QF + K+ ALR +A L +EE+ L++ F +D D +G+I+LEE+RQ LAK
Sbjct: 349 RLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQ-G 407
Query: 451 WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 510
+L E V ++++A D + +G +D+ EF+AAT+H+++L+ + HL S AF+ FD D
Sbjct: 408 TRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREE----HLYS--AFQHFDKD 461
Query: 511 RDGFITPEELRM---HTGLKGSID--PLLEEADIDKDGRISLSEFRRLLR 555
G+IT EEL G+ D ++ E D D DGRI+ EF ++R
Sbjct: 462 NSGYITMEELEQALREFGMNDGRDIKEIISEVDGDNDGRINYDEFVAMMR 511
|
|
| TAIR|locus:2075885 CPK2 "calmodulin-domain protein kinase cdpk isoform 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 887 (317.3 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
Identities = 179/362 (49%), Positives = 244/362 (67%)
Query: 202 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261
F I + YTE+ AA + R ++ V CH G++HRD+KPENFLF S +EDS LK DF
Sbjct: 273 FDRIIQRGHYTERKAAELARTIVGVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDF 332
Query: 262 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED 321
GLS F KP + F D+VGS YYVAPEVL+++ GPESDVWS GVI YILL G PFW +TE
Sbjct: 333 GLSMFFKPDEVFTDVVGSPYYVAPEVLRKRYGPESDVWSAGVIVYILLSGVPPFWAETEQ 392
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
GIF++VL DF PWPSIS SAKD V+K+LV+DP+ RLTA Q L HPWV+ G A +
Sbjct: 393 GIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPD 452
Query: 382 IPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEM 441
P+D +VL+ M+QF ++ K+ ALR +A +L +EE+A L+ F ID D +G I+ EE+
Sbjct: 453 KPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEEL 512
Query: 442 RQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 501
+ L K + LKES +L+++QA D + G +D+ EF+AATLH++++E D HL
Sbjct: 513 KAGL-KRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF-- 565
Query: 502 AAFEKFDIDRDGFITPEELRM---HTGLKGS-IDPLLEEADIDKDGRISLSEFRRLLRTA 557
AAF FD D GFITP+EL+ G++ + I+ ++ + D DKDGRI +EF +++
Sbjct: 566 AAFSYFDKDESGFITPDELQQACEEFGVEDARIEEMMRDVDQDKDGRIDYNEFVAMMQKG 625
Query: 558 SI 559
SI
Sbjct: 626 SI 627
|
|
| TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 878 (314.1 bits), Expect = 3.0e-112, Sum P(2) = 3.0e-112
Identities = 171/367 (46%), Positives = 247/367 (67%)
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
Y+E+ AA ++R ++++ CH G++HRD+KPENFL S E+S LKATDFGLS F KPG
Sbjct: 164 YSERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPG 223
Query: 271 KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
+ F+DIVGSAYY+APEVL+RK GPE+D+WSIGV+ YILLCG PFW ++E+GIF +L
Sbjct: 224 EVFKDIVGSAYYIAPEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSG 283
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN 390
+ DF PWP IS AKD V+K+L DP+ RLTAAQ L+HPW++E G+A ++P+D +V++
Sbjct: 284 QVDFSSDPWPVISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMS 343
Query: 391 NMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP 450
++QF + K+ ALR +A L +EE+ L++ F +D D +G+I+LEE+RQ LAK
Sbjct: 344 RLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQ-G 402
Query: 451 WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 510
+L E V ++++A D + +G +D+ EF+AAT+H+++L+ + HL S AF+ FD D
Sbjct: 403 TRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREE----HLYS--AFQHFDKD 456
Query: 511 RDGFITPEELRM---HTGLKGSID--PLLEEADIDKDGRISLSEFRRLLRTASISSRNVP 565
G+IT EEL G+ D ++ E D D DGRI+ EF ++R N
Sbjct: 457 NSGYITTEELEQALREFGMNDGRDIKEIISEVDGDNDGRINYEEFVAMMRKG-----NPD 511
Query: 566 PSPSGHR 572
P+P R
Sbjct: 512 PNPKKRR 518
|
|
| TAIR|locus:2128409 CDPK6 "calcium-dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 1.3e-111, Sum P(2) = 1.3e-111
Identities = 170/350 (48%), Positives = 245/350 (70%)
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
Y+E+ AA + RQM+ V CH G++HRD+KPENFLF S E+S LKATDFGLS F KPG
Sbjct: 174 YSERAAADLCRQMVMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPG 233
Query: 271 KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
KF+D+VGSAYYVAPEVLKR GPE+D+WS GVI YILL G PFW + E GIF +L+
Sbjct: 234 DKFKDLVGSAYYVAPEVLKRNYGPEADIWSAGVILYILLSGVPPFWGENETGIFDAILQG 293
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN 390
+ DF PWP++S+ AKD V+K+L DP+ RLTAA+ L+HPW+RE G+AS+ P+D +VL+
Sbjct: 294 QLDFSADPWPALSDGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDKPLDNAVLS 353
Query: 391 NMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP 450
M+QF ++LK+ AL+ +A L +EE+ L++ F ++D D NG ++LEE+R L K L
Sbjct: 354 RMKQFRAMNKLKKMALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPK-LG 412
Query: 451 WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 510
K+ E+ + ++++A D + DG +D+ EF++AT+H++++E D HL + AF+ FD D
Sbjct: 413 SKISEAEIRQLMEAADMDGDGSIDYLEFISATMHMNRIERED----HLYT--AFQFFDND 466
Query: 511 RDGFITPEELRM-----HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
G+IT EEL + + G SI ++ E D D+DG+I+ EF +++
Sbjct: 467 NSGYITMEELELAMKKYNMGDDKSIKEIIAEVDTDRDGKINYEEFVAMMK 516
|
|
| TAIR|locus:2175503 CPK1 "calcium dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 881 (315.2 bits), Expect = 7.1e-111, Sum P(2) = 7.1e-111
Identities = 178/363 (49%), Positives = 244/363 (67%)
Query: 202 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261
F I + YTE+ AA + R ++ V CH G++HRD+KPENFLF S EDS LK DF
Sbjct: 237 FDRIIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDF 296
Query: 262 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED 321
GLS F KP F D+VGS YYVAPEVL+++ GPE+DVWS GVI YILL G PFW +TE
Sbjct: 297 GLSMFFKPDDVFTDVVGSPYYVAPEVLRKRYGPEADVWSAGVIVYILLSGVPPFWAETEQ 356
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
GIF++VL DF PWPSIS SAKD V+K+LV+DP+ RLTA Q L HPWV+ G A +
Sbjct: 357 GIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAPD 416
Query: 382 IPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEM 441
P+D +VL+ M+QF ++ K+ ALR +A +L +EE+A L++ F+ ID DK+G I+ EE+
Sbjct: 417 KPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEEL 476
Query: 442 RQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 501
+ L K + LKES +L+++QA D + G +D+ EF+AATLH++++E D HL
Sbjct: 477 KAGL-KRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF-- 529
Query: 502 AAFEKFDIDRDGFITPEELRM---HTGLKG-SIDPLLEEADIDKDGRISLSEFRRLLRTA 557
AAF FD D G+ITP+EL+ G++ I+ L+ + D D DGRI +EF +++
Sbjct: 530 AAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKG 589
Query: 558 SIS 560
SI+
Sbjct: 590 SIT 592
|
|
| TAIR|locus:2015846 CPK33 "calcium-dependent protein kinase 33" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 851 (304.6 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 168/362 (46%), Positives = 242/362 (66%)
Query: 202 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261
F I Y+E+ AA V RQ++ V CH G++HRD+KPENFL S E + +KATDF
Sbjct: 160 FDRILAKGHYSERAAASVCRQIVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDF 219
Query: 262 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED 321
GLS FI+ G+ ++DIVGSAYYVAPEVLKR+ G E D+WS G+I YILL G PFW +TE
Sbjct: 220 GLSVFIEEGRVYKDIVGSAYYVAPEVLKRRYGKEIDIWSAGIILYILLSGVPPFWAETEK 279
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
GIF +L + DF +PWPSISNSAKD V+++L +DP+ R++AA+ L HPW+REGG+AS+
Sbjct: 280 GIFDAILEGEIDFESQPWPSISNSAKDLVRRMLTQDPKRRISAAEVLKHPWLREGGEASD 339
Query: 382 IPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEM 441
PID +VL+ M+QF ++LK+ AL+ +A +D EE+ L+ F ID D +G+I+ EE+
Sbjct: 340 KPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEEL 399
Query: 442 RQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 501
++ LAK L +L E+ V +++ A D + +G +D+ EF+ AT+H H+LE +++
Sbjct: 400 KEGLAK-LGSRLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENV------Y 452
Query: 502 AAFEKFDIDRDGFITPEELRMHT-----GLKGSIDPLLEEADIDKDGRISLSEFRRLLRT 556
AF+ FD D G+IT +EL G +I +L + D D DGRI+ EF ++R+
Sbjct: 453 KAFQHFDKDGSGYITTDELEAALKEYGMGDDATIKEILSDVDADNDGRINYDEFCAMMRS 512
Query: 557 AS 558
+
Sbjct: 513 GN 514
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| TAIR|locus:2012232 AT1G49580 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 241/531 (45%), Positives = 324/531 (61%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLK--TKQHQKTNSRRQTGVIPCGKRTDFGYDKD 93
R H + H + + K L T+ + R + + KR FG+ K+
Sbjct: 88 RRAFHPPSPAKHIRAALRRRKGKKEAALSGVTQLTTEVPQREEEEEVGLDKR--FGFSKE 145
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
F R +G+ +G G FGYT A K G VAVK I K+KM IA+EDV+REVKIL
Sbjct: 146 FHSRVELGEEIGRGHFGYTCSAKFKKGELKGQVVAVKIIPKSKMTTAIAIEDVRREVKIL 205
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
QAL+GH+N+V+FY+AFED+ VYIAMELCEGGELLDRILA+ +
Sbjct: 206 QALSGHKNLVQFYDAFEDNANVYIAMELCEGGELLDRILAR----------------GGK 249
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
Y+E DA V+ Q+L V A CH G+VHRD+KPENFL+ S +E+S LKA DFGLSDF++P
Sbjct: 250 YSENDAKPVIIQILNVVAFCHFQGVVHRDLKPENFLYTSKEENSQLKAIDFGLSDFVRPD 309
Query: 271 KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
++ DIVGSAYYVAPEVL R E+DVWSIGVI YILLCG RPFW +TE GIF+ VL+
Sbjct: 310 ERLNDIVGSAYYVAPEVLHRSYTTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN 390
P F PWP +S+ AKDFVK+LL KDPR R++A+QAL HPW+R IP DI +
Sbjct: 370 DPSFDEPPWPFLSSDAKDFVKRLLFKDPRRRMSASQALMHPWIRAYNTDMNIPFDILIFR 429
Query: 391 NMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP 450
M+ +++ S L++ ALRAL+ TL +E+ L+ QF + +K+G I+++ +R ALA +
Sbjct: 430 QMKAYLRSSSLRKAALRALSKTLIKDEILYLKTQFSLLAPNKDGLITMDTIRMALASNAT 489
Query: 451 WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 510
+KESR+ E L ++ +DF EF AA ++VHQ E D W + A+E FD +
Sbjct: 490 EAMKESRIPEFLALLNGLQYRGMDFEEFCAAAINVHQHESLDC--WEQSIRHAYELFDKN 547
Query: 511 RDGFITPEELRMHTGLKGSID--PLLEEADIDKDGRISLSEFRRLLRTASI 559
+ I EEL G+ SI +L + DG++S F +LL S+
Sbjct: 548 GNRAIVIEELASELGVGPSIPVHSVLHDWIRHTDGKLSFFGFVKLLHGVSV 598
|
|
| TAIR|locus:2092399 CPK9 "calmodulin-domain protein kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 844 (302.2 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 167/353 (47%), Positives = 237/353 (67%)
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
YTE+ AA V RQ++ V CH G++HRD+KPENFL S E + +KATDFGLS FI+ G
Sbjct: 187 YTERAAASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEG 246
Query: 271 KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
K ++DIVGSAYYVAPEVL+R+ G E D+WS G+I YILL G PFW +TE GIF +L
Sbjct: 247 KVYRDIVGSAYYVAPEVLRRRYGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILEG 306
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN 390
DF +PWPSIS+SAKD V+++L DP+ R++AA L HPW+REGG+AS+ PID +VL+
Sbjct: 307 HIDFESQPWPSISSSAKDLVRRMLTADPKRRISAADVLQHPWLREGGEASDKPIDSAVLS 366
Query: 391 NMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP 450
M+QF ++LK+ AL+ +A +D EE+ L+ F ID D +G+I+ EE+++ LAK L
Sbjct: 367 RMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAK-LG 425
Query: 451 WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 510
KL E+ V +++ A D + +G +D+ EF+ AT+H H+LE +++ AF+ FD D
Sbjct: 426 SKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNEN------LYKAFQHFDKD 479
Query: 511 RDGFITPEELRMHT-----GLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 558
G+IT +EL G +I +L + D D DGRI+ EF ++R+ +
Sbjct: 480 SSGYITIDELESALKEYGMGDDATIKEVLSDVDSDNDGRINYEEFCAMMRSGN 532
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FKW4 | CDPKS_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7373 | 0.9064 | 1.0 | no | no |
| Q1PE17 | CDPKI_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7123 | 0.9254 | 1.0 | no | no |
| Q7XJR9 | CDPKG_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7559 | 0.9670 | 0.9772 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.979 |
| 3rd Layer | 2.7.11 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00036780001 | SubName- Full=Chromosome chr4 scaffold_83, whole genome shotgun sequence; (558 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 577 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 3e-93 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-79 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 9e-58 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-55 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 6e-55 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 2e-53 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 9e-52 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-51 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 3e-51 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-50 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 3e-49 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 8e-44 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 2e-43 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 1e-41 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 3e-41 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 4e-41 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 5e-41 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 9e-41 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 1e-39 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 9e-39 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 9e-39 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 2e-38 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 6e-38 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 8e-38 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 2e-37 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 2e-36 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 5e-36 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 1e-35 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-35 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 4e-35 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 6e-35 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 2e-34 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 6e-34 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 2e-33 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 3e-33 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 3e-33 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 7e-33 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 3e-32 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 2e-31 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 4e-31 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 2e-30 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 2e-30 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 4e-30 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-30 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 5e-30 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 7e-30 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 5e-29 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 1e-28 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-28 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 1e-28 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 2e-28 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 2e-28 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 7e-28 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 9e-28 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 2e-27 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 2e-27 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 2e-27 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 3e-27 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 4e-27 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 5e-27 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 5e-27 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 6e-27 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 7e-27 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 1e-26 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 1e-26 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-26 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 2e-26 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 2e-26 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 5e-26 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 5e-26 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 6e-26 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 7e-26 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 7e-26 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 8e-26 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 1e-25 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 1e-25 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 2e-25 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 2e-25 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 4e-25 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 6e-25 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 6e-25 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 7e-25 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 1e-24 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 1e-24 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 1e-24 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 1e-24 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 2e-24 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 2e-24 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 2e-24 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 3e-24 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 3e-24 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 3e-24 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 4e-24 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 6e-24 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 6e-24 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 1e-23 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-23 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 2e-23 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 2e-23 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 2e-23 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 3e-23 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 4e-23 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 5e-23 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 6e-23 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 7e-23 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 8e-23 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 1e-22 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 2e-22 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 2e-22 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 2e-22 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 2e-22 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 3e-22 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 3e-22 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 4e-22 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 7e-22 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 1e-21 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 1e-21 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 2e-21 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 2e-21 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 2e-21 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 2e-21 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 4e-21 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 4e-21 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 5e-21 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 5e-21 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 6e-21 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 9e-21 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 2e-20 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 2e-20 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 3e-20 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 3e-20 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 3e-20 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 3e-20 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 4e-20 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 4e-20 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 4e-20 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 4e-20 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 5e-20 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 7e-20 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 8e-20 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 8e-20 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 9e-20 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 1e-19 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 2e-19 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 2e-19 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 2e-19 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 2e-19 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 3e-19 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 4e-19 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 5e-19 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 5e-19 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 5e-19 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 9e-19 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 1e-18 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 1e-18 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 1e-18 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 3e-18 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 3e-18 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 4e-18 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 6e-18 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 6e-18 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 7e-18 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 8e-18 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 8e-18 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 1e-17 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 2e-17 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 3e-17 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 3e-17 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 4e-17 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 4e-17 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 5e-17 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 5e-17 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 7e-17 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 8e-17 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 1e-16 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 1e-16 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 4e-16 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 5e-16 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 6e-16 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 7e-16 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 8e-16 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 9e-16 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 9e-16 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 2e-15 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 2e-15 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 2e-15 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 2e-15 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 4e-15 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 1e-14 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 1e-14 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 2e-14 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 2e-14 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 3e-14 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 3e-14 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 4e-14 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 5e-14 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 7e-14 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 1e-13 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 3e-13 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 4e-13 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 8e-13 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 1e-12 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 1e-12 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 2e-12 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 2e-12 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 4e-12 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 4e-12 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 5e-12 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 5e-12 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 5e-12 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 5e-12 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 8e-12 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 1e-11 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 1e-11 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-11 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 3e-11 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 4e-11 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 6e-11 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 6e-11 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 6e-11 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 7e-11 | |
| PTZ00183 | 158 | PTZ00183, PTZ00183, centrin; Provisional | 7e-11 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-10 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 1e-10 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 2e-10 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-10 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 2e-10 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 4e-10 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 4e-10 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 4e-10 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 6e-10 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 6e-10 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 6e-10 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 8e-10 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 8e-10 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 8e-10 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 9e-10 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-09 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 1e-09 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 1e-09 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 2e-09 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 2e-09 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 2e-09 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 2e-09 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 3e-09 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 3e-09 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 3e-09 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 3e-09 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 4e-09 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 4e-09 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 4e-09 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 6e-09 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 6e-09 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-08 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 1e-08 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 2e-08 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 2e-08 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 2e-08 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 3e-08 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 4e-08 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 9e-08 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 9e-08 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 1e-07 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-07 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 2e-07 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 3e-07 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 4e-07 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 6e-07 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 6e-07 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 8e-07 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 2e-06 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 2e-06 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 3e-06 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 5e-06 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 7e-06 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 1e-05 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 1e-05 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 1e-05 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 3e-05 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 5e-05 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 7e-05 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 9e-05 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 1e-04 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 1e-04 | |
| pfam10591 | 112 | pfam10591, SPARC_Ca_bdg, Secreted protein acidic a | 1e-04 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 2e-04 | |
| cd00252 | 116 | cd00252, SPARC_EC, SPARC_EC; extracellular Ca2+ bi | 2e-04 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 3e-04 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 3e-04 | |
| pfam13202 | 25 | pfam13202, EF_hand_3, EF hand | 4e-04 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 4e-04 | |
| COG4248 | 637 | COG4248, COG4248, Uncharacterized protein with pro | 6e-04 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 6e-04 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 8e-04 | |
| pfam13202 | 25 | pfam13202, EF_hand_3, EF hand | 0.001 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 0.001 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 0.001 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 0.001 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 0.002 | |
| PLN03224 | 507 | PLN03224, PLN03224, probable serine/threonine prot | 0.002 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 0.002 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 0.002 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 0.003 | |
| COG0661 | 517 | COG0661, AarF, Predicted unusual protein kinase [G | 0.003 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 0.004 | |
| PTZ00284 | 467 | PTZ00284, PTZ00284, protein kinase; Provisional | 0.004 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 0.004 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 285 bits (733), Expect = 3e-93
Identities = 118/278 (42%), Positives = 159/278 (57%), Gaps = 26/278 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I + LG G FG Y+A DK G VA+K I+K K+ E + RE+KIL+ L H
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIK--KDRERILREIKILKKL-KHP 57
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+V+ Y+ FED++ +Y+ ME CEGG+L D + +K R +E +A
Sbjct: 58 NIVRLYDVFEDEDKLYLVMEYCEGGDLFDLL-----------------KKRGRLSEDEAR 100
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+RQ+L H G+VHRD+KPEN L ED +K DFGL+ + PG+K V
Sbjct: 101 FYLRQILSALEYLHSKGIVHRDLKPENILLD---EDGHVKLADFGLARQLDPGEKLTTFV 157
Query: 278 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW-DKTEDGIFKEVLRNKPDFR 335
G+ Y+APEVL K G D+WS+GVI Y LL G+ PF D +FK++ + KP F
Sbjct: 158 GTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP 217
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
W IS AKD ++KLLVKDP RLTA +AL HP+
Sbjct: 218 PPEWD-ISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 249 bits (639), Expect = 3e-79
Identities = 102/282 (36%), Positives = 146/282 (51%), Gaps = 28/282 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + + LG G FG Y A K G VAVK ++K + +RE++IL+ L H
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRS-EKSKKDQTARREIRILRRL-SHP 58
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+V+ +AFED +++Y+ ME CEGG+L D + + +E +A
Sbjct: 59 NIVRLIDAFEDKDHLYLVMEYCEGGDLFDYL-----------------SRGGPLSEDEAK 101
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 276
+ Q+LR H +G++HRD+KPEN L E+ +K DFGL+ +K
Sbjct: 102 KIALQILRGLEYLHSNGIIHRDLKPENILLD---ENGVVKIADFGLAKKLLKSSSSLTTF 158
Query: 277 VGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNK 331
VG+ +Y+APEVL GP+ DVWS+GVI Y LL G+ PF + + + +L
Sbjct: 159 VGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPP 218
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+F W S S AKD +KK L KDP R TA + L HPW
Sbjct: 219 LEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 9e-58
Identities = 92/307 (29%), Positives = 141/307 (45%), Gaps = 54/307 (17%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
DF GK++G G F +A +K A+K ++K ++I V+ VK E ++L
Sbjct: 1 DDFK----FGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLT 56
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
L GH ++K Y F+D+ +Y +E GELL IRK
Sbjct: 57 RLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQ-----------------YIRKYGSL 99
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
EK ++L H G++HRD+KPEN L +D +K TDFG + + P
Sbjct: 100 DEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNS 156
Query: 272 KFQDI---------------------VGSAYYVAPEVLKRK-SGPESDVWSIGVITYILL 309
+ VG+A YV+PE+L K +G SD+W++G I Y +L
Sbjct: 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQML 216
Query: 310 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA----A 365
G+ PF E F+++L+ + F P+ AKD ++KLLV DP+ RL
Sbjct: 217 TGKPPFRGSNEYLTFQKILKLEYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYD 272
Query: 366 QALSHPW 372
+ +HP+
Sbjct: 273 ELKAHPF 279
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 185 bits (473), Expect = 2e-55
Identities = 90/271 (33%), Positives = 132/271 (48%), Gaps = 59/271 (21%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG Y+A DK G +VA+K I+K +E++ RE++IL+ L H N+VK Y
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDS--SSLLEELLREIEILKKLN-HPNIVKLY 57
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
FED+N++Y+ ME CEGG L D + + + +E + ++ Q+
Sbjct: 58 GVFEDENHLYLVMEYCEGGSLKDLL----------------KENEGKLSEDEILRILLQI 101
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYY 282
L H +G++HRD+KPEN L S ++ +K DFGLS + K + IVG+ Y
Sbjct: 102 LEGLEYLHSNGIIHRDLKPENILLDS--DNGKVKLADFGLSKLLTSDKSLLKTIVGTPAY 159
Query: 283 VAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
+APEVL K +SD+WS+GVI Y L
Sbjct: 160 MAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------- 187
Query: 341 SISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
KD ++K+L KDP R +A + L H
Sbjct: 188 ---PELKDLIRKMLQKDPEKRPSAKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 186 bits (474), Expect = 6e-55
Identities = 87/275 (31%), Positives = 137/275 (49%), Gaps = 32/275 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG + K G A+K ++K K+I VE E IL + H +VK +
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLH 59
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
AF+ + +Y+ +E GGEL + K+ R++E+ A ++
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSHL-----------------SKEGRFSEERARFYAAEI 102
Query: 224 LRVAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 281
+ +A E H G+++RD+KPEN L D +K TDFGL+ + G + G+
Sbjct: 103 V-LALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGLAKELSSEGSRTNTFCGTPE 158
Query: 282 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APEVL K G D WS+GV+ Y +L G+ PF+ + I++++L++ F P
Sbjct: 159 YLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRF---P-E 214
Query: 341 SISNSAKDFVKKLLVKDPRARLTAAQA---LSHPW 372
+S A+D + LL KDP RL + A +HP+
Sbjct: 215 FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 182 bits (463), Expect = 2e-53
Identities = 95/279 (34%), Positives = 140/279 (50%), Gaps = 31/279 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I + +G G FG Y A K G VA+K I+ E + E++IL+ H
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKE---KKEKIINEIQILKKCK-HP 57
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK+Y ++ + ++I ME C GG L D L K + TL TE A
Sbjct: 58 NIVKYYGSYLKKDELWIVMEFCSGGSLKD--LLKSTNQTL--------------TESQIA 101
Query: 218 VVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
V +++L+ +LH G++HRD+K N L S D +K DFGLS + K
Sbjct: 102 YVCKELLK--GLEYLHSNGIIHRDIKAANILLTS---DGEVKLIDFGLSAQLSDTKARNT 156
Query: 276 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTEDGIFKEVLRNKPD 333
+VG+ Y++APEV+ K ++D+WS+G IT I L G+ P+ + ++ N P
Sbjct: 157 MVGTPYWMAPEVINGKPYDYKADIWSLG-ITAIELAEGKPPYSELPPMKALFKIATNGPP 215
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
R P S+ KDF+KK L K+P R TA Q L HP+
Sbjct: 216 GLRNPEKW-SDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 177 bits (452), Expect = 9e-52
Identities = 86/288 (29%), Positives = 140/288 (48%), Gaps = 45/288 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y I K +G G FG Y+ K++G +K+I+ + M ED EVKIL+ L H
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLN-H 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY-TEKD 215
N++K+Y +FE+ + I ME +GG+L +I + +K+ + E+
Sbjct: 59 PNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQ--------------KKEGKPFPEEQ 104
Query: 216 AAVVVRQMLRVAAECHLHG--LVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKK 272
Q+ A +LH ++HRD+KP+N FL + +K DFG+S K
Sbjct: 105 ILDWFVQL--CLALKYLHSRKILHRDIKPQNIFLTS----NGLVKLGDFGIS------KV 152
Query: 273 FQD-------IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324
+VG+ YY++PE+ + K +SD+WS+G + Y L + PF + +
Sbjct: 153 LSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELA 212
Query: 325 KEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHP 371
++L+ + P PS S+ ++ V LL KDP R + AQ L P
Sbjct: 213 LKILKGQY----PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSP 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 176 bits (450), Expect = 2e-51
Identities = 89/286 (31%), Positives = 147/286 (51%), Gaps = 35/286 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+T G+LLG G FG Y+A DK G+ +AVK +E + +E ++RE++IL +L H
Sbjct: 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQ-H 58
Query: 157 ENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
N+V++Y + E+ N + I +E GG +L+S ++K + E
Sbjct: 59 PNIVRYYGSERDEEKNTLNIFLEYVSGG-------------SLSS----LLKKFGKLPEP 101
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGK 271
RQ+L A H +G+VHRD+K N L S D +K DFG + I+ G+
Sbjct: 102 VIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS---DGVVKLADFGCAKRLGDIETGE 158
Query: 272 KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG--IFKEVL 328
+ G+ Y++APEV++ + G +D+WS+G + G+ P+ + ++K
Sbjct: 159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS 218
Query: 329 RNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+P P +S AKDF++K L +DP+ R TA + L HP++
Sbjct: 219 SGEPP----EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 175 bits (447), Expect = 3e-51
Identities = 96/283 (33%), Positives = 139/283 (49%), Gaps = 35/283 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y +G L+G G FG Y + GD VA+K+I K I A++ + +E+ +L+ L H
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEK-IKEEALKSIMQEIDLLKNLK-H 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+VK+ + E + +YI +E E G L I+K + E
Sbjct: 59 PNIVKYIGSIETSDSLYIILEYAENGSLRQI-----------------IKKFGPFPESLV 101
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQD 275
AV V Q+L+ A H G++HRD+K N L +D +K DFG++ K
Sbjct: 102 AVYVYQVLQGLAYLHEQGVIHRDIKAANILT---TKDGVVKLADFGVATKLNDVSKDDAS 158
Query: 276 IVGSAYYVAPEVLKRKSGP--ESDVWSIGVITYI-LLCGRRPFWDKTEDGI-FKEVLRNK 331
+VG+ Y++APEV+ SG SD+WS+G T I LL G P++D F+ V +
Sbjct: 159 VVGTPYWMAPEVI-EMSGASTASDIWSLG-CTVIELLTGNPPYYDLNPMAALFRIVQDDH 216
Query: 332 PDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P P P IS KDF+ + KDP R TA Q L HPW+
Sbjct: 217 P-----PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 177 bits (449), Expect = 3e-50
Identities = 100/380 (26%), Positives = 156/380 (41%), Gaps = 40/380 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I + LG G FG Y+A D+ VA+K + K VE RE++IL +L
Sbjct: 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK Y+ F+D+ +Y+ ME +GG L D + L +E +A
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPL--------------SESEAL 104
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK------ 271
++ Q+L H G++HRD+KPEN L + +K DFGL+ +
Sbjct: 105 FILAQILSALEYLHSKGIIHRDIKPENILLDR--DGRVVKLIDFGLAKLLPDPGSTSSIP 162
Query: 272 -KFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
VG+ Y+APEVL + SD+WS+G+ Y LL G PF + +
Sbjct: 163 ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQ 222
Query: 327 VLRN---------KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377
L+ IS +A D +KKLL KDP+ RL+++ LSH +
Sbjct: 223 TLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLK 282
Query: 378 DASEIPIDISVLNN-MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSI 436
D+ ++ + + + +L S L D + ++ NG
Sbjct: 283 LKESDLSDLLKPDDSAPLRLSLPPSLEALISSLNSLAISGSDLKLDDSNFSKELAPNGVS 342
Query: 437 SLEEMRQALAKDLPWKLKES 456
S +L + S
Sbjct: 343 SSPHNSSSLLLSTASSKRSS 362
|
Length = 384 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 171 bits (435), Expect = 3e-49
Identities = 90/282 (31%), Positives = 132/282 (46%), Gaps = 42/282 (14%)
Query: 107 GQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 166
G +G ++A K+ GD A+K I+K MI V+ V E IL A VVK Y +F
Sbjct: 4 GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILS-QAQSPYVVKLYYSF 62
Query: 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
+ +Y+ ME GG+L L + + + E A + + +++
Sbjct: 63 QGKKNLYLVMEYLPGGDL--ASLLENVGS---------------LDEDVARIYIAEIVLA 105
Query: 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---------IKPGKKFQDIV 277
H +G++HRD+KP+N L S + LK TDFGLS K+ + IV
Sbjct: 106 LEYLHSNGIIHRDLKPDNILIDS---NGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIV 162
Query: 278 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ Y+APEV+ + D WS+G I Y L G PF +T + IF+ +L K
Sbjct: 163 GTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK----- 217
Query: 337 KPWPS---ISNSAKDFVKKLLVKDPRARLTAAQA---LSHPW 372
WP +S+ A D + KLLV DP RL A +HP+
Sbjct: 218 IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPF 259
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 8e-44
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 43/288 (14%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR-----EVKILQALA 154
K+LG G G Y K G A+KKI + ++ R E+K L++
Sbjct: 5 RVKVLGQGSSGVVYKVRHKPTGKIYALKKI-------HVDGDEEFRKQLLRELKTLRS-C 56
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
VVK Y AF + + I +E +GG L D ++K + E
Sbjct: 57 ESPYVVKCYGAFYKEGEISIVLEYMDGGSLAD-----------------LLKKVGKIPEP 99
Query: 215 DAAVVVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG- 270
A + RQ+L+ +LH ++HRD+KP N L S E +K DFG+S ++
Sbjct: 100 VLAYIARQILKGLD--YLHTKRHIIHRDIKPSNLLINSKGE---VKIADFGISKVLENTL 154
Query: 271 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
+ VG+ Y++PE ++ +S +D+WS+G+ G+ PF F E+++
Sbjct: 155 DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPF-LPPGQPSFFELMQ 213
Query: 330 NKPDFRRKPWPS--ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
D P+ S +DF+ L KDP+ R +AA+ L HP++++
Sbjct: 214 AICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 156 bits (396), Expect = 2e-43
Identities = 93/287 (32%), Positives = 139/287 (48%), Gaps = 39/287 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ K LG G FG + K +G A+K + K K++ VE V E +ILQ++ H
Sbjct: 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHP 61
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V Y +F+DD+ +Y+ ME GGEL F +RK R+ E A
Sbjct: 62 FLVNLYGSFQDDSNLYLVMEYVPGGEL-----------------FSHLRKSGRFPEPVAR 104
Query: 218 VVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
Q++ +A E +LH +V+RD+KPEN L S D +K TDFG + +K
Sbjct: 105 FYAAQVV-LALE-YLHSLDIVYRDLKPENLLLDS---DGYIKITDFGFAKRVKGRT--YT 157
Query: 276 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
+ G+ Y+APE++ K G D W++G++ Y +L G PF+D I++++L K F
Sbjct: 158 LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRF 217
Query: 335 RRKPWPS-ISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 375
PS S AKD ++ LL D RL +HPW
Sbjct: 218 -----PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 1e-41
Identities = 84/285 (29%), Positives = 137/285 (48%), Gaps = 33/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G G Y ATD+A G VA+KK+ K E + E+ I++ H N+V
Sbjct: 27 IGEGASGEVYKATDRATGKEVAIKKMRLRKQNK------ELIINEILIMKDCK-HPNIVD 79
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+Y+++ + +++ ME +GG L D + + R E A V R
Sbjct: 80 YYDSYLVGDELWVVMEYMDGGSLTD----------------IITQNFVRMNEPQIAYVCR 123
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSA 280
++L+ H ++HRD+K +N L D S+K DFG + + K K +VG+
Sbjct: 124 EVLQGLEYLHSQNVIHRDIKSDNILLSK---DGSVKLADFGFAAQLTKEKSKRNSVVGTP 180
Query: 281 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKPDFRRKP 338
Y++APEV+KRK GP+ D+WS+G++ + G P+ + +F + P +
Sbjct: 181 YWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNP- 239
Query: 339 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
S KDF+ K LVKDP R +A + L HP++++ E
Sbjct: 240 -EKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEEFA 283
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 3e-41
Identities = 91/308 (29%), Positives = 134/308 (43%), Gaps = 56/308 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I +G G G + A D+ G+ VA+KK+ ++ I RE+K LQA H
Sbjct: 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIP-NQALREIKALQAC-QH 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR-YTEKD 215
VVK + F + + ME +L + + R + R E
Sbjct: 59 PYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVL-----------------RDEERPLPEAQ 100
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ- 274
+R +L+ A H +G++HRD+KP N L + D LK DFGL+ +
Sbjct: 101 VKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA---DGVLKIADFGLARLFSEEEPRLY 157
Query: 275 -DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKE 326
V + +Y APE+L RK P D+W++G I LL G P + D +F+
Sbjct: 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGS-PLFPGENDIEQLAIVFRT 216
Query: 327 V----------LRNKPDF--------RRKPW----PSISNSAKDFVKKLLVKDPRARLTA 364
+ L + PD+ + P P S A D +K LLV DP RL+A
Sbjct: 217 LGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSA 276
Query: 365 AQALSHPW 372
A+AL HP+
Sbjct: 277 AEALRHPY 284
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 4e-41
Identities = 98/311 (31%), Positives = 134/311 (43%), Gaps = 62/311 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM------ILPIAVEDVKREVKIL 150
RY GK LG G + Y A DK G VA+KKI+ + I A+ RE+K+L
Sbjct: 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTAL----REIKLL 56
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
Q L H N++ + F + + + E E D L K+I K
Sbjct: 57 QELK-HPNIIGLLDVFGHKSNINLVFEFMET----D--LEKVIK-----------DKSIV 98
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
T D + LR H + ++HRD+KP N L S D LK DFGL+ F P
Sbjct: 99 LTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIAS---DGVLKLADFGLARSFGSP 155
Query: 270 GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-----G 322
+K V + +Y APE+L R G D+WS+G I + L R PF D
Sbjct: 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCI-FAELLLRVPFLPGDSDIDQLGK 214
Query: 323 IFKEVL-----RNKPDFRRKP----------------WPSISNSAKDFVKKLLVKDPRAR 361
IF E L N P P +P+ S+ A D +++LL +P R
Sbjct: 215 IF-EALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKR 273
Query: 362 LTAAQALSHPW 372
+TA QAL HP+
Sbjct: 274 ITARQALEHPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 148 bits (377), Expect = 5e-41
Identities = 84/280 (30%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG + K+ A+K ++K ++ E + E +IL+ H +VK Y
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLY 59
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
F+D Y+Y+ ME C GGEL +R + E A + +
Sbjct: 60 RTFKDKKYIYMLMEYCLGGELWT-----------------ILRDRGLFDEYTARFYIACV 102
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSS--LKATDFGLSDFIKPGKKFQDIVGSAY 281
+ H G+++RD+KPEN L DS+ +K DFG + +K G+K G+
Sbjct: 103 VLAFEYLHNRGIIYRDLKPENLLL-----DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157
Query: 282 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRRKP 338
YVAPE++ K D WS+G++ Y LL GR PF + ED I+ ++L+
Sbjct: 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE--- 214
Query: 339 WPS-ISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPW 372
+P+ I +AKD +K+LL ++P RL + H W
Sbjct: 215 FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKW 254
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 9e-41
Identities = 94/299 (31%), Positives = 144/299 (48%), Gaps = 57/299 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALA 154
R+ G +G G FG Y A + G+ +AVK +I+ N P ++++ E+K+L+ L
Sbjct: 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND---PKTIKEIADEMKVLELLK 57
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLD-----RILAKMISTTLTSAWFLAIRKDS 209
H N+VK+Y VYI ME C GG L + RIL + + IR
Sbjct: 58 -HPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHV-----------IR--- 102
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
YT Q+L A H HG+VHRD+KP N + +K DFG + +K
Sbjct: 103 VYT--------LQLLEGLAYLHSHGIVHRDIKPANIFLDH---NGVIKLGDFGCAVKLKN 151
Query: 270 -----GKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTE 320
G++ Q + G+ Y+APEV+ G +D+WS+G + + G+RP W + +
Sbjct: 152 NTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRP-WSELD 210
Query: 321 DG---IFKEVLRNKPDFRRKPWP---SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ +F +KP P P +S KDF+ + L DP+ R TA++ L HP+V
Sbjct: 211 NEFQIMFHVGAGHKP-----PIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 1e-39
Identities = 91/279 (32%), Positives = 134/279 (48%), Gaps = 31/279 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K + G FG Y+A ++ GD A+K ++K+ MI V +VK E I+ V K
Sbjct: 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAK 61
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y +F+ +Y+Y+ ME GG+ L K + L W ++ Y A VV+
Sbjct: 62 LYYSFQSKDYLYLVMEYLNGGDC--ASLIKTLGG-LPEDW---AKQ---YI---AEVVL- 108
Query: 222 QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 279
E LH G++HRD+KPEN L + LK TDFGLS KKF VG+
Sbjct: 109 -----GVE-DLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLSRNGLENKKF---VGT 156
Query: 280 AYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338
Y+APE + + SD WS+G + + L G PF +T D +F +L + ++ +
Sbjct: 157 PDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEV 216
Query: 339 WPSISNSAKDFVKKLLVKDPRARLTA---AQALSHPWVR 374
S A D + +LL DP RL A + SHP+ +
Sbjct: 217 KEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFK 255
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 9e-39
Identities = 91/308 (29%), Positives = 139/308 (45%), Gaps = 54/308 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + K++G G FG ++ DK G A+K + K+ MI + V+ E IL A A
Sbjct: 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDIL-ADADS 60
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+VK Y +F+D+ ++Y+ ME GG+L++ L IRKD + E+ A
Sbjct: 61 PWIVKLYYSFQDEEHLYLVMEYMPGGDLMN----------------LLIRKD-VFPEETA 103
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQD 275
+ +++ H G +HRD+KP+N L D +K DFGL K +
Sbjct: 104 RFYIAELVLALDSVHKLGFIHRDIKPDNILID---ADGHIKLADFGLCKKMNKAKDREYY 160
Query: 276 -----------------------------IVGSAYYVAPEVLKRKS-GPESDVWSIGVIT 305
VG+ Y+APEVL+ G E D WS+GVI
Sbjct: 161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVIL 220
Query: 306 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
Y +L G PF+ T + +++ K R P P +S A D + +LL DP RL +
Sbjct: 221 YEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSF 279
Query: 366 -QALSHPW 372
+ SHP+
Sbjct: 280 EEIKSHPF 287
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 9e-39
Identities = 98/310 (31%), Positives = 145/310 (46%), Gaps = 63/310 (20%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK-------MILPIAVEDVKREVKIL 150
Y + K LG G FG Y+A +K G+ VA+KK+ K K M L REVK L
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKM-KKKFYSWEECMNL--------REVKSL 51
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+ L H N+VK F +++ +Y E EG L +++ RK
Sbjct: 52 RKLNEHPNIVKLKEVFRENDELYFVFEYMEGN------LYQLMKD----------RKGKP 95
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
++E ++ Q+L+ A H HG HRD+KPEN L + +K DFGL+ I+
Sbjct: 96 FSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE---VVKIADFGLAREIRSR 152
Query: 271 KKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTE-DGIFK-- 325
+ D V + +Y APE+L R + S D+W++G I L R F +E D ++K
Sbjct: 153 PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKIC 212
Query: 326 EVL-----RNKPD---------FR---------RKPWPSISNSAKDFVKKLLVKDPRARL 362
VL ++ P+ FR + P+ S A D +K +L DP+ R
Sbjct: 213 SVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRP 272
Query: 363 TAAQALSHPW 372
TA+QAL HP+
Sbjct: 273 TASQALQHPY 282
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 2e-38
Identities = 88/309 (28%), Positives = 138/309 (44%), Gaps = 62/309 (20%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPI-AVEDVKREVKILQALA 154
Y + LG G +G Y A DK G+ VA+KKI + +P A+ RE+ +L+ L
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTAL----REISLLKELK 56
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N+VK + + +Y+ E C+ +D L K + D R
Sbjct: 57 -HPNIVKLLDVIHTERKLYLVFEYCD----MD--LKKYL--------------DKRPGPL 95
Query: 215 DAAVV---VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPG 270
++ + Q+LR A CH H ++HRD+KP+N L D LK DFGL+ F P
Sbjct: 96 SPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR---DGVLKLADFGLARAFGIPL 152
Query: 271 KKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK-- 325
+ + V + +Y APE+L + D+WS+G I ++ G+ F +E D +FK
Sbjct: 153 RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIF 212
Query: 326 EVL------------------RNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLT 363
++L P F K P + D + K+L +P R++
Sbjct: 213 QILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRIS 272
Query: 364 AAQALSHPW 372
A +AL HP+
Sbjct: 273 AKEALKHPY 281
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 6e-38
Identities = 81/287 (28%), Positives = 134/287 (46%), Gaps = 37/287 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + +++G G Y A N ++VA+K+I+ K +V+++++EV+ + H
Sbjct: 3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC--QTSVDELRKEVQAMSQCN-HP 59
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
NVVK+Y +F + +++ M GG LLD + + E A
Sbjct: 60 NVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSY--------------PRGGLDEAIIA 105
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPG----KK 272
V++++L+ H +G +HRD+K N L ED S+K DFG+S + G K
Sbjct: 106 TVLKEVLKGLEYLHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADGGDRTRKV 162
Query: 273 FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYI-LLCGRRPFWDKTEDGIFKEVLR 329
+ VG+ ++APEV+++ G ++D+WS G IT I L G P+ + L+
Sbjct: 163 RKTFVGTPCWMAPEVMEQVHGYDFKADIWSFG-ITAIELATGAAPYSKYPPMKVLMLTLQ 221
Query: 330 NKP-----DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
N P K + S S + + L KDP R TA + L H
Sbjct: 222 NDPPSLETGADYKKY---SKSFRKMISLCLQKDPSKRPTAEELLKHK 265
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 8e-38
Identities = 94/310 (30%), Positives = 137/310 (44%), Gaps = 63/310 (20%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALA 154
Y +G G +G Y A DK G+ VA+KKI +++ I A+ RE+K+L+ L
Sbjct: 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTAL----REIKLLKELN 56
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY--T 212
H N++K + F +Y+ E D L K+I KD +
Sbjct: 57 -HPNIIKLLDVFRHKGDLYLVFEFM------DTDLYKLI-------------KDRQRGLP 96
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK 271
E + Q+L+ A CH HG++HRD+KPEN L + LK DFGL+ F P +
Sbjct: 97 ESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVR 153
Query: 272 KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 325
+ V + +Y APE+L D+WS+G I LL RRP + D +FK
Sbjct: 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELL-SRRPLFPGKSEIDQLFKIF 212
Query: 326 EVL-------------------RNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARL 362
L + P P P+ S A D + ++L DP R+
Sbjct: 213 RTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRI 272
Query: 363 TAAQALSHPW 372
TA QAL+HP+
Sbjct: 273 TAEQALAHPY 282
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 2e-37
Identities = 99/341 (29%), Positives = 152/341 (44%), Gaps = 91/341 (26%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK-------NKMILPIAVEDVKREVKI 149
RY + K +G G +G A DK G +VA+KKI K IL RE+K+
Sbjct: 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRIL--------REIKL 52
Query: 150 LQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAKMIST--TLTSA-- 200
L+ L HEN++ + ED N VYI EL++ L K+I + LT
Sbjct: 53 LRHLR-HENIIGLLDILRPPSPEDFNDVYIVT------ELMETDLHKVIKSPQPLTDDHI 105
Query: 201 -WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLK 257
+FL Y Q+LR +LH ++HRD+KP N L + LK
Sbjct: 106 QYFL-------Y----------QILR--GLKYLHSANVIHRDLKPSNIL---VNSNCDLK 143
Query: 258 ATDFGLSDFIKPGKKFQDI----VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCG 311
DFGL+ + P + + V + +Y APE+L + D+WS+G I LL
Sbjct: 144 ICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL-T 202
Query: 312 RRPF---------WDK--------TEDGI-------FKEVLRNKPDFRRKPW----PSIS 343
R+P + +E+ + + L++ P +KP P S
Sbjct: 203 RKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGAS 262
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
A D ++K+LV DP+ R+TA +AL+HP++ + D + P+
Sbjct: 263 PEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPV 303
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 2e-36
Identities = 90/314 (28%), Positives = 134/314 (42%), Gaps = 66/314 (21%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKK---IEKNKMILPIAVEDVKREVKILQAL 153
+Y + ++G G +G +KA G+ VA+KK E ++ + A+ REVK+L+ L
Sbjct: 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTAL----REVKVLRQL 57
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGG--ELLDRILAKM-ISTTLTSAWFLAIRKDSR 210
HEN+V AF +Y+ E E ELL+ + + W
Sbjct: 58 R-HENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIW--------- 107
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--K 268
Q+L+ A CH H ++HRD+KPEN L E LK DFG + + +
Sbjct: 108 -----------QLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRAR 153
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK 325
P D V + +Y APE+L G DVW+IG I LL G F ++ D ++
Sbjct: 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYL 213
Query: 326 -------------EVLRNKPDFRRKPWPSI--------------SNSAKDFVKKLLVKDP 358
E+ + P F +P S+ A DF+K L DP
Sbjct: 214 IQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDP 273
Query: 359 RARLTAAQALSHPW 372
+ RLT + L HP+
Sbjct: 274 KERLTCDELLQHPY 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 136 bits (343), Expect = 5e-36
Identities = 86/284 (30%), Positives = 147/284 (51%), Gaps = 34/284 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +ATDK+ G +VAVKK++ K E + EV I++ H N+V+ Y
Sbjct: 27 IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HPNIVEMY 82
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+++ + +++ ME EGG L D I +R E+ A V +
Sbjct: 83 SSYLVGDELWVVMEFLEGGALTD------------------IVTHTRMNEEQIATVCLAV 124
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG----LSDFIKPGKKFQDIVGS 279
L+ + H G++HRD+K ++ L S D +K +DFG +S + P +K +VG+
Sbjct: 125 LKALSFLHAQGVIHRDIKSDSILLTS---DGRVKLSDFGFCAQVSKEV-PRRK--SLVGT 178
Query: 280 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338
Y++APEV+ R G E D+WS+G++ ++ G P++++ K + N P +
Sbjct: 179 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNL 238
Query: 339 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
+S + F+ ++LV+DP R TAA+ L+HP++ + G S I
Sbjct: 239 -HKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPSSI 281
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 1e-35
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 30/300 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+T+ + +G G FG Y A DK VA+K I+ + I ED+++E++ L
Sbjct: 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEI--EDIQQEIQFLSQCRS- 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ K+Y +F + ++I ME C GG LD + K + E
Sbjct: 59 PYITKYYGSFLKGSKLWIIMEYCGGGSCLDLL------------------KPGKLDETYI 100
Query: 217 AVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 274
A ++R++L E H G +HRD+K N L E+ +K DFG+S + K
Sbjct: 101 AFILREVLL-GLEYLHEEGKIHRDIKAANILLS---EEGDVKLADFGVSGQLTSTMSKRN 156
Query: 275 DIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
VG+ +++APEV+K+ E +D+WS+G+ L G P D + + +N P
Sbjct: 157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPP 216
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 393
S KDFV L KDP+ R +A + L H ++++ S + + I + +
Sbjct: 217 --SLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKTSYLTLLIERIKKWK 274
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 2e-35
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 35/285 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F+ IGK G FG + + A+K + K K + +V +V E +ILQ L
Sbjct: 2 FELLRVIGK----GAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL 57
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H +V + +F+D+ +Y+ ++L GG+L + K +++E
Sbjct: 58 N-HPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-----------------VKFSE 99
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+ + +++ H G++HRD+KP+N L E + TDF ++ + P
Sbjct: 100 EQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHVHITDFNIATKVTPDTLT 156
Query: 274 QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLR 329
G+ Y+APEVL R+ D WS+GV Y L G+RP+ + D I +
Sbjct: 157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET 216
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL--TAAQALSHPW 372
+ + S A D + KLL +DP+ RL +HP+
Sbjct: 217 ADVLY----PATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPY 257
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 4e-35
Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 39/287 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALA 154
R+ G+LLG G FG Y + +GD AVK + + AV+ +++E+ +L L
Sbjct: 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ 60
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N+V++ +++ +YI +EL GG L ++L K S + E
Sbjct: 61 -HPNIVQYLGTEREEDNLYIFLELVPGGSLA-KLLKKYGS----------------FPEP 102
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 274
+ RQ+L H VHRD+K N L + + +K DFG++ + +
Sbjct: 103 VIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT---NGVVKLADFGMAKQVVEFSFAK 159
Query: 275 DIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRN 330
GS Y++APEV+ ++ G +D+WS+G T + + +P W + E +FK
Sbjct: 160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGC-TVLEMATGKPPWSQLEGVAAVFKIG--- 215
Query: 331 KPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
R K P I S+ AKDF+ K L +DP R TAA+ L HP+V
Sbjct: 216 ----RSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 133 bits (338), Expect = 6e-35
Identities = 93/314 (29%), Positives = 138/314 (43%), Gaps = 68/314 (21%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G G ++ K G A+K ++K +MI V+ V E +IL L H +
Sbjct: 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPT 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD----AA 217
Y +F+ + Y+ + M+ C GGEL L + +E+ AA
Sbjct: 66 LYASFQTETYLCLVMDYCPGGELFR---------------LLQRQPGKCLSEEVARFYAA 110
Query: 218 VVVRQMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------------ 264
V+ +A E HL G+V+RD+KPEN L E + +DF LS
Sbjct: 111 EVL-----LALEYLHLLGIVYRDLKPENILL---HESGHIMLSDFDLSKQSDVEPPPVSK 162
Query: 265 ----------------DFIK--PGKKFQDIVGSAYYVAPEVLKRKSGPESDV--WSIGVI 304
+ P + VG+ Y+APEV+ G S V W++G++
Sbjct: 163 ALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS-GDGHGSAVDWWTLGIL 221
Query: 305 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-- 362
Y +L G PF D F +L+ + F P +S+SA+D ++KLLVKDP RL
Sbjct: 222 LYEMLYGTTPFKGSNRDETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGS 279
Query: 363 --TAAQALSHPWVR 374
AA+ HP+ R
Sbjct: 280 KRGAAEIKQHPFFR 293
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 2e-34
Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 56/292 (19%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I + LG G +G Y A K G VA+K + + ++++ +E+ IL+
Sbjct: 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQ-CDSP 58
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+VK+Y ++ + ++I ME C G + D + K+ + TLT E++ A
Sbjct: 59 YIVKYYGSYFKNTDLWIVMEYCGAGSVSD--IMKITNKTLT--------------EEEIA 102
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 276
++ Q L+ H + +HRD+K N L E+ K DFG+S K +
Sbjct: 103 AILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQAKLADFGVSGQLTDTMAKRNTV 159
Query: 277 VGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 333
+G+ +++APEV++ + G + D+WS+G IT I + G+ P +
Sbjct: 160 IGTPFWMAPEVIQ-EIGYNNKADIWSLG-ITAIEMAEGKPP-------------YSDIHP 204
Query: 334 FR------RKPWPSISNSAK------DFVKKLLVKDPRARLTAAQALSHPWV 373
R KP P++S+ K DFVKK LVKDP R +A Q L HP++
Sbjct: 205 MRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 6e-34
Identities = 86/293 (29%), Positives = 142/293 (48%), Gaps = 40/293 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + +++G G +G Y A K G VA+K ++ I+ E++K E IL+ + H
Sbjct: 7 IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMD----IIEDEEEEIKEEYNILRKYSNH 62
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
N+ FY AF +D+ +++ MELC GG + D L K + +K R
Sbjct: 63 PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTD--LVKGL-----------RKKGKR 109
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
E+ A ++R+ LR A H + ++HRD+K +N L +++ +K DFG+S
Sbjct: 110 LKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL---TKNAEVKLVDFGVSAQLDST 166
Query: 270 GKKFQDIVGSAYYVAPEVLKRKSGPE------SDVWSIGVITYILLC-GRRPFWDKTEDG 322
+ +G+ Y++APEV+ P+ SDVWS+G IT I L G+ P D
Sbjct: 167 LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLG-ITAIELADGKPPLCDMHPMR 225
Query: 323 IFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
++ RN P + P W S DF+ + L+K+ R + L HP++
Sbjct: 226 ALFKIPRNPPPTLKSPENW---SKKFNDFISECLIKNYEQRPFMEELLEHPFI 275
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 2e-33
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 45/292 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D +R T+G G FG ++ D+ + A+K + ++I + V E ++L+
Sbjct: 2 DLERIKTVGT----GTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKE 57
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
++ H +++ + D ++Y+ ME GGEL F +R R++
Sbjct: 58 VS-HPFIIRLFWTEHDQRFLYMLMEYVPGGEL-----------------FSYLRNSGRFS 99
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
+++ H +V+RD+KPEN L + +K TDFG + KK
Sbjct: 100 NSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDK---EGHIKLTDFGFA------KK 150
Query: 273 FQD----IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
+D + G+ Y+APEV++ K D W++G++ Y +L G PF+D GI++++
Sbjct: 151 LRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKI 210
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 374
L K +F R + AKD +KKLLV D RL A +H W +
Sbjct: 211 LAGKLEFPR----HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 3e-33
Identities = 92/292 (31%), Positives = 151/292 (51%), Gaps = 29/292 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT K++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 28 IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 83
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
N++ + +++ ME EGG L D I +R E+ A V +
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTD------------------IVTHTRMNEEQIAAVCLAV 125
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYY 282
L+ + H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y+
Sbjct: 126 LKALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW 182
Query: 283 VAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APE++ R GPE D+WS+G++ ++ G P++++ K + N P + K
Sbjct: 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-KLKNLHK 241
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 393
+S S K F+ +LLV+DP R TAA+ L HP++ + G S I + + N MR
Sbjct: 242 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPSCI-VPLMRQNRMR 292
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 3e-33
Identities = 88/278 (31%), Positives = 134/278 (48%), Gaps = 30/278 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G ++A K G+ VA+K+++K+ + V V E IL E +VK
Sbjct: 9 VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDIL-TTTKSEWLVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
AF+DD Y+Y+AME GG+ T L + L +E A + +M
Sbjct: 68 YAFQDDEYLYLAMEYVPGGDF---------RTLLNNLGVL--------SEDHARFYMAEM 110
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 283
H G +HRD+KPENFL + +K TDFGLS I +VGS Y+
Sbjct: 111 FEAVDALHELGYIHRDLKPENFLIDA---SGHIKLTDFGLSKGIV--TYANSVVGSPDYM 165
Query: 284 APEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR----KP 338
APEVL+ + D WS+G + Y LCG PF T + ++ + K +R P
Sbjct: 166 APEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDP 225
Query: 339 WPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVRE 375
++S+ A D + KL+ DP R + + + +HP+ +E
Sbjct: 226 RFNLSDEAWDLITKLI-NDPSRRFGSLEDIKNHPFFKE 262
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 7e-33
Identities = 88/304 (28%), Positives = 132/304 (43%), Gaps = 59/304 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G +G Y A +K G+ VA+KKI E K PI RE+K+LQ L H N+V+
Sbjct: 7 IGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITA---IREIKLLQKL-RHPNIVR 62
Query: 162 FYNAF--EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
+ +Y+ E + LT L + ++TE
Sbjct: 63 LKEIVTSKGKGSIYMVFEYMD--------------HDLTG---LLDSPEVKFTESQIKCY 105
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIV 277
++Q+L H +G++HRD+K N L + D LK DFGL+ + + V
Sbjct: 106 MKQLLEGLQYLHSNGILHRDIKGSNILINN---DGVLKLADFGLARPYTKRNSADYTNRV 162
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV---- 327
+ +Y PE+L + GPE D+WS+G I L G+ F TE + IF+
Sbjct: 163 ITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPT 222
Query: 328 ------LRNKPDFR----RKPWPS---------ISNSAKDFVKKLLVKDPRARLTAAQAL 368
+ P F +KP+ I SA D + KLL DP+ R++A QAL
Sbjct: 223 DENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQAL 282
Query: 369 SHPW 372
H +
Sbjct: 283 QHEY 286
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 3e-32
Identities = 96/290 (33%), Positives = 139/290 (47%), Gaps = 39/290 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG Y A K G A K I+ +ED E+ IL + H N+V Y
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQIES---EEELEDFMVEIDIL-SECKHPNIVGLY 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
A+ +N ++I +E C+GG L D I+ ++ + TE V RQM
Sbjct: 69 EAYFYENKLWILIEFCDGGAL-DSIMLEL---------------ERGLTEPQIRYVCRQM 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-IVGSAYY 282
L H H ++HRD+K N L D +K DFG+S K + +D +G+ Y+
Sbjct: 113 LEALNFLHSHKVIHRDLKAGNILLTL---DGDVKLADFGVSAKNKSTLQKRDTFIGTPYW 169
Query: 283 VAPEVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDG--IFKEVLRNKPDF 334
+APEV+ K P ++D+WS+G IT I L P + + K +L+++P
Sbjct: 170 MAPEVVACETFKDNPYDYKADIWSLG-ITLIELAQMEPPHHELNPMRVLLK-ILKSEPPT 227
Query: 335 RRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
+P W S+S DF+K LVKDP R TAA+ L HP+V + D I
Sbjct: 228 LDQPSKW---SSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDNKAI 274
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 2e-31
Identities = 87/287 (30%), Positives = 136/287 (47%), Gaps = 41/287 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y + + +G G +G Y A D A G+ VA+K I K+ E +++E+ +L+ H
Sbjct: 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVI---KLEPGDDFEIIQQEISMLKE-CRH 59
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+V ++ ++ + ++I ME C GG L D + ++ L +E
Sbjct: 60 PNIVAYFGSYLRRDKLWIVMEYCGGGSLQD--IYQVTRGPL--------------SELQI 103
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQD 275
A V R+ L+ A H G +HRD+K N L ED +K DFG+S + K +
Sbjct: 104 AYVCRETLKGLAYLHETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTATIAKRKS 160
Query: 276 IVGSAYYVAPEVL--KRKSGPES--DVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330
+G+ Y++APEV +RK G + D+W++G IT I L + P +D L
Sbjct: 161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALG-ITAIELAELQPPMFDLHP----MRALFL 215
Query: 331 KPDFRRKPWPSISNSAK------DFVKKLLVKDPRARLTAAQALSHP 371
P P + + K DF+KK L KDP+ R TA + L HP
Sbjct: 216 ISKSNFPP-PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 4e-31
Identities = 87/281 (30%), Positives = 143/281 (50%), Gaps = 28/281 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT+K G +VAVKK++ K E + EV I++ HENVV Y
Sbjct: 30 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQ---RRELLFNEVVIMRDYH-HENVVDMY 85
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
N++ + +++ ME EGG L D I +R E+ A V +
Sbjct: 86 NSYLVGDELWVVMEFLEGGALTD------------------IVTHTRMNEEQIATVCLSV 127
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYY 282
LR + H G++HRD+K ++ L S D +K +DFG + K K + +VG+ Y+
Sbjct: 128 LRALSYLHNQGVIHRDIKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKSLVGTPYW 184
Query: 283 VAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APEV+ R G E D+WS+G++ ++ G P++++ + + N P R K
Sbjct: 185 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP-RVKDSHK 243
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
+S+ + F+ +LV++P R TA + L HP+++ G S I
Sbjct: 244 VSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSCI 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 2e-30
Identities = 87/312 (27%), Positives = 138/312 (44%), Gaps = 45/312 (14%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
KDFD + +G+ G FG V +KA GD A+K ++K+ ++ V + E IL
Sbjct: 1 KDFDVKSLVGR----GHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDIL- 55
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
+++ + + AF+D + +Y+ ME GG+LL L R + ++
Sbjct: 56 SISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLS----------------LLNRYEDQF 99
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
E A + +++ H G VHRD+KPEN L +K DFG + + K
Sbjct: 100 DEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRT---GHIKLADFGSAARLTANK 156
Query: 272 KFQDI--VGSAYYVAPEVL-------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322
VG+ Y+APEVL K G E D WS+GVI Y ++ GR PF + T
Sbjct: 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK 216
Query: 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
+ ++ + + P +S+ D ++ LL + RL HP+ S+I
Sbjct: 217 TYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFF------SKI 269
Query: 383 PIDISVLNNMRQ 394
NN+R
Sbjct: 270 D-----WNNIRN 276
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 2e-30
Identities = 97/333 (29%), Positives = 151/333 (45%), Gaps = 45/333 (13%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
+G+ LG G FG +A K G+ A+K ++K +++ V+ V +E IL L+ H +
Sbjct: 22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFI 80
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
V +F+D+N VY +E GGEL F +RK R+ D A
Sbjct: 81 VNMMCSFQDENRVYFLLEFVVGGEL-----------------FTHLRKAGRFP-NDVAKF 122
Query: 220 VRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
L +A E +LH +++RD+KPEN L + +K TDFG + + P + F +
Sbjct: 123 YHAELVLAFE-YLHSKDIIYRDLKPENLLLDN---KGHVKVTDFGFAKKV-PDRTFT-LC 176
Query: 278 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ Y+APEV++ K G D W++GV+ Y + G PF+D T I++++L + F
Sbjct: 177 GTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN 236
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG--------GDASEIP 383
W A+D VK LL D RL A +HP+ + IP
Sbjct: 237 --W--FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYARYYPAPIP 292
Query: 384 IDISVLNNMRQFVKYSRLKQFALRALASTLDDE 416
+ + + F KY L L + E
Sbjct: 293 VRVKSPGDTSNFEKYPDSPVDRLPPLTAAQQAE 325
|
Length = 329 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 118 bits (299), Expect = 4e-30
Identities = 90/291 (30%), Positives = 130/291 (44%), Gaps = 60/291 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDVKREVKILQALAGHE 157
LG G G + G +AVK I K IL RE+ IL
Sbjct: 9 LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQIL--------RELDILHK-CNSP 59
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V FY AF ++ + I ME +GG LD+IL ++ R K A
Sbjct: 60 YIVGFYGAFYNNGDISICMEYMDGGS-LDKILKEVQGRI-----------PERILGKIAV 107
Query: 218 VVVRQM--LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---- 271
V++ + L H ++HRD+KP N L S + +K DFG+S G+
Sbjct: 108 AVLKGLTYLH-----EKHKIIHRDVKPSNILVNSRGQ---IKLCDFGVS-----GQLVNS 154
Query: 272 KFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPF--WDKTEDGIFK 325
+ VG++ Y+APE R G +SD+WS+G+ L GR P+ + DGIF
Sbjct: 155 LAKTFVGTSSYMAPE---RIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF- 210
Query: 326 EVLR---NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
E+L+ N+P R P S +DFV L+KDPR R + + L HP++
Sbjct: 211 ELLQYIVNEPP-PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 118 bits (299), Expect = 4e-30
Identities = 82/290 (28%), Positives = 139/290 (47%), Gaps = 44/290 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR-----EVKILQA 152
Y + + +G G FG K++G + K+I+ M + ++ EV IL+
Sbjct: 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM------TEKEKQQLVSEVNILRE 55
Query: 153 LAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
L H N+V++Y+ D + +YI ME CEGG+L A++I +K+ +
Sbjct: 56 LK-HPNIVRYYDRIIDRSNQTLYIVMEYCEGGDL-----AQLIQKC---------KKERK 100
Query: 211 YTEKDAAV-VVRQMLRVAAECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
Y E++ ++ Q+L ECH + ++HRD+KP N +F A ++K DFGL+
Sbjct: 101 YIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPAN-IFLDANN--NVKLGDFGLA 157
Query: 265 DFIKPGKKF-QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322
+ F + VG+ YY++PE L +SD+WS+G + Y L PF + +
Sbjct: 158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ 217
Query: 323 IFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHP 371
+ ++ K FRR P S+ + +K +L DP R + + L P
Sbjct: 218 LASKIKEGK--FRR--IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 5e-30
Identities = 85/283 (30%), Positives = 144/283 (50%), Gaps = 36/283 (12%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIE--KNKMILPIAVEDVKREVKILQALAGHEN 158
GKLLG G FG Y+ D G +AVK++ + V ++ E+++L+ L HE
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HER 65
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V++Y DD + I ME GG + D++ A ++ T+T RK YT
Sbjct: 66 IVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVT-------RK---YT----- 110
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP----GKKF 273
RQ+L H + +VHRD+K N L SA ++K DFG S ++ G
Sbjct: 111 ---RQILEGVEYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRLQTICSSGTGM 164
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRN 330
+ + G+ Y+++PEV+ + G ++DVWS+G T + + +P W + E IFK +
Sbjct: 165 KSVTGTPYWMSPEVISGEGYGRKADVWSVGC-TVVEMLTEKPPWAEFEAMAAIFK--IAT 221
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+P + P +S A++F+++ V++ + R +A + L H +V
Sbjct: 222 QPTNPQLP-SHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 118 bits (296), Expect = 7e-30
Identities = 86/301 (28%), Positives = 147/301 (48%), Gaps = 58/301 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE-----------KNKMILPIAVEDVKR 145
++ G L+G G FG Y+ + ++G+ +AVK++E K M+ + + R
Sbjct: 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSML-----DALAR 55
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
E+ +L+ L HEN+V++ + D +++ I +E GG ++ L +
Sbjct: 56 EIALLKELQ-HENIVQYLGSSLDADHLNIFLEYVPGGS---------VAALLNN------ 99
Query: 206 RKDSRYTEKDAAVV---VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 262
Y + +V VRQ+L+ H G++HRD+K N L + +K +DFG
Sbjct: 100 -----YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDN---KGGIKISDFG 151
Query: 263 LSDFI-------KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP 314
+S + K + GS +++APEV+K+ S ++D+WS+G + +L G+ P
Sbjct: 152 ISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHP 211
Query: 315 FWDKTE-DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
F D T+ IFK P+ PS IS+ A DF++K D R TAA+ L HP+
Sbjct: 212 FPDCTQLQAIFKIGENASPEI-----PSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266
Query: 373 V 373
+
Sbjct: 267 L 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 5e-29
Identities = 89/297 (29%), Positives = 140/297 (47%), Gaps = 51/297 (17%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DF+ TI KL+ +G +G Y+ K R A+KKI K +IL ++ V E IL
Sbjct: 2 DFE---TI-KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDIL-T 56
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
A + VV + +FE ++ + ME EGG+ +T L + L + Y
Sbjct: 57 FAENPFVVSMFCSFETKRHLCMVMEYVEGGD---------CATLLKNIGALPVDMARMYF 107
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF------ 266
+ V+ + L H +G+VHRD+KP+N L S +K TDFGLS
Sbjct: 108 AE--TVLALEYL------HNYGIVHRDLKPDNLLITSM---GHIKLTDFGLSKIGLMSLT 156
Query: 267 --------IKPGKKFQD--IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF 315
K ++F D + G+ Y+APEV+ R+ G D W++G+I Y L G PF
Sbjct: 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPF 216
Query: 316 WDKTEDGIFKEVLRNKPDFRRKPWP----SISNSAKDFVKKLLVKDPRARLTAAQAL 368
+ T + +F +V+ + + WP ++ A+D + +LL ++P RL A
Sbjct: 217 FGDTPEELFGQVISDDIE-----WPEGDEALPADAQDLISRLLRQNPLERLGTGGAF 268
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 1e-28
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 27/280 (9%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ I K +G GQF Y A +G VA+KK++ +M+ A +D +E+ +L+ L
Sbjct: 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-D 60
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR-YTEK 214
H NV+K+ +F ++N + I +EL + G+ L++MI +K R E+
Sbjct: 61 HPNVIKYLASFIENNELNIVLELADAGD-----LSRMIKHF---------KKQKRLIPER 106
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF- 273
Q+ H ++HRD+KP N +F +A +K D GL F
Sbjct: 107 TIWKYFVQLCSALEHMHSKRIMHRDIKPAN-VFITA--TGVVKLGDLGLGRFFSSKTTAA 163
Query: 274 QDIVGSAYYVAPEVLKRKSGPE--SDVWSIGVITYILLCGRRPFW-DKTE-DGIFKEVLR 329
+VG+ YY++PE + ++G SD+WS+G + Y + + PF+ DK + K++
Sbjct: 164 HSLVGTPYYMSPERI-HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI-- 220
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
K D+ P S +D V + + DP R + L
Sbjct: 221 EKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 1e-28
Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 36/288 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKI 149
D ++YT + +G G G Y A D A G VA+K++ ++ K L I V RE K
Sbjct: 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK- 74
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
H N+V + +++ + +++ ME GG L D + ++
Sbjct: 75 ------HPNIVNYLDSYLVGDELWVVMEYLAGGSLTD------------------VVTET 110
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P
Sbjct: 111 CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITP 167
Query: 270 GK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKE 326
+ K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ ++
Sbjct: 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
P+ + +S +DF+ + L D R +A + L HP+++
Sbjct: 228 ATNGTPELQNP--EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 1e-28
Identities = 72/282 (25%), Positives = 117/282 (41%), Gaps = 31/282 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DF+ IGK G FG + KA+ A+K+I+ +KM E + E ++L
Sbjct: 1 DFEILNKIGK----GSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAI-DEARVLAK 55
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
L ++++Y +F D + I ME E G+L + +
Sbjct: 56 L-DSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQR---------------GRPLP 99
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E Q+L A H ++HRD+K N ++K D G++ +
Sbjct: 100 EDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL---DAYDNVKIGDLGVAKLLSDNTN 156
Query: 273 F-QDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
F IVG+ YY++PE+ + K E SDVW++GV+ Y G+ PF + + +++R
Sbjct: 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG 216
Query: 331 KPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
P S + + L KD R R Q L +P
Sbjct: 217 ----VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 2e-28
Identities = 96/334 (28%), Positives = 141/334 (42%), Gaps = 84/334 (25%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK------ 144
DK R+Y I + LG G +G + A D+ + VA+KKI A +
Sbjct: 2 DKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFD-------AFRNATDAQRTF 54
Query: 145 REVKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWF 202
RE+ LQ L H N+VK N E+D +Y+ E E T L +
Sbjct: 55 REIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME--------------TDLHA--- 97
Query: 203 LAIRKD------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256
IR + RY ++ Q+L+ H ++HRD+KP N L S D +
Sbjct: 98 -VIRANILEDVHKRY-------IMYQLLKALKYIHSGNVIHRDLKPSNILLNS---DCRV 146
Query: 257 KATDFGLSDFIKPGKKFQ------DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 308
K DFGL+ + ++ D V + +Y APE+L + D+WS+G I +
Sbjct: 147 KLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEM 206
Query: 309 LCGRRPF----------------WDKTEDGI------FKE-VLRNKPDFRRKP----WPS 341
L G+ F + + I F +L + P RKP P
Sbjct: 207 LLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPK 266
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
S+ A D +KKLLV +P RLTA +AL HP+V +
Sbjct: 267 ASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 115 bits (288), Expect = 2e-28
Identities = 81/276 (29%), Positives = 139/276 (50%), Gaps = 28/276 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +A +K +G +VAVK ++ K E + EV I++ H+NVV+ Y
Sbjct: 29 IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQ-HQNVVEMY 84
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
++ +++ ME +GG L D I +R E+ A V +
Sbjct: 85 KSYLVGEELWVLMEFLQGGALTD------------------IVSQTRLNEEQIATVCESV 126
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYY 282
L+ H G++HRD+K ++ L D +K +DFG I K K + +VG+ Y+
Sbjct: 127 LQALCYLHSQGVIHRDIKSDSILLTL---DGRVKLSDFGFCAQISKDVPKRKSLVGTPYW 183
Query: 283 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APEV+ R G E D+WS+G++ ++ G P++ + K LR+ P + K
Sbjct: 184 MAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPPKLKNAHK 242
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377
IS +DF++++L ++P+ R TA + L HP++ + G
Sbjct: 243 ISPVLRDFLERMLTREPQERATAQELLDHPFLLQTG 278
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 7e-28
Identities = 86/312 (27%), Positives = 130/312 (41%), Gaps = 63/312 (20%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-----PIAVEDVKREVKILQA 152
Y +G G +G Y A D G VA+KK+ ++ L P++ RE+ +L+
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKV---RVPLSEEGIPLST---LREIALLKQ 54
Query: 153 L--AGHENVVKFYNAF---EDDNY--VYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
L H N+V+ + D + + E + + L L+K L
Sbjct: 55 LESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD--QDLATYLSKCPKPGLPPE----- 107
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
T KD ++RQ+LR H H +VHRD+KP+N L S D +K DFGL+
Sbjct: 108 ------TIKD---LMRQLLRGVDFLHSHRIVHRDLKPQNILVTS---DGQVKIADFGLAR 155
Query: 266 FIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-- 322
+V + +Y APEVL + S D+WS+G I L RRP + T +
Sbjct: 156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELF-RRRPLFRGTSEADQ 214
Query: 323 ---IF------------KEVLRNKPDFRRKP-------WPSISNSAKDFVKKLLVKDPRA 360
IF + V + F P I D +KK+L +P
Sbjct: 215 LDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHK 274
Query: 361 RLTAAQALSHPW 372
R++A +AL HP+
Sbjct: 275 RISAFEALQHPY 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 9e-28
Identities = 102/331 (30%), Positives = 150/331 (45%), Gaps = 64/331 (19%)
Query: 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
FG + RY + +G G FG A D+ G VA+KKI K P+ + RE+
Sbjct: 2 FGTVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMK-PFSTPVLAKRTYREL 60
Query: 148 KILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL 203
K+L+ L HEN++ F + ED +Y EL G L R+L
Sbjct: 61 KLLKHLR-HENIISLSDIFISPLED---IYFVTELL--GTDLHRLL-------------- 100
Query: 204 AIRKDSRYTEKD-AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 262
SR EK + Q+LR H G+VHRD+KP N L E+ LK DFG
Sbjct: 101 ----TSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN---ENCDLKICDFG 153
Query: 263 LSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDK-- 318
L+ P + V + YY APE++ +K E D+WS G I +L G+ F K
Sbjct: 154 LARIQDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH 211
Query: 319 -TEDGIFKEVLRNKPDF------------------RRKPWP------SISNSAKDFVKKL 353
+ I ++L PD +R+P P + SA D ++K+
Sbjct: 212 VNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKM 271
Query: 354 LVKDPRARLTAAQALSHPWVREGGDASEIPI 384
LV DP+ R++AA+AL+HP++ D ++ P+
Sbjct: 272 LVFDPQKRISAAEALAHPYLAPYHDPTDEPV 302
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 2e-27
Identities = 89/306 (29%), Positives = 130/306 (42%), Gaps = 42/306 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G G K G A+K I P + + RE++I ++ +VK+Y
Sbjct: 9 LGEGAGGSVTKCRLKNTGMIFALKTI--TTDPNPDLQKQILRELEINKSCK-SPYIVKYY 65
Query: 164 NAF--EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AF E + + IAME CEGG L D I K+ + R EK +
Sbjct: 66 GAFLDESSSSIGIAMEYCEGGSL-DSIYKKVKK------------RGGRIGEKVLGKIAE 112
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 280
+L+ + H ++HRD+KP N L +K DFG+S + + G++
Sbjct: 113 SVLKGLSYLHSRKIIHRDIKPSNILLT---RKGQVKLCDFGVSGELVNSLAG--TFTGTS 167
Query: 281 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLR---NKPDFR 335
+Y+APE ++ K SDVWS+G+ + R PF + E+L N P+
Sbjct: 168 FYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPE 227
Query: 336 RKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNN 391
K P S KDF+K+ L KDP R T L HPW++ A N
Sbjct: 228 LKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK----AQMKKK-----VN 278
Query: 392 MRQFVK 397
M +FV
Sbjct: 279 MAKFVA 284
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 2e-27
Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 30/282 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL--AG 155
Y +L+G G +G Y G VA+K I N V D++REV +L L +
Sbjct: 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKII--NLDTPDDDVSDIQREVALLSQLRQSQ 60
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
N+ K+Y ++ ++I ME EGG + + A I+ EK
Sbjct: 61 PPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIA------------------EKY 102
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQ 274
+V++R++L H G++HRD+K N L + ++K DFG++ + K
Sbjct: 103 ISVIIREVLVALKYIHKVGVIHRDIKAANILVTNT---GNVKLCDFGVAALLNQNSSKRS 159
Query: 275 DIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
VG+ Y++APEV+ + ++D+WS+G+ Y + G P+ D + ++KP
Sbjct: 160 TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKP 219
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
R S ++FV L ++P+ RL+A + L W++
Sbjct: 220 P--RLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIK 259
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 32/280 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K +I V E ++LQ H +
Sbjct: 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPFLTA 59
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+ + + ME GGEL F + ++ ++E A
Sbjct: 60 LKYSFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFSEDRARFYGA 102
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 280
+++ H +V+RD+K EN + +D +K TDFGL + I G + G+
Sbjct: 103 EIVSALGYLHSCDVVYRDLKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTP 159
Query: 281 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT-- 217
Query: 340 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 374
+S AK + LL KDP+ RL A + + H +
Sbjct: 218 --LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFA 255
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 3e-27
Identities = 84/285 (29%), Positives = 138/285 (48%), Gaps = 39/285 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG-HENVV 160
K+LG G FG +A K + AVK ++K+ ++ VE E ++L ALAG H +
Sbjct: 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVL-ALAGKHPFLT 59
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA---A 217
+ ++ F+ + ++ ME GG+L+ I++ R+ E A A
Sbjct: 60 QLHSCFQTKDRLFFVMEYVNGGDLM-----------------FHIQRSGRFDEPRARFYA 102
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 276
+ L+ H G+++RD+K +N L S + +K DFG+ + I G
Sbjct: 103 AEIVLGLQF---LHERGIIYRDLKLDNVLLDS---EGHIKIADFGMCKEGILGGVTTSTF 156
Query: 277 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ Y+APE+L + GP D W++GV+ Y +L G+ PF ED +F+ +L ++ +
Sbjct: 157 CGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP 216
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARL----TAAQAL-SHPWVRE 375
R +S AK +K L K+P RL T Q + HP+ RE
Sbjct: 217 R----WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 4e-27
Identities = 83/294 (28%), Positives = 133/294 (45%), Gaps = 50/294 (17%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-------LPIAVEDVKREVKILQAL 153
G+L+G G +G Y+A + G+ +AVK++E I V+ ++ E++ L+ L
Sbjct: 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL 65
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N+V++ + Y+ I +E GG ++ S +R R+ E
Sbjct: 66 D-HLNIVQYLGFETTEEYLSIFLEYVPGG-------------SIGS----CLRTYGRFEE 107
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+ Q+L A H G++HRD+K +N L + D K +DFG+S KK
Sbjct: 108 QLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDA---DGICKISDFGIS------KKS 158
Query: 274 QDIV---------GSAYYVAPEVLKRKSGPES---DVWSIGVITYILLCGRRPFWDKTE- 320
DI GS +++APEV+ S S D+WS+G + + GRRP W E
Sbjct: 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP-WSDEEA 217
Query: 321 -DGIFK-EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
+FK R+ P ++S A DF+ +P R TA + L HP+
Sbjct: 218 IAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 5e-27
Identities = 93/307 (30%), Positives = 142/307 (46%), Gaps = 69/307 (22%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK----REVKILQALAGHENV 159
+G G +G Y A DK G+ VA+KKI L E V RE+ +L+ L H N+
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKIR-----LETEDEGVPSTAIREISLLKELN-HPNI 60
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAK-MISTTLTSAWFLAIRKDSRYTEKDAAV 218
V+ + +N +Y+ E LD L K M S+ LT D +
Sbjct: 61 VRLLDVVHSENKLYLVFEF------LDLDLKKYMDSSPLTG--------------LDPPL 100
Query: 219 V---VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-FIKPGKKFQ 274
+ + Q+L+ A CH H ++HRD+KP+N L + +LK DFGL+ F P + +
Sbjct: 101 IKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR---EGALKLADFGLARAFGVPVRTYT 157
Query: 275 DIVGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--EV 327
V + +Y APE+L ++ S P D+WSIG I + + RRP + D D +F+
Sbjct: 158 HEVVTLWYRAPEILLGSRQYSTP-VDIWSIGCI-FAEMVNRRPLFPGDSEIDQLFRIFRT 215
Query: 328 L-----------RNKPDF-------RRKPW----PSISNSAKDFVKKLLVKDPRARLTAA 365
L + PD+ R+ P++ D + K+LV DP R++A
Sbjct: 216 LGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAK 275
Query: 366 QALSHPW 372
AL HP+
Sbjct: 276 AALQHPY 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 5e-27
Identities = 88/331 (26%), Positives = 139/331 (41%), Gaps = 68/331 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDK--ANGDRVAVKKIEK--NKMILPIAVEDVKREVKILQA 152
RY + K LG G +G A + + + VA+KKI +K IL + RE+K+L+
Sbjct: 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKIL---AKRALRELKLLRH 57
Query: 153 LAGHENVVKFY---NAFEDD-NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
GH+N+ Y F + N +Y+ EL E L ++I R
Sbjct: 58 FRGHKNITCLYDMDIVFPGNFNELYLYEELMEAD------LHQII------------RSG 99
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
T+ + Q+L H ++HRD+KP N L + D LK DFGL+
Sbjct: 100 QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNA---DCELKICDFGLARGFS 156
Query: 269 PGKKFQD-----IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD---- 317
V + +Y APE++ DVWS+G I LL GR+P +
Sbjct: 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELL-GRKPVFKGKDY 215
Query: 318 -------------KTEDGIFK-------EVLRNKPDFRRKPWPSI----SNSAKDFVKKL 353
E+ + + +R+ P+ +KP+ SI + A D ++KL
Sbjct: 216 VDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKL 275
Query: 354 LVKDPRARLTAAQALSHPWVREGGDASEIPI 384
L DP R++ +AL HP++ D + P+
Sbjct: 276 LAFDPTKRISVEEALEHPYLAIWHDPDDEPV 306
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 6e-27
Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 35/282 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y ++LG G FG + + V K++ ++ D E+ IL L H
Sbjct: 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKER-RDALNEIVILSLLQ-H 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N++ +YN F DDN + I ME GG L D+I+ +K + E+
Sbjct: 59 PNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVR---------------QKGQLFEEEMV 103
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF-- 273
+ Q++ + H G++HRD+K N FL K +K DFG+S G ++
Sbjct: 104 LWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK----AGLIKLGDFGISK--ILGSEYSM 157
Query: 274 -QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRN 330
+ +VG+ YY++PE+ + +SD+W++G + Y LL +R F + + K V N
Sbjct: 158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGN 217
Query: 331 KPDFRRKPWPSISNSA-KDFVKKLLVKDPRARLTAAQALSHP 371
P S+ +S V LL +DP R TA + L P
Sbjct: 218 -----YTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 7e-27
Identities = 84/284 (29%), Positives = 139/284 (48%), Gaps = 47/284 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIA--VEDVKREVKILQALAGHE 157
++LG G +G ++ D ++ K+ K I+ A E + E ++L+A+
Sbjct: 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCP 65
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V + AF+ D +++ ++ GGEL F + + +TE +
Sbjct: 66 FLVTLHYAFQTDTKLHLILDYVNGGEL-----------------FTHLYQREHFTESEVR 108
Query: 218 VVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ- 274
V + ++ V A HLH G+++RD+K EN L S + + TDFGLS ++ +
Sbjct: 109 VYIAEI--VLALDHLHQLGIIYRDIKLENILLDS---EGHVVLTDFGLSKEFLAEEEERA 163
Query: 275 -DIVGSAYYVAPEVLKRKSGPESDV---WSIGVITYILLCGRRPFWDKTEDG-------I 323
G+ Y+APEV++ SG WS+GV+T+ LL G PF T DG I
Sbjct: 164 YSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPF---TVDGEQNSQSEI 220
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 367
+ +L++KP F ++S A+DF++KLL KDP+ RL A A
Sbjct: 221 SRRILKSKPPFP----KTMSAEARDFIQKLLEKDPKKRLGANGA 260
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-26
Identities = 75/284 (26%), Positives = 135/284 (47%), Gaps = 34/284 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I K +G G FG Y+A K++ + +K+I+ KM P+ ++ ++ IL A H
Sbjct: 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM--PVKEKEASKKEVILLAKMKH 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK---MISTTLTSAWFLAIRKDSRYTE 213
N+V F+ +F+++ ++I ME C+GG+L+ RI + + S +WF+ I ++
Sbjct: 59 PNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHI- 117
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKK 272
H ++HRD+K +N FL K+ K DFG++ + +
Sbjct: 118 -----------------HDRKILHRDIKSQNIFLSKNGM---VAKLGDFGIARQLNDSME 157
Query: 273 F-QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
VG+ YY++PE+ + R ++D+WS+G + Y L + PF E +++
Sbjct: 158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPF----EGNNLHQLVLK 213
Query: 331 KPDFRRKPW-PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P P+ S + + +L PR R + L P++
Sbjct: 214 ICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 1e-26
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 32/282 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A K +G AVK ++K+ ++ VE E +IL H + +
Sbjct: 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y F+ + ++ ME GG+L+ I+K R+ E A
Sbjct: 61 LYCCFQTPDRLFFVMEFVNGGDLM-----------------FHIQKSRRFDEARARFYAA 103
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 280
++ H G+++RD+K +N L + K DFG+ + I GK G+
Sbjct: 104 EITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFCGTP 160
Query: 281 YYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APE+L+ GP D W++GV+ Y +LCG PF + ED +F+ +L ++ + W
Sbjct: 161 DYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY--PTW 218
Query: 340 PSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVRE 375
+S A D +K + K+P RL + L HP+ +E
Sbjct: 219 --LSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-26
Identities = 65/245 (26%), Positives = 98/245 (40%), Gaps = 62/245 (25%)
Query: 99 TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
T+GK LG G FG VAVK ++++ +E+ RE +I++ L
Sbjct: 2 TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDAS--EQQIEEFLREARIMRKL- 58
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H NVVK ++ +YI ME EGG+LL +L +
Sbjct: 59 DHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLS---------------YLRKNRP------ 97
Query: 215 DAAVVVRQMLRVAAE-----CHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + +L A + +L +HRD+ N L E+ +K +DFGLS +
Sbjct: 98 --KLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDL 152
Query: 268 KPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 314
YY APE LK K +SDVWS GV+ + I G +P
Sbjct: 153 YDDD---------YYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQP 203
Query: 315 FWDKT 319
+ +
Sbjct: 204 YPGMS 208
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 2e-26
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 38/293 (12%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
D ++ +T + +GHG FG Y A D + VA+KK+ + +D+ +EV+
Sbjct: 9 SKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRF 68
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEG--GELLDRILAKMISTTLTSAWFLAIRK 207
LQ L H N +++ + ++ ++ ME C G ++L+ +K
Sbjct: 69 LQQLR-HPNTIEYKGCYLREHTAWLVMEYCLGSASDILE-----------------VHKK 110
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ E + A + L+ A H H +HRD+K N L E ++K DFG + +
Sbjct: 111 PLQ--EVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLV 165
Query: 268 KPGKKFQDIVGSAYYVAPEV-LKRKSGP---ESDVWSIGVITYILLCGRRP--FWDKTED 321
P F VG+ Y++APEV L G + DVWS+G IT I L R+P F
Sbjct: 166 SPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMS 221
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
++ + P W S+ ++FV L K P+ R ++ + L H +V
Sbjct: 222 ALYHIAQNDSPTLSSNDW---SDYFRNFVDSCLQKIPQDRPSSEELLKHRFVL 271
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 2e-26
Identities = 85/332 (25%), Positives = 139/332 (41%), Gaps = 69/332 (20%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI-AVEDVK---REVK 148
+ RY +G G +G A D G +VA+KK+ + P + K RE++
Sbjct: 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSR-----PFQSAIHAKRTYRELR 66
Query: 149 ILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWF 202
+L+ + HENV+ + F ED VY+ L G L+ I+
Sbjct: 67 LLKHMD-HENVIGLLDVFTPASSLEDFQDVYLVTHLM--GADLNNIV------------- 110
Query: 203 LAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 262
K + ++ +V Q+LR H G++HRD+KP N + ED LK DFG
Sbjct: 111 ----KCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFG 163
Query: 263 LSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR-------- 312
L+ + V + +Y APE++ D+WS+G I LL G+
Sbjct: 164 LAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH 221
Query: 313 ---------------RPFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKKL 353
K + +++ P +K + + + A D ++K+
Sbjct: 222 IDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKM 281
Query: 354 LVKDPRARLTAAQALSHPWVREGGDASEIPID 385
LV DP R+TAA+AL+HP++ E D + P+
Sbjct: 282 LVLDPDKRITAAEALAHPYLAEYHDPEDEPVA 313
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 5e-26
Identities = 63/245 (25%), Positives = 96/245 (39%), Gaps = 61/245 (24%)
Query: 99 TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
T+GK LG G FG T VAVK ++++ +E+ RE +I++ L
Sbjct: 2 TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDAS--EQQIEEFLREARIMRKL- 58
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N+VK ++ + I ME GG+LLD + +
Sbjct: 59 DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKN----------------------R 96
Query: 215 DAAVVVRQMLRVAAE-----CHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + +L A + +L +HRD+ N L E+ +K +DFGLS +
Sbjct: 97 PKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDL 153
Query: 268 KPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 314
YY APE LK K +SDVWS GV+ + I G P
Sbjct: 154 YDDD---------YYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEP 204
Query: 315 FWDKT 319
+ +
Sbjct: 205 YPGMS 209
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 5e-26
Identities = 79/284 (27%), Positives = 138/284 (48%), Gaps = 28/284 (9%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G + A D A G VA+K+I K E + E+ +++
Sbjct: 16 DPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKE 72
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
L + N+V F ++F + +++ ME GG L D + ++
Sbjct: 73 LK-NPNIVNFLDSFLVGDELFVVMEYLAGGSLTD------------------VVTETCMD 113
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 271
E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P +
Sbjct: 114 EAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM---DGSVKLTDFGFCAQITPEQS 170
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN 230
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ P +S +DF+ + L D R +A + L HP+++
Sbjct: 231 GTPELQNP-EKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 6e-26
Identities = 85/316 (26%), Positives = 137/316 (43%), Gaps = 65/316 (20%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG + K G A+KK+ K++M+ V V+ E IL A A + VVK
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDIL-AEADNPWVVK 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y +F+D+NY+Y+ ME GG+++ L ++KD+ +TE++ +
Sbjct: 66 LYYSFQDENYLYLIMEYLPGGDMMT----------------LLMKKDT-FTEEETRFYIA 108
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL---------SDF------ 266
+ + H G +HRD+KP+N L + +K +DFGL ++F
Sbjct: 109 ETILAIDSIHKLGYIHRDIKPDNLLLDA---KGHIKLSDFGLCTGLKKSHRTEFYRILSH 165
Query: 267 IKPGKKFQDI------------------------VGSAYYVAPEVLKRKS-GPESDVWSI 301
P I VG+ Y+APEV + E D WS+
Sbjct: 166 ALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSL 225
Query: 302 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 361
GVI Y +L G PF +++++ K + +S AKD +K+L + R
Sbjct: 226 GVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERR 284
Query: 362 LTAAQA---LSHPWVR 374
L SHP+ +
Sbjct: 285 LGNNGVNEIKSHPFFK 300
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 108 bits (270), Expect = 7e-26
Identities = 79/263 (30%), Positives = 125/263 (47%), Gaps = 27/263 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 59
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AF+ + + ME GGEL F + ++ +TE+ A
Sbjct: 60 LKYAFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFTEERARFYGA 102
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 280
+++ H +V+RD+K EN + +D +K TDFGL + I G + G+
Sbjct: 103 EIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTP 159
Query: 281 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 216
Query: 340 PSISNSAKDFVKKLLVKDPRARL 362
++S AK + LL KDP+ RL
Sbjct: 217 -TLSPEAKSLLAGLLKKDPKQRL 238
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 7e-26
Identities = 93/337 (27%), Positives = 141/337 (41%), Gaps = 77/337 (22%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKI 149
D RY +G G +G AT K G +VA+KKI E RE+KI
Sbjct: 2 DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQ-----RTLREIKI 56
Query: 150 LQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS----A 200
L+ HEN++ + +FE N VYI EL E L K+I T S
Sbjct: 57 LRRFK-HENIIGILDIIRPPSFESFNDVYIVQELMETD------LYKLIKTQHLSNDHIQ 109
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
+FL Y Q+LR H ++HRD+KP N L + LK D
Sbjct: 110 YFL-------Y----------QILRGLKYIHSANVLHRDLKPSNLLLNTN---CDLKICD 149
Query: 261 FGLSDFIKP----GKKFQDIVGSAYYVAPEV-LKRKSGPES-DVWSIGVITYILLCGRRP 314
FGL+ P + V + +Y APE+ L K ++ D+WS+G I +L R
Sbjct: 150 FGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPL 209
Query: 315 FWDK----------------TEDGIF-------KEVLRNKPDFRRKPW----PSISNSAK 347
F K +++ + + +++ P + PW P+ A
Sbjct: 210 FPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKAL 269
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
D + K+L +P R+T +AL+HP++ + D S+ P+
Sbjct: 270 DLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPV 306
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 8e-26
Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 37/282 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIE-KNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG Y A +K G A K IE K++ L ED E++IL A H +VK
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL----EDYMVEIEIL-ATCNHPYIVKL 74
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
AF D ++I +E C GG + D I+ ++ D TE V+ RQ
Sbjct: 75 LGAFYWDGKLWIMIEFCPGGAV-DAIMLEL---------------DRGLTEPQIQVICRQ 118
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 281
ML H ++HRD+K N L D +K DFG+S +K ++ +G+ Y
Sbjct: 119 MLEALQYLHSMKIIHRDLKAGNVLLT---LDGDIKLADFGVSAKNVKTLQRRDSFIGTPY 175
Query: 282 YVAPEVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
++APEV+ K P ++D+WS+G+ + P + + ++ +++P
Sbjct: 176 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL 235
Query: 336 RKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+P W S +DF+K L K P R +AAQ L HP+V
Sbjct: 236 SQPSKW---SMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 36/279 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
+ LG G FG +AT K N D VA+K+ EK+K+I V+ V E KIL + H
Sbjct: 36 RTLGTGSFGRVILATYK-NEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFC 93
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
V Y +F+D++Y+Y+ +E GGE +F +R++ R+
Sbjct: 94 VNLYGSFKDESYLYLVLEFVIGGE-----------------FFTFLRRNKRFPNDVGCFY 136
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 279
Q++ + +V+RD+KPEN L +D +K TDFG + + + + G+
Sbjct: 137 AAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVD--TRTYTLCGT 191
Query: 280 AYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338
Y+APE+ L G +D W++G+ Y +L G PF+ I++++L F +
Sbjct: 192 PEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK-- 249
Query: 339 WPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPW 372
+ N+ K +KKLL D R A HPW
Sbjct: 250 --FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW 286
|
Length = 340 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 87/301 (28%), Positives = 136/301 (45%), Gaps = 59/301 (19%)
Query: 107 GQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVKFYN 164
G +G Y A DK G+ VA+KK+ EK K PI RE+ IL L H N+V
Sbjct: 16 GTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITS---LREINILLKL-QHPNIVTVKE 71
Query: 165 AF--EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
+ + +Y+ ME E +L K + T+ + + K ++ Q
Sbjct: 72 VVVGSNLDKIYMVMEYVEH-DL------KSLMETMKQPFLQSEVK----------CLMLQ 114
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 281
+L A H + ++HRD+K N L + LK DFGL+ ++ P K + +V + +
Sbjct: 115 LLSGVAHLHDNWILHRDLKTSNLLLNNRGI---LKICDFGLAREYGSPLKPYTQLVVTLW 171
Query: 282 YVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV----LRNK 331
Y APE+L ++ D+WS+G I LL + F K+E + IFK + +
Sbjct: 172 YRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIW 231
Query: 332 PDF-------------------RRK-PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
P F R+K P S+S++ D + +LL DP R++A AL HP
Sbjct: 232 PGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHP 291
Query: 372 W 372
+
Sbjct: 292 Y 292
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 2e-25
Identities = 80/282 (28%), Positives = 132/282 (46%), Gaps = 40/282 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK--REVKILQALA 154
+Y + +++G G FG + + + A+K+I LP + V+ R+ +L A
Sbjct: 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIR-----LPKSSSAVEDSRKEAVLLAKM 55
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI---LAKMISTTLTSAWFLAIRKDSRY 211
H N+V F +FE D ++YI ME C+GG+L+ +I K+ WF+
Sbjct: 56 KHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFV-------- 107
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI-KP 269
QM H ++HRD+K +N FL ++ K +K DFG + + P
Sbjct: 108 ----------QMCLGVQHIHEKRVLHRDIKSKNIFLTQNGK----VKLGDFGSARLLTSP 153
Query: 270 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
G VG+ YYV PE+ + +SD+WS+G I Y L + PF + +K ++
Sbjct: 154 GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPF----QANSWKNLI 209
Query: 329 RNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALS 369
KP PS S + +K++ ++PR+R +A LS
Sbjct: 210 LKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILS 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 2e-25
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 61/303 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK----REVKILQALAGHENV 159
+G G +G Y A +K G+ VA+KKI L E V RE+ +L+ L H N+
Sbjct: 8 IGEGTYGVVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKEL-NHPNI 61
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
VK + +N +Y+ E L + L K + + S L + K +
Sbjct: 62 VKLLDVIHTENKLYLVFEF------LHQDLKKFMDASPLSGIPLPLIKSYLF-------- 107
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-FIKPGKKFQDIVG 278
Q+L+ A CH H ++HRD+KP+N L + ++K DFGL+ F P + + V
Sbjct: 108 --QLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVV 162
Query: 279 SAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN---- 330
+ +Y APE+L K S D+WS+G I ++ R F +E D +F+ + R
Sbjct: 163 TLWYRAPEILLGCKYYSTA-VDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGTP 220
Query: 331 --------------KPDF---RRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 369
KP F R+ + P + +D + ++L DP R++A AL+
Sbjct: 221 DEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280
Query: 370 HPW 372
HP+
Sbjct: 281 HPF 283
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 106 bits (265), Expect = 4e-25
Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 32/266 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H +
Sbjct: 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 59
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+ + + ME GGEL F + ++ ++E A
Sbjct: 60 LKYSFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFSEDRARFYGA 102
Query: 222 QMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIV 277
++ V+A +LH +V+RD+K EN + +D +K TDFGL + IK G +
Sbjct: 103 EI--VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFC 157
Query: 278 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 158 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 217
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARL 362
++S AK + LL KDP+ RL
Sbjct: 218 ----TLSPEAKSLLSGLLKKDPKQRL 239
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 6e-25
Identities = 86/310 (27%), Positives = 147/310 (47%), Gaps = 60/310 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALAGHENVV 160
+G G +G Y A D+ + +A+KKI ++++ + A+ RE+ +L+ + H N+V
Sbjct: 10 IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAI----REISLLKEMQ-HGNIV 64
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVV 220
+ + + +Y+ E LD L K + ++ A + K Y
Sbjct: 65 RLQDVVHSEKRLYLVFEY------LDLDLKKHMDSSPDFAKNPRLIKTYLY--------- 109
Query: 221 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-FIKPGKKFQDIVGS 279
Q+LR A CH H ++HRD+KP+N L + ++LK DFGL+ F P + F V +
Sbjct: 110 -QILRGIAYCHSHRVLHRDLKPQNLLID--RRTNALKLADFGLARAFGIPVRTFTHEVVT 166
Query: 280 AYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFKEVLR----- 329
+Y APE+L + S P D+WS+G I + + ++P + D D +FK + R
Sbjct: 167 LWYRAPEILLGSRHYSTP-VDIWSVGCI-FAEMVNQKPLFPGDSEIDELFK-IFRILGTP 223
Query: 330 ---------NKPDFRRK--PW---------PSISNSAKDFVKKLLVKDPRARLTAAQALS 369
+ PD++ W P++ + D + K+L DP R+TA AL
Sbjct: 224 NEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283
Query: 370 HPWVREGGDA 379
H + ++ GDA
Sbjct: 284 HEYFKDLGDA 293
|
Length = 294 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 105 bits (262), Expect = 6e-25
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 34/303 (11%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
GV+ + D Y D + + +GHG FG Y AT+ + VAVKK+ +
Sbjct: 3 GVVKDPEIADLFYKDDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTN 62
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
+D+ +EVK LQ L H N +++ + ++ ++ ME C G
Sbjct: 63 EKWQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAWLVMEYCLG---------------- 105
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257
+++ L + K E + A + L+ A H H ++HRD+K N L E +K
Sbjct: 106 SASDLLEVHKKP-LQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVK 161
Query: 258 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRR 313
DFG + P F VG+ Y++APEV+ + + + DVWS+G IT I L R+
Sbjct: 162 LADFGSASKSSPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERK 217
Query: 314 P--FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
P F ++ + P + W ++S + FV L K P+ R +A+ L H
Sbjct: 218 PPLFNMNAMSALYHIAQNDSPTLQSNEW---TDSFRGFVDYCLQKIPQERPASAELLRHD 274
Query: 372 WVR 374
+VR
Sbjct: 275 FVR 277
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 7e-25
Identities = 84/293 (28%), Positives = 131/293 (44%), Gaps = 47/293 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK-----REVKILQALAGHEN 158
LG G +G Y + G +A+K+I + +++ K E+ IL
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEIR-------LELDESKFNQIIMELDILHKAVSPY- 60
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V FY AF + VY+ ME + G L D++ A ++T +
Sbjct: 61 IVDFYGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATE---------GIPEDVLRRITYA 110
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 277
VV+ + + E H ++HRD+KP N L + +K DFG+S + + K +
Sbjct: 111 VVKGLKFLKEE---HNIIHRDVKPTNVLVNGNGQ---VKLCDFGVSGNLVASLAKTN--I 162
Query: 278 GSAYYVAPEVLKRKSGP--------ESDVWSIGVITYILLCGRRPFWDKTEDGIFKE--- 326
G Y+APE +K GP +SDVWS+G+ + GR P+ +T IF +
Sbjct: 163 GCQSYMAPERIK-SGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSA 221
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379
++ P P S+ A+DFV K L K P R T AQ L HPW+ + +A
Sbjct: 222 IVDGDPP--TLP-SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-24
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 39/290 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ + +L+G+G +G Y G A+K ++ + E++K+E+ +L+ + H
Sbjct: 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHR 63
Query: 158 NVVKFYNAFED------DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
N+ +Y AF D+ +++ ME C G + D ++ TL W
Sbjct: 64 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD-LIKNTKGNTLKEEWI--------- 113
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPG 270
A + R++LR + H H ++HRD+K +N L E++ +K DFG+S +
Sbjct: 114 -----AYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTV 165
Query: 271 KKFQDIVGSAYYVAPEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIF 324
+ +G+ Y++APEV+ P+ SD+WS+G+ + G P D
Sbjct: 166 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL 225
Query: 325 KEVLRN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ RN P + K W S + F++ LVK+ R T Q + HP++
Sbjct: 226 FLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 73/283 (25%), Positives = 130/283 (45%), Gaps = 33/283 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG G FG +A K + A+K ++K+ ++ V+ E +IL A H +
Sbjct: 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTA 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ F+ + ++ ME GG+L+ I++ ++ E +
Sbjct: 61 LHCCFQTKDRLFFVMEYVNGGDLM-----------------FQIQRSRKFDEPRSRFYAA 103
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 280
++ H HG+++RD+K +N L + + K DFG+ + I G G+
Sbjct: 104 EVTLALMFLHRHGVIYRDLKLDNILLDA---EGHCKLADFGMCKEGILNGVTTTTFCGTP 160
Query: 281 YYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APE+L+ + GP D W++GV+ Y ++ G+ PF ED +F+ +L + D W
Sbjct: 161 DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD--DVLYPVW 218
Query: 340 PSISNSAKDFVKKLLVKDPRARL--TAAQALS-----HPWVRE 375
+S A +K + K+P RL A+Q HP+ +E
Sbjct: 219 --LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 104 bits (259), Expect = 1e-24
Identities = 78/288 (27%), Positives = 137/288 (47%), Gaps = 36/288 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA+K++ + K+E+ I +
Sbjct: 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQ--------QQPKKELIINEI 67
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L E N+V + +++ + +++ ME GG L D + +
Sbjct: 68 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD------------------VVTE 109
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I
Sbjct: 110 TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQIT 166
Query: 269 PGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
P + K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++
Sbjct: 167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL 226
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ N + P +S +DF+ + L D R +A + L HP+++
Sbjct: 227 IATNGTPELQNP-ERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-24
Identities = 84/314 (26%), Positives = 138/314 (43%), Gaps = 65/314 (20%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQ 151
++ + K+ G G +G + ++ G VA+KK E + +I IA+ RE+++L+
Sbjct: 1 EKYEKLSKI-GEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIAL----REIRMLK 55
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGEL--LDRILAKMISTTLTSAWFLAIRKDS 209
L H N+V F +++ E C+ L L++ + I+K
Sbjct: 56 QLK-HPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPE--------HLIKK-- 104
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK- 268
++ Q L+ CH H +HRD+KPEN L + +K DFG + +
Sbjct: 105 ---------IIWQTLQAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTG 152
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED----- 321
PG + D V + +Y APE+L + GP DVW+IG + LL G +P W D
Sbjct: 153 PGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTG-QPLWPGKSDVDQLY 211
Query: 322 ------GIF----KEVLRNKPDFR---------RKP----WPSISNSAKDFVKKLLVKDP 358
G +++ F+ R+P +P+IS+ A F+K L DP
Sbjct: 212 LIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDP 271
Query: 359 RARLTAAQALSHPW 372
RL+ + L HP+
Sbjct: 272 TERLSCEELLEHPY 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 2e-24
Identities = 96/337 (28%), Positives = 147/337 (43%), Gaps = 82/337 (24%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVK---REVK 148
D +Y K +G G +G A + ++VA+KKI N++ D K RE+K
Sbjct: 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRI-------DAKRTLREIK 56
Query: 149 ILQALAGHENVVKF--------YNAFEDDNYVYIAMELCEGGELLDRILAKMI--STTLT 198
+L+ L HENV+ AF D VYI EL+D L ++I S TL+
Sbjct: 57 LLRHLD-HENVIAIKDIMPPPHREAFND---VYIVY------ELMDTDLHQIIRSSQTLS 106
Query: 199 SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258
+Y + Q+LR H ++HRD+KP N L + + LK
Sbjct: 107 D-------DHCQY-------FLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKI 149
Query: 259 TDFGLSDFIKPGKKFQ-DIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPF 315
DFGL+ F + V + +Y APE+L S DVWS+G I LL GR+P
Sbjct: 150 CDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELL-GRKPL 208
Query: 316 W-------------------DKTEDGIF-----KEVLRNKPDFRRKP----WPSISNSAK 347
+ + + G + +R+ P R+ +P + A
Sbjct: 209 FPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAI 268
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
D ++K+LV DP R+T +AL+HP++ D S+ P+
Sbjct: 269 DLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPV 305
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 2e-24
Identities = 80/279 (28%), Positives = 122/279 (43%), Gaps = 51/279 (18%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR------ 145
+DFD K++G G FG + K++ A+K + K +MI KR
Sbjct: 43 EDFDVI----KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMI--------KRSDSAFF 90
Query: 146 -EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E + + A A E +V+ + AF+DD Y+Y+ ME GG+L+ L S + +
Sbjct: 91 WEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLV----------NLMSNYDIP 140
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
EK A +++ H G +HRD+KP+N L LK DFG
Sbjct: 141 --------EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK---SGHLKLADFGTC 189
Query: 265 DFIKPGKKFQ----DIVGSAYYVAPEVLKRKS-----GPESDVWSIGVITYILLCGRRPF 315
+K VG+ Y++PEVLK + G E D WS+GV Y +L G PF
Sbjct: 190 --MKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247
Query: 316 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 354
+ + G + +++ +K IS AKD + L
Sbjct: 248 YADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFL 286
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 93/340 (27%), Positives = 135/340 (39%), Gaps = 88/340 (25%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVK 144
+F + + + + K+ G G FG + A K VA+KK+ E K PI
Sbjct: 4 EFPFCDEVSKYEKLAKI-GQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITA---L 59
Query: 145 REVKILQALAGHENVVKF----------YNAFEDDNYVYIAMELCEGGELLDRILAKMIS 194
RE+KILQ L HENVV YN ++ Y+ E CE LA ++S
Sbjct: 60 REIKILQLLK-HENVVNLIEICRTKATPYNRYKGS--FYLVFEFCEHD------LAGLLS 110
Query: 195 TTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254
K+ ++T + V++ +L H + ++HRDMK N L +D
Sbjct: 111 N-----------KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT---KDG 156
Query: 255 SLKATDFGLS-DFIKP----GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVI--- 304
LK DFGL+ F ++ + V + +Y PE+L +R GP D+W G I
Sbjct: 157 ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAE 216
Query: 305 -----------------TYIL-LCG-----------RRPFWDKTE---DGIFKEVLRNKP 332
T I LCG + + K E K R KP
Sbjct: 217 MWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKP 276
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
+ A D + KLLV DP R+ A AL+H +
Sbjct: 277 YVK-------DPHALDLIDKLLVLDPAKRIDADTALNHDF 309
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 3e-24
Identities = 68/284 (23%), Positives = 124/284 (43%), Gaps = 35/284 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED----VKREVKILQA 152
+Y +++G G FG ++ KA+ V +K+I +M +D + E ++L+
Sbjct: 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-----TKDERLAAQNECQVLKL 55
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
L+ H N++++Y F +D + I ME GG L + ++ R +S
Sbjct: 56 LS-HPNIIEYYENFLEDKALMIVMEYAPGGTLAE---------------YIQKRCNSLLD 99
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E Q+L H ++HRD+K +N L K +K DFG+S + K
Sbjct: 100 EDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKILSSKSK 157
Query: 273 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
+VG+ Y++PE+ + K +SD+W++G + Y L +R F + +++
Sbjct: 158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT 217
Query: 332 --PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P R S + + +L DP R +Q ++ P
Sbjct: 218 FAPISDR-----YSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 3e-24
Identities = 85/305 (27%), Positives = 143/305 (46%), Gaps = 37/305 (12%)
Query: 83 GKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED 142
GK F D + I + +G G +G + +K NG + AVK ++ I E+
Sbjct: 5 GKTIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI----DEE 60
Query: 143 VKREVKILQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAKMISTTL 197
++ E IL+AL+ H NVVKFY + ++ + +++ +ELC GG + D L K
Sbjct: 61 IEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTD--LVKGF---- 114
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257
+++ R E A ++ + L H++ +HRD+K N L + + +K
Sbjct: 115 -------LKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT---EGGVK 164
Query: 258 ATDFGLSDFIKPGKKFQDI-VGSAYYVAPEVLKRKSGPES------DVWSIGVITYILLC 310
DFG+S + + ++ VG+ +++APEV+ + +S DVWS+G+ L
Sbjct: 165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD 224
Query: 311 GRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
G P D ++ RN P +P W SN DF++K L KD R T + L
Sbjct: 225 GDPPLADLHPMRALFKIPRNPPPTLHQPELW---SNEFNDFIRKCLTKDYEKRPTVSDLL 281
Query: 369 SHPWV 373
H ++
Sbjct: 282 QHVFI 286
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 3e-24
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 27/263 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA+G A+K ++K +I V E ++L+ H +
Sbjct: 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKN-TRHPFLTS 59
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+ + + ME GGEL F + ++ ++E
Sbjct: 60 LKYSFQTKDRLCFVMEYVNGGEL-----------------FFHLSRERVFSEDRTRFYGA 102
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 280
+++ H +V+RD+K EN + +D +K TDFGL + I + G+
Sbjct: 103 EIVSALDYLHSGKIVYRDLKLENLMLD---KDGHIKITDFGLCKEGITDAATMKTFCGTP 159
Query: 281 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L F R
Sbjct: 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPR--- 216
Query: 340 PSISNSAKDFVKKLLVKDPRARL 362
++S AK + LL+KDP RL
Sbjct: 217 -TLSADAKSLLSGLLIKDPNKRL 238
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 4e-24
Identities = 72/266 (27%), Positives = 121/266 (45%), Gaps = 28/266 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN--VVK 161
+G G FG Y K A+K + K +++ V E IL E+ +V
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+F+ D+ +Y+ + GGEL F ++K+ R++E A +
Sbjct: 61 LKFSFQTDSDLYLVTDYMSGGEL-----------------FWHLQKEGRFSEDRAKFYIA 103
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKPGKKFQDIVGSA 280
+++ H + +V+RD+KPEN L + + DFGLS + K G+
Sbjct: 104 ELVLALEHLHKYDIVYRDLKPENILLDA---TGHIALCDFGLSKANLTDNKTTNTFCGTT 160
Query: 281 YYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338
Y+APEVL + G D WS+GV+ + + CG PF+ + +++ + K F P
Sbjct: 161 EYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF---P 217
Query: 339 WPSISNSAKDFVKKLLVKDPRARLTA 364
+S+ + FVK LL ++P+ RL A
Sbjct: 218 KNVLSDEGRQFVKGLLNRNPQHRLGA 243
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 6e-24
Identities = 84/291 (28%), Positives = 143/291 (49%), Gaps = 45/291 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR------EVKILQ 151
+ +GKLLG G FG Y+ D G +AVK+++ + P + E K E+++L+
Sbjct: 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFD----PESPETSKEVNALECEIQLLK 59
Query: 152 ALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
L HE +V++Y D + + I ME GG + D+ L S L
Sbjct: 60 NLL-HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQ---------LKSYGALTENVTR 109
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK- 268
+YT RQ+L + H + +VHRD+K N L S ++K DFG S ++
Sbjct: 110 KYT--------RQILEGVSYLHSNMIVHRDIKGANILRDSV---GNVKLGDFGASKRLQT 158
Query: 269 ---PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE--DG 322
G + + G+ Y+++PEV+ + G ++D+WS+G T + + +P W + E
Sbjct: 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGC-TVVEMLTEKPPWAEFEAMAA 217
Query: 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
IFK + +P P P +S+ +DF+K++ V + + R +A + L H +V
Sbjct: 218 IFK--IATQPTNPVLP-PHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 6e-24
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 36/288 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + K+E+ I +
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--------QQPKKELIINEI 68
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
L E N+V + +++ + +++ ME GG L D + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD------------------VVTE 110
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I
Sbjct: 111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQIT 167
Query: 269 PGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
P + K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ N + P +S +DF+ + L D R +A + L H +++
Sbjct: 228 IATNGTPELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 1e-23
Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 41/293 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV--EDVKREVKILQALAG 155
+ I + +G G +G Y T+K +G AVK ++ PI+ E+++ E ILQ+L
Sbjct: 24 WEIIETIGKGTYGKVYKVTNKKDGSLAAVKILD------PISDVDEEIEAEYNILQSLPN 77
Query: 156 HENVVKFYNAF-EDDNYV----YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H NVVKFY F + D V ++ +ELC GG + + + + R
Sbjct: 78 HPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKG-------------LLICGQR 124
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
E + ++ L H + ++HRD+K N L + + +K DFG+S +
Sbjct: 125 LDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT---EGGVKLVDFGVSAQLTST 181
Query: 271 KKFQDI-VGSAYYVAPEVLKRKSGPES------DVWSIGVITYILLCGRRPFWDKTEDGI 323
+ ++ VG+ +++APEV+ + + DVWS+G+ L G P +D
Sbjct: 182 RLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT 241
Query: 324 FKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
++ RN P P W S F+ + L+KD AR + L HP+++
Sbjct: 242 LFKIPRNPPPTLLHPEKW---CRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 1e-23
Identities = 67/243 (27%), Positives = 93/243 (38%), Gaps = 57/243 (23%)
Query: 99 TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
+GK LG G FG T + +VAVK +++ E+ E I++ L
Sbjct: 2 ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGAS--EEEREEFLEEASIMKKL- 58
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N+V+ +YI E GG+LLD + LT L
Sbjct: 59 SHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKH--GEKLTLKDLL----------- 105
Query: 215 DAAVVVRQMLRVAAE--CHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
QM A+ +L VHRD+ N L E+ +K +DFGLS
Sbjct: 106 -------QMALQIAKGMEYLESKNFVHRDLAARNCLV---TENLVVKISDFGLSR----- 150
Query: 271 KKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFW 316
DI YY APE LK K +SDVWS GV+ + I G +P+
Sbjct: 151 ----DIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYP 206
Query: 317 DKT 319
+
Sbjct: 207 GMS 209
|
Length = 258 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 87/305 (28%), Positives = 130/305 (42%), Gaps = 56/305 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIE---KNKMILPIAVEDVKREVKILQALAGHENVV 160
+G G +G Y A DK G VA+KK + I P A+ RE+ +LQ L+ +V
Sbjct: 9 IGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTAL----REISLLQMLSESIYIV 64
Query: 161 KFYNA--FEDDN---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
+ + E+ N +Y+ E LD L K + + R R
Sbjct: 65 RLLDVEHVEEKNGKPSLYLVFEY------LDSDLKKFMDSNG--------RGPGRPLPAK 110
Query: 216 AA-VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKF 273
+ Q+L+ A CH HG++HRD+KP+N L K LK D GL F P K +
Sbjct: 111 TIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKG--LLKIADLGLGRAFSIPVKSY 168
Query: 274 QDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV 327
+ + +Y APEVL D+WS+G I + + F +E IFK +
Sbjct: 169 THEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLL 228
Query: 328 -------------LRN-------KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 367
LR+ KP + P +S D ++K+L DP R++A A
Sbjct: 229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAA 288
Query: 368 LSHPW 372
L+HP+
Sbjct: 289 LTHPY 293
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 100 bits (249), Expect = 2e-23
Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 35/279 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG Y A +K G A K I+ +ED E+ IL A H N+VK
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDIL-ASCDHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+AF +N ++I +E C GG + D ++ ++ + TE VV +Q
Sbjct: 69 DAFYYENNLWILIEFCAGGAV-DAVMLEL---------------ERPLTEPQIRVVCKQT 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 282
L H + ++HRD+K N LF D +K DFG+S + ++ +G+ Y+
Sbjct: 113 LEALNYLHENKIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRTIQRRDSFIGTPYW 169
Query: 283 VAPEVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
+APEV+ K P ++DVWS+G+ + P + + ++ +++P
Sbjct: 170 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLA 229
Query: 337 KP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+P W S+ KDF+KK L K+ AR T Q L HP+V
Sbjct: 230 QPSRW---SSEFKDFLKKCLEKNVDARWTTTQLLQHPFV 265
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 89/290 (30%), Positives = 136/290 (46%), Gaps = 48/290 (16%)
Query: 102 KLLGHGQFGYTYVA--TDKANGDRVAVKKIEKNKMILPIAVED--VKREVKILQALAGHE 157
K+LG G +G + A+ ++ K+ K I+ + K E IL+A+ H
Sbjct: 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HP 60
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V AF+ +Y+ +E GGEL F+ + ++ + E A
Sbjct: 61 FIVDLIYAFQTGGKLYLILEYLSGGEL-----------------FMHLEREGIFMEDTAC 103
Query: 218 VVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQ 274
+ ++ +A E HLH G+++RD+KPEN L + +K TDFGL + I G
Sbjct: 104 FYLSEIS-LALE-HLHQQGIIYRDLKPENILLDA---QGHVKLTDFGLCKESIHEGTVTH 158
Query: 275 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW----DKTEDGIFKEVLR 329
G+ Y+APE+L R G D WS+G + Y +L G PF KT D I K L
Sbjct: 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL- 217
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 374
N P P ++ A+D +KKLL ++P +RL AA+ SHP+ R
Sbjct: 218 NLP-------PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFR 260
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 99.7 bits (248), Expect = 3e-23
Identities = 74/286 (25%), Positives = 130/286 (45%), Gaps = 39/286 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+++G+G +G Y G A+K ++ + E++K E+ +L+ + H N+
Sbjct: 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTEDEEEEIKLEINMLKKYSHHRNIAT 77
Query: 162 FYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
+Y AF D+ +++ ME C G + D ++ L W
Sbjct: 78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTD-LVKNTKGNALKEDWI------------- 123
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQ 274
A + R++LR A H H ++HRD+K +N L E++ +K DFG+S + +
Sbjct: 124 -AYICREILRGLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRN 179
Query: 275 DIVGSAYYVAPEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+G+ Y++APEV+ P+ SD+WS+G+ + G P D +
Sbjct: 180 TFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIP 239
Query: 329 RN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
RN P + K W S DF++ LVK+ +R + Q L HP++
Sbjct: 240 RNPPPKLKSKKW---SKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 4e-23
Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 30/231 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDR-VAVKKIE-------KNKMILPIAVEDVKREVKI 149
Y + + LG G FG Y K NG +A+K+I K+K ++ D+ EV I
Sbjct: 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTI 61
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
++ H N+V++Y F +++ +YI M+L EG L + +L K
Sbjct: 62 IKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHF------NSLK-------EKKQ 108
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
R+TE+ + QM V A +LH +VHRD+ P N + ED + TDFGL+
Sbjct: 109 RFTEERIWNIFVQM--VLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITDFGLAKQ 163
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 316
+P K +VG+ Y PE++K + G ++DVW+ G I Y + + PF+
Sbjct: 164 KQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFY 214
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 98.8 bits (246), Expect = 5e-23
Identities = 75/298 (25%), Positives = 127/298 (42%), Gaps = 52/298 (17%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALA 154
+ G+ LG G F Y A D G +AVK++ VE +++E++++ L
Sbjct: 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL- 60
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H ++++ A +D++ + +E GG +S L S+Y
Sbjct: 61 NHPHIIRMLGATCEDSHFNLFVEWMAGGS---------VSHLL-----------SKYGAF 100
Query: 215 DAAVVVR---QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG----LSDFI 267
AV++ Q+LR + H + ++HRD+K N L S + L+ DFG L+
Sbjct: 101 KEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQR--LRIADFGAAARLAAKG 158
Query: 268 KPGKKFQ-DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG--- 322
+FQ ++G+ ++APEVL+ + G DVWS+G + + + P W+ +
Sbjct: 159 TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPP-WNAEKHSNHL 217
Query: 323 --IFKEVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
IFK PSI S +D + L P R + + L HP R
Sbjct: 218 ALIFKIASATTA-------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 6e-23
Identities = 93/341 (27%), Positives = 140/341 (41%), Gaps = 87/341 (25%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVK--ILQA 152
+RY K +G G G A D G VA+KK+ + P V KR + +L
Sbjct: 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSR-----PFQNVTHAKRAYRELVLMK 70
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
L H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 71 LVNHKNIIGLLNVFTPQKSLEEFQDVYLVMEL------MDANLCQVIQMDLD-------- 116
Query: 207 KDSRYTEKDAAVVVRQMLRVAAEC---HLH--GLVHRDMKPENFLFKSAKEDSSLKATDF 261
+ + ++ QML C HLH G++HRD+KP N + KS D +LK DF
Sbjct: 117 ------HERMSYLLYQML-----CGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDF 162
Query: 262 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF----- 315
GL+ V + YY APEV+ E+ D+WS+G I ++ G F
Sbjct: 163 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH 222
Query: 316 ---WDK------TEDGIFKEVL--------RNKPDFRRKPWPSI---------------- 342
W+K T F L N+P + + +
Sbjct: 223 IDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKL 282
Query: 343 -SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
++ A+D + K+LV DP R++ AL HP++ D SE+
Sbjct: 283 KASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSEV 323
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 99.1 bits (247), Expect = 7e-23
Identities = 85/277 (30%), Positives = 132/277 (47%), Gaps = 47/277 (16%)
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMILPIAVED---VKREVKILQALAG 155
K+LG G FG ++ T G A+K ++K + V D K E IL A
Sbjct: 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL----KVRDRVRTKMERDIL-AEVN 56
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H +VK + AF+ + +Y+ ++ GG+L R + K+ +TE+D
Sbjct: 57 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTR-----------------LSKEVMFTEED 99
Query: 216 AAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK 272
+ + L +A + HLH G+++RD+KPEN L E+ +K TDFGLS + I KK
Sbjct: 100 VKFYLAE-LALALD-HLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKK 154
Query: 273 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
G+ Y+APEV+ R+ +S D WS GV+ + +L G PF K +L+ K
Sbjct: 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK 214
Query: 332 ---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
P F +S A+ ++ L ++P RL A
Sbjct: 215 LGMPQF-------LSPEAQSLLRALFKRNPANRLGAG 244
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 97.6 bits (244), Expect = 8e-23
Identities = 63/250 (25%), Positives = 104/250 (41%), Gaps = 54/250 (21%)
Query: 102 KLLGHGQFG--YTYVATDKANGDR-VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
K LG G FG Y K VAVK ++++ +D +E ++++ L GH N
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKL-GHPN 57
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
VV+ ++ +Y+ +E EGG+LLD +L + + + + +
Sbjct: 58 VVRLLGVCTEEEPLYLVLEYMEGGDLLD---------------YLRKSRPVFPSPEKSTL 102
Query: 219 VVRQMLRVAAEC-----HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
++ +L A + +L VHRD+ N L ED +K +DFGLS +
Sbjct: 103 SLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSRDVYDDD 159
Query: 272 KFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWD 317
YY APE LK +SDVWS GV+ + I G P+
Sbjct: 160 ---------YYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG 210
Query: 318 KTEDGIFKEV 327
+ + + + +
Sbjct: 211 LSNEEVLEYL 220
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 98.5 bits (245), Expect = 1e-22
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 27/277 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG G FG ++A K A+K ++K+ +++ VE E ++L H +
Sbjct: 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y F+ ++ ME GG+L+ I+ ++ A
Sbjct: 61 LYCTFQTKENLFFVMEYLNGGDLM-----------------FHIQSCHKFDLPRATFYAA 103
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 280
+++ H G+V+RD+K +N L + D +K DFG+ + + K G+
Sbjct: 104 EIICGLQFLHSKGIVYRDLKLDNILLDT---DGHIKIADFGMCKENMLGDAKTCTFCGTP 160
Query: 281 YYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APE+L +K D WS GV+ Y +L G+ PF E+ +F+ + + P + R W
Sbjct: 161 DYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPR--W 218
Query: 340 PSISNSAKDFVKKLLVKDPRARL-TAAQALSHPWVRE 375
++ AKD + KL V++P RL HP+ RE
Sbjct: 219 --LTREAKDILVKLFVREPERRLGVKGDIRQHPFFRE 253
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 97.6 bits (243), Expect = 2e-22
Identities = 80/302 (26%), Positives = 126/302 (41%), Gaps = 59/302 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI----EKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G + Y ++ G+ VA+K+I E+ I RE+ +++ L HEN+
Sbjct: 8 LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAI------REISLMKELK-HENI 60
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMIST-TLTSAWFLAIRKDSRYTEKDAAV 218
V+ ++ +N + + E + L K + T + A K Y
Sbjct: 61 VRLHDVIHTENKLMLVFEYMDKD------LKKYMDTHGVRGALDPNTVKSFTY------- 107
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 277
Q+L+ A CH + ++HRD+KP+N L LK DFGL+ F P F + V
Sbjct: 108 ---QLLKGIAFCHENRVLHRDLKPQNLLINK---RGELKLADFGLARAFGIPVNTFSNEV 161
Query: 278 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR------ 329
+ +Y AP+VL R D+WS+G I ++ GR F + ++ R
Sbjct: 162 VTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPT 221
Query: 330 ------------NKPDFRRKP-------WPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
KP F R P +P D + +LL +P R++A AL H
Sbjct: 222 ESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281
Query: 371 PW 372
PW
Sbjct: 282 PW 283
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 97.1 bits (241), Expect = 2e-22
Identities = 86/290 (29%), Positives = 141/290 (48%), Gaps = 47/290 (16%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR------EVKILQALA 154
GKLLG G FG Y+ D G +A K+++ + P + E K E+++L+ L
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFD----PESPETSKEVSALECEIQLLKNLQ 62
Query: 155 GHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
HE +V++Y D + + I ME GG + D++ A T + +YT
Sbjct: 63 -HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVT---------RKYT 112
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK---- 268
RQ+L + H + +VHRD+K N L SA ++K DFG S ++
Sbjct: 113 --------RQILEGMSYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRLQTICM 161
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE--DGIFK 325
G + + G+ Y+++PEV+ + G ++DVWS+G T + + +P W + E IFK
Sbjct: 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGC-TVVEMLTEKPPWAEYEAMAAIFK 220
Query: 326 EVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ +P PS IS A+DF+ + V + R R +A + L HP+ +
Sbjct: 221 --IATQPT--NPQLPSHISEHARDFLGCIFV-EARHRPSAEELLRHPFAQ 265
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 97.1 bits (242), Expect = 2e-22
Identities = 77/304 (25%), Positives = 139/304 (45%), Gaps = 63/304 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALAGHENVV 160
+G G +G + A ++ + VA+K++ + ++ + A+ RE+ +L+ L H+N+V
Sbjct: 8 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL----REICLLKELK-HKNIV 62
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV- 219
+ Y+ D + + E C D+ L K DS + D +V
Sbjct: 63 RLYDVLHSDKKLTLVFEYC------DQDLKKYF--------------DSCNGDIDPEIVK 102
Query: 220 --VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 276
+ Q+L+ A CH H ++HRD+KP+N L ++ LK DFGL+ F P + +
Sbjct: 103 SFMFQLLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVRCYSAE 159
Query: 277 VGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTE-----DGIFKEV-- 327
V + +Y P+VL + D+WS G I L RP + + IF+ +
Sbjct: 160 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 219
Query: 328 --------LRNKPDFRRKP-------W----PSISNSAKDFVKKLLVKDPRARLTAAQAL 368
+ PD++ P P ++++ +D ++ LLV +P R++A +AL
Sbjct: 220 PTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEAL 279
Query: 369 SHPW 372
HP+
Sbjct: 280 QHPY 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 96.6 bits (240), Expect = 2e-22
Identities = 84/287 (29%), Positives = 145/287 (50%), Gaps = 37/287 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAG 155
+ +GKLLG G FG Y+ D G +AVK++ + + V ++ E+++L+ L
Sbjct: 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR- 62
Query: 156 HENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H+ +V++Y D + + I +E GG + D++ A T + RYT
Sbjct: 63 HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVT---------RRYT- 112
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK----P 269
RQ+L+ + H + +VHRD+K N L SA ++K DFG S I+
Sbjct: 113 -------RQILQGVSYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRIQTICMS 162
Query: 270 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKE 326
G + + G+ Y+++PEV+ + G ++DVWS+ T + + +P W + E IFK
Sbjct: 163 GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVAC-TVVEMLTEKPPWAEYEAMAAIFK- 220
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ +P P +S++ +DF+K++ V++ R R TA L HP+V
Sbjct: 221 -IATQPTKPMLP-DGVSDACRDFLKQIFVEEKR-RPTAEFLLRHPFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 97.6 bits (243), Expect = 3e-22
Identities = 80/277 (28%), Positives = 128/277 (46%), Gaps = 27/277 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG G FG +A K + A+K ++K+ ++ VE E ++L H +
Sbjct: 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTH 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ F+ +++ ME GG+L+ I+ R+ E A
Sbjct: 61 LFCTFQTKEHLFFVMEYLNGGDLM-----------------FHIQSSGRFDEARARFYAA 103
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKPGKKFQDIVGSA 280
+++ H G+++RD+K +N L +D +K DFG+ + K G+
Sbjct: 104 EIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFCGTP 160
Query: 281 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APE+LK + ES D WS GV+ Y +L G+ PF + ED +F +L ++P F R W
Sbjct: 161 DYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPR--W 218
Query: 340 PSISNSAKDFVKKLLVKDPRARL-TAAQALSHPWVRE 375
IS AKD + KL +DP RL HP+ R
Sbjct: 219 --ISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 98.3 bits (245), Expect = 3e-22
Identities = 80/321 (24%), Positives = 125/321 (38%), Gaps = 70/321 (21%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K +G G FG + A+K + K +++ VK E IL A A +E VVK
Sbjct: 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDIL-AEADNEWVVK 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y +F+D + +Y M+ GG+++ ++ I + E A +
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGI-----------------FEEDLARFYIA 108
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL---------SDFIKPGKK 272
++ H G +HRD+KP+N L D +K TDFGL S + + G
Sbjct: 109 ELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQKGDH 165
Query: 273 F-QD----------------------------------IVGSAYYVAPEVLKRKSGPES- 296
QD +VG+ Y+APEVL R +
Sbjct: 166 HRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLC 225
Query: 297 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 356
D WS+GVI Y +L G+ PF T +V+ + +S A D + + L
Sbjct: 226 DWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILR-LCC 284
Query: 357 DPRARL---TAAQALSHPWVR 374
RL A + +HP+ +
Sbjct: 285 GAEDRLGKNGADEIKAHPFFK 305
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 97.1 bits (242), Expect = 4e-22
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 57/305 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G +G Y A D +G+ VA+KK+ + + +PI+ RE+ +L L H N+V+
Sbjct: 15 IGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPIS---SLREITLLLNLR-HPNIVE 70
Query: 162 FYNAFEDD--NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
+ +++ ME CE + L +L M + ++E +
Sbjct: 71 LKEVVVGKHLDSIFLVMEYCE--QDLASLLDNMPTP---------------FSESQVKCL 113
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 278
+ Q+LR H + ++HRD+K N L LK DFGL+ + P K V
Sbjct: 114 MLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGC---LKIADFGLARTYGLPAKPMTPKVV 170
Query: 279 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE---------------D 321
+ +Y APE+L D+W++G I LL + K+E +
Sbjct: 171 TLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNE 230
Query: 322 GIF----------KEVLRNKP-DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
I+ K L +P + + +P +S + + LL+ DP+ R TA +AL
Sbjct: 231 SIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290
Query: 371 PWVRE 375
+ +E
Sbjct: 291 SYFKE 295
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 96.3 bits (239), Expect = 7e-22
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 34/290 (11%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
+ +D ++ +T + +GHG FG Y A D + VA+KK+ + +D+ +EVK
Sbjct: 19 FKEDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKF 78
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
LQ + H N +++ + ++ ++ ME C G +++ L + K
Sbjct: 79 LQRIK-HPNSIEYKGCYLREHTAWLVMEYCLG----------------SASDLLEVHKKP 121
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
E + A + L+ A H H ++HRD+K N L E +K DFG + P
Sbjct: 122 -LQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASP 177
Query: 270 GKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGI 323
F VG+ Y++APEV+ + + + DVWS+G IT I L R+P F +
Sbjct: 178 ANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSAL 233
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ P + W S+ ++FV L K P+ R T+ + L H +V
Sbjct: 234 YHIAQNESPTLQSNEW---SDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 1e-21
Identities = 75/282 (26%), Positives = 123/282 (43%), Gaps = 31/282 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + K LG G +G Y ++ A+K+++ M ED E++IL A H
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQK-EREDAVNEIRIL-ASVNH 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL-AKMISTTLTSA--WFLAIRKDSRYTE 213
N++ + AF D N + I ME G+L I K + W + I
Sbjct: 59 PNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFI-------- 110
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
Q+LR H ++HRD+K N + A + +K D G+S +K
Sbjct: 111 --------QLLRGLQALHEQKILHRDLKSAN-ILLVANDL--VKIGDLGISKVLKKNMAK 159
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
I G+ +Y+APEV K + +SD+WS+G + Y + PF ++ + +V R K
Sbjct: 160 TQI-GTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY 218
Query: 333 DFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P P I S ++F++ +L P+ R + L+ P V
Sbjct: 219 P----PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 95.5 bits (237), Expect = 1e-21
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 34/290 (11%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
+ + D ++ ++ + +GHG FG Y A D N + VA+KK+ + +D+ +E
Sbjct: 6 ELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 65
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
V+ LQ L H N +++ + ++ ++ ME C G +++ L +
Sbjct: 66 VRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLG----------------SASDLLEVH 108
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
K E + A V L+ A H H ++HRD+K N L E +K DFG +
Sbjct: 109 KKP-LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASI 164
Query: 267 IKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTE 320
+ P F VG+ Y++APEV+ + + + DVWS+G IT I L R+P F
Sbjct: 165 MAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAM 220
Query: 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
++ P + W S ++FV L K P+ R T+ L H
Sbjct: 221 SALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKH 267
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 95.5 bits (238), Expect = 2e-21
Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 31/268 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL--AGHENVVK 161
LG G FG +A K G+ A+K ++K +I VE + E +I + H +V
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN 66
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ F+ +++V ME GG+L+ I + S A F A A VV+
Sbjct: 67 LFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEP--RAVFYA-----------ACVVLG 113
Query: 222 -QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGS 279
Q L H + +V+RD+K +N L + + +K DFGL + + G + G+
Sbjct: 114 LQYL------HENKIVYRDLKLDNLLLDT---EGFVKIADFGLCKEGMGFGDRTSTFCGT 164
Query: 280 AYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338
++APEVL S + D W +GV+ Y +L G PF E+ +F ++ ++ + R
Sbjct: 165 PEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR-- 222
Query: 339 WPSISNSAKDFVKKLLVKDPRARLTAAQ 366
+S A +++LL ++P RL + +
Sbjct: 223 --FLSREAISIMRRLLRRNPERRLGSGE 248
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 94.7 bits (235), Expect = 2e-21
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 45/278 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIA--VEDVKREVKILQALAGHE 157
K+LG G +G ++ + D ++ K+ K I+ A E + E ++L+ +
Sbjct: 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 65
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V + AF+ D +++ ++ GGEL F + + R+ E++
Sbjct: 66 FLVTLHYAFQTDTKLHLILDYINGGEL-----------------FTHLSQRERFKEQEVQ 108
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPG-KKFQD 275
+ +++ H G+++RD+K EN L S + + TDFGLS +F + ++
Sbjct: 109 IYSGEIVLALEHLHKLGIIYRDIKLENILLDS---NGHVVLTDFGLSKEFHEDEVERAYS 165
Query: 276 IVGSAYYVAPEVLKRKSGPES---DVWSIGVITYILLCGRRPFWDKTEDG-------IFK 325
G+ Y+AP++++ G D WS+GV+ Y LL G PF T DG I +
Sbjct: 166 FCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPF---TVDGEKNSQAEISR 222
Query: 326 EVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 362
+L+++P P+P +S AKD +++LL+KDP+ RL
Sbjct: 223 RILKSEP-----PYPQEMSALAKDIIQRLLMKDPKKRL 255
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 94.1 bits (234), Expect = 2e-21
Identities = 81/302 (26%), Positives = 135/302 (44%), Gaps = 48/302 (15%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK 144
++ YD++ +R +LG G +G Y A D + R+A+K+I + V+ +
Sbjct: 2 EYEYEYDENGER-----VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS---RYVQPLH 53
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E+ + L H N+V++ + ++ + I ME GG L S L S W
Sbjct: 54 EEIALHSYLK-HRNIVQYLGSDSENGFFKIFMEQVPGGSL---------SALLRSKW--G 101
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
KD+ E+ +Q+L H + +VHRD+K +N L + +K +DFG S
Sbjct: 102 PLKDN---EQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYS--GVVKISDFGTS 156
Query: 265 DF---IKPGKKFQDIVGSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDK 318
I P + G+ Y+APEV+ R G +D+WS+G + G+ PF +
Sbjct: 157 KRLAGINPCT--ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIEL 214
Query: 319 TED-------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
E G+FK + P+ S+S AK+F+ + DP R +A L P
Sbjct: 215 GEPQAAMFKVGMFK-IHPEIPE-------SLSAEAKNFILRCFEPDPDKRASAHDLLQDP 266
Query: 372 WV 373
++
Sbjct: 267 FL 268
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 95.1 bits (237), Expect = 2e-21
Identities = 95/332 (28%), Positives = 140/332 (42%), Gaps = 67/332 (20%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RY + +G G +G A D +G +VA+KKI + +A + RE+KIL+
Sbjct: 2 DVGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTL-RELKILRH 60
Query: 153 LAGHENVVKFYNAF----EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
H+N++ + D VY+ M+L E L I I D
Sbjct: 61 FK-HDNIIAIRDILRPPGADFKDVYVVMDLMESD--LHHI----------------IHSD 101
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG----LS 264
TE+ + Q+LR H ++HRD+KP N L ED L+ DFG LS
Sbjct: 102 QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGLS 158
Query: 265 DFIKPGKKFQ-DIVGSAYYVAPEVLKRKSGPES----DVWSIGVITYILLCGRRP-FWDK 318
K F + V + +Y APE+L S PE D+WS+G I +L GRR F K
Sbjct: 159 SSPTEHKYFMTEYVATRWYRAPELL--LSLPEYTTAIDMWSVGCIFAEML-GRRQLFPGK 215
Query: 319 T---------------EDGIFKEV--------LRNKPDFRRKPW----PSISNSAKDFVK 351
+ + + ++N P + PW P S A D +
Sbjct: 216 NYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLS 275
Query: 352 KLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
++L DP R+T QAL HP++ + D + P
Sbjct: 276 QMLQFDPEERITVEQALQHPFLAQYHDPDDEP 307
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 94.2 bits (234), Expect = 4e-21
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 26/263 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG G FG +A K G+ AVK ++K+ +++ VE E ++L + +
Sbjct: 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTH 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y F+ +++ ME GG+L+ I+ R+ A
Sbjct: 61 LYCTFQTKEHLFFVMEFLNGGDLM-----------------FHIQDKGRFDLYRATFYAA 103
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 280
+++ H G+++RD+K +N + D +K DFG+ + + + G+
Sbjct: 104 EIVCGLQFLHSKGIIYRDLKLDNVMLD---RDGHIKIADFGMCKENVFGDNRASTFCGTP 160
Query: 281 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APE+L+ K D WS GV+ Y +L G+ PF ED +F+ + + P + R W
Sbjct: 161 DYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPR--W 218
Query: 340 PSISNSAKDFVKKLLVKDPRARL 362
I+ +KD ++KL +DP RL
Sbjct: 219 --ITKESKDILEKLFERDPTRRL 239
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 94.2 bits (234), Expect = 4e-21
Identities = 76/291 (26%), Positives = 136/291 (46%), Gaps = 43/291 (14%)
Query: 102 KLLGHGQFGYTYV---ATDKANGDRVAVKKIEKNKMILPI-AVEDVKREVKILQALAGHE 157
K+LG G +G ++ T G A+K ++K ++ VE + E +L+ +
Sbjct: 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSP 65
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V + AF+ + +++ ++ GGE+ F + + ++E +
Sbjct: 66 FLVTLHYAFQTEAKLHLILDYVSGGEM-----------------FTHLYQRDNFSEDEVR 108
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK-KFQD 275
+++ H G+V+RD+K EN L S + + TDFGLS +F+ K +
Sbjct: 109 FYSGEIILALEHLHKLGIVYRDIKLENILLDS---EGHVVLTDFGLSKEFLSEEKERTYS 165
Query: 276 IVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFW----DKTEDGIFKEVLR 329
G+ Y+APE+++ K G D WS+G++ + LL G PF T+ + + +L+
Sbjct: 166 FCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK 225
Query: 330 NKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAA-----QALSHPWVR 374
P P+PS I A+D + KLL KDP+ RL A + HP+ +
Sbjct: 226 CDP-----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFK 271
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 92.6 bits (230), Expect = 5e-21
Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 43/288 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y K +G G FG + K +G + +K+I +KM P E+ ++EV +L + H
Sbjct: 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMK-H 58
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK---MISTTLTSAWFLAIRKDSRYTE 213
N+V++ +FE++ +YI M+ CEGG+L +I A+ + WF+
Sbjct: 59 PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFV---------- 108
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKK 272
Q+ H ++HRD+K +N FL K D ++K DFG++ + +
Sbjct: 109 --------QICLALKHVHDRKILHRDIKSQNIFLTK----DGTIKLGDFGIARVLNSTVE 156
Query: 273 F-QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE-VLR 329
+ +G+ YY++PE+ + R +SD+W++G + Y + + F E G K VL+
Sbjct: 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAF----EAGNMKNLVLK 212
Query: 330 NKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
R +P + S ++ V +L ++PR R + L ++
Sbjct: 213 ----IIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 93.2 bits (232), Expect = 5e-21
Identities = 83/313 (26%), Positives = 128/313 (40%), Gaps = 73/313 (23%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDV 143
Y D + +G +G G G Y K G +AVK++ E+NK IL
Sbjct: 10 YPADLNDLENLG-EIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRIL------- 61
Query: 144 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE----------GGELLDRILAKMI 193
++ ++ +VK Y F D+ V+I MEL G + + IL KM
Sbjct: 62 -MDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMT 120
Query: 194 STTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253
+ + +L EK HG++HRD+KP N L
Sbjct: 121 VAIVKALHYL--------KEK------------------HGVIHRDVKPSNILLD---AS 151
Query: 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPE----SDVWSIGVITYIL 308
++K DFG+S + K G A Y+APE + P+ +DVWS+G+ L
Sbjct: 152 GNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVEL 211
Query: 309 LCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSA------KDFVKKLLVKDPRAR 361
G+ P+ + KTE + ++L+ +P PS+ + FV L KD R R
Sbjct: 212 ATGQFPYKNCKTEFEVLTKILQEEP-------PSLPPNEGFSPDFCSFVDLCLTKDHRKR 264
Query: 362 LTAAQALSHPWVR 374
+ L HP++R
Sbjct: 265 PKYRELLQHPFIR 277
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 93.9 bits (233), Expect = 6e-21
Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 26/265 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG +A KA AVK ++K ++ + + E +L H +V
Sbjct: 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ +F+ + +Y ++ GGEL F ++++ + E A
Sbjct: 61 LHFSFQTADKLYFVLDYINGGEL-----------------FYHLQRERCFLEPRARFYAA 103
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 280
++ H +V+RD+KPEN L S + TDFGL + I+ G+
Sbjct: 104 EIASALGYLHSLNIVYRDLKPENILLDS---QGHIVLTDFGLCKENIEHNGTTSTFCGTP 160
Query: 281 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL ++ + D W +G + Y +L G PF+ + ++ +L NKP + K
Sbjct: 161 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL-NKP-LQLK-- 216
Query: 340 PSISNSAKDFVKKLLVKDPRARLTA 364
P+I+NSA+ ++ LL KD RL A
Sbjct: 217 PNITNSARHLLEGLLQKDRTKRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 93.9 bits (233), Expect = 9e-21
Identities = 80/279 (28%), Positives = 125/279 (44%), Gaps = 44/279 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR-------EVKIL 150
Y + K++G G FG + K+ A+K + K +MI KR E + +
Sbjct: 45 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI--------KRSDSAFFWEERDI 96
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
A A VV+ + AF+DD Y+Y+ ME GG+L++ M + + W +R
Sbjct: 97 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL----MSNYDVPEKW-------AR 145
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
+ + + + + H G +HRD+KP+N L + LK DFG K
Sbjct: 146 FYTAEVVLALDAI-------HSMGFIHRDVKPDNMLLDKS---GHLKLADFGTCMKMNKE 195
Query: 270 GKKFQDI-VGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGI 323
G D VG+ Y++PEVLK + G E D WS+GV Y +L G PF+ + G
Sbjct: 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT 255
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 362
+ +++ +K IS AK+ + L D RL
Sbjct: 256 YSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRL 293
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 2e-20
Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 58/303 (19%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALAGHENV 159
L+G G +G K G VA+KK E +KM+ IA+ RE+++L+ L HEN+
Sbjct: 8 LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAM----REIRMLKQLR-HENL 62
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
V F +Y+ E +D + + +RK
Sbjct: 63 VNLIEVFRRKKRLYLVFEF------VDHTVLDDLEKYPNGLDESRVRK-----------Y 105
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVG 278
+ Q+LR CH H ++HRD+KPEN L + +K DFG + + PG+ + D V
Sbjct: 106 LFQILRGIEFCHSHNIIHRDIKPENILVSQSG---VVKLCDFGFARTLAAPGEVYTDYVA 162
Query: 279 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVL------- 328
+ +Y APE+L K G D+W++G + +L G F D D ++ +
Sbjct: 163 TRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIP 222
Query: 329 RNKPDFRRKP-------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
R++ F++ P +P +S D K+ L DP R +++Q L
Sbjct: 223 RHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282
Query: 370 HPW 372
H +
Sbjct: 283 HEF 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 92.7 bits (230), Expect = 2e-20
Identities = 90/326 (27%), Positives = 134/326 (41%), Gaps = 68/326 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
RYT K +G G +G A DK G++VA+KK+ + I + RE+ +L+ +
Sbjct: 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSR-PFQSEIFAKRAYRELTLLKHMQ- 72
Query: 156 HENVVKF---------YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
HENV+ + F+D Y+ M + L +I+ +S
Sbjct: 73 HENVIGLLDVFTSAVSGDEFQD---FYLVMPYMQTD--LQKIMGHPLS------------ 115
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
E +V QML H G++HRD+KP N + ED LK DFGL+
Sbjct: 116 ------EDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNL---AVNEDCELKILDFGLAR- 165
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR----------- 313
+ V + +Y APEV+ D+WS+G I +L G+
Sbjct: 166 -HADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL 224
Query: 314 ------------PFWDKTEDGIFKEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKD 357
F K ED K +++ P + RK +P S A D ++K+L D
Sbjct: 225 TQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELD 284
Query: 358 PRARLTAAQALSHPWVREGGDASEIP 383
RLTA +AL HP+ DA E
Sbjct: 285 VDKRLTATEALEHPYFDSFRDADEET 310
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 90.9 bits (226), Expect = 3e-20
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 58/302 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILP-IAVEDVKREVKILQALAGHENVV 160
+G G +G Y +K G VA+KKI E + +P A+ RE+ +L+ L H N+V
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAI----REISLLKELQ-HPNIV 62
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVV 220
+ ++ +Y+ E L L K + + + K + +
Sbjct: 63 CLQDVLMQESRLYLIFEF------LSMDLKKYLDS---------LPKGQYMDAELVKSYL 107
Query: 221 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 279
Q+L+ CH ++HRD+KP+N L + +K DFGL+ F P + + V +
Sbjct: 108 YQILQGILFCHSRRVLHRDLKPQNLLIDN---KGVIKLADFGLARAFGIPVRVYTHEVVT 164
Query: 280 AYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 325
+Y APEVL R S P D+WSIG I + + ++P + D D +F+
Sbjct: 165 LWYRAPEVLLGSPRYSTP-VDIWSIGTI-FAEMATKKPLFHGDSEIDQLFRIFRILGTPT 222
Query: 326 -------EVLRN--------KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
L + K R ++ D ++K+L+ DP R++A +AL+H
Sbjct: 223 EDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282
Query: 371 PW 372
P+
Sbjct: 283 PY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 90.4 bits (224), Expect = 3e-20
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 57/297 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK--------REVK 148
RY + + LG G FG Y+ DK E+ K++ I V ++ +E +
Sbjct: 1 RYILQQRLGKGSFGTVYLVKDKK------AVAEERLKVLKEIPVGELNPNETVQANQEAQ 54
Query: 149 ILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRI-----LAKMISTTLTSAWF 202
+L L H +VKF+ +F E D + I E CEG +L ++ K +S WF
Sbjct: 55 LLSKLD-HPAIVKFHASFLERDAFCIIT-EYCEGRDLDCKLEELKHTGKTLSENQVCEWF 112
Query: 203 LAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 262
+ Q+L H ++HRD+K +N K ++ LK DFG
Sbjct: 113 I------------------QLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFG 150
Query: 263 LSDFIKPGKKF-QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE 320
+S + G+ YY++PE LK + +SD+WS+G I Y + C F +
Sbjct: 151 VSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF 210
Query: 321 DGIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ ++ P PS+ S ++ +L KDP R +AA+ L +P++
Sbjct: 211 LSVVLRIVEG-------PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 91.6 bits (227), Expect = 3e-20
Identities = 75/274 (27%), Positives = 127/274 (46%), Gaps = 35/274 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K++G G FG V K + +R+ KI +L A RE + + +
Sbjct: 3 FEIIKVIGRGAFGEVAVVKMK-HTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQ 61
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ + AF+D+NY+Y+ M+ GG+LL TL S + + R E A
Sbjct: 62 WITTLHYAFQDENYLYLVMDYYVGGDLL----------TLLSKF------EDRLPEDMAR 105
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-- 275
+ +M+ H VHRD+KP+N L + ++ DFG + Q
Sbjct: 106 FYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM---NGHIRLADFGSCLKMNQDGTVQSSV 162
Query: 276 IVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
VG+ Y++PE+L+ K GPE D WS+GV Y +L G PF+ ++ + +++
Sbjct: 163 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222
Query: 330 NKPDFRRKPWPS----ISNSAKDFVKKLLVKDPR 359
++ F+ +PS +S AKD +++L+ R
Sbjct: 223 HEERFQ---FPSHITDVSEEAKDLIQRLICSRER 253
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 91.8 bits (228), Expect = 3e-20
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 37/292 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DF+ I K++G G FG V K G A+K + K +M L A RE + +
Sbjct: 2 DFE----ILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM-LKRAETACFREERDVLV 56
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+ + AF+D+N +Y+ M+ GG+LL TL S + + R
Sbjct: 57 NGDRRWITNLHYAFQDENNLYLVMDYYVGGDLL----------TLLS------KFEDRLP 100
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E A + +M+ H G VHRD+KP+N L ++ ++ DFG +
Sbjct: 101 EDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD---KNGHIRLADFGSCLRLLADGT 157
Query: 273 FQD--IVGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324
Q VG+ Y++PE+L K + GPE D WS+GV Y +L G PF+ ++ +
Sbjct: 158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 217
Query: 325 KEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDPRARL---TAAQALSHPW 372
+++ +K F+ P +S AKD +++L+ P RL HP+
Sbjct: 218 GKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICS-PETRLGRNGLQDFKDHPF 268
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 91.0 bits (226), Expect = 4e-20
Identities = 80/317 (25%), Positives = 130/317 (41%), Gaps = 64/317 (20%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQALA 154
+ I +G G +G Y A DK G+ VA+KK+ + K PI A+ RE+KIL+ L
Sbjct: 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAI----REIKILRQLN 64
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGG-------ELLDRILAKMISTTLTSAWFLAIRK 207
H N+V D A++ + E +D L ++ + L
Sbjct: 65 -HRNIVNLKEIVTDKQD---ALDFKKDKGAFYLVFEYMDHDLMGLLESGLVH-------- 112
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
++E ++Q+L CH +HRD+K N L + + +K DFGL+
Sbjct: 113 ---FSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ---IKLADFGLARLY 166
Query: 268 KPGKK--FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-------- 315
+ + + V + +Y PE+L + + GP DVWS G I L ++P
Sbjct: 167 NSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFT-KKPIFQANQELA 225
Query: 316 ----------------WDKTEDGIFKEVLRNKPDFRRK---PWPSISNSAKDFVKKLLVK 356
W + ++ K +RR+ + I A D + +L
Sbjct: 226 QLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTL 285
Query: 357 DPRARLTAAQALSHPWV 373
DP R TA +AL+ PW+
Sbjct: 286 DPSKRCTAEEALNSPWL 302
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 90.0 bits (223), Expect = 4e-20
Identities = 80/295 (27%), Positives = 127/295 (43%), Gaps = 50/295 (16%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE---KNKMILPIAVEDVKREVKILQALA 154
+T G++LG G +G Y G +AVK++E N + E ++ EV +L++L
Sbjct: 2 WTKGEVLGKGAYGTVYCGL-TNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK 60
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N+V++ DDN + I ME GG IS+ L L +YT
Sbjct: 61 -HVNIVQYLGTCLDDNTISIFMEFVPGGS---------ISSILNRFGPLPEPVFCKYT-- 108
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI------- 267
+Q+L A H + +VHRD+K N + + +K DFG + +
Sbjct: 109 ------KQILDGVAYLHNNCVVHRDIKGNNVMLMP---NGIIKLIDFGCARRLAWVGLHG 159
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ + G+ Y++APEV+ G +SD+WSIG + + G+ P
Sbjct: 160 THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPL---------AS 210
Query: 327 VLRNKPDF----RRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ R F R P + S +A DFV L +D R +A Q L H ++
Sbjct: 211 MDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 4e-20
Identities = 88/327 (26%), Positives = 137/327 (41%), Gaps = 73/327 (22%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RY + LG G G + A D RVAVKKI + P +V+ RE+KI++
Sbjct: 2 DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKI---VLTDPQSVKHALREIKIIRR 58
Query: 153 LAGHENVVKFYNAFEDDNY--------------VYIAMELCEGGELLDRILAKMISTTLT 198
L H+N+VK Y VYI E ++ LA ++
Sbjct: 59 LD-HDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQ------EYMETDLANVL----- 106
Query: 199 SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258
+ +E+ A + + Q+LR H ++HRD+KP N + ED LK
Sbjct: 107 --------EQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT--EDLVLKI 156
Query: 259 TDFGLSDFIKP-----GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCG 311
DFGL+ + P G + +V + +Y +P +L D+W+ G I +L G
Sbjct: 157 GDFGLARIVDPHYSHKGYLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 215
Query: 312 RRPFWDKTE--------DGI-------FKEVLRNKPDF-------RRKPW----PSISNS 345
+ F E + + E+L P F R+P P ++
Sbjct: 216 KPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPE 275
Query: 346 AKDFVKKLLVKDPRARLTAAQALSHPW 372
A DF++++L +P RLTA +AL HP+
Sbjct: 276 ALDFLEQILTFNPMDRLTAEEALMHPY 302
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 90.1 bits (223), Expect = 4e-20
Identities = 74/287 (25%), Positives = 130/287 (45%), Gaps = 37/287 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG Y D + VA+K I+ + +ED+++E+ +L
Sbjct: 1 DPEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQ 58
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+ ++Y ++ ++I ME GG LD + K
Sbjct: 59 -CDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLL------------------KPGPLE 99
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 271
E A ++R++L+ H +HRD+K N L E +K DFG++ + +
Sbjct: 100 ETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQI 156
Query: 272 KFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
K VG+ +++APEV+K+ + ++D+WS+G+ L G P D + + +N
Sbjct: 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN 216
Query: 331 KPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P P++ S K+FV+ L KDPR R TA + L H ++
Sbjct: 217 SP-------PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 90.9 bits (225), Expect = 5e-20
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 35/269 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K++G G FG V K N D+V KI +L A RE + + ++
Sbjct: 3 FEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQ 61
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ + AF+D+N +Y+ M+ GG+LL TL S + + R E A
Sbjct: 62 WITTLHYAFQDENNLYLVMDYYVGGDLL----------TLLSKF------EDRLPEDMAR 105
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-- 275
+ +M+ H VHRD+KP+N L + ++ DFG + Q
Sbjct: 106 FYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM---NGHIRLADFGSCLKLMEDGTVQSSV 162
Query: 276 IVGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
VG+ Y++PE+L K K GPE D WS+GV Y +L G PF+ ++ + +++
Sbjct: 163 AVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222
Query: 330 NKPDFRRKPWPS----ISNSAKDFVKKLL 354
+K F+ +P+ +S AKD +++L+
Sbjct: 223 HKERFQ---FPAQVTDVSEDAKDLIRRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 90.1 bits (224), Expect = 7e-20
Identities = 85/329 (25%), Positives = 121/329 (36%), Gaps = 78/329 (23%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI----EKNKMILPIAVEDVKREVKILQ 151
R Y I LG G FG Y A G VA+KKI EK+ PI RE+KIL+
Sbjct: 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGF--PITAL---REIKILK 62
Query: 152 ALAGHENVVKFYNAF--------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL 203
L H NVV + VY+ +D L+ ++
Sbjct: 63 KLK-HPNVVPLIDMAVERPDKSKRKRGSVYMVT------PYMDHDLSGLLEN-------- 107
Query: 204 AIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
+ TE + Q+L H + ++HRD+K N L + LK DFGL
Sbjct: 108 ---PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN---QGILKIADFGL 161
Query: 264 SDFI-----KPGK-------KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILL 309
+ P K+ ++V + +Y PE+L +R+ D+W IG + +
Sbjct: 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMF 221
Query: 310 CGRRPFWDKTE----DGIFK-------------EVLRNKPDFR-RKPWPSI--SNSAK-- 347
R K++ IFK L +P K
Sbjct: 222 TRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLG 281
Query: 348 ----DFVKKLLVKDPRARLTAAQALSHPW 372
D + KLL DP RLTA+ AL HP+
Sbjct: 282 PEGLDLLSKLLSLDPYKRLTASDALEHPY 310
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 90.2 bits (224), Expect = 8e-20
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 30/267 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG +A KA+G AVK ++K ++ + + E +L H +V
Sbjct: 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ +F+ + +Y ++ GGEL F ++++ + E A
Sbjct: 61 LHYSFQTADKLYFVLDYVNGGEL-----------------FFHLQRERSFPEPRARFYAA 103
Query: 222 QMLRVAAECHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVG 278
++ +A +LH L ++RD+KPEN L S + TDFGL + I+ K G
Sbjct: 104 EI--ASALGYLHSLNIIYRDLKPENILLDS---QGHVVLTDFGLCKEGIEHSKTTSTFCG 158
Query: 279 SAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 337
+ Y+APEVL+++ + D W +G + Y +L G PF+ + ++ +L NKP R K
Sbjct: 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL-NKP-LRLK 216
Query: 338 PWPSISNSAKDFVKKLLVKDPRARLTA 364
P +IS SA+ ++ LL KD RL A
Sbjct: 217 P--NISVSARHLLEGLLQKDRTKRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 90.6 bits (225), Expect = 8e-20
Identities = 88/330 (26%), Positives = 135/330 (40%), Gaps = 70/330 (21%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I +++G G +G A D G++VA+KKI + A + RE+K+L+ L H
Sbjct: 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATR-ILREIKLLRLLR-H 58
Query: 157 ENVVKFY--------NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
++V+ F+D +Y+ EL E S I+ +
Sbjct: 59 PDIVEIKHIMLPPSRREFKD---IYVVFELME------------------SDLHQVIKAN 97
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI- 267
T + + Q+LR H + HRD+KP+N L A D LK DFGL+
Sbjct: 98 DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAF 154
Query: 268 --KPGKKF-QDIVGSAYYVAPEV---LKRKSGPESDVWSIGVITYILLCGRRPFWDK--- 318
P F D V + +Y APE+ K P D+WSIG I +L G+ F K
Sbjct: 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV 214
Query: 319 ----------------TEDGI-------FKEVLRNKP--DFRRKPWPSISNSAKDFVKKL 353
T + + +R K F +K +P+ A +++L
Sbjct: 215 HQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQK-FPNADPLALRLLERL 273
Query: 354 LVKDPRARLTAAQALSHPWVREGGDASEIP 383
L DP+ R TA +AL+ P+ + P
Sbjct: 274 LAFDPKDRPTAEEALADPYFKGLAKVEREP 303
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 90.9 bits (225), Expect = 9e-20
Identities = 89/341 (26%), Positives = 143/341 (41%), Gaps = 70/341 (20%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG + K G A+K + K M+ V ++ E IL G VVK
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW-VVK 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ +F+D +Y+ ME GG+++ L ++KD+ E +
Sbjct: 66 MFYSFQDKRNLYLIMEFLPGGDMMT----------------LLMKKDTLSEEATQFYIAE 109
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--------- 272
+L + A H G +HRD+KP+N L + +K +DFGL +K +
Sbjct: 110 TVLAIDA-IHQLGFIHRDIKPDNLLLDAK---GHVKLSDFGLCTGLKKAHRTEFYRNLTH 165
Query: 273 -------FQDI--------------------VGSAYYVAPEVLKRKSGPE-SDVWSIGVI 304
FQ++ VG+ Y+APEV + + D WS+GVI
Sbjct: 166 NPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVI 225
Query: 305 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 364
Y +L G PF +T +++V+ K P IS AKD + + D R+ +
Sbjct: 226 MYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGS 284
Query: 365 A---QALSHPWVREGGD-------ASEIPIDISVLNNMRQF 395
+ SHP+ EG D + IPI+I +++ F
Sbjct: 285 NGVEEIKSHPFF-EGVDWGHIRERPAAIPIEIKSIDDTSNF 324
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 90.5 bits (224), Expect = 1e-19
Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 44/279 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR-------EVKIL 150
Y + K++G G FG + K++ A+K + K +MI KR E + +
Sbjct: 45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMI--------KRSDSAFFWEERDI 96
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
A A VV+ + AF+DD Y+Y+ ME GG+L++ + +
Sbjct: 97 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN------------------LMSNYD 138
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
EK A +++ H GL+HRD+KP+N L + LK DFG +
Sbjct: 139 VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDET 195
Query: 270 GKKFQDI-VGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGI 323
G D VG+ Y++PEVLK + G E D WS+GV + +L G PF+ + G
Sbjct: 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT 255
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 362
+ +++ +K IS AK+ + L D RL
Sbjct: 256 YSKIMDHKNSLNFPEDVEISKHAKNLICAFLT-DREVRL 293
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 88.9 bits (220), Expect = 2e-19
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 28/285 (9%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
R+Y ++LG G FG +A G A K++EK ++ E +IL+ +
Sbjct: 3 RQY---RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-N 58
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
+ VV A+E + + + + + GG+L I + + E+
Sbjct: 59 SQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNM---------------GNPGFEEER 103
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
A ++L + H V+RD+KPEN L + ++ +D GL+ I G+ +
Sbjct: 104 ALFYAAEILCGLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGESIRG 160
Query: 276 IVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
VG+ Y+APEVL ++ D W +G + Y ++ G+ PF + E +EV R +
Sbjct: 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET 220
Query: 335 RRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 374
S AK K LL KDP+ RL A + HP+ R
Sbjct: 221 EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 2e-19
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 28/264 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-VV 160
+LG G FG +A K + A+K ++K+ +I VE E ++L AL G +
Sbjct: 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVL-ALPGKPPFLT 64
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVV 220
+ ++ F+ + +Y ME GG+L+ I ++ ++ E A
Sbjct: 65 QLHSCFQTMDRLYFVMEYVNGGDLMYHI-----------------QQVGKFKEPHAVFYA 107
Query: 221 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGS 279
++ H G+++RD+K +N + + + +K DFG+ + I GK + G+
Sbjct: 108 AEIAIGLFFLHSKGIIYRDLKLDNVMLDA---EGHIKIADFGMCKENIFGGKTTRTFCGT 164
Query: 280 AYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338
Y+APE + + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + +
Sbjct: 165 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK-- 222
Query: 339 WPSISNSAKDFVKKLLVKDPRARL 362
S+S A K LL K P RL
Sbjct: 223 --SLSKEAVSICKGLLTKHPAKRL 244
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 87.8 bits (217), Expect = 2e-19
Identities = 82/297 (27%), Positives = 135/297 (45%), Gaps = 47/297 (15%)
Query: 93 DFDRR-----YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
D RR + + + +G G +G Y A + G+ A+K I+ + P V ++
Sbjct: 1 DLSRRNPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIK----LEPGEDFAVVQQE 56
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
I+ H N+V ++ ++ + ++I ME C GG L D ++ L+
Sbjct: 57 IIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQD---IYHVTGPLS--------- 104
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
E A V R+ L+ H G +HRD+K N L ++ +K DFG+S I
Sbjct: 105 -----ESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSAQI 156
Query: 268 KPG-KKFQDIVGSAYYVAPEV--LKRKSGPES--DVWSIGVITYILLCGRRPFWD-KTED 321
K + +G+ Y++APEV ++RK G D+W++G+ L + P +D
Sbjct: 157 TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR 216
Query: 322 GIFKEVLRNKPDFR------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
+F L K +F+ + W SNS FVK L K+P+ R TA + L HP+
Sbjct: 217 ALF---LMTKSNFQPPKLKDKMKW---SNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 2e-19
Identities = 79/284 (27%), Positives = 122/284 (42%), Gaps = 39/284 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG KA G A KK++K ++ + E KIL +V
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKIL-EKVSSRFIVSLA 59
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
AFE + + + M L GG+L I Y + +
Sbjct: 60 YAFETKDDLCLVMTLMNGGDLKYHI----------------------YNVGEPGFPEARA 97
Query: 224 LRVAAEC-----HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ AA+ HLH +V+RD+KPEN L + +++ +D GL+ +K GKK +
Sbjct: 98 IFYAAQIICGLEHLHQRRIVYRDLKPENVLLD---DHGNVRISDLGLAVELKGGKKIKGR 154
Query: 277 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ Y+APEVL+ + S D +++G Y ++ GR PF + E +E+ R +
Sbjct: 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMA 214
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 374
+ S AKD + LL KDP RL +A + HP +
Sbjct: 215 VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFK 258
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 87.8 bits (217), Expect = 3e-19
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 21/222 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K +G GQF Y AT + VA+KK++ +M+ A +D +E+ +L+ L H
Sbjct: 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHP 62
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT-EKDA 216
NV+K+ ++F +DN + I +EL + G+ L++MI +K R E+
Sbjct: 63 NVIKYLDSFIEDNELNIVLELADAGD-----LSQMI---------KYFKKQKRLIPERTV 108
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQD 275
Q+ H ++HRD+KP N + +K D GL F
Sbjct: 109 WKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGV---VKLGDLGLGRFFSSKTTAAHS 165
Query: 276 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 316
+VG+ YY++PE + +SD+WS+G + Y + + PF+
Sbjct: 166 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 91.0 bits (226), Expect = 4e-19
Identities = 84/303 (27%), Positives = 127/303 (41%), Gaps = 53/303 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I +L+G G G Y+A D RVA+KKI ++ P+ + RE KI L H
Sbjct: 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI-H 61
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+V Y+ D + VY M EG L + L S W +K+S E
Sbjct: 62 PGIVPVYSICSDGDPVYYTMPYIEGYTL---------KSLLKSVW----QKESLSKELAE 108
Query: 217 AVVVRQMLRV-------AAECHLHGLVHRDMKPENFL----------------FKSAKED 253
V L + H G++HRD+KP+N L FK +E+
Sbjct: 109 KTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEE 168
Query: 254 --SSLKATDFGL--SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYIL 308
+ + + S PGK IVG+ Y+APE L ES D++++GVI Y +
Sbjct: 169 DLLDIDVDERNICYSSMTIPGK----IVGTPDYMAPERLLGVPASESTDIYALGVILYQM 224
Query: 309 LCGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
L P+ + + G +++V+ + + P+ I K L DP R ++
Sbjct: 225 LTLSFPY--RRKKGRKISYRDVILSPIEV--APYREIPPFLSQIAMKALAVDPAERYSSV 280
Query: 366 QAL 368
Q L
Sbjct: 281 QEL 283
|
Length = 932 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 89.7 bits (222), Expect = 5e-19
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 39/229 (17%)
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
A H +VK ++ F+ D+ + + ME GG+L +I ++ ++ +
Sbjct: 120 AACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRL-------------KEHLPF 166
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPG 270
E + ++ Q++ E H ++HRD+K N FL + +K DFG S
Sbjct: 167 QEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG----IIKLGDFGFS------ 216
Query: 271 KKFQDIV---------GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE 320
K++ D V G+ YY+APE+ +RK ++D+WS+GVI Y LL RPF ++
Sbjct: 217 KQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ 276
Query: 321 DGIFKEVLRNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARLTAAQAL 368
I ++VL K D P+P +S+ K + LL K+P R T Q L
Sbjct: 277 REIMQQVLYGKYD----PFPCPVSSGMKALLDPLLSKNPALRPTTQQLL 321
|
Length = 478 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 87.8 bits (217), Expect = 5e-19
Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 26/265 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG +A K +G AVK ++K ++ + + E +L H +V
Sbjct: 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ +F+ +Y ++ GGEL F ++++ + E A
Sbjct: 61 LHYSFQTTEKLYFVLDFVNGGEL-----------------FFHLQRERSFPEPRARFYAA 103
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 280
++ H +V+RD+KPEN L S + TDFGL + I G+
Sbjct: 104 EIASALGYLHSINIVYRDLKPENILLDSQ---GHVVLTDFGLCKEGIAQSDTTTTFCGTP 160
Query: 281 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEV++++ + D W +G + Y +L G PF+ + ++ +L R
Sbjct: 161 EYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR---- 216
Query: 340 PSISNSAKDFVKKLLVKDPRARLTA 364
P S +A +++LL KD + RL A
Sbjct: 217 PGASLTAWSILEELLEKDRQRRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 88.1 bits (218), Expect = 5e-19
Identities = 85/320 (26%), Positives = 137/320 (42%), Gaps = 57/320 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE----DVKREVKILQA 152
RY K +G G +G A D+ G +VA+KK+ + P E RE+++L+
Sbjct: 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYR-----PFQSELFAKRAYRELRLLKH 70
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+ HENV+ + F D LDR + + K + +
Sbjct: 71 MK-HENVIGLLDVFTPD-------------LSLDRFHDFYLVMPFMGTDLGKLMKHEKLS 116
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E +V QML+ H G++HRD+KP N + ED LK DFGL+ + +
Sbjct: 117 EDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--QTDSE 171
Query: 273 FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGR------------------ 312
V + +Y APEV+ D+WS+G I +L G+
Sbjct: 172 MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKV 231
Query: 313 -----RPFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLT 363
+ F K + K ++ P FR+K + P+ + A + ++K+LV D +R+T
Sbjct: 232 TGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRIT 291
Query: 364 AAQALSHPWVREGGDASEIP 383
AA+AL+HP+ E D +
Sbjct: 292 AAEALAHPYFEEFHDPEDET 311
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 87.8 bits (217), Expect = 9e-19
Identities = 88/323 (27%), Positives = 132/323 (40%), Gaps = 61/323 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 18 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 75
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
ENV+ + F E+ N VY+ T L A I K +
Sbjct: 76 ENVIGLLDVFTPARSLEEFNDVYLV-------------------THLMGADLNNIVKCQK 116
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T+ ++ Q+LR H ++HRD+KP N + ED LK DFGL+
Sbjct: 117 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTD 171
Query: 271 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 172 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 231
Query: 329 R--NKPD---FRRKPWPSISN----------------------SAKDFVKKLLVKDPRAR 361
R P ++ S N A D ++K+LV D R
Sbjct: 232 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 291
Query: 362 LTAAQALSHPWVREGGDASEIPI 384
+TAAQAL+H + + D + P+
Sbjct: 292 ITAAQALAHAYFAQYHDPDDEPV 314
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 85.8 bits (212), Expect = 1e-18
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 21/222 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K +G GQF Y AT +G VA+KK++ ++ A D +E+ +L+ L H
Sbjct: 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHP 62
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT-EKDA 216
NV+K+Y +F +DN + I +EL + G+ L++MI +K R EK
Sbjct: 63 NVIKYYASFIEDNELNIVLELADAGD-----LSRMIK---------HFKKQKRLIPEKTV 108
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQD 275
Q+ H ++HRD+KP N + +K D GL F
Sbjct: 109 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHS 165
Query: 276 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 316
+VG+ YY++PE + +SD+WS+G + Y + + PF+
Sbjct: 166 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 86.9 bits (215), Expect = 1e-18
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 26/265 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG +A K++G AVK ++K ++ + E +L H +V
Sbjct: 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ +F+ +Y ++ GGEL F ++++ + E A
Sbjct: 61 LHYSFQTAEKLYFVLDYVNGGEL-----------------FFHLQRERCFLEPRARFYAA 103
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 280
++ H +++RD+KPEN L S + TDFGL + ++P + G+
Sbjct: 104 EVASAIGYLHSLNIIYRDLKPENILLDS---QGHVVLTDFGLCKEGVEPEETTSTFCGTP 160
Query: 281 YYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339
Y+APEVL+++ + D W +G + Y +L G PF+ + ++ +L
Sbjct: 161 EYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP---- 216
Query: 340 PSISNSAKDFVKKLLVKDPRARLTA 364
+ +A D + LL KD R RL A
Sbjct: 217 GGKTVAACDLLVGLLHKDQRRRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 87.4 bits (216), Expect = 1e-18
Identities = 86/342 (25%), Positives = 141/342 (41%), Gaps = 66/342 (19%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG + K G A+K + K M+ V ++ E IL A VVK
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDIL-VEADSLWVVK 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ +F+D +Y+ ME GG+++ L ++KD+ TE++ +
Sbjct: 66 MFYSFQDKLNLYLIMEFLPGGDMMT----------------LLMKKDT-LTEEETQFYIA 108
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--------- 272
+ + H G +HRD+KP+N L S +K +DFGL +K +
Sbjct: 109 ETVLAIDSIHQLGFIHRDIKPDNLLLDSK---GHVKLSDFGLCTGLKKAHRTEFYRNLNH 165
Query: 273 -------FQDI--------------------VGSAYYVAPEVLKRKS-GPESDVWSIGVI 304
FQ++ VG+ Y+APEV + D WS+GVI
Sbjct: 166 SLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVI 225
Query: 305 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK-DPRARLT 363
Y +L G PF +T +K+V+ K P IS AKD + + + + R
Sbjct: 226 MYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAP 285
Query: 364 AAQALSHPWVREGGD-------ASEIPIDISVLNNMRQFVKY 398
+ + EG D + IPI+I +++ F ++
Sbjct: 286 GVEEIKTNPFFEGVDWEHIRERPAAIPIEIKSIDDTSNFDEF 327
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 86.6 bits (214), Expect = 3e-18
Identities = 86/325 (26%), Positives = 132/325 (40%), Gaps = 74/325 (22%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG +A A+K + K ++L V VK E IL A A +E VV+
Sbjct: 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDIL-AEADNEWVVR 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y +F+D + +Y M+ GG+++ ++ I + E A +
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI-----------------FPEDLARFYIA 108
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL------------------ 263
++ H G +HRD+KP+N L D +K TDFGL
Sbjct: 109 ELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQSGDH 165
Query: 264 --------------------SDFIKP-----GKKFQ-----DIVGSAYYVAPEVLKRKSG 293
D +KP ++ Q +VG+ Y+APEVL R
Sbjct: 166 VRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGY 225
Query: 294 PE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 352
+ D WS+GVI Y +L G+ PF +T +V+ + P +S A D + K
Sbjct: 226 TQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIK 285
Query: 353 LLVKDPRARL---TAAQALSHPWVR 374
L + P RL A + +HP+ +
Sbjct: 286 -LCRGPEDRLGKNGADEIKAHPFFK 309
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 3e-18
Identities = 73/286 (25%), Positives = 127/286 (44%), Gaps = 28/286 (9%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
R+Y ++LG G FG +A G A KK+EK ++ E +IL+ +
Sbjct: 3 RQY---RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-N 58
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
VV A+E + + + + L GG+L I ++ + E
Sbjct: 59 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM---------------GEAGFEEGR 103
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
A ++ + H +V+RD+KPEN L + ++ +D GL+ + G+ +
Sbjct: 104 AVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQTIKG 160
Query: 276 IVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
VG+ Y+APEV+K + S D W++G + Y ++ G+ PF + + +EV R +
Sbjct: 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV 220
Query: 335 RRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 375
+ + S A+ K LL KDP+ RL A + HP ++
Sbjct: 221 QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 84.4 bits (208), Expect = 4e-18
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 29/283 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 1 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQ 58
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
V K+Y ++ D ++I ME GG LD + +
Sbjct: 59 -CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD------------------LLEPGPLD 99
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 271
E A ++R++L+ H +HRD+K N L E +K DFG++ + +
Sbjct: 100 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQI 156
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
K VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N
Sbjct: 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN 216
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P + S K+FV+ L K+P R TA + L H ++
Sbjct: 217 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 84.7 bits (209), Expect = 6e-18
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 26/266 (9%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG +A K + A+K ++K+ +I VE E ++L + +
Sbjct: 7 VLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQL 66
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
++ F+ + +Y ME GG+L+ I++ ++ E A +
Sbjct: 67 HSCFQTVDRLYFVMEYVNGGDLM-----------------YHIQQVGKFKEPQAVFYAAE 109
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAY 281
+ H G+++RD+K +N + S + +K DFG+ + + G + G+
Sbjct: 110 ISVGLFFLHRRGIIYRDLKLDNVMLDS---EGHIKIADFGMCKEHMVDGVTTRTFCGTPD 166
Query: 282 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + +
Sbjct: 167 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK---- 222
Query: 341 SISNSAKDFVKKLLVKDPRARLTAAQ 366
S+S A K L+ K P RL
Sbjct: 223 SLSKEAVSICKGLMTKHPSKRLGCGP 248
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 6e-18
Identities = 76/349 (21%), Positives = 136/349 (38%), Gaps = 78/349 (22%)
Query: 93 DFDRRYT-IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK------- 144
RY G LG G +G A D G VA+KK++ ++ + +
Sbjct: 5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIH 64
Query: 145 ----REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
RE+KI+ + HEN++ + + + +++ + M++ L K++ +
Sbjct: 65 FTTLRELKIMNEIK-HENIMGLVDVYVEGDFINLVMDIMASD------LKKVVDRKI--- 114
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R TE ++ Q+L H +HRD+ P N S K D
Sbjct: 115 ---------RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI---CKIAD 162
Query: 261 FGLS---------------DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGV 303
FGL+ + ++ ++ V + +Y APE+L K D+WS+G
Sbjct: 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGC 222
Query: 304 ITYILLCGRRPF-----------------------W-DKTEDGIFKEVLRNKPDFRRKPW 339
I LL G+ F W + ++ E KP + +
Sbjct: 223 IFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIF 282
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG---DASEIPID 385
P+ S+ A D ++ LL +P R++A +AL H + + D S++P +
Sbjct: 283 PNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPCDPSQLPFN 331
|
Length = 335 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 84.7 bits (209), Expect = 7e-18
Identities = 68/264 (25%), Positives = 124/264 (46%), Gaps = 28/264 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-VV 160
+LG G FG +A K + A+K ++K+ +I VE E ++L AL+G +
Sbjct: 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVL-ALSGKPPFLT 64
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVV 220
+ ++ F+ + +Y ME GG+L+ I++ R+ E A
Sbjct: 65 QLHSCFQTMDRLYFVMEYVNGGDLM-----------------YQIQQVGRFKEPHAVFYA 107
Query: 221 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGS 279
++ H G+++RD+K +N + S + +K DFG+ + + G + G+
Sbjct: 108 AEIAIGLFFLHSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENMWDGVTTKTFCGT 164
Query: 280 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338
Y+APE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + +
Sbjct: 165 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK-- 222
Query: 339 WPSISNSAKDFVKKLLVKDPRARL 362
S+S A K L+ K P RL
Sbjct: 223 --SMSKEAVAICKGLMTKHPGKRL 244
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 8e-18
Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 76/334 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVKREVKILQA 152
+RY K +G G G A D G VAVKK+ + N+ + RE+ +L+
Sbjct: 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQT----HAKRAYRELVLLKC 76
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 77 V-NHKNIISLLNVFTPQKSLEEFQDVYLVMEL------MDANLCQVIHMELD-------- 121
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 122 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 172
Query: 267 IKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV L D+WS+G I L+ G F W+
Sbjct: 173 ACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWN 232
Query: 318 KTEDGI----------FKEVLR----NKPD---------FRRKPWPSIS-------NSAK 347
K + + + +R N+P F +PS S + A+
Sbjct: 233 KVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQAR 292
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
D + K+LV DP R++ +AL HP++ D +E
Sbjct: 293 DLLSKMLVIDPDKRISVDEALRHPYITVWYDPAE 326
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 84.8 bits (209), Expect = 8e-18
Identities = 88/339 (25%), Positives = 138/339 (40%), Gaps = 84/339 (24%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 71
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VY+ MEL +D L ++I L
Sbjct: 72 CVNHKNIISLLNVFTPQKSLEEFQDVYLVMEL------MDANLCQVIQMELD-------- 117
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 118 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 168
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WD 317
V + YY APEV+ E+ D+WS+G I IL GR W+
Sbjct: 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 228
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------------- 344
K + +++ P+F +K P++ N
Sbjct: 229 K----VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 284
Query: 345 -SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
A+D + K+LV DP R++ +AL HP++ D +E+
Sbjct: 285 SQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDPAEV 323
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 1e-17
Identities = 87/311 (27%), Positives = 135/311 (43%), Gaps = 62/311 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G+G FG + TD +G RVA+KK+ L ++ + V RE+K+L H+NV+
Sbjct: 8 IGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNL-VSCKRVFRELKMLCFFK-HDNVLSAL 65
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ + + E+ EL+ L K+I + + V + Q+
Sbjct: 66 DILQPPHIDPFE-EIYVVTELMQSDLHKIIVS------------PQPLSSDHVKVFLYQI 112
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSA 280
LR H G++HRD+KP N L S + LK DFGL+ +P + Q++V +
Sbjct: 113 LRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVEEPDESKHMTQEVV-TQ 168
Query: 281 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF----------------------- 315
YY APE+L R D+WS+G I LL R F
Sbjct: 169 YYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEA 228
Query: 316 WDKTEDGIFKEVLRNKPDFRRKPWPSIS----------NSAKDFVKKLLVKDPRARLTAA 365
+G +LR KP PS+ + A + ++LV DP R++AA
Sbjct: 229 MRSACEGARAHILRGPH----KP-PSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAA 283
Query: 366 QALSHPWVREG 376
AL+HP++ EG
Sbjct: 284 DALAHPYLDEG 294
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 83.2 bits (205), Expect = 2e-17
Identities = 66/291 (22%), Positives = 132/291 (45%), Gaps = 43/291 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKILQALAGHENVV 160
+++G G + + K +R+ K+ K +++ ++ V+ E + + + H +V
Sbjct: 1 RVIGRGSYAKVLLVRLKKT-ERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 59
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVV 220
++ F+ ++ ++ +E GG+L+ +++ + E+ A
Sbjct: 60 GLHSCFQTESRLFFVIEYVNGGDLM-----------------FHMQRQRKLPEEHARFYS 102
Query: 221 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGS 279
++ H G+++RD+K +N L S + +K TD+G+ + ++PG G+
Sbjct: 103 AEISLALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGT 159
Query: 280 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLR 329
Y+APE+L+ + G D W++GV+ + ++ GR PF TED +F+ +L
Sbjct: 160 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 219
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 374
+ R S+S A +K L KDP+ RL A HP+ R
Sbjct: 220 KQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 266
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 83.5 bits (206), Expect = 3e-17
Identities = 88/332 (26%), Positives = 133/332 (40%), Gaps = 72/332 (21%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG +A A+K + K ++ V VK E IL A A +E VVK
Sbjct: 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDIL-AEADNEWVVK 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y +F+D + +Y M+ GG+++ L IR + + E A +
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMS----------------LLIRMEV-FPEVLARFYIA 108
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL------------------ 263
++ H G +HRD+KP+N L D +K TDFGL
Sbjct: 109 ELTLAIESVHKMGFIHRDIKPDNILIDL---DGHIKLTDFGLCTGFRWTHNSKYYQKGSH 165
Query: 264 --SDFIKPGKKFQDI----------------------------VGSAYYVAPEVLKRKSG 293
D ++P + D+ VG+ Y+APEVL RK
Sbjct: 166 IRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGY 225
Query: 294 PE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 352
+ D WS+GVI + +L G+ PF T +V+ + P +S A D + K
Sbjct: 226 TQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITK 285
Query: 353 LL--VKDPRARLTAAQALSHPWVREGGDASEI 382
L ++ R A +HP+ E +S+I
Sbjct: 286 LCCSAEERLGRNGADDIKAHPFFSEVDFSSDI 317
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 3e-17
Identities = 83/304 (27%), Positives = 131/304 (43%), Gaps = 57/304 (18%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK--REVKILQALAGHE 157
+GK+ G G F A + G A+K ++K+ ++E V RE++ L+ L+ H
Sbjct: 4 LGKI-GEGTFSEVLKAQSRKTGKYYAIKCMKKHFK----SLEQVNNLREIQALRRLSPHP 58
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY--TEKD 215
N+++ D +A+ EL+D L ++I K + EK
Sbjct: 59 NILRLIEVLFDRKTGRLALVF----ELMDMNLYELI-------------KGRKRPLPEKR 101
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
+ Q+L+ H +G+ HRD+KPEN L K D LK DFG I + +
Sbjct: 102 VKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK----DDILKLADFGSCRGIYSKPPYTE 157
Query: 276 IVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVL-- 328
+ + +Y APE L GP+ D+W++G + + +L F E D I K +VL
Sbjct: 158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGT 217
Query: 329 -RNKPDFRRKPW-------------------PSISNSAKDFVKKLLVKDPRARLTAAQAL 368
+ + + P+ S D +KKLL DP R+TA QAL
Sbjct: 218 PDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQAL 277
Query: 369 SHPW 372
HP+
Sbjct: 278 RHPY 281
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 83.0 bits (205), Expect = 4e-17
Identities = 81/325 (24%), Positives = 134/325 (41%), Gaps = 74/325 (22%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG + K G A+K + K++M + VK E +L A + VV
Sbjct: 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVL-AESDSPWVVS 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y +F+D Y+Y+ ME GG+L+ T L I+ D+ ++E +
Sbjct: 66 LYYSFQDAQYLYLIMEFLPGGDLM---------TML-------IKYDT-FSEDVTRFYMA 108
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS----------------- 264
+ + H G +HRD+KP+N L +K +DFGLS
Sbjct: 109 ECVLAIEAVHKLGFIHRDIKPDNILIDR---GGHIKLSDFGLSTGFHKQHDSAYYQKLLQ 165
Query: 265 --------------------------DFIKPGKKFQDI-----VGSAYYVAPEV-LKRKS 292
D I KK + + VG+ Y+APE+ L++
Sbjct: 166 GKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGY 225
Query: 293 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 352
G E D WS+G I + L G PF + +++++ + +S A+D +++
Sbjct: 226 GQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRR 285
Query: 353 LLVKDPRARL---TAAQALSHPWVR 374
L+ + RL A + SHP+ R
Sbjct: 286 LIT-NAENRLGRGGAHEIKSHPFFR 309
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 82.8 bits (204), Expect = 4e-17
Identities = 86/334 (25%), Positives = 137/334 (41%), Gaps = 76/334 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
H+N++ N F E+ VYI MEL +D L ++I L
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL------MDANLCQVIQMELD-------- 124
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 ------HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLART 175
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WD 317
V + YY APEV+ E+ D+WS+G I ++ G F W+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
Query: 318 KTEDGI--------------FKEVLRNKPDFR----RKPWPSI------------SNSAK 347
K + + + + N+P + K +P + ++ A+
Sbjct: 236 KVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQAR 295
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
D + K+LV D R++ +AL HP++ D SE
Sbjct: 296 DLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 82.6 bits (204), Expect = 5e-17
Identities = 78/289 (26%), Positives = 119/289 (41%), Gaps = 58/289 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-----VKREVKILQALAGHEN 158
+G G G Y + G A+K I N ED + RE++IL+ H N
Sbjct: 82 IGSGAGGTVYKVIHRPTGRLYALKVIYGNH-------EDTVRRQICREIEILRD-VNHPN 133
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
VVK ++ F+ + + + +E +GG L +A E+ A
Sbjct: 134 VVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIAD---------------------EQFLAD 172
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIV 277
V RQ+L A H +VHRD+KP N L SAK ++K DFG+S + + V
Sbjct: 173 VARQILSGIAYLHRRHIVHRDIKPSNLLINSAK---NVKIADFGVSRILAQTMDPCNSSV 229
Query: 278 GSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPF-------WDKTEDGIF 324
G+ Y++PE + G D+WS+GV GR PF W I
Sbjct: 230 GTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI- 288
Query: 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ P+ + S + F+ L ++P R +A Q L HP++
Sbjct: 289 --CMSQPPE----APATASREFRHFISCCLQREPAKRWSAMQLLQHPFI 331
|
Length = 353 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 81.3 bits (200), Expect = 5e-17
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 37/287 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 1 DPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQ 58
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
V K+Y ++ ++I ME GG LD + A +
Sbjct: 59 -CDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA------------------GPFD 99
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 271
E A +++++L+ H +HRD+K N L E +K DFG++ + +
Sbjct: 100 EFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQI 156
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
K VG+ +++APEV+++ + ++D+WS+G+ L G P D + + +N
Sbjct: 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN 216
Query: 331 KPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
P P++ S K+F+ L KDP R TA + L H ++
Sbjct: 217 NP-------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 7e-17
Identities = 46/152 (30%), Positives = 91/152 (59%), Gaps = 12/152 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 525
+G +DF EF+ TL ++++ DSE+ ++ AF+ FD D +GFI+ ELR + G
Sbjct: 60 GNGTIDFPEFL--TLMARKMKDTDSEE-EIKE--AFKVFDRDGNGFISAAELRHVMTNLG 114
Query: 526 LKGS---IDPLLEEADIDKDGRISLSEFRRLL 554
K + +D ++ EAD+D DG+I+ EF +++
Sbjct: 115 EKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146
|
Length = 149 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 81.6 bits (201), Expect = 8e-17
Identities = 81/323 (25%), Positives = 132/323 (40%), Gaps = 61/323 (18%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
RY +G G +G A D +VAVKK+ + L I RE+++L+ +
Sbjct: 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSL-IHARRTYRELRLLKHMK- 72
Query: 156 HENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
HENV+ + F E+ N VY+ T L A I K
Sbjct: 73 HENVIGLLDVFTPATSIENFNEVYLV-------------------TNLMGADLNNIVKCQ 113
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
+ +++ ++ Q+LR H G++HRD+KP N + ED L+ DFGL+ +
Sbjct: 114 KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDCELRILDFGLAR--QA 168
Query: 270 GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
+ V + +Y APE++ D+WS+G I LL G+ F K +
Sbjct: 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRI 228
Query: 328 LR----NKPDFRRK--------------PWPSISNS---------AKDFVKKLLVKDPRA 360
+ P+ +K P A D ++K+LV D
Sbjct: 229 MEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDK 288
Query: 361 RLTAAQALSHPWVREGGDASEIP 383
R++A++AL+HP+ + D + P
Sbjct: 289 RISASEALAHPYFSQYHDPEDEP 311
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 82.6 bits (204), Expect = 1e-16
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 45/299 (15%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
K+ ++Y I ++LG G G A ++G+ AVK ++ M + EV L
Sbjct: 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCL 85
Query: 151 ------QALAGHENVVKFYNAFEDDNYVYIAMEL--CEGGELLDRILAKMISTTLTSAWF 202
+ HE+ K + +N + IA+ L G+L I ++
Sbjct: 86 LNCDFFSIVKCHEDFAK-KDPRNPENVLMIALVLDYANAGDLRQEIKSRA---------- 134
Query: 203 LAIRKDSR-YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261
K +R + E +A ++ Q+L H ++HRD+K N L S + +K DF
Sbjct: 135 ----KTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS---NGLVKLGDF 187
Query: 262 GLSDFIKP------GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP 314
G S G+ F G+ YYVAPE+ +RK ++D++S+GV+ Y LL +RP
Sbjct: 188 GFSKMYAATVSDDVGRTF---CGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRP 244
Query: 315 FWDKTEDGI-FKEVLRNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
F DG +EV+ R P P SIS ++ V LL DP+ R ++++ L+ P
Sbjct: 245 F-----DGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298
|
Length = 496 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 80.0 bits (197), Expect = 1e-16
Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 65/312 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK----REVKILQA 152
++ + ++G G +G K + VA+KK + ++ E+VK RE+K+L+
Sbjct: 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSE-----ENEEVKETTLRELKMLRT 56
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGG--ELLDRILAKMISTTLTSAWFLAIRKDSR 210
L EN+V+ AF +Y+ E E ELL+ + + + S +
Sbjct: 57 LK-QENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIY-------- 107
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
Q+++ CH + +VHRD+KPEN L + LK DFG + + G
Sbjct: 108 -----------QLIKAIHWCHKNDIVHRDIKPENLLISH---NDVLKLCDFGFARNLSEG 153
Query: 271 K--KFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK- 325
+ + V + +Y +PE +L G D+WS+G I L G+ F ++E D +F
Sbjct: 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTI 213
Query: 326 ------------EVLRNKPDFRRKPWPSISNSAK--------------DFVKKLLVKDPR 359
++ + P F +P++++ D +K LL +P
Sbjct: 214 QKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPT 273
Query: 360 ARLTAAQALSHP 371
R Q L+HP
Sbjct: 274 DRYLTEQCLNHP 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 4e-16
Identities = 70/276 (25%), Positives = 119/276 (43%), Gaps = 25/276 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A G A KK+EK ++ E +IL+ + VV
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVS 64
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
A+E + + + + + GG+L I + + E+ A
Sbjct: 65 LAYAYETKDALCLVLTIMNGGDLKFHIYN---------------MGNPGFDEQRAIFYAA 109
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
++ + +V+RD+KPEN L + ++ +D GL+ I G+ + VG+
Sbjct: 110 ELCCGLEDLQRERIVYRDLKPENILLD---DRGHIRISDLGLAVQIPEGETVRGRVGTVG 166
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APEV+ + S D W +G + Y ++ G+ PF + E +EV R + + +
Sbjct: 167 YMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSE 226
Query: 341 SISNSAKDFVKKLLVKDPRARL-----TAAQALSHP 371
S AK + LL K+P+ RL AA HP
Sbjct: 227 KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP 262
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 5e-16
Identities = 62/271 (22%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+++G G + + K N A+K ++K + ++ V+ E + + + + +V
Sbjct: 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
++ F+ + +++ +E GG+L+ +++ + E+ A
Sbjct: 61 LHSCFQTTSRLFLVIEYVNGGDLM-----------------FHMQRQRKLPEEHARFYAA 103
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 280
++ H G+++RD+K +N L D +K TD+G+ + + PG G+
Sbjct: 104 EICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDYGMCKEGLGPGDTTSTFCGTP 160
Query: 281 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWD--------KTEDGIFKEVLRNK 331
Y+APE+L+ + G D W++GV+ + ++ GR PF D TED +F+ +L
Sbjct: 161 NYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF-DIITDNPDMNTEDYLFQVILEKP 219
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARL 362
R +S A +K L KDP+ RL
Sbjct: 220 IRIPR----FLSVKASHVLKGFLNKDPKERL 246
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 6e-16
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 25/279 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A G A KK+EK ++ E +IL+ + VV
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVS 64
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
A+E + + + + L GG+L I + + E+ A
Sbjct: 65 LAYAYETKDALCLVLTLMNGGDLKFHIYNMG---------------NPGFDEERAVFYAA 109
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
++ + H +V+RD+KPEN L + ++ +D GL+ I G+ + VG+
Sbjct: 110 EITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGETIRGRVGTVG 166
Query: 282 YVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APEV+K + D W +G + Y ++ G+ PF + E +EV R + + +
Sbjct: 167 YMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSE 226
Query: 341 SISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 374
S +A+ ++LL KDP RL A + +HP+ R
Sbjct: 227 KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 78.1 bits (192), Expect = 7e-16
Identities = 84/308 (27%), Positives = 133/308 (43%), Gaps = 67/308 (21%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALAG--HENV 159
+G G +G Y A D +G VA+K +++ N+ LP++ REV +L+ L H N+
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLST---VREVALLKRLEAFDHPNI 64
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR-YTEKDAAV 218
V+ M++C DR TL F + +D R Y +K
Sbjct: 65 VRL-------------MDVCATSRT-DR----ETKVTLV---FEHVDQDLRTYLDKVPPP 103
Query: 219 ---------VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
++RQ LR H + +VHRD+KPEN L S +K DFGL+
Sbjct: 104 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GQVKLADFGLARIYSC 160
Query: 270 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW------DK---- 318
+V + +Y APEVL + + D+WS+G I + + R+P + D+
Sbjct: 161 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKI 219
Query: 319 -------TEDGIFKEVLRNKPDFR-RKPW------PSISNSAKDFVKKLLVKDPRARLTA 364
ED ++V + F R P P I S + ++L +P R++A
Sbjct: 220 FDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISA 279
Query: 365 AQALSHPW 372
+AL HP+
Sbjct: 280 FRALQHPF 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 8e-16
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 51/261 (19%)
Query: 145 REVKILQALAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
RE++I+ HE +V FY AF ++N + + ME + G L DRI K
Sbjct: 52 RELQIM-----HECRSPYIVSFYGAFLNENNICMCMEFMDCGSL-DRIYKK--------- 96
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
I + K A VV + + H ++HRD+KP N L S + +K D
Sbjct: 97 -GGPIPVE--ILGKIAVAVVEGLTYLYNV---HRIMHRDIKPSNILVNSRGQ---IKLCD 147
Query: 261 FGLSDFIKPGKKFQDI----VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPF 315
FG+S G+ I VG++ Y++PE ++ K +SDVWS+G+ L G+ PF
Sbjct: 148 FGVS-----GELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPF 202
Query: 316 WDKTED--------GIFKEVLR--NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
D GI + + +P R P +DFV L+KDP R T
Sbjct: 203 AFSNIDDDGQDDPMGILDLLQQIVQEPP-PRLPSSDFPEDLRDFVDACLLKDPTERPTPQ 261
Query: 366 QALSHPWVREGGDASEIPIDI 386
Q + P + +D+
Sbjct: 262 QLCAMPPFIQA--LRASNVDL 280
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 9e-16
Identities = 87/341 (25%), Positives = 126/341 (36%), Gaps = 91/341 (26%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKAN--GDRVAVKKIEKNKM----ILPIAVEDVKREVKIL 150
+Y I +G G +G Y A K G A+KK + +K I A RE+ +L
Sbjct: 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSAC----REIALL 56
Query: 151 QALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
+ L HENVV F + VY+ + E D I K
Sbjct: 57 RELK-HENVVSLVEVFLEHADKSVYLLFDYAE----HD---------------LWQIIKF 96
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGL--------VHRDMKPENFLFKS-AKEDSSLKAT 259
R + + M++ L+G+ +HRD+KP N L E +K
Sbjct: 97 HR--QAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIG 154
Query: 260 DFGLSD-FIKPGKKFQD---IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRR 313
D GL+ F P K D +V + +Y APE+L R D+W+IG I LL
Sbjct: 155 DLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEP 214
Query: 314 PFWDKTED-------------GIFK-----------------EVLRNKPDFRRKPWPS-- 341
F + IF+ E DF+ K +PS
Sbjct: 215 IFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNS 274
Query: 342 --------ISNSAK--DFVKKLLVKDPRARLTAAQALSHPW 372
++ D ++KLL DP R+TA +AL HP+
Sbjct: 275 LAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 9e-16
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 24/279 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG +A G A KK+ K ++ E E +IL A +V
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRIL-AKVHSRFIVSLA 59
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
AF+ + + M + GG+L I + ++ + E A Q+
Sbjct: 60 YAFQTKTDLCLVMTIMNGGDLRYHI-------------YNVDEENPGFPEPRACFYTAQI 106
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYY 282
+ H +++RD+KPEN L D +++ +D GL+ +K G+ K + G+ +
Sbjct: 107 ISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKGYAGTPGF 163
Query: 283 VAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
+APE+L+ + S D +++GV Y ++ R PF + E KE+ + +
Sbjct: 164 MAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDK 223
Query: 342 ISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 375
S ++K F + LL KDP RL +HP R+
Sbjct: 224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 2e-15
Identities = 87/314 (27%), Positives = 131/314 (41%), Gaps = 74/314 (23%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE----NV 159
LG G G + +G +A K I I P + RE+K+L HE +
Sbjct: 9 LGAGNGGVVTKVLHRPSGLIMARKLIHLE--IKPAIRNQIIRELKVL-----HECNSPYI 61
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
V FY AF D + I ME +GG LD++L K A R K + V
Sbjct: 62 VGFYGAFYSDGEISICMEHMDGGS-LDQVLKK------------AGRIPENILGKISIAV 108
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--- 276
+R + + + H ++HRD+KP N L S E +K DFG+S G+ +
Sbjct: 109 LRGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANS 157
Query: 277 -VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP------------FWDKTEDG 322
VG+ Y++PE L+ +SD+WS+G+ + GR P F +G
Sbjct: 158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEG 217
Query: 323 IFKEVLR----NKPDFRR-------------KPWPSI-----SNSAKDFVKKLLVKDPRA 360
KE R + PD R +P P + S+ +DFV K L K+P+
Sbjct: 218 EAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKE 277
Query: 361 RLTAAQALSHPWVR 374
R + HP+++
Sbjct: 278 RADLKELTKHPFIK 291
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 76.1 bits (187), Expect = 2e-15
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 31/275 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG K G A KK++K ++ + E +IL+ + +V
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS-PFIVNLA 59
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
AFE ++ + M L GG+L I L + + Y+ + ++
Sbjct: 60 YAFESKTHLCLVMSLMNGGDLKYHIYN-------VGERGLEMERVIHYSAQITCGIL--- 109
Query: 224 LRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
HLH +V+RDMKPEN L + + + +D GL+ +K GK G+
Sbjct: 110 -------HLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGLAVELKDGKTITQRAGTNG 159
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRR 336
Y+APE+LK + D +++G Y ++ GR PF D E + + + L ++ F
Sbjct: 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEH 219
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
+ + + +KD + L K P RL + + P
Sbjct: 220 Q---NFTEESKDICRLFLAKKPEDRLGSREKNDDP 251
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 2e-15
Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 32/240 (13%)
Query: 126 VKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 185
V+KI K K I E + Q + + N +K Y + + M+ + G+L
Sbjct: 45 VQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLF 97
Query: 186 DRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 245
D ++K+ + +E + ++RQ++ + H H ++H D+K EN
Sbjct: 98 D-----------------LLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENV 140
Query: 246 LFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGV 303
L+ AK+ + D+GL I P D G+ Y +PE +K + S D W++GV
Sbjct: 141 LYDRAKD--RIYLCDYGLCKIIGTPSC--YD--GTLDYFSPEKIKGHNYDVSFDWWAVGV 194
Query: 304 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+TY LL G+ PF + ++ + E L + + ++S +A DFV+ +L + RLT
Sbjct: 195 LTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLT 254
|
Length = 267 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 76.9 bits (189), Expect = 2e-15
Identities = 70/278 (25%), Positives = 118/278 (42%), Gaps = 38/278 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG + A+K I K ++ V E +L A +V
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVL-AQVNCPFIVPLK 59
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+F+ +Y+ + GGEL F ++++ R+ A ++
Sbjct: 60 FSFQSPEKLYLVLAFINGGEL-----------------FHHLQREGRFDLSRARFYTAEL 102
Query: 224 LRVAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKPGKKFQDIVGSAY 281
L A E H +++RD+KPEN L + DFGL +K K G+
Sbjct: 103 L-CALENLHKFNVIYRDLKPENILLDYQ---GHIALCDFGLCKLNMKDDDKTNTFCGTPE 158
Query: 282 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRK 337
Y+APE+L ++ D W++GV+ Y +L G PF+D+ + +++++L+ PD
Sbjct: 159 YLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD---- 214
Query: 338 PWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPW 372
AKD + LL +DP RL A + +HP+
Sbjct: 215 ---GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPF 249
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 75.5 bits (185), Expect = 4e-15
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 42/285 (14%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + + +G G +G Y A + G+ AVK I K+ +++E+ +++ H
Sbjct: 11 YELIQRVGSGTYGDVYKARNLHTGELAAVKII---KLEPGDDFSLIQQEIFMVKECK-HC 66
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+V ++ ++ ++I ME C GG L D ++ L+ E A
Sbjct: 67 NIVAYFGSYLSREKLWICMEYCGGGSLQD---IYHVTGPLS--------------ELQIA 109
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDI 276
V R+ L+ A H G +HRD+K N L ++ +K DFG++ I K +
Sbjct: 110 YVCRETLQGLAYLHSKGKMHRDIKGANILLT---DNGDVKLADFGVAAKITATIAKRKSF 166
Query: 277 VGSAYYVAPEV--LKRKSGPES--DVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNK 331
+G+ Y++APEV +++ G D+W++G+ L + P +D +F L +K
Sbjct: 167 IGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMSK 223
Query: 332 PDFR------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
+F+ + W S++ +FVK L K+P+ R TA + L+H
Sbjct: 224 SNFQPPKLKDKTKW---SSTFHNFVKISLTKNPKKRPTAERLLTH 265
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 74.0 bits (182), Expect = 1e-14
Identities = 79/291 (27%), Positives = 117/291 (40%), Gaps = 52/291 (17%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR---EVKILQALAGHENVV 160
LG G +G G +AVK+I + ++ KR ++ I V
Sbjct: 9 LGRGAYGVVDKMRHVPTGTIMAVKRIRAT-----VNSQEQKRLLMDLDISMRSVDCPYTV 63
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE----KDA 216
FY A + V+I ME+ + T+L + K E K A
Sbjct: 64 TFYGALFREGDVWICMEV--------------MDTSLDKFYKKVYDKGLTIPEDILGKIA 109
Query: 217 AVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK 272
+V+ A +LH ++HRD+KP N L + +K DFG+S + K
Sbjct: 110 VSIVK------ALEYLHSKLSVIHRDVKPSNVL---INRNGQVKLCDFGISGYLVDSVAK 160
Query: 273 FQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYI-LLCGRRPF--WDKTEDGIF 324
D G Y+APE + + + SDVWS+G IT I L GR P+ W KT
Sbjct: 161 TIDA-GCKPYMAPERINPELNQKGYDVKSDVWSLG-ITMIELATGRFPYDSW-KTPFQQL 217
Query: 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
K+V+ + P S +DFV K L K+ + R + L HP+
Sbjct: 218 KQVVEEPSP--QLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL 266
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 76.7 bits (188), Expect = 1e-14
Identities = 84/314 (26%), Positives = 131/314 (41%), Gaps = 60/314 (19%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDVKREVKILQ 151
Y + K +G+G+FG ++ K + K I E+ K L I V +V RE+K
Sbjct: 15 YEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEV-NVMRELK--- 70
Query: 152 ALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILA--KMISTTLTSAWFLAIRK 207
H+N+V++ + F + + +YI ME C+ G+L I KM
Sbjct: 71 ----HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFG------------- 113
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHL-------HGLVHRDMKPENFLF--------KSAKE 252
+ E + RQ+L A CH ++HRD+KP+N K +
Sbjct: 114 --KIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171
Query: 253 DSSL------KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGP---ESDVWSIGV 303
++L K DFGLS I VG+ YY +PE+L ++ +SD+W++G
Sbjct: 172 ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGC 231
Query: 304 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
I Y L G+ PF L+ PD P S +K LL + R +
Sbjct: 232 IIYELCSGKTPFHKANNFSQLISELKRGPDL---PIKGKSKELNILIKNLLNLSAKERPS 288
Query: 364 AAQALSHPWVREGG 377
A Q L + ++ G
Sbjct: 289 ALQCLGYQIIKNVG 302
|
Length = 1021 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 2e-14
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 41/241 (17%)
Query: 99 TIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
T K LG GQFG V K G VA+K I + M + +D E K++ L+ H
Sbjct: 7 TFLKELGSGQFGV--VHLGKWRGKIDVAIKMIREGAM----SEDDFIEEAKVMMKLS-HP 59
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+V+ Y ++I E G LL+ + + L + W L + D
Sbjct: 60 NLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRER--KGKLGTEWLLDMCSD--------- 108
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPG 270
V M + + +G +HRD+ N L ED+ +K +DFGL+ ++ G
Sbjct: 109 -VCEAMEYLES----NGFIHRDLAARNCL---VGEDNVVKVSDFGLARYVLDDQYTSSQG 160
Query: 271 KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVL 328
KF + PEV + +SDVWS GV+ + + G+ P+ + + + V
Sbjct: 161 TKF-----PVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS 215
Query: 329 R 329
Sbjct: 216 A 216
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 2e-14
Identities = 67/290 (23%), Positives = 130/290 (44%), Gaps = 41/290 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+++G G + + K A+K I+K + ++ V+ E + + + H +V
Sbjct: 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVG 60
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
++ F+ ++ ++ +E GG+L+ +++ + E+ A
Sbjct: 61 LHSCFQTESRLFFVIEFVSGGDLM-----------------FHMQRQRKLPEEHARFYSA 103
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 280
++ H G+++RD+K +N L + + +K TD+G+ + I+PG G+
Sbjct: 104 EISLALNFLHERGIIYRDLKLDNVLLDA---EGHIKLTDYGMCKEGIRPGDTTSTFCGTP 160
Query: 281 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLRN 330
Y+APE+L+ + G D W++GV+ + ++ GR PF TED +F+ +L
Sbjct: 161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK 220
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 374
+ R S+S A +K L KDP+ RL SHP+ R
Sbjct: 221 QIRIPR----SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 3e-14
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 397 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
K S L F + L +E++ +L++ F D D +G I E+ + L + L + E+
Sbjct: 4 KISDLLTF------TQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKIL-RSLGFNPSEA 56
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAA-TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 515
+ ++ + ID + VDF EF+ ++ + + ++ + + AF+ FD D DG+I
Sbjct: 57 EINKLFEEIDAGNET-VDFPEFLTVMSVKLKRGDKEEELRE------AFKLFDKDHDGYI 109
Query: 516 TPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRL 553
+ ELR G ++ LL+E D D DG I EF++L
Sbjct: 110 SIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKL 153
|
Length = 160 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 3e-14
Identities = 64/288 (22%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQAL 153
Y +++G G +G + + +G + +KK+ L A ++ E ++L L
Sbjct: 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLN-----LRNASRRERKAAEQEAQLLSQL 56
Query: 154 AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRI---LAKMISTTLTSAWFLAIRKDS 209
H N+V + ++E +D +YI M CEGG+L ++ K++ WF+ I
Sbjct: 57 K-HPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMAL 115
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIK 268
+Y H ++HRD+K +N FL ++ + +K D G++ ++
Sbjct: 116 QYL------------------HEKHILHRDLKTQNVFLTRT----NIIKVGDLGIARVLE 153
Query: 269 PGKKFQD-IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
++G+ YY++PE+ K +SDVW++G Y + + F K + +
Sbjct: 154 NQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYR 213
Query: 327 VLRNK-PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
++ K P + P + + + +L K P R + L P++
Sbjct: 214 IIEGKLPPMPKDYSPELG----ELIATMLSKRPEKRPSVKSILRQPYI 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 4e-14
Identities = 82/314 (26%), Positives = 121/314 (38%), Gaps = 81/314 (25%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK----REVKILQALAGHENV 159
LG G + Y K G VA+K+I E RE +L+ L H N+
Sbjct: 13 LGEGSYATVYKGRSKLTGQLVALKEIRLE------HEEGAPFTAIREASLLKDLK-HANI 65
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD-SRYTEKDAAV 218
V L D I K TLT F + D +Y +
Sbjct: 66 VT----------------------LHDIIHTK---KTLTLV-FEYLDTDLKQYMDDCGGG 99
Query: 219 V----VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-P 269
+ VR Q+LR A CH ++HRD+KP+N L E LK DFGL+ P
Sbjct: 100 LSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE---LKLADFGLARAKSVP 156
Query: 270 GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-----DG 322
K + + V + +Y P+VL + D+W +G I Y + GR F T+
Sbjct: 157 SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHK 216
Query: 323 IFK-----------EVLRNK-------PDFRRKP----WPSIS--NSAKDFVKKLLVKDP 358
IF+ V N P + +P P + ++ K L +P
Sbjct: 217 IFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEP 276
Query: 359 RARLTAAQALSHPW 372
+ R++AA+A+ HP+
Sbjct: 277 KKRISAAEAMKHPY 290
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 5e-14
Identities = 80/303 (26%), Positives = 114/303 (37%), Gaps = 74/303 (24%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---DVKREVKILQALAGHENVV 160
LGHG G Y A +AVK I L I VE + E++IL ++
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVKVIP-----LDITVELQKQIMSELEILYKCDS-PYII 62
Query: 161 KFYNAFEDDNYVYIAMELCEGGEL----------LDRILAKMISTTLTSAWFLAIRKDSR 210
FY AF +N + I E +GG L L RI A + LT W L I
Sbjct: 63 GFYGAFFVENRISICTEFMDGGSLDVYRKIPEHVLGRI-AVAVVKGLTYLWSLKI----- 116
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--K 268
+HRD+KP N L + + +K DFG+S +
Sbjct: 117 -------------------------LHRDVKPSNMLVNTRGQ---VKLCDFGVSTQLVNS 148
Query: 269 PGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
K + VG+ Y+APE + + G SDVWS+G+ L GR P+ I K
Sbjct: 149 IAKTY---VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ-----IQKNQ 200
Query: 328 LRNKP----------DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377
P D P S F+ + + K P+ R + HP++ +
Sbjct: 201 GSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260
Query: 378 DAS 380
D +
Sbjct: 261 DGN 263
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 72.3 bits (177), Expect = 7e-14
Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 56/306 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG G + Y K + VA+K+I E + A+ REV +L+ L H N+V
Sbjct: 14 LGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAI----REVSLLKDLK-HANIVT 68
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
++ + + + E LD+ L + + S ++ + +
Sbjct: 69 LHDIIHTEKSLTLVFEY------LDKDLKQYLDDCGNSINMHNVK-----------LFLF 111
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 280
Q+LR CH ++HRD+KP+N L E LK DFGL+ P K + + V +
Sbjct: 112 QLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYSNEVVTL 168
Query: 281 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------- 329
+Y P++L + D+W +G I Y + GR F T + + R
Sbjct: 169 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEET 228
Query: 330 -------------NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
N P +R P + + + + KLL + R R++A +A+ HP+
Sbjct: 229 WPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288
Query: 373 VREGGD 378
G+
Sbjct: 289 FHCLGE 294
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 71.6 bits (175), Expect = 1e-13
Identities = 82/308 (26%), Positives = 133/308 (43%), Gaps = 66/308 (21%)
Query: 104 LGHGQFGYTYVATDKANGDR-VAVKKI--EKNKMILPIAVEDVKREVKILQALAG--HEN 158
+G G +G + A D NG R VA+K++ + + +P++ REV +L+ L H N
Sbjct: 9 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST---IREVAVLRHLETFEHPN 65
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK--DA 216
VV+ + ++C DR T LT + + + Y +K +
Sbjct: 66 VVRLF-------------DVCTVSRT-DR------ETKLTLVFEHVDQDLTTYLDKVPEP 105
Query: 217 AV-------VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
V ++ Q+LR H H +VHRD+KP+N L S+ + +K DFGL+
Sbjct: 106 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSF 162
Query: 270 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED-----GI 323
+V + +Y APEVL + S D+WS+G I + + R+P + + D I
Sbjct: 163 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKI 221
Query: 324 F------------KEVLRNKPDFRRKPW-------PSISNSAKDFVKKLLVKDPRARLTA 364
++V + F K I KD + K L +P R++A
Sbjct: 222 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 281
Query: 365 AQALSHPW 372
ALSHP+
Sbjct: 282 YSALSHPY 289
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 3e-13
Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 57/319 (17%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG G + + K + VA+K+I E + A+ REV +L+ L H N+V
Sbjct: 14 LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAI----REVSLLKDLK-HANIVT 68
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
++ D + + E LD+ L + + + + + + +
Sbjct: 69 LHDIVHTDKSLTLVFEY------LDKDLKQYMDDC-----------GNIMSMHNVKIFLY 111
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 280
Q+LR A CH ++HRD+KP+N L E LK DFGL+ P K + + V +
Sbjct: 112 QILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPTKTYSNEVVTL 168
Query: 281 YYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------- 329
+Y P+VL S + D+W +G I + + GR F T + + R
Sbjct: 169 WYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEET 228
Query: 330 -------------NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
N P ++ +P P + + + K L + + R++A +A+ H +
Sbjct: 229 WPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAY 288
Query: 373 VRE-GGDASEIPIDISVLN 390
R G +P IS+ +
Sbjct: 289 FRSLGTRIHSLPESISIFS 307
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 69.7 bits (170), Expect = 4e-13
Identities = 72/301 (23%), Positives = 121/301 (40%), Gaps = 58/301 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG G + + K + VA+K+I E + A+ REV +L+ L H N+V
Sbjct: 13 LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAI----REVSLLKNLK-HANIVT 67
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
++ + + + E LD L + + + + + + +
Sbjct: 68 LHDIIHTERCLTLVFEY------LDSDLKQYLDNC-----------GNLMSMHNVKIFMF 110
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 280
Q+LR + CH ++HRD+KP+N L E LK DFGL+ P K + + V +
Sbjct: 111 QLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPTKTYSNEVVTL 167
Query: 281 YYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-------- 329
+Y P+VL S P D+W +G I Y + GR F T + R
Sbjct: 168 WYRPPDVLLGSTEYSTP-IDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEE 226
Query: 330 --------------NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
P +R +P P + D + LL+ + ++R++A AL H
Sbjct: 227 TWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHS 286
Query: 372 W 372
+
Sbjct: 287 Y 287
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 68.7 bits (168), Expect = 8e-13
Identities = 69/244 (28%), Positives = 95/244 (38%), Gaps = 60/244 (24%)
Query: 102 KLLGHGQFGYTYVAT------DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
LG G FG Y T + RVAVK + K A + K+E L
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG------ATDQEKKEFLKEAHLMS 54
Query: 156 ---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+VK + YI MEL EGG+LL ++ R +
Sbjct: 55 NFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLL--------------SYLRDARVERFGP 100
Query: 213 EKDAAVVVRQM-LRVAAECH----LHGLVHRDMKPENFLFKSAKEDSS--LKATDFGLSD 265
+ + L VA C +H +HRD+ N L D+ +K DFGL+
Sbjct: 101 PLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLA- 158
Query: 266 FIKPGKKFQDIVGSAYY------------VAPEVL-KRKSGPESDVWSIGVITY-ILLCG 311
+DI S YY +APE L K +SDVWS GV+ + IL G
Sbjct: 159 --------RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLG 210
Query: 312 RRPF 315
++P+
Sbjct: 211 QQPY 214
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 1e-12
Identities = 65/241 (26%), Positives = 89/241 (36%), Gaps = 51/241 (21%)
Query: 95 DRRYTIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
R K LG G FG Y G++VAVK + N D +RE++IL
Sbjct: 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSL--NHSGEEQHRSDFEREIEIL 60
Query: 151 QALAGHENVVKFYNAFEDD--NYVYIAMELCEGGELLD--RILAKMISTTLTSAWFLAIR 206
+ L HEN+VK+ E + + ME G L D + I+ + I
Sbjct: 61 RTLD-HENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQIC 119
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
K Y +HRD+ N L +S + +K +DFGL+
Sbjct: 120 KGMDYLGS------------------QRYIHRDLAARNILVES---EDLVKISDFGLAKV 158
Query: 267 IKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITYILLCGRRP 314
+ K + YYV APE L+ K SDVWS GV Y L P
Sbjct: 159 LPEDKDY-------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDP 211
Query: 315 F 315
Sbjct: 212 S 212
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 1e-12
Identities = 63/228 (27%), Positives = 95/228 (41%), Gaps = 36/228 (15%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
F +RY ++LG G FG Y Y + G+ VAVK +++ K+E+
Sbjct: 1 FHKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEIN 58
Query: 149 ILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
IL+ L HEN+VK+ + + + ME G L D + ++ L A
Sbjct: 59 ILKTLY-HENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLN--LAQLLLFA-- 113
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+Q+ A H +HRD+ N L + D +K DFGL+
Sbjct: 114 --------------QQICEGMAYLHSQHYIHRDLAARNVLLDN---DRLVKIGDFGLAKA 156
Query: 267 IKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 309
+ G ++ +D ++ A E LK K SDVWS GV Y LL
Sbjct: 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELL 204
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 2e-12
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K + G FG Y+ K N AVK ++K MI V V+ E L AL+
Sbjct: 6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDAL-ALSKSP 64
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V Y + + N VY+ ME GG++ L I Y +++ A
Sbjct: 65 FIVHLYYSLQSANNVYLVMEYLIGGDVKS---------------LLHIYG---YFDEEMA 106
Query: 218 V-VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
V + ++ H HG++HRD+KP+N L + + +K TDFGLS
Sbjct: 107 VKYISEVALALDYLHRHGIIHRDLKPDNMLISN---EGHIKLTDFGLS 151
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 2e-12
Identities = 84/335 (25%), Positives = 133/335 (39%), Gaps = 71/335 (21%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 4 DDDFEKISE----LGAGNGGVVFKVSHKPSGLIMARKLIHLE--IKPAIRNQIIRELQVL 57
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+V FY AF D + I ME +GG LD++L K A R +
Sbjct: 58 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVLKK------------AGRIPEQ 103
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
K + V++ + + + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 104 ILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDS 157
Query: 271 KKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP------------FWD 317
VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 158 MA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGC 216
Query: 318 KTEDGIFKEVLRNKPDFRRKP----------------------------WPSISNSA--K 347
E + +P +P PS A +
Sbjct: 217 PVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQ 276
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
DFV K L+K+P R Q + H +++ +A E+
Sbjct: 277 DFVNKCLIKNPAERADLKQLMVHAFIKR-SEAEEV 310
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 4e-12
Identities = 68/256 (26%), Positives = 103/256 (40%), Gaps = 56/256 (21%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+ LG GQFG + N VAVK ++ M +D E +I++ L H +++
Sbjct: 12 RKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLR-HPKLIQ 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y + +YI EL + G LL+ +L A+ +
Sbjct: 66 LYAVCTLEEPIYIVTELMKYGSLLE---------------YLQ-------GGAGRALKLP 103
Query: 222 QMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK------ 268
Q++ +AA+ +HRD+ N L E++ K DFGL+ IK
Sbjct: 104 QLIDMAAQVASGMAYLEAQNYIHRDLAARNVL---VGENNICKVADFGLARVIKEDIYEA 160
Query: 269 -PGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFK 325
G KF + APE L + +SDVWS G+ +T I+ GR P+ T
Sbjct: 161 REGAKF-----PIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN----A 211
Query: 326 EVLRNKPDFRRKPWPS 341
EVL+ R P P
Sbjct: 212 EVLQQVDQGYRMPCPP 227
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 4e-12
Identities = 58/231 (25%), Positives = 86/231 (37%), Gaps = 53/231 (22%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG--- 155
+G +G G+FG + + G +VAVK + K + QA
Sbjct: 9 KLGATIGKGEFGDVMLGDYR--GQKVAVKCL--------------KDDSTAAQAFLAEAS 52
Query: 156 ------HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
H N+V+ N +YI E G L+D +L R +
Sbjct: 53 VMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVD---------------YLRSRGRA 97
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
T + +L VHRD+ N L ED K +DFGL+
Sbjct: 98 VITLAQQLGFALDV--CEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLA--- 149
Query: 268 KPGKKFQDIVG-SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
K + QD + APE L+ +K +SDVWS G++ + I GR P+
Sbjct: 150 KEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 5e-12
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 35/237 (14%)
Query: 99 TIGKLLGHGQFGYTYVAT-DKANGDRVAVK-KIEKNKMILPIAVEDVKREVKILQALAGH 156
T+G+ +G GQFG Y +++AV K KN + E +E I++ H
Sbjct: 9 TLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVR-EKFLQEAYIMRQF-DH 66
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
++VK ++ V+I MEL GEL +L + K S D
Sbjct: 67 PHIVKLIGVITENP-VWIVMELAPLGELRS---------------YLQVNKYSL----DL 106
Query: 217 AVVVRQMLRVA-AECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
A ++ +++ A +L VHRD+ N L S +K DFGLS +++ +
Sbjct: 107 ASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD---CVKLGDFGLSRYLEDESYY 163
Query: 274 QDIVGS--AYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF-WDKTEDGIFK 325
+ G ++APE + R+ SDVW GV + IL+ G +PF K D I +
Sbjct: 164 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR 220
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 5e-12
Identities = 76/291 (26%), Positives = 120/291 (41%), Gaps = 49/291 (16%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPIAVEDVKREVKILQALAGHE 157
+G G FG K +G +AVK+I EK + L + ++ V R
Sbjct: 11 EIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDC-------P 63
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE---- 213
+VKFY A + +I MEL +D L K ++ S E
Sbjct: 64 YIVKFYGALFREGDCWICMEL------MDISLDKFYK-------YVYEVLKSVIPEEILG 110
Query: 214 KDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
K A V+ A +L ++HRD+KP N L + ++K DFG+S +
Sbjct: 111 KIAVATVK------ALNYLKEELKIIHRDVKPSNILLD---RNGNIKLCDFGISGQLVDS 161
Query: 270 GKKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPF--WDKTEDGI 323
K +D G Y+APE + + SDVWS+G+ Y + G+ P+ W+ D +
Sbjct: 162 IAKTRD-AGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQL 220
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ V + P S S +F+ L+KD R + L HP+++
Sbjct: 221 TQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIK 271
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 5e-12
Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 59/243 (24%)
Query: 104 LGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++ + + + VAVK +++ A +D +RE ++L HEN
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKE--TASNDARKDFEREAELLTNF-QHEN 69
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLD---------RILAKMISTT--LTSAWFLAIRK 207
+VKFY + + + E E G+L L S LT + L I
Sbjct: 70 IVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQI-- 127
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
AV + + A H VHRD+ N L D +K DFG+S
Sbjct: 128 ---------AVQIASGMVYLASQHF---VHRDLATRNCL---VGYDLVVKIGDFGMS--- 169
Query: 268 KPGKKFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRR 313
+D+ + YY + PE ++ RK ESDVWS GV+ + I G++
Sbjct: 170 ------RDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQ 223
Query: 314 PFW 316
P++
Sbjct: 224 PWY 226
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 65.7 bits (160), Expect = 5e-12
Identities = 53/229 (23%), Positives = 102/229 (44%), Gaps = 31/229 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ +VA+K I + M + ED E +++ L+ H +V+ Y
Sbjct: 12 IGSGQFGLVWLGY-WLEKRKVAIKTIREGAM----SEEDFIEEAQVMMKLS-HPKLVQLY 65
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ + + + E E G L D + A+ + L + D V M
Sbjct: 66 GVCTERSPICLVFEFMEHGCLSDYLRAQ--RGKFSQETLLGMCLD----------VCEGM 113
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 283
+ + ++HRD+ N L E+ +K +DFG++ F+ ++ G+ + V
Sbjct: 114 AYLESSN----VIHRDLAARNCL---VGENQVVKVSDFGMTRFVL-DDQYTSSTGTKFPV 165
Query: 284 ---APEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327
+PEV K +SDVWS GV+ + + G+ P+ +++ + + +
Sbjct: 166 KWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETI 214
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 65.5 bits (160), Expect = 8e-12
Identities = 61/228 (26%), Positives = 94/228 (41%), Gaps = 38/228 (16%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
K+LG G FG Y G++ VA+K + + P A +++ E ++ A
Sbjct: 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVM-ASVD 67
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRI---LAKMISTTLTSAWFLAIRKDSRYT 212
H +VV+ I +L G LLD + + S L + W + I K Y
Sbjct: 68 HPHVVRLLGICLSSQVQLIT-QLMPLGCLLDYVRNHKDNIGSQYLLN-WCVQIAKGMSYL 125
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E+ LVHRD+ N L K+ +K TDFGL+ + +K
Sbjct: 126 EE------------------KRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLDVDEK 164
Query: 273 FQDIVGSAY---YVAPE-VLKRKSGPESDVWSIGVITYILLC-GRRPF 315
G ++A E +L R +SDVWS GV + L+ G +P+
Sbjct: 165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPY 212
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 65.8 bits (161), Expect = 1e-11
Identities = 66/327 (20%), Positives = 113/327 (34%), Gaps = 87/327 (26%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA----- 152
IGK + +A K VAVKKI + K ++K+LQ
Sbjct: 4 TLIGKCFEDLMIVH--LAKHKPTNTLVAVKKINLDSC--------SKEDLKLLQQEIITS 53
Query: 153 -LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
H N++ + +F D+ +Y+ L G D + + +
Sbjct: 54 RQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL-------------------KTHF 94
Query: 212 TEKDAAVVVRQMLR--VAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 264
E + + +L+ + A ++H G +HR +K + L K GL
Sbjct: 95 PEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILL-----SGDGKVVLSGLRYSV 149
Query: 265 DFIKPGKKFQDIVGSA-------YYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRP 314
IK GK+ + + +++PEVL+ + +SD++S+G+ L G P
Sbjct: 150 SMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVP 209
Query: 315 FWDK------TED-----------GIFKEVLRNKPDFRRK---PWPSISNSAK------- 347
F D E + + R P S
Sbjct: 210 FKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSE 269
Query: 348 ---DFVKKLLVKDPRARLTAAQALSHP 371
FV+ L +DP +R +A+Q L+H
Sbjct: 270 HFHQFVELCLQRDPESRPSASQLLNHS 296
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 1e-11
Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF+R LG G G K +G +A K I I P + RE+++L
Sbjct: 4 DDDFERISE----LGAGNGGVVTKVQHKPSGLIMARKLIHLE--IKPAIRNQIIRELQVL 57
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL--AKMISTTLTSAWFLAIRKD 208
+V FY AF D + I ME +GG LD++L AK I + +A+ +
Sbjct: 58 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVLKEAKRIPEEILGKVSIAVLRG 115
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
Y + H ++HRD+KP N L S E +K DFG+S +
Sbjct: 116 LAYLREK-----------------HQIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI 155
Query: 269 PGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP 314
VG+ Y++PE L+ +SD+WS+G+ L GR P
Sbjct: 156 DSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYP 201
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 2e-11
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ T K LG GQFG + D VA+K I++ M + ++ E K++ L+
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMKLS- 57
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
HE +V+ Y +YI E G LL+ + + + L + KD
Sbjct: 58 HEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYL--REHGKRFQPSQLLEMCKD------- 108
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
V M A +HRD+ N L +K +DFGLS ++ ++
Sbjct: 109 ---VCEGM----AYLESKQFIHRDLAARNCLVDD---QGCVKVSDFGLSRYVL-DDEYTS 157
Query: 276 IVGSAYYV---APEVLKR-KSGPESDVWSIGVITY-ILLCGRRPF 315
VGS + V PEVL K +SDVW+ GV+ + + G+ P+
Sbjct: 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPY 202
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 3e-11
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 479
+LR+ F D D +G+IS +E++ AL K L L E + E+++ +D + DG +DF EF+
Sbjct: 1 ELREAFRLFDKDGDGTISADELKAAL-KSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFL 59
Query: 480 AA 481
Sbjct: 60 EL 61
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 65.1 bits (158), Expect = 4e-11
Identities = 82/367 (22%), Positives = 157/367 (42%), Gaps = 54/367 (14%)
Query: 64 KTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR 123
K + +++++ K D ++ ++ Y +G ++G+G FG Y A ++
Sbjct: 34 KLDEEERSHNNNAGEDEDEEKMIDNDINRSPNKSYKLGNIIGNGSFGVVYEAICIDTSEK 93
Query: 124 VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183
VA+KK+ ++ + RE+ I++ L H N++ F D Y + E
Sbjct: 94 VAIKKVLQDP-------QYKNRELLIMKNL-NHINII-----FLKDYYYTECFKKNEKNI 140
Query: 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRD 239
L+ ++ + I T+ ++ +R +V+ Q+ R A H + HRD
Sbjct: 141 FLN-VVMEFIPQTVHKY----MKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRD 195
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--D 297
+KP+N L +LK DFG + + G++ + S +Y APE++ + + D
Sbjct: 196 LKPQNLLIDP--NTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHID 253
Query: 298 VWSIGVITYILLCGRRPFWDK----------------TEDGIFKEVLRNKPDFR------ 335
+WS+G I ++ G F + TED + KE+ N D +
Sbjct: 254 LWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL-KEMNPNYADIKFPDVKP 312
Query: 336 ---RKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS-EIPIDISVLN 390
+K +P + A +F+ + L +P RL +AL+ P+ + D ++P I L
Sbjct: 313 KDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDPCIKLPKYIDKLP 372
Query: 391 NMRQFVK 397
++ F
Sbjct: 373 DLFNFCD 379
|
Length = 440 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 6e-11
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 554
+ AF FD D DG I+ +EL+ G ID ++ E D D DG+I EF L+
Sbjct: 3 REAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62
Query: 555 R 555
Sbjct: 63 A 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 6e-11
Identities = 65/249 (26%), Positives = 96/249 (38%), Gaps = 54/249 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
TI K++G G+FG K G + VA+K + +K ++ D E I+
Sbjct: 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRL-------DFLTEASIM 59
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H N+++ V I E E G L D
Sbjct: 60 GQFD-HPNIIRLEGVVTKSRPVMIITEYMENGSL-----------------------DKF 95
Query: 211 YTEKDAAVVVRQ---MLR-VAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
E D V Q MLR +A+ VHRD+ N L S + K +DFGL
Sbjct: 96 LRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS---NLVCKVSDFGL 152
Query: 264 SDFIKPGKKFQDIVG---SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 318
S ++ + G + APE + RK SDVWS G++ + ++ G RP+WD
Sbjct: 153 SRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM 212
Query: 319 TEDGIFKEV 327
+ + K V
Sbjct: 213 SNQDVIKAV 221
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 6e-11
Identities = 80/300 (26%), Positives = 119/300 (39%), Gaps = 47/300 (15%)
Query: 86 TDFGYDK--DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED 142
T YD +F R + GK LG G FG AT AV K+ KM+ P A
Sbjct: 22 TQLPYDLKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAV-KMLKPTAHSS 80
Query: 143 VKR----EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLT 198
+ E+KI+ L HEN+V A + + E C G+LL+
Sbjct: 81 EREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLN------------ 128
Query: 199 SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258
FL +++S T +D Q+ + A +HRD+ N L K +K
Sbjct: 129 ---FLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK---IVKI 182
Query: 259 TDFGLSDFIKPGKKFQDIV-GSAY----YVAPE-VLKRKSGPESDVWSIGVITY-ILLCG 311
DFGL+ I + +V G+A ++APE + ESDVWS G++ + I G
Sbjct: 183 CDFGLARDIMNDSNY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLG 240
Query: 312 RRPFWDKTEDGIFKEVLRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 366
P+ D F ++++ +P+ I + D DP R T Q
Sbjct: 241 SNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDA-------DPLKRPTFKQ 293
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 7e-11
Identities = 54/219 (24%), Positives = 83/219 (37%), Gaps = 48/219 (21%)
Query: 102 KLLGHGQFGYTYVAT-DKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
K LG G FG + G VAVK ++ +K L ++D +E I+ +L HEN
Sbjct: 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDK--LSDIMDDFLKEAAIMHSLD-HEN 57
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRI-LAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+++ Y + + EL G LLDR+ + +++ A+
Sbjct: 58 LIRLYGVVLTHPLMMVT-ELAPLGSLLDRLRKDALGHFLISTLCDYAV------------ 104
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
Q+ +HRD+ N L S + +K DFGL + +
Sbjct: 105 ----QIANGMRYLESKRFIHRDLAARNILLASDDK---VKIGDFGLMRALPQNED----- 152
Query: 278 GSAYYV------------APEVLK-RKSGPESDVWSIGV 303
+YV APE L+ R SDVW GV
Sbjct: 153 ---HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGV 188
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 7e-11
Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +++ ++R+ FD D D +G+I +E++ A+ + L ++ K+ + +++ +D + G
Sbjct: 11 LTEDQKKEIREAFDLFDTDGSGTIDPKELKVAM-RSLGFEPKKEEIKQMIADVDKDGSGK 69
Query: 473 VDFSEFV-AATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL-RMHTGLKGSI 530
+DF EF+ T + E D + L+ AF FD D+ G I+ + L R+ L +I
Sbjct: 70 IDFEEFLDIMTKKLG---ERDPREEILK---AFRLFDDDKTGKISLKNLKRVAKELGETI 123
Query: 531 D-----PLLEEADIDKDGRISLSEFRRLLRTASIS 560
+++EAD + DG IS EF R+++ ++
Sbjct: 124 TDEELQEMIDEADRNGDGEISEEEFYRIMKKTNLF 158
|
Length = 158 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 61.9 bits (150), Expect = 1e-10
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+G+++G G+FG V + G +VAVK I+ + + + E ++ L H+N
Sbjct: 9 TLGEIIGEGEFGA--VLQGEYTGQKVAVKNIKCD-----VTAQAFLEETAVMTKLH-HKN 60
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ N +YI MEL G L++ FL R A V
Sbjct: 61 LVRLLGVILH-NGLYIVMELMSKGNLVN---------------FLRTRGR-------ALV 97
Query: 219 VVRQMLRVAAEC-----HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
V Q+L+ + + +L LVHRD+ N L ED K +DFGL+ + G
Sbjct: 98 SVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNIL---VSEDGVAKVSDFGLA---RVGS 151
Query: 272 KFQDIVG-SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
D + APE LK +K +SDVWS GV+ + + GR P+
Sbjct: 152 MGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPY 198
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 1e-10
Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 23/258 (8%)
Query: 80 IPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVA----TDKANGDR---VAVKKIEKN 132
+P R +F DK T+GK LG G FG +A DK VAVK ++ +
Sbjct: 4 LPEDPRWEFSRDK-----LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD 58
Query: 133 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKM 192
++ D+ E+++++ + H+N++ A D +Y+ +E G L + + A+
Sbjct: 59 ATEKDLS--DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 116
Query: 193 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252
+ ++ +A D + T KD Q+ R +HRD+ N L E
Sbjct: 117 -PPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVL---VTE 172
Query: 253 DSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-I 307
++ +K DFGL+ + I KK + ++APE L R +SDVWS GV+ + I
Sbjct: 173 NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 232
Query: 308 LLCGRRPFWDKTEDGIFK 325
G P+ + +FK
Sbjct: 233 FTLGGSPYPGIPVEELFK 250
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 61.9 bits (150), Expect = 2e-10
Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 42/234 (17%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKR 145
++K F +R + LG G FG + GD VAVK ++ IA D+K+
Sbjct: 1 FEKRFLKRI---RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKK 55
Query: 146 EVKILQALAGHENVVKFYNAFEDD--NYVYIAMELCEGG---ELLDRILAKMISTTLTSA 200
E++IL+ L HEN+VK+ +D N + + ME G E L R K
Sbjct: 56 EIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNK--------- 105
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
+ +++ +Y A + + M + + + VHRD+ N L +S + +K D
Sbjct: 106 --INLKQQLKY----AVQICKGMDYLGSRQY----VHRDLAARNVLVES---EHQVKIGD 152
Query: 261 FGLSDFIKPGKKF----QDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 309
FGL+ I+ K++ D+ ++ APE L + K SDVWS GV Y LL
Sbjct: 153 FGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELL 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 65/254 (25%), Positives = 106/254 (41%), Gaps = 44/254 (17%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+T+ + LG G FG + K N RVA+K ++ + ++ +D ++EV+ L+ L H+
Sbjct: 8 FTLERKLGSGYFGEVWEGLWK-NRVRVAIKILKSDDLL---KQQDFQKEVQALKRLR-HK 62
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+++ + VYI EL E G LL L L A + + A
Sbjct: 63 HLISLFAVCSVGEPVYIITELMEKGSLLA-FLRSPEGQVLPVASLIDM----------AC 111
Query: 218 VVVRQMLRVAAECHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
V M +L +HRD+ N L ED K DFGL+ IK +D
Sbjct: 112 QVAEGM------AYLEEQNSIHRDLAARNIL---VGEDLVCKVADFGLARLIK-----ED 157
Query: 276 IVGSA------YYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 327
+ S+ + APE +SDVWS G++ Y + G+ P+ ++ ++
Sbjct: 158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI 217
Query: 328 LRNKPDFRRKPWPS 341
R P P+
Sbjct: 218 TAG----YRMPCPA 227
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 2e-10
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 69/308 (22%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG G + Y K NG VA+K ++++ + A+ RE +L+ L H N+V
Sbjct: 13 LGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAI----REASLLKGLK-HANIVL 67
Query: 162 FYNAFEDDN-----YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
++ + Y+ +LC+ +D+ + ++
Sbjct: 68 LHDIIHTKETLTLVFEYVHTDLCQ---YMDKHPGGL-------------------HPENV 105
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQD 275
+ + Q+LR + H ++HRD+KP+N L E LK DFGL+ P + +
Sbjct: 106 KLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGE---LKLADFGLARAKSVPSHTYSN 162
Query: 276 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF--WDKTEDGIFKEVL--- 328
V + +Y P+VL + + D+W +G I ++ G F +D + + L
Sbjct: 163 EVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLG 222
Query: 329 ----------RNKPDFR------------RKPWPSIS--NSAKDFVKKLLVKDPRARLTA 364
+ P F+ R+ W +S N A+D KLL P+ RL+A
Sbjct: 223 TPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSA 282
Query: 365 AQALSHPW 372
ALSH +
Sbjct: 283 QAALSHEY 290
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 4e-10
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 51/239 (21%)
Query: 104 LGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK + K A +D +RE ++L L H++
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL---KEASESARQDFQREAELLTVLQ-HQH 68
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+FY + + + E G+L + + + A LA +D + +
Sbjct: 69 IVRFYGVCTEGRPLLMVFEYMRHGDL-----NRFLRSHGPDAKILAGGEDVAPGQ----L 119
Query: 219 VVRQMLRVAAE-----CHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+ QML +A++ +L L VHRD+ N L + +K DFG+S
Sbjct: 120 TLGQMLAIASQIASGMVYLASLHFVHRDLATRNCL---VGQGLVVKIGDFGMS------- 169
Query: 272 KFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 316
+DI + YY + PE +L RK ESD+WS GV+ + I G++P++
Sbjct: 170 --RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWY 226
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 4e-10
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 14 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ YI E G LLD + ++ E +A V++
Sbjct: 69 GVCTREPPFYIITEFMTYGNLLDYL------------------RECNRQEVNAVVLLYMA 110
Query: 224 LRVA-AECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 280
+++ A +L +HRD+ N L E+ +K DFGLS + G + G+
Sbjct: 111 TQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAK 166
Query: 281 Y---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
+ + APE L K +SDVW+ GV+ + I G P+
Sbjct: 167 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 206
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 4e-10
Identities = 60/252 (23%), Positives = 95/252 (37%), Gaps = 65/252 (25%)
Query: 99 TIGKLLGHGQFGYTYVATDKA-NGDRV--AVKKIEKNKMILPIAVEDVKREVKILQALAG 155
T+ + LGHG FG Y + +GD V V + D E I+
Sbjct: 9 TLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN- 67
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H+N+V+ + +I +EL GG+L FL R++ E+
Sbjct: 68 HQNIVRLIGVSFERLPRFILLELMAGGDLKS---------------FL--RENRPRPERP 110
Query: 216 AAVVVRQMLR----VAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+++ ++ +L VA C + +HRD+ N L K DFG++
Sbjct: 111 SSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA---- 166
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKSG----------PE----------SDVWSIGVITY-I 307
+DI ++YY RK G PE +DVWS GV+ + I
Sbjct: 167 -----RDIYRASYY-------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEI 214
Query: 308 LLCGRRPFWDKT 319
G P+ +T
Sbjct: 215 FSLGYMPYPGRT 226
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 6e-10
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 20/242 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVE----DVKREVK 148
R +GK LG G FG +A DK +RV + KM+ A E D+ E++
Sbjct: 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAV---KMLKSDATEKDLSDLISEME 75
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
+++ + H+N++ A D +Y+ +E G L + + A+ + + +
Sbjct: 76 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEYCYNPTQVPE 134
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---D 265
+ + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 135 EQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIH 191
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGI 323
I KK + ++APE L R +SDVWS GV+ + I G P+ + +
Sbjct: 192 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251
Query: 324 FK 325
FK
Sbjct: 252 FK 253
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 60.7 bits (147), Expect = 6e-10
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 31/213 (14%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
YT+ K L G G +VAT D V +K +K ++ E +LQ + H
Sbjct: 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLI---------EAMLLQNV-NHP 117
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V++ D V G + +L S T +L ++ A
Sbjct: 118 SVIRM-----KDTLVS--------GAITCMVLPHYSSDLYT---YLT-KRSRPLPIDQAL 160
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
++ +Q+L H ++HRD+K EN + D G + F F +
Sbjct: 161 IIEKQILEGLRYLHAQRIIHRDVKTENIFINDV---DQVCIGDLGAAQFPVVAPAFLGLA 217
Query: 278 GSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 309
G+ APEVL R K ++D+WS G++ + +L
Sbjct: 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250
|
Length = 357 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 6e-10
Identities = 64/222 (28%), Positives = 92/222 (41%), Gaps = 53/222 (23%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAGHE 157
+ +G G FG Y K N + VAVK + LP D+KR E +IL+ H
Sbjct: 1 EKIGKGNFGDVYKGVLKGNTE-VAVKTC---RSTLP---PDLKRKFLQEAEILKQYD-HP 52
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK--- 214
N+VK +YI MEL GG LL FL +K+ +K
Sbjct: 53 NIVKLIGVCVQKQPIYIVMELVPGGSLLT---------------FLRKKKNRLTVKKLLQ 97
Query: 215 ---DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD------ 265
DAA M + ++ +HRD+ N L E++ LK +DFG+S
Sbjct: 98 MSLDAAA---GMEYLESKN----CIHRDLAARNCL---VGENNVLKISDFGMSREEEGGI 147
Query: 266 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITY 306
+ Q + + APE L + ESDVWS G++ +
Sbjct: 148 YTVSDGLKQIPIK---WTAPEALNYGRYTSESDVWSYGILLW 186
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 8e-10
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 73/268 (27%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV-------KR-----E 146
T+ + LG G FG Y K + K + +A++ V +R E
Sbjct: 9 TLIRELGQGSFGMVYEGL---------AKGVVKGEPETRVAIKTVNENASMRERIEFLNE 59
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+++ H +VV+ + MEL G+L + + R
Sbjct: 60 ASVMKEFNCH-HVVRLLGVVSTGQPTLVVMELMAKGDLKS--------------YLRSRR 104
Query: 207 KDSRYTEKDAAVVVRQMLRVAAE-----CHLHGL--VHRDMKPENFLFKSAKEDSSLKAT 259
++ +++ +++AAE +L VHRD+ N + ED ++K
Sbjct: 105 PEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCM---VAEDLTVKIG 161
Query: 260 DFGLSDFIKPGKKFQDIVGSAYY------------VAPEVLKRKSG---PESDVWSIGVI 304
DFG++ +DI + YY +APE LK G +SDVWS GV+
Sbjct: 162 DFGMT---------RDIYETDYYRKGGKGLLPVRWMAPESLK--DGVFTTKSDVWSFGVV 210
Query: 305 TY-ILLCGRRPFWDKTEDGIFKEVLRNK 331
+ + +P+ + + + K V+
Sbjct: 211 LWEMATLAEQPYQGLSNEEVLKFVIDGG 238
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 8e-10
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 50/247 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
R + + LG G FG ++A + + VAVK ++ + A +D +RE ++L
Sbjct: 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA---ARKDFQREAELL 61
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
L HE++VKFY D + + + E + G+L K + A L D +
Sbjct: 62 TNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDL-----NKFLRAHGPDAMILV---DGQ 112
Query: 211 YTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
+ + + QML +A++ +L VHRD+ N L + + +K DFG+
Sbjct: 113 PRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLVKIGDFGM 169
Query: 264 SDFIKPGKKFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILL 309
S +D+ + YY + PE ++ RK ESDVWS GVI + I
Sbjct: 170 S---------RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 220
Query: 310 CGRRPFW 316
G++P++
Sbjct: 221 YGKQPWF 227
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 8e-10
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 47/252 (18%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG ++ +A +VA+K I + M + ED E K++ L+ H
Sbjct: 7 TFMKELGSGQFGVVHLGKWRAQ-IKVAIKAINEGAM----SEEDFIEEAKVMMKLS-HPK 60
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD----SRYTEK 214
+V+ Y +YI E E G LL+ + + L+ L++ +D Y E+
Sbjct: 61 LVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLER 118
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI------- 267
+ +HRD+ N L S +K +DFG++ ++
Sbjct: 119 N------------------SFIHRDLAARNCLVSST---GVVKVSDFGMTRYVLDDEYTS 157
Query: 268 KPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 325
G KF + PEV K +SDVWS GV+ + + G+ PF K+ + +
Sbjct: 158 SSGAKF-----PVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVE 212
Query: 326 EVLRNKPDFRRK 337
+ R +R K
Sbjct: 213 MISRGFRLYRPK 224
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 9e-10
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 39/229 (17%)
Query: 94 FDRRYTIG-KLLGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
F+ R+ + LG G FG Y G+ VAVKK++ + + D +RE++
Sbjct: 1 FEERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIE 57
Query: 149 ILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
IL++L H+N+VK+ Y+A + + ME G L D L K
Sbjct: 58 ILKSLQ-HDNIVKYKGVCYSA--GRRNLRLVMEYLPYGSLRD-YLQKHRE---------- 103
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
R D R A+ + + M + ++ + VHRD+ N L +S ++ +K DFGL+
Sbjct: 104 -RLDHRKLLLYASQICKGMEYLGSKRY----VHRDLATRNILVES---ENRVKIGDFGLT 155
Query: 265 DFIKPGKKFQDIV----GSAYYVAPEVL-KRKSGPESDVWSIGVITYIL 308
+ K++ + ++ APE L + K SDVWS GV+ Y L
Sbjct: 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 204
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 1e-09
Identities = 65/217 (29%), Positives = 96/217 (44%), Gaps = 44/217 (20%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK----REVKILQALAGHE 157
+LLG G FG + T K + VAVK +++ LP +++K E +IL+ H
Sbjct: 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKED---LP---QELKIKFLSEARILKQY-DHP 52
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+VK +YI MEL GG+ L FL +KD T++
Sbjct: 53 NIVKLIGVCTQRQPIYIVMELVPGGDFLS---------------FLRKKKDELKTKQ--- 94
Query: 218 VVVRQMLRVA---AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS----DFIKPG 270
+V+ L A A +HRD+ N L E++ LK +DFG+S D I
Sbjct: 95 -LVKFALDAAAGMAYLESKNCIHRDLAARNCL---VGENNVLKISDFGMSRQEDDGIYSS 150
Query: 271 KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITY 306
+ I + APE L + ESDVWS G++ +
Sbjct: 151 SGLKQI--PIKWTAPEALNYGRYSSESDVWSYGILLW 185
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 1e-09
Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 16/166 (9%)
Query: 216 AAVVVRQMLRV---AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
A R ML+V A H G+VHRD+KP+N + K DFG+ + PG +
Sbjct: 78 AGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLL-PGVR 136
Query: 273 FQD---------IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG 322
D ++G+ Y APE L+ + P SD+++ G+I L G+R +
Sbjct: 137 DADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQRVVQGASVAE 196
Query: 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
I + L + D PW + + ++K L KDPR R +A AL
Sbjct: 197 ILYQQL-SPVDVSLPPWIA-GHPLGQVLRKALNKDPRQRAASAPAL 240
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 1e-09
Identities = 71/291 (24%), Positives = 107/291 (36%), Gaps = 56/291 (19%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I +++G G+FG K G R VA+K ++ E +R+ ++ G
Sbjct: 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG------YTEKQRRDFLSEASIMGQ 61
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N++ V I E E G L DS +
Sbjct: 62 FDHPNIIHLEGVVTKSRPVMIITEFMENGAL-----------------------DSFLRQ 98
Query: 214 KDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
D V Q MLR A + VHRD+ N L S + K +DFGLS F
Sbjct: 99 NDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS---NLVCKVSDFGLSRF 155
Query: 267 IKPGKKFQDIVGS------AYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 318
++ S + APE + RK SDVWS G++ + ++ G RP+WD
Sbjct: 156 LEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 215
Query: 319 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
+ + + + D+R P + + KD AR Q +S
Sbjct: 216 SNQDVINAI---EQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 2e-09
Identities = 83/326 (25%), Positives = 126/326 (38%), Gaps = 69/326 (21%)
Query: 101 GKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
G +G G +G+ Y A K D A+K+IE + + RE+ +L+ L H N
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSAC-----REIALLRELK-HPN 59
Query: 159 VVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
V+ F D V++ + E L +I S A +K +
Sbjct: 60 VIALQKVFLSHSDRKVWLLFDYAEHD------LWHIIKFHRASK---ANKKPMQLPRSMV 110
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----IKPGK 271
++ Q+L H + ++HRD+KP N L E +K D G + +KP
Sbjct: 111 KSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA 170
Query: 272 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR-------------RPFW 316
+V + +Y APE+L R D+W+IG I LL PF
Sbjct: 171 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFH 230
Query: 317 DKTEDGIFK----------EVLRNKP-------DFRRKPWPS-----------ISNSAKD 348
D IF E +R P DFRR + + + +K
Sbjct: 231 HDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKV 290
Query: 349 FV--KKLLVKDPRARLTAAQALSHPW 372
F+ +KLL DP R+T+ QAL P+
Sbjct: 291 FLLLQKLLTMDPTKRITSEQALQDPY 316
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 54/233 (23%)
Query: 100 IGKLLGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+ + LG GQFG ++ T NG +VAVK ++ M + E +E +I++ L H+
Sbjct: 10 LERKLGAGQFGEVWMGT--WNGTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLR-HDK 62
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ Y ++ +YI E G LLD FL + + +
Sbjct: 63 LVQLYAVCSEEEPIYIVTEYMSKGSLLD---------------FLK-------SGEGKKL 100
Query: 219 VVRQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-- 269
+ Q++ +AA+ +HRD+ N L E+ K DFGL+ I+
Sbjct: 101 RLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNIL---VGENLVCKIADFGLARLIEDDE 157
Query: 270 -----GKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 315
G KF + APE + +SDVWS G++ I+ GR P+
Sbjct: 158 YTAREGAKF-----PIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPY 205
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 2e-09
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 19/236 (8%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVA----TDKANGDR---VAVKKIEKNKMILPIAVEDVK 144
+F R R +GK LG G FG A DK+ D+ VAVK ++ N +A D+
Sbjct: 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLA--DLI 65
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E+++++ + H+N++ + +Y+ +E G L + + A+ + +
Sbjct: 66 SEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARR-PPGPDYTFDIT 124
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ + + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 125 KVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL---VTEDNVMKIADFGLA 181
Query: 265 ---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 315
I KK + ++APE L R +SDVWS G++ + I G P+
Sbjct: 182 RGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPY 237
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 2e-09
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 43/248 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++ +VA+K +++ M + E E +++ L H +V+
Sbjct: 12 KKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQ-HPRLVR 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y A +YI E E G L+D FL + + T +
Sbjct: 66 LY-AVVTQEPIYIITEYMENGSLVD---------------FLKTPEGIKLTINKLIDMAA 109
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-------GKKFQ 274
Q+ A +HRD++ N L E K DFGL+ I+ G KF
Sbjct: 110 QIAEGMAFIERKNYIHRDLRAANIL---VSETLCCKIADFGLARLIEDNEYTAREGAKF- 165
Query: 275 DIVGSAYYVAPEVLKRKS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE + + +SDVWS G+ +T I+ GR P+ T EV++N
Sbjct: 166 ----PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN----PEVIQNLE 217
Query: 333 DFRRKPWP 340
R P P
Sbjct: 218 RGYRMPRP 225
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 3e-09
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 38/223 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++ N +VAVK ++ M +V+ E +++ L H+ +V+
Sbjct: 12 KKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQ-HDKLVR 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
Y + +YI E G LLD FL + +
Sbjct: 66 LYAVVTKEEPIYIITEYMAKGSLLD---------------FLKSDEGGKVLLPKLIDFSA 110
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A +HRD++ N L E K DFGL+ I + G KF
Sbjct: 111 QIAEGMAYIERKNYIHRDLRAANVL---VSESLMCKIADFGLARVIEDNEYTAREGAKF- 166
Query: 275 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITY-ILLCGRRPF 315
+ APE + S +SDVWS G++ Y I+ G+ P+
Sbjct: 167 ----PIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPY 205
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 3e-09
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVKILQALAGHENVVKF 162
+G G FG + +A+ VAVK + LP ++ +E +IL+ + H N+V+
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRET---LPPDLKAKFLQEARILKQYS-HPNIVRL 58
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
+YI MEL +GG+ L + T L +++ + E AA
Sbjct: 59 IGVCTQKQPIYIVMELVQGGDFL--------TFLRTEGPRLKVKELIQMVENAAA----G 106
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY- 281
M + ++ +HRD+ N L E + LK +DFG+S ++ +D V ++
Sbjct: 107 MEYLESKH----CIHRDLAARNCL---VTEKNVLKISDFGMS------REEEDGVYASTG 153
Query: 282 --------YVAPEVLKR-KSGPESDVWSIGVITY 306
+ APE L + ESDVWS G++ +
Sbjct: 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLW 187
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 3e-09
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVA------TDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKI 149
R T+GK LG G FG +A DK N VAVK ++ + ++ D+ E+++
Sbjct: 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLS--DLVSEMEM 70
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR-KD 208
++ + H+N++ A D +Y+ +E G L + + A+ S F + +
Sbjct: 71 MKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYS--FDTCKLPE 128
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ T KD Q+ R +HRD+ N L ED+ +K DFGL+ +
Sbjct: 129 EQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVL---VTEDNVMKIADFGLARDVH 185
Query: 269 PGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGI 323
++ ++APE L R +SDVWS GV+ + I G P+ + +
Sbjct: 186 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 245
Query: 324 FK 325
FK
Sbjct: 246 FK 247
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 3e-09
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN---V 159
++G G FG Y G A+K ++K ++ + E + +I+ +L + +
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTGDCPFI 59
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
V AF + + ++L GG+L + + ++EK+
Sbjct: 60 VCMTYAFHTPDKLCFILDLMNGGDL-----------------HYHLSQHGVFSEKEMRFY 102
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 278
+++ H +V+RD+KP N L E ++ +D GL+ DF K KK VG
Sbjct: 103 ATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVG 157
Query: 279 SAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFR 335
+ Y+APEVL++ + +S D +S+G + + LL G PF KT+D E+ R
Sbjct: 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTVN 215
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARL 362
+ S S K ++ LL +D RL
Sbjct: 216 VELPDSFSPELKSLLEGLLQRDVSKRL 242
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 4e-09
Identities = 67/255 (26%), Positives = 99/255 (38%), Gaps = 61/255 (23%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVK 148
I K++G G+FG K G R VA+K + EK + D E
Sbjct: 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQR-------RDFLSEAS 57
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
I+ H N++ V I E E G L D L K D
Sbjct: 58 IMGQF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DAFLRK---------------HD 100
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
++T + + MLR A + G VHRD+ N L S + K +DFGLS
Sbjct: 101 GQFT----VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS---NLVCKVSDFGLS 153
Query: 265 DFIKPGKKFQDIVGSAY----------YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGR 312
+ +D +AY + APE + RK SDVWS G++ + ++ G
Sbjct: 154 ------RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 207
Query: 313 RPFWDKTEDGIFKEV 327
RP+W+ + + K +
Sbjct: 208 RPYWEMSNQDVIKAI 222
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 4e-09
Identities = 62/223 (27%), Positives = 93/223 (41%), Gaps = 39/223 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++AT + +VAVK ++ M +VE E +++ L H+ +VK
Sbjct: 12 KKLGAGQFGEVWMATYNKH-TKVAVKTMKPGSM----SVEAFLAEANVMKTLQ-HDKLVK 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+A +YI E G LLD FL + S+
Sbjct: 66 L-HAVVTKEPIYIITEFMAKGSLLD---------------FLKSDEGSKQPLPKLIDFSA 109
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A +HRD++ N L ++ K DFGL+ I + G KF
Sbjct: 110 QIAEGMAFIEQRNYIHRDLRAANILVSAS---LVCKIADFGLARVIEDNEYTAREGAKF- 165
Query: 275 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPF 315
+ APE + S +SDVWS G+ + I+ GR P+
Sbjct: 166 ----PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 204
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 4e-09
Identities = 68/248 (27%), Positives = 106/248 (42%), Gaps = 45/248 (18%)
Query: 93 DFDR-RYTIGKLLGHGQFGY----TYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKRE 146
+ R R T+GK LG G FG V D N VAVK ++ + ++ D+ E
Sbjct: 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLS--DLVSE 65
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+++++ + H+N++ + +Y+ +E G L D + A+ S
Sbjct: 66 MEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYAS-PDDPRP 124
Query: 207 KDSRYTEKD----AAVVVRQMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261
+ T+KD A V R M +A++ C +HRD+ N L ED +K DF
Sbjct: 125 PEETLTQKDLVSFAYQVARGMEFLASKKC-----IHRDLAARNVL---VTEDHVMKIADF 176
Query: 262 GLSDFIKPGKKFQDIVGSAYY------------VAPEVL-KRKSGPESDVWSIGVITY-I 307
GL+ +DI YY +APE L R +SDVWS GV+ + I
Sbjct: 177 GLA---------RDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEI 227
Query: 308 LLCGRRPF 315
G P+
Sbjct: 228 FTLGGSPY 235
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 6e-09
Identities = 75/308 (24%), Positives = 120/308 (38%), Gaps = 65/308 (21%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK----REVKILQALAGHE 157
+ LG G + Y + NG VA+K I E V RE +L+ L H
Sbjct: 11 EKLGEGSYATVYKGISRINGQLVALKVISMK------TEEGVPFTAIREASLLKGLK-HA 63
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+V ++ + E + T L A ++ + +
Sbjct: 64 NIVLLHDIIHTKETLTFVFE--------------YMHTDL--AQYMIQHPGGLHPY-NVR 106
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDI 276
+ + Q+LR A H ++HRD+KP+N L E LK DFGL+ P + +
Sbjct: 107 LFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGE---LKLADFGLARAKSIPSQTYSSE 163
Query: 277 VGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPF-------------WD---- 317
V + +Y P+VL + D+W G I +L G+ F W
Sbjct: 164 VVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGV 223
Query: 318 KTED---GIFKEVLRNKPDFRRKP--------WPSISN--SAKDFVKKLLVKDPRARLTA 364
TED G+ K + KP++ W +S A+D ++L+ P+ R++A
Sbjct: 224 PTEDTWPGVSK-LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISA 282
Query: 365 AQALSHPW 372
AL HP+
Sbjct: 283 QDALLHPY 290
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 6e-09
Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 59/260 (22%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVK--REVKI 149
+ T+ + LG G FG Y A D G+ RVAVK + ++ + E ++ E +
Sbjct: 7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR----ERIEFLNEASV 62
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
++ H +VV+ + MEL G+L ++ ++R ++
Sbjct: 63 MKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDL--------------KSYLRSLRPEA 107
Query: 210 RYTEKDAAVVVRQMLRVAAE-----CHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFG 262
+++M+++AAE +L+ VHRD+ N + D ++K DFG
Sbjct: 108 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM---VAHDFTVKIGDFG 164
Query: 263 LSDFIKPGKKFQDIVGSAYY------------VAPEVLKRKS-GPESDVWSIGVITY-IL 308
++ +DI + YY +APE LK SD+WS GV+ + I
Sbjct: 165 MT---------RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 215
Query: 309 LCGRRPFWDKTEDGIFKEVL 328
+P+ + + + K V+
Sbjct: 216 SLAEQPYQGLSNEQVLKFVM 235
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 1e-08
Identities = 71/266 (26%), Positives = 105/266 (39%), Gaps = 59/266 (22%)
Query: 102 KLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKILQAL 153
K++G G+FG + K G + VA+K + EK + +D E I+
Sbjct: 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQR-------QDFLSEASIMGQF 63
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
+ H N+++ I E E G L D+ L +
Sbjct: 64 S-HHNIIRLEGVVTKFKPAMIITEYMENGAL-DKYL----------------------RD 99
Query: 214 KDAAVVVRQ---MLR--VAAECHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
D Q MLR A +L + VHRD+ N L S E K +DFGLS
Sbjct: 100 HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLE---CKVSDFGLSRV 156
Query: 267 IK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTE 320
++ P + G + APE + RK SDVWS G++ + ++ G RP+WD +
Sbjct: 157 LEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN 216
Query: 321 DGIFKEVLRNKPDFRRKPWPSISNSA 346
EV++ D R P P SA
Sbjct: 217 ----HEVMKAINDGFRLPAPMDCPSA 238
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 1e-08
Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 38/270 (14%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN---V 159
++G G FG Y G A+K ++K ++ + E + +I+ +L + +
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTGDCPFI 59
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
V AF + + ++L GG+L + + ++E +
Sbjct: 60 VCMSYAFHTPDKLSFILDLMNGGDL-----------------HYHLSQHGVFSEAEMRFY 102
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 278
+++ H +V+RD+KP N L E ++ +D GL+ DF K KK VG
Sbjct: 103 AAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVG 157
Query: 279 SAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD-KTEDG--IFKEVLRNKPD 333
+ Y+APEVL++ +S D +S+G + + LL G PF KT+D I + L +
Sbjct: 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE 217
Query: 334 FRRKPWP-SISNSAKDFVKKLLVKDPRARL 362
P S S + ++ LL +D RL
Sbjct: 218 -----LPDSFSPELRSLLEGLLQRDVNRRL 242
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 2e-08
Identities = 73/289 (25%), Positives = 119/289 (41%), Gaps = 76/289 (26%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAGHEN 158
++G G FG A K +G ++ KM+ A E+ R E+++L L H N
Sbjct: 9 VIGEGNFGQVIRAMIKKDGLKMNAAI----KMLKEFASENDHRDFAGELEVLCKLGHHPN 64
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA- 217
++ A E+ Y+YIA+E G LLD FL + SR E D A
Sbjct: 65 IINLLGACENRGYLYIAIEYAPYGNLLD---------------FL---RKSRVLETDPAF 106
Query: 218 ---------VVVRQMLRVAAECH--LHGL-----VHRDMKPENFLFKSAKEDSSLKATDF 261
+ +Q+L+ A++ + L +HRD+ N L E+ + K DF
Sbjct: 107 AKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVL---VGENLASKIADF 163
Query: 262 GLS--DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPF-- 315
GLS + + K + ++A E L +SDVWS GV+ + I+ G P+
Sbjct: 164 GLSRGEEVYVKKTMGRL--PVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCG 221
Query: 316 ------WDKTEDG---------------IFKEVLRNKPDFRRKPWPSIS 343
++K G + ++ R++P + R P+ IS
Sbjct: 222 MTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRP-YERPPFAQIS 269
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 2e-08
Identities = 80/326 (24%), Positives = 125/326 (38%), Gaps = 69/326 (21%)
Query: 101 GKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
G +G G +G+ Y A K D A+K+IE + + RE+ +L+ L H N
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSAC-----REIALLRELK-HPN 59
Query: 159 VVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
V+ F D V++ + E L +I S A +K +
Sbjct: 60 VISLQKVFLSHADRKVWLLFDYAEHD------LWHIIKFHRASK---ANKKPVQLPRGMV 110
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----IKPGK 271
++ Q+L H + ++HRD+KP N L E +K D G + +KP
Sbjct: 111 KSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA 170
Query: 272 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR-------------RPFW 316
+V + +Y APE+L R D+W+IG I LL P+
Sbjct: 171 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 230
Query: 317 DKTEDGIFK----------EVLRNKP-------DFRRKPWPSIS-------------NSA 346
D IF E ++ P DFRR + + S + A
Sbjct: 231 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKA 290
Query: 347 KDFVKKLLVKDPRARLTAAQALSHPW 372
++KLL DP R+T+ QA+ P+
Sbjct: 291 FHLLQKLLTMDPIKRITSEQAMQDPY 316
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.1 bits (132), Expect = 2e-08
Identities = 69/263 (26%), Positives = 102/263 (38%), Gaps = 58/263 (22%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAGHEN 158
++G G FG A K +G ++ K + A +D R E+++L L H N
Sbjct: 2 VIGEGNFGQVLKARIKKDG----LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 57
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA- 217
++ A E Y+Y+A+E G LLD FL + SR E D A
Sbjct: 58 IINLLGACEHRGYLYLAIEYAPHGNLLD---------------FL---RKSRVLETDPAF 99
Query: 218 ---------VVVRQMLRVAAECHLHGL--------VHRDMKPENFLFKSAKEDSSLKATD 260
+ +Q+L AA+ G+ +HRD+ N L E+ K D
Sbjct: 100 AIANSTASTLSSQQLLHFAADV-ARGMDYLSQKQFIHRDLAARNIL---VGENYVAKIAD 155
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPF--- 315
FGLS + K ++A E L SDVWS GV+ + I+ G P+
Sbjct: 156 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 215
Query: 316 -----WDKTEDGIFKEVLRNKPD 333
++K G E N D
Sbjct: 216 TCAELYEKLPQGYRLEKPLNCDD 238
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 3e-08
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 276 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
I+G+ Y+APE+L K GP D W++GV + L G PF D+T +F+ +L
Sbjct: 540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILN----- 594
Query: 335 RRKPWP----SISNSAKDFVKKLLVKDPRARLTAAQALSHP 371
R PWP +S +A++ ++ LL DP R + HP
Sbjct: 595 RDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHP 635
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 4e-08
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 25/234 (10%)
Query: 100 IGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
+GK LG G+FG AT +A VAVK +++N + D+ E +L+ +
Sbjct: 4 LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVN 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGEL-----LDRIL--AKMISTTLTSAWFLAIRK 207
H +V+K Y A D + + +E + G L R + + + S ++ +L
Sbjct: 62 -HPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPD 120
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ T D Q+ R LVHRD+ N L ++ +K +DFGLS +
Sbjct: 121 ERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRK---MKISDFGLSRDV 177
Query: 268 KPG----KKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 315
K+ + + ++A E L +SDVWS GV+ + I+ G P+
Sbjct: 178 YEEDSYVKRSKGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 230
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 9e-08
Identities = 74/273 (27%), Positives = 113/273 (41%), Gaps = 46/273 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG+GQFG ++ T N +VAVK ++ M + E E +I++ L H+ +V+
Sbjct: 12 KKLGNGQFGEVWMGTWNGN-TKVAVKTLKPGTM----SPESFLEEAQIMKKLR-HDKLVQ 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VV 220
Y A + +YI E G LLD FL + R + V +
Sbjct: 66 LY-AVVSEEPIYIVTEYMSKGSLLD---------------FLK-DGEGRALKLPNLVDMA 108
Query: 221 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKF 273
Q+ A +HRD++ N L + K DFGL+ I + G KF
Sbjct: 109 AQVAAGMAYIERMNYIHRDLRSANIL---VGDGLVCKIADFGLARLIEDNEYTARQGAKF 165
Query: 274 QDIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNK 331
+ APE L + +SDVWS G+ +T ++ GR P+ + ++V R
Sbjct: 166 -----PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG- 219
Query: 332 PDFRRKPWPSISN-SAKDFVKKLLVKDPRARLT 363
R P P S + + + KDP R T
Sbjct: 220 ---YRMPCPQDCPISLHELMLQCWKKDPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 9e-08
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 39/256 (15%)
Query: 104 LGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK ++ A +D RE ++L L HE+
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQ-HEH 68
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+VKFY + + + + E + G+L + A L + + + T+
Sbjct: 69 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG----NRPAELTQSQMLH 124
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
+ +Q+ VHRD+ N L E+ +K DFG+S +D+
Sbjct: 125 IAQQIAAGMVYLASQHFVHRDLATRNCL---VGENLLVKIGDFGMS---------RDVYS 172
Query: 279 SAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
+ YY + PE ++ RK ESDVWS+GV+ + I G++P++ + + +
Sbjct: 173 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 232
Query: 325 KEVLRNKPDFRRKPWP 340
+ + + + R + P
Sbjct: 233 ECITQGRVLQRPRTCP 248
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 1e-07
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 55/291 (18%)
Query: 103 LLGHGQFGYTYVATDKANGDRV--AVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
++G G FG A K +G R+ A+K++++ A +D R E+++L L H
Sbjct: 14 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE------YASKDDHRDFAGELEVLCKLGHH 67
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLD-----RIL--------AKMISTTLTSAWFL 203
N++ A E Y+Y+A+E G LLD R+L A ++TL+S L
Sbjct: 68 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 127
Query: 204 AIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
D V R M ++ + +HRD+ N L E+ K DFGL
Sbjct: 128 HFAAD----------VARGMDYLSQK----QFIHRDLAARNIL---VGENYVAKIADFGL 170
Query: 264 SDFIKPGKK--FQDIVGS--AYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWD 317
S G++ + +G ++A E L SDVWS GV+ + I+ G P+
Sbjct: 171 SR----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 226
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
T +++++ + +R + + + D +++ + P R + AQ L
Sbjct: 227 MTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 274
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 52/216 (24%), Positives = 77/216 (35%), Gaps = 48/216 (22%)
Query: 104 LGHGQFGYT---YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
LGHG FG VAVK +++ + ++ RE ++ L H +V
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI--AAGKKEFLREASVMAQL-DHPCIV 59
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVV 220
+ + + + + MEL G LL +L +K D +
Sbjct: 60 RLIGVCKGEPLMLV-MELAPLGPLLK---------------YL--KKRREIPVSDLKELA 101
Query: 221 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 280
Q+ A VHRD+ N L + K +DFG+S + G S
Sbjct: 102 HQVAMGMAYLESKHFVHRDLAARNVLLVN---RHQAKISDFGMSRALGAG--------SD 150
Query: 281 YY------------VAPEVLK-RKSGPESDVWSIGV 303
YY APE + K +SDVWS GV
Sbjct: 151 YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGV 186
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 52.4 bits (125), Expect = 2e-07
Identities = 75/271 (27%), Positives = 111/271 (40%), Gaps = 46/271 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 14 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 66
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
Y A + +YI E G LLD L + L + + AA +
Sbjct: 67 Y-AVVSEEPIYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDM----------AAQIASG 114
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQD 275
M A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 115 M----AYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-- 165
Query: 276 IVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 166 ---PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--- 219
Query: 334 FRRKPWPS-ISNSAKDFVKKLLVKDPRARLT 363
R P P S D + + K+P R T
Sbjct: 220 -YRMPCPPECPESLHDLMCQCWRKEPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 3e-07
Identities = 74/272 (27%), Positives = 112/272 (41%), Gaps = 48/272 (17%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG +VA+K ++ M E +E +I++ L H+ +V
Sbjct: 14 LGQGCFGEVWMGT--WNGTTKVAIKTLKPGTM----MPEAFLQEAQIMKKLR-HDKLVPL 66
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV-VVR 221
Y A + +YI E G LLD FL D +Y + V +
Sbjct: 67 Y-AVVSEEPIYIVTEFMGKGSLLD---------------FLK-EGDGKYLKLPQLVDMAA 109
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQ 274
Q+ A +HRD++ N L ++ K DFGL+ I + G KF
Sbjct: 110 QIADGMAYIERMNYIHRDLRAANIL---VGDNLVCKIADFGLARLIEDNEYTARQGAKF- 165
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVI-TYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L + +SDVWS G++ T ++ GR P+ + ++V R
Sbjct: 166 ----PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-- 219
Query: 333 DFRRKPWPS-ISNSAKDFVKKLLVKDPRARLT 363
R P P S + +K KDP R T
Sbjct: 220 --YRMPCPQGCPESLHELMKLCWKKDPDERPT 249
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 4e-07
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 37/228 (16%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
K+ TIGK G+FG + + G++VAVK I+ + + E ++
Sbjct: 6 KELKLLQTIGK----GEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMT 54
Query: 152 ALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
L H N+V+ E+ +YI E G L+D + ++ + L L D
Sbjct: 55 QLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLD-- 110
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
V M + A + VHRD+ N L ED+ K +DFGL+ K
Sbjct: 111 --------VCEAMEYLEA----NNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEA 152
Query: 271 KKFQDIVG-SAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPF 315
QD + APE L+ K +SDVWS G++ + I GR P+
Sbjct: 153 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 6e-07
Identities = 51/245 (20%), Positives = 91/245 (37%), Gaps = 38/245 (15%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPI 138
PC + +Y I L G G +V T + R V VK + K
Sbjct: 77 PCETTSSSDPASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----- 131
Query: 139 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLT 198
RE+ IL+ ++ H ++ +A+ + V + M
Sbjct: 132 ---TPGREIDILKTIS-HRAIINLIHAYRWKSTVCMVMP------------------KYK 169
Query: 199 SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258
F + + + A + R++L A H G++HRD+K EN +F E++ L
Sbjct: 170 CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTEN-IFLDEPENAVLG- 227
Query: 259 TDFG----LSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 313
DFG L + + G+ +PE+L ++D+WS G++ + +
Sbjct: 228 -DFGAACKLDAHPDTPQCY-GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNV 285
Query: 314 PFWDK 318
+ K
Sbjct: 286 TLFGK 290
|
Length = 392 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 6e-07
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Query: 505 EKFDIDRDGFITPEELR----------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 554
+ D D DG+I EELR ++ I+ E D D DGRIS EF +
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 8e-07
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 56/236 (23%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV--KILQALAGHEN 158
KLLG G FG + GD + + P+A++ ++ + Q + H
Sbjct: 12 LKLLGSGVFGTVHKGIWIPEGDSIKI----------PVAIKTIQDRSGRQTFQEITDHML 61
Query: 159 VVKFYNAFEDDNYVYIAMELCEG------------GELLDRILAKM--ISTTLTSAWFLA 204
+ D Y+ + +C G G LLD + + W +
Sbjct: 62 AMGSL----DHAYIVRLLGICPGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQ 117
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
I K Y E+ H +VHR++ N L KS DS ++ DFG++
Sbjct: 118 IAKGMYYLEE------------------HRMVHRNLAARNILLKS---DSIVQIADFGVA 156
Query: 265 DFIKPGKK---FQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLC-GRRPF 315
D + P K + + ++A E +L + +SDVWS GV + ++ G P+
Sbjct: 157 DLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY 212
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 401 LKQFALRALASTL---DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR 457
+F L ++ L D EE +LR+ F D D +G IS+ E+R+ L K L +L +
Sbjct: 74 FPEF-LTVMSVKLKRGDKEE--ELREAFKLFDKDHDGYISIGELRRVL-KSLGERLSDEE 129
Query: 458 VLEILQAIDCNTDGLVDFSEFVAATLH 484
V ++L+ D + DG +D+ EF
Sbjct: 130 VEKLLKEYDEDGDGEIDYEEFKKLIKD 156
|
Length = 160 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 2e-06
Identities = 58/245 (23%), Positives = 97/245 (39%), Gaps = 55/245 (22%)
Query: 102 KLLGHGQFGYTYVATDKANGDR-----VAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
LG G+FG ++A K + V VK ++K K + +RE+ + + L+ H
Sbjct: 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKLS-H 67
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+NVV+ + Y+ +E + G+L FL K K
Sbjct: 68 KNVVRLLGLCREAEPHYMILEYTDLGDLKQ---------------FLRATKSKDEKLKPP 112
Query: 217 AVVVRQMLRVAAEC-----HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
+ +Q + + + HL VHRD+ N L S +K + LS
Sbjct: 113 PLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSS---QREVKVSLLSLS----- 164
Query: 270 GKKFQDIVGSAYY-----------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 316
+D+ S YY +APE V + +SDVWS GV+ + + G PF+
Sbjct: 165 ----KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY 220
Query: 317 DKTED 321
+++
Sbjct: 221 GLSDE 225
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 3e-06
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 53/264 (20%)
Query: 97 RYTIGKLLGHGQFGYTY------VATDKANGDRVAVKKIEKNKMILPIAVEDVK--REVK 148
+ T+ + LG G FG Y V D+ RVA+K + + + E ++ E
Sbjct: 7 KITMSRELGQGSFGMVYEGIAKGVVKDEPE-TRVAIKTVNEAASMR----ERIEFLNEAS 61
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
+++ H +VV+ + MEL G+L ++ ++R +
Sbjct: 62 VMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDL--------------KSYLRSLRPE 106
Query: 209 SRYTEKDAAVVVRQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261
A +++M+++A E + + VHRD+ N + ED ++K DF
Sbjct: 107 MENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDF 163
Query: 262 GLS------DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRR 313
G++ D+ + G K + +++PE LK SDVWS GV+ + I +
Sbjct: 164 GMTRDIYETDYYRKGGKG---LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 220
Query: 314 PFWDKTEDGIFKEV----LRNKPD 333
P+ + + + + V L +KPD
Sbjct: 221 PYQGMSNEQVLRFVMEGGLLDKPD 244
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 67/255 (26%), Positives = 101/255 (39%), Gaps = 53/255 (20%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVAT---------------DKANGDR-VAVKKIEKNKMI 135
+F R + LG GQFG ++ D A+ VAVK + +
Sbjct: 1 EFPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD 60
Query: 136 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMIST 195
A ED +EVKIL L+ N+ + D + + ME E G+L ++ L K ++
Sbjct: 61 --NAREDFLKEVKILSRLS-DPNIARLLGVCTVDPPLCMIMEYMENGDL-NQFLQKHVAE 116
Query: 196 TLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255
T A + S T A + +R VHRD+ N L + +
Sbjct: 117 TSGLA--CNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNCLVGK---NYT 168
Query: 256 LKATDFGLSDFIKPGKKFQDIVGSAYY------VAP-------EVLKRKSGPESDVWSIG 302
+K DFG+S +++ S YY P VL K +SDVW+ G
Sbjct: 169 IKIADFGMS---------RNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFG 219
Query: 303 VITY-IL-LCGRRPF 315
V + IL LC +P+
Sbjct: 220 VTLWEILTLCREQPY 234
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 47.8 bits (113), Expect = 7e-06
Identities = 70/253 (27%), Positives = 102/253 (40%), Gaps = 42/253 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEK--NKMILPIAVEDVKREVKILQALAGHENV 159
K+LG G FG Y G+ V + K N+ P A + E I+ ++ H ++
Sbjct: 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHL 71
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKM--ISTTLTSAWFLAIRKDSRYTEKDAA 217
V+ + + +L G LLD + I + L W + I K Y E+
Sbjct: 72 VRLLGVCLSPT-IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE--- 127
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
LVHRD+ N L KS + +K TDFGL+ ++ +K +
Sbjct: 128 ---------------RRLVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNAD 169
Query: 278 GSAY---YVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
G ++A E + RK +SDVWS GV + L+ F K DGI R PD
Sbjct: 170 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT----FGGKPYDGI---PTREIPD 222
Query: 334 F----RRKPWPSI 342
R P P I
Sbjct: 223 LLEKGERLPQPPI 235
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 1e-05
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 426 DAIDVDKNGSISLEEMRQALAK-DLPWKLKESR--VLEILQAIDCNTDGLVDFSEFVAA 481
+D D +G I +EE+R+ L L +E + ID + DG + F EF+ A
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEA 59
|
Length = 60 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 33/221 (14%)
Query: 104 LGHGQFGYT---YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
LG G FG K ++ KI KN P +++ RE ++Q L + +V
Sbjct: 3 LGSGNFGTVKKGMYKMKK--SEKTVAVKILKNDNNDPALKDELLREANVMQQL-DNPYIV 59
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVV 220
+ E ++++ + MEL E G L ++ L K + TEK+ +V
Sbjct: 60 RMIGICEAESWMLV-MELAELGPL-NKFLQK----------------NKHVTEKNITELV 101
Query: 221 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 280
Q+ VHRD+ N L + K +DFGLS + + +
Sbjct: 102 HQVSMGMKYLEETNFVHRDLAARNVLLVT---QHYAKISDFGLSKALGADENYYKAKTHG 158
Query: 281 YY----VAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPF 315
+ APE + K +SDVWS GV+ + G++P+
Sbjct: 159 KWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPY 199
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 41/235 (17%)
Query: 104 LGHGQFGYTYVA--TDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG Y T VA+K +++N P ++ ++E +++ L H N
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQ-HPN 69
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V + + E G+L + ++ + + + K S D +
Sbjct: 70 IVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSL----DCSD 125
Query: 219 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
+ +++AA H VHRD+ N L E ++K +DFGLS +D
Sbjct: 126 FLHIAIQIAAGMEYLSSHHFVHRDLAARNCL---VGEGLTVKISDFGLS---------RD 173
Query: 276 IVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 316
I + YY + PE +L K ESD+WS GV+ + I G +P++
Sbjct: 174 IYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYY 228
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 3e-05
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N+V + ++ V++ ++ EGG+L I FL I ++ ++ AA
Sbjct: 46 NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK-----------FLNIPEEC--VKRWAA 92
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+M+ H G+V RD+ P N L ++ T F ++ + +
Sbjct: 93 ----EMVVALDALHREGIVCRDLNPNNILLDDR---GHIQLTYFSRWSEVEDSCDGEAV- 144
Query: 278 GSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
Y APEV E+ D WS+G I + LL G + + GI N P++
Sbjct: 145 -ENMYCAPEVGGISEETEACDWWSLGAILFELLTG-KTLVECHPSGINTHTTLNIPEW-- 200
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPW 372
+S A+ +++LL +P RL A A SHP+
Sbjct: 201 -----VSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPF 236
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 5e-05
Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y +G+ VA+K + +N P A +++ E ++ A G
Sbjct: 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS--PKANKEILDEAYVM-AGVGSP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKM--ISTTLTSAWFLAIRKDSRYTEKD 215
V + V + +L G LLD + I + W + I K Y E+
Sbjct: 70 YVCRLLGICLTST-VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEE- 127
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
VR LVHRD+ N L KS + +K TDFGL+ + +
Sbjct: 128 ----VR-------------LVHRDLAARNVLVKSP---NHVKITDFGLARLLDIDETEYH 167
Query: 276 IVGSA----YYVAPEVLKRKSGPESDVWSIGVITYILLC-GRRPF 315
G + +L R+ +SDVWS GV + L+ G +P+
Sbjct: 168 ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPY 212
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 7e-05
Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 36/234 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+GK+LG G+FG + +VAVK + K + +E+ E ++
Sbjct: 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTM-KLDIHTYSEIEEFLSEAACMKDFD- 59
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDR--ILAKMISTTLTSAWFLAIRKDSRYTE 213
H NV+K + + E ++ IL M L S SR
Sbjct: 60 HPNVMKL---------IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLL-----YSRLGG 105
Query: 214 KDAAVVVRQMLRVAAECHL-------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
+ ++ +L+ + L +HRD+ N + + ED ++ DFGLS
Sbjct: 106 LPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR---EDMTVCVADFGLSKK 162
Query: 267 IKPGKKFQDIVGSAY---YVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 315
I G ++ + ++A E L R +SDVW+ GV + I G+ P+
Sbjct: 163 IYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPY 216
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 9e-05
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 273
V RQ+L H G++HRD+K EN + + ED L DFG + F +
Sbjct: 263 TAVARQLLSAIDYIHGEGIIHRDIKTEN-VLVNGPEDICLG--DFGAACFARGSWSTPFH 319
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY 306
I G+ APEVL P D+WS G++ +
Sbjct: 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIF 353
|
Length = 461 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 235 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPE-VLKR 290
LVHRD+ N L K+ + +K TDFGL+ + +K G ++A E +L R
Sbjct: 130 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHR 186
Query: 291 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI-FKEVLRNKPDFRRKPWPSI 342
+SDVWS GV + L+ G +P+ DGI E+ R P P I
Sbjct: 187 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEISSILEKGERLPQPPI 235
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 274
D + R +LR H + ++HRD+K EN +F + D L DFG + F P
Sbjct: 183 DILAIERSVLRAIQYLHENRIIHRDIKAEN-IFINHPGDVCLG--DFGAACF--P----V 233
Query: 275 DIVGSAYY--------VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI 323
DI + YY APE+L R GP D+WS G++ + + ++K DG+
Sbjct: 234 DINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEK--DGL 289
|
Length = 391 |
| >gnl|CDD|204523 pfam10591, SPARC_Ca_bdg, Secreted protein acidic and rich in cysteine Ca binding region | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 1e-04
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 482 TLHVHQLEEHDSEK-WHLRSQAAFEKF---DIDRDGFITPEELR-MHTGLKGS---IDPL 533
H +L + D +K + + F D + DG+++ EL + L I P
Sbjct: 33 VDHYSELLKRDEQKNYPMCKDPLGWMFNQLDTNHDGYLSRSELAPLRAPLVPMEHCIKPF 92
Query: 534 LEEADIDKDGRISLSEFRR 552
+ D DKDG ISL E+ +
Sbjct: 93 FKSCDADKDGLISLREWCK 111
|
The SPARC_Ca_bdg domain of Secreted Protein Acidic and Rich in Cysteine is responsible for the anti-spreading activity of human urothelial cells. It is rich in alpha-helices. This extracellular calcium-binding domain contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2. Length = 112 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 2e-04
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 100 IGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
GK LG G FG AT + N RVAVK ++ + E + E+KIL L
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLG 99
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLD 186
H+N+V A V + E C G+LL+
Sbjct: 100 QHKNIVNLLGACTHGGPVLVITEYCCYGDLLN 131
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|238155 cd00252, SPARC_EC, SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 472 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGS 529
D E H +L++ F + D + DG ++ EL +
Sbjct: 22 HEDLKERDELEKHKLRLKKSLYPMCKDPVGWMFNQLDGNYDGKLSHHELAPIRLDPNEHC 81
Query: 530 IDPLLEEADIDKDGRISLSE 549
I P E D+DKDG ISL E
Sbjct: 82 IKPFFESCDLDKDGSISLDE 101
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. Length = 116 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 3e-04
Identities = 69/288 (23%), Positives = 109/288 (37%), Gaps = 82/288 (28%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQA 152
R +GK LG G FG + D D+ A + KM+ A R E+KIL
Sbjct: 8 RLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 66
Query: 153 LAGHENVVKFYNA-FEDDNYVYIAMELCEGG----------------------------- 182
+ H NVV A + + + +E C+ G
Sbjct: 67 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSG 126
Query: 183 -----ELLDRILAKMIST-TLTSAWFLAIRKDSRYTEKDAAV------------------ 218
E L R L + S+ + S+ F+ + S E++A
Sbjct: 127 YGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSF 186
Query: 219 -VVRQMLRVAA-ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------DFIKP 269
V + M +A+ +C +HRD+ N L E++ +K DFGL+ D+++
Sbjct: 187 QVAKGMEFLASRKC-----IHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRK 238
Query: 270 GKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 315
G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 239 G----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 282
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 38.6 bits (91), Expect = 3e-04
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 512 DGFITPEELRM---HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 555
G IT EEL+ G+ S +D L E D D DG+IS EF LL+
Sbjct: 2 KGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQ 51
|
Length = 53 |
| >gnl|CDD|205383 pfam13202, EF_hand_3, EF hand | Back alignment and domain information |
|---|
Score = 37.6 bits (89), Expect = 4e-04
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 501 QAAFEKFDIDRDGFITPEELR 521
+ F +FD + DG I+ EEL+
Sbjct: 2 KDLFRQFDTNGDGKISKEELK 22
|
Length = 25 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 4e-04
Identities = 38/158 (24%), Positives = 52/158 (32%), Gaps = 39/158 (24%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
KLL G Y+ + +K D +REV ILQ LA
Sbjct: 2 SIKLLKGGLTNRVYLLGT--KDEDYVLKINPSR-----EKGADREREVAILQLLARKGLP 54
Query: 160 V-KFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
V K + E D + Y+ ME EG L + S ++D A
Sbjct: 55 VPKVLASGESDGWSYLLMEWIEGETL---------------------DEVSEEEKEDIAE 93
Query: 219 VVRQMLRVAAECHLH-----GLVHRDMKPENFLFKSAK 251
+ ++L LH L H D+ P N L K
Sbjct: 94 QLAELLA-----KLHQLPLLVLCHGDLHPGNILVDDGK 126
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|226699 COG4248, COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 6e-04
Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 10/104 (9%)
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
V R + A H HG V D+ +FL + + + F ++ G VG
Sbjct: 122 VARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA---NGTLHLCPVG 178
Query: 279 SAYYVAPEVLKRKS------GPESDVWSIGVITY-ILLCGRRPF 315
+ + PE+ S D + + V+ + +L GR P+
Sbjct: 179 VSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPY 222
|
Length = 637 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 37.2 bits (87), Expect = 6e-04
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 420 DLRDQFDAIDVDKNGSISLEEMRQALAK 447
+LR+ F D D +G IS EE+R+AL
Sbjct: 1 ELREAFKLFDKDGDGYISAEELRKALRS 28
|
Length = 30 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 8e-04
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Query: 234 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS--AYYVAPEVLK-R 290
G VH+ + L S D K + F K + + G + APE ++
Sbjct: 127 GYVHKGLAAHKVLVNS---DLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYH 183
Query: 291 KSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 327
SDVWS G++ + ++ G RP+WD + + K V
Sbjct: 184 HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV 221
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|205383 pfam13202, EF_hand_3, EF hand | Back alignment and domain information |
|---|
Score = 36.5 bits (86), Expect = 0.001
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 421 LRDQFDAIDVDKNGSISLEEMRQAL 445
L+D F D + +G IS EE+++ L
Sbjct: 1 LKDLFRQFDTNGDGKISKEELKRLL 25
|
Length = 25 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.001
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 26/106 (24%)
Query: 236 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE--------- 286
VHRD+ N L E+ +K DFGLS ++I + YY A E
Sbjct: 152 VHRDLATRNCL---VGENMVVKIADFGLS---------RNIYSADYYKASENDAIPIRWM 199
Query: 287 ----VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 327
+ + ESDVW+ GV+ + I G +P++ + + V
Sbjct: 200 PPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYV 245
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.001
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 30/232 (12%)
Query: 98 YTIGKLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
+T+G++LG G+FG A ++ + +VAVK + K + +E+ RE ++
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKML-KADIFSSSDIEEFLREAACMKEF- 58
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGEL-LDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H NV+K + +++ G L + ++ + + L R
Sbjct: 59 DHPNVIKL---------IGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFT 109
Query: 214 KDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
+VR M+ +A+ +HRD+ N + E+ ++ DFGLS I G
Sbjct: 110 LPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN---ENMTVCVADFGLSKKIYSG 166
Query: 271 KKFQDIVGSAYYVAPEVLKRKS------GPESDVWSIGVITY-ILLCGRRPF 315
++ G A + + L +S SDVW+ GV + I+ G+ P+
Sbjct: 167 DYYRQ--GCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPY 216
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 35.9 bits (84), Expect = 0.001
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 420 DLRDQFDAIDVDKNGSISLEEMRQALAK 447
+L++ F D D +G IS EE ++ L K
Sbjct: 1 ELKEAFKEFDKDGDGKISFEEFKELLKK 28
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 36.6 bits (85), Expect = 0.002
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 395 FVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQAL 445
++ L++ D+E + F+ ID D +G IS EE +A+
Sbjct: 10 YIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 219 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278
V+RQ+L + H G+VHRD+KPEN L D +K DFG + + G F + G
Sbjct: 314 VMRQVLTGLRKLHRIGIVHRDIKPENLLVTV---DGQVKIIDFGAAVDMCTGINFNPLYG 370
Query: 279 --SAYYVAPEVL 288
Y PE L
Sbjct: 371 MLDPRYSPPEEL 382
|
Length = 507 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 35.4 bits (83), Expect = 0.002
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 501 QAAFEKFDIDRDGFITPEELRM 522
+ AF FD D DG I EE +
Sbjct: 3 KEAFRLFDKDGDGKIDFEEFKD 24
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 27/184 (14%)
Query: 126 VKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 185
+ K K I +E+ E+ L L HEN++K + Y+ +
Sbjct: 196 IAKRVKAGSRAAIQLEN---EILALGRL-NHENILKIEEILRSEANTYM---------IT 242
Query: 186 DRILAKMISTTLTSA--WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 243
+ + S A W KD ++ A++ +Q+L H L+HRD+K E
Sbjct: 243 QKYDFDLYSFMYDEAFDW-----KDRPLLKQTRAIM-KQLLCAVEYIHDKKLIHRDIKLE 296
Query: 244 NFLFKSAKEDSSLKATDFG-LSDFIKPGKKFQ-DIVGSAYYVAPEVLKRKSGPE-SDVWS 300
N D + DFG F K + F VG+ +PE+L E +D+WS
Sbjct: 297 NIFLNC---DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWS 353
Query: 301 IGVI 304
G+I
Sbjct: 354 CGLI 357
|
Length = 501 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 36.4 bits (85), Expect = 0.003
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 423 DQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAA 481
F ++D D +G IS +E R L K L S VL I D + DG +D EF A
Sbjct: 3 QIFRSLDPDGDGLISGDEARPFLGK---SGLPRS-VLAQIWDLADTDKDGKLDKEEFAIA 58
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|223733 COG0661, AarF, Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 50/145 (34%)
Query: 158 NVVKFYNAFEDDNYVYIA-------------MELCEGGELLDRIL-------AKMISTTL 197
N +F F+DD VY+ ME +G ++ D K ++ L
Sbjct: 214 NAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELL 273
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257
A+ RQ+LR G H D P N L + D +
Sbjct: 274 VRAFL------------------RQLLR-------DGFFHADPHPGNIL---VRSDGRIV 305
Query: 258 ATDFGLSDFIKPGKKFQDIVGSAYY 282
DFG+ + P KF+ +
Sbjct: 306 LLDFGIVGRLDP--KFRRYLAELLL 328
|
Length = 517 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 35.4 bits (82), Expect = 0.004
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 463 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL 520
+ +D + DG +D E L L+ D E +A F + D D DG I+ EE
Sbjct: 1 KLLDKDGDGYIDVEELRKL-LKALGLKLTDEEV-EELIEADFNEIDKDGDGRISFEEF 56
|
Length = 60 |
| >gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 77/342 (22%), Positives = 128/342 (37%), Gaps = 64/342 (18%)
Query: 10 VSGSNSGSNNNNANH--HRNANKEEAKR------RHNHHARNDTTHKHQHQHQERAKNYQ 61
NS NN+A+ + + A+R R + + K +
Sbjct: 26 ALSGNSPKANNSASTGQTTSRSTNSARRSGSKRDRETATSTDSGRTKSHEGAATTKQATT 85
Query: 62 QLKTKQHQKTNSRRQ--TGVIPCGKRTD------FGYDKDFD-RRYTIGKLLGHGQFGYT 112
T +++ T +P R + G D D +R+ I LLG G FG
Sbjct: 86 TPTTNVEVAPPPKKKKVTYALPNQSREEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKV 145
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL-----AGHENVVKFYNAFE 167
A D+ + AV KI +N +P D K E++ ++ + A ++K F+
Sbjct: 146 VEAWDRKRKEYCAV-KIVRN---VPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201
Query: 168 DDN-YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
++ ++ I M G LLD W I K ++ + A ++ Q
Sbjct: 202 NETGHMCIVMPK-YGPCLLD--------------W---IMKHGPFSHRHLAQIIFQTGVA 243
Query: 227 AAECH--LHGLVHRDMKPENFLFKSAK-------------EDSSLKATDFGLSDFIKPGK 271
H LH L+H D+KPEN L +++ + ++ D G
Sbjct: 244 LDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLG--GCCDERH 300
Query: 272 KFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGR 312
IV + +Y +PEV L +D+WS+G I Y L G+
Sbjct: 301 SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGK 342
|
Length = 467 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Query: 80 IPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA 139
+P R +F D +G++LG G FG T V K+ KM+ P A
Sbjct: 26 LPYDSRWEFPRD-----GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAV-KMLKPTA 79
Query: 140 VEDVKR----EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD 186
K+ E+KI+ L H N+V A +YI E C G+L++
Sbjct: 80 RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVN 130
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 577 | |||
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.97 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.96 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.95 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.95 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.95 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.94 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.94 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.94 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.94 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.92 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.91 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.9 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.9 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.9 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.9 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.89 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.88 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.88 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.87 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.86 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.86 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.83 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.82 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.82 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.81 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.79 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.78 | |
| PTZ00183 | 158 | centrin; Provisional | 99.78 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.78 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.77 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.76 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.75 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 99.75 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.74 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.72 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 99.72 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 99.7 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.67 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.67 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.66 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.66 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.65 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.61 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.49 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 99.46 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.46 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.44 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.43 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.42 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.41 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.41 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.4 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.31 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.31 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.28 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.24 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 99.23 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.23 | |
| KOG0038 | 189 | consensus Ca2+-binding kinase interacting protein | 99.21 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.12 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.12 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.12 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.11 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.1 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.1 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.07 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 99.04 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 99.03 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.97 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 98.96 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.94 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.94 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.93 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 98.92 | |
| PTZ00183 | 158 | centrin; Provisional | 98.91 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.91 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.89 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 98.89 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.89 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.88 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.84 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 98.83 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 98.82 | |
| PTZ00184 | 149 | calmodulin; Provisional | 98.8 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 98.79 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 98.79 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.77 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 98.77 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.77 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 98.76 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 98.76 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.73 | |
| cd00252 | 116 | SPARC_EC SPARC_EC; extracellular Ca2+ binding doma | 98.71 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 98.7 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 98.7 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.69 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 98.69 |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-63 Score=477.51 Aligned_cols=273 Identities=36% Similarity=0.627 Sum_probs=246.1
Q ss_pred CccccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchh----hHHHHHHHHHHHHHhcCCCCeeEEE
Q 008127 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI----AVEDVKREVKILQALAGHENVVKFY 163 (577)
Q Consensus 88 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~----~~~~~~~E~~~l~~l~~hpniv~~~ 163 (577)
....+.+.+.|.+.+.||+|+||.|-+|..+.||+.||||++.+....... ....+.+|++||++| +|||||+++
T Consensus 164 ~~~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~ 242 (475)
T KOG0615|consen 164 KVPPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIK 242 (475)
T ss_pred cCccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEe
Confidence 344566788899999999999999999999999999999999876553311 233468999999999 599999999
Q ss_pred EEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCC
Q 008127 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 243 (577)
Q Consensus 164 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~ 243 (577)
++|+..++.||||||++||+|++++..+ +.+.+...+.+++|++.||.|||++||+||||||+
T Consensus 243 d~f~~~ds~YmVlE~v~GGeLfd~vv~n-----------------k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPe 305 (475)
T KOG0615|consen 243 DFFEVPDSSYMVLEYVEGGELFDKVVAN-----------------KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPE 305 (475)
T ss_pred eeeecCCceEEEEEEecCccHHHHHHhc-----------------cccccchhHHHHHHHHHHHHHHHHcCcccccCCcc
Confidence 9999999999999999999999988655 77889999999999999999999999999999999
Q ss_pred cEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCC----CCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 244 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 244 NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
|||+....++..+||+|||+|+.......+.+.||||.|.|||++.++. ..++||||||||||-+++|.+||.+..
T Consensus 306 NILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~ 385 (475)
T KOG0615|consen 306 NILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY 385 (475)
T ss_pred eEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccccc
Confidence 9999976677899999999999998888889999999999999997542 458999999999999999999998876
Q ss_pred hhH-HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 320 EDG-IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 320 ~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+. ..++|.++...+....|..+|+++.+||.+||..||++|||+.++|+||||+....
T Consensus 386 ~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 386 TDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred CCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 655 89999999999988999999999999999999999999999999999999997653
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-58 Score=463.11 Aligned_cols=258 Identities=36% Similarity=0.635 Sum_probs=240.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|...+.||+|||+.||.+++..+|+.||+|++.+..+..+...+.+.+||+|.++|. |||||+++++|++.+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEE
Confidence 57999999999999999999999999999999999988888888999999999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
.|+|+.++|...+.+ .+.++|.+++.++.||+.||.|||+++|||||||..|++|+ ++.+
T Consensus 97 LELC~~~sL~el~Kr-----------------rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~---~~~~ 156 (592)
T KOG0575|consen 97 LELCHRGSLMELLKR-----------------RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLN---ENMN 156 (592)
T ss_pred EEecCCccHHHHHHh-----------------cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeec---CcCc
Confidence 999999999887653 48899999999999999999999999999999999999998 5889
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
|||+|||||..+... ++..+.||||-|+|||++... .+..+||||+|||+|-|++|++||...+..+.+..|......
T Consensus 157 VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~ 236 (592)
T KOG0575|consen 157 VKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYS 236 (592)
T ss_pred EEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcc
Confidence 999999999998744 677899999999999998754 599999999999999999999999999999999999998877
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
++. .+|.++++||.+||..||.+|||+++||.|+||+....
T Consensus 237 ~P~----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~ 277 (592)
T KOG0575|consen 237 MPS----HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFT 277 (592)
T ss_pred ccc----ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCc
Confidence 664 68999999999999999999999999999999966543
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-59 Score=423.39 Aligned_cols=298 Identities=32% Similarity=0.649 Sum_probs=268.8
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.|.+.|.+.+.||+|.|+.||++.+..||+.+|+|+|....+.. ...+.+.+|++|-+.|+ |||||++.+.+...+..
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~-~~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~~ 85 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFH 85 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcc-ccHHHHHHHHHHHHhcC-CCcEeehhhhhccccee
Confidence 35678999999999999999999999999999999998766543 36788999999999995 99999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|||+|++.|++|...+.+. ..+++..+-.+++||++||.|||.+||||||+||+|+||.+...
T Consensus 86 ylvFe~m~G~dl~~eIV~R-----------------~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~ 148 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVAR-----------------EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAK 148 (355)
T ss_pred EEEEecccchHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccC
Confidence 9999999999998776544 44789999999999999999999999999999999999998777
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
..-|||+|||+|..+..+.....++|||.|||||++.. .++.++||||.|||||-|+.|.+||++.+...+++.|+.+.
T Consensus 149 ~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~ 228 (355)
T KOG0033|consen 149 GAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGA 228 (355)
T ss_pred CCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccc
Confidence 88899999999998887777778999999999999875 56899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC-CCCcccHHHHHhhHHhhhhhhhhHHHHHhhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA-SEIPIDISVLNNMRQFVKYSRLKQFALRALA 410 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~-~~~~~~~~~~~~lk~~~~~s~l~~~~l~~~~ 410 (577)
..++.+.|+.+++++++||.+||..||.+|+|+.|+|+|||+++.... +.++. ....+.|+.|....+|+..++..+.
T Consensus 229 yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~-~dtvd~lrkfNarRKLKgavLtav~ 307 (355)
T KOG0033|consen 229 YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRERVASAIHR-QDTVDCLKKFNARRKLKGAILTTVI 307 (355)
T ss_pred cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhh-HHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999986543 33333 3557889999999999998877664
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-57 Score=433.09 Aligned_cols=257 Identities=31% Similarity=0.586 Sum_probs=234.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|+++++||+|+||+||+++.+.|++.||+|++.+..+......+....|..||..+ +||.||+++-.|++.+.+|+|
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCeEEEE
Confidence 4799999999999999999999999999999999998877666788899999999998 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||+.||+|+.+|.+ .+.|++..++.++.+|+.||.|||++|||||||||+||||+ .+|+
T Consensus 104 ld~~~GGeLf~hL~~-----------------eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd---~~GH 163 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQR-----------------EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLD---EQGH 163 (357)
T ss_pred EeccCCccHHHHHHh-----------------cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeec---CCCc
Confidence 999999999877754 48899999999999999999999999999999999999999 6899
Q ss_pred eeEEecCCCcc-cCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~-~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
|+|+|||+++. ...+....++|||+.|||||++.+ .++.++|+||||+++|+|++|.+||.+.+...++++|+.++..
T Consensus 164 i~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~ 243 (357)
T KOG0598|consen 164 IKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLP 243 (357)
T ss_pred EEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCC
Confidence 99999999984 455566778999999999998765 5699999999999999999999999999999999999998733
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCC----CHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL----TAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rp----t~~~il~hp~f~~~ 376 (577)
.+. ..++.++++||+++|..||++|. .+.++-+||||+..
T Consensus 244 ~~p---~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 244 LPP---GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred CCC---ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 222 23789999999999999999996 78999999999975
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-55 Score=447.01 Aligned_cols=323 Identities=53% Similarity=0.907 Sum_probs=286.9
Q ss_pred cccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
....+...|.+.+.||.|.||.||+|+++.||+.+|+|.+.+...........+.+|+.+|+++..|||||.++++|++.
T Consensus 29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~ 108 (382)
T KOG0032|consen 29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP 108 (382)
T ss_pred ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence 34556778999999999999999999999999999999998887655556688999999999997799999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
..+++|||+|.||+|++.+... .+++..+..++.||+.|+.|||+.||+||||||+|+|+..
T Consensus 109 ~~~~lvmEL~~GGeLfd~i~~~------------------~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~ 170 (382)
T KOG0032|consen 109 DSVYLVMELCEGGELFDRIVKK------------------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLAS 170 (382)
T ss_pred CeEEEEEEecCCchHHHHHHHc------------------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeecc
Confidence 9999999999999999988532 2899999999999999999999999999999999999987
Q ss_pred CCC-CCCeeEEecCCCcccCCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 250 AKE-DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 250 ~~~-~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
..+ ++.+|++|||+|............+||+.|+|||++. ..++..+||||+||++|.|++|.+||++.+..+.+..+
T Consensus 171 ~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i 250 (382)
T KOG0032|consen 171 KDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAI 250 (382)
T ss_pred ccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHH
Confidence 544 4589999999999988877788999999999999998 57899999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCCcccHHHHHhhHHhhhhhhhhHHHHH
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALR 407 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~~~~~~~~~~lk~~~~~s~l~~~~l~ 407 (577)
..+...+....|+.++..+.+||..||..||.+|+|+.++|+|||++........+........++++...+++++..+.
T Consensus 251 ~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (382)
T KOG0032|consen 251 LRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLALR 330 (382)
T ss_pred HcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999876666666666666666677666666665544
Q ss_pred hhccccchHHHhhhccccccccCCCC
Q 008127 408 ALASTLDDEELADLRDQFDAIDVDKN 433 (577)
Q Consensus 408 ~~~~~~~~~~~~~l~~~F~~~D~d~d 433 (577)
......+ +..++..|..+|.+.+
T Consensus 331 ~~~~~~~---~~~~~~~~~~~~~~~~ 353 (382)
T KOG0032|consen 331 VLAESLS---ISGLKEMFKLMDTDNN 353 (382)
T ss_pred HHhhhhh---HHHHHHHHHhhccccc
Confidence 4444444 7778888999998887
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-55 Score=409.01 Aligned_cols=254 Identities=31% Similarity=0.581 Sum_probs=235.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++++.||.|+||.|.+++++.+|..+|+|++.+.+...-...+...+|..+|+.+. ||+++++++.|.+.+.+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEEEE
Confidence 36899999999999999999999999999999999888777778889999999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++||.|+.++.+ .++|++..++.++.||+.||+|||+++|++|||||+|||++ .+|+
T Consensus 123 meyv~GGElFS~Lrk-----------------~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD---~~G~ 182 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRK-----------------SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLD---QNGH 182 (355)
T ss_pred EeccCCccHHHHHHh-----------------cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeec---cCCc
Confidence 999999999887754 48999999999999999999999999999999999999999 5899
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||+|+..... ..+.||||.|+|||++..+ ++.++|+|||||++|||+.|.+||.+.++..++.+|+.+...+
T Consensus 183 iKitDFGFAK~v~~r--T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~f 260 (355)
T KOG0616|consen 183 IKITDFGFAKRVSGR--TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKF 260 (355)
T ss_pred EEEEeccceEEecCc--EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccC
Confidence 999999999987643 5678999999999988765 5889999999999999999999999999999999999999888
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
+. .+++++++||+++|+.|-.+|. ...+|..||||+..
T Consensus 261 P~----~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 261 PS----YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred Cc----ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence 74 5789999999999999999994 57799999999964
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-55 Score=419.97 Aligned_cols=256 Identities=30% Similarity=0.447 Sum_probs=224.8
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-eEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-YVYIA 175 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~~lv 175 (577)
+.+.+..||+|+.|+||+|+++.|++.+|+|+|... ..+...+++.+|+++++.. +||+||++|+.|..++ .++|+
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEee
Confidence 567788999999999999999999999999999443 2356778899999999999 6999999999999988 59999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||.+|+|.+.+... ++++|.....++.+|++||.|||. ++||||||||+|||+++ .+
T Consensus 157 mEYMDgGSLd~~~k~~-----------------g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs---kG 216 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKRV-----------------GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS---KG 216 (364)
T ss_pred hhhcCCCCHHHHHhhc-----------------CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc---CC
Confidence 9999999998876533 779999999999999999999996 99999999999999995 78
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCC-----ChhHHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK-----TEDGIFKEVL 328 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~-----~~~~~~~~i~ 328 (577)
.|||||||.++.+... ...+++||..|||||.+.+ .|+.++||||||++++||++|+.||... ...+++..|.
T Consensus 217 eVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv 295 (364)
T KOG0581|consen 217 EVKICDFGVSGILVNS-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV 295 (364)
T ss_pred CEEeccccccHHhhhh-hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh
Confidence 8999999999887655 5578999999999999886 6799999999999999999999999774 5566777777
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+.+.-... ..+|+++++||..||++||.+|||+.++++|||++....
T Consensus 296 ~~ppP~lP~--~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 296 DEPPPRLPE--GEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred cCCCCCCCc--ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 754322211 248999999999999999999999999999999997654
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-55 Score=437.87 Aligned_cols=258 Identities=36% Similarity=0.658 Sum_probs=236.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|.+++.||+|+|++|++|+++.+++.||||++.+.-...+.-...+.+|-.+|.+|.+||.|++||-.|+++..+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 47999999999999999999999999999999998876666666778899999999998999999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||+++|+|+++|.+. +.|.+..++.++.+|+.||+|||++|||||||||+||||+ .+++
T Consensus 153 Le~A~nGdll~~i~K~-----------------Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd---~dmh 212 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKY-----------------GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLD---KDGH 212 (604)
T ss_pred EEecCCCcHHHHHHHh-----------------CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEc---CCCc
Confidence 9999999999988644 8899999999999999999999999999999999999999 5899
Q ss_pred eeEEecCCCcccCCCCC--------------ccccccCCccccchhcccCC-CCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 256 LKATDFGLSDFIKPGKK--------------FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--------------~~~~~gt~~y~aPE~~~~~~-~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+||+|||.|+.+.+... ...++||..|.+||+|...+ ++.+|||+||||||.|+.|.+||.+.++
T Consensus 213 ikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne 292 (604)
T KOG0592|consen 213 IKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE 292 (604)
T ss_pred EEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH
Confidence 99999999987653211 14589999999999998776 8899999999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
--++++|+.-...|+ +++++.+.+||+++|..||.+|+|+.+|.+||||....
T Consensus 293 yliFqkI~~l~y~fp----~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 293 YLIFQKIQALDYEFP----EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred HHHHHHHHHhcccCC----CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence 999999999777666 56889999999999999999999999999999998754
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-55 Score=435.35 Aligned_cols=260 Identities=32% Similarity=0.575 Sum_probs=234.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|+.+.||..+|+|++.++.+......+.++.|.++|... ++|+||++|-.|++..++|||
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCeeEEE
Confidence 5799999999999999999999999999999999999988888899999999999985 799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+|||++...|... ..|++..++.++.+++.|++.||..|+|||||||+|+||+ ..|+
T Consensus 220 MEylPGGD~mTLL~~~-----------------~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD---~~GH 279 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRK-----------------DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLID---AKGH 279 (550)
T ss_pred EEecCCccHHHHHHhc-----------------CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeec---CCCC
Confidence 9999999999877644 8899999999999999999999999999999999999999 5899
Q ss_pred eeEEecCCCcccCC----------------------C--C-----C-------------------ccccccCCccccchh
Q 008127 256 LKATDFGLSDFIKP----------------------G--K-----K-------------------FQDIVGSAYYVAPEV 287 (577)
Q Consensus 256 vkl~DFGla~~~~~----------------------~--~-----~-------------------~~~~~gt~~y~aPE~ 287 (577)
+||+||||+..+.. . . . ....+|||.|||||+
T Consensus 280 iKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEV 359 (550)
T KOG0605|consen 280 IKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEV 359 (550)
T ss_pred EeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHH
Confidence 99999999853210 0 0 0 012479999999999
Q ss_pred cccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC---C
Q 008127 288 LKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---T 363 (577)
Q Consensus 288 ~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp---t 363 (577)
+.++ |+..+|+||||||+|||+.|.+||.+.++.+.+++|+.....+..+.-..++++++|||.+||+ ||.+|. .
T Consensus 360 ll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G 438 (550)
T KOG0605|consen 360 LLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKG 438 (550)
T ss_pred HhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCccc
Confidence 8764 6999999999999999999999999999999999999988766666667789999999999999 999998 4
Q ss_pred HHHHhcCccccccC
Q 008127 364 AAQALSHPWVREGG 377 (577)
Q Consensus 364 ~~~il~hp~f~~~~ 377 (577)
++||.+||||+...
T Consensus 439 ~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 439 AEEIKKHPFFKGVD 452 (550)
T ss_pred HHHHhcCCccccCC
Confidence 99999999999753
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-54 Score=417.20 Aligned_cols=262 Identities=31% Similarity=0.603 Sum_probs=235.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|.+.+.||+|+||+||+|+++.++..||||.|.+... .....+.+..|+.+|+.+. |||||.+++++..++++|+|
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEEEE
Confidence 479999999999999999999999999999999988765 3567788999999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC--
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED-- 253 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~-- 253 (577)
||||.||+|.+++... +.+++..++.++.||+.||.+||+++||||||||.||||+....+
T Consensus 88 MEyC~gGDLs~yi~~~-----------------~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~ 150 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRR-----------------GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDT 150 (429)
T ss_pred EEeCCCCCHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCC
Confidence 9999999999988654 789999999999999999999999999999999999999964223
Q ss_pred -CCeeEEecCCCcccCCCCCccccccCCccccchhc-ccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 254 -SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 -~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
..+||+|||+|+.+.++....+.||+|.|||||++ .++|+.|+|+||+|+|+|+|++|++||...+..+++..+..+.
T Consensus 151 ~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~ 230 (429)
T KOG0595|consen 151 SPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGN 230 (429)
T ss_pred CceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccc
Confidence 68999999999999988888899999999999998 6789999999999999999999999999999999988776655
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
...+.. ...+++.+.+|+...|..+|.+|.+..+-+.|+++....
T Consensus 231 ~~~~~~-~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 231 EIVPVL-PAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred cccCch-hhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 433322 234667788999999999999999999999999988654
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-54 Score=436.97 Aligned_cols=257 Identities=33% Similarity=0.624 Sum_probs=237.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
-|++++.||.|+-|.|.+|++..||+.+|||+|.+...........+.+||-||+-+ .|||++.+|++|+...++|+|.
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-EHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-cCCCeeeeeeeeccCceEEEEE
Confidence 589999999999999999999999999999999887544455677899999999988 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++||.|++++..+ +++++.+++.+++||+.|+.|||..+|+||||||+|+||+. .++|
T Consensus 92 Eyv~gGELFdylv~k-----------------G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~---~~nI 151 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRK-----------------GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDV---KNNI 151 (786)
T ss_pred EecCCchhHHHHHhh-----------------CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhc---ccCE
Confidence 999999999988755 89999999999999999999999999999999999999994 5569
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||+|..-.++.-..+.||+|.|.|||++.|.. +.++||||+|||||.|+||+.||.+.+...++.++.++...+
T Consensus 152 KIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~M 231 (786)
T KOG0588|consen 152 KIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEM 231 (786)
T ss_pred eeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccC
Confidence 999999999888888889999999999999998764 889999999999999999999999999999999999988766
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
+ ..+|.++++||.+||..||++|+|..+|++|||+.....
T Consensus 232 P----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~ 271 (786)
T KOG0588|consen 232 P----SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS 271 (786)
T ss_pred C----CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence 6 569999999999999999999999999999999987654
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-55 Score=403.27 Aligned_cols=258 Identities=29% Similarity=0.531 Sum_probs=221.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|+.+.++|+|+||.||+|+++.||+.||||++..+.. .+...+-..+||++|++|. |||+|.++++|.....+++|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed-d~~VkKIAlREIrmLKqLk-H~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED-DPVVKKIALREIRMLKQLK-HENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCc-cHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHhcceeEEE
Confidence 368888999999999999999999999999999865432 3445566789999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+|||+. ++++.|... ...++++.+..+++|++.|+.|||++++|||||||+|||++ .++.
T Consensus 80 FE~~dh-TvL~eLe~~----------------p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit---~~gv 139 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERY----------------PNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT---QNGV 139 (396)
T ss_pred eeecch-HHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe---cCCc
Confidence 999964 566655432 35688999999999999999999999999999999999999 5899
Q ss_pred eeEEecCCCcccC-CCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh---
Q 008127 256 LKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--- 329 (577)
Q Consensus 256 vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~--- 329 (577)
+||||||+|+.+. ++..++.++.|.||+|||.+.| +|++++||||+||++.||++|.+.|.+.+.-+.+..|..
T Consensus 140 vKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG 219 (396)
T KOG0593|consen 140 VKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLG 219 (396)
T ss_pred EEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHc
Confidence 9999999999887 7888999999999999998876 689999999999999999999999999887766655432
Q ss_pred -----------CCCCCC-------------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 330 -----------NKPDFR-------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 330 -----------~~~~~~-------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
..+-|. ...+|.++.-+.+|+++||+.||.+|++.+++|.||||..
T Consensus 220 ~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 220 NLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred ccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 221111 1124567888999999999999999999999999999954
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-53 Score=429.34 Aligned_cols=259 Identities=38% Similarity=0.717 Sum_probs=231.9
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc--hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL--PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~--~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
....|.+++.||+|+||+|+.|.+..+|..||||++.+..... ....+.+.+|+.+++++..||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 3457999999999999999999999999999999877652211 12355677999999999779999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||.||+|++++.. .++++|..++.++.||+.|++|||++||+||||||+|||++.
T Consensus 95 ~~ivmEy~~gGdL~~~i~~-----------------~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~-- 155 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN-----------------KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDG-- 155 (370)
T ss_pred EEEEEEecCCccHHHHHHH-----------------cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecC--
Confidence 9999999999999998854 388999999999999999999999999999999999999994
Q ss_pred CC-CCeeEEecCCCccc-CCCCCccccccCCccccchhcccC--C-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 252 ED-SSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRK--S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~-~~vkl~DFGla~~~-~~~~~~~~~~gt~~y~aPE~~~~~--~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ +++||+|||++... .......+.|||+.|+|||++.+. | +.++||||+||+||.|++|+.||.+.+...++..
T Consensus 156 -~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k 234 (370)
T KOG0583|consen 156 -NEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK 234 (370)
T ss_pred -CCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 4 89999999999988 456677899999999999999874 4 6899999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCC-CHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 327 VLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~-s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
|..+...++. .+ |+++.+|+.+||..||.+|+|+.+++.||||+..
T Consensus 235 i~~~~~~~p~----~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~~ 281 (370)
T KOG0583|consen 235 IRKGEFKIPS----YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQKE 281 (370)
T ss_pred HhcCCccCCC----CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhccC
Confidence 8888766654 34 9999999999999999999999999999999973
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-54 Score=396.85 Aligned_cols=266 Identities=32% Similarity=0.620 Sum_probs=242.5
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc-----CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEE
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM-----ILPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-----~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 166 (577)
+.+-..|.-.+.||.|..+.|.++.++.+|..+|+|+|..... ......+.-.+|+.||+++.+||+|+++.++|
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 3445568888899999999999999999999999999854221 12234566789999999999999999999999
Q ss_pred EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
+.+..+++|+|+|+.|.|+|+|... -.+|+...+.|+.|+++|++|||.++||||||||+|||
T Consensus 93 es~sF~FlVFdl~prGELFDyLts~-----------------VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENIL 155 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTSK-----------------VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENIL 155 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhhh-----------------eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhhee
Confidence 9999999999999999999988654 67899999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-------CCCCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
++ ++.++||+|||+|+.+.+++.....||||+|+|||.+.. +|+..+|+||+|||+|-|+.|.+|||...
T Consensus 156 ld---dn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk 232 (411)
T KOG0599|consen 156 LD---DNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK 232 (411)
T ss_pred ec---cccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH
Confidence 98 588999999999999999999999999999999998753 45788999999999999999999999999
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 320 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..-+++.|+.++..|..+.|.++|..+++||.+||+.||.+|+|++++|.||||....
T Consensus 233 QmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~ 290 (411)
T KOG0599|consen 233 QMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIA 290 (411)
T ss_pred HHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999997643
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-54 Score=419.81 Aligned_cols=263 Identities=32% Similarity=0.530 Sum_probs=225.9
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-e
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-Y 171 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~ 171 (577)
.+.++|.++++||.|+||.||+|+.+.+|..||||.+++.-...+ .-.-.||+..|++|..|||||++.+++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~e--e~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWE--ECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHH--HHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 355789999999999999999999999999999999876543211 2223689999999955999999999999877 9
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||. .+|++.+.. ++..|++..++.|+.||+.||+|+|.+|+.||||||+|||+..
T Consensus 85 L~fVfE~Md-~NLYqLmK~----------------R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~-- 145 (538)
T KOG0661|consen 85 LYFVFEFMD-CNLYQLMKD----------------RNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG-- 145 (538)
T ss_pred EeeeHHhhh-hhHHHHHhh----------------cCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc--
Confidence 999999994 588876643 3688999999999999999999999999999999999999983
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
+..|||+|||+|+.+.....++.++.|.||+|||++. +-|+.+.||||+|||++|+++-++.|.|.++-+.+.+|..
T Consensus 146 -~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~ 224 (538)
T KOG0661|consen 146 -NDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICE 224 (538)
T ss_pred -cceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHH
Confidence 7889999999999999888999999999999999875 4568999999999999999999999999998887777653
Q ss_pred C--CC-----------------CCCC-------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 N--KP-----------------DFRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~--~~-----------------~~~~-------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
- .+ .++. ...+..+.++.++|.+||.+||.+||||.++|+||||+...
T Consensus 225 VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 225 VLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred HhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 1 11 1111 11345788999999999999999999999999999999754
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-51 Score=422.23 Aligned_cols=257 Identities=26% Similarity=0.489 Sum_probs=236.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.++++||+|+||+|+++..+.+++.||||++++.........+....|.+|+.....||.++.++..|+..+++|+|
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 57999999999999999999999999999999999988887788999999999999887899999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+.||++.. .+....|++..++.|+..|+.||.|||++||||||||.+||||+ ..|+
T Consensus 448 mey~~Ggdm~~------------------~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD---~eGh 506 (694)
T KOG0694|consen 448 MEYVAGGDLMH------------------HIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLD---TEGH 506 (694)
T ss_pred EEecCCCcEEE------------------EEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEc---ccCc
Confidence 99999999543 23457899999999999999999999999999999999999999 5899
Q ss_pred eeEEecCCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
|||+|||+++... .+....++||||.|||||++.+ .|+.++|+|||||+||||+.|..||.+.++++++..|+...+.
T Consensus 507 ~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~ 586 (694)
T KOG0694|consen 507 VKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVR 586 (694)
T ss_pred EEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCC
Confidence 9999999998654 5567789999999999999875 5799999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~~ 377 (577)
++. .+|.++.++|+++|.++|++|.. +.+|..||||+...
T Consensus 587 yP~----~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~ 631 (694)
T KOG0694|consen 587 YPR----FLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID 631 (694)
T ss_pred CCC----cccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence 764 48999999999999999999995 58999999999853
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-51 Score=406.32 Aligned_cols=262 Identities=28% Similarity=0.465 Sum_probs=224.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--Ce
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NY 171 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~ 171 (577)
....|+.+++||+|+||.||+|++..||+.||+|++...... +....-..+||.||++| +||||++|.+...+. +.
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK-EGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC-CcchHHHHHHHHHHHhc-CCCcccceeeEEEecCCce
Confidence 445799999999999999999999999999999999876543 33455678999999999 699999999988765 78
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|||+|||+. +|...+. ...-.|++.++..++.||+.||+|||.+||+|||||.+||||+
T Consensus 193 iYlVFeYMdh-DL~GLl~----------------~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid--- 252 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLS----------------SPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID--- 252 (560)
T ss_pred EEEEEecccc-hhhhhhc----------------CCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc---
Confidence 9999999965 6665442 2346799999999999999999999999999999999999999
Q ss_pred CCCCeeEEecCCCcccCCCC--CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
+++.+||+|||||+++.... .++..+-|.||+|||++.| .|+.++|+||.||||.||++|++.|.+.++-+.+..|
T Consensus 253 n~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kI 332 (560)
T KOG0600|consen 253 NNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKI 332 (560)
T ss_pred CCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHH
Confidence 58999999999999776543 4678899999999999876 5799999999999999999999999999999999988
Q ss_pred HhCCCCCCCCCCC-------------------------CCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 328 LRNKPDFRRKPWP-------------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 328 ~~~~~~~~~~~~~-------------------------~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+-........|+ .++..+.+|+..||..||.+|.||.++|+|+||+...
T Consensus 333 fklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p 407 (560)
T KOG0600|consen 333 FKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEP 407 (560)
T ss_pred HHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCC
Confidence 7643332222232 3677889999999999999999999999999996543
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-51 Score=397.46 Aligned_cols=261 Identities=31% Similarity=0.556 Sum_probs=234.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|++++.||.|.-|+||+|..+.++..+|+|++.+..+.......++..|.+||..+ +||.++.||..|+.+.+.|+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeEEE
Confidence 3689999999999999999999999999999999998776666777888999999999 799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.....++ ....|++..++.++.+++.||+|||..|||+|||||+||||. ++|+
T Consensus 156 meyCpGGdL~~LrqkQ---------------p~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr---edGH 217 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQ---------------PGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR---EDGH 217 (459)
T ss_pred EecCCCccHHHHHhhC---------------CCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe---cCCc
Confidence 9999999998755433 678899999999999999999999999999999999999998 6999
Q ss_pred eeEEecCCCcccC----------------------------------C-C----------------------CCcccccc
Q 008127 256 LKATDFGLSDFIK----------------------------------P-G----------------------KKFQDIVG 278 (577)
Q Consensus 256 vkl~DFGla~~~~----------------------------------~-~----------------------~~~~~~~g 278 (577)
|.|+||.|+.... . . .....++|
T Consensus 218 IMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVG 297 (459)
T KOG0610|consen 218 IMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVG 297 (459)
T ss_pred EEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccc
Confidence 9999999874210 0 0 01123689
Q ss_pred CCccccchhcccCC-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccC
Q 008127 279 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 357 (577)
Q Consensus 279 t~~y~aPE~~~~~~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~d 357 (577)
|-.|.|||++.|.. +.++|||+|||++|||++|..||.+.+..+.+.+|+...+.|+.. +.++..++|||+++|.+|
T Consensus 298 ThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~--~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 298 THEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE--PEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred ccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC--CcchhHHHHHHHHHhccC
Confidence 99999999999865 899999999999999999999999999999999999999888776 378899999999999999
Q ss_pred cCCCCC----HHHHhcCccccccC
Q 008127 358 PRARLT----AAQALSHPWVREGG 377 (577)
Q Consensus 358 P~~Rpt----~~~il~hp~f~~~~ 377 (577)
|.+|+. |.||.+||||+...
T Consensus 376 P~kRlg~~rGA~eIK~HpFF~gVn 399 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKRHPFFEGVN 399 (459)
T ss_pred hhhhhccccchHHhhcCccccCCC
Confidence 999998 99999999999854
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-51 Score=373.68 Aligned_cols=260 Identities=31% Similarity=0.493 Sum_probs=222.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|..++.||+|.||.||+|++..||+.||||+|........ ......+||.+|+.+. ||||+.++++|...+.+.||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG-i~~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG-INRTALREIKLLQELK-HPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC-ccHHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEE
Confidence 478899999999999999999999999999999987654322 2345679999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||++. +|...+..+ ...++..++..++.+++.||+|||++.|+||||||.|+|++ .++.
T Consensus 80 fEfm~t-dLe~vIkd~----------------~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis---~~g~ 139 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKDK----------------NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS---SDGQ 139 (318)
T ss_pred EEeccc-cHHHHhccc----------------ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc---CCCc
Confidence 999964 787766543 46799999999999999999999999999999999999998 4899
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||+|+.+.+... ....+-|.+|+|||.+-| .|+..+||||.|||+.||+.|.+-|.+.+.-+.+..|++.-.
T Consensus 140 lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LG 219 (318)
T KOG0659|consen 140 LKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALG 219 (318)
T ss_pred EEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcC
Confidence 99999999998765433 344589999999998865 579999999999999999999999999998888888776433
Q ss_pred CCCCCCC------------------------CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 DFRRKPW------------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~~~~~~~------------------------~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
......| +..+.++.+|+.+||..||.+|+|+.|+|+|+||+...
T Consensus 220 TP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 220 TPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred CCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence 3222333 33566789999999999999999999999999999744
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-51 Score=400.93 Aligned_cols=261 Identities=34% Similarity=0.638 Sum_probs=225.6
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch-----------hhHHHHHHHHHHHHHhcCCCCeeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----------IAVEDVKREVKILQALAGHENVVKF 162 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-----------~~~~~~~~E~~~l~~l~~hpniv~~ 162 (577)
.-+.|++++.||+|.||.|-+|++..+++.||||++.+...... ...+.+.+||.||++| +|||||+|
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nVV~L 173 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNVVKL 173 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCeeEE
Confidence 34579999999999999999999999999999999976543211 1236899999999999 59999999
Q ss_pred EEEEEc--CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCC-CCHHHHHHHHHHHHHHHHHHHhcCceecc
Q 008127 163 YNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR-YTEKDAAVVVRQMLRVAAECHLHGLVHRD 239 (577)
Q Consensus 163 ~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~i~~qil~~l~~LH~~~iiHrD 239 (577)
+++..+ .+.+|||+|||..|.+... ..... +++.+++.|+.+++.||+|||.+||||||
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~------------------p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRD 235 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWC------------------PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRD 235 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccC------------------CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence 999986 4679999999999987541 23344 99999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCeeEEecCCCcccCCC------CCccccccCCccccchhccc---CC--CCCCchhhHHHHHHHH
Q 008127 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPG------KKFQDIVGSAYYVAPEVLKR---KS--GPESDVWSIGVITYIL 308 (577)
Q Consensus 240 lKp~NILl~~~~~~~~vkl~DFGla~~~~~~------~~~~~~~gt~~y~aPE~~~~---~~--~~~~DiwSlG~il~el 308 (577)
|||+|+||+ .+++|||+|||.+.....+ ..+...+|||.|+|||++.+ .. +.+.||||+||+||+|
T Consensus 236 IKPsNLLl~---~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCl 312 (576)
T KOG0585|consen 236 IKPSNLLLS---SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCL 312 (576)
T ss_pred cchhheEEc---CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHh
Confidence 999999998 4799999999998765322 12345789999999998765 22 6789999999999999
Q ss_pred HhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 309 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 309 ~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
+.|+.||.+....+++.+|......++.. +.+.+.+++||++||++||++|+++.+|..|||....+.
T Consensus 313 lfG~~PF~~~~~~~l~~KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 313 LFGQLPFFDDFELELFDKIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred hhccCCcccchHHHHHHHHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 99999999999999999999988877764 467899999999999999999999999999999987643
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-52 Score=384.76 Aligned_cols=256 Identities=30% Similarity=0.533 Sum_probs=221.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEE-EEEcCCe-EE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYN-AFEDDNY-VY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~-~~~~~~~-~~ 173 (577)
..|+|+++||.|+||+||++.+..+|..||.|.+.-..+ .....+....|+.+|++| +|||||++++ .|..++. ++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m-d~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM-DAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc-cHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhccchhhH
Confidence 469999999999999999999999999999999985443 456788899999999999 5999999998 5655555 99
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh--cC--ceeccCCCCcEEeec
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL--HG--LVHRDMKPENFLFKS 249 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~--~~--iiHrDlKp~NILl~~ 249 (577)
||||||.+|+|...+.. +.+....+++..+|.++.|++.||..||+ .. |+||||||.||+|+
T Consensus 97 ivmE~c~~GDLsqmIk~-------------~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~- 162 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKH-------------FKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT- 162 (375)
T ss_pred HHHHhhcccCHHHHHHH-------------HHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc-
Confidence 99999999999988753 23456889999999999999999999999 44 99999999999999
Q ss_pred CCCCCCeeEEecCCCcccCCCCCc-cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~-~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.++.|||+|||+++++.....+ .+.+|||.||+||++.+ .|+.++||||+||++|||+.-.+||.+.+-.++..+|
T Consensus 163 --~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI 240 (375)
T KOG0591|consen 163 --ANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKI 240 (375)
T ss_pred --CCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHH
Confidence 5899999999999998765544 57899999999998764 6799999999999999999999999999988888888
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
..+.. ++-+-...|..+..||..|+..||..||+. +|++...
T Consensus 241 ~qgd~--~~~p~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di 282 (375)
T KOG0591|consen 241 EQGDY--PPLPDEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQDI 282 (375)
T ss_pred HcCCC--CCCcHHHhhhHHHHHHHHHccCCcccCCCc-----chHHHHH
Confidence 88743 222224578999999999999999999987 5665543
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-51 Score=371.17 Aligned_cols=257 Identities=32% Similarity=0.621 Sum_probs=235.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|.||.||+|+.++++-.||+|++.++..........+.+|++|-..|+ ||||+++|++|.+...+|++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~-hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR-HPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC-CccHHhhhhheeccceeEEE
Confidence 46999999999999999999999999999999999887666666788999999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||.++|+|+..|... +..++++..++.++.|++.||.|+|..+||||||||+|+|++. .+.
T Consensus 101 lEya~~gel~k~L~~~---------------~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~---~~~ 162 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEG---------------RMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS---AGE 162 (281)
T ss_pred EEecCCchHHHHHHhc---------------ccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC---CCC
Confidence 9999999999877533 4578999999999999999999999999999999999999984 778
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccCC-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||.+.... .....+.|||..|.|||+..+.. +..+|+|++|++.||++.|.+||..++..+.++.|.+....+
T Consensus 163 lkiAdfGwsV~~p-~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~ 241 (281)
T KOG0580|consen 163 LKIADFGWSVHAP-SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKF 241 (281)
T ss_pred eeccCCCceeecC-CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccC
Confidence 9999999998765 45567889999999999998764 889999999999999999999999999999999999887766
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
+ +.++.++.|+|.+||.++|.+|.+..+++.|||+...
T Consensus 242 p----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 242 P----STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred C----cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 5 5789999999999999999999999999999998754
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-51 Score=407.99 Aligned_cols=255 Identities=29% Similarity=0.558 Sum_probs=230.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.+.+.||+|+||.||+|+.+.|.+.||+|.+.+... .......+.+|++|++.|+ |||||.++++|+...++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLK-HPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcC-CcchhhHHHhhcccceEEEE
Confidence 468899999999999999999999999999999987653 3456788999999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+|||.| +|...|.+ +..++|+.++.++.+++.||.|||+++|+|||+||.|||+. .+++
T Consensus 80 te~a~g-~L~~il~~-----------------d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~---~~~~ 138 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQ-----------------DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLE---KGGT 138 (808)
T ss_pred ehhhhh-hHHHHHHh-----------------ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeec---CCCc
Confidence 999976 99887754 48899999999999999999999999999999999999998 5899
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+|+||||+|+.+..+.. .....|||.|||||++.+. |+..+|+||||||+|||++|++||...+..++.+.|+.....
T Consensus 139 ~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~ 218 (808)
T KOG0597|consen 139 LKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVK 218 (808)
T ss_pred eeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCC
Confidence 99999999998765543 4567899999999998865 588999999999999999999999999999999999887665
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
++ +..|..+..|++.+|.+||.+|+|..+++.|||.+...
T Consensus 219 ~p----~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~ 258 (808)
T KOG0597|consen 219 PP----STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI 258 (808)
T ss_pred Cc----ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence 44 46899999999999999999999999999999998743
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-50 Score=377.86 Aligned_cols=260 Identities=28% Similarity=0.425 Sum_probs=218.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~ 173 (577)
+.|+.+..|++|+||.||+|+++.|++.||+|+++......... -...+||.+|.+++ |||||.+-++... -+.+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFP-ItsLREIniLl~~~-H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFP-ITSLREINILLKAR-HPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCc-chhHHHHHHHHhcC-CCCeeeeEEEEeccccceee
Confidence 46999999999999999999999999999999997665332222 23478999999995 9999999998864 35699
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||||||+. +|...+.. -..+|+..+++.++.|++.||.|||.+.|+||||||+|+|++ ..
T Consensus 154 ~VMe~~Eh-DLksl~d~----------------m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~---~~ 213 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMET----------------MKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS---HK 213 (419)
T ss_pred eeHHHHHh-hHHHHHHh----------------ccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec---cC
Confidence 99999964 66554432 136899999999999999999999999999999999999998 58
Q ss_pred CCeeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 254 SSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
|.+||+|||+|+.+... ..++..+-|.||+|||++.+ .|++++|+||+|||+.||+++++.|.+.++.+.+..|...
T Consensus 214 G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~l 293 (419)
T KOG0663|consen 214 GILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKL 293 (419)
T ss_pred CcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHH
Confidence 99999999999987654 45677899999999998876 4689999999999999999999999999999988888753
Q ss_pred CCCCCCCCCCC----------------------------CCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 331 KPDFRRKPWPS----------------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 331 ~~~~~~~~~~~----------------------------~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
-.......||+ ++....+|+..+|.+||.+|.||.++|+|+||++..
T Consensus 294 lGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P 368 (419)
T KOG0663|consen 294 LGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP 368 (419)
T ss_pred hCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence 22222222221 457788999999999999999999999999999854
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-49 Score=387.67 Aligned_cols=264 Identities=28% Similarity=0.478 Sum_probs=230.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|++...||.|.-++||+|++..++..||||++...++.. ..+.+.+|+..|+.+ +||||++++..|..+..+|+|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLI-DHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhc-CCCCcceEEEEEEecceeEEe
Confidence 47999999999999999999999999999999998877643 478999999999888 699999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|.||.+|++++.+.... ...++|..++.|+++++.||.|||.+|.||||||+.||||+ .+|.
T Consensus 103 mpfMa~GS~ldIik~~~---------------~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~---~dG~ 164 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYY---------------PDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILID---SDGT 164 (516)
T ss_pred ehhhcCCcHHHHHHHHc---------------cccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEc---CCCc
Confidence 99999999999886542 24589999999999999999999999999999999999999 4899
Q ss_pred eeEEecCCCcccCCC-C----CccccccCCccccchhcc---cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 256 LKATDFGLSDFIKPG-K----KFQDIVGSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~----~~~~~~gt~~y~aPE~~~---~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
|||+|||.+..+... . ++++++||++|||||++. .+|+.|+||||||++.+||++|..||....+..++...
T Consensus 165 VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t 244 (516)
T KOG0582|consen 165 VKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT 244 (516)
T ss_pred EEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH
Confidence 999999987654332 2 135679999999999964 46899999999999999999999999999998888888
Q ss_pred HhCCCCCC------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCC
Q 008127 328 LRNKPDFR------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380 (577)
Q Consensus 328 ~~~~~~~~------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~ 380 (577)
+.+.+..+ ......++..++.+|..||.+||.+||||+++|+|+||+......
T Consensus 245 Lqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~ 303 (516)
T KOG0582|consen 245 LQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKE 303 (516)
T ss_pred hcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchh
Confidence 88776422 222234677899999999999999999999999999999865543
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-50 Score=403.92 Aligned_cols=260 Identities=31% Similarity=0.544 Sum_probs=225.9
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.+....|....+||+|+.|.||.|+...+++.||||++..... ...+-+.+|+.+|+.+. |||||.+++.|...+.
T Consensus 269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q---~~keLilnEi~Vm~~~~-H~NiVnfl~Sylv~de 344 (550)
T KOG0578|consen 269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ---PKKELLLNEILVMRDLH-HPNIVNFLDSYLVGDE 344 (550)
T ss_pred CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC---CchhhhHHHHHHHHhcc-chHHHHHHHHhcccce
Confidence 4455679999999999999999999999999999999987653 24566899999999995 9999999999998899
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+||||++||+|.|.+. ...++|.+++.|+.+++.||+|||.+||||||||.+|||++
T Consensus 345 LWVVMEym~ggsLTDvVt------------------~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~--- 403 (550)
T KOG0578|consen 345 LWVVMEYMEGGSLTDVVT------------------KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT--- 403 (550)
T ss_pred eEEEEeecCCCchhhhhh------------------cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec---
Confidence 999999999999988663 34589999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH-
Q 008127 252 EDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL- 328 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~- 328 (577)
.++.|||+|||++..+.... ...+.+|||.|||||+... .|++++||||||++++||+-|.+||...++-.-+..|.
T Consensus 404 ~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ 483 (550)
T KOG0578|consen 404 MDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT 483 (550)
T ss_pred cCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh
Confidence 57889999999998776544 5567899999999998875 67999999999999999999999998766655444443
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+.+.+. .+..+|+++++||.+||+.||.+|++|.++|+||||+....
T Consensus 484 ng~P~lk--~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p 531 (550)
T KOG0578|consen 484 NGTPKLK--NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKP 531 (550)
T ss_pred cCCCCcC--CccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCC
Confidence 3444433 34679999999999999999999999999999999965543
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-50 Score=388.17 Aligned_cols=256 Identities=32% Similarity=0.611 Sum_probs=237.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
...+|++.+.||+|.||+|-+|++...|+.||||.|.+......+..-.+++||+||..| +||||+.+|++|+..+.+.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENkdKIv 129 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENKDKIV 129 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCCceEE
Confidence 456899999999999999999999999999999999999888888889999999999999 6999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
|||||..+|+|+|++... +.|++.+++.++.||..|+.|||.++++|||||.+||||+ .+
T Consensus 130 ivMEYaS~GeLYDYiSer-----------------~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD---~N 189 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISER-----------------GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLD---QN 189 (668)
T ss_pred EEEEecCCccHHHHHHHh-----------------ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeec---CC
Confidence 999999999999988544 8899999999999999999999999999999999999999 58
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+++||+|||++..+....-.+++||+|.|.+||+++|.+ ++.+|-|||||+||.|+.|.+||.+.+...+.++|.++.
T Consensus 190 ~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~Ga 269 (668)
T KOG0611|consen 190 NNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGA 269 (668)
T ss_pred CCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccc
Confidence 899999999999998888889999999999999999875 789999999999999999999999999999999998875
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
..-+ .-+..+.-||+.||..||++|.|+.+|-.|=|+.-
T Consensus 270 YrEP-----~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 270 YREP-----ETPSDASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred ccCC-----CCCchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 4322 34567889999999999999999999999999764
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-50 Score=382.47 Aligned_cols=268 Identities=32% Similarity=0.551 Sum_probs=222.1
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED---- 168 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~---- 168 (577)
.+..+|..++.||.|+||.|..|.++.+|+.||||++... +......+...+|+.+|+.++ |+||+.+++++..
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRPPSRD 96 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhc-CCCcceEEeeccccccc
Confidence 3456787789999999999999999999999999998632 223456778899999999996 9999999999875
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
-+.+|+|+|+| +-+|...+. .+..+++.++..+++||++||.|+|+.+|+||||||.|+|+
T Consensus 97 ~f~DvYiV~elM-etDL~~iik-----------------~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~ 158 (359)
T KOG0660|consen 97 KFNDVYLVFELM-ETDLHQIIK-----------------SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL 158 (359)
T ss_pred ccceeEEehhHH-hhHHHHHHH-----------------cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee
Confidence 35799999999 456665553 23559999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCC---CCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKP---GKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~---~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
+ .+..+||||||+|+.... ....+.++.|.+|+|||++. ..|+.++||||+|||+.||++|++.|.|.+.-.
T Consensus 159 n---~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~ 235 (359)
T KOG0660|consen 159 N---ADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVH 235 (359)
T ss_pred c---cCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHH
Confidence 8 478899999999998754 34457789999999999764 467899999999999999999999998877655
Q ss_pred HHHHHH-----------------------hCCCCCCCCC----CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 323 IFKEVL-----------------------RNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 323 ~~~~i~-----------------------~~~~~~~~~~----~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.+..|+ +..+..+..+ ++..++.+.+|+.+||..||.+|+|++|+|+||||..
T Consensus 236 Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 236 QLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP 315 (359)
T ss_pred HHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence 444433 2233333322 4678999999999999999999999999999999998
Q ss_pred cCCCCCCc
Q 008127 376 GGDASEIP 383 (577)
Q Consensus 376 ~~~~~~~~ 383 (577)
.-.....|
T Consensus 316 ~hdp~dEP 323 (359)
T KOG0660|consen 316 YHDPEDEP 323 (359)
T ss_pred hcCCccCC
Confidence 76544433
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-50 Score=391.66 Aligned_cols=258 Identities=34% Similarity=0.570 Sum_probs=215.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC--eEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--YVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--~~~l 174 (577)
++..++.||+|+||.||++.+..+|..+|||.+..... + ..+.+.+|+.+|.+|+ |||||++++...... .++|
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~--~-~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS--P-TSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccc--h-hHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeeeEe
Confidence 57888999999999999999999999999999876532 1 2677999999999996 999999999755444 6999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
.|||+++|+|.+.+... ...+++..++.++.||++||.|||++|||||||||+|||++. .++
T Consensus 94 ~mEy~~~GsL~~~~~~~----------------g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~--~~~ 155 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRY----------------GGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDP--SNG 155 (313)
T ss_pred eeeccCCCcHHHHHHHc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeC--CCC
Confidence 99999999999987544 127999999999999999999999999999999999999983 258
Q ss_pred CeeEEecCCCcccCC----CCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCC-CChhHHHHHH
Q 008127 255 SLKATDFGLSDFIKP----GKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEV 327 (577)
Q Consensus 255 ~vkl~DFGla~~~~~----~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~-~~~~~~~~~i 327 (577)
.+||+|||++..... ........||+.|||||++.... ..++|||||||++.||+||++||.. ....+.+..+
T Consensus 156 ~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~i 235 (313)
T KOG0198|consen 156 DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLI 235 (313)
T ss_pred eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHH
Confidence 999999999987663 12234578999999999988543 3499999999999999999999987 3444444444
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.... ..+ .....+|.++++||.+|+..||++||||.++|.|||.+....
T Consensus 236 g~~~-~~P-~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 236 GRED-SLP-EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred hccC-CCC-CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 4443 112 333569999999999999999999999999999999987543
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-49 Score=388.95 Aligned_cols=266 Identities=32% Similarity=0.638 Sum_probs=242.6
Q ss_pred cccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
++..+..-|.+.+.||+|.|+.|-+|++.-||..||||+|.+.++. ......+.+|++.|+.++ |||||++|++....
T Consensus 12 ~DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD-~~st~hlfqEVRCMKLVQ-HpNiVRLYEViDTQ 89 (864)
T KOG4717|consen 12 YDGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD-TLSTGHLFQEVRCMKLVQ-HPNIVRLYEVIDTQ 89 (864)
T ss_pred cccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccc-hhhhhHHHHHHHHHHHhc-CcCeeeeeehhccc
Confidence 3455667799999999999999999999999999999999998764 345677899999999885 99999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
..+|+|+|+-.+|+|+|+|+.. ...+.+..+..++.||+.|+.|||...+|||||||+|+.+-.
T Consensus 90 TKlyLiLELGD~GDl~DyImKH----------------e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE 153 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKH----------------EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE 153 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhh----------------hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee
Confidence 9999999999999999999765 477999999999999999999999999999999999999874
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-C-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
+-|.|||+|||++..+.++....+.||+..|.|||++.|. | .+++||||||||||.|++|++||+..+..+.+..|
T Consensus 154 --KlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmI 231 (864)
T KOG4717|consen 154 --KLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMI 231 (864)
T ss_pred --ecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhh
Confidence 6799999999999999999999999999999999988764 4 67899999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
+..+...+ ..+|.++++||..||..||++|.+.++|..|+|++.....
T Consensus 232 mDCKYtvP----shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~ 279 (864)
T KOG4717|consen 232 MDCKYTVP----SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRG 279 (864)
T ss_pred hcccccCc----hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCC
Confidence 98776655 4589999999999999999999999999999999986643
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-48 Score=385.81 Aligned_cols=260 Identities=27% Similarity=0.430 Sum_probs=216.7
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|++.+.||+|+||.||+|.+..+|+.||||.+.+...........+.+|+.++..+ +||||+++++++.+.+.+++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEEEEE
Confidence 78899999999999999999999999999998765433333445678999999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
||++|+|.+.+... ....+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+|
T Consensus 81 ~~~~g~L~~~~~~~---------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~---~~~~~k 142 (285)
T cd05631 81 IMNGGDLKFHIYNM---------------GNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD---DRGHIR 142 (285)
T ss_pred ecCCCcHHHHHHhh---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEE
Confidence 99999998766432 234689999999999999999999999999999999999998 478899
Q ss_pred EEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008127 258 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336 (577)
Q Consensus 258 l~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~ 336 (577)
|+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+.........
T Consensus 143 l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 222 (285)
T cd05631 143 ISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQE 222 (285)
T ss_pred EeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccc
Confidence 999999987655444556689999999998865 5688999999999999999999999876553333332221111122
Q ss_pred CCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 337 KPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 337 ~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
.....+++++.+||.+||..||.+||+ ++++++||||+..
T Consensus 223 ~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 223 EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 223468899999999999999999997 8999999999874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-49 Score=366.47 Aligned_cols=267 Identities=33% Similarity=0.629 Sum_probs=236.7
Q ss_pred cccceeee-eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----
Q 008127 94 FDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED---- 168 (577)
Q Consensus 94 ~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~---- 168 (577)
+.++|.+. ++||-|-.|+|..+.++.||+.+|+|++... ...++|+++.-....|||||.++++|+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 55678876 4899999999999999999999999988533 3457888887777789999999999863
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...+.+|||.++||+|+..+..+ ....|+|.++..|+.||..|+.|||+.+|.||||||+|+|..
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~---------------g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt 195 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDR---------------GDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYT 195 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHc---------------ccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeee
Confidence 56789999999999999988655 456799999999999999999999999999999999999999
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCC----ChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK----TEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~----~~~~~ 323 (577)
....+..+||+|||+|+.........+.|-||.|.|||++.. +|+..+|+||+||++|.|++|.+||+.. ....+
T Consensus 196 ~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgM 275 (400)
T KOG0604|consen 196 TTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 275 (400)
T ss_pred cCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhH
Confidence 877889999999999998776677788899999999999974 6788899999999999999999999764 34567
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCCc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~~ 383 (577)
...|..+...|+.+.|..+|+.++++|+.+|..+|.+|.|+.+++.|||+.....-...+
T Consensus 276 k~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tp 335 (400)
T KOG0604|consen 276 KRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTP 335 (400)
T ss_pred HhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCC
Confidence 888999999999999999999999999999999999999999999999998765443333
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-48 Score=394.62 Aligned_cols=254 Identities=31% Similarity=0.565 Sum_probs=222.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++.+.||+|+||.||+|+++.+|+.||||++.+.........+.+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCEEEEE
Confidence 4699999999999999999999999999999998765433334567789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||++|+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 97 ~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~ 156 (329)
T PTZ00263 97 LEFVVGGELFTHLRK-----------------AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD---NKGH 156 (329)
T ss_pred EcCCCCChHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC---CCCC
Confidence 999999999887743 36789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||++...... ....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+..+...+
T Consensus 157 ~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~ 234 (329)
T PTZ00263 157 VKVTDFGFAKKVPDR--TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKF 234 (329)
T ss_pred EEEeeccCceEcCCC--cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCC
Confidence 999999999866432 2346899999999988754 5889999999999999999999999888888888887765443
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
+ ..++..+.+||.+||+.||.+||+ +.+++.||||+..
T Consensus 235 p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 235 P----NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred C----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 3 247889999999999999999997 7999999999863
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-48 Score=388.81 Aligned_cols=253 Identities=28% Similarity=0.528 Sum_probs=221.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+ +||||+++++++.+.+.+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEEEE
Confidence 689999999999999999999999999999998765432333456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~---~~~~~ 140 (291)
T cd05612 81 EYVPGGELFSYLRN-----------------SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD---KEGHI 140 (291)
T ss_pred eCCCCCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCE
Confidence 99999999887743 36789999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
||+|||++...... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+......++
T Consensus 141 kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 218 (291)
T cd05612 141 KLTDFGFAKKLRDR--TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFP 218 (291)
T ss_pred EEEecCcchhccCC--cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCC
Confidence 99999999876432 2345799999999988754 58899999999999999999999999888888888887765544
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
..+++.+.+||++||+.||.+||+ +.++++||||+..
T Consensus 219 ----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 219 ----RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred ----ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 346889999999999999999995 9999999999763
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-48 Score=397.71 Aligned_cols=259 Identities=27% Similarity=0.467 Sum_probs=219.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+.++..+ +||||+++++.+.+...+|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEEE
Confidence 3689999999999999999999999999999999765433334556788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 80 ~E~~~gg~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~---~~~~ 139 (363)
T cd05628 80 MEFLPGGDMMTLLMK-----------------KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD---SKGH 139 (363)
T ss_pred EcCCCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCC
Confidence 999999999887743 36789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCC------------------------------------CccccccCCccccchhccc-CCCCCCch
Q 008127 256 LKATDFGLSDFIKPGK------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDV 298 (577)
Q Consensus 256 vkl~DFGla~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Di 298 (577)
+||+|||+++...... .....+||+.|+|||++.+ .++.++||
T Consensus 140 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~Dv 219 (363)
T cd05628 140 VKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDW 219 (363)
T ss_pred EEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhh
Confidence 9999999987543211 0124589999999998865 46889999
Q ss_pred hhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcC---CCCCHHHHhcCccccc
Q 008127 299 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR---ARLTAAQALSHPWVRE 375 (577)
Q Consensus 299 wSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~---~Rpt~~~il~hp~f~~ 375 (577)
|||||++|+|++|+.||.+.+..+.+..+.........+....+++++.+||.+|+. +|. .||++.++++||||+.
T Consensus 220 wSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~ 298 (363)
T cd05628 220 WSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEG 298 (363)
T ss_pred hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCC
Confidence 999999999999999999988888888887654433333334578999999999776 444 4589999999999986
Q ss_pred c
Q 008127 376 G 376 (577)
Q Consensus 376 ~ 376 (577)
.
T Consensus 299 ~ 299 (363)
T cd05628 299 V 299 (363)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-48 Score=392.19 Aligned_cols=250 Identities=30% Similarity=0.537 Sum_probs=217.3
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.++.+|+.||||++.+...........+.+|+.+++++ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999765433334556788999999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+.+.. ...+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+||
T Consensus 80 ~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~---~~~~~kl~Df 139 (323)
T cd05571 80 GELFFHLSR-----------------ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD---KDGHIKITDF 139 (323)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEeeC
Confidence 999887643 36789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|+++... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+......++
T Consensus 140 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p---- 215 (323)
T cd05571 140 GLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---- 215 (323)
T ss_pred CCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 9987542 2233445689999999999865 468999999999999999999999998888888777776655443
Q ss_pred CCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..+++++.+||.+||..||++|| ++.++++||||+..
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 45789999999999999999999 89999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-48 Score=395.40 Aligned_cols=263 Identities=31% Similarity=0.450 Sum_probs=220.3
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCC-----CCeeEEEEEE
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-----ENVVKFYNAF 166 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-----pniv~~~~~~ 166 (577)
+.+..+|.|.+.||+|+||+|.+|.+..|++.||||+++... ....+...|+.+|..|..| -|||+++++|
T Consensus 182 d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F 257 (586)
T KOG0667|consen 182 DHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF 257 (586)
T ss_pred ceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence 335558999999999999999999999999999999997664 3556677899999999623 4899999999
Q ss_pred EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
...+++|||+|++ .-+|+++++.+ +...|+...++.++.||+.||.+||+.+|||+||||||||
T Consensus 258 ~fr~HlciVfELL-~~NLYellK~n---------------~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENIL 321 (586)
T KOG0667|consen 258 YFRNHLCIVFELL-STNLYELLKNN---------------KFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENIL 321 (586)
T ss_pred ccccceeeeehhh-hhhHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhhee
Confidence 9999999999999 56999988765 5677999999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
|...+ ...|||+|||+|++... ...+++.+..|+|||++.| .|+.++||||||||++||++|.+.|.+.++.+.+.
T Consensus 322 L~~~~-r~~vKVIDFGSSc~~~q--~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~ 398 (586)
T KOG0667|consen 322 LKDPK-RSRIKVIDFGSSCFESQ--RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLA 398 (586)
T ss_pred eccCC-cCceeEEecccccccCC--cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHH
Confidence 98754 45999999999998653 3348899999999998765 67999999999999999999999999999888777
Q ss_pred HHHhCC---------------------CCCCC--------------------------CCCC-C-----------CCHHH
Q 008127 326 EVLRNK---------------------PDFRR--------------------------KPWP-S-----------ISNSA 346 (577)
Q Consensus 326 ~i~~~~---------------------~~~~~--------------------------~~~~-~-----------~s~~~ 346 (577)
.|+.-- ..++. ...| . -...+
T Consensus 399 ~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F 478 (586)
T KOG0667|consen 399 RIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLF 478 (586)
T ss_pred HHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHH
Confidence 664300 00000 0001 0 11357
Q ss_pred HHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 347 KDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 347 ~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+||++||.+||.+|+|+.++|+||||+...
T Consensus 479 ~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 479 IDFLKRCLEWDPAERITPAQALNHPFLTGTS 509 (586)
T ss_pred HHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence 8999999999999999999999999999543
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-48 Score=372.17 Aligned_cols=260 Identities=30% Similarity=0.527 Sum_probs=219.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CC---
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DN--- 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~--- 170 (577)
-.|.-.+++|+|+||.||+|....+++.||||++-..... -.+|+.+|+.+ +|||||++.-+|.. +.
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-------knrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-------KNRELQIMRKL-DHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-------CcHHHHHHHhc-CCcCeeeEEEEEEecCCCchh
Confidence 3688899999999999999999999999999988654322 24799999988 69999999988863 22
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
++.+||||+|. +|...+... ...+..++.-.++.+++||++||.|||+.||+||||||.|+|++.
T Consensus 96 ~lnlVleymP~-tL~~~~r~~-------------~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~- 160 (364)
T KOG0658|consen 96 YLNLVLEYMPE-TLYRVIRHY-------------TRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP- 160 (364)
T ss_pred HHHHHHHhchH-HHHHHHHHH-------------hhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC-
Confidence 45689999974 788777532 234578899999999999999999999999999999999999996
Q ss_pred CCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+.+.+||||||.|+.+..++....+..|..|+|||.+.| .|+.++||||.|||+.||+-|++.|.|.+..+.+..|+
T Consensus 161 -~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIi 239 (364)
T KOG0658|consen 161 -DTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEII 239 (364)
T ss_pred -CCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHH
Confidence 679999999999999988887788999999999998865 57999999999999999999999999988877777665
Q ss_pred hC------------C--------CCCCCCCC-----CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 329 RN------------K--------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 329 ~~------------~--------~~~~~~~~-----~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
+- . +.+....| ...++++.+|+.++|.++|.+|.++.+++.||||.+....
T Consensus 240 k~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 240 KVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred HHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 41 1 11112222 3478899999999999999999999999999999987654
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=396.83 Aligned_cols=258 Identities=31% Similarity=0.554 Sum_probs=221.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++++.||+|+||.||+|++..+|+.||||++.+...........+.+|+.++..+ +||||++++++|.+++.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEEEE
Confidence 699999999999999999999999999999999765433334556788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~~g~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~~ 140 (364)
T cd05599 81 EYLPGGDMMTLLMKK-----------------DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD---AKGHI 140 (364)
T ss_pred CCCCCcHHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCE
Confidence 999999998877432 5689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC---------------------------------------CccccccCCccccchhccc-CCCCCC
Q 008127 257 KATDFGLSDFIKPGK---------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPES 296 (577)
Q Consensus 257 kl~DFGla~~~~~~~---------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~ 296 (577)
||+|||++..+.... .....+||+.|+|||++.+ .++.++
T Consensus 141 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 220 (364)
T cd05599 141 KLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKEC 220 (364)
T ss_pred EEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCee
Confidence 999999986542211 0113479999999998765 468999
Q ss_pred chhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC---HHHHhcCccc
Q 008127 297 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWV 373 (577)
Q Consensus 297 DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt---~~~il~hp~f 373 (577)
|||||||++|+|++|..||.+.+..+.+..++.....+..+....+++++.+||.+||. +|.+|++ +.++++||||
T Consensus 221 DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~ 299 (364)
T cd05599 221 DWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFF 299 (364)
T ss_pred eeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCc
Confidence 99999999999999999999888888888877655444433334578999999999997 8999998 9999999999
Q ss_pred ccc
Q 008127 374 REG 376 (577)
Q Consensus 374 ~~~ 376 (577)
+..
T Consensus 300 ~~~ 302 (364)
T cd05599 300 KGV 302 (364)
T ss_pred CCC
Confidence 864
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-47 Score=390.09 Aligned_cols=257 Identities=32% Similarity=0.525 Sum_probs=221.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|++..+|+.||||++.+...........+.+|+.++..+. ||||+++++++...+.+|+||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK-SEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC-CCCCccEEEEEEcCCEEEEEE
Confidence 6999999999999999999999999999999997654332334567889999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 e~~~g~~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~ 140 (333)
T cd05600 81 EYVPGGDFRTLLNN-----------------LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID---ASGHI 140 (333)
T ss_pred eCCCCCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCE
Confidence 99999999887743 35789999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+........
T Consensus 141 kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 218 (333)
T cd05600 141 KLTDFGLSKGIVT--YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ 218 (333)
T ss_pred EEEeCcCCccccc--ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc
Confidence 9999999986543 3345689999999998865 468899999999999999999999998888877777765433322
Q ss_pred CCCC----CCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 336 RKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 336 ~~~~----~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+.+ ..++.++.+||.+||..+|.+||++.++++||||+..
T Consensus 219 ~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 219 RPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred CCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 2222 2568999999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-47 Score=390.51 Aligned_cols=254 Identities=31% Similarity=0.557 Sum_probs=221.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC-CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
++|.+.+.||+|+||.||+|.+..++ ..||+|.+.+.........+.+.+|+.+++.+ +||||+++++++.+++.+|+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEeCCEEEE
Confidence 46999999999999999999876655 68999998765433334566788999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 109 v~Ey~~~g~L~~~i~~-----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~ 168 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR-----------------NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD---KDG 168 (340)
T ss_pred EEeCCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCC
Confidence 9999999999887643 36789999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
.+||+|||++...... ....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+....+..+..+...
T Consensus 169 ~ikL~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~ 246 (340)
T PTZ00426 169 FIKMTDFGFAKVVDTR--TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIY 246 (340)
T ss_pred CEEEecCCCCeecCCC--cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC
Confidence 9999999999876432 2456899999999998654 588999999999999999999999998888888888776544
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
++ +.+++.+.++|++||..||.+|+ |++++++||||+..
T Consensus 247 ~p----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 247 FP----KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred CC----CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 33 45789999999999999999995 89999999999864
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-47 Score=394.87 Aligned_cols=259 Identities=30% Similarity=0.464 Sum_probs=217.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++++.||+|+||+||+|++..+++.||||++.+...........+.+|+.+++.+ +||||+++++++.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEEEE
Confidence 589999999999999999999999999999999765544444567789999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||+||+|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+
T Consensus 81 E~~~gg~L~~~l~~~-----------------~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~---~~~~~ 140 (381)
T cd05626 81 DYIPGGDMMSLLIRM-----------------EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID---LDGHI 140 (381)
T ss_pred ecCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC---CCCCE
Confidence 999999998877432 5689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC------------------------------------------------CccccccCCccccchhc
Q 008127 257 KATDFGLSDFIKPGK------------------------------------------------KFQDIVGSAYYVAPEVL 288 (577)
Q Consensus 257 kl~DFGla~~~~~~~------------------------------------------------~~~~~~gt~~y~aPE~~ 288 (577)
||+|||++....... .....+||+.|+|||++
T Consensus 141 kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 220 (381)
T cd05626 141 KLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVL 220 (381)
T ss_pred EEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHH
Confidence 999999975331000 01235799999999988
Q ss_pred cc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccc--cCcCCCCCHH
Q 008127 289 KR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV--KDPRARLTAA 365 (577)
Q Consensus 289 ~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~--~dP~~Rpt~~ 365 (577)
.+ .++.++|||||||++|+|++|..||...+..+....+.........+.+..+++++.+||.+|+. .+|..||++.
T Consensus 221 ~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~ 300 (381)
T cd05626 221 LRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGAD 300 (381)
T ss_pred cCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence 65 46889999999999999999999998887777666666544333444445689999999999654 4555699999
Q ss_pred HHhcCcccccc
Q 008127 366 QALSHPWVREG 376 (577)
Q Consensus 366 ~il~hp~f~~~ 376 (577)
++++||||+..
T Consensus 301 ~~l~hp~f~~~ 311 (381)
T cd05626 301 DIKAHPFFSEV 311 (381)
T ss_pred HHhcCcccCCC
Confidence 99999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-47 Score=384.14 Aligned_cols=248 Identities=27% Similarity=0.398 Sum_probs=210.7
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCE-EEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-eEEEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDR-VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-YVYIA 175 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~-vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~~lv 175 (577)
..+.+.||.|+||+||+|.++ |.. ||||++......... ...|.+|+.+|.+|+ |||||+++|++.... .++||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~-HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLR-HPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred hhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCceEEE
Confidence 455666999999999999765 556 999999766543333 778999999999995 999999999999887 79999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC-ceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG-LVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~-iiHrDlKp~NILl~~~~~~~ 254 (577)
|||+++|+|.+++... ....++...+..++.||++|++|||+++ ||||||||+|||++ .+.
T Consensus 119 tEy~~~GsL~~~l~~~---------------~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~---~~~ 180 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKK---------------RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVD---LKG 180 (362)
T ss_pred EEeCCCCcHHHHHhhc---------------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEc---CCC
Confidence 9999999999987542 2478999999999999999999999999 99999999999998 465
Q ss_pred -CeeEEecCCCcccCCC-CCccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 255 -SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 255 -~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
++||+|||+++..... .......||+.|||||++.+. ++.++||||||+++|||+||+.||.+....++...+..
T Consensus 181 ~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~ 260 (362)
T KOG0192|consen 181 KTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVV 260 (362)
T ss_pred CEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 9999999999876654 334457899999999999854 79999999999999999999999999888666666665
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.......+ ..+++.+..||.+||..||.+||+..+++.
T Consensus 261 ~~~Rp~~p--~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 261 GGLRPPIP--KECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred cCCCCCCC--ccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 44332221 237899999999999999999999998865
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-47 Score=394.18 Aligned_cols=259 Identities=29% Similarity=0.485 Sum_probs=223.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+++.+|+|
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEE
Confidence 4799999999999999999999999999999999764433333445678899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 122 ~Ey~~gg~L~~~l~------------------~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~~ 180 (370)
T cd05596 122 MEYMPGGDLVNLMS------------------NYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGH 180 (370)
T ss_pred EcCCCCCcHHHHHH------------------hcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEc---CCCC
Confidence 99999999988663 24578899999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCC--CccccccCCccccchhccc-----CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+.
T Consensus 181 ~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~ 260 (370)
T cd05596 181 LKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 260 (370)
T ss_pred EEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHH
Confidence 9999999997654322 2235679999999998754 25789999999999999999999999988888888888
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
........+....+|.++.+||.+||..+|.+ |+|+.++++||||+..
T Consensus 261 ~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 261 DHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred cCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 76544444444568999999999999999988 9999999999999864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-47 Score=396.17 Aligned_cols=258 Identities=31% Similarity=0.504 Sum_probs=220.2
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++++.||+|+||.||+|++..+++.||||++.+...........+.+|+.+++.+ +||||+++++.+.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEEEE
Confidence 589999999999999999999999999999999765443344567789999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||++|+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~gg~L~~~l~~~-----------------~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~---~~g~~ 140 (382)
T cd05625 81 DYIPGGDMMSLLIRM-----------------GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID---RDGHI 140 (382)
T ss_pred eCCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCE
Confidence 999999998876432 5689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCC------------------------------------------------CCccccccCCccccchhc
Q 008127 257 KATDFGLSDFIKPG------------------------------------------------KKFQDIVGSAYYVAPEVL 288 (577)
Q Consensus 257 kl~DFGla~~~~~~------------------------------------------------~~~~~~~gt~~y~aPE~~ 288 (577)
||+|||++...... ......+||+.|+|||++
T Consensus 141 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 220 (382)
T cd05625 141 KLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVL 220 (382)
T ss_pred EEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHh
Confidence 99999997532100 001235799999999987
Q ss_pred cc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC---H
Q 008127 289 KR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---A 364 (577)
Q Consensus 289 ~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt---~ 364 (577)
.+ .++.++|||||||++|+|++|+.||.+.+..+....+.........+....+++++.++|.+|+ .+|.+|++ +
T Consensus 221 ~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~ 299 (382)
T cd05625 221 LRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGA 299 (382)
T ss_pred cCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCH
Confidence 64 5689999999999999999999999988887777777765544444455678999999999986 59999997 9
Q ss_pred HHHhcCcccccc
Q 008127 365 AQALSHPWVREG 376 (577)
Q Consensus 365 ~~il~hp~f~~~ 376 (577)
.++++||||+..
T Consensus 300 ~ei~~hp~f~~~ 311 (382)
T cd05625 300 DEIKAHPFFKTI 311 (382)
T ss_pred HHHhcCCCcCCc
Confidence 999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-47 Score=366.24 Aligned_cols=264 Identities=30% Similarity=0.474 Sum_probs=218.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCC-eeEEEEEEEcCC----
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-VVKFYNAFEDDN---- 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn-iv~~~~~~~~~~---- 170 (577)
..|..+++||+|+||+||+|+++.+|+.||+|++...... +-.-....+|+.+|+.|+ |+| ||.+++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLS-HANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhC-CCcceEEEEeeeeecccccc
Confidence 3578888899999999999999999999999999765432 112344689999999995 999 999999998876
Q ss_pred --eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 171 --YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+++|+||+. -+|..++.... .....++...++.++.||+.||+|||+++|+||||||.|||++
T Consensus 89 ~~~l~lvfe~~d-~DL~~ymd~~~-------------~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~ 154 (323)
T KOG0594|consen 89 IGKLYLVFEFLD-RDLKKYMDSLP-------------KKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS 154 (323)
T ss_pred cceEEEEEEeec-ccHHHHHHhcc-------------ccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC
Confidence 8999999994 57877764331 0003577789999999999999999999999999999999999
Q ss_pred cCCCCCCeeEEecCCCcccC-CCCCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
. .+.+||+|||+|+... +...+...++|.+|+|||++.+. |++..||||+|||++||+++++.|.+.++.+.+.
T Consensus 155 ~---~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~ 231 (323)
T KOG0594|consen 155 S---SGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLF 231 (323)
T ss_pred C---CCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence 4 8899999999999766 45557788999999999998764 6899999999999999999999999999888887
Q ss_pred HHHhCCCCCCCCCC--------------------------CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKPDFRRKPW--------------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~~~~~~~~--------------------------~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.|..--.......| +..++...+++.+||+.+|.+|+|+..+|.||||.....
T Consensus 232 ~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 232 RIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred HHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 77652221111122 223457899999999999999999999999999998754
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-49 Score=385.25 Aligned_cols=256 Identities=28% Similarity=0.499 Sum_probs=223.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|...+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+.+|.++ ++|||.++|+.|..+..+|++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~--~deIediqqei~~Ls~~-~~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA--EDEIEDIQQEISVLSQC-DSPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhc--chhhHHHHHHHHHHHhc-CcchHHhhhhheeecccHHHH
Confidence 357888999999999999999999999999999977643 34578899999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||.||++.+.+.. ...+.+..+..++.+++.||.|||.++.+|||||+.|||+. ..+.
T Consensus 90 Mey~~gGsv~~lL~~-----------------~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~ 149 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKS-----------------GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGD 149 (467)
T ss_pred HHHhcCcchhhhhcc-----------------CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCc
Confidence 999999999986642 34558899999999999999999999999999999999998 4689
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
|||+|||.+..+..... ..+++|||.|||||++.+ .|+.++||||||++.+||++|.+|+....+..++..|-+..++
T Consensus 150 vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP 229 (467)
T KOG0201|consen 150 VKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPP 229 (467)
T ss_pred EEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCC
Confidence 99999999987765433 378999999999999886 6799999999999999999999999888776555555444333
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
... ..+|+.+++||..||.+||+.||+|.++|+|+|++...
T Consensus 230 ~L~---~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 230 RLD---GDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred ccc---cccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 222 26789999999999999999999999999999999844
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-47 Score=384.43 Aligned_cols=248 Identities=26% Similarity=0.490 Sum_probs=215.9
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||+|+||.||+|++..+++.||+|++.+...........+.+|+.++.++ +||||+++++++...+.+|+|||||++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 79999999999999999999999998765433344567788999999999 59999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 80 L~~~l~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~---~~~~~kl~Dfg~ 139 (312)
T cd05585 80 LFHHLQR-----------------EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLD---YQGHIALCDFGL 139 (312)
T ss_pred HHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEEC---CCCcEEEEECcc
Confidence 9887743 35689999999999999999999999999999999999998 478899999999
Q ss_pred CcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCC
Q 008127 264 SDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341 (577)
Q Consensus 264 a~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 341 (577)
++.... .......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+.+..+......++ ..
T Consensus 140 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~ 215 (312)
T cd05585 140 CKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----DG 215 (312)
T ss_pred cccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC----Cc
Confidence 975432 2233456899999999988654 58899999999999999999999999888888888877655443 45
Q ss_pred CCHHHHHHHHHccccCcCCCC---CHHHHhcCcccccc
Q 008127 342 ISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREG 376 (577)
Q Consensus 342 ~s~~~~~li~~~l~~dP~~Rp---t~~~il~hp~f~~~ 376 (577)
+++++.+||.+||..||.+|| ++.++|.||||+..
T Consensus 216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 789999999999999999997 58999999999874
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-47 Score=395.47 Aligned_cols=258 Identities=27% Similarity=0.492 Sum_probs=217.2
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+++.||+|+||.||+|.+..+|+.||||++.+...........+.+|+++++.+ +||||+++++++.+.+.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEEEE
Confidence 699999999999999999999999999999998765433344567788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||+||+|.+++.. ...+++..++.++.|++.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~gg~L~~~l~~-----------------~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~---~~~~~ 140 (377)
T cd05629 81 EFLPGGDLMTMLIK-----------------YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID---RGGHI 140 (377)
T ss_pred eCCCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCE
Confidence 99999999887643 36789999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC------------------------------------------------CccccccCCccccchhc
Q 008127 257 KATDFGLSDFIKPGK------------------------------------------------KFQDIVGSAYYVAPEVL 288 (577)
Q Consensus 257 kl~DFGla~~~~~~~------------------------------------------------~~~~~~gt~~y~aPE~~ 288 (577)
||+|||+++...... .....+||+.|+|||++
T Consensus 141 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 220 (377)
T cd05629 141 KLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIF 220 (377)
T ss_pred EEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHH
Confidence 999999986321100 00124799999999988
Q ss_pred cc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCC---CCH
Q 008127 289 KR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR---LTA 364 (577)
Q Consensus 289 ~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R---pt~ 364 (577)
.+ .++.++|||||||++|+|++|..||.+....+.+..+.........+....++.++.+||.+||. +|.+| +|+
T Consensus 221 ~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~ 299 (377)
T cd05629 221 LQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGA 299 (377)
T ss_pred ccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCH
Confidence 65 46899999999999999999999999888877777777644333333334578999999999998 67765 599
Q ss_pred HHHhcCcccccc
Q 008127 365 AQALSHPWVREG 376 (577)
Q Consensus 365 ~~il~hp~f~~~ 376 (577)
.+++.||||+..
T Consensus 300 ~~~l~hp~~~~~ 311 (377)
T cd05629 300 HEIKSHPFFRGV 311 (377)
T ss_pred HHHhcCCCcCCC
Confidence 999999999863
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-47 Score=391.69 Aligned_cols=259 Identities=29% Similarity=0.483 Sum_probs=220.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence 4799999999999999999999999999999998764433333456678899999988 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 122 ~Ey~~gg~L~~~l~------------------~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~---~~~~ 180 (370)
T cd05621 122 MEYMPGGDLVNLMS------------------NYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD---KHGH 180 (370)
T ss_pred EcCCCCCcHHHHHH------------------hcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCC
Confidence 99999999988663 23578999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhcccC-----CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~-----~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||+|........ ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+.
T Consensus 181 ~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~ 260 (370)
T cd05621 181 LKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 260 (370)
T ss_pred EEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999987643322 2456899999999998642 5789999999999999999999999988888888887
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
.....+..+....+++.+.+++..||..+|.+ |+|+.++++||||+..
T Consensus 261 ~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 261 DHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred hCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 75544443333467899999999999865544 8999999999999874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-47 Score=395.21 Aligned_cols=258 Identities=28% Similarity=0.467 Sum_probs=219.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++++.||+|+||.||+|++..+++.||||++.+...........+.+|+.+++.+ +||||+++++.|.+++.+|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEEEE
Confidence 699999999999999999999999999999998765432333456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~~g~L~~~i~~-----------------~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~i 140 (376)
T cd05598 81 DYIPGGDMMSLLIR-----------------LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHI 140 (376)
T ss_pred eCCCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC---CCCCE
Confidence 99999999987743 35688999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC--------------------------------------------CCccccccCCccccchhcccC-
Q 008127 257 KATDFGLSDFIKPG--------------------------------------------KKFQDIVGSAYYVAPEVLKRK- 291 (577)
Q Consensus 257 kl~DFGla~~~~~~--------------------------------------------~~~~~~~gt~~y~aPE~~~~~- 291 (577)
||+|||+|..+... ......+||+.|+|||++.+.
T Consensus 141 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 220 (376)
T cd05598 141 KLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTG 220 (376)
T ss_pred EEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCC
Confidence 99999997532100 001235799999999988754
Q ss_pred CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC---CHHHHh
Q 008127 292 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQAL 368 (577)
Q Consensus 292 ~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp---t~~~il 368 (577)
++.++|||||||++|+|++|+.||.+....+....+.........+.+..+++++.++|.+|+ .+|.+|+ |+.+++
T Consensus 221 ~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell 299 (376)
T cd05598 221 YTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIK 299 (376)
T ss_pred CCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHh
Confidence 588999999999999999999999988887777777665444444445578999999999987 5999999 999999
Q ss_pred cCcccccc
Q 008127 369 SHPWVREG 376 (577)
Q Consensus 369 ~hp~f~~~ 376 (577)
+||||+..
T Consensus 300 ~h~~~~~~ 307 (376)
T cd05598 300 AHPFFKGI 307 (376)
T ss_pred CCCCcCCC
Confidence 99999863
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-47 Score=384.52 Aligned_cols=250 Identities=29% Similarity=0.532 Sum_probs=216.0
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999765433344567788999999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 80 g~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~Df 139 (328)
T cd05593 80 GELFFHLSR-----------------ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD---KDGHIKITDF 139 (328)
T ss_pred CCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC---CCCcEEEecC
Confidence 999876643 36789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+....+......++
T Consensus 140 G~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p---- 215 (328)
T cd05593 140 GLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP---- 215 (328)
T ss_pred cCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC----
Confidence 99876432 223345689999999998865 468899999999999999999999998888777777766554433
Q ss_pred CCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..+++++.+||.+||..||.+|| ++.++++||||...
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 45789999999999999999997 89999999999763
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-47 Score=384.07 Aligned_cols=251 Identities=30% Similarity=0.551 Sum_probs=216.8
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.++.+++.||||++.+...........+..|+.++..+.+||||+++++++...+.+|+|||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999987654333345567788999998876799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 g~L~~~i~~-----------------~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~---~~~~~kL~Df 140 (320)
T cd05590 81 GDLMFHIQK-----------------SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADF 140 (320)
T ss_pred chHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeeC
Confidence 999876643 36789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccC-CCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++.... ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+++..+......++
T Consensus 141 G~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~---- 216 (320)
T cd05590 141 GMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP---- 216 (320)
T ss_pred CCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC----
Confidence 9987542 22333456899999999988754 58899999999999999999999999888888888877654433
Q ss_pred CCCCHHHHHHHHHccccCcCCCCCH------HHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt~------~~il~hp~f~~~ 376 (577)
..++.++.+||.+||+.||.+||++ +++++||||+..
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 217 TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 3478999999999999999999998 999999999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-47 Score=390.41 Aligned_cols=258 Identities=33% Similarity=0.610 Sum_probs=223.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||+|+||.||+|++..+|+.||||++.+...........+.+|+.++..+ +||||+++++++.+++.+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEEEE
Confidence 699999999999999999999999999999999765433334566788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 e~~~~~~L~~~l~~~-----------------~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~---~~~~~ 140 (350)
T cd05573 81 EYMPGGDLMNLLIRK-----------------DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID---ADGHI 140 (350)
T ss_pred cCCCCCCHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCE
Confidence 999999998876432 6789999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC------------------------------CccccccCCccccchhcccC-CCCCCchhhHHHHH
Q 008127 257 KATDFGLSDFIKPGK------------------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVIT 305 (577)
Q Consensus 257 kl~DFGla~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il 305 (577)
||+|||++....... ......||+.|+|||++.+. ++.++|||||||++
T Consensus 141 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 220 (350)
T cd05573 141 KLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVIL 220 (350)
T ss_pred EeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhh
Confidence 999999998654332 22345799999999988754 68899999999999
Q ss_pred HHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC-HHHHhcCcccccc
Q 008127 306 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-AAQALSHPWVREG 376 (577)
Q Consensus 306 ~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-~~~il~hp~f~~~ 376 (577)
|+|++|+.||.+....+....+.........+....+++++.+||.+||. ||.+||+ +.++++||||+..
T Consensus 221 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 221 YEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred hhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 99999999999888877777777733333333344579999999999997 9999999 9999999999864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-46 Score=382.34 Aligned_cols=256 Identities=26% Similarity=0.460 Sum_probs=220.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++++.||+|+||.||+|.+..+++.||||++.+.........+.+..|+.++..+.+|++|+.+++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 48899999999999999999999999999999876543333456678889999999865667899999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~~g~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~ 140 (324)
T cd05587 81 EYVNGGDLMYHIQQ-----------------VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---AEGHI 140 (324)
T ss_pred cCCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc---CCCCE
Confidence 99999999876643 35689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccC-CCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||++.... ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+.+..+......+
T Consensus 141 kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~ 220 (324)
T cd05587 141 KIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY 220 (324)
T ss_pred EEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 999999987532 22333456899999999988764 5889999999999999999999999988888888887765544
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCH-----HHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~-----~~il~hp~f~~~ 376 (577)
+ ..+++++.++|.+||..||.+|+++ .++++||||+..
T Consensus 221 ~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 221 P----KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred C----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 3 3578999999999999999999976 899999999864
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-47 Score=383.46 Aligned_cols=244 Identities=27% Similarity=0.431 Sum_probs=210.7
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.+++++.||+|.||+||+|.+..+ ..||+|.+....+ ..+.|.+|+++|++|+ |++||+++++|..++.+||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSM----SPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCC-CcccceEEecccc----ChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCceEEEE
Confidence 567889999999999999986533 3899999876543 4467889999999995 999999999999988999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||+.|+|.++|... ....+...+.+.++.|||+|++||+++++|||||-..||||+ ++..|
T Consensus 281 E~m~~GsLl~yLr~~---------------~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~---~~~~v 342 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTR---------------EGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD---EDLVV 342 (468)
T ss_pred EecccCcHHHHhhhc---------------CCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec---cCceE
Confidence 999999999988642 357789999999999999999999999999999999999998 58899
Q ss_pred eEEecCCCcccCCCCCcccccc---CCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVG---SAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~g---t~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
||+|||||+.+.+. .+....| ...|.|||++. +.++.+||||||||+||||+| |+.||.+.+..+++..+-++.
T Consensus 343 KIsDFGLAr~~~d~-~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~Gy 421 (468)
T KOG0197|consen 343 KISDFGLARLIGDD-EYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGY 421 (468)
T ss_pred EEcccccccccCCC-ceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccC
Confidence 99999999965433 2322222 34699999886 678999999999999999999 999999999999999988764
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
. -+.++.+|+++.+++..||+.+|++|||.+.+.
T Consensus 422 R---lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 422 R---LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred c---CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 3 333467999999999999999999999998654
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=376.24 Aligned_cols=255 Identities=25% Similarity=0.417 Sum_probs=210.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|++..++..||+|.+..... ......+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEE
Confidence 369999999999999999999999999999999865432 12335677899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++ +|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 82 ~e~~~~-~l~~~l~~~----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~ 141 (288)
T cd07871 82 FEYLDS-DLKQYLDNC----------------GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN---EKGE 141 (288)
T ss_pred EeCCCc-CHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCC
Confidence 999974 887766422 24578999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+.+..+.....
T Consensus 142 ~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 221 (288)
T cd07871 142 LKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLG 221 (288)
T ss_pred EEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 999999999765322 22345678999999998764 458899999999999999999999988777666555433211
Q ss_pred CCCC--------------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 DFRR--------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 ~~~~--------------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.... ...+.+++++.+||.+||+.||.+|||++++|+||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 222 TPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 1000 0123467889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=382.54 Aligned_cols=250 Identities=31% Similarity=0.541 Sum_probs=216.1
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+|..||+|++.............+.+|+.+++.+ +||||++++++|...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 3699999999999999999999999998765433334556778899999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 80 ~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Df 139 (323)
T cd05595 80 GELFFHLSR-----------------ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDF 139 (323)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc---CCCCEEeccc
Confidence 999776643 35789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+......++
T Consensus 140 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p---- 215 (323)
T cd05595 140 GLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---- 215 (323)
T ss_pred HHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----
Confidence 99875322 233345689999999998864 468899999999999999999999998888888877776655443
Q ss_pred CCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..+++++.+||.+||..||.+|| ++.++++||||...
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 35789999999999999999998 99999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-47 Score=385.03 Aligned_cols=259 Identities=29% Similarity=0.503 Sum_probs=222.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||+|+||.||+|.++.+|+.||||++.+...........+.+|+.+++.+ +||||+++++++.+.+.+|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEEE
Confidence 699999999999999999999999999999999765443334566788999999988 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 e~~~~~~L~~~l~~~----------------~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~---~~~~~ 141 (330)
T cd05601 81 EYQPGGDLLSLLNRY----------------EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID---RTGHI 141 (330)
T ss_pred CCCCCCCHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC---CCCCE
Confidence 999999998877432 25689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCCCc--cccccCCccccchhcc-------cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 257 KATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLK-------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~-------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
||+|||++......... ....||+.|+|||++. ..++.++|||||||++|+|++|..||...+....+..+
T Consensus 142 kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i 221 (330)
T cd05601 142 KLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNI 221 (330)
T ss_pred EeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHH
Confidence 99999999876543322 2347999999999875 23578999999999999999999999988888888887
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
+........+..+.+++.+.+||.+||. +|.+|||+.++++||||+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 222 MNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred HcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 7654333333345688999999999998 99999999999999999864
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=388.38 Aligned_cols=258 Identities=28% Similarity=0.500 Sum_probs=219.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++.+.||+|+||.||+|.++.+++.||||++.............+.+|+.++..+ +||||+++++.+.+.+.+|+||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEE
Confidence 689999999999999999999999999999999765433334567788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||+||+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~gg~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~---~~~~v 140 (360)
T cd05627 81 EFLPGGDMMTLLMK-----------------KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLD---AKGHV 140 (360)
T ss_pred eCCCCccHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCCCE
Confidence 99999999887743 36789999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC------------------------------------CccccccCCccccchhccc-CCCCCCchh
Q 008127 257 KATDFGLSDFIKPGK------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVW 299 (577)
Q Consensus 257 kl~DFGla~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Diw 299 (577)
||+|||++....... .....+||+.|+|||++.+ .++.++|||
T Consensus 141 kL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~Diw 220 (360)
T cd05627 141 KLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWW 220 (360)
T ss_pred EEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceec
Confidence 999999987542110 0123579999999998865 468899999
Q ss_pred hHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC---CHHHHhcCcccccc
Q 008127 300 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREG 376 (577)
Q Consensus 300 SlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp---t~~~il~hp~f~~~ 376 (577)
||||++|+|++|+.||.+.+....+..+.........+....+++++.+||.+|+. ||.+|+ ++.++++||||+..
T Consensus 221 SlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 221 SLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred cccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 99999999999999999988888888887644333333333578999999999874 999998 48999999999874
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-46 Score=380.15 Aligned_cols=256 Identities=26% Similarity=0.446 Sum_probs=221.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||+|+||.||+|.+..+++.||||++.+...........+..|..++..+.+||+|+++++++...+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 48899999999999999999999999999999876543333345567788888888877999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 E~~~~g~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~ 140 (323)
T cd05616 81 EYVNGGDLMYQIQQ-----------------VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---SEGHI 140 (323)
T ss_pred cCCCCCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC---CCCcE
Confidence 99999999876643 35689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||++..... .......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+......+
T Consensus 141 kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 220 (323)
T cd05616 141 KIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 220 (323)
T ss_pred EEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 9999999975432 2233456899999999988754 6899999999999999999999999988888888888765544
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
+ ..+++++.+|+.+||+.||.+|++ ..++++||||+..
T Consensus 221 p----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 221 P----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred C----CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 3 357899999999999999999998 4899999999864
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-46 Score=380.56 Aligned_cols=251 Identities=27% Similarity=0.493 Sum_probs=216.9
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|++..+++.||||++.+...........+..|+.++..+.+||||+++++++...+.+|+|||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999999999999999987654333345566788999998776799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 ~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~---~~~~~kL~Df 140 (321)
T cd05591 81 GDLMFQIQR-----------------SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD---AEGHCKLADF 140 (321)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEeec
Confidence 999876643 36789999999999999999999999999999999999998 4789999999
Q ss_pred CCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+......++
T Consensus 141 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p---- 216 (321)
T cd05591 141 GMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP---- 216 (321)
T ss_pred ccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 99875432 223345679999999998875 468899999999999999999999999998888888887654433
Q ss_pred CCCCHHHHHHHHHccccCcCCCC-------CHHHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARL-------TAAQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rp-------t~~~il~hp~f~~~ 376 (577)
..++.++.+||.+||..||.+|| ++.++++||||...
T Consensus 217 ~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 217 VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 34789999999999999999999 99999999999753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-46 Score=386.04 Aligned_cols=259 Identities=28% Similarity=0.475 Sum_probs=220.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEE
Confidence 5799999999999999999999999999999998764433333455678899999988 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 122 ~Ey~~gg~L~~~~~~------------------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~---~~~~ 180 (371)
T cd05622 122 MEYMPGGDLVNLMSN------------------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGH 180 (371)
T ss_pred EcCCCCCcHHHHHHh------------------cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC---CCCC
Confidence 999999999886632 3578899999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCC--CccccccCCccccchhcccC-----CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~-----~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+....+..++
T Consensus 181 ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~ 260 (371)
T cd05622 181 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 260 (371)
T ss_pred EEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999999998664322 22356799999999998642 5789999999999999999999999988888888888
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
........+..+.++..+.+||..||..+|.+ |+++.++++||||+..
T Consensus 261 ~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 261 NHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred cCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 76544444444578999999999999844433 7899999999999874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-46 Score=380.08 Aligned_cols=250 Identities=26% Similarity=0.470 Sum_probs=209.8
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.++..+.+||||++++++|...+.+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999999999999999997654433445667889999999997799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 g~L~~~~~~-----------------~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~---~~~~~kL~Df 140 (329)
T cd05588 81 GDLMFHMQR-----------------QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDY 140 (329)
T ss_pred CCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEECcC
Confidence 999876642 36799999999999999999999999999999999999998 4788999999
Q ss_pred CCCccc-CCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCC---------hhHHHHHHHhC
Q 008127 262 GLSDFI-KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---------EDGIFKEVLRN 330 (577)
Q Consensus 262 Gla~~~-~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~---------~~~~~~~i~~~ 330 (577)
|+++.. .........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.... .......+...
T Consensus 141 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 220 (329)
T cd05588 141 GMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK 220 (329)
T ss_pred ccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC
Confidence 998753 233344567899999999988754 5889999999999999999999995311 12233444444
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC------HHHHhcCccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVRE 375 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt------~~~il~hp~f~~ 375 (577)
...++ ..++..+.++|.+||..||.+||| +.++++||||+.
T Consensus 221 ~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 221 QIRIP----RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred CCCCC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 33322 357899999999999999999997 789999999975
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-46 Score=379.00 Aligned_cols=254 Identities=27% Similarity=0.483 Sum_probs=216.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEcCCeEEEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~lv 175 (577)
|++.+.||+|+||.||+|.+..+|+.||||++.+.........+.+.+|+.++..+. +||||+++++++...+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 688999999999999999999999999999997654333334566778877764332 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|...+. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 81 ~E~~~~~~L~~~~~------------------~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~---~~~~ 139 (324)
T cd05589 81 MEYAAGGDLMMHIH------------------TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD---TEGF 139 (324)
T ss_pred EcCCCCCcHHHHhh------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCc
Confidence 99999999976542 25689999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+......
T Consensus 140 ~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~ 219 (324)
T cd05589 140 VKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR 219 (324)
T ss_pred EEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence 99999999875432 233345789999999998865 4588999999999999999999999998888888888776554
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
++ ..+++.+.++|.+||..||.+|| ++.++++||||+..
T Consensus 220 ~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 220 YP----RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred CC----CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 33 35789999999999999999999 79999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-46 Score=370.95 Aligned_cols=261 Identities=28% Similarity=0.451 Sum_probs=217.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++.+.||+|+||.||++.+..+++.||||++.............+.+|+.+++.+ +||||+++++++..++.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEEE
Confidence 488999999999999999999999999999998765432233345678899999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+... ....+++..+..++.|++.||.|||+.||+||||||+||+++ +++.+
T Consensus 80 e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~ 141 (285)
T cd05605 80 TLMNGGDLKFHIYNM---------------GNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD---DYGHI 141 (285)
T ss_pred eccCCCcHHHHHHhc---------------CcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC---CCCCE
Confidence 999999998766432 235689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
+|+|||++............+||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.........+........
T Consensus 142 ~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 221 (285)
T cd05605 142 RISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ 221 (285)
T ss_pred EEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc
Confidence 9999999987654444455689999999998864 458889999999999999999999987665444333322211112
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
...++.++..+.+||.+||..||.+|| ++.++++||||...
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 222345789999999999999999999 99999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-46 Score=377.09 Aligned_cols=251 Identities=31% Similarity=0.533 Sum_probs=213.2
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+++.||||++.+.........+.+..|..++..+.+||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999987654322334556677888887666799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 g~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~---~~~~~kL~Df 140 (316)
T cd05592 81 GDLMFHIQS-----------------SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD---KDGHIKIADF 140 (316)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC---CCCCEEEccC
Confidence 999876643 35789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+....+.++
T Consensus 141 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~---- 216 (316)
T cd05592 141 GMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP---- 216 (316)
T ss_pred cCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 999764322 233456899999999988754 58899999999999999999999999888888877766544333
Q ss_pred CCCCHHHHHHHHHccccCcCCCCCH-HHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLTA-AQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt~-~~il~hp~f~~~ 376 (577)
..++.++.+||.+||..||.+||++ .++++||||+..
T Consensus 217 ~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 217 RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 3478999999999999999999986 588899999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-48 Score=411.37 Aligned_cols=259 Identities=29% Similarity=0.486 Sum_probs=231.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.|+++||+|+||.|.+++++.|++.||+|++.+-.+.......-|+.|..+|-.- +.++|+.+.-.|.++.++|+|
T Consensus 75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccceEEE
Confidence 4799999999999999999999999999999999887666556677788999998755 799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|...+. +...+++..++.|+..|+.||.-||+.|+|||||||+||||+ ..|+
T Consensus 154 MdY~pGGDlltLlS-----------------k~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld---~~GH 213 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLS-----------------KFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLD---KSGH 213 (1317)
T ss_pred EecccCchHHHHHh-----------------hcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEec---ccCc
Confidence 99999999987653 345899999999999999999999999999999999999999 5899
Q ss_pred eeEEecCCCcccCC-CCC-ccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 256 LKATDFGLSDFIKP-GKK-FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 256 vkl~DFGla~~~~~-~~~-~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
|||+|||.+-.+.. +.. ....+|||.|+|||++. +.|++.+|+||+||++|||++|.+||+..+.-+.|.+|
T Consensus 214 ikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KI 293 (1317)
T KOG0612|consen 214 IKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKI 293 (1317)
T ss_pred EeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHH
Confidence 99999999877653 332 34678999999999984 45799999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC---HHHHhcCcccccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt---~~~il~hp~f~~~ 376 (577)
+.....+..+....+|+++++||+++++ +|+.|.. ++++..||||...
T Consensus 294 m~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 294 MNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred hchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence 9886555555556799999999999998 6999998 9999999999975
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-47 Score=355.11 Aligned_cols=267 Identities=36% Similarity=0.627 Sum_probs=234.2
Q ss_pred ccccceee-eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 93 DFDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 93 ~~~~~y~~-~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.|.+-|++ .+.||+|+||.|--+....+|..||||+|.+.. ......+.+|++++.+.++|+||++++++|+++..
T Consensus 74 ~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~ 150 (463)
T KOG0607|consen 74 KFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR 150 (463)
T ss_pred hHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce
Confidence 35556776 468999999999999999999999999998863 35678899999999999999999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||-|.||.|+.+|.+. ..|++.++..+.++|+.||.+||.+||.||||||+|||....+
T Consensus 151 FYLVfEKm~GGplLshI~~~-----------------~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn 213 (463)
T KOG0607|consen 151 FYLVFEKMRGGPLLSHIQKR-----------------KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPN 213 (463)
T ss_pred EEEEEecccCchHHHHHHHh-----------------hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCC
Confidence 99999999999999988654 7799999999999999999999999999999999999998766
Q ss_pred CCCCeeEEecCCCcccCCC--------CCccccccCCccccchhcc---c---CCCCCCchhhHHHHHHHHHhCCCCCCC
Q 008127 252 EDSSLKATDFGLSDFIKPG--------KKFQDIVGSAYYVAPEVLK---R---KSGPESDVWSIGVITYILLCGRRPFWD 317 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~--------~~~~~~~gt~~y~aPE~~~---~---~~~~~~DiwSlG~il~el~tg~~Pf~~ 317 (577)
.-.-||||||.+..-+... ....+.+|+..|||||+.. + .|..++|.||||||||.|+.|.+||.+
T Consensus 214 ~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG 293 (463)
T KOG0607|consen 214 KVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG 293 (463)
T ss_pred CcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence 6667999999987654322 2344678999999999753 2 468899999999999999999999954
Q ss_pred CC---------------hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 318 KT---------------EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 318 ~~---------------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
.- ...++..|..+..+|+...|..+|.+++++|..+|..||.+|.++.++++|||++.....
T Consensus 294 ~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 294 HCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred ccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 21 245788899999999999999999999999999999999999999999999999876544
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-46 Score=381.01 Aligned_cols=250 Identities=30% Similarity=0.534 Sum_probs=215.0
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999765433334556778899999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
|+|.+++.. ...+++..++.++.||+.||.|||+ .||+||||||+|||++ .++.+||+|
T Consensus 80 ~~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~---~~~~~kL~D 139 (325)
T cd05594 80 GELFFHLSR-----------------ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITD 139 (325)
T ss_pred CcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEEC---CCCCEEEec
Confidence 999876642 3578999999999999999999997 7999999999999998 478899999
Q ss_pred cCCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 261 FGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 261 FGla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
||++.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+......++
T Consensus 140 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p--- 216 (325)
T cd05594 140 FGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP--- 216 (325)
T ss_pred CCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC---
Confidence 99987532 2233345679999999998865 468899999999999999999999998888777777766554443
Q ss_pred CCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..+++++.+||.+||..||++|+ ++.++++||||+..
T Consensus 217 -~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 217 -RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred -CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 35789999999999999999997 99999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-46 Score=377.17 Aligned_cols=251 Identities=28% Similarity=0.501 Sum_probs=213.2
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.++.+|+.||+|++.+...........+..|..++..+.+||||+++++++...+.+|+|||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999999999999987643222234556778888887766799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+||
T Consensus 81 g~L~~~i~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~---~~~~~kl~Df 140 (316)
T cd05620 81 GDLMFHIQD-----------------KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD---RDGHIKIADF 140 (316)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEeCcc
Confidence 999876643 36789999999999999999999999999999999999998 4778999999
Q ss_pred CCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+....+.++
T Consensus 141 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~---- 216 (316)
T cd05620 141 GMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP---- 216 (316)
T ss_pred CCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----
Confidence 99875322 223345689999999999875 468899999999999999999999998888888777766544433
Q ss_pred CCCCHHHHHHHHHccccCcCCCCCH-HHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLTA-AQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt~-~~il~hp~f~~~ 376 (577)
..++.++.+||.+||+.||.+||++ .++++||||+..
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 217 RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 2478999999999999999999998 588899999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-46 Score=374.22 Aligned_cols=259 Identities=26% Similarity=0.414 Sum_probs=207.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.++.+++.||||++..... ......+.+|+.+++.+ +||||+++++++..+..+|+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEEEE
Confidence 479999999999999999999999999999999875432 12234567899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 82 ~e~~~-~~l~~~~~~~----------------~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~ 141 (303)
T cd07869 82 FEYVH-TDLCQYMDKH----------------PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS---DTGE 141 (303)
T ss_pred EECCC-cCHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCC
Confidence 99995 6777765322 35688999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCC-CCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhC-
Q 008127 256 LKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN- 330 (577)
Q Consensus 256 vkl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~~~- 330 (577)
+||+|||++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... .+.+..+...
T Consensus 142 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 221 (303)
T cd07869 142 LKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVL 221 (303)
T ss_pred EEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence 99999999875432 223345678999999998764 357889999999999999999999977533 2333322211
Q ss_pred -CC------------CCCCCC------------C--CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 331 -KP------------DFRRKP------------W--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 331 -~~------------~~~~~~------------~--~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+ .+.... | ...++.+.+||.+||+.||++|||+.++|+||||+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 222 GTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred CCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 00 000000 0 12456789999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=375.51 Aligned_cols=256 Identities=25% Similarity=0.442 Sum_probs=220.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.++.+|+.||||++.+.........+.+..|+.++..+.+||+|+++++++...+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 37888999999999999999999999999999876543333345667889999988876788999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 Ey~~~g~L~~~i~~-----------------~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~---~~~~i 140 (323)
T cd05615 81 EYVNGGDLMYHIQQ-----------------VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD---SEGHI 140 (323)
T ss_pred cCCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCE
Confidence 99999999886643 36789999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.........+......+
T Consensus 141 kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~ 220 (323)
T cd05615 141 KIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY 220 (323)
T ss_pred EEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 99999998754322 223456799999999988754 5889999999999999999999999988888888888765544
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
+ ..++.++.+++.+||..+|.+|++ ..++++||||+..
T Consensus 221 p----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 221 P----KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred C----ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 3 457899999999999999999997 5799999999864
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-46 Score=376.46 Aligned_cols=251 Identities=29% Similarity=0.517 Sum_probs=216.2
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+++.||||++.+...........+.+|+.++..+.+||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999997654333345566788999998886799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 ~~L~~~~~~-----------------~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kl~Df 140 (318)
T cd05570 81 GDLMFHIQR-----------------SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD---SEGHIKIADF 140 (318)
T ss_pred CCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC---CCCcEEeccc
Confidence 999876643 35789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+......++
T Consensus 141 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~---- 216 (318)
T cd05570 141 GMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP---- 216 (318)
T ss_pred CCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 9987532 2223345679999999998875 458899999999999999999999998888877777776654433
Q ss_pred CCCCHHHHHHHHHccccCcCCCCCH-----HHHhcCcccccc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG 376 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt~-----~~il~hp~f~~~ 376 (577)
..++..+.+||.+||..||.+|||+ .++++||||+..
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 217 RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 3578999999999999999999999 999999999874
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-46 Score=392.17 Aligned_cols=260 Identities=23% Similarity=0.412 Sum_probs=210.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC-----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD----- 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----- 169 (577)
..+|++++.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.+ +||||++++++|...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNL-NHINIIFLKDYYYTECFKKN 136 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhc-CCCCCcceeeeEeecccccC
Confidence 457999999999999999999999999999999885432 2245799999999 599999999877432
Q ss_pred ---CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 170 ---NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 170 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
..+++||||+++ +|.+.+... ......+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 137 ~~~~~l~lvmE~~~~-~l~~~~~~~-------------~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NIL 202 (440)
T PTZ00036 137 EKNIFLNVVMEFIPQ-TVHKYMKHY-------------ARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLL 202 (440)
T ss_pred CCceEEEEEEecCCc-cHHHHHHHH-------------hhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEE
Confidence 257899999975 676655321 123467899999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
++. .++.+||+|||+|+...........+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+
T Consensus 203 l~~--~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~ 280 (440)
T PTZ00036 203 IDP--NTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQL 280 (440)
T ss_pred EcC--CCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 984 345799999999987765555556789999999998764 4688999999999999999999999988776665
Q ss_pred HHHHhCCC------------C-----CCCC--------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 325 KEVLRNKP------------D-----FRRK--------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 325 ~~i~~~~~------------~-----~~~~--------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
..++.... . ++.. .....++++.+||.+||.+||.+|||+.++|+||||+....
T Consensus 281 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 281 VRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred HHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 55543110 0 1100 01236789999999999999999999999999999987543
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-46 Score=377.17 Aligned_cols=258 Identities=28% Similarity=0.474 Sum_probs=231.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe-EEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY-VYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~-~~l 174 (577)
++|.+++.+|+|+||.+++++++.++..||+|.|.......+ ......+|+.+++++. |||||.+++.|..++. ++|
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-~r~~A~~E~~lis~~~-hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-ERRSAIQEMDLLSKLL-HPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-hhHHHHHHHHHHHhcc-CCCeeeeccchhcCCceEEE
Confidence 479999999999999999999999999999999987765444 3457889999999995 9999999999998887 999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||+||+||+|.+.+... +...|+++.+..|+.||+.|+.|||+++|+|||||+.||+++ .+.
T Consensus 82 vm~Y~eGg~l~~~i~~~---------------k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt---k~~ 143 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQ---------------KGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT---KDK 143 (426)
T ss_pred EEeecCCCCHHHHHHHH---------------hhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc---ccC
Confidence 99999999999988765 357799999999999999999999999999999999999999 477
Q ss_pred CeeEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.|||+|||+|+.+.+.. ...+.+|||.||+||++.+. |+.|+|||||||++|||++-+++|.+.+...+..+|.....
T Consensus 144 ~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~ 223 (426)
T KOG0589|consen 144 KVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLY 223 (426)
T ss_pred ceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccC
Confidence 88999999999988766 55678999999999999874 69999999999999999999999999999999999988763
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.. .....+.+++.+|+.||..+|..||++.++|.+|.+..+
T Consensus 224 ~P---lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 224 SP---LPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred CC---CCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 22 224678999999999999999999999999999988754
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-46 Score=379.09 Aligned_cols=256 Identities=27% Similarity=0.509 Sum_probs=212.7
Q ss_pred ceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+|++++.||+|+||.||+|++. .+++.||+|++.+.... .....+.+.+|+.++..+.+||||+++++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4899999999999999999864 47899999998654321 1234566889999999997799999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||||++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 81 ~lv~e~~~~g~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~---~ 140 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ-----------------RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD---S 140 (332)
T ss_pred EEEEeCCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC---C
Confidence 999999999999887743 36689999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCC--CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCC----hhHHH
Q 008127 253 DSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKT----EDGIF 324 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~----~~~~~ 324 (577)
++.+||+|||+++...... .....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.... .....
T Consensus 141 ~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~ 220 (332)
T cd05614 141 EGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVS 220 (332)
T ss_pred CCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHH
Confidence 7889999999997653322 22356899999999998753 4788999999999999999999996432 23344
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..+....+.+ .+.+++.+.+||.+||..||++|| +++++++||||+..
T Consensus 221 ~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 221 RRILKCDPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred HHHhcCCCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 4444433332 245789999999999999999999 88999999999864
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=376.65 Aligned_cols=251 Identities=25% Similarity=0.463 Sum_probs=209.3
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.++.++.+||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654433445667889999998887799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 ~~L~~~~~~-----------------~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~---~~~~~kL~Df 140 (329)
T cd05618 81 GDLMFHMQR-----------------QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDY 140 (329)
T ss_pred CCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCCEEEeeC
Confidence 999776532 36789999999999999999999999999999999999998 4789999999
Q ss_pred CCCcccC-CCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCC---------ChhHHHHHHHhC
Q 008127 262 GLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK---------TEDGIFKEVLRN 330 (577)
Q Consensus 262 Gla~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~---------~~~~~~~~i~~~ 330 (577)
|+++... ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||... ........+...
T Consensus 141 G~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~ 220 (329)
T cd05618 141 GMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 220 (329)
T ss_pred CccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC
Confidence 9997532 23334456899999999988754 588999999999999999999999521 112233444444
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC------HHHHhcCcccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt------~~~il~hp~f~~~ 376 (577)
...++ ..++..+.+||.+||..||.+||| +.++++||||+..
T Consensus 221 ~~~~p----~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 221 QIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CCCCC----CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 33332 457899999999999999999998 5899999999764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-45 Score=374.74 Aligned_cols=252 Identities=29% Similarity=0.501 Sum_probs=213.4
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|++..+++.||||++................|..++..+.+||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999987653222234456677888887765799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 g~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Df 140 (316)
T cd05619 81 GDLMFHIQS-----------------CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD---TDGHIKIADF 140 (316)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEccC
Confidence 999887643 25688999999999999999999999999999999999998 4778999999
Q ss_pred CCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 262 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 262 Gla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+....+.++
T Consensus 141 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~---- 216 (316)
T cd05619 141 GMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP---- 216 (316)
T ss_pred CcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----
Confidence 99875322 223345689999999998875 458899999999999999999999998888877777765544332
Q ss_pred CCCCHHHHHHHHHccccCcCCCCCHH-HHhcCccccccC
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLTAA-QALSHPWVREGG 377 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt~~-~il~hp~f~~~~ 377 (577)
..++.++.+||.+||+.||.+||++. ++++||||+...
T Consensus 217 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 217 RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 34788999999999999999999996 899999998753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-45 Score=369.95 Aligned_cols=255 Identities=27% Similarity=0.451 Sum_probs=208.2
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|+++.+++.||||++..... .......+.+|+.+++.+ +||||+++++++..++.+|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEEEE
Confidence 69999999999999999999999999999999875432 223456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++++.+.. +.. ....+++..++.++.||+.||.|||+.||+||||||+||+++ .++.+
T Consensus 80 e~~~~~~l~~-~~~----------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~---~~~~~ 139 (287)
T cd07848 80 EYVEKNMLEL-LEE----------------MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS---HNDVL 139 (287)
T ss_pred ecCCCCHHHH-HHh----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcE
Confidence 9998865533 211 235689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC--CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC---
Q 008127 257 KATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--- 330 (577)
Q Consensus 257 kl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~--- 330 (577)
||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+....+...
T Consensus 140 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 219 (287)
T cd07848 140 KLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGP 219 (287)
T ss_pred EEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCC
Confidence 999999998764322 2335679999999998765 4688999999999999999999999877654443332221
Q ss_pred -----------CCCCCCC--------------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 331 -----------KPDFRRK--------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 331 -----------~~~~~~~--------------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+.+... .+..+|.++.+||++||+.||++|||++++|+||||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 220 LPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred CCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0100000 012367889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=368.86 Aligned_cols=257 Identities=26% Similarity=0.382 Sum_probs=208.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcC-CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEE-----c
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFE-----D 168 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~-----~ 168 (577)
+|++.+.||+|+||.||+|.+.. +|+.||||.+....... .....+.+|+.+++.+. +||||+++++++. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 69999999999999999999854 46889999886543221 22345667888877764 5999999999885 3
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...+++||||++ ++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~---------------~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~ 144 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKV---------------PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT 144 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc
Confidence 456899999996 5888766432 234589999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+.+..+
T Consensus 145 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i 221 (290)
T cd07862 145 ---SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 221 (290)
T ss_pred ---CCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHH
Confidence 478899999999987654444456689999999998754 4688999999999999999999999988877777666
Q ss_pred HhCCCCCCC-----------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 328 LRNKPDFRR-----------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 328 ~~~~~~~~~-----------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
+........ ...+.+++.+.+|+.+||+.||++|||+.++|+||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 222 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 542211000 0124577889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-47 Score=356.08 Aligned_cols=257 Identities=31% Similarity=0.545 Sum_probs=234.8
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
-++|..+++||+|.||+|-+|+.+.+|+.||||++++.-.........-..|-++|+..+ ||.+..+--.|+..+.+|+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEEE
Confidence 357889999999999999999999999999999998877766667778889999999985 9999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+.||.|+-+|.+ ...|++..++.+-..|+.||.|||+++||+||||.+|.||+ .+|
T Consensus 246 VMeyanGGeLf~HLsr-----------------er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLD---kDG 305 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSR-----------------ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLD---KDG 305 (516)
T ss_pred EEEEccCceEeeehhh-----------------hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheec---cCC
Confidence 9999999999876643 47799999999999999999999999999999999999999 689
Q ss_pred CeeEEecCCCcc-cCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~-~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
++||+|||+++. +..+....++||||.|+|||++.. .|+.++|+|.+||++|||++|+.||...+...++..|+-...
T Consensus 306 HIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~ 385 (516)
T KOG0690|consen 306 HIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL 385 (516)
T ss_pred ceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc
Confidence 999999999974 455677789999999999999975 579999999999999999999999999999999999999888
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
.|++ .++++++.|+..+|.+||.+|. .+.+|.+|+||...
T Consensus 386 kFPr----~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 386 KFPR----TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred cCCc----cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 8875 5899999999999999999998 58999999999875
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=375.90 Aligned_cols=250 Identities=27% Similarity=0.484 Sum_probs=211.4
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHH-HHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI-LQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~-l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
+.||+|+||+||+|++..+|+.||||++.+...........+..|..+ ++.+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 369999999999999999999999999876533222334455666654 4566 69999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 80 ~g~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~---~~~~~kl~D 139 (323)
T cd05575 80 GGELFFHLQR-----------------ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD---SQGHVVLTD 139 (323)
T ss_pred CCCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEec
Confidence 9999876643 36789999999999999999999999999999999999998 478999999
Q ss_pred cCCCcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 261 FGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 261 FGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
||++..... .......+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+.......
T Consensus 140 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~---- 215 (323)
T cd05575 140 FGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRL---- 215 (323)
T ss_pred cCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCC----
Confidence 999875422 2333456799999999988654 5889999999999999999999999988888888887765433
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCH----HHHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rpt~----~~il~hp~f~~~ 376 (577)
.+.+++.+.++|.+||+.||.+||++ .++++||||...
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 216 KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 24678999999999999999999988 699999999763
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-45 Score=373.44 Aligned_cols=261 Identities=27% Similarity=0.485 Sum_probs=217.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||++++..+++.||||++.+...........+.+|+.++..+ +||||+++++++..++.+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEE
Confidence 3699999999999999999999999999999999764433334456688999999988 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++||+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 80 ~e~~~g~~L~~~l~~~----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~ 140 (331)
T cd05597 80 MDYYVGGDLLTLLSKF----------------EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD---KNGH 140 (331)
T ss_pred EecCCCCcHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC---CCCC
Confidence 9999999998877432 35689999999999999999999999999999999999997 4788
Q ss_pred eeEEecCCCcccCCCCCc--cccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 256 LKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
+||+|||++......... ...+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+
T Consensus 141 ~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i 220 (331)
T cd05597 141 IRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 220 (331)
T ss_pred EEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHH
Confidence 999999998765433222 23579999999999852 3577899999999999999999999988877777777
Q ss_pred HhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
......+.. ...+.+++.+.+||.+||..++.+ |+++.++++||||...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 221 MNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred HcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 664433222 123458899999999998764444 7899999999999764
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=376.48 Aligned_cols=259 Identities=30% Similarity=0.478 Sum_probs=207.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC-----Ce
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD-----NY 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~-----~~ 171 (577)
+|++.+.||+|+||.||+|++..+|..||||++..... .......+.+|+.+++.+ +||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCce
Confidence 58999999999999999999999999999999864321 122345688999999999 599999999988543 35
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||. ++|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 79 ~~lv~e~~~-~~L~~~l~~-----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~--- 137 (338)
T cd07859 79 IYVVFELME-SDLHQVIKA-----------------NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILAN--- 137 (338)
T ss_pred EEEEEecCC-CCHHHHHHh-----------------cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---
Confidence 899999995 688776532 35689999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCC----CccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||+++...... .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+....+
T Consensus 138 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~ 217 (338)
T cd07859 138 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 217 (338)
T ss_pred CCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Confidence 47899999999997643211 1234679999999998764 5688999999999999999999999776543322
Q ss_pred HHHHh---------------------------CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 325 KEVLR---------------------------NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 325 ~~i~~---------------------------~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..+.. ..+......++.+++.+.++|.+||..||.+|||+.++|+||||+...
T Consensus 218 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 218 DLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred HHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence 21110 001011112356788999999999999999999999999999998765
Q ss_pred C
Q 008127 378 D 378 (577)
Q Consensus 378 ~ 378 (577)
.
T Consensus 298 ~ 298 (338)
T cd07859 298 K 298 (338)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-45 Score=373.01 Aligned_cols=250 Identities=31% Similarity=0.556 Sum_probs=212.6
Q ss_pred eeecccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 102 KLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
+.||+|+||.||+|++. .+++.||||++.+.... .......+.+|+.+++.+ +||||++++++|..++.+|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEEEEe
Confidence 57999999999999864 47889999998754321 122345678899999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 81 ~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~k 140 (323)
T cd05584 81 YLSGGELFMHLER-----------------EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLD---AQGHVK 140 (323)
T ss_pred CCCCchHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEE
Confidence 9999999887643 36688899999999999999999999999999999999998 478999
Q ss_pred EEecCCCcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 258 ATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 258 l~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
|+|||+++.... .......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+......+..+..+...++
T Consensus 141 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~ 220 (323)
T cd05584 141 LTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP 220 (323)
T ss_pred EeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 999999875332 2233456899999999988654 58899999999999999999999998888777888877654433
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
+.+++.+.+||.+||..||++|| ++.++++||||+..
T Consensus 221 ----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 221 ----PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred ----CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 45789999999999999999999 89999999999864
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-45 Score=364.89 Aligned_cols=252 Identities=27% Similarity=0.445 Sum_probs=208.0
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||+|+||+||+|.+..+|+.||||.+...........+.+..|+.+++.+ +||||+++++++..++.+|+||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 79999999999999999999999998765433333456678899999999 59999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+.+... ......+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||+
T Consensus 80 L~~~~~~~-------------~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~ 143 (280)
T cd05608 80 LRYHIYNV-------------DEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD---NDGNVRISDLGL 143 (280)
T ss_pred HHHHHHhc-------------cccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCcc
Confidence 98766322 11345789999999999999999999999999999999999998 478899999999
Q ss_pred CcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh----HHHHHHHhCCCCCCCC
Q 008127 264 SDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRRK 337 (577)
Q Consensus 264 a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~----~~~~~i~~~~~~~~~~ 337 (577)
+....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||...... .....+..... .
T Consensus 144 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~----~ 219 (280)
T cd05608 144 AVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV----T 219 (280)
T ss_pred ceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC----C
Confidence 97654432 2335679999999998865 4588999999999999999999999765432 22222222221 2
Q ss_pred CCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 338 PWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 338 ~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..+.+++.+.+++.+||+.||++|| |++++++||||+..
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 220 YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 2245889999999999999999999 88999999999863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-46 Score=377.74 Aligned_cols=250 Identities=28% Similarity=0.506 Sum_probs=212.9
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
||+|+||.||+|++..+|+.||||++.+..............|..++..+. +||||+++++++.....+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999987654332334445566777777664 799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 g~L~~~l~~-----------------~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~---~~~~~kl~Df 140 (330)
T cd05586 81 GELFWHLQK-----------------EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD---ATGHIALCDF 140 (330)
T ss_pred ChHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEecC
Confidence 999876643 36789999999999999999999999999999999999998 4788999999
Q ss_pred CCCcccCC-CCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 262 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 262 Gla~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
|++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+..+...++.
T Consensus 141 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-- 218 (330)
T cd05586 141 GLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK-- 218 (330)
T ss_pred CcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC--
Confidence 99875432 233345789999999998864 3588999999999999999999999998888888888776554433
Q ss_pred CCCCCHHHHHHHHHccccCcCCCC----CHHHHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARL----TAAQALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rp----t~~~il~hp~f~~~ 376 (577)
..+++++.+||.+||..||.+|| ++.++++||||+..
T Consensus 219 -~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 219 -NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred -ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 34789999999999999999998 79999999999864
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-45 Score=371.67 Aligned_cols=251 Identities=25% Similarity=0.436 Sum_probs=209.6
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++.++.+||||+.+++++...+.+|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654433445667889999999987899999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
|+|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 81 ~~L~~~~~~-----------------~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~---~~~~~kl~Df 140 (327)
T cd05617 81 GDLMFHMQR-----------------QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDY 140 (327)
T ss_pred CcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe---CCCCEEEecc
Confidence 999876643 36789999999999999999999999999999999999998 4788999999
Q ss_pred CCCccc-CCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCC------C-hhHHHHHHHhCCC
Q 008127 262 GLSDFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK------T-EDGIFKEVLRNKP 332 (577)
Q Consensus 262 Gla~~~-~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~------~-~~~~~~~i~~~~~ 332 (577)
|++... .........+||+.|+|||++.+ .++.++|||||||++|+|++|..||... . .......+.....
T Consensus 141 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 220 (327)
T cd05617 141 GMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI 220 (327)
T ss_pred ccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC
Confidence 998753 22333456789999999998865 4588999999999999999999999532 1 2223333433322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCC------HHHHhcCcccccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVREG 376 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt------~~~il~hp~f~~~ 376 (577)
.+ ...++..+.++|.+||..||.+|++ +.++++||||+..
T Consensus 221 ~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 221 RI----PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred CC----CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 22 2357899999999999999999998 5799999999864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-45 Score=370.66 Aligned_cols=260 Identities=27% Similarity=0.458 Sum_probs=218.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||++.++.+++.||+|++.+...........+..|+.++..+ +||+|+++++++.+.+.+|+||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEEE
Confidence 699999999999999999999999999999998654332233445688899999988 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 81 ey~~~g~L~~~l~~~----------------~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~---~~~~~ 141 (332)
T cd05623 81 DYYVGGDLLTLLSKF----------------EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHI 141 (332)
T ss_pred eccCCCcHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCE
Confidence 999999999877532 35689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCC--ccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 257 KATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 257 kl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
||+|||++........ ....+||+.|+|||++. +.++.++|||||||++|+|++|+.||.+.+..+.+..+.
T Consensus 142 kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~ 221 (332)
T cd05623 142 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 221 (332)
T ss_pred EEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHh
Confidence 9999999876533222 23457999999999875 245889999999999999999999999988888888887
Q ss_pred hCCCCCCCC-CCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRK-PWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~-~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
.....+..+ .+..+++++.+||.+||..+|.+ |+++.++++||||+..
T Consensus 222 ~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 222 NHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred CCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 654433221 23468999999999999765544 6899999999999864
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=362.28 Aligned_cols=258 Identities=26% Similarity=0.456 Sum_probs=214.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++.+.||+|+||.||+|.+..+++.||||.+.............+.+|+.+++++ +||+|+.+++.+...+.+|+||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEEEE
Confidence 377889999999999999999999999999998765443333455678899999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++|++|.+.+... ....+++..++.++.|++.||.|||+.+|+||||||+||+++ .++.+
T Consensus 80 e~~~g~~L~~~l~~~---------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~---~~~~~ 141 (285)
T cd05630 80 TLMNGGDLKFHIYHM---------------GEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHI 141 (285)
T ss_pred EecCCCcHHHHHHHh---------------cccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCE
Confidence 999999998876432 234689999999999999999999999999999999999998 47789
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh---HHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~---~~~~~i~~~~~ 332 (577)
+|+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||...... +....+.....
T Consensus 142 ~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~ 221 (285)
T cd05630 142 RISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ 221 (285)
T ss_pred EEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh
Confidence 9999999987654444455689999999998864 4688999999999999999999999765432 22222222111
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
......+++++.+|+.+||+.||.+||| +.++++||||+..
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 222 ---EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred ---hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 1123457889999999999999999999 9999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-46 Score=373.71 Aligned_cols=263 Identities=27% Similarity=0.457 Sum_probs=227.6
Q ss_pred cccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
+.++....|.-++.||+|+||.||-|++..+.+.||||.+..+.-....-...+..|+..|++|. |||++.+-++|..+
T Consensus 20 ~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-HPntieYkgCyLre 98 (948)
T KOG0577|consen 20 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-HPNTIEYKGCYLRE 98 (948)
T ss_pred ccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-CCCcccccceeecc
Confidence 44555667888999999999999999999999999999987665444456678999999999995 99999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
...|+|||||- |+-.|.+.- ...++-+-+++.|+.+.+.||.|||+++.||||||..||||+
T Consensus 99 ~TaWLVMEYCl-GSAsDlleV----------------hkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs- 160 (948)
T KOG0577|consen 99 HTAWLVMEYCL-GSASDLLEV----------------HKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS- 160 (948)
T ss_pred chHHHHHHHHh-ccHHHHHHH----------------HhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec-
Confidence 99999999995 565554432 247889999999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+.+.|||+|||.|....+. ++++|||+|||||++. |.|+-++||||||++..||.-.++|+..++....+.
T Consensus 161 --e~g~VKLaDFGSAsi~~PA---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY 235 (948)
T KOG0577|consen 161 --EPGLVKLADFGSASIMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY 235 (948)
T ss_pred --CCCeeeeccccchhhcCch---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH
Confidence 6899999999999876543 5679999999999873 788999999999999999999999999998888777
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.|..+..+... -+.+|..++.||..||++-|.+|||++++|.|+|+....+
T Consensus 236 HIAQNesPtLq--s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp 286 (948)
T KOG0577|consen 236 HIAQNESPTLQ--SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERP 286 (948)
T ss_pred HHHhcCCCCCC--CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCC
Confidence 77766543332 2456889999999999999999999999999999986543
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-45 Score=372.85 Aligned_cols=250 Identities=26% Similarity=0.471 Sum_probs=211.2
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHH-HHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI-LQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~-l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
+.||+|+||+||+|.+..+|+.||||++.+...........+..|..+ ++.+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEecCCEEEEEEcCCC
Confidence 369999999999999999999999999876533223344556667665 4556 69999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 80 ~~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~---~~~~~kL~D 139 (325)
T cd05604 80 GGELFFHLQR-----------------ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD---SQGHVVLTD 139 (325)
T ss_pred CCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEee
Confidence 9999876632 36789999999999999999999999999999999999998 478999999
Q ss_pred cCCCcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 261 FGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 261 FGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
||++..... .......+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..++.......
T Consensus 140 fG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~--- 216 (325)
T cd05604 140 FGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR--- 216 (325)
T ss_pred cCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC---
Confidence 999875432 2233456899999999988754 58899999999999999999999999888888888877554332
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCH----HHHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rpt~----~~il~hp~f~~~ 376 (577)
+.++..+.++|.+||..+|.+||++ .++++||||+..
T Consensus 217 -~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 217 -PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred -CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 4578999999999999999999977 599999999863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-45 Score=377.70 Aligned_cols=251 Identities=22% Similarity=0.377 Sum_probs=202.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|.+++.||+|+||.||+|.+..+++.||+|.... ..+.+|++++++| +||||++++++|......++|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAI-NHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeEEE
Confidence 479999999999999999999999999999996532 3467899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+|++. ++|..++.. ...+++..++.++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 162 ~e~~~-~~L~~~l~~-----------------~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~---~~~~ 220 (391)
T PHA03212 162 LPRYK-TDLYCYLAA-----------------KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN---HPGD 220 (391)
T ss_pred EecCC-CCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc---CCCC
Confidence 99994 688776543 35688999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC--CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCC-------hhHHHH
Q 008127 256 LKATDFGLSDFIKPG--KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT-------EDGIFK 325 (577)
Q Consensus 256 vkl~DFGla~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~-------~~~~~~ 325 (577)
+||+|||+|...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ....+.
T Consensus 221 vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~ 300 (391)
T PHA03212 221 VCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIK 300 (391)
T ss_pred EEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHH
Confidence 999999999754321 23345689999999998865 46889999999999999999998875432 111111
Q ss_pred HHHhCC--------------------------CC--CCCCCC---CCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 326 EVLRNK--------------------------PD--FRRKPW---PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 326 ~i~~~~--------------------------~~--~~~~~~---~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
.++... .. .....| ..++.++.+||.+||+.||.+|||+.++|+||||+
T Consensus 301 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~ 380 (391)
T PHA03212 301 LIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ 380 (391)
T ss_pred HHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence 111100 00 001111 13466899999999999999999999999999998
Q ss_pred ccC
Q 008127 375 EGG 377 (577)
Q Consensus 375 ~~~ 377 (577)
...
T Consensus 381 ~~~ 383 (391)
T PHA03212 381 DIP 383 (391)
T ss_pred cCC
Confidence 754
|
|
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=369.74 Aligned_cols=261 Identities=26% Similarity=0.461 Sum_probs=218.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||++++..+++.||+|++.+...........+..|+.++..+ +||||+++++++..++.+|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence 3699999999999999999999999999999998764332233455678899999888 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++||+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 80 ~Ey~~gg~L~~~l~~~----------------~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~---~~~~ 140 (331)
T cd05624 80 MDYYVGGDLLTLLSKF----------------EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD---MNGH 140 (331)
T ss_pred EeCCCCCcHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc---CCCC
Confidence 9999999999877532 35689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCc--cccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 256 LKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
+||+|||++......... ...+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+
T Consensus 141 ~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i 220 (331)
T cd05624 141 IRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 220 (331)
T ss_pred EEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHH
Confidence 999999999766433222 23579999999998863 4578999999999999999999999988887777777
Q ss_pred HhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
......+.. ..+..+++++.+||.+||..++.+ |+++.++++||||+..
T Consensus 221 ~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 221 MNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred HcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 765433322 223567899999999999976554 5699999999999863
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-46 Score=368.81 Aligned_cols=264 Identities=34% Similarity=0.581 Sum_probs=235.7
Q ss_pred cccceee--eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 94 FDRRYTI--GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 94 ~~~~y~~--~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+..-|+| .+.||.|.||.||-|.++++|+.||||+|.+-++-. .....+++|+.||+.+ +||.||.+---|+..+.
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~-kqesqlR~EVaILq~l-~HPGiV~le~M~ET~er 637 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT-KQESQLRNEVAILQNL-HHPGIVNLECMFETPER 637 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCC-chHHHHHHHHHHHHhc-CCCCeeEEEEeecCCce
Confidence 4445776 468999999999999999999999999999877643 3457899999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+++|||-+ .|+.++.|+.. ..++|++.....++.||+.||.|||-++|+|+||||+||||.+.+
T Consensus 638 vFVVMEKl-~GDMLEMILSs---------------EkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~ 701 (888)
T KOG4236|consen 638 VFVVMEKL-HGDMLEMILSS---------------EKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASAS 701 (888)
T ss_pred EEEEehhh-cchHHHHHHHh---------------hcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCC
Confidence 99999999 56888877543 468999999999999999999999999999999999999999877
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
.-..+||||||+|+.+....-....+|||.|+|||++..+ |+..-|+||.|||+|--++|..||.. .+++-.+|...
T Consensus 702 ~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQNA 779 (888)
T KOG4236|consen 702 PFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQNA 779 (888)
T ss_pred CCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHhhcc
Confidence 7789999999999999877666788999999999999765 57778999999999999999999943 34567778888
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..-++..+|..+++++.+||..+|+..-.+|.|.+..|.|||+++++
T Consensus 780 aFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 780 AFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred ccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 88889999999999999999999999999999999999999999864
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-44 Score=368.15 Aligned_cols=258 Identities=26% Similarity=0.370 Sum_probs=212.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|++..+|..||+|.+.... .+.....+.+|+++++.+ +||||+++++++..++.+++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEE
Confidence 57999999999999999999999999999999986542 234567799999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++ .++
T Consensus 82 ~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~---~~~ 141 (331)
T cd06649 82 MEHMDGGSLDQVLKE-----------------AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN---SRG 141 (331)
T ss_pred eecCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc---CCC
Confidence 999999999887643 25689999999999999999999986 699999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC--
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-- 331 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~-- 331 (577)
.+||+|||++...... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||......+....+-...
T Consensus 142 ~~kl~Dfg~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 220 (331)
T cd06649 142 EIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVD 220 (331)
T ss_pred cEEEccCccccccccc-ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccc
Confidence 8999999999765432 23456799999999988754 6889999999999999999999997655443322111000
Q ss_pred ------------------------------------------CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 ------------------------------------------PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ------------------------------------------~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+......+++++.+||.+||..||++|||+.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 221 GEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN 300 (331)
T ss_pred cccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00001111236789999999999999999999999999
Q ss_pred CccccccC
Q 008127 370 HPWVREGG 377 (577)
Q Consensus 370 hp~f~~~~ 377 (577)
||||+...
T Consensus 301 h~~~~~~~ 308 (331)
T cd06649 301 HTFIKRSE 308 (331)
T ss_pred ChHHhhcc
Confidence 99998643
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=361.87 Aligned_cols=257 Identities=26% Similarity=0.406 Sum_probs=207.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEc-----C
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFED-----D 169 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~-----~ 169 (577)
+|++.+.||+|+||.||+|.++.+|+.||+|.+...... ......+.+|+.+++.+. +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 589999999999999999999999999999998654321 112234567888877764 59999999998864 3
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
..+++||||++ ++|.+.+... ....+++..++.++.||+.||.|||+.||+||||||+|||++
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~---------------~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~- 142 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKV---------------PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT- 142 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC-
Confidence 46899999997 4787765432 234589999999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
.++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|++||.+....+.+..+.
T Consensus 143 --~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~ 220 (288)
T cd07863 143 --SGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 220 (288)
T ss_pred --CCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHH
Confidence 478899999999987654444455678999999998764 46889999999999999999999998877766655554
Q ss_pred hCCCC----------------CC-------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 329 RNKPD----------------FR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 329 ~~~~~----------------~~-------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
..... +. ....+.++..+.+||.+||+.||++|||+.+++.||||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 221 DLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred HHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 31100 00 01124577889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-45 Score=370.05 Aligned_cols=250 Identities=27% Similarity=0.469 Sum_probs=209.7
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHH-HHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI-LQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~-l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
+.||+|+||.||+|++..+++.||+|++.+...........+..|... ++.+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 369999999999999999999999999876433222233445555554 5566 69999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 80 ~~~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~---~~~~~kl~D 139 (325)
T cd05602 80 GGELFYHLQR-----------------ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTD 139 (325)
T ss_pred CCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEEcc
Confidence 9999886643 35688999999999999999999999999999999999998 478899999
Q ss_pred cCCCcccC-CCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 261 FGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 261 FGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
||++.... ........+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+......+
T Consensus 140 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~---- 215 (325)
T cd05602 140 FGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL---- 215 (325)
T ss_pred CCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC----
Confidence 99997543 22334456899999999988754 5889999999999999999999999988888888877654332
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCHH----HHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARLTAA----QALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rpt~~----~il~hp~f~~~ 376 (577)
.+.+++.+.++|.+||+.||.+||++. ++++|+||...
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 216 KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 356889999999999999999999876 89999999753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-45 Score=374.54 Aligned_cols=256 Identities=27% Similarity=0.398 Sum_probs=208.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++++.||+|+||.||+|.+..+|+.||||++.... .......+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeEEEE
Confidence 46888999999999999999999999999999986543 233456789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||.+|+|.+. ...++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 151 ~e~~~~~~L~~~---------------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~ 206 (353)
T PLN00034 151 LEFMDGGSLEGT---------------------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN---SAKN 206 (353)
T ss_pred EecCCCCccccc---------------------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCC
Confidence 999999988541 3356777889999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhccc-----C-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-----K-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||++..+.... .....+||..|+|||++.. . .+.++|||||||++|+|++|+.||......+....+.
T Consensus 207 ~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~ 286 (353)
T PLN00034 207 VKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMC 286 (353)
T ss_pred EEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH
Confidence 9999999998764322 2345689999999998743 2 2568999999999999999999997443332222211
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.............++.++.+||.+||..||++|||+.++|+||||.....
T Consensus 287 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 287 AICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred HHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 11111122223467899999999999999999999999999999998643
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=373.63 Aligned_cols=255 Identities=35% Similarity=0.611 Sum_probs=234.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|.+...||+|.|++|.+|++..++..||||.|++...... ..+.+.+|+++|+.| +|||||+++.+.+....+|+|
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~-~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPS-KRQKLGREVDIMKSL-NHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChH-HHHHHHHHHHHHHhc-CCcceeeeeeeeeecceeEEE
Confidence 469999999999999999999999999999999988776443 455689999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+.+|++++++.+. ++..+..++.++.|++.|++|||+++|||||||++||||+ .+.+
T Consensus 134 ~eya~~ge~~~yl~~~-----------------gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~---~~mn 193 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKH-----------------GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD---ENMN 193 (596)
T ss_pred EEeccCchhHHHHHhc-----------------ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc---cccc
Confidence 9999999999988644 7888899999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||++.++..+....++||++.|.|||++.+.. ++.+|+||+|++||-|+.|..||.+.+..+....++.++..
T Consensus 194 ikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~r 273 (596)
T KOG0586|consen 194 IKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYR 273 (596)
T ss_pred eeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeec
Confidence 9999999999999888889999999999999998753 89999999999999999999999999999988888888776
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+. .++.++.++|+++|..+|.+|++.+++..|.|....
T Consensus 274 Ip~----~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 274 IPF----YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred ccc----eeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 664 367899999999999999999999999999997653
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-44 Score=358.34 Aligned_cols=260 Identities=28% Similarity=0.452 Sum_probs=217.5
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|++.+.||.|+||+||+|.+..+++.||+|.+.............+.+|+++++.+ +||||+.+++++..++..|+|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEEEE
Confidence 77889999999999999999999999999998765433333445678899999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++++|.+.+... ....+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+|
T Consensus 81 ~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~---~~~~~k 142 (285)
T cd05632 81 IMNGGDLKFHIYNM---------------GNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGHIR 142 (285)
T ss_pred eccCccHHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC---CCCCEE
Confidence 99999998766432 234689999999999999999999999999999999999998 467899
Q ss_pred EEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008127 258 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336 (577)
Q Consensus 258 l~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~ 336 (577)
|+|||++.............|++.|+|||++.+ .++.++|+|||||++|+|++|..||.+.........+.........
T Consensus 143 l~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~ 222 (285)
T cd05632 143 ISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE 222 (285)
T ss_pred EecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc
Confidence 999999976654444455689999999998754 4688999999999999999999999877665444444332222222
Q ss_pred CCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 337 KPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 337 ~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
...+.++.++.+|+.+||..||++||| +.+++.||||+..
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 223 VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 233568899999999999999999999 8999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-46 Score=377.17 Aligned_cols=259 Identities=31% Similarity=0.471 Sum_probs=224.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|.|+..||.|+||+||+|.++.++-..|.|+|.-.. ....+.+.-||+||..+ +||+||++++.|..++.+||+
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks---eEELEDylVEIeILa~C-dHP~ivkLl~ayy~enkLwil 107 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS---EEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENKLWIL 107 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc---hhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCceEEE
Confidence 45788889999999999999999999888999986543 46788899999999998 699999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
.|||.||-+...+.. -...|++.++..+++|+|.||.|||+++|||||||..|||++. +|.
T Consensus 108 iEFC~GGAVDaimlE----------------L~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl---dGd 168 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLE----------------LGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL---DGD 168 (1187)
T ss_pred EeecCCchHhHHHHH----------------hccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe---cCc
Confidence 999999987665543 3578999999999999999999999999999999999999994 789
Q ss_pred eeEEecCCCcccC-CCCCccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
|+|+|||.+.... .......++|||+|||||+.. ..|..++||||||++|.||.-+.+|-..-++..++.+|.
T Consensus 169 irLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKia 248 (1187)
T KOG0579|consen 169 IRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 248 (1187)
T ss_pred EeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHh
Confidence 9999999886543 223446789999999999863 346889999999999999999999998889988888888
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
+..++.... +..++..+.||+++||.+||..||++.++|+||||+....
T Consensus 249 KSePPTLlq-PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 249 KSEPPTLLQ-PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred hcCCCcccC-cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 766554322 2456789999999999999999999999999999997644
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=368.12 Aligned_cols=250 Identities=26% Similarity=0.462 Sum_probs=209.5
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHH-HHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK-ILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~-~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
+.||+|+||.||+|++..+|+.||+|++.+...........+.+|+. +++.+ +||||+++++++...+.+|+|||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEEEEcCCC
Confidence 36999999999999999999999999987654322333455666665 46667 69999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 80 ~~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~---~~~~~kl~D 139 (321)
T cd05603 80 GGELFFHLQR-----------------ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD---SQGHVVLTD 139 (321)
T ss_pred CCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEcc
Confidence 9999776532 36788999999999999999999999999999999999998 478999999
Q ss_pred cCCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 261 FGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 261 FGla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
||++.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+......++
T Consensus 140 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~--- 216 (321)
T cd05603 140 FGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP--- 216 (321)
T ss_pred CCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC---
Confidence 99987532 2223345689999999998865 458899999999999999999999999888888887776544332
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCH----HHHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rpt~----~~il~hp~f~~~ 376 (577)
+..+..+.++|.+||+.||.+||++ .++++||||...
T Consensus 217 -~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 217 -GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred -CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 4578899999999999999999975 599999999753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-45 Score=369.28 Aligned_cols=249 Identities=29% Similarity=0.520 Sum_probs=213.1
Q ss_pred eeecccCCeEEEEEEE---cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEec
Q 008127 102 KLLGHGQFGYTYVATD---KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~---~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 178 (577)
+.||+|+||.||++++ ..+|+.||+|++.+.... ......+.+|+.+++++ +||||+++++++..++.+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEEcC
Confidence 5799999999999986 357899999998764321 22345677899999999 599999999999999999999999
Q ss_pred cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeE
Q 008127 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258 (577)
Q Consensus 179 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl 258 (577)
+++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 80 ~~~~~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kL 139 (318)
T cd05582 80 LRGGDLFTRLSK-----------------EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKL 139 (318)
T ss_pred CCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC---CCCcEEE
Confidence 999999887643 35689999999999999999999999999999999999998 4788999
Q ss_pred EecCCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008127 259 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336 (577)
Q Consensus 259 ~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~ 336 (577)
+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+.+..+......++
T Consensus 140 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p- 218 (318)
T cd05582 140 TDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP- 218 (318)
T ss_pred eeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC-
Confidence 999999765433 233456899999999998754 58899999999999999999999998888888888776654433
Q ss_pred CCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 337 KPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 337 ~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
..+++.+.+||.+||+.||.+||| +.+++.||||+..
T Consensus 219 ---~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 219 ---QFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred ---CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 357899999999999999999999 7889999999864
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-44 Score=381.90 Aligned_cols=260 Identities=25% Similarity=0.336 Sum_probs=203.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc-----CCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-----GHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpniv~~~~~~~~~ 169 (577)
..+|+++++||+|+||.||+|.+..+++.||||++.... .....+..|+.+++.+. +|+++++++++|..+
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 468999999999999999999999999999999986432 23445667888887774 345689999988764
Q ss_pred -CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEe
Q 008127 170 -NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLF 247 (577)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl 247 (577)
+++|+|||++ |++|.+++.. ...+++..++.++.||+.||.|||+ .|||||||||+|||+
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~-----------------~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl 265 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMK-----------------HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILM 265 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE
Confidence 5799999998 7788876643 3678999999999999999999998 599999999999999
Q ss_pred ecCC-------------CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCC
Q 008127 248 KSAK-------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 248 ~~~~-------------~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~ 313 (577)
+..+ +...+||+|||++.... ......+||+.|+|||++.+ .++.++|||||||++|||++|++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~ 343 (467)
T PTZ00284 266 ETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKL 343 (467)
T ss_pred ecCCcccccccccccCCCCceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 8422 11259999999886432 22345789999999998865 46889999999999999999999
Q ss_pred CCCCCChhHHHHHHHhCCCCCCC----------------------C--------------CCC--CCCHHHHHHHHHccc
Q 008127 314 PFWDKTEDGIFKEVLRNKPDFRR----------------------K--------------PWP--SISNSAKDFVKKLLV 355 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~~~~~~~~----------------------~--------------~~~--~~s~~~~~li~~~l~ 355 (577)
||.+.+..+.+..+......++. . .+. ..++.+.+||.+||+
T Consensus 344 pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 423 (467)
T PTZ00284 344 LYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLH 423 (467)
T ss_pred CCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCC
Confidence 99877665544433221110000 0 000 013457899999999
Q ss_pred cCcCCCCCHHHHhcCccccccCC
Q 008127 356 KDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 356 ~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
+||.+|||+.|+|+||||+....
T Consensus 424 ~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 424 YDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred cChhhCCCHHHHhcCccccccCC
Confidence 99999999999999999998654
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-44 Score=357.25 Aligned_cols=251 Identities=27% Similarity=0.423 Sum_probs=207.0
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||+|+||.||++.++.+|+.||+|.+.............+..|+++++.+ +||||+++++++..+..+|+||||++|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 79999999999999999999999998754432222344566799999999 59999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+.+... ....+++..+..++.||+.||.|||+.||+||||||+||+++ .++.++|+|||+
T Consensus 80 L~~~~~~~---------------~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~~l~Dfg~ 141 (277)
T cd05607 80 LKYHIYNV---------------GERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGL 141 (277)
T ss_pred HHHHHHhc---------------cccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc---CCCCEEEeecee
Confidence 98766432 234588899999999999999999999999999999999998 478899999999
Q ss_pred CcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh----hHHHHHHHhCCCCCCCCC
Q 008127 264 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 264 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~----~~~~~~i~~~~~~~~~~~ 338 (577)
+.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||..... .++..........+ .
T Consensus 142 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~ 218 (277)
T cd05607 142 AVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF---E 218 (277)
T ss_pred eeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc---c
Confidence 987655444445679999999998764 468899999999999999999999976433 23333333332222 2
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCH----HHHhcCcccccc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 376 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rpt~----~~il~hp~f~~~ 376 (577)
...+++++.+||.+||..||.+||++ ++++.||||+..
T Consensus 219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 24578999999999999999999999 778899999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-44 Score=364.27 Aligned_cols=260 Identities=25% Similarity=0.430 Sum_probs=212.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.+.+.||+|+||.||+|+++.+++.||+|.+..... ......+.+|+.+++++ +||||+++++++..++.+|+|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEEEE
Confidence 469999999999999999999999999999999865432 12334577899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++ +|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 83 ~e~~~~-~l~~~~~~~----------------~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~---~~~~ 142 (309)
T cd07872 83 FEYLDK-DLKQYMDDC----------------GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN---ERGE 142 (309)
T ss_pred EeCCCC-CHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCC
Confidence 999974 777655322 34578999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... .......+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+....+.....
T Consensus 143 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 222 (309)
T cd07872 143 LKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLG 222 (309)
T ss_pred EEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 999999999764322 22334578999999998754 458899999999999999999999988776655544432111
Q ss_pred C-------------------CCC-------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 333 D-------------------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 333 ~-------------------~~~-------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
. ++. ...+.+++++.+||.+||..||.+|||+.++++||||+....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 294 (309)
T cd07872 223 TPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGT 294 (309)
T ss_pred CCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhccc
Confidence 0 000 112357889999999999999999999999999999997543
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-44 Score=392.61 Aligned_cols=270 Identities=27% Similarity=0.476 Sum_probs=220.7
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-- 168 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-- 168 (577)
.+.+..+|++++.||.|+||.||+|.+..++..||+|.+..... .......+..|+.++..|. |||||+++++|..
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELK-HKNIVRYIDRFLNKA 85 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEecC
Confidence 34455689999999999999999999999999999999876543 2335677899999999995 9999999998854
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-------CceeccCC
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-------GLVHRDMK 241 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-------~iiHrDlK 241 (577)
...+|||||||++|+|.+.|... ......+++..++.|+.||+.||.|||+. +|||||||
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~-------------~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLK 152 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKC-------------YKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLK 152 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHH-------------hhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCc
Confidence 46799999999999999887543 11235789999999999999999999985 49999999
Q ss_pred CCcEEeecC--------------CCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc---CCCCCCchhhHHHH
Q 008127 242 PENFLFKSA--------------KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVI 304 (577)
Q Consensus 242 p~NILl~~~--------------~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~i 304 (577)
|+||||+.. +....+||+|||++..+.........+||+.|+|||++.+ .++.++||||||||
T Consensus 153 PeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~I 232 (1021)
T PTZ00266 153 PQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCI 232 (1021)
T ss_pred HHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHH
Confidence 999999641 1234699999999987654444456689999999998853 35789999999999
Q ss_pred HHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 305 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 305 l~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
||+|++|..||........+...+...+.+ +.+..+.++.+||..||..+|.+||++.++|.||||+....
T Consensus 233 LYELLTGk~PF~~~~~~~qli~~lk~~p~l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~ 303 (1021)
T PTZ00266 233 IYELCSGKTPFHKANNFSQLISELKRGPDL---PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGP 303 (1021)
T ss_pred HHHHHHCCCCCCcCCcHHHHHHHHhcCCCC---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCC
Confidence 999999999998765554444444433322 23457899999999999999999999999999999986543
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-44 Score=380.68 Aligned_cols=258 Identities=28% Similarity=0.458 Sum_probs=220.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC-CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN-GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~-~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..|.+.+.||+|+||.||+|.+..+ +..||+|.+.... ......+.+|+.+++.+ +|||||++++++...+.+||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~---~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND---ERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC---HHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEEE
Confidence 4599999999999999999998877 7889999775432 33456678899999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||++||+|.+.+... ......+++..+..++.||+.||.|||+++|+||||||+|||++ .++
T Consensus 143 v~E~~~gg~L~~~l~~~-------------~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~---~~~ 206 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQR-------------LKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM---PTG 206 (478)
T ss_pred EEECCCCCCHHHHHHHH-------------HhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC---CCC
Confidence 99999999999877542 12345789999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCC---CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
.+||+|||+++...... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+++..++.+
T Consensus 207 ~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~ 286 (478)
T PTZ00267 207 IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYG 286 (478)
T ss_pred cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 89999999998764332 13456799999999988654 688999999999999999999999988888888887765
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.... ....++.++.+||.+||..||++||++.+++.|||++..
T Consensus 287 ~~~~---~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 287 KYDP---FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred CCCC---CCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 4321 124578999999999999999999999999999999753
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-44 Score=370.20 Aligned_cols=259 Identities=30% Similarity=0.453 Sum_probs=207.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 170 (577)
+.++|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.+ +||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCCcc
Confidence 44689999999999999999999999999999999865422 223456778999999999 5999999999986543
Q ss_pred ---eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 171 ---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
.+|+||||+.+ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~-------------------~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~ 156 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIH-------------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 156 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHh-------------------ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence 57999999965 5554331 347888999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ .++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..
T Consensus 157 ~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~ 233 (359)
T cd07876 157 K---SDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNK 233 (359)
T ss_pred C---CCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 8 478999999999986654444456789999999998865 468899999999999999999999987654433322
Q ss_pred HH----------------------hCCCCCCCCC----------------CCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 327 VL----------------------RNKPDFRRKP----------------WPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 327 i~----------------------~~~~~~~~~~----------------~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
+. ...+.++... ....++.+.+||.+||..||++|||+.++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l 313 (359)
T cd07876 234 VIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEAL 313 (359)
T ss_pred HHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHh
Confidence 21 1111111100 012356789999999999999999999999
Q ss_pred cCccccccC
Q 008127 369 SHPWVREGG 377 (577)
Q Consensus 369 ~hp~f~~~~ 377 (577)
+||||+...
T Consensus 314 ~hp~~~~~~ 322 (359)
T cd07876 314 RHPYITVWY 322 (359)
T ss_pred cCchhhhhc
Confidence 999998643
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-44 Score=379.70 Aligned_cols=263 Identities=27% Similarity=0.459 Sum_probs=222.2
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC--
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-- 170 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-- 170 (577)
....+|.+.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.++..+ +|+||+++++.+....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcC-CCCcEEEeecceeccccc
Confidence 345689999999999999999999999999999999876543 234566788999999998 5999999988775322
Q ss_pred ------eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCc
Q 008127 171 ------YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 171 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~N 244 (577)
.+++||||+++|+|.+.+... ......+++..++.++.||+.||.|||+.+|+||||||+|
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~-------------~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~N 173 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSR-------------AKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSAN 173 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHh-------------hccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence 478999999999999887543 1234578999999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCC---CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
||++ .++.+||+|||+++..... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+.
T Consensus 174 ILl~---~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~ 250 (496)
T PTZ00283 174 ILLC---SNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM 250 (496)
T ss_pred EEEe---CCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 9998 4789999999999765432 223456899999999998754 68899999999999999999999998888
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+.+..++.+.... ..+.+++++.+|+.+||..||.+||++.++++|||++..
T Consensus 251 ~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 251 EEVMHKTLAGRYDP---LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred HHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 88888777654332 235688999999999999999999999999999998864
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-47 Score=350.08 Aligned_cols=262 Identities=26% Similarity=0.470 Sum_probs=222.9
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.+...+-|.++.+||+|+||.||+|.++.+|..+|||.+.... ..+++..|+.|+++. ..|++|++|+.|-...
T Consensus 28 ~K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-----DLQEIIKEISIMQQC-~S~yVVKYYGSYFK~s 101 (502)
T KOG0574|consen 28 NKPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-----DLQEIIKEISIMQQC-KSKYVVKYYGSYFKHS 101 (502)
T ss_pred cCChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-----hHHHHHHHHHHHHHc-CCchhhhhhhhhccCC
Confidence 3445567999999999999999999999999999999987653 678899999999998 5999999999998888
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|||||||..|++.|.+.. ++.+|++.++..+++.-+.||+|||...-||||||..||||+
T Consensus 102 DLWIVMEYCGAGSiSDI~R~----------------R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN-- 163 (502)
T KOG0574|consen 102 DLWIVMEYCGAGSISDIMRA----------------RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN-- 163 (502)
T ss_pred ceEeehhhcCCCcHHHHHHH----------------hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc--
Confidence 99999999999999997753 358899999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCC-CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
.+++.||+|||.|..+.+. ...++.+|||.|||||++.. .|..++||||||++..||..|++||.+-.+....-.|-
T Consensus 164 -T~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP 242 (502)
T KOG0574|consen 164 -TDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP 242 (502)
T ss_pred -ccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc
Confidence 4899999999999876543 23467899999999999875 68999999999999999999999997655433222222
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
...+. .......+|.++.+||+.||.++|++|-||.++++|||++....
T Consensus 243 T~PPP-TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 243 TKPPP-TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPG 291 (502)
T ss_pred CCCCC-CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence 22221 12222456889999999999999999999999999999998654
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=331.07 Aligned_cols=261 Identities=25% Similarity=0.397 Sum_probs=223.2
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+.+++..||.|+.|.||+++.+.+|...|||.+.+... ....+.+++.++++..-.++|+||+.+++|..+..++|.|
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N--kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM 170 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM 170 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC--HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence 35567789999999999999999999999999987653 4567788899998877656899999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|.|. .-.+.|+.. -.++++|..+-.+...++.||.||.. +||||||+||+|||++ +.|+
T Consensus 171 elMs--~C~ekLlkr---------------ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlD---e~Gn 230 (391)
T KOG0983|consen 171 ELMS--TCAEKLLKR---------------IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGN 230 (391)
T ss_pred HHHH--HHHHHHHHH---------------hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEc---cCCC
Confidence 9984 344544433 24679999999999999999999986 6999999999999999 6899
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCC-ChhHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRN 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~-~~~~~~~~i~~~ 330 (577)
|||||||++..+.++.......|.+.|||||.+.. +|...+||||||+.|+||+||..||.+. ++.+++..++..
T Consensus 231 iKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ 310 (391)
T KOG0983|consen 231 IKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE 310 (391)
T ss_pred EEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc
Confidence 99999999998887777778899999999999863 4678899999999999999999999874 567888888886
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCC
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~ 380 (577)
.+.... .-..+|+.+++|+..||++|+.+||...++|+|||++.+....
T Consensus 311 ePP~L~-~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a~ 359 (391)
T KOG0983|consen 311 EPPLLP-GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETAE 359 (391)
T ss_pred CCCCCC-cccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchhh
Confidence 553222 2234899999999999999999999999999999999886543
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-45 Score=356.48 Aligned_cols=258 Identities=27% Similarity=0.479 Sum_probs=227.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|+.-++||+|+||.||-++-+.||+-||+|.+.+.............+|-.||.++ +.|.||.+--.|+..+.+|+|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCCceEEE
Confidence 3578888999999999999999999999999999887665556667788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+..|.||+|.-+|.+. .+..|+++.++.++.+|+.||++||..+||+|||||+||||+ +.|+
T Consensus 264 LtlMNGGDLkfHiyn~---------------g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLD---d~Gh 325 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNH---------------GNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLD---DHGH 325 (591)
T ss_pred EEeecCCceeEEeecc---------------CCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeec---cCCC
Confidence 9999999997766543 235799999999999999999999999999999999999999 6899
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh----hHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRN 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~----~~~~~~i~~~ 330 (577)
|+|+|+|||..+..+......+||.+|||||++.+ .|+...|+|||||+||||+.|+.||....+ .++-+.++..
T Consensus 326 vRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~ 405 (591)
T KOG0986|consen 326 VRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED 405 (591)
T ss_pred eEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc
Confidence 99999999999988888888899999999999864 578999999999999999999999966433 3444555555
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
...++ ..+|+++++|.+.+|++||.+|. ++.++.+||||+..
T Consensus 406 ~~ey~----~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 406 PEEYS----DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred hhhcc----cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 54444 46899999999999999999998 67899999999974
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=360.97 Aligned_cols=256 Identities=26% Similarity=0.402 Sum_probs=209.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..++..+|+|.+.... .......+.+|+++++.+ +||||++++++|..++.+|+|
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEEEE
Confidence 57999999999999999999999999999999886542 233556789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++ .++
T Consensus 82 ~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~---~~~ 141 (333)
T cd06650 82 MEHMDGGSLDQVLKK-----------------AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRG 141 (333)
T ss_pred EecCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc---CCC
Confidence 999999999887743 25688999999999999999999985 799999999999998 467
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH------
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV------ 327 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i------ 327 (577)
.+||+|||++...... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........+
T Consensus 142 ~~kL~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 220 (333)
T cd06650 142 EIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEG 220 (333)
T ss_pred CEEEeeCCcchhhhhh-ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccC
Confidence 8999999998765322 22445799999999988754 588999999999999999999999755433221111
Q ss_pred --------------------------------------HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 --------------------------------------LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 --------------------------------------~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..... +......++.++.+||.+||++||.+|||+.+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 221 DPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPP--PKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred CccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCC--ccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 00000 00001125678999999999999999999999999
Q ss_pred CccccccC
Q 008127 370 HPWVREGG 377 (577)
Q Consensus 370 hp~f~~~~ 377 (577)
||||+...
T Consensus 299 h~~~~~~~ 306 (333)
T cd06650 299 HAFIKRSE 306 (333)
T ss_pred CHHHhcCc
Confidence 99998653
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-43 Score=364.26 Aligned_cols=258 Identities=28% Similarity=0.430 Sum_probs=208.9
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++.+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.+ +||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-CchhHHHHHHHHHHHHhc-CCCCccccceeeccccccc
Confidence 34689999999999999999999999999999999865432 223456678999999999 599999999987643
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|+||||+++ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 100 ~~~~~~lv~e~~~~-~l~~~~~-------------------~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll 159 (364)
T cd07875 100 EFQDVYIVMELMDA-NLCQVIQ-------------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159 (364)
T ss_pred ccCeEEEEEeCCCC-CHHHHHH-------------------hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE
Confidence 357999999965 6655442 347788899999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ .++.+||+|||+++............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..
T Consensus 160 ~---~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~ 236 (364)
T cd07875 160 K---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236 (364)
T ss_pred C---CCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 8 478899999999987655444456789999999998865 458899999999999999999999988776665555
Q ss_pred HHhCC----------------------CCCCCC----------------CCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 327 VLRNK----------------------PDFRRK----------------PWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 327 i~~~~----------------------~~~~~~----------------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
++... +.+... .....+..+.+||.+||..||.+|||+.++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L 316 (364)
T cd07875 237 VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316 (364)
T ss_pred HHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 54311 111000 0011345789999999999999999999999
Q ss_pred cCcccccc
Q 008127 369 SHPWVREG 376 (577)
Q Consensus 369 ~hp~f~~~ 376 (577)
+||||...
T Consensus 317 ~hp~~~~~ 324 (364)
T cd07875 317 QHPYINVW 324 (364)
T ss_pred cCcccccc
Confidence 99999753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-44 Score=352.74 Aligned_cols=254 Identities=40% Similarity=0.690 Sum_probs=209.7
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|++++.||+|+||.||+|.+..+++.||+|++...... ........+|+.+++++ .||||+++++++.....+++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE-EEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH-HHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccc-ccccchhhhhhhccccc-ccccccccccccccccccccccc
Confidence 88999999999999999999999999999999876432 12223345699999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++++|.+++.. ...+++..+..++.||+.||.+||+.||+||||||+||+++ .++.++
T Consensus 79 ~~~~~~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~---~~~~~~ 138 (260)
T PF00069_consen 79 YCPGGSLQDYLQK-----------------NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD---ENGEVK 138 (260)
T ss_dssp EETTEBHHHHHHH-----------------HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES---TTSEEE
T ss_pred ccccccccccccc-----------------ccccccccccccccccccccccccccccccccccccccccc---cccccc
Confidence 9999999987752 26789999999999999999999999999999999999998 578899
Q ss_pred EEecCCCccc-CCCCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCCCCCCC---hhHHHHHHHhCC
Q 008127 258 ATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNK 331 (577)
Q Consensus 258 l~DFGla~~~-~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~Pf~~~~---~~~~~~~i~~~~ 331 (577)
|+|||.+... ..........+|+.|+|||++. ...+.++||||||+++|+|++|..||.... ............
T Consensus 139 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~ 218 (260)
T PF00069_consen 139 LIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRP 218 (260)
T ss_dssp ESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccc
Confidence 9999999763 3334455678999999999987 445889999999999999999999998773 233333333221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
...........++.+.++|.+||+.||++|||+.++++||||
T Consensus 219 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 219 LPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 111111111234789999999999999999999999999998
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=355.65 Aligned_cols=259 Identities=25% Similarity=0.427 Sum_probs=211.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.+.+.||.|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEEEE
Confidence 469999999999999999999999999999999865432 12334577899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++ ++|.+.+... ...+++..+..++.||+.||.|||+.||+||||||+|||++ .++.
T Consensus 83 ~e~~~-~~l~~~l~~~----------------~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~ 142 (301)
T cd07873 83 FEYLD-KDLKQYLDDC----------------GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN---ERGE 142 (301)
T ss_pred Eeccc-cCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC---CCCc
Confidence 99996 5887765432 35688999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... .......+++.|+|||++.+. ++.++|||||||++|+|++|++||.+.+..+....+.....
T Consensus 143 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~ 222 (301)
T cd07873 143 LKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILG 222 (301)
T ss_pred EEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 999999998764322 223345678999999987653 57889999999999999999999988776655544332111
Q ss_pred C-------------------CCC-------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 D-------------------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~-------------------~~~-------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
. ++. ...+.+++.+.+||.+||+.||.+|||+.++|+||||+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 223 TPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred CCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 0 000 01235788999999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=368.61 Aligned_cols=257 Identities=30% Similarity=0.459 Sum_probs=209.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----e
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-----Y 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~ 171 (577)
+|++++.||+|+||.||+|.+..+|+.||||.+..... .......+.+|+.+++.+ +||||+++++++...+ .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-NLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc-chHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccce
Confidence 37889999999999999999999999999998864321 223456788999999999 4999999999998776 7
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+||||+. ++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 79 ~~lv~e~~~-~~l~~~~~-----------------~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~--- 137 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIV-----------------SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN--- 137 (372)
T ss_pred EEEEeeccc-cCHHHHHh-----------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEEC---
Confidence 999999996 57766553 236789999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCC--CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG--KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~--~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.++.+||+|||++...... .......+|+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+
T Consensus 138 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i 217 (372)
T cd07853 138 SNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLI 217 (372)
T ss_pred CCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 4789999999999765432 223345789999999988753 588999999999999999999999887766555444
Q ss_pred HhC-----------------------CCCCCC-----CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 LRN-----------------------KPDFRR-----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~-----------------------~~~~~~-----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
... ....+. ......++++.+||.+||+.||.+|||+.++|+||||+..
T Consensus 218 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 218 TDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 321 000000 1123467899999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=364.25 Aligned_cols=258 Identities=28% Similarity=0.444 Sum_probs=207.4
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++.+.||+|+||.||+|.+..+++.||||.+..... .......+.+|+.+++.+ +||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHh-CCCchhceeeeeecccccc
Confidence 44689999999999999999999999999999999865432 223456778899999999 599999999988643
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|+||||+++ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~-------------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill 152 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQ-------------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 152 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHh-------------------hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE
Confidence 357999999965 5655431 347888899999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ .++.+||+|||+++............||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+.+..
T Consensus 153 ~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 229 (355)
T cd07874 153 K---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229 (355)
T ss_pred C---CCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 8 4788999999999876554445567899999999988654 58899999999999999999999987765444333
Q ss_pred HHhC----------------------CCCCCC----------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 327 VLRN----------------------KPDFRR----------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 327 i~~~----------------------~~~~~~----------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
++.. .+.+.. ......+..+.+||.+||..||++|||+.++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell 309 (355)
T cd07874 230 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEAL 309 (355)
T ss_pred HHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHh
Confidence 2211 111000 00112356789999999999999999999999
Q ss_pred cCcccccc
Q 008127 369 SHPWVREG 376 (577)
Q Consensus 369 ~hp~f~~~ 376 (577)
+||||...
T Consensus 310 ~hp~~~~~ 317 (355)
T cd07874 310 QHPYINVW 317 (355)
T ss_pred cCcchhcc
Confidence 99999754
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-44 Score=365.30 Aligned_cols=259 Identities=29% Similarity=0.491 Sum_probs=209.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++++.||.|+||.||+|.+..+++.||||.+..... .......+.+|+.+++.+ +||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhc-CCCchhhhhhhhccccccc
Confidence 34689999999999999999999999999999999865422 122345677899999999 599999999987543
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|++++++ +++|.+.+ ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~------------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~ 151 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIV------------------KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV 151 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHH------------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE
Confidence 4579999998 77886644 23568999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+ .++.+||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+.
T Consensus 152 ~---~~~~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 226 (343)
T cd07878 152 N---EDCELRILDFGLARQADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLK 226 (343)
T ss_pred C---CCCCEEEcCCccceecCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 8 478899999999986543 3345689999999998865 45889999999999999999999998766554444
Q ss_pred HHHhCC-----------------------CCCCC----CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNK-----------------------PDFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~-----------------------~~~~~----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+.... +..+. ..+...++.+.+||.+||..||.+|||+.++|+||||.....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 227 RIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred HHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 432211 00110 012245677899999999999999999999999999987544
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-43 Score=350.29 Aligned_cols=253 Identities=33% Similarity=0.579 Sum_probs=220.2
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+++++++. ||||+++++++...+.+|+||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEEE
Confidence 6999999999999999999999999999999987654433445677899999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++.. ...+++..+..++.||+.||.|||+.||+||||+|+|||++ .++.+
T Consensus 81 e~~~~~~L~~~~~~-----------------~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~---~~~~~ 140 (290)
T cd05580 81 EYVPGGELFSHLRK-----------------SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD---SDGYI 140 (290)
T ss_pred ecCCCCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCE
Confidence 99999999887643 26789999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
||+|||++...... .....|++.|+|||.+.+. .+.++||||||+++|+|++|..||...........+..+...++
T Consensus 141 kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 218 (290)
T cd05580 141 KITDFGFAKRVKGR--TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP 218 (290)
T ss_pred EEeeCCCccccCCC--CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC
Confidence 99999999876543 3445789999999987654 57889999999999999999999988777667777765544433
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..++..+.++|.+||..||.+|+ ++.++++||||+..
T Consensus 219 ----~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 219 ----SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred ----ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 34688999999999999999999 99999999999764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-44 Score=356.26 Aligned_cols=258 Identities=28% Similarity=0.480 Sum_probs=204.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
+..|++++.||+||.++||++.. .+.+.||+|.+..... .......+.+|+.+|.+|++|.+||++|+|-..++++||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~-D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEA-DNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhc-CHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 45799999999999999999984 3456777776644332 356788899999999999999999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||- ..+|...|.+. ....+...++.|..|+|.|+.++|.+||||.||||.|+|+- .|
T Consensus 438 vmE~G-d~DL~kiL~k~----------------~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG 496 (677)
T KOG0596|consen 438 VMECG-DIDLNKILKKK----------------KSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KG 496 (677)
T ss_pred Eeecc-cccHHHHHHhc----------------cCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----ee
Confidence 99985 45777666433 23344457889999999999999999999999999999997 68
Q ss_pred CeeEEecCCCcccCCCCC---ccccccCCccccchhccc------------CCCCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 255 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~------------~~~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
.+||+|||+|..+.+... ....+||+.|||||.+.. +.++++||||||||||+|+.|++||..-.
T Consensus 497 ~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~ 576 (677)
T KOG0596|consen 497 RLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII 576 (677)
T ss_pred eEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH
Confidence 999999999998865433 235799999999998742 13678999999999999999999995543
Q ss_pred -hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 320 -EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 320 -~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.-..+..|.....+...+..+. ..++.++++.||.+||++|||+.++|+|||++..
T Consensus 577 n~~aKl~aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 577 NQIAKLHAITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred HHHHHHHhhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcCcccccc
Confidence 2233334444333222222221 1349999999999999999999999999999753
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=358.06 Aligned_cols=258 Identities=28% Similarity=0.434 Sum_probs=194.7
Q ss_pred eeeecccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeEEEEE
Q 008127 101 GKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAM 176 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~lv~ 176 (577)
+++||+|+||.||+|+++ .+++.||+|.+..... ...+.+|+.+++++ +||||+++++++.. +..+|+||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcEEEEEE
Confidence 467999999999999865 4678999999865432 24467899999999 59999999998854 56789999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC-CCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~-~~~~~ 255 (577)
||+. ++|.+.+....... .......+++..++.++.||+.||.|||++||+||||||+|||+... ..++.
T Consensus 80 e~~~-~~l~~~~~~~~~~~--------~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~ 150 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASK--------ANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR 150 (317)
T ss_pred eccC-CCHHHHHHhccccc--------ccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCc
Confidence 9995 57877664321100 01122468999999999999999999999999999999999999532 24578
Q ss_pred eeEEecCCCcccCCC----CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChh--------
Q 008127 256 LKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-------- 321 (577)
Q Consensus 256 vkl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-------- 321 (577)
+||+|||+|...... ......+||+.|+|||++.+ .++.++||||+||++|+|++|++||......
T Consensus 151 ~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~ 230 (317)
T cd07868 151 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 230 (317)
T ss_pred EEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCccccccccccc
Confidence 999999999865432 12345689999999998865 3588999999999999999999999653321
Q ss_pred -HHHHHHHhCCC--------------C-------CCC-------------CCCCCCCHHHHHHHHHccccCcCCCCCHHH
Q 008127 322 -GIFKEVLRNKP--------------D-------FRR-------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQ 366 (577)
Q Consensus 322 -~~~~~i~~~~~--------------~-------~~~-------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~ 366 (577)
..+..+..... . +.. ......+.++.+||.+||+.||.+|||+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e 310 (317)
T cd07868 231 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 310 (317)
T ss_pred HHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHH
Confidence 11222211000 0 000 000123457889999999999999999999
Q ss_pred HhcCccc
Q 008127 367 ALSHPWV 373 (577)
Q Consensus 367 il~hp~f 373 (577)
+|+||||
T Consensus 311 ~l~hp~f 317 (317)
T cd07868 311 AMQDPYF 317 (317)
T ss_pred HhcCCCC
Confidence 9999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-43 Score=347.08 Aligned_cols=256 Identities=28% Similarity=0.501 Sum_probs=211.4
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 168 (577)
....|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.++.++.+||||+++++++..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 4567999999999999999999999999999999986543 2345688999999998679999999999875
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
...+|+||||+++|+|.+.+... ....+++..+..++.|++.||.|||+++|+||||||+||++
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~---------------~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili 144 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNT---------------KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL 144 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhc---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE
Confidence 24689999999999999877432 23568999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCC-CCccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||++...... .......|++.|+|||++.+ .++.++|||||||++|+|++|..||.....
T Consensus 145 ~---~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~ 221 (272)
T cd06637 145 T---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP 221 (272)
T ss_pred C---CCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 8 4778999999999765432 22345679999999998752 357789999999999999999999977655
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
......+.... ........++..+.+||.+||..+|.+|||+.+++.||||
T Consensus 222 ~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 222 MRALFLIPRNP--APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HHHHHHHhcCC--CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 44444333321 1222234578899999999999999999999999999998
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=342.91 Aligned_cols=255 Identities=28% Similarity=0.481 Sum_probs=212.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc--hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL--PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~--~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+.|.+.+.||.|+||.||+|.+..+++.||+|.+....... ......+.+|+.+++++ +||||+++++++..++.++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEE
Confidence 35899999999999999999999999999999986543211 12346788999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|+||+++++|.+.+... ..+++..+..++.|++.||.|||+.||+||||+|+||+++ .+
T Consensus 81 ~v~e~~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---~~ 140 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAY-----------------GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---SA 140 (263)
T ss_pred EEEEECCCCcHHHHHHHh-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CC
Confidence 999999999998876432 5688999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCC----ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+.++|+|||++........ .....|+..|+|||++.+. ++.++|||||||++|+|++|+.||...........+.
T Consensus 141 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~ 220 (263)
T cd06625 141 GNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA 220 (263)
T ss_pred CCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHh
Confidence 8899999999876543211 1345688999999988754 5889999999999999999999998766655555544
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
..... ......++..+.++|.+||..+|.+|||+.++++||||
T Consensus 221 ~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 221 TQPTN--PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred ccCCC--CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 33222 12224578899999999999999999999999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-43 Score=358.83 Aligned_cols=267 Identities=24% Similarity=0.299 Sum_probs=204.7
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC-
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD- 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~- 169 (577)
++|++.+.||.|+||.||+|.+. .++..||||++.... .......+.+|+.++..+.+||||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 57999999999999999999752 445789999986432 1234567899999999996799999999988754
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhh---h------------------------------------------HHHh
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTS---A------------------------------------------WFLA 204 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~---~------------------------------------------~~~~ 204 (577)
+.+++|||||++|+|.+++........... . ....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 468999999999999998865311000000 0 0000
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCc
Q 008127 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAY 281 (577)
Q Consensus 205 ~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~ 281 (577)
......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++....... .....+++.
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc---CCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 00124588999999999999999999999999999999999998 478899999999986533221 123356788
Q ss_pred cccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcC
Q 008127 282 YVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 359 (577)
Q Consensus 282 y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~ 359 (577)
|+|||++.+ .++.++|||||||++|||++ |..||.+....+.+...+....... ....+++.+.+|+.+||..||.
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~ 319 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR--APENATPEIYRIMLACWQGDPK 319 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHccCChh
Confidence 999998764 46899999999999999997 9999987655444444443322221 2246788999999999999999
Q ss_pred CCCCHHHHhc
Q 008127 360 ARLTAAQALS 369 (577)
Q Consensus 360 ~Rpt~~~il~ 369 (577)
+|||+.++++
T Consensus 320 ~RPs~~el~~ 329 (338)
T cd05102 320 ERPTFSALVE 329 (338)
T ss_pred hCcCHHHHHH
Confidence 9999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=374.05 Aligned_cols=248 Identities=29% Similarity=0.508 Sum_probs=207.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEE-EEc---C---
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNA-FED---D--- 169 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~-~~~---~--- 169 (577)
+++|.+.|.+|||+.||+|++...|..||+|++.... +...+.+.+||++|+.|++|||||.+++. ... .
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d---e~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVND---EEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCC---HHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 6889999999999999999998888999999886653 56889999999999999999999999993 321 1
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCcEEe
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLF 247 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~NILl 247 (577)
-.++|+||||.||.|.|++... ....|++.+++.|+.|+++|+.+||... |||||||-|||||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~R---------------lq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl 179 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTR---------------LQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL 179 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHH---------------HhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE
Confidence 2588999999999999988654 2355999999999999999999999987 9999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC-Ccc---------ccccCCccccchhcc---cC-CCCCCchhhHHHHHHHHHhCCC
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK-KFQ---------DIVGSAYYVAPEVLK---RK-SGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~-~~~---------~~~gt~~y~aPE~~~---~~-~~~~~DiwSlG~il~el~tg~~ 313 (577)
. .+++.||||||.|.-.-... ... ..-.|+.|+|||++. +. .++|+|||||||+||-|++..+
T Consensus 180 s---~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~ 256 (738)
T KOG1989|consen 180 S---ADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTT 256 (738)
T ss_pred c---CCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCC
Confidence 8 47899999999987432221 111 124799999999874 33 4899999999999999999999
Q ss_pred CCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCc
Q 008127 314 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp 371 (577)
||.+.... .|+.+...++. .+.++..+.+||..||+.||.+||++-+++.+-
T Consensus 257 PFe~sg~l----aIlng~Y~~P~--~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 257 PFEESGKL----AILNGNYSFPP--FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred CcCcCcce----eEEeccccCCC--CccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 99766443 45566555543 467899999999999999999999999988753
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=352.03 Aligned_cols=259 Identities=34% Similarity=0.590 Sum_probs=220.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..+++.||+|.+.............+..|+++++.+. ||||+++++.+......|+||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD-HPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC-CCCchhheeeeecCCEEEEEE
Confidence 6999999999999999999999999999999997765433345667899999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+.+++|.+.+... ....+++..++.++.||+.||.|||+.|++||||||+||+++ .++.+
T Consensus 81 e~~~~~~L~~~~~~~---------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~ 142 (316)
T cd05574 81 DYCPGGELFRLLQRQ---------------PGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH---ESGHI 142 (316)
T ss_pred EecCCCCHHHHHHhC---------------CCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc---CCCCE
Confidence 999999998876432 235689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC------------------------------CccccccCCccccchhcccC-CCCCCchhhHHHHH
Q 008127 257 KATDFGLSDFIKPGK------------------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVIT 305 (577)
Q Consensus 257 kl~DFGla~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il 305 (577)
+|+|||++....... ......||..|+|||++.+. ++.++|||||||++
T Consensus 143 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll 222 (316)
T cd05574 143 MLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILL 222 (316)
T ss_pred EEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHH
Confidence 999999986543211 11234789999999988654 58899999999999
Q ss_pred HHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC----HHHHhcCcccccc
Q 008127 306 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT----AAQALSHPWVREG 376 (577)
Q Consensus 306 ~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt----~~~il~hp~f~~~ 376 (577)
|+|++|..||.+.+....+..+......++. ...++..+.++|.+||..||++||| +.++|.||||+..
T Consensus 223 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 223 YEMLYGTTPFKGSNRDETFSNILKKEVTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred HHHhhCCCCCCCCchHHHHHHHhcCCccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 9999999999888887777777655444332 2237899999999999999999999 9999999999874
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-44 Score=344.61 Aligned_cols=266 Identities=29% Similarity=0.420 Sum_probs=216.6
Q ss_pred ccccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCC-----CeeEEE
Q 008127 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----NVVKFY 163 (577)
Q Consensus 89 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp-----niv~~~ 163 (577)
...+.+..+|.+..++|+|.||+|-.+.+..++..||||+++.- ....+..+-|+++|.++..+. .+|++.
T Consensus 82 ~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~ 157 (415)
T KOG0671|consen 82 QVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMR 157 (415)
T ss_pred EeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence 34566788999999999999999999999999999999988643 245677788999999995332 488899
Q ss_pred EEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCC
Q 008127 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 243 (577)
Q Consensus 164 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~ 243 (577)
++|...++.|||+|.+ |-++++++..+ ...+++..+++.+++|++.++++||+.+++|.||||+
T Consensus 158 ~wFdyrghiCivfell-G~S~~dFlk~N---------------~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPE 221 (415)
T KOG0671|consen 158 DWFDYRGHICIVFELL-GLSTFDFLKEN---------------NYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPE 221 (415)
T ss_pred hhhhccCceEEEEecc-ChhHHHHhccC---------------CccccchHHHHHHHHHHHHHHHHHHhcceeecCCChh
Confidence 9999999999999998 77999987654 4577999999999999999999999999999999999
Q ss_pred cEEeecCC-----------------CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHH
Q 008127 244 NFLFKSAK-----------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVIT 305 (577)
Q Consensus 244 NILl~~~~-----------------~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il 305 (577)
|||+.+.. ++..|+|+|||.|++.. ......+.|..|+|||++.+ +++.++||||+||||
T Consensus 222 NILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~--e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL 299 (415)
T KOG0671|consen 222 NILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDH--EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCIL 299 (415)
T ss_pred eEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceec--cCcceeeeccccCCchheeccCcCCccCceeeeeEE
Confidence 99996421 24679999999998754 34467899999999998766 679999999999999
Q ss_pred HHHHhCCCCCCCCChhH---HHHHHHhCCCCC-------------CCCCCCC-----------------------CC---
Q 008127 306 YILLCGRRPFWDKTEDG---IFKEVLRNKPDF-------------RRKPWPS-----------------------IS--- 343 (577)
Q Consensus 306 ~el~tg~~Pf~~~~~~~---~~~~i~~~~~~~-------------~~~~~~~-----------------------~s--- 343 (577)
+||+||...|+.....+ +++.|+...|.. ....|+. .+
T Consensus 300 ~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~ 379 (415)
T KOG0671|consen 300 VELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEH 379 (415)
T ss_pred EEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHH
Confidence 99999999998776544 334443211100 0011211 01
Q ss_pred HHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 344 ~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
..+.|||++||.+||.+|+|+.|+|.||||+..
T Consensus 380 ~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 380 VQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred hHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 157899999999999999999999999999864
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-43 Score=361.11 Aligned_cols=250 Identities=22% Similarity=0.363 Sum_probs=199.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|++++.||+|+||.||+|.+..++..||+|+..... ...|+.+++++ +||||+++++++...+..++|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~---------~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT---------TLIEAMLLQNV-NHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc---------cHHHHHHHHhC-CCCCCcChhheEEeCCeeEEE
Confidence 36999999999999999999999999999999754332 24689999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+. ++|.+++... ...+++..+..++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 136 ~e~~~-~~l~~~l~~~----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~ 195 (357)
T PHA03209 136 LPHYS-SDLYTYLTKR----------------SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIN---DVDQ 195 (357)
T ss_pred EEccC-CcHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCC
Confidence 99994 6887766432 36789999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh----------HHH
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----------GIF 324 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~----------~~~ 324 (577)
+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|+++..|+...... ..+
T Consensus 196 ~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l 275 (357)
T PHA03209 196 VCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHL 275 (357)
T ss_pred EEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHH
Confidence 99999999986544444456689999999998765 5689999999999999999865554332111 111
Q ss_pred HHHHhCC----CCCC------------------C--------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 325 KEVLRNK----PDFR------------------R--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 325 ~~i~~~~----~~~~------------------~--------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
..++... ..++ . .....++..+.+||.+||+.||.+|||+.++|+||||+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~ 355 (357)
T PHA03209 276 LKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFA 355 (357)
T ss_pred HHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence 1111110 0011 0 00123566788899999999999999999999999998
Q ss_pred c
Q 008127 375 E 375 (577)
Q Consensus 375 ~ 375 (577)
.
T Consensus 356 ~ 356 (357)
T PHA03209 356 Q 356 (357)
T ss_pred c
Confidence 5
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=346.15 Aligned_cols=257 Identities=26% Similarity=0.419 Sum_probs=207.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|++..++..||||.+...... ......+.+|+.+++.+ +||||+++++++..++.+|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE-EGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc-CCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEEE
Confidence 488999999999999999999999999999998654321 22346678999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++ ++|.+++... .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 79 e~~~-~~l~~~~~~~--------------~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~ 140 (285)
T cd07861 79 EFLS-MDLKKYLDSL--------------PKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID---NKGVI 140 (285)
T ss_pred ecCC-CCHHHHHhcC--------------CCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc---CCCcE
Confidence 9997 5787765322 1235689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC-CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 257 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 257 kl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
||+|||++....... ......+++.|+|||++.+. ++.++|||||||++|+|++|++||.+.........+......
T Consensus 141 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
T cd07861 141 KLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGT 220 (285)
T ss_pred EECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999987553222 22344678999999987643 478899999999999999999999876654433332221100
Q ss_pred -------------------------CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 334 -------------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 334 -------------------------~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.....+..+++++.++|.+||+.||.+|||+.+++.||||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 221 PTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred CChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 0011124578899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=362.91 Aligned_cols=253 Identities=23% Similarity=0.367 Sum_probs=203.3
Q ss_pred cccceeeeeeecccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+..+|.+++.||.|+||.||+|... .++..||+|.+.... ...+|+.+++.+ +||||+++++++.....
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l-~h~~iv~~~~~~~~~~~ 160 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTI-SHRAIINLIHAYRWKST 160 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhc-CCCCccceeeeEeeCCE
Confidence 4567999999999999999999754 356789999875432 246899999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||++. ++|.+++. ....+++..++.++.||+.||.|||++|||||||||+|||++
T Consensus 161 ~~lv~e~~~-~~l~~~l~-----------------~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~--- 219 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVD-----------------RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLD--- 219 (392)
T ss_pred EEEEehhcC-CCHHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---
Confidence 999999995 67877662 236789999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh---hHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE---DGIF 324 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~---~~~~ 324 (577)
.++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+... ...+
T Consensus 220 ~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l 299 (392)
T PHA03207 220 EPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQL 299 (392)
T ss_pred CCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHH
Confidence 478899999999976543322 235679999999998875 468899999999999999999999977542 2222
Q ss_pred HHHHhCC----CCCC------------------CCC--C------CCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 325 KEVLRNK----PDFR------------------RKP--W------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 325 ~~i~~~~----~~~~------------------~~~--~------~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
..++... ..++ ... + ..++.++.+||.+||..||++|||+.++|.||||+
T Consensus 300 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~ 379 (392)
T PHA03207 300 RSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT 379 (392)
T ss_pred HHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence 2222210 0000 000 0 12466789999999999999999999999999998
Q ss_pred cc
Q 008127 375 EG 376 (577)
Q Consensus 375 ~~ 376 (577)
..
T Consensus 380 ~~ 381 (392)
T PHA03207 380 KE 381 (392)
T ss_pred cc
Confidence 64
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-44 Score=361.56 Aligned_cols=253 Identities=26% Similarity=0.451 Sum_probs=213.3
Q ss_pred eecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCC
Q 008127 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGG 182 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g 182 (577)
+||+|.||+||.|+|+.|....|||.|.... ....+-+..||.+.++|+ |.|||+++|.+..++++-|.||-+|||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLR-HKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 6999999999999999999999999997543 345677889999999996 999999999999999999999999999
Q ss_pred chhHHHHHHhhhhhhhhhHHHhhhcCCCC--CHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 183 ELLDRILAKMISTTLTSAWFLAIRKDSRY--TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 183 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|.+.|..+ =+++ .+..+..+.+||++||.|||.+.|||||||-+|+|++. -.|.+||+|
T Consensus 658 SLSsLLrsk----------------WGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT--ySGvlKISD 719 (1226)
T KOG4279|consen 658 SLSSLLRSK----------------WGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT--YSGVLKISD 719 (1226)
T ss_pred cHHHHHHhc----------------cCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee--ccceEEecc
Confidence 999877543 2556 78889999999999999999999999999999999986 578999999
Q ss_pred cCCCcccCC-CCCccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhCCCCCC
Q 008127 261 FGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDFR 335 (577)
Q Consensus 261 FGla~~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~~~~~~~~ 335 (577)
||-++.+.. +....++.||..|||||++.. +|+.++|||||||++.||.||++||..... +..+-++ +.....
T Consensus 720 FGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV--GmyKvH 797 (1226)
T KOG4279|consen 720 FGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV--GMYKVH 797 (1226)
T ss_pred cccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh--cceecC
Confidence 999876643 334567899999999999974 569999999999999999999999976433 2222221 222222
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
.+.+..+|.+++.||.+|+.+||.+||+|.++|..||++....+
T Consensus 798 P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk 841 (1226)
T KOG4279|consen 798 PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKK 841 (1226)
T ss_pred CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCC
Confidence 23335678899999999999999999999999999999976433
|
|
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-42 Score=336.45 Aligned_cols=254 Identities=22% Similarity=0.466 Sum_probs=213.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-CCeEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNYVYIA 175 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~~~lv 175 (577)
.|++.+.||.|+||.||++.+..+++.||+|.+..... .....+.+.+|+.+++++ +|||++++++.+.. +..+|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEEEEE
Confidence 48999999999999999999999999999999865432 223456788999999999 59999999998864 5578999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+.+... ....+++.+++.++.|++.||.|||+.||+||||||+||+++ .++.
T Consensus 79 ~e~~~~~~l~~~l~~~---------------~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~---~~~~ 140 (257)
T cd08223 79 MGFCEGGDLYHKLKEQ---------------KGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT---RTNI 140 (257)
T ss_pred ecccCCCcHHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe---cCCc
Confidence 9999999998877532 235689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
++|+|||++....... ......|++.|+|||++.+. ++.++|||||||++|+|++|+.||...+.......+..+...
T Consensus 141 ~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 220 (257)
T cd08223 141 IKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP 220 (257)
T ss_pred EEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC
Confidence 9999999997664322 22345789999999987654 578999999999999999999999877766666666554332
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.....+++.+.+|+.+||..+|.+|||+.++++||||
T Consensus 221 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 221 ---PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred ---CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1224578999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-42 Score=345.66 Aligned_cols=258 Identities=29% Similarity=0.474 Sum_probs=218.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||++.+..+++.||+|.+.............+.+|+.+++.+ +||||+++++.+..++.+|+||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEEEE
Confidence 589999999999999999999999999999998765433334456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++|++|.+.+.. ...+++..+..++.|++.||.|||+.|++||||||+||+++ .++.+
T Consensus 81 e~~~g~~L~~~l~~-----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~---~~~~~ 140 (305)
T cd05609 81 EYVEGGDCATLLKN-----------------IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT---SMGHI 140 (305)
T ss_pred ecCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC---CCCCE
Confidence 99999999887643 25689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC----------------CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 257 KATDFGLSDFIKPGK----------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 257 kl~DFGla~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
||+|||+++...... ......|+..|+|||.+.+ .++.++|||||||++|+|++|..||.+..
T Consensus 141 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~ 220 (305)
T cd05609 141 KLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT 220 (305)
T ss_pred EEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999986421100 0112467889999998754 45889999999999999999999999888
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC---HHHHhcCcccccc
Q 008127 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 376 (577)
Q Consensus 320 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt---~~~il~hp~f~~~ 376 (577)
..+.+..+.......+... ..++.++.++|.+||..+|++||+ +.++|+||||...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 221 PEELFGQVISDDIEWPEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HHHHHHHHHhcccCCCCcc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 8887877776654444332 257899999999999999999998 7999999999763
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-42 Score=343.85 Aligned_cols=258 Identities=27% Similarity=0.484 Sum_probs=215.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..+|++.+.||.|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.+ +||||+++++.+......|+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~~~~l 94 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWV 94 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEE
Confidence 3589999999999999999999999999999999876542 2346688999999998 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++. ...+++.++..++.|++.||.|||+.||+||||||+||+++ .++
T Consensus 95 v~e~~~~~~L~~~~~------------------~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~---~~~ 153 (296)
T cd06654 95 VMEYLAGGSLTDVVT------------------ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDG 153 (296)
T ss_pred eecccCCCCHHHHHH------------------hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCC
Confidence 999999999988663 23578889999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++........ .....|++.|+|||.+.+. ++.++|||||||++|+|++|+.||...........+.....
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~ 233 (296)
T cd06654 154 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 233 (296)
T ss_pred CEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCC
Confidence 899999999876543322 2345789999999988654 58899999999999999999999987766544433333221
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
......+.++..+.++|.+||..+|++|||+.++++||||.....
T Consensus 234 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 234 -PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred -CCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 111122457889999999999999999999999999999987544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=346.70 Aligned_cols=256 Identities=27% Similarity=0.395 Sum_probs=209.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||++.+..+|..+|+|.+.... .......+.+|+++++++ +||||+++++++..++.+|+||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEEe
Confidence 5899999999999999999999999999999886432 233456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||+++++|.+++.. ...+++..+..++.||+.||.|||+ .+++||||||+|||++ .++.
T Consensus 79 ey~~~~~L~~~l~~-----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~ 138 (308)
T cd06615 79 EHMDGGSLDQVLKK-----------------AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGE 138 (308)
T ss_pred eccCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCc
Confidence 99999999887643 2668999999999999999999997 6999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC-
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD- 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~- 333 (577)
+||+|||++...... .....+|++.|+|||++.+. ++.++|||||||++|+|++|+.||...+.......+......
T Consensus 139 ~~l~dfg~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 217 (308)
T cd06615 139 IKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEG 217 (308)
T ss_pred EEEccCCCccccccc-ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccc
Confidence 999999998765432 23456889999999988654 578899999999999999999999765533322211110000
Q ss_pred ---------------------------------CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 334 ---------------------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 334 ---------------------------------~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+..+...++.++.+|+.+||..+|++|||+.++++||||...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 218 EAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred cccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 0011112367889999999999999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=359.85 Aligned_cols=259 Identities=24% Similarity=0.445 Sum_probs=221.8
Q ss_pred cce-eeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc-CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC--e
Q 008127 96 RRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM-ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--Y 171 (577)
Q Consensus 96 ~~y-~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--~ 171 (577)
.+| +...+||+|+|-+||+|.|..+|..||.-.+...+. ..+...+.|..|+.+|+.|+ |||||++|.+|.+.. .
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTDNKT 117 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC-CCceeeeeeheecCCCce
Confidence 445 456789999999999999999999998755543322 23556789999999999995 999999999998754 4
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--CceeccCCCCcEEeec
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKS 249 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~--~iiHrDlKp~NILl~~ 249 (577)
+.+|+|++..|+|..|+.+. +......+..|++||+.||.|||++ .|||||||.+||+|+.
T Consensus 118 in~iTEL~TSGtLr~Y~kk~-----------------~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG 180 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKH-----------------RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG 180 (632)
T ss_pred eeeeeecccCCcHHHHHHHh-----------------ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC
Confidence 88999999999998877544 7888999999999999999999998 5999999999999984
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCC-CChhHHHHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVL 328 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~-~~~~~~~~~i~ 328 (577)
..|.|||+|+|||+...... ....+|||.|||||++...|+..+||||||+.++||+|+..||.. .+..++|+++.
T Consensus 181 --~~G~VKIGDLGLAtl~r~s~-aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~ 257 (632)
T KOG0584|consen 181 --NLGEVKIGDLGLATLLRKSH-AKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVT 257 (632)
T ss_pred --CcCceeecchhHHHHhhccc-cceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHH
Confidence 68999999999999876433 344799999999999999999999999999999999999999965 57788999999
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+..+-...... .+++++||.+||.. ...|||+.++|.||||.....
T Consensus 258 SGiKP~sl~kV~--dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~g 304 (632)
T KOG0584|consen 258 SGIKPAALSKVK--DPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDGG 304 (632)
T ss_pred cCCCHHHhhccC--CHHHHHHHHHHhcC-chhccCHHHHhhChhhccccc
Confidence 887543333222 58999999999999 999999999999999998643
|
|
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=342.14 Aligned_cols=253 Identities=28% Similarity=0.464 Sum_probs=208.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.+.+.||+|+||.||+|++..+++.||+|.+.... ......+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEE
Confidence 47999999999999999999999999999999986543 22345678899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+.+.. ...+++..++.++.|++.||.|||+.||+|+||||+||+++ .++.
T Consensus 85 ~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~ 144 (267)
T cd06645 85 MEFCGGGSLQDIYHV-----------------TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGH 144 (267)
T ss_pred EeccCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCC
Confidence 999999999887643 36789999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
+||+|||++...... .......||+.|+|||++. +.++.++|||||||++|+|++|..||...............
T Consensus 145 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~ 224 (267)
T cd06645 145 VKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS 224 (267)
T ss_pred EEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc
Confidence 999999998755322 1223457999999999873 34678999999999999999999999766554433333222
Q ss_pred CCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 331 KPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 331 ~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
....+. .....++..+.++|.+||..+|++|||+.++++|||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 225 NFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred CCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 211111 111246788999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-42 Score=343.76 Aligned_cols=259 Identities=31% Similarity=0.466 Sum_probs=216.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+.|++++.||.|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.+ +||||+++++.+..++.+|+
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 86 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKLWI 86 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC---HHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeEEE
Confidence 357999999999999999999999999999999986542 34567788999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|...+.+. ...+++..+..++.||+.||.|||+.||+||||||+||+++ .++
T Consensus 87 v~e~~~~~~l~~~~~~~----------------~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~---~~~ 147 (292)
T cd06644 87 MIEFCPGGAVDAIMLEL----------------DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT---LDG 147 (292)
T ss_pred EEecCCCCcHHHHHHhh----------------cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc---CCC
Confidence 99999999987765332 35689999999999999999999999999999999999997 478
Q ss_pred CeeEEecCCCcccCCC-CCccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 255 SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.+||+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|..||...+....+..+
T Consensus 148 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~ 227 (292)
T cd06644 148 DIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI 227 (292)
T ss_pred CEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence 8999999998754322 22345578999999998742 2467899999999999999999999887766666555
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
....... ......++.++.++|.+||..+|++||++.++++||||+...
T Consensus 228 ~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 228 AKSEPPT-LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred hcCCCcc-CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 4433211 112245778999999999999999999999999999997643
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-42 Score=335.30 Aligned_cols=254 Identities=26% Similarity=0.445 Sum_probs=216.8
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||+|+||.||+|.+..+|+.||+|.+...... ......+.+|+.+++.+ +||||+++++++...+.+|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEEEE
Confidence 478899999999999999999999999999998654332 34567789999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++... ....+++..++.++.||+.||.|||+.||+||||||+||+++ .++.+
T Consensus 79 e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~ 140 (256)
T cd08529 79 EYAENGDLHKLLKMQ---------------RGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNV 140 (256)
T ss_pred EeCCCCcHHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCE
Confidence 999999999877532 235788999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++........ .....|++.|+|||++.+. ++.++|||||||++|+|++|+.||...........+..+....
T Consensus 141 ~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd08529 141 KIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP 220 (256)
T ss_pred EEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 9999999887654332 2345789999999988654 5889999999999999999999998887777666666543221
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
. ...++..+.++|.+||+.+|++||++.++++|||+
T Consensus 221 ~---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 221 V---SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred C---ccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 1 12577899999999999999999999999999995
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-42 Score=338.65 Aligned_cols=257 Identities=29% Similarity=0.499 Sum_probs=217.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..++..+|+|++...... .....+.+|+.+++.+ +||||+++++.+...+.+|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEEEE
Confidence 699999999999999999999889999999998765432 2567789999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|++++++|.+.+.... ....+++..++.++.||+.||.|||++||+||||||+||+++ +++.+
T Consensus 79 e~~~~~~l~~~~~~~~--------------~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~---~~~~~ 141 (267)
T cd06610 79 PYLSGGSLLDIMKSSY--------------PRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG---EDGSV 141 (267)
T ss_pred eccCCCcHHHHHHHhc--------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCE
Confidence 9999999998775431 124689999999999999999999999999999999999998 46789
Q ss_pred eEEecCCCcccCCCCCc-----cccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 257 KATDFGLSDFIKPGKKF-----QDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~-----~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
+|+|||++......... ....|+..|+|||++... .+.++|+|||||++|+|++|+.||...+....+..+..
T Consensus 142 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~ 221 (267)
T cd06610 142 KIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQ 221 (267)
T ss_pred EEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhc
Confidence 99999998765443221 345789999999987654 58899999999999999999999988777666666655
Q ss_pred CCCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 330 NKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 330 ~~~~~~~~~--~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
..+...... +..+++.+.+++.+||..||.+|||+.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 222 NDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred CCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 433221111 24678999999999999999999999999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-43 Score=302.78 Aligned_cols=259 Identities=27% Similarity=0.474 Sum_probs=217.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|...++||+|.||+||+|+++.+++.||+|.+....... ..-....+||-+|+.|. |.|||+++++...++.+-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldddde-gvpssalreicllkelk-hknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCC-CCcHHHHHHHHHHHHhh-hcceeehhhhhccCceeEEeH
Confidence 4666788999999999999999999999999987654322 23456789999999996 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||. .+|..++. .-++.+..+.++.++.|+++||.++|++++.||||||.|.|++ .++.+
T Consensus 81 e~cd-qdlkkyfd----------------slng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin---~ngel 140 (292)
T KOG0662|consen 81 EFCD-QDLKKYFD----------------SLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLIN---RNGEL 140 (292)
T ss_pred HHhh-HHHHHHHH----------------hcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEec---cCCcE
Confidence 9994 45655442 2357899999999999999999999999999999999999998 58999
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
||+|||+|+...-. .-+...+-|.+|++|.++.+. |++..|+||-|||+.|+.. |++.|.+.+.++.+..|...-.
T Consensus 141 kladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg 220 (292)
T KOG0662|consen 141 KLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 220 (292)
T ss_pred EecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 99999999876533 345567889999999998763 6889999999999999997 8899999999999988876433
Q ss_pred CCCCCCCCC-------------------------CCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 DFRRKPWPS-------------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~~~~~~~~~-------------------------~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
......||. ++..-+++++++|.-+|.+|++++++++||||.+..
T Consensus 221 ~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 221 TPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred CCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence 333333332 222357999999999999999999999999998743
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-44 Score=331.16 Aligned_cols=267 Identities=28% Similarity=0.413 Sum_probs=209.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCC----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-CCe
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNY 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~ 171 (577)
.|+++..||+|.||.||+|..+.++ +.+|||.+...+-... ......+|+.+++.|+ |||++.+..+|.. +..
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG-iS~SAcREiaL~REl~-h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG-ISMSACREIALLRELK-HPNVISLVKVFLSHDKK 102 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC-cCHHHHHHHHHHHHhc-CCcchhHHHHHhccCce
Confidence 5899999999999999999755543 3689999876533222 2345678999999995 9999999998877 889
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC-
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA- 250 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~- 250 (577)
+++++||.+. +|+..|... ...+...++...+..|++||+.|++|||++.|+||||||.|||+...
T Consensus 103 v~l~fdYAEh-DL~~II~fH------------r~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdg 169 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFH------------RASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDG 169 (438)
T ss_pred EEEEehhhhh-hHHHHHHHh------------ccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccC
Confidence 9999999964 888877644 22334679999999999999999999999999999999999999853
Q ss_pred CCCCCeeEEecCCCcccCCC----CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChh---
Q 008127 251 KEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED--- 321 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~--- 321 (577)
.+.|.|||+|||+|+.+... -....++-|.+|+|||.+.| .|++++||||+|||+.||+|-.+.|.+....
T Consensus 170 perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~ 249 (438)
T KOG0666|consen 170 PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKT 249 (438)
T ss_pred CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhccc
Confidence 34599999999999876532 23456788999999998865 5799999999999999999999999664321
Q ss_pred ------HHHHHHHhCCCCCCCCCCC---------------------------------CCCHHHHHHHHHccccCcCCCC
Q 008127 322 ------GIFKEVLRNKPDFRRKPWP---------------------------------SISNSAKDFVKKLLVKDPRARL 362 (577)
Q Consensus 322 ------~~~~~i~~~~~~~~~~~~~---------------------------------~~s~~~~~li~~~l~~dP~~Rp 362 (577)
+.+..|+.--.......|| .-++...+|+.+||++||.+|+
T Consensus 250 ~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRI 329 (438)
T KOG0666|consen 250 KNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRI 329 (438)
T ss_pred CCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhc
Confidence 2333343311111111222 1344578999999999999999
Q ss_pred CHHHHhcCccccccCC
Q 008127 363 TAAQALSHPWVREGGD 378 (577)
Q Consensus 363 t~~~il~hp~f~~~~~ 378 (577)
|++++|+|+||++..-
T Consensus 330 ta~qAleh~yF~~d~l 345 (438)
T KOG0666|consen 330 TAEQALEHPYFTEDPL 345 (438)
T ss_pred cHHHHhcccccccCCC
Confidence 9999999999998643
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=352.00 Aligned_cols=257 Identities=22% Similarity=0.307 Sum_probs=203.9
Q ss_pred eeeeeccc--CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 100 IGKLLGHG--QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 100 ~~~~lG~G--~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
++++||+| +||+||++.++.+|+.||||++...... ......+.+|+.+++.+ +||||++++++|..++.+|+|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEEEe
Confidence 56789999 7899999999999999999998755332 23456678899999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++|+|.+.+... ....+++..++.++.||+.||.|||+++|+||||||+|||++ .++.++
T Consensus 80 ~~~~~~l~~~~~~~---------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~---~~~~~~ 141 (327)
T cd08227 80 FMAYGSAKDLICTH---------------FMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVY 141 (327)
T ss_pred ccCCCcHHHHHHhh---------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe---cCCcEE
Confidence 99999999877432 124588999999999999999999999999999999999998 467899
Q ss_pred EEecCCCcccCCC-C-------CccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 258 ATDFGLSDFIKPG-K-------KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 258 l~DFGla~~~~~~-~-------~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
++|||.+...... . ......++..|+|||++.+ .++.++|||||||++|+|++|+.||...........
T Consensus 142 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 221 (327)
T cd08227 142 LSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE 221 (327)
T ss_pred EcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHH
Confidence 9999865433211 0 0112357788999999864 368899999999999999999999976554443333
Q ss_pred HHhCCCCCC------------------------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCH
Q 008127 327 VLRNKPDFR------------------------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTA 364 (577)
Q Consensus 327 i~~~~~~~~------------------------------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~ 364 (577)
...+..... ......+++.+.+||.+||+.||++|||+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~ 301 (327)
T cd08227 222 KLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSA 301 (327)
T ss_pred HhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCH
Confidence 322111000 00011356789999999999999999999
Q ss_pred HHHhcCcccccc
Q 008127 365 AQALSHPWVREG 376 (577)
Q Consensus 365 ~~il~hp~f~~~ 376 (577)
.++++||||+..
T Consensus 302 ~ell~~p~f~~~ 313 (327)
T cd08227 302 STLLNHSFFKQI 313 (327)
T ss_pred HHHhcChhhhhc
Confidence 999999999864
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-42 Score=341.56 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=207.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.++||.|+||.||+|.+..+++.||+|.+.... .......+.+|+.++.++ +||||+++++++...+..++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEEEE
Confidence 5888999999999999999999999999999986542 233456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+|||++ .++.+
T Consensus 79 e~~~~~~l~~~---------------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~---~~~~~ 134 (279)
T cd06619 79 EFMDGGSLDVY---------------------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN---TRGQV 134 (279)
T ss_pred ecCCCCChHHh---------------------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC---CCCCE
Confidence 99999988531 3467888999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh-------hHHHHHHH
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE-------DGIFKEVL 328 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-------~~~~~~i~ 328 (577)
||+|||++...... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||..... ......+.
T Consensus 135 ~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 213 (279)
T cd06619 135 KLCDFGVSTQLVNS-IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIV 213 (279)
T ss_pred EEeeCCcceecccc-cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHh
Confidence 99999999765432 2345689999999998865 468899999999999999999999965321 12222222
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.... ........++++.+||.+||+.+|.+||++.++++||||+...
T Consensus 214 ~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 214 DEDP--PVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred ccCC--CCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 2211 1122345788999999999999999999999999999998753
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-42 Score=342.55 Aligned_cols=263 Identities=29% Similarity=0.486 Sum_probs=211.7
Q ss_pred cccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE--
Q 008127 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE-- 167 (577)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-- 167 (577)
......++|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+.+||||+++++++.
T Consensus 12 ~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 12 SFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred cCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 34456678999999999999999999999999999999876432 123567889999999967999999999873
Q ss_pred ---cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCc
Q 008127 168 ---DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 168 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~N 244 (577)
.++.+++||||+++++|.+.+... ......+++..++.++.|++.||.|||+.+|+||||||+|
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n 154 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGF-------------LKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNN 154 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHh-------------hccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHh
Confidence 456799999999999998876432 1233568899999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCCC-CccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCC
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWD 317 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~ 317 (577)
|+++ .++.+||+|||++....... ......|++.|+|||++.. .++.++|||||||++|+|++|+.||..
T Consensus 155 ili~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~ 231 (286)
T cd06638 155 ILLT---TEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLAD 231 (286)
T ss_pred EEEC---CCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCC
Confidence 9998 46789999999987654322 2234579999999998742 357899999999999999999999987
Q ss_pred CChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 318 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 318 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
......+..+...... .......++..+.+||.+||..||.+|||+.++++|+||
T Consensus 232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 232 LHPMRALFKIPRNPPP-TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CchhHHHhhccccCCC-cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 6654444333322111 111112357789999999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-42 Score=343.05 Aligned_cols=257 Identities=33% Similarity=0.510 Sum_probs=216.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++++. ||||+++++.+..+..+|+|
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES---EEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC---HHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEE
Confidence 57999999999999999999998899999999986442 345577889999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++... ...+++..++.++.|++.||.|||+.||+|+||||+||+++ .++.
T Consensus 81 ~e~~~~~~L~~~~~~~----------------~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~---~~~~ 141 (280)
T cd06611 81 IEFCDGGALDSIMLEL----------------ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT---LDGD 141 (280)
T ss_pred eeccCCCcHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC---CCCC
Confidence 9999999998866432 35689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
++|+|||++...... .......||+.|+|||++.. .++.++|||||||++|+|++|+.||.+.........+.
T Consensus 142 ~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 221 (280)
T cd06611 142 VKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKIL 221 (280)
T ss_pred EEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHh
Confidence 999999998765332 22334578999999998742 24678999999999999999999998877666666665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
....... .....++.++.++|.+||+.+|.+||++.++++||||+..
T Consensus 222 ~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 222 KSEPPTL-DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred cCCCCCc-CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 5432211 1224578899999999999999999999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-42 Score=342.47 Aligned_cols=256 Identities=28% Similarity=0.506 Sum_probs=210.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 168 (577)
....|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.++.++.+||||+++++++..
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 4467999999999999999999999999999999886542 2446688999999999779999999999852
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
...+|+||||+++|+|.+.+... ....+++..+..++.||+.||.|||+.||+||||||+||++
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili 154 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNT---------------KGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL 154 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHc---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence 46789999999999998876432 23557888999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCC-CCccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.++|+|||++...... .......|++.|+|||.+. ..++.++|||||||++|+|++|..||.....
T Consensus 155 ~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~ 231 (282)
T cd06636 155 T---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP 231 (282)
T ss_pred C---CCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH
Confidence 8 4778999999998765422 2234567999999999874 2357789999999999999999999977665
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
......+..... .......++.++.+||.+||..||.+|||+.++|+||||
T Consensus 232 ~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 232 MRALFLIPRNPP--PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred HhhhhhHhhCCC--CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 444443333211 112224578999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=343.07 Aligned_cols=241 Identities=17% Similarity=0.234 Sum_probs=204.0
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----CCeEEEEEe
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DNYVYIAME 177 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~~~~lv~e 177 (577)
..||+|++|.||+|.. +|+.||||.+.+.........+.+.+|+.+|+++ +||||+++++++.+ ...+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccCCCceEEEEE
Confidence 4699999999999975 7899999999765443334467788999999999 59999999999876 457899999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCCe
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++|+|.+.+.. ...+++.....++.|++.||.|||+ .+++||||||+|||++ .++.+
T Consensus 103 y~~~g~L~~~l~~-----------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~---~~~~~ 162 (283)
T PHA02988 103 YCTRGYLREVLDK-----------------EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT---ENYKL 162 (283)
T ss_pred eCCCCcHHHHHhh-----------------CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC---CCCcE
Confidence 9999999987743 2568889999999999999999998 5999999999999998 47899
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
||+|||++....... ....||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+..+++..+......
T Consensus 163 kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~ 240 (283)
T PHA02988 163 KIICHGLEKILSSPP--FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNS 240 (283)
T ss_pred EEcccchHhhhcccc--ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC
Confidence 999999998654322 23478999999999864 5689999999999999999999999988888888877665544
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..+ ..+++++.+||.+||+.||.+|||+.++++
T Consensus 241 ~~~~--~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 241 LKLP--LDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred CCCC--CcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 3321 357899999999999999999999999975
|
|
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-42 Score=335.47 Aligned_cols=255 Identities=25% Similarity=0.441 Sum_probs=218.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..+++.+|||.+...... ......+.+|+.+++.+ +||||+++++.+...+.+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEEEE
Confidence 489999999999999999999999999999998765432 33467789999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++... ....+++..+..++.|++.||.|||++||+|+||||+||+++. .+..+
T Consensus 79 e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~ 141 (256)
T cd08220 79 EYAPGGTLAEYIQKR---------------CNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK--HKMVV 141 (256)
T ss_pred ecCCCCCHHHHHHHh---------------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEE
Confidence 999999999877543 2345899999999999999999999999999999999999974 34578
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
||+|||++.............|++.|+|||.+.+. ++.++||||||+++|+|++|..||...+.......+......
T Consensus 142 ~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~-- 219 (256)
T cd08220 142 KIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA-- 219 (256)
T ss_pred EEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC--
Confidence 99999999877554444456789999999988754 578999999999999999999999888777777666654322
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.....+++.+.+++.+||..+|.+|||+.++++||||
T Consensus 220 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 220 -PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred -CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 1223578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-42 Score=341.14 Aligned_cols=257 Identities=31% Similarity=0.478 Sum_probs=215.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++.+.||.|+||.||+|.+..++..+|+|.+.... ......+.+|+.+++.+ +||||+++++++...+..|+|+
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~v~ 81 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWILI 81 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEEEE
Confidence 4788999999999999999999999999999986543 34566788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|...+.. ....+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+
T Consensus 82 e~~~~~~l~~~~~~----------------~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~---~~~~~ 142 (282)
T cd06643 82 EFCAGGAVDAVMLE----------------LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT---LDGDI 142 (282)
T ss_pred EecCCCcHHHHHHh----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---cCCCE
Confidence 99999998776532 235689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
||+|||++...... .......||+.|+|||++.. .++.++|||||||++|+|++|.+||...+..+....+..
T Consensus 143 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~ 222 (282)
T cd06643 143 KLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAK 222 (282)
T ss_pred EEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhh
Confidence 99999998765322 22344578999999998742 246789999999999999999999988776666666654
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
...... .....++.++.+||.+||..||.+|||+.++++||||+...
T Consensus 223 ~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 269 (282)
T cd06643 223 SEPPTL-AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS 269 (282)
T ss_pred cCCCCC-CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence 432211 11235788999999999999999999999999999999753
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=340.63 Aligned_cols=261 Identities=28% Similarity=0.486 Sum_probs=213.8
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC---
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--- 169 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--- 169 (577)
...++|.+.+.||+|+||.||+|.+..+++.+|+|++..... ....+.+|+.+++++.+||||+++++++...
T Consensus 19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD----VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc----HHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence 345789999999999999999999999999999999865421 3456788999999997799999999998643
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
+.+|+||||+++|+|.+.+... ......+++..++.++.|++.||.|||+.+|+||||||+||++
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~-------------~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili 161 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGL-------------LICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL 161 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHh-------------hhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE
Confidence 4689999999999998877432 1134568999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC-CccccccCCccccchhcccC------CCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK------SGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||++....... ......|+..|+|||++... ++.++|||||||++|+|++|+.||.....
T Consensus 162 ~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~ 238 (291)
T cd06639 162 T---TEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP 238 (291)
T ss_pred c---CCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH
Confidence 8 46789999999988654322 22345789999999987532 47899999999999999999999987766
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
...+..+........ .....++..+.+||.+||..+|++||++.++++||||+
T Consensus 239 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 239 VKTLFKIPRNPPPTL-LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHHHHhcCCCCCC-CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 555555544332211 11234677899999999999999999999999999995
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=363.19 Aligned_cols=251 Identities=22% Similarity=0.343 Sum_probs=200.7
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
...|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+++|++| +|||||++++++...+..++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRL-SHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEE
Confidence 3479999999999999999999999999999996422 2356899999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||++. ++|.+++... ...+++..++.++.||+.||.|||++|||||||||+|||++ .++
T Consensus 238 v~e~~~-~~L~~~l~~~----------------~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---~~~ 297 (461)
T PHA03211 238 VLPKYR-SDLYTYLGAR----------------LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---GPE 297 (461)
T ss_pred EEEccC-CCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---CCC
Confidence 999994 6887766432 24689999999999999999999999999999999999998 467
Q ss_pred CeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCC--------hhH
Q 008127 255 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT--------EDG 322 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~--------~~~ 322 (577)
.+||+|||+++....... ....+||+.|+|||++.+. ++.++|||||||++|||++|..|+.... ...
T Consensus 298 ~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~ 377 (461)
T PHA03211 298 DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQ 377 (461)
T ss_pred CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHH
Confidence 899999999986543221 2245799999999988654 5889999999999999999887664322 112
Q ss_pred HHHHHHhCCC---C------------------------CCCCCCC---CCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 323 IFKEVLRNKP---D------------------------FRRKPWP---SISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 323 ~~~~i~~~~~---~------------------------~~~~~~~---~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
+...+..... . +....|. .++..+.+||.+||+.||.+|||+.|+|+|||
T Consensus 378 l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~ 457 (461)
T PHA03211 378 ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL 457 (461)
T ss_pred HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence 2222211110 0 1111122 35668999999999999999999999999999
Q ss_pred ccc
Q 008127 373 VRE 375 (577)
Q Consensus 373 f~~ 375 (577)
|+.
T Consensus 458 f~~ 460 (461)
T PHA03211 458 FQS 460 (461)
T ss_pred cCC
Confidence 974
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-42 Score=338.23 Aligned_cols=252 Identities=32% Similarity=0.529 Sum_probs=210.6
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||.|+||.||+|.+..+|+.||||++.+...........+..|..++....+||||+++++++...+.+|+|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999999999999999987654322223344566666655555799999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
++|.+.+.. ...+++..+..++.||+.||.|||+.+++||||+|+||+++ .++.+||+||
T Consensus 82 ~~L~~~l~~-----------------~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~df 141 (260)
T cd05611 82 GDCASLIKT-----------------LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID---QTGHLKLTDF 141 (260)
T ss_pred CCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEeec
Confidence 999886643 25689999999999999999999999999999999999998 4778999999
Q ss_pred CCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCC
Q 008127 262 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340 (577)
Q Consensus 262 Gla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 340 (577)
|++..... .....|++.|+|||.+.+. ++.++||||||+++|+|++|..||...+....+..+......++.....
T Consensus 142 g~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (260)
T cd05611 142 GLSRNGLE---NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKE 218 (260)
T ss_pred ccceeccc---cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccc
Confidence 99876432 2345688999999987654 4889999999999999999999998888777777776655554444445
Q ss_pred CCCHHHHHHHHHccccCcCCCCC---HHHHhcCcccccc
Q 008127 341 SISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 376 (577)
Q Consensus 341 ~~s~~~~~li~~~l~~dP~~Rpt---~~~il~hp~f~~~ 376 (577)
.+++.+.++|.+||..+|.+||+ +.+++.||||+..
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 68899999999999999999995 5799999999764
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-42 Score=343.15 Aligned_cols=256 Identities=28% Similarity=0.512 Sum_probs=209.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.++.+|+.||+|++...... ....+.+.+|+.+++++. ||||+++++++.....+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PVIKKIALREIRMLKQLK-HPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-ccccHHHHHHHHHHHhCC-CCCEeeeeeEEeeCCEEEEE
Confidence 3699999999999999999999999999999988654321 223456789999999994 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++++.|...+. ....+++..++.++.||+.||.|||++||+||||||+||+++ .++.
T Consensus 79 ~e~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~---~~~~ 138 (286)
T cd07847 79 FEYCDHTVLNELEK-----------------NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT---KQGQ 138 (286)
T ss_pred EeccCccHHHHHHh-----------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc---CCCc
Confidence 99998876655332 235689999999999999999999999999999999999998 4678
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++....... ......++..|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+.....
T Consensus 139 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 218 (286)
T cd07847 139 IKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLG 218 (286)
T ss_pred EEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9999999998765433 3345578899999998764 357899999999999999999999987765554433322100
Q ss_pred C-------------------CCC--------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 D-------------------FRR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 ~-------------------~~~--------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
. .+. ..++.++..+.+||.+||..+|++|||+.+++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 219 DLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred CCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0 000 0124567889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-44 Score=342.13 Aligned_cols=257 Identities=27% Similarity=0.474 Sum_probs=226.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|.++.+||+|+||+|.+|..+.+.+.||||++.+.-.......+--..|-++|.....-|.++++..+|+.-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46889999999999999999999999999999998765544444555566777776555578899999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+.||+|.-++.+. +.+.+..+..++..|+-||-+||++|||+||||.+||||+. .++
T Consensus 429 MEyvnGGDLMyhiQQ~-----------------GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~---eGH 488 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQV-----------------GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS---EGH 488 (683)
T ss_pred EEEecCchhhhHHHHh-----------------cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEecc---CCc
Confidence 9999999998777544 88999999999999999999999999999999999999994 899
Q ss_pred eeEEecCCCcc-cCCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~-~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
|||+|||+++. +..+....++||||.|+|||++. ..|+..+|+||+||+||||+.|++||.+.++++++..|+.....
T Consensus 489 iKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvs 568 (683)
T KOG0696|consen 489 IKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVS 568 (683)
T ss_pred eEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCc
Confidence 99999999975 33455667899999999999875 56788999999999999999999999999999999999998887
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCH-----HHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~-----~~il~hp~f~~~ 376 (577)
++ ..+|.++.++++.+|.+.|.+|... .+|-.||||+..
T Consensus 569 yP----KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 569 YP----KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred Cc----ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence 76 4689999999999999999999843 689999999875
|
|
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=340.72 Aligned_cols=256 Identities=30% Similarity=0.525 Sum_probs=216.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.+. ||||+++++++.++..+|+|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA--EDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc--chHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEEEEE
Confidence 68899999999999999999999999999999865432 234567889999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++. ...+++..++.++.|++.||.|||+.+++||||+|+||+++ .++.+
T Consensus 79 e~~~~~~L~~~~~------------------~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~ 137 (274)
T cd06609 79 EYCGGGSCLDLLK------------------PGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS---EEGDV 137 (274)
T ss_pred EeeCCCcHHHHHh------------------hcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCE
Confidence 9999999988663 13689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++...... .......|++.|+|||.+.+ .++.++|||||||++|+|++|..||...........+.......
T Consensus 138 ~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~ 217 (274)
T cd06609 138 KLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPS 217 (274)
T ss_pred EEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCC
Confidence 99999999876543 23345678999999998765 46889999999999999999999998766655555444432211
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
. ....++..+.+++.+||..+|++|||+.++++||||+....
T Consensus 218 ~--~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 218 L--EGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred C--cccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 1 11227889999999999999999999999999999988654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=346.21 Aligned_cols=255 Identities=27% Similarity=0.512 Sum_probs=205.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|++..+|+.||+|.+..... .......+.+|+.+++++ +||||+++++++.+.+.+|+|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEEEE
Confidence 58999999999999999999999999999999865432 122335677899999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++ ++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+||+++ .++.+
T Consensus 79 e~~~-~~l~~~~~~~----------------~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---~~~~~ 138 (284)
T cd07839 79 EYCD-QDLKKYFDSC----------------NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---KNGEL 138 (284)
T ss_pred ecCC-CCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---CCCcE
Confidence 9996 5777655321 35689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCC-CChhHHHHHHHhCC-
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNK- 331 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~-~~~~~~~~~i~~~~- 331 (577)
||+|||++...... .......+++.|+|||++.+. ++.++|||||||++|+|++|..||.. .+..+.+..+....
T Consensus 139 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 218 (284)
T cd07839 139 KLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 218 (284)
T ss_pred EECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhC
Confidence 99999999765432 223345688999999987653 47899999999999999999888644 34334333332210
Q ss_pred -------------CCCC-----------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 332 -------------PDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 332 -------------~~~~-----------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
+.+. ....+.+++++.+||.+||..||.+|||+.+++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 219 TPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 0000 01123578899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=339.90 Aligned_cols=253 Identities=28% Similarity=0.504 Sum_probs=215.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..+++.||+|.+.+.........+.+.+|+++++++ +||||+++++.+.....+|+|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEEEE
Confidence 489999999999999999999999999999999866544445677899999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++|++|.+++... ..+++..+..++.||+.||.|||++|++|+||+|+||+++ .++.+
T Consensus 80 e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~ 139 (258)
T cd05578 80 DLLLGGDLRYHLSQK-----------------VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHV 139 (258)
T ss_pred eCCCCCCHHHHHHhc-----------------CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc---CCCCE
Confidence 999999998876422 5788999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPD 333 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~--~~~~~~i~~~~~~ 333 (577)
+|+|||++.............|+..|+|||++.+. ++.++|+||||+++|+|++|..||...+. ...+......
T Consensus 140 ~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--- 216 (258)
T cd05578 140 HITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--- 216 (258)
T ss_pred EEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---
Confidence 99999999876554444556789999999988654 58899999999999999999999987663 2233233221
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCH--HHHhcCccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTA--AQALSHPWV 373 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~--~~il~hp~f 373 (577)
......+.++..+.++|.+||..||.+||++ .++++||||
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 217 ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 1112224578999999999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-44 Score=353.94 Aligned_cols=237 Identities=27% Similarity=0.404 Sum_probs=202.5
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
++-||.|+.|.||+|+ ..++.||||++..- -..+|.-|++|. ||||+.+.++|.....+|||||||+
T Consensus 129 LeWlGSGaQGAVF~Gr--l~netVAVKKV~el----------kETdIKHLRkLk-H~NII~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGR--LHNETVAVKKVREL----------KETDIKHLRKLK-HPNIITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhccCcccceeeee--ccCceehhHHHhhh----------hhhhHHHHHhcc-CcceeeEeeeecCCceeEEeeeccc
Confidence 4459999999999996 55789999987432 235777889995 9999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
.|-|.+.|.. ...++......|..+|+.|++|||.+.|||||||.-||||+ .+..|||+|
T Consensus 196 ~GqL~~VLka-----------------~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsD 255 (904)
T KOG4721|consen 196 QGQLYEVLKA-----------------GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISD 255 (904)
T ss_pred cccHHHHHhc-----------------cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEecc
Confidence 9999987754 37788999999999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCCCccccccCCccccchhcccCC-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 261 FGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
||-++........-.++||..|||||++...+ +.|+||||||||||||+||..||.+-....++.-+=.+...+ +..
T Consensus 256 FGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~L--pvP 333 (904)
T KOG4721|consen 256 FGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHL--PVP 333 (904)
T ss_pred ccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccc--cCc
Confidence 99998876655556789999999999999877 899999999999999999999997766555443333332222 223
Q ss_pred CCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
..++..++-||+.||...|..||++.++|.|-=
T Consensus 334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 568889999999999999999999999999843
|
|
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-42 Score=344.15 Aligned_cols=260 Identities=28% Similarity=0.487 Sum_probs=215.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
...+|.+.+.||.|+||.||+|.+..+|+.||+|.+..... ...+.+.+|+.+++.+ +||||+++++++...+.+|
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~ 92 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELW 92 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCEEE
Confidence 34689999999999999999999999999999999865432 2346688999999998 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+++++|.+++. ...+++..+..++.|++.||.|||+.||+||||||+|||++ .+
T Consensus 93 lv~e~~~~~~L~~~~~------------------~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~---~~ 151 (297)
T cd06656 93 VVMEYLAGGSLTDVVT------------------ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG---MD 151 (297)
T ss_pred EeecccCCCCHHHHHH------------------hCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CC
Confidence 9999999999988663 24578889999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+.++|+|||++........ .....|++.|+|||.+.+. ++.++|||||||++|+|++|..||.+.+.......+....
T Consensus 152 ~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~ 231 (297)
T cd06656 152 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG 231 (297)
T ss_pred CCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCC
Confidence 8899999999876543322 2345789999999988654 5789999999999999999999997765543333222221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
.. .......++..+.+|+.+||..+|.+||++.++++||||+.....
T Consensus 232 ~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (297)
T cd06656 232 TP-ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPL 278 (297)
T ss_pred CC-CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccccc
Confidence 11 111224577889999999999999999999999999999876543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=333.15 Aligned_cols=254 Identities=28% Similarity=0.481 Sum_probs=219.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||.+++..+++.+|+|.+...... ......+.+|+.+++++ +||||+++++++.+.+.+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEEEE
Confidence 589999999999999999999999999999998655432 34566788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|||++++|.+.+... ....+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.+
T Consensus 79 e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~ 140 (256)
T cd08221 79 EYANGGTLYDKIVRQ---------------KGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLI 140 (256)
T ss_pred EecCCCcHHHHHHhc---------------cccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCE
Confidence 999999999877432 235689999999999999999999999999999999999998 47789
Q ss_pred eEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||++....... ......|++.|+|||++.+ .++.++|||||||++|+|++|..||......+....+..+....
T Consensus 141 kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd08221 141 KLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP 220 (256)
T ss_pred EECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 999999997664333 2345678999999998765 45788999999999999999999998888888777777654332
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
. .+.++.++.++|.+||..+|.+|||+.++++|||+
T Consensus 221 ~---~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 221 V---VSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred C---ccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 2 24578999999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-42 Score=341.00 Aligned_cols=254 Identities=30% Similarity=0.452 Sum_probs=208.2
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||.|+||.||+|.+..+|+.||+|.+.+...........+.+|+.+++.+. ||||+++++++...+.+|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 699999999999999999999999987654332334556678999999995 9999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+++... ....+++..++.++.|++.||.|||+.|++||||+|+||+++ .++.+||+|||+
T Consensus 80 L~~~l~~~---------------~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~---~~~~~~l~dfg~ 141 (277)
T cd05577 80 LKYHIYNV---------------GEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD---DHGNVRISDLGL 141 (277)
T ss_pred HHHHHHHc---------------CcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEccCcc
Confidence 98877543 224689999999999999999999999999999999999998 478899999999
Q ss_pred CcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008127 264 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 342 (577)
Q Consensus 264 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 342 (577)
+.............++..|+|||++.+ .++.++|||||||++|+|++|+.||...........+............+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (277)
T cd05577 142 AVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKF 221 (277)
T ss_pred hhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccC
Confidence 877654444445678899999998764 4578999999999999999999999765442222222222222222233457
Q ss_pred CHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 343 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 343 s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
++.+.++|.+||..||.+|| ++.+++.||||+..
T Consensus 222 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 222 SPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred CHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence 89999999999999999999 99999999999764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=352.73 Aligned_cols=259 Identities=29% Similarity=0.487 Sum_probs=224.7
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
-|..++.||-|+||+|.+++...|...||+|.+.+...........+..|.+||..- +.++||+||-.|.+.+.+|+||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEEE
Confidence 588899999999999999998889999999999998887778888999999999987 7999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
+|++||++...|.+. +-|.|..++.++.++.+|+++.|..|+|||||||+||||+ .+|+|
T Consensus 709 dYIPGGDmMSLLIrm-----------------gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILID---rdGHI 768 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRM-----------------GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHI 768 (1034)
T ss_pred eccCCccHHHHHHHh-----------------ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEc---cCCce
Confidence 999999999988655 6789999999999999999999999999999999999999 58999
Q ss_pred eEEecCCCccc---------CCCCC----------------------------------ccccccCCccccchhcc-cCC
Q 008127 257 KATDFGLSDFI---------KPGKK----------------------------------FQDIVGSAYYVAPEVLK-RKS 292 (577)
Q Consensus 257 kl~DFGla~~~---------~~~~~----------------------------------~~~~~gt~~y~aPE~~~-~~~ 292 (577)
||+||||+.-+ ..+.. ....+||+.|+|||++. ..+
T Consensus 769 KLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~ 848 (1034)
T KOG0608|consen 769 KLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGY 848 (1034)
T ss_pred eeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCc
Confidence 99999998532 11100 01247999999999876 467
Q ss_pred CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC---CHHHHhc
Q 008127 293 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALS 369 (577)
Q Consensus 293 ~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp---t~~~il~ 369 (577)
+.-||+||.|||||||+.|++||.+.++.+...+++.....+.......+|+++.++|.++.+ +++.|. .++++..
T Consensus 849 ~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKa 927 (1034)
T KOG0608|consen 849 TQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKA 927 (1034)
T ss_pred cccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhhhcccchhhhhc
Confidence 889999999999999999999999988887777776655444444456799999999999876 699998 4778999
Q ss_pred CccccccC
Q 008127 370 HPWVREGG 377 (577)
Q Consensus 370 hp~f~~~~ 377 (577)
||||+...
T Consensus 928 HpfFkgID 935 (1034)
T KOG0608|consen 928 HPFFKGID 935 (1034)
T ss_pred Cccccccc
Confidence 99999753
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-42 Score=339.38 Aligned_cols=254 Identities=27% Similarity=0.436 Sum_probs=207.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..+|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEE
Confidence 3579999999999999999999999999999999865421 2345678999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+.+.. ...+++..+..++.|++.||.|||+.||+||||||+||+++ .++
T Consensus 84 v~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~---~~~ 143 (267)
T cd06646 84 CMEYCGGGSLQDIYHV-----------------TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT---DNG 143 (267)
T ss_pred EEeCCCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCC
Confidence 9999999999887643 25689999999999999999999999999999999999997 477
Q ss_pred CeeEEecCCCcccCCCC-CccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 255 SLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
.+||+|||++....... ......|++.|+|||.+. ..++.++|||||||++|+|++|..||...........+..
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~ 223 (267)
T cd06646 144 DVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK 223 (267)
T ss_pred CEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec
Confidence 89999999998654322 223457899999999874 2347789999999999999999999966544332222222
Q ss_pred CCCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 330 NKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 330 ~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
.....+. .....++..+.+||.+||..+|++|||++++|+|+|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 224 SNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred CCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 1111111 111346789999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-42 Score=336.55 Aligned_cols=250 Identities=31% Similarity=0.545 Sum_probs=212.8
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||.|+||.||+|++..+++.||+|++.+.........+.+.+|+.+++.+ +||||+++++.+.++..+|+|+||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 79999999999999999999999999766544344567899999999999 59999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+.+... ..+++..+..++.||+.||.|||+++++|+||+|+||+++ .++.++|+|||+
T Consensus 80 L~~~l~~~-----------------~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~~~~~l~df~~ 139 (262)
T cd05572 80 LWTILRDR-----------------GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGF 139 (262)
T ss_pred HHHHHhhc-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CCCCEEEeeCCc
Confidence 98877432 5589999999999999999999999999999999999998 478899999999
Q ss_pred CcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCC--hhHHHHHHHhCCCCCCCCCCC
Q 008127 264 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT--EDGIFKEVLRNKPDFRRKPWP 340 (577)
Q Consensus 264 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~--~~~~~~~i~~~~~~~~~~~~~ 340 (577)
+.............|++.|+|||.+.+ .++.++|+||||+++|+|++|..||.... ....+..+......... ..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 217 (262)
T cd05572 140 AKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEF--PN 217 (262)
T ss_pred ccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCC--Cc
Confidence 987755433345678999999998764 45889999999999999999999998776 55666666642222221 13
Q ss_pred CCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 341 SISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 341 ~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
..++++.++|.+||..+|.+||+ +.++++||||++.
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 35789999999999999999999 9999999999864
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=339.40 Aligned_cols=260 Identities=25% Similarity=0.335 Sum_probs=208.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.+..+|+.||||++...... .....+..|+.++.+..+||||+++++++..++.+|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS--QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc--HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 689999999999999999999999999999998764321 233456667776555557999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||++ |+|.+.+... ......+++..++.++.||+.||.|||++ +++||||||+||+++ .++.
T Consensus 80 e~~~-~~l~~~l~~~-------------~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~---~~~~ 142 (283)
T cd06617 80 EVMD-TSLDKFYKKV-------------YDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN---RNGQ 142 (283)
T ss_pred hhhc-ccHHHHHHHh-------------ccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCC
Confidence 9996 6777665432 12335789999999999999999999997 999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc-----CCCCCCchhhHHHHHHHHHhCCCCCCCC-ChhHHHHHHHh
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLR 329 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwSlG~il~el~tg~~Pf~~~-~~~~~~~~i~~ 329 (577)
+||+|||++.............|+..|+|||++.+ .++.++|+|||||++|+|++|+.||... ...+.+..+..
T Consensus 143 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 222 (283)
T cd06617 143 VKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE 222 (283)
T ss_pred EEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh
Confidence 99999999987644333334578999999998753 3478899999999999999999999653 22333444443
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
... ...+...+|.++.++|.+||..+|.+|||+.++++||||....
T Consensus 223 ~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 223 EPS--PQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred cCC--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 221 1111234789999999999999999999999999999999754
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-42 Score=339.89 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=199.7
Q ss_pred eecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHh--cCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL--AGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l--~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||++.+..+|+.||+|.+.+.............+|..+++.+ .+||||+.+++++..++.+++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999998765433222233344555444433 269999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++.. ...+++..+..++.|++.||.|||+.+|+||||||+|||++ .++.++|+|
T Consensus 81 ~~~L~~~i~~-----------------~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~---~~~~~~l~d 140 (279)
T cd05633 81 GGDLHYHLSQ-----------------HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISD 140 (279)
T ss_pred CCCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC---CCCCEEEcc
Confidence 9999876643 25689999999999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChh--HHHHHHHhCCCCCCC
Q 008127 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRR 336 (577)
Q Consensus 261 FGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~--~~~~~i~~~~~~~~~ 336 (577)
||++....... .....||+.|+|||.+.. .++.++||||+||++|+|++|..||...... ....... .....
T Consensus 141 fg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~ 216 (279)
T cd05633 141 LGLACDFSKKK-PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT---LTVNV 216 (279)
T ss_pred CCcceeccccC-ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh---hcCCc
Confidence 99987554322 234579999999998753 3588999999999999999999999754321 1121111 11222
Q ss_pred CCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCccccccC
Q 008127 337 KPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG 377 (577)
Q Consensus 337 ~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~~ 377 (577)
...+.+++++.++|.+||..||.+|| |+.++++||||+...
T Consensus 217 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 217 ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 23356789999999999999999999 699999999998754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=342.97 Aligned_cols=262 Identities=28% Similarity=0.393 Sum_probs=213.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++++.||+|+||.||+|.+..+|..||+|.+.... .......+.+|+.+++++ +||||+++++.+...+.+|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEEEE
Confidence 6899999999999999999999999999999886432 233457788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||+++++|..++... .....+++..+..++.||+.||.|||+ .+|+||||||+||+++. ++.
T Consensus 79 e~~~~~~l~~~~~~~--------------~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~---~~~ 141 (286)
T cd06622 79 EYMDAGSLDKLYAGG--------------VATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG---NGQ 141 (286)
T ss_pred eecCCCCHHHHHHhc--------------cccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC---CCC
Confidence 999999997765321 012478999999999999999999997 59999999999999984 788
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-------CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||++...... ......|++.|+|||.+.+. ++.++|||||||++|+|++|..||...........+.
T Consensus 142 ~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~ 220 (286)
T cd06622 142 VKLCDFGVSGNLVAS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLS 220 (286)
T ss_pred EEEeecCCcccccCC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHH
Confidence 999999998765422 22345788999999987532 3678999999999999999999997665544443322
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
......+...++.++.++.+||.+||..+|.+||++.+++.||||......
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 221 AIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred HHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 211111222234588999999999999999999999999999999876543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=341.41 Aligned_cols=256 Identities=30% Similarity=0.521 Sum_probs=216.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++.+.||.|+||.||+|.+..+|+.||+|.+..... ...+.+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKEL-KNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhc-CCCceeeeeeeEecCceEEEE
Confidence 479999999999999999999999999999999865432 2356788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||+++++|.+.+. ...+++.++..++.|++.||.|||+.|++||||||+||+++ .++.
T Consensus 95 ~e~~~~~~L~~~~~------------------~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~---~~~~ 153 (296)
T cd06655 95 MEYLAGGSLTDVVT------------------ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG---MDGS 153 (296)
T ss_pred EEecCCCcHHHHHH------------------hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCC
Confidence 99999999987652 24578999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||++........ .....|++.|+|||.+.+. ++.++|||||||++|+|++|+.||.+.........+......
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T cd06655 154 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP 233 (296)
T ss_pred EEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc
Confidence 99999999876543322 2345789999999987654 688999999999999999999999887765555444433221
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
....+..+++.+.+||.+||..||.+|||+.+++.||||+...
T Consensus 234 -~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 234 -ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred -ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 1122346789999999999999999999999999999998654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=342.08 Aligned_cols=262 Identities=26% Similarity=0.408 Sum_probs=209.7
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe-----
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY----- 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~----- 171 (577)
+|++.+.||.|+||.||+|.+..+|+.||||.+..... .......+.+|+.+++.+.+||||+++++++.....
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 69999999999999999999999999999998765422 112335678899999999778999999999886655
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.|+||||+++ +|.+++.... ......+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~------------~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~-- 145 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNG------------RGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK-- 145 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhc------------ccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec--
Confidence 8999999975 7888765331 011356899999999999999999999999999999999999983
Q ss_pred CCCCeeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
.++.+||+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+.
T Consensus 146 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~ 225 (295)
T cd07837 146 QKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIF 225 (295)
T ss_pred CCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 3678999999998765322 22233467889999998754 35889999999999999999999998877666555443
Q ss_pred hCCCCCC------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 329 RNKPDFR------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 329 ~~~~~~~------------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
....... ....+.+++++.+||.+||.+||.+|||+.+++.||||+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 226 KLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 3211000 001245788999999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=335.96 Aligned_cols=253 Identities=30% Similarity=0.514 Sum_probs=210.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc------hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL------PIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~------~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
+|.+.+.||.|+||.||+|.+..+++.||+|.+....... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCC
Confidence 4778899999999999999999899999999886543221 12346788999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||++|++||||+|+||+++
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~-- 140 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNN-----------------YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD-- 140 (267)
T ss_pred ccEEEEEecCCCCHHHHHHh-----------------ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc--
Confidence 99999999999999887643 25688899999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCC-------CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 251 KEDSSLKATDFGLSDFIKPGK-------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
.++.+||+|||++....... ......|+..|+|||.+.+ .++.++|||||||++|+|++|..||.+.+...
T Consensus 141 -~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 219 (267)
T cd06628 141 -NKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ 219 (267)
T ss_pred -CCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH
Confidence 47889999999987664211 1123468899999998765 45788999999999999999999998766555
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
....+..... ......++..+.++|.+||+.||.+||++.++++||||
T Consensus 220 ~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 220 AIFKIGENAS---PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred HHHHHhccCC---CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 4444433211 12224578999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-42 Score=341.43 Aligned_cols=256 Identities=32% Similarity=0.521 Sum_probs=212.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..+|..||+|++...... ......+.+|+.+++++. ||||+++++++.....+|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEe
Confidence 489999999999999999999999999999998765421 234567899999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+ +++|.+.+... ...+++..++.++.||+.||.|||+.||+|+||||+||+++. ++.+
T Consensus 79 e~~-~~~L~~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~---~~~~ 138 (286)
T cd07832 79 EYM-PSDLSEVLRDE----------------ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA---DGVL 138 (286)
T ss_pred ccc-CCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC---CCcE
Confidence 999 99998876432 256899999999999999999999999999999999999984 7889
Q ss_pred eEEecCCCcccCCCC--CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+|+|||++....... ......|+..|+|||++.+. ++.++||||+||++|+|++|.+||.+......+..++....
T Consensus 139 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T cd07832 139 KIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLG 218 (286)
T ss_pred EEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcC
Confidence 999999998765432 23455789999999987543 47899999999999999999888877766555554443111
Q ss_pred C-------------------CCC-------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 333 D-------------------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 333 ~-------------------~~~-------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
. ++. ..++..+.++.+||.+||..+|.+|||+.++|+||||.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 219 TPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 0 000 01235678899999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=333.00 Aligned_cols=254 Identities=25% Similarity=0.532 Sum_probs=216.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||++.+..+|+.||+|.+...... ......+.+|+.+++.+ +||||+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEEEE
Confidence 589999999999999999999999999999998754332 23456789999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+... ....+++..++.++.|++.||.|||++|++|+||+|+||+++ .++.+
T Consensus 79 e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~---~~~~~ 140 (256)
T cd08218 79 DYCEGGDLYKKINAQ---------------RGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTI 140 (256)
T ss_pred ecCCCCcHHHHHHhc---------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCE
Confidence 999999998877432 234678999999999999999999999999999999999998 47789
Q ss_pred eEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++........ .....|++.|+|||++.+. .+.++|+|||||++|+|++|+.||......+....++.+....
T Consensus 141 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd08218 141 KLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPP 220 (256)
T ss_pred EEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCC
Confidence 9999999976543322 2234688999999987654 5789999999999999999999998888777777776654321
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
....++.++.++|.+||+.+|.+||++.++++||||
T Consensus 221 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 221 ---VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ---CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 124578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=318.43 Aligned_cols=254 Identities=24% Similarity=0.374 Sum_probs=206.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----C
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-----D 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-----~ 169 (577)
++||++.+.||+|||+.||++....++..||+|++.... ....+...+|++..+++ +|||+++++++... .
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhccCc
Confidence 358999999999999999999999999999999997765 34678899999999999 59999999887543 3
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCcEEe
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLF 247 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~NILl 247 (577)
...||++.|+..|+|.+.+... ..++..+++.++..|+.+|++||++||+.. ++||||||.|||+
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~-------------k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl 162 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERL-------------KIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL 162 (302)
T ss_pred eeEEEEeehhccccHHHHHHHH-------------hhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe
Confidence 4699999999999999988644 234568999999999999999999999998 9999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCC----CC---cc---ccccCCccccchhcccC----CCCCCchhhHHHHHHHHHhCCC
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPG----KK---FQ---DIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~----~~---~~---~~~gt~~y~aPE~~~~~----~~~~~DiwSlG~il~el~tg~~ 313 (577)
+ +.+.++|+|||.++...-. .. .+ ....|..|+|||.+.-+ .++++|||||||+||.|+.|..
T Consensus 163 s---~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~s 239 (302)
T KOG2345|consen 163 S---DSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGES 239 (302)
T ss_pred c---CCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCC
Confidence 8 4789999999998764311 11 11 23578999999998743 3789999999999999999999
Q ss_pred CCCCCCh--hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 314 PFWDKTE--DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 314 Pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
||...-. ..+...+..+...+++.. .+|+.+.+||+.||+.||.+||++.+++.+
T Consensus 240 Pfe~~~~~GgSlaLAv~n~q~s~P~~~--~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 240 PFERIYQQGGSLALAVQNAQISIPNSS--RYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred cchHHhhcCCeEEEeeeccccccCCCC--CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 9932111 111122333344444432 388999999999999999999999999864
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=339.33 Aligned_cols=253 Identities=29% Similarity=0.468 Sum_probs=206.2
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEEEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVYIA 175 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~lv 175 (577)
|++.+.||+|+||.||+|.+..+++.||+|.+...... .......+|+.++.++.+||||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS--LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCC--chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 67889999999999999999999999999988654221 12233457899999997799999999999987 899999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++ |+|.+.+... ...+++..++.++.||+.||.|||+.|++||||||+||+++ . +.
T Consensus 79 ~e~~~-~~l~~~l~~~----------------~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~ 137 (282)
T cd07831 79 FELMD-MNLYELIKGR----------------KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DI 137 (282)
T ss_pred EecCC-ccHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CC
Confidence 99996 5887766432 25689999999999999999999999999999999999998 3 88
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC-
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP- 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~- 332 (577)
+||+|||++.............+++.|+|||++. +.++.++|||||||++|+|++|..||.+.+..+....+.....
T Consensus 138 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~ 217 (282)
T cd07831 138 LKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGT 217 (282)
T ss_pred eEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCC
Confidence 9999999998765544445567899999999764 2358899999999999999999999988776555444332110
Q ss_pred -----------------CCCCC-------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 -----------------DFRRK-------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 -----------------~~~~~-------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.++.. ..+.++.++.+||.+||.++|.+|||+.++++||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 218 PDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred CCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 00000 013567899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-42 Score=346.14 Aligned_cols=258 Identities=27% Similarity=0.420 Sum_probs=193.4
Q ss_pred eeeecccCCeEEEEEEEcC--CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE--cCCeEEEEE
Q 008127 101 GKLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE--DDNYVYIAM 176 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~--~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~--~~~~~~lv~ 176 (577)
+.+||+|+||.||+|+++. ++..||+|.+.... ....+.+|+.+++.+ +||||+++++++. .+..+|+||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLREL-KHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCeEEEEE
Confidence 3579999999999998653 66899999886543 224577899999999 5999999999885 456789999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC-CCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~-~~~~~ 255 (577)
||++ ++|.+.+....... .......+++..++.++.||+.||.|||+.||+||||||+|||+... ..++.
T Consensus 80 e~~~-~~l~~~~~~~~~~~--------~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~ 150 (317)
T cd07867 80 DYAE-HDLWHIIKFHRASK--------ANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR 150 (317)
T ss_pred eeeC-CcHHHHHHhhhccc--------cCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCc
Confidence 9996 57877664321100 01122458899999999999999999999999999999999999532 24678
Q ss_pred eeEEecCCCcccCCCC----CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChh--------
Q 008127 256 LKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-------- 321 (577)
Q Consensus 256 vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-------- 321 (577)
+||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|+||++||......
T Consensus 151 ~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~ 230 (317)
T cd07867 151 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFH 230 (317)
T ss_pred EEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccccccccccccc
Confidence 9999999998664322 2335678999999998865 3588999999999999999999999654321
Q ss_pred -HHHHHHHhC--------------CCCCCC--------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHH
Q 008127 322 -GIFKEVLRN--------------KPDFRR--------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQ 366 (577)
Q Consensus 322 -~~~~~i~~~--------------~~~~~~--------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~ 366 (577)
..+..+... .+.++. ......+..+.+||.+||+.||.+|||+.|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e 310 (317)
T cd07867 231 HDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQ 310 (317)
T ss_pred HHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHH
Confidence 111111110 000000 000123456889999999999999999999
Q ss_pred HhcCccc
Q 008127 367 ALSHPWV 373 (577)
Q Consensus 367 il~hp~f 373 (577)
+|+||||
T Consensus 311 ~l~hp~f 317 (317)
T cd07867 311 ALQDPYF 317 (317)
T ss_pred HhcCCCC
Confidence 9999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=338.95 Aligned_cols=256 Identities=26% Similarity=0.463 Sum_probs=214.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|++.+.||.|+||.||+|.+..++..||||.+..... ......+.+|+.+++.+ +||||+++++++.+++.+|+|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEE
Confidence 468889999999999999999999999999999875432 23467789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++||+|.+++. ...+++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.
T Consensus 81 ~e~~~~~~L~~~i~------------------~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~---~~~~ 139 (277)
T cd06640 81 MEYLGGGSALDLLR------------------AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGD 139 (277)
T ss_pred EecCCCCcHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc---CCCC
Confidence 99999999988663 24578889999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
++|+|||++........ .....++..|+|||++.+. .+.++|+|||||++|+|++|..||...........+....+
T Consensus 140 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~- 218 (277)
T cd06640 140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP- 218 (277)
T ss_pred EEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCC-
Confidence 99999999976543322 2334688899999987654 58899999999999999999999987776655544433221
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
......++..+.+++.+||..+|.+||++.++++||||.....
T Consensus 219 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 219 --PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred --CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 1222356788999999999999999999999999999987654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=336.69 Aligned_cols=259 Identities=30% Similarity=0.519 Sum_probs=212.8
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 170 (577)
..++|++.+.||.|+||.||+|.++.+++.||+|++.... .....+.+|+.+++++.+||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 3468999999999999999999999899999999987553 244678999999999977999999999997544
Q ss_pred ---eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 171 ---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
.+|+||||+++++|.+.+... ......+++..++.++.|++.||.|||+.+++|+||+|+||++
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~-------------~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~ 146 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGL-------------RKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL 146 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHH-------------hhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE
Confidence 589999999999998876432 1124678999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC-CccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||++....... ......|++.|+|||++.. .++.++|||||||++|+|++|..||.....
T Consensus 147 ~---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 223 (275)
T cd06608 147 T---KNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP 223 (275)
T ss_pred c---cCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch
Confidence 8 47889999999987654322 2234578999999998753 246789999999999999999999987665
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
......+........ .....++..+.+||.+||..||.+|||+.++++|||+
T Consensus 224 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 224 MRALFKIPRNPPPTL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HHHHHHhhccCCCCC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 555555554332211 1112367899999999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=343.52 Aligned_cols=260 Identities=26% Similarity=0.412 Sum_probs=210.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~ 173 (577)
.+|++.+.||.|+||.||+|.+..+|+.||+|.+....... .....+.+|+.+++++. ||||+++++++... +.++
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLR-HPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCC-CCCCcceEEEEecCCCCeEE
Confidence 47999999999999999999999999999999986543211 12234568999999994 99999999998754 5789
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+. ++|.+.+... ...+++..++.++.||+.||.|||+.|++||||||+||+++ .+
T Consensus 85 lv~e~~~-~~l~~~l~~~----------------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~ 144 (309)
T cd07845 85 LVMEYCE-QDLASLLDNM----------------PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT---DK 144 (309)
T ss_pred EEEecCC-CCHHHHHHhc----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CC
Confidence 9999996 4777655321 25689999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 254 SSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
+.+||+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+...
T Consensus 145 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~ 224 (309)
T cd07845 145 GCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQL 224 (309)
T ss_pred CCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 88999999999876533 22233456888999998764 3588999999999999999999999988877777666542
Q ss_pred CCCCCC-------------------CC-------CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 331 KPDFRR-------------------KP-------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 331 ~~~~~~-------------------~~-------~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
...... .. ...+++.+.+||.+||..||++|||+.+++.||||+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 225 LGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred cCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 111000 00 123578899999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=335.68 Aligned_cols=248 Identities=25% Similarity=0.423 Sum_probs=198.0
Q ss_pred ceeeeeee--cccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 97 RYTIGKLL--GHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 97 ~y~~~~~l--G~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.|.+.+.+ |.|+||.||++.++.++..+|+|.+...... . .|+.+...+.+||||++++++|..++.+|+
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~------~--~e~~~~~~~~~h~~iv~~~~~~~~~~~~~i 86 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN------A--IEPMVHQLMKDNPNFIKLYYSVTTLKGHVL 86 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc------h--hhHHHHHHhhcCCCEEEEEEEEecCCeeEE
Confidence 46666655 9999999999999999999999998654321 1 133333334479999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++... ..+++..++.++.||+.||.|||+.|++||||||+||+++. ++
T Consensus 87 v~e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~---~~ 146 (267)
T PHA03390 87 IMDYIKDGDLFDLLKKE-----------------GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR---AK 146 (267)
T ss_pred EEEcCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC---CC
Confidence 99999999999877432 47899999999999999999999999999999999999984 44
Q ss_pred -CeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 -SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 -~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.++|+|||++...... ....|+..|+|||++.+ .++.++|||||||++|+|++|..||.................
T Consensus 147 ~~~~l~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 223 (267)
T PHA03390 147 DRIYLCDYGLCKIIGTP---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ 223 (267)
T ss_pred CeEEEecCccceecCCC---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh
Confidence 8999999998765432 23468999999998865 458889999999999999999999976544332211111111
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCC-HHHHhcCccccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT-AAQALSHPWVRE 375 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-~~~il~hp~f~~ 375 (577)
......++.+++.+.+||.+||+.+|.+||+ ++++|+||||+.
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 224 QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 2222333568899999999999999999996 599999999973
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=352.15 Aligned_cols=267 Identities=24% Similarity=0.278 Sum_probs=208.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC-----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++.+.||+|+||.||+|++..+| ..||||++..... ......+.+|+.+++.+.+||||++++++|...+
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 47999999999999999999865444 5799999865432 2345678899999999966999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhh----------------------------------------------------
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLT---------------------------------------------------- 198 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~---------------------------------------------------- 198 (577)
.+|+|||||++|+|.+++..........
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 9999999999999999986542110000
Q ss_pred -hhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCc---c
Q 008127 199 -SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---Q 274 (577)
Q Consensus 199 -~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~---~ 274 (577)
...........++++..++.++.||+.||.|||++||+||||||+|||++ +++.+||+|||+++........ .
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcceeecc
Confidence 00000011224588999999999999999999999999999999999998 4788999999999765432221 1
Q ss_pred ccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHH
Q 008127 275 DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 352 (577)
Q Consensus 275 ~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ 352 (577)
...+++.|+|||++. +.++.++|||||||++|+|++ |+.||........+..+......... ...+++++.+++.+
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~ 350 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSR--PDFAPPEIYSIMKM 350 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccC--CCCCCHHHHHHHHH
Confidence 234567899999875 456899999999999999997 99999876655555555444322222 23468999999999
Q ss_pred ccccCcCCCCCHHHHhc
Q 008127 353 LLVKDPRARLTAAQALS 369 (577)
Q Consensus 353 ~l~~dP~~Rpt~~~il~ 369 (577)
||..||.+|||+.++++
T Consensus 351 cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 351 CWNLEPTERPTFSQISQ 367 (374)
T ss_pred HcCCChhhCcCHHHHHH
Confidence 99999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=333.73 Aligned_cols=254 Identities=28% Similarity=0.449 Sum_probs=208.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc---CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM---ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+|++.+.||.|+||.||+|.+ .+|+.+|||.+..... ........+.+|+++++.+ +||||+++++++.+.+.++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEE
Confidence 478889999999999999986 5788999998864321 1223456789999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|+||+++++|.+++... ..+++..+..++.|++.||.|||+.+|+|+||+|+||+++ .+
T Consensus 79 lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~ 138 (265)
T cd06631 79 IFMEFVPGGSISSILNRF-----------------GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---PN 138 (265)
T ss_pred EEEecCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC---CC
Confidence 999999999998877432 5688999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCC-------CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 254 SSLKATDFGLSDFIKP-------GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~-------~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+.++|+|||++..... ........|+..|+|||++.+. ++.++|||||||++|+|++|..||...+......
T Consensus 139 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~ 218 (265)
T cd06631 139 GIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF 218 (265)
T ss_pred CeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHH
Confidence 8899999999875421 1112345789999999988654 5789999999999999999999998766554444
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+....... ......++.++.++|.+||..+|.+|||+.++++||||
T Consensus 219 ~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 219 YIGAHRGLM-PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HhhhccCCC-CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 443322111 12234578999999999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=334.68 Aligned_cols=256 Identities=28% Similarity=0.498 Sum_probs=210.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC-------chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-------LPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-------~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+...... .....+.+.+|+.+++.+ +||||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccC
Confidence 588999999999999999999989999999987542111 111345688999999999 599999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+.+++||||+++++|.+.+... ..+++..+..++.||+.||.|||+++++||||+|+||+++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~- 142 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTY-----------------GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD- 142 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhc-----------------cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc-
Confidence 9999999999999998876432 5688999999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCC---CccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHhCCCCCCCCChhHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~ 323 (577)
.++.++|+|||++....... ......|+..|+|||++... ++.++|+||||+++|+|++|..||......+.
T Consensus 143 --~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~ 220 (272)
T cd06629 143 --ADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA 220 (272)
T ss_pred --CCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH
Confidence 47899999999987643211 12345688999999987642 58899999999999999999999976655544
Q ss_pred HHHHHhCC--CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 324 FKEVLRNK--PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 324 ~~~i~~~~--~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
...+.... ..++....+.++..+.++|.+||..+|.+|||+.++|+||||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 221 MFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 44433222 222223335678999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=333.10 Aligned_cols=252 Identities=29% Similarity=0.515 Sum_probs=211.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..+++.||+|.+.... ..+.+.+|+++++.+ +||||+++++++.....+|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEE
Confidence 57999999999999999999999889999999986542 267899999999999 699999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||+++++|.+.+... ...+++..++.++.|++.||.|||+.+|+||||+|+||+++ .++.
T Consensus 77 ~e~~~~~~L~~~l~~~----------------~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---~~~~ 137 (256)
T cd06612 77 MEYCGAGSVSDIMKIT----------------NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQ 137 (256)
T ss_pred EecCCCCcHHHHHHhC----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---CCCc
Confidence 9999999998876422 35689999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||++....... ......|+..|+|||++.+. ++.++|||||||++|+|++|+.||...........+......
T Consensus 138 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 217 (256)
T cd06612 138 AKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPP 217 (256)
T ss_pred EEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCC
Confidence 9999999998765433 22345688999999988654 578999999999999999999999876655444333322211
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.....+.++..+.++|.+||..||.+|||+.++|.||||
T Consensus 218 -~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 218 -TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred -CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 111123467899999999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=332.52 Aligned_cols=254 Identities=28% Similarity=0.489 Sum_probs=206.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~ 172 (577)
.|++.+.||+|+||.||+|.+..++..||+|.+..... ........+.+|+.+++++ +||||+++++++.. ...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCEE
Confidence 58899999999999999999999999999998865432 1123456788999999999 59999999998875 4678
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++++||+++++|.+.+... ..+++..++.++.||+.||.|||+++|+||||||+||+++ .
T Consensus 82 ~l~~e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~---~ 141 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY-----------------GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD---S 141 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---C
Confidence 9999999999998877432 5688999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCC----CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
++.+||+|||++...... .......++..|+|||.+.+. ++.++|||||||++|+|++|+.||...........+
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~ 221 (266)
T cd06651 142 AGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKI 221 (266)
T ss_pred CCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHH
Confidence 778999999998765321 112235688999999988654 588999999999999999999999876554444443
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
...... ......+++.+.+++ +||..+|++||++.++++||||+
T Consensus 222 ~~~~~~--~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 222 ATQPTN--PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred hcCCCC--CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 332211 111234678889999 57778999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=331.95 Aligned_cols=254 Identities=30% Similarity=0.491 Sum_probs=212.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..+++.+|+|.+..... .....+.+|+.+++++ +||||+++++++...+.+|++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEEEE
Confidence 579999999999999999999999999999999875532 2567889999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++... ...+++..++.++.|++.||.|||+++|+|+||||+||+++ .++.
T Consensus 79 ~e~~~~~~l~~~~~~~----------------~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~ 139 (262)
T cd06613 79 MEYCGGGSLQDIYQVT----------------RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---EDGD 139 (262)
T ss_pred EeCCCCCcHHHHHHhh----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---CCCC
Confidence 9999999998866432 25689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
+||+|||++....... ......++..|+|||.+.+ .++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 140 ~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~ 219 (262)
T cd06613 140 VKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKS 219 (262)
T ss_pred EEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 9999999987654322 2345678999999998764 3578899999999999999999999887665554444433
Q ss_pred CCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 331 KPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 331 ~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
...... .....++.++.+||.+||..+|..|||+.+++.|||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 220 NFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred cCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 211111 112345778999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=334.88 Aligned_cols=258 Identities=23% Similarity=0.397 Sum_probs=208.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc---hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~---~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+|+..+.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.+++++. ||||+++++++.+.+.++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HPHIIRMLGATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC-CCceehhhceeccCCeEE
Confidence 3788899999999999999999999999999986543211 224577899999999995 999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|+||+++++|.+.+... ..+++..++.++.||+.||.|||++|++||||||+||+++. .+
T Consensus 80 ~v~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~--~~ 140 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKY-----------------GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS--TG 140 (268)
T ss_pred EEEeccCCCcHHHHHHHh-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CC
Confidence 999999999998876432 56889999999999999999999999999999999999974 33
Q ss_pred CCeeEEecCCCcccCCCCC-----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
..+||+|||++........ .....||..|+|||.+.+ .++.++|||||||++|+|++|..||...........+
T Consensus 141 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 220 (268)
T cd06630 141 QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALI 220 (268)
T ss_pred CEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHH
Confidence 4699999999876643211 123468899999998765 4588999999999999999999999654433222222
Q ss_pred HhCCC-CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 328 LRNKP-DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 328 ~~~~~-~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
..... .......+.+++++.+++.+||..+|.+|||+.++++||||+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 221 FKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 21111 111122235788999999999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=341.02 Aligned_cols=261 Identities=30% Similarity=0.442 Sum_probs=212.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC--chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
+|.+.+.||.|+||.||+|.+..+|+.||||.+...... .......+..|+.+++.+. ||||+++++++.+.+.+++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCEEEE
Confidence 488899999999999999999999999999998765432 1223455778999999995 9999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+ +|+|.+.+... ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++
T Consensus 80 v~e~~-~~~L~~~i~~~----------------~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~---~~~ 139 (298)
T cd07841 80 VFEFM-ETDLEKVIKDK----------------SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA---SDG 139 (298)
T ss_pred EEccc-CCCHHHHHhcc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc---CCC
Confidence 99999 88998876422 13689999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 255 SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
.+||+|||++...... .......+++.|+|||.+.+ .++.++|||||||++|+|++|.+||.+....+.+..+....
T Consensus 140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~ 219 (298)
T cd07841 140 VLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEAL 219 (298)
T ss_pred CEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHc
Confidence 8999999999876543 22334467889999998754 35788999999999999999988887766555554443211
Q ss_pred CCCC------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 332 PDFR------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 332 ~~~~------------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.... ...+..++..+.+||.+||..+|.+|||+.+++.||||++...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~ 290 (298)
T cd07841 220 GTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA 290 (298)
T ss_pred CCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence 0000 0012345778999999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=340.51 Aligned_cols=256 Identities=27% Similarity=0.476 Sum_probs=209.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..+++.||+|.+...... ....+.+.+|+++++.+ +||||+++++++..++..|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD-KMVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc-chhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEEE
Confidence 3699999999999999999999989999999988654332 23456688999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++++.|.+... ....+++..++.++.||+.||.|||+.||+||||+|+||+++ .++.
T Consensus 79 ~e~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~---~~~~ 138 (286)
T cd07846 79 FEFVDHTVLDDLEK-----------------YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS---QSGV 138 (286)
T ss_pred EecCCccHHHHHHh-----------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCc
Confidence 99999887765332 224589999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
++|+|||++...... .......++..|+|||++.+ .++.++|||||||++|+|++|++||......+....+.....
T Consensus 139 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T cd07846 139 VKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLG 218 (286)
T ss_pred EEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhC
Confidence 999999998765433 22344678999999998764 347889999999999999999999977665444333332100
Q ss_pred CC-------------------C--------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 DF-------------------R--------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 ~~-------------------~--------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+ + ...++.++..+.+|+.+||..+|.+||++.++++||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 219 NLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred CCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 00 0 01134678899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=351.42 Aligned_cols=268 Identities=24% Similarity=0.300 Sum_probs=207.4
Q ss_pred cceeeeeeecccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++.+.||+|+||.||+|++ ..++..||||++..... ....+.+.+|+.++..+.+||||+++++++...+
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 4799999999999999999974 34567899999864432 2345678899999999966999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhh--------h--------------------------------------------
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTL--------T-------------------------------------------- 198 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~--------~-------------------------------------------- 198 (577)
..++|||||++|+|.+++......... .
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 999999999999999998653210000 0
Q ss_pred ------hhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC
Q 008127 199 ------SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272 (577)
Q Consensus 199 ------~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~ 272 (577)
............+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++........
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEecCccceeccCccc
Confidence 00000111234688999999999999999999999999999999999998 467899999999986543322
Q ss_pred c---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008127 273 F---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 347 (577)
Q Consensus 273 ~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 347 (577)
. ....++..|+|||++.+ .++.++|||||||++|+|++ |..||............+....... .....+.++.
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ 347 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRML--SPECAPSEMY 347 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCC--CCCCCCHHHH
Confidence 1 12345667999998765 46889999999999999998 8999987665544444444332211 1234678999
Q ss_pred HHHHHccccCcCCCCCHHHHhcC
Q 008127 348 DFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 348 ~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+||.+||..||++|||+.++++.
T Consensus 348 ~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 348 DIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHccCChhHCcCHHHHHHH
Confidence 99999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=341.50 Aligned_cols=261 Identities=31% Similarity=0.553 Sum_probs=215.8
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+.|.....||.|+||.||++.+..++..||||.+.... ....+.+.+|+.+++.+ +||||+++++.+...+..|+
T Consensus 21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~l 96 (292)
T cd06658 21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDY-HHENVVDMYNSYLVGDELWV 96 (292)
T ss_pred HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhC-CCCcHHHHHHheecCCeEEE
Confidence 345666778999999999999999999999999986542 23456788999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+.+. ...+++..++.++.||+.||.|||++||+||||||+||+++ .++
T Consensus 97 v~e~~~~~~L~~~~~------------------~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~ 155 (292)
T cd06658 97 VMEFLEGGALTDIVT------------------HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT---SDG 155 (292)
T ss_pred EEeCCCCCcHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCC
Confidence 999999999977552 24588999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCC-CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++...... .......|++.|+|||.+.+ .++.++|||||||++|+|++|..||........+..+.....
T Consensus 156 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~ 235 (292)
T cd06658 156 RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLP 235 (292)
T ss_pred CEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC
Confidence 8999999998754322 22234578999999998865 458899999999999999999999988776665555443222
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~ 381 (577)
.. ......++..+.+++.+||..||.+|||+.++++||||+.....+.
T Consensus 236 ~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~ 283 (292)
T cd06658 236 PR-VKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSC 283 (292)
T ss_pred Cc-cccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCccc
Confidence 11 1112346889999999999999999999999999999998766553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=339.41 Aligned_cols=263 Identities=23% Similarity=0.317 Sum_probs=209.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|...+.||+|+||.||++.+..+|+.||||.+..... ......+.+|+.++.++.+||||+++++++..++..+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 46677889999999999999999999999999876532 2345678899999999966999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||+. ++|.+..... .......+++..+..++.|++.||+|||+ .+|+||||||+||+++ .++.
T Consensus 83 e~~~-~~l~~l~~~~------------~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~ 146 (288)
T cd06616 83 ELMD-ISLDKFYKYV------------YEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD---RNGN 146 (288)
T ss_pred eccc-CCHHHHHHHH------------HHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc---cCCc
Confidence 9985 4554433211 11234678999999999999999999997 4999999999999998 4678
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC----CCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~~~ 330 (577)
+||+|||++.............|++.|+|||++.+. ++.++|||||||++|+|++|+.||..... .+....+...
T Consensus 147 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 226 (288)
T cd06616 147 IKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKG 226 (288)
T ss_pred EEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCC
Confidence 999999999765543333445789999999988654 68899999999999999999999965542 1222233222
Q ss_pred C-CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 331 K-PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 331 ~-~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
. +......+..++.++.+||.+||..+|.+|||+.+++.||||+...
T Consensus 227 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 227 DPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred CCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 2 2222222345789999999999999999999999999999998643
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=338.86 Aligned_cols=256 Identities=28% Similarity=0.470 Sum_probs=207.7
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++++.||.|+||.||+|++..+|+.||||.+..... .......+.+|+++++++ +||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEEe
Confidence 38899999999999999999999999999998865432 122345688999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+. ++|.+++... ....+++..++.++.||+.||.|||+.+++||||+|+||+++ .++.+
T Consensus 79 e~~~-~~l~~~~~~~---------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~---~~~~~ 139 (284)
T cd07860 79 EFLH-QDLKKFMDAS---------------PLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAI 139 (284)
T ss_pred eccc-cCHHHHHHhC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCE
Confidence 9995 5787765322 345689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC-CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 257 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 257 kl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
||+|||++....... ......+++.|+|||++.+. ++.++|||||||++|+|+||+.||.+.+.......+......
T Consensus 140 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 219 (284)
T cd07860 140 KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 219 (284)
T ss_pred EEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999987654322 22344678899999987653 377899999999999999999999877655444433321110
Q ss_pred ------------------CCC-------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 334 ------------------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 334 ------------------~~~-------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
++. ...+.+++++.++|.+||+.||.+|||+.++++||||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 220 PDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 000 0123477889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=337.59 Aligned_cols=262 Identities=26% Similarity=0.442 Sum_probs=211.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.++.+|+.||+|.+...... ......+.+|+.+++++ +||||+++++++.....+|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEEE
Confidence 3699999999999999999999999999999988654321 22345678899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++ ++|.+.+... ....+++..++.++.||+.||.|||+++++||||+|+||+++. .++.
T Consensus 80 ~e~~~-~~l~~~~~~~---------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~ 141 (294)
T PLN00009 80 FEYLD-LDLKKHMDSS---------------PDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNA 141 (294)
T ss_pred Eeccc-ccHHHHHHhC---------------CCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCE
Confidence 99995 5777765322 2234678889999999999999999999999999999999984 3567
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|..||...+..+.+.++.....
T Consensus 142 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~ 221 (294)
T PLN00009 142 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILG 221 (294)
T ss_pred EEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 999999999765322 22334578899999998765 357899999999999999999999987766555554432111
Q ss_pred CC---------------------CC----CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 DF---------------------RR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~~---------------------~~----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.. .. ...+.+++++.++|.+||+.+|++||++.++++||||++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 222 TPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred CCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 00 00 01245788999999999999999999999999999998754
|
|
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-41 Score=330.19 Aligned_cols=255 Identities=27% Similarity=0.501 Sum_probs=207.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~ 171 (577)
.+|++.+.||+|+||.||+|.+..+|..||||.+..... ........+.+|+.+++++ .||||+++++++.+ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERT 80 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCce
Confidence 368999999999999999999999999999998754321 1223456789999999999 59999999998876 357
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+|+|+||||+||+++
T Consensus 81 ~~~v~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~--- 140 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKSY-----------------GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD--- 140 (265)
T ss_pred EEEEEEecCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec---
Confidence 88999999999998876432 5578899999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCC----CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
.++.++|+|||++...... .......|+..|+|||++.+ ..+.++|||||||++|+|++|+.||...........
T Consensus 141 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 220 (265)
T cd06652 141 SVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK 220 (265)
T ss_pred CCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH
Confidence 4788999999998765321 12234568999999998764 458899999999999999999999977655554444
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
+...... ....+.++..+.++|.+||. +|++||++.++++|||+.
T Consensus 221 ~~~~~~~--~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 221 IATQPTN--PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred HhcCCCC--CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 4332211 11224567889999999995 899999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-41 Score=329.71 Aligned_cols=254 Identities=33% Similarity=0.552 Sum_probs=211.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+.+++.+ +||||+++++.+...+.+++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEEE
Confidence 589999999999999999999889999999998765432 34678899999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+.. ...+++..+..++.|++.||.|||+.||+|+||+|+||+++ .++.+
T Consensus 79 e~~~~~~L~~~~~~-----------------~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~ 138 (264)
T cd06626 79 EYCSGGTLEELLEH-----------------GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVI 138 (264)
T ss_pred ecCCCCcHHHHHhh-----------------cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCE
Confidence 99999999887642 25578899999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCC-----ccccccCCccccchhcccC----CCCCCchhhHHHHHHHHHhCCCCCCCCChh-HHHHH
Q 008127 257 KATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKE 326 (577)
Q Consensus 257 kl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~----~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~ 326 (577)
||+|||++........ .....+++.|+|||++.+. .+.++||||||+++|+|++|..||...... .....
T Consensus 139 kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~ 218 (264)
T cd06626 139 KLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFH 218 (264)
T ss_pred EEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHH
Confidence 9999999877643322 2235788999999988643 478899999999999999999999765332 22222
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
+.. ......+.+..+++.+.++|.+||+.+|.+|||+.+++.|||+
T Consensus 219 ~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 219 VGA-GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred Hhc-CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 322 2222223334568899999999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=346.15 Aligned_cols=261 Identities=30% Similarity=0.490 Sum_probs=207.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++.+.||+|+||.||+|.+..+|+.||||.+.... .......+.+|+.+++.+. ||||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 79 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFES 79 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCC-CCCcCchhheeecccccc
Confidence 4468999999999999999999999999999999986422 1234566788999999995 99999999887643
Q ss_pred -CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 -NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...|+|+||++ ++|.+.+ ....+++..++.++.||+.||.|||+.||+||||||+|||++
T Consensus 80 ~~~~~lv~e~~~-~~l~~~~------------------~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~ 140 (336)
T cd07849 80 FNDVYIVQELME-TDLYKLI------------------KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 140 (336)
T ss_pred cceEEEEehhcc-cCHHHHH------------------hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC
Confidence 35899999996 4776544 235689999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
.++.+||+|||++........ .....||+.|+|||.+.+ .++.++|||||||++|+|++|+.||.+.....
T Consensus 141 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~ 217 (336)
T cd07849 141 ---TNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH 217 (336)
T ss_pred ---CCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 478899999999876543221 234578999999998643 46889999999999999999999997765433
Q ss_pred HHHHHHh-----------------------CCCCCCCC----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 323 IFKEVLR-----------------------NKPDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 323 ~~~~i~~-----------------------~~~~~~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
....+.. ..+..... ..+.+++++.+||.+||+.+|.+|||+.++++||||+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~ 297 (336)
T cd07849 218 QLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ 297 (336)
T ss_pred HHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence 3222211 00000000 12456788999999999999999999999999999998
Q ss_pred cCCC
Q 008127 376 GGDA 379 (577)
Q Consensus 376 ~~~~ 379 (577)
....
T Consensus 298 ~~~~ 301 (336)
T cd07849 298 YHDP 301 (336)
T ss_pred cCCC
Confidence 7643
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=333.80 Aligned_cols=250 Identities=24% Similarity=0.380 Sum_probs=199.9
Q ss_pred eecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHh--cCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL--AGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l--~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||+|.+..+++.||+|.+.+...........+..|..+++.+ .+||+|+.+++++...+.+|+||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999998765432222222334444433332 269999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
||+|.+++.. ...+++..++.++.|++.||.|||+.+|+||||||+||+++ .++.+||+|
T Consensus 81 g~~L~~~l~~-----------------~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~---~~~~~kl~d 140 (278)
T cd05606 81 GGDLHYHLSQ-----------------HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISD 140 (278)
T ss_pred CCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC---CCCCEEEcc
Confidence 9999876532 35789999999999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCC---hhHHHHHHHhCCCCCC
Q 008127 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPDFR 335 (577)
Q Consensus 261 FGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~---~~~~~~~i~~~~~~~~ 335 (577)
||++...... .....+|+..|+|||++.+ .++.++||||+||++|+|++|+.||.+.. .......+.....
T Consensus 141 fg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--- 216 (278)
T cd05606 141 LGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV--- 216 (278)
T ss_pred CcCccccCcc-CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCC---
Confidence 9998765432 2234579999999999864 36889999999999999999999997652 2222222222222
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCccccccC
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG 377 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~~ 377 (577)
..+..+++.+.+++.+||..+|.+|| ++.++++||||+...
T Consensus 217 -~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 217 -ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred -CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 22245689999999999999999999 999999999998754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=340.14 Aligned_cols=256 Identities=29% Similarity=0.451 Sum_probs=208.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~ 173 (577)
+.|++.+.||.|+||.||+|.+..+++.||+|.+...... ......+.+|+.+++++. ||||+++++++... +.+|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCcEE
Confidence 3689999999999999999999999999999998755432 223345678999999995 99999999998877 8999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||++ ++|.+.+... ...+++..++.++.||+.||.|||+.|++||||||+||+++ .+
T Consensus 83 lv~e~~~-~~L~~~~~~~----------------~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~ 142 (293)
T cd07843 83 MVMEYVE-HDLKSLMETM----------------KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN---NR 142 (293)
T ss_pred EEehhcC-cCHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CC
Confidence 9999997 4887765432 24689999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 254 SSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
+.+||+|||++...... .......+++.|+|||.+.+. .+.++|||||||++|+|++|..||........+..+...
T Consensus 143 ~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 222 (293)
T cd07843 143 GILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKL 222 (293)
T ss_pred CcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 89999999999866543 233445688999999988653 478999999999999999999999887766555554331
Q ss_pred CCCC--------------------------CCCCCCC--CCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 331 KPDF--------------------------RRKPWPS--ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 331 ~~~~--------------------------~~~~~~~--~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.... ....++. +++.+.++|.+||+.+|++|||+.++|.||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 223 LGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 1100 0011222 47889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=337.91 Aligned_cols=258 Identities=27% Similarity=0.455 Sum_probs=214.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
...+|.+.+.||.|+||.||+|.+..+|+.||+|.+.............+.+|+.+++.+ +||||+++++++...+..|
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTAW 91 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeEE
Confidence 445799999999999999999999999999999998654433344556788999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||++ |+|.+.+.. ....+++..+..++.||+.||.|||+.||+||||+|+||+++ .+
T Consensus 92 lv~e~~~-g~l~~~~~~----------------~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~---~~ 151 (307)
T cd06607 92 LVMEYCL-GSASDILEV----------------HKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT---EP 151 (307)
T ss_pred EEHHhhC-CCHHHHHHH----------------cccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC---CC
Confidence 9999996 567665432 135689999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
+.+||+|||++...... ....|++.|+|||++. +.++.++||||||+++|+|++|..||.+.........+..
T Consensus 152 ~~~kL~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~ 228 (307)
T cd06607 152 GTVKLADFGSASLVSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228 (307)
T ss_pred CCEEEeecCcceecCCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc
Confidence 88999999998765433 3457889999999874 3467899999999999999999999988776665554443
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.... ......++..+.++|.+||..+|.+||++.+++.||||....
T Consensus 229 ~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 229 NDSP--TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred CCCC--CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 3221 111234678899999999999999999999999999998754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=336.64 Aligned_cols=255 Identities=27% Similarity=0.450 Sum_probs=202.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.++.+++.||||.+...... .....+.+|+.+++.+ +||||+++++++...+..|+|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEEEE
Confidence 4799999999999999999999999999999998654321 1223467899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++ +|.+.+... ...+++..++.++.||+.||.|||+++|+||||||+||+++ .++.
T Consensus 82 ~e~~~~-~L~~~~~~~----------------~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~---~~~~ 141 (291)
T cd07844 82 FEYLDT-DLKQYMDDC----------------GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS---ERGE 141 (291)
T ss_pred EecCCC-CHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc---CCCC
Confidence 999974 888766432 24688999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCC-hhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~-~~~~~~~i~~~~ 331 (577)
+||+|||++...... .......++..|+|||++.+ .++.++||||+||++|+|++|+.||.+.. ..+....+....
T Consensus 142 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~ 221 (291)
T cd07844 142 LKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVL 221 (291)
T ss_pred EEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhc
Confidence 999999998754321 12233457889999998764 35788999999999999999999997654 222222221100
Q ss_pred CC--------------CC------------CCCCCCCC--HHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 332 PD--------------FR------------RKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 332 ~~--------------~~------------~~~~~~~s--~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.. +. ...++.++ ..+.++|.+||+.+|.+|||+.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 222 GTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred CCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00 00 00112344 788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=349.30 Aligned_cols=258 Identities=28% Similarity=0.478 Sum_probs=232.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+++++..||-|+||.|-++........+|+|++++.........+.+..|.+||...+ .|.||++|..|.+..++|++
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhh
Confidence 35778889999999999999866555569999999888877778899999999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||-|-||+|+..|.. ++.|.+..++.++..+++|++|||++|||+|||||+|.+|+ .+|-
T Consensus 499 mEaClGGElWTiLrd-----------------Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd---~~Gy 558 (732)
T KOG0614|consen 499 MEACLGGELWTILRD-----------------RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLD---NRGY 558 (732)
T ss_pred HHhhcCchhhhhhhh-----------------cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeec---cCCc
Confidence 999999999987754 48899999999999999999999999999999999999998 5899
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||.|||+|+.+..+....++||||.|.|||++.. ....++|.||||+++|||++|.+||.+.++...+..|+++.-.+
T Consensus 559 ~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i 638 (732)
T KOG0614|consen 559 LKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI 638 (732)
T ss_pred eEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh
Confidence 99999999999999999999999999999997654 45889999999999999999999999999999999999976443
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
..+ ..++..+.+||+++...+|.+|.. +.+|.+|.||...
T Consensus 639 ~~P--r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 639 EFP--RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred hcc--cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 332 358889999999999999999995 8899999999763
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=328.47 Aligned_cols=250 Identities=28% Similarity=0.507 Sum_probs=211.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||++.+..+++.||+|.+..... ....+.+.+|+.+++.+ +||||+++++.+...+.+|+||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEE
Confidence 48899999999999999999999999999999865432 23567788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+... ....+++..++.++.||+.||.|||++||+|+||||+||+++ .++.+
T Consensus 78 e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~---~~~~~ 139 (255)
T cd08219 78 EYCDGGDLMQKIKLQ---------------RGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT---QNGKV 139 (255)
T ss_pred eeCCCCcHHHHHHhc---------------cCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC---CCCcE
Confidence 999999998876432 235688999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++....... ......|++.|+|||++.+. ++.++|+||||+++|+|++|..||...+.......+..+....
T Consensus 140 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 219 (255)
T cd08219 140 KLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP 219 (255)
T ss_pred EEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC
Confidence 999999997654322 22346789999999998654 5889999999999999999999998877766666665543322
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
....++..+.+||.+||..||.+|||+.+++.-
T Consensus 220 ---~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 ---LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 124578899999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=328.09 Aligned_cols=256 Identities=28% Similarity=0.503 Sum_probs=215.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~l 174 (577)
+|++.+.||.|+||.||+|.+..+|..||+|.+..... .....+.+..|+.+++.+ +||||+++++++.. ...+|+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhc-CCCccceeeeeeecCCCCEEEE
Confidence 48899999999999999999999999999999865443 234567788999999999 49999999998753 457899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH-----hcCceeccCCCCcEEeec
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH-----LHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH-----~~~iiHrDlKp~NILl~~ 249 (577)
+|||+++++|.+.+... ......+++..++.++.||+.||.||| +.+++|+||||+||+++
T Consensus 79 ~~e~~~~~~L~~~l~~~-------------~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~- 144 (265)
T cd08217 79 VMEYCEGGDLAQLIQKC-------------KKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD- 144 (265)
T ss_pred EehhccCCCHHHHHHHH-------------hhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe-
Confidence 99999999999887542 123467899999999999999999999 89999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.++.+||+|||++........ .....|++.|+|||++.+. ++.++|+||||+++|+|++|..||...........+
T Consensus 145 --~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 222 (265)
T cd08217 145 --ANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKI 222 (265)
T ss_pred --cCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHH
Confidence 478999999999987754433 3456799999999988654 578899999999999999999999887766666666
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
...... .....++..+.+++.+||..+|.+|||+.++++|||+
T Consensus 223 ~~~~~~---~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 223 KEGKFR---RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred hcCCCC---CCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 554322 1224578899999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=333.78 Aligned_cols=256 Identities=28% Similarity=0.446 Sum_probs=211.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+++++.+. ||||+++++.+...+.+++|+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEEE
Confidence 57888999999999999999999999999999876532 245567889999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||+++++|.+.+... ...+++..+..++.|++.||.|||+ .|++|+||||+||+++ .++.
T Consensus 79 e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~ 139 (265)
T cd06605 79 EYMDGGSLDKILKEV----------------QGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQ 139 (265)
T ss_pred EecCCCcHHHHHHHc----------------cCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCC
Confidence 999999998876432 2678899999999999999999999 9999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCC-----hhHHHHHHHh
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT-----EDGIFKEVLR 329 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~-----~~~~~~~i~~ 329 (577)
++|+|||.+........ ....++..|+|||.+.+. ++.++|||||||++|+|++|..||.... ..+....+..
T Consensus 140 ~~l~d~g~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 218 (265)
T cd06605 140 IKLCDFGVSGQLVNSLA-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN 218 (265)
T ss_pred EEEeecccchhhHHHHh-hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc
Confidence 99999999876543222 226789999999987654 5889999999999999999999996542 2233333333
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.... ......++.++.++|.+||..||.+|||+.+++.||||+.+.
T Consensus 219 ~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~~ 264 (265)
T cd06605 219 EPPP--RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKYE 264 (265)
T ss_pred CCCC--CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhccc
Confidence 3211 111112788999999999999999999999999999998753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-41 Score=331.06 Aligned_cols=249 Identities=19% Similarity=0.268 Sum_probs=205.8
Q ss_pred cceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+|++.+.||+|+||.||+|.++ ..+..||+|.+.... .......+.+|+.++..+ +||||+++++++...+.+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGNTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCCCc
Confidence 46999999999999999999865 456789999987542 223456788999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++||||+++|+|.+++... ...+++..++.++.||+.||+|||++|++||||||+|||++ .
T Consensus 82 ~lv~e~~~~~~L~~~l~~~----------------~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~---~ 142 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKH----------------EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN---S 142 (266)
T ss_pred EEEEEeCCCCcHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc---C
Confidence 9999999999998876432 35689999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCCcc--ccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
++.+||+|||.+.......... ...++..|+|||++.+ .++.++|||||||++|+|++ |..||++.+..+....+.
T Consensus 143 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~ 222 (266)
T cd05064 143 DLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVE 222 (266)
T ss_pred CCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH
Confidence 7899999999876543222111 2345678999998764 56889999999999999775 999999888877777665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+.. .+..+.++..+.+++.+||..+|.+|||+.++++
T Consensus 223 ~~~~---~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 223 DGFR---LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred CCCC---CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 4422 1223567899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-41 Score=336.71 Aligned_cols=268 Identities=21% Similarity=0.251 Sum_probs=204.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcC----------------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA----------------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~----------------~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 159 (577)
.+|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.++.++ +||||
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~ni 81 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRL-KDPNI 81 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCe
Confidence 579999999999999999997532 34579999886542 233456789999999999 59999
Q ss_pred eEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhh--HHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCcee
Q 008127 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA--WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 237 (577)
Q Consensus 160 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiH 237 (577)
+++++++...+..++||||+++|+|.+++............ ..........++...++.++.||+.||.|||+.||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999999999999999999999999987543211100000 0000112245788899999999999999999999999
Q ss_pred ccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh--C
Q 008127 238 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC--G 311 (577)
Q Consensus 238 rDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t--g 311 (577)
|||||+|||++ .++.+||+|||++........ .....++..|+|||++. +.++.++|||||||++|+|++ +
T Consensus 162 ~dlkp~Nill~---~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 162 RDLATRNCLVG---ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred cCcchhheEEc---CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 99999999998 478899999999986543322 12345678899999875 456899999999999999986 6
Q ss_pred CCCCCCCChhHHHHHHHh---CC-CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 312 RRPFWDKTEDGIFKEVLR---NK-PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 312 ~~Pf~~~~~~~~~~~i~~---~~-~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..||.+.+..+....+.. .. ........+.++..+.+|+.+||..||.+|||+.++.+
T Consensus 239 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 239 EQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 778877666655544322 11 11111123457889999999999999999999999843
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=327.68 Aligned_cols=254 Identities=31% Similarity=0.490 Sum_probs=212.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
+|+..+.||.|+||.||+|.+..++..||+|.+..... ........+.+|+.+++.+ +||||+++++++.....+|+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEE
Confidence 47788899999999999999988999999998865432 1233557789999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|+||+++++|.+++.. ...+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++
T Consensus 80 v~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~---~~~ 139 (258)
T cd06632 80 FLELVPGGSLAKLLKK-----------------YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD---TNG 139 (258)
T ss_pred EEEecCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCC
Confidence 9999999999887642 25688999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhccc-C-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-K-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++.............|++.|+|||.+.. . ++.++|+|||||++|+|++|..||...........+....
T Consensus 140 ~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~- 218 (258)
T cd06632 140 VVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK- 218 (258)
T ss_pred CEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc-
Confidence 899999999887654443445678999999998754 3 6889999999999999999999997766544444443311
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
. .....+.+++.+.+++.+||..+|.+|||+.+++.|||+
T Consensus 219 ~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 219 E-LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred c-CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 1 112234578999999999999999999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=345.50 Aligned_cols=259 Identities=28% Similarity=0.453 Sum_probs=206.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++.+.||+|+||.||+|.+..+|+.||||.+.+... .......+.+|+.+++++ +||||++++++|...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCCcc
Confidence 44689999999999999999999999999999999864322 223455678899999999 599999999988643
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|+||||+. ++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~-------------------~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~ 151 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQ-------------------MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 151 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHh-------------------hcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE
Confidence 35799999995 57766542 227888999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ .++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||...+....+..
T Consensus 152 ~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~ 228 (353)
T cd07850 152 K---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNK 228 (353)
T ss_pred C---CCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 8 478899999999987654444445678999999998765 458899999999999999999999987665444433
Q ss_pred HHhC----------------------CCCCCCCC-----------------CCCCCHHHHHHHHHccccCcCCCCCHHHH
Q 008127 327 VLRN----------------------KPDFRRKP-----------------WPSISNSAKDFVKKLLVKDPRARLTAAQA 367 (577)
Q Consensus 327 i~~~----------------------~~~~~~~~-----------------~~~~s~~~~~li~~~l~~dP~~Rpt~~~i 367 (577)
+... .+...... ....+..+.+||.+||+.||++|||+.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ei 308 (353)
T cd07850 229 IIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDA 308 (353)
T ss_pred HHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHH
Confidence 3221 01000000 11235678999999999999999999999
Q ss_pred hcCccccccC
Q 008127 368 LSHPWVREGG 377 (577)
Q Consensus 368 l~hp~f~~~~ 377 (577)
|.||||+.-.
T Consensus 309 L~~~~~~~~~ 318 (353)
T cd07850 309 LQHPYINVWY 318 (353)
T ss_pred hcChhHhhcc
Confidence 9999997533
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=344.05 Aligned_cols=262 Identities=31% Similarity=0.459 Sum_probs=209.3
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|.+.+.||.|+||.||+|++..+|+.||||.+..... .......+.+|+.+++.+ +||||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~~ 80 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHREA 80 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhc-CCCCccchHHheecccccc
Confidence 34689999999999999999999999999999999865322 222345677899999999 599999999987643
Q ss_pred -CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 -NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
..+|+|+||+. ++|.+.+. ....+++..+..++.||+.||.|||+++++||||||+||+++
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~-----------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~ 142 (337)
T cd07858 81 FNDVYIVYELMD-TDLHQIIR-----------------SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN 142 (337)
T ss_pred cCcEEEEEeCCC-CCHHHHHh-----------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc
Confidence 35899999995 67776553 236799999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++...... .......+|..|+|||.+.+ .++.++|||||||++|+|++|+.||.+.+......
T Consensus 143 ---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 219 (337)
T cd07858 143 ---ANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLK 219 (337)
T ss_pred ---CCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHH
Confidence 4788999999999876443 22345578999999998753 46889999999999999999999997655433222
Q ss_pred HHHh-----------------------CCCCCC----CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLR-----------------------NKPDFR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~-----------------------~~~~~~----~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+.. ..+... ...++.+++.+.+||.+||+.+|++|||+.++++||||.....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 220 LITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred HHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 2211 000000 0123568899999999999999999999999999999986543
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-41 Score=337.61 Aligned_cols=256 Identities=29% Similarity=0.440 Sum_probs=201.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN----- 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~----- 170 (577)
++|++.+.||+|+||.||+|.+..+++.||||.+...... ......+.+|+.+++++ .||||+++++++...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK-EGFPITALREIKILQLL-KHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhC-CCCCccceEEEEecccccccC
Confidence 3699999999999999999999999999999988643321 12234467899999999 5999999999887543
Q ss_pred ---eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 171 ---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..++||||+. ++|.+.+.. ....+++..++.++.||+.||.|||++|++|+||||+||++
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~----------------~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~ 152 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSN----------------KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI 152 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHh----------------cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence 4699999996 477665532 23468999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC-----CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||++....... ......++..|+|||++.+. ++.++||||||+++|+|++|..||.+...
T Consensus 153 ~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~ 229 (310)
T cd07865 153 T---KDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE 229 (310)
T ss_pred C---CCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 8 47899999999997653322 12345678899999987653 47899999999999999999999987765
Q ss_pred hHHHHHHHhCCCCCCCCCC----------------------------CCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 321 DGIFKEVLRNKPDFRRKPW----------------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~----------------------------~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
......+..-...++...+ ...+..+.+||.+||..||.+|||+.++|+|||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~ 309 (310)
T cd07865 230 QHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDF 309 (310)
T ss_pred HHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCC
Confidence 5444333221111110000 012467889999999999999999999999999
Q ss_pred c
Q 008127 373 V 373 (577)
Q Consensus 373 f 373 (577)
|
T Consensus 310 f 310 (310)
T cd07865 310 F 310 (310)
T ss_pred C
Confidence 8
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=330.81 Aligned_cols=255 Identities=27% Similarity=0.468 Sum_probs=213.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+-|++.+.||.|+||.||+|.+..++..||||.+..... ......+.+|+.++.++ +||||+++++++..++.+|+|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEEE
Confidence 358889999999999999999989999999998865432 23456788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++. ...+++..+..++.|++.|+.|||+.|++|+||||+||+++ .++.
T Consensus 81 ~e~~~~~~l~~~i~------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---~~~~ 139 (277)
T cd06641 81 MEYLGGGSALDLLE------------------PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGE 139 (277)
T ss_pred EEeCCCCcHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---CCCC
Confidence 99999999987652 24578999999999999999999999999999999999998 4678
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
++|+|||++....... ......|+..|+|||.+.+ ..+.++|+|||||++|+|++|..||...........+......
T Consensus 140 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 219 (277)
T cd06641 140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP 219 (277)
T ss_pred EEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCC
Confidence 9999999987654322 1234568899999998765 4578899999999999999999999876665555554333221
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.....++.++.+++.+||..+|.+||++.++++||||....
T Consensus 220 ---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 220 ---TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred ---CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 12235788999999999999999999999999999999753
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=340.67 Aligned_cols=263 Identities=29% Similarity=0.468 Sum_probs=204.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcC--CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~--~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~ 172 (577)
+|++.+.||+|+||.||+|.+.. +++.||+|.+.............+.+|+.+++.+ +||||+++++++.+. ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCceE
Confidence 48899999999999999999988 8999999998764322222345678899999999 599999999999987 889
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec-CC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS-AK 251 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~-~~ 251 (577)
|+||||+++ +|.+.+.... ......+++..++.++.||+.||.|||+.+|+||||||+||+++. ..
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~------------~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~ 146 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHR------------QAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGP 146 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhc------------cCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCC
Confidence 999999964 6766554321 112247899999999999999999999999999999999999983 12
Q ss_pred CCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH---
Q 008127 252 EDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG--- 322 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~--- 322 (577)
.++.+||+|||++........ ....++|+.|+|||++.+ .++.++|||||||++|+|++|++||.+.....
T Consensus 147 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~ 226 (316)
T cd07842 147 ERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKS 226 (316)
T ss_pred ccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccccccc
Confidence 278899999999986543221 234578999999998764 35889999999999999999999997654322
Q ss_pred ------HHHHHHhC--------------CCC-------CCCCCCC------------CCCHHHHHHHHHccccCcCCCCC
Q 008127 323 ------IFKEVLRN--------------KPD-------FRRKPWP------------SISNSAKDFVKKLLVKDPRARLT 363 (577)
Q Consensus 323 ------~~~~i~~~--------------~~~-------~~~~~~~------------~~s~~~~~li~~~l~~dP~~Rpt 363 (577)
.+..+... .+. .....++ ..+..+.++|.+||..||++|||
T Consensus 227 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps 306 (316)
T cd07842 227 NPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRIT 306 (316)
T ss_pred chhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcC
Confidence 11111110 000 0001111 46678999999999999999999
Q ss_pred HHHHhcCccc
Q 008127 364 AAQALSHPWV 373 (577)
Q Consensus 364 ~~~il~hp~f 373 (577)
+.++++||||
T Consensus 307 ~~eil~~~~f 316 (316)
T cd07842 307 AEEALEHPYF 316 (316)
T ss_pred HHHHhcCCCC
Confidence 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=336.87 Aligned_cols=255 Identities=27% Similarity=0.458 Sum_probs=212.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|.+.+.||.|+||.||+|.+..++..||+|.+..... ....+.+.+|+.+++++ +||||+++++++..++.+|+|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLWII 80 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceEEE
Confidence 457888999999999999999999999999998865432 23456789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+.+. ...+++..++.++.||+.||.|||++|++|+||+|+||+++ .++.
T Consensus 81 ~e~~~~~~L~~~~~------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~ 139 (277)
T cd06642 81 MEYLGGGSALDLLK------------------PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGD 139 (277)
T ss_pred EEccCCCcHHHHhh------------------cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCC
Confidence 99999999987652 24678999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
++|+|||++........ .....|+..|+|||.+.+. ++.++|||||||++|+|++|..||...........+.....
T Consensus 140 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~- 218 (277)
T cd06642 140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP- 218 (277)
T ss_pred EEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCC-
Confidence 99999999976543321 2234688999999988654 57899999999999999999999976655554443332221
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
......++..+.++|.+||..+|.+|||+.++++||||+...
T Consensus 219 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 219 --PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred --CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 111234678899999999999999999999999999998653
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-42 Score=360.24 Aligned_cols=261 Identities=21% Similarity=0.342 Sum_probs=218.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.+.+..+.||+|+||+||+|.... .-..||||.++... ......+|++|++++..| +|||||+|+|+|..++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l-~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAEL-QHPNIVRLLGVCREGD 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEccCC
Confidence 356778899999999999997532 33579999987654 345788999999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+|+|||..|||.++|............-.. ...+|+..+.+.|+.||+.|++||-++.+|||||-..|+|++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~---~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg-- 637 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQD---TPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG-- 637 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec--
Confidence 999999999999999999765332221100000 035599999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCCcc---ccccCCccccchh-cccCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~-~~~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
++..|||+|||+++.+-..+.+. ...-..+|||||. +.++++++|||||+||+|||+++ |+.||.+.+.++++.
T Consensus 638 -e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 638 -ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred -cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 68999999999999775444332 2234568999995 57899999999999999999998 999999999999999
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
.|..+.. ... ..++|.++.+||..||+.+|++||++++|-
T Consensus 717 ~i~~g~l-L~~--Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 717 CIRAGQL-LSC--PENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HHHcCCc-ccC--CCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 9988765 332 367899999999999999999999999873
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=345.86 Aligned_cols=268 Identities=22% Similarity=0.280 Sum_probs=208.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|++++.||+|+||.||+|.+... +..||||++.... .....+.+.+|+.++.++..||||+++++++...
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 35799999999999999999987533 3469999986542 2334567899999999995699999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhh-----------------------------------------------------
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTT----------------------------------------------------- 196 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~----------------------------------------------------- 196 (577)
+.+|||||||++|+|.+++........
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 999999999999999998876421100
Q ss_pred --------------------------hhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 197 --------------------------LTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 197 --------------------------~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..............+++..++.++.||+.||.|||+.+|+||||||+|||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~-- 271 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA-- 271 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe--
Confidence 0000011111234688999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||+++....... .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||..........
T Consensus 272 -~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~ 350 (400)
T cd05105 272 -QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY 350 (400)
T ss_pred -CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHH
Confidence 477899999999976543221 223457788999998764 46889999999999999997 999998766554444
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+...... .....++..+.+++.+||..||++|||+.++.+
T Consensus 351 ~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 351 NKIKSGYRM--AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHhcCCCC--CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 443333222 222467889999999999999999999988865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-41 Score=343.73 Aligned_cols=261 Identities=31% Similarity=0.489 Sum_probs=209.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+..+|.+.+.||.|+||.||+|.+..+|+.||+|.+..... ...+.+.+|+++++.+ +||||+++++++...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~ 78 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDL 78 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhc-CCCcchhhHhhhccccccc
Confidence 34689999999999999999999999999999999865542 3456788999999999 599999999876543
Q ss_pred ----------CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q 008127 170 ----------NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239 (577)
Q Consensus 170 ----------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrD 239 (577)
..+|+||||++ ++|.+.+. ...+++..++.++.||+.||.|||+.||+|||
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givH~d 139 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYME-TDLANVLE------------------QGPLSEEHARLFMYQLLRGLKYIHSANVLHRD 139 (342)
T ss_pred ccccccccccceEEEEeeccc-ccHHHHHH------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 35899999996 57766442 24688999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCC
Q 008127 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 240 lKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~ 313 (577)
|||+||+++. .+..+||+|||++........ .....|+..|+|||++.+ .++.++|||||||++|+|++|+.
T Consensus 140 ikp~Nili~~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~ 217 (342)
T cd07854 140 LKPANVFINT--EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKP 217 (342)
T ss_pred CCHHHEEEcC--CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCC
Confidence 9999999974 456799999999976532211 123468899999997643 35789999999999999999999
Q ss_pred CCCCCChhHHHHHHHhCCCCC----------------------CC----CCCCCCCHHHHHHHHHccccCcCCCCCHHHH
Q 008127 314 PFWDKTEDGIFKEVLRNKPDF----------------------RR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQA 367 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~~~~~~----------------------~~----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~i 367 (577)
||.+....+....++...+.. .. ...+.++.++.+||.+||..||.+|||+.++
T Consensus 218 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el 297 (342)
T cd07854 218 LFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEA 297 (342)
T ss_pred CCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHH
Confidence 998776655555443321100 00 0123577889999999999999999999999
Q ss_pred hcCccccccCCC
Q 008127 368 LSHPWVREGGDA 379 (577)
Q Consensus 368 l~hp~f~~~~~~ 379 (577)
+.||||+.....
T Consensus 298 l~h~~~~~~~~~ 309 (342)
T cd07854 298 LMHPYMSCYSCP 309 (342)
T ss_pred hCCCccccccCC
Confidence 999999865443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-41 Score=335.11 Aligned_cols=255 Identities=32% Similarity=0.522 Sum_probs=207.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.+..+++.||||.+..... .......+.+|+++++++. ||||+++++++...+.+++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcC-CCCeeehhheEEECCEEEEEE
Confidence 69999999999999999999999999999998865432 2234577899999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++++.+.... . +...+++..+..++.||+.||.|||..+++||||+|+||+++ .++.+
T Consensus 80 e~~~~~~l~~~~-~----------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~---~~~~~ 139 (288)
T cd07833 80 EYVERTLLELLE-A----------------SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS---ESGVL 139 (288)
T ss_pred ecCCCCHHHHHH-h----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCE
Confidence 999876554322 1 235689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC--CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC-
Q 008127 257 KATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK- 331 (577)
Q Consensus 257 kl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~- 331 (577)
||+|||++....... ......++..|+|||++.+. ++.++||||||+++|+|++|+.||.+....+.+..+....
T Consensus 140 kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~ 219 (288)
T cd07833 140 KLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLG 219 (288)
T ss_pred EEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 999999998765443 33456789999999987654 4789999999999999999999998765544333322100
Q ss_pred -------------CCCC-----CC--------CC-CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 332 -------------PDFR-----RK--------PW-PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 332 -------------~~~~-----~~--------~~-~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
..+. .. .+ ..++.++.+||++||..+|.+|||+.++++||||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 220 PLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred CCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0000 00 01 1247889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=328.81 Aligned_cols=255 Identities=26% Similarity=0.455 Sum_probs=209.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++.+.||.|+||.||+|++..+++.||||.+.............+.+|+.+++.+ +||||+++++++...+.+++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEEE
Confidence 4699999999999999999999999999999988664444445567789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
+||+++|+|.+.+... ......+++..+..++.||+.||.|||+++++|+||||+||+++ .++.
T Consensus 81 ~e~~~~~~L~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~ 144 (267)
T cd08228 81 LELADAGDLSQMIKYF-------------KKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGV 144 (267)
T ss_pred EEecCCCcHHHHHHHh-------------hhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCC
Confidence 9999999998876432 11235688999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~--~~~~~~i~~~~ 331 (577)
++|+|||++........ .....|++.|+|||.+.+ ..+.++||||||+++|+|++|..||..... ......+...
T Consensus 145 ~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~- 223 (267)
T cd08228 145 VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQC- 223 (267)
T ss_pred EEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcC-
Confidence 99999999887643222 234578899999998764 458899999999999999999999965432 2333333221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.++......++..+.++|.+||..+|.+|||+.++++
T Consensus 224 -~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 224 -DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred -CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 2222223357788999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=330.24 Aligned_cols=261 Identities=29% Similarity=0.430 Sum_probs=209.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~l 174 (577)
+|+..+.||.|++|.||+|.+..+++.||+|.+..... ......+.+|+++++++ +||||++++++|.. .+.+|+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCeEEE
Confidence 68999999999999999999999999999999875432 23457789999999999 59999999998864 447899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+.+... ......+++..+..++.||+.||.|||+.|++|+||+|+||+++ .++
T Consensus 79 v~e~~~~~~L~~~l~~~-------------~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~---~~~ 142 (287)
T cd06621 79 AMEYCEGGSLDSIYKKV-------------KKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---RKG 142 (287)
T ss_pred EEEecCCCCHHHHHHHH-------------HhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---cCC
Confidence 99999999998876432 12346689999999999999999999999999999999999998 467
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCC-----hhHHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT-----EDGIFKEVL 328 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~-----~~~~~~~i~ 328 (577)
.++|+|||++....... .....++..|+|||.+.+ .++.++|||||||++|+|++|..||.... ..+....+.
T Consensus 143 ~~~l~dfg~~~~~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 221 (287)
T cd06621 143 QVKLCDFGVSGELVNSL-AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV 221 (287)
T ss_pred eEEEeeccccccccccc-cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh
Confidence 89999999987654322 234568889999998764 46889999999999999999999997652 233333333
Q ss_pred hCCCC-CCCCCC--CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 329 RNKPD-FRRKPW--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 329 ~~~~~-~~~~~~--~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..... ...... ...++.+.+||.+||..+|.+|||+.+++.||||+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 222 NMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred cCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 32211 111111 12467899999999999999999999999999997654
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=365.33 Aligned_cols=264 Identities=28% Similarity=0.388 Sum_probs=207.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.++||+|+||.||+|++..+|+.||||++.......+.....+.+|+.+++.+ +||||+++++++.+.+..|+|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEEEE
Confidence 4799999999999999999999999999999998764433344567799999999999 499999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++||+|.+.+.......... ......++...+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~------e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd---~dg~ 151 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLS------KELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG---LFGE 151 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccc------hhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc---CCCC
Confidence 99999999998875421110000 01124467778899999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-------------------CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPG-------------------KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPF 315 (577)
Q Consensus 256 vkl~DFGla~~~~~~-------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf 315 (577)
+||+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|+||..||
T Consensus 152 vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF 231 (932)
T PRK13184 152 VVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY 231 (932)
T ss_pred EEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence 999999999765211 011235799999999988654 588999999999999999999999
Q ss_pred CCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 316 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 316 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
................+. ...++..+++.+.+++.+||..||++||+..+.+.+
T Consensus 232 ~~~~~~ki~~~~~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 232 RRKKGRKISYRDVILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred CCcchhhhhhhhhccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 775544332221111111 112235688999999999999999999987766654
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=333.08 Aligned_cols=256 Identities=25% Similarity=0.481 Sum_probs=208.8
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|++|.||+|++..+|..||||++..... ......+.+|+.+++.+ +||||+++++++...+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEEE
Confidence 48999999999999999999999999999999875432 22345677899999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++ +|.+++... .....+++..+..++.||+.||.|||+.|++||||||+||+++ .++.+
T Consensus 78 e~~~~-~l~~~~~~~--------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~---~~~~~ 139 (284)
T cd07836 78 EYMDK-DLKKYMDTH--------------GVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN---KRGEL 139 (284)
T ss_pred ecCCc-cHHHHHHhc--------------CCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCcE
Confidence 99975 787766432 1124689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC-
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP- 332 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~- 332 (577)
+|+|||++...... .......+|+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+.....
T Consensus 140 ~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 219 (284)
T cd07836 140 KLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGT 219 (284)
T ss_pred EEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence 99999999765332 222345678999999987553 47889999999999999999999988776665555433210
Q ss_pred -------------CCCCC-----------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 -------------DFRRK-----------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 -------------~~~~~-----------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+... ..+.++..+.++|.+||+.||.+||++.++++||||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 220 PTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 00000 013457789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=330.87 Aligned_cols=256 Identities=28% Similarity=0.506 Sum_probs=211.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEcCCeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~l 174 (577)
.|++.+.||.|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.+. .|||++++++++.....+|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP--DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC--chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 47888999999999999999999999999999865422 234567889999999985 49999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++. ...+++..++.++.|++.||.|||+.||+|+||+|+||+++ .++
T Consensus 80 v~e~~~~~~L~~~~~------------------~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---~~~ 138 (277)
T cd06917 80 IMEYAEGGSVRTLMK------------------AGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---NTG 138 (277)
T ss_pred EEecCCCCcHHHHHH------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---CCC
Confidence 999999999987652 24688999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCC-CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 255 SLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
.++|+|||++....... ......|+..|+|||.+.+ .++.++|+|||||++|+|++|..||.+.........+....
T Consensus 139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~ 218 (277)
T cd06917 139 NVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK 218 (277)
T ss_pred CEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC
Confidence 89999999998765432 2234579999999998764 24789999999999999999999997765544443332221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+......++.++.+++.+||..||.+||++.+++.||||++..
T Consensus 219 --~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 219 --PPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred --CCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 11111223778999999999999999999999999999998754
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=327.35 Aligned_cols=255 Identities=27% Similarity=0.519 Sum_probs=213.8
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||.|+||.||+|.++.+|..||+|.+...... ....+.+.+|+.+++.+ +||||+++++.+...+.+|+|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEEEE
Confidence 488999999999999999999999999999998664321 23456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++... ....+++..+..++.|++.||.|||+.+++|+||||+||+++. .+..+
T Consensus 79 e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~~ 141 (257)
T cd08225 79 EYCDGGDLMKRINRQ---------------RGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK--NGMVA 141 (257)
T ss_pred ecCCCCcHHHHHHhc---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC--CCCeE
Confidence 999999999877532 2345789999999999999999999999999999999999984 33467
Q ss_pred eEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||.+........ .....|++.|+|||++.+ .++.++|+|||||++|+|++|..||...+.......+......
T Consensus 142 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 220 (257)
T cd08225 142 KLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA- 220 (257)
T ss_pred EecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCC-
Confidence 9999999987654332 223468999999998764 4688999999999999999999999877766666655544322
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
...+.++..+.++|.+||..+|++|||+.+++.||||
T Consensus 221 --~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 221 --PISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 1224578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=332.51 Aligned_cols=255 Identities=25% Similarity=0.407 Sum_probs=201.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|.+.+.||+|+||.||+|.+..+|..||+|.+..... ......+.+|+.+++.+ +||||+++++++..++..|+|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEEEE
Confidence 579999999999999999999999999999999865432 12234567899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+. ++|.+.+... ...+++..+..++.||+.||.|||+.||+||||||+|||++ .++.
T Consensus 82 ~e~~~-~~l~~~~~~~----------------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---~~~~ 141 (291)
T cd07870 82 FEYMH-TDLAQYMIQH----------------PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---YLGE 141 (291)
T ss_pred Eeccc-CCHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---CCCc
Confidence 99995 6777655322 24578888999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChh-HHHHHHHhC-
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN- 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~i~~~- 330 (577)
+||+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|..||.+.... +.+..+...
T Consensus 142 ~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~ 221 (291)
T cd07870 142 LKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVL 221 (291)
T ss_pred EEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHc
Confidence 999999998764322 22344568999999998865 3578899999999999999999999765432 222222110
Q ss_pred -------------CCCCCCC------------CCC--CCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 331 -------------KPDFRRK------------PWP--SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 331 -------------~~~~~~~------------~~~--~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+.+... .|. ..+..+.+++.+||..||.+|||+.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 222 GVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred CCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 0000000 011 125688999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=332.65 Aligned_cols=257 Identities=25% Similarity=0.370 Sum_probs=211.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+..+|+.||+|++.... .+.....+.+|+++++.+ +||||+++++++...+.+|+|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEEE
Confidence 46899999999999999999999999999999876542 233467789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||+++++|.+.+.. .+.+++..+..++.+++.||.|||+ .+++||||||+||+++ .++
T Consensus 82 ~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~ 141 (284)
T cd06620 82 MEFMDCGSLDRIYKK-----------------GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN---SRG 141 (284)
T ss_pred EecCCCCCHHHHHHh-----------------ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC---CCC
Confidence 999999999876532 2568999999999999999999997 6999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCCChh-----------H
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTED-----------G 322 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-----------~ 322 (577)
.++|+|||++...... .....+||..|+|||++. +.++.++|||||||++|+|++|..||...... +
T Consensus 142 ~~~l~d~gl~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 220 (284)
T cd06620 142 QIKLCDFGVSGELINS-IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD 220 (284)
T ss_pred cEEEccCCcccchhhh-ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH
Confidence 8999999998754322 223457999999999875 45688999999999999999999999765432 2
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
....+..... +......++..+.+|+.+||..||.+|||+.++++||||.....
T Consensus 221 ~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~ 274 (284)
T cd06620 221 LLQQIVQEPP--PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALR 274 (284)
T ss_pred HHHHHhhccC--CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 2333333221 11112237789999999999999999999999999999977544
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=326.82 Aligned_cols=254 Identities=28% Similarity=0.466 Sum_probs=215.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|++|.||+|.+..+++.||||++..... +.....+.+|+.++.++. ||||+++++++...+.+++||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEEE
Confidence 58899999999999999999999999999999876542 135677999999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||+++++|.+++... ..+++..++.++.||+.||.|||+ .+++||||+|+||+++ .++.
T Consensus 79 e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~---~~~~ 138 (264)
T cd06623 79 EYMDGGSLADLLKKV-----------------GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN---SKGE 138 (264)
T ss_pred EecCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC---CCCC
Confidence 999999998877432 678999999999999999999999 9999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCCc-cccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCC---ChhHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK---TEDGIFKEVLRN 330 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~-~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~---~~~~~~~~i~~~ 330 (577)
++|+|||++......... ....++..|+|||.+.+. ++.++|+||||+++|+|++|..||... ...+....+...
T Consensus 139 ~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 218 (264)
T cd06623 139 VKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG 218 (264)
T ss_pred EEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC
Confidence 999999999876543332 256789999999987654 578999999999999999999999776 334444444432
Q ss_pred CCCCCCCCCCC-CCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 331 KPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~-~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
... ..... ++..+.++|.+||..+|.+|||+.++++||||+..
T Consensus 219 ~~~---~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 219 PPP---SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred CCC---CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 221 11223 78899999999999999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=335.66 Aligned_cols=266 Identities=24% Similarity=0.329 Sum_probs=207.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCE--EEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~--vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
++|++.+.||+|+||.||+|.++.++.. +|+|.+... ........+.+|+.++.++.+||||+++++++..++.+|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 3689999999999999999998888765 477665432 223455678899999999966999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+++|+|.+++......... ............+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~---~~ 160 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETD-PAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---EN 160 (303)
T ss_pred EEEEeCCCCcHHHHHHhccccccc-ccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec---CC
Confidence 999999999999988654211000 00001111234689999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+.+||+|||++.............++..|+|||.+.+. ++.++|||||||++|+|+| |..||.+.+..+....+....
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~ 240 (303)
T cd05088 161 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 240 (303)
T ss_pred CcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC
Confidence 78999999998643221111122346679999987654 5889999999999999998 999998877776666553321
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
....+..+++++.+|+.+||..+|.+||++.+++.+
T Consensus 241 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 241 ---RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ---cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 111223578899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=333.05 Aligned_cols=253 Identities=35% Similarity=0.663 Sum_probs=217.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||.|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++++.+||||+++++++...+.+++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 69999999999999999999999999999999876544444456778899999999955999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++ .++.+
T Consensus 82 e~~~~~~L~~~l~~~-----------------~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~---~~~~~ 141 (280)
T cd05581 82 EYAPNGELLQYIRKY-----------------GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---KDMHI 141 (280)
T ss_pred cCCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCE
Confidence 999999998877432 5799999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC---------------------CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCC
Q 008127 257 KATDFGLSDFIKPGK---------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRP 314 (577)
Q Consensus 257 kl~DFGla~~~~~~~---------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~P 314 (577)
+|+|||++....... ......|+..|+|||++.+. ++.++||||||+++++|++|..|
T Consensus 142 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p 221 (280)
T cd05581 142 KITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP 221 (280)
T ss_pred EecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCC
Confidence 999999987654321 12234688999999987654 57889999999999999999999
Q ss_pred CCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCH----HHHhcCccc
Q 008127 315 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWV 373 (577)
Q Consensus 315 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~----~~il~hp~f 373 (577)
|...+....+..+......++ ..+++.+.+||.+||+.+|.+|||+ .++++||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 222 FRGSNEYLTFQKILKLEYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCccHHHHHHHHHhcCCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 988776666666654433322 4568899999999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=332.19 Aligned_cols=265 Identities=19% Similarity=0.264 Sum_probs=211.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC-----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.+|++.+.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.++..+ +||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhc-CCcccceEEEEEcCCC
Confidence 36899999999999999999876554 679999886443 234556789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..|++|||+++|+|.+++........... ..........+++..++.++.||+.||.|||++|++||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~-- 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGA-ESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG-- 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCccccc-ccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc--
Confidence 99999999999999988865311100000 000001125688999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCC---CccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++....... ......+++.|+|||.+. +.++.++|||||||++|||++ |..||.+....++..
T Consensus 159 -~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~ 237 (283)
T cd05048 159 -EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIE 237 (283)
T ss_pred -CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 47789999999997653322 123446788999999775 456889999999999999998 999999888887777
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+....... ....+++++.+|+.+||..||.+||++.+++++
T Consensus 238 ~i~~~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 238 MIRSRQLLP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHcCCcCC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 766543221 224688999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=360.28 Aligned_cols=268 Identities=21% Similarity=0.257 Sum_probs=196.6
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCC-CEEEEE--------------EecccccCchhhHHHHHHHHHHHHHhcCC
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANG-DRVAVK--------------KIEKNKMILPIAVEDVKREVKILQALAGH 156 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vaiK--------------~i~~~~~~~~~~~~~~~~E~~~l~~l~~h 156 (577)
..+..+|++++.||+|+||+||+|..+... ..+++| .+.+...........+.+|+.+|+++ +|
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l-~H 222 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL-NH 222 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-CC
Confidence 345678999999999999999998764322 222222 11111111123456688999999999 59
Q ss_pred CCeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCce
Q 008127 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 236 (577)
Q Consensus 157 pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~ii 236 (577)
|||+++++++...+..|+|++++ +++|.+++..... ..........++.++.||+.||.|||++|||
T Consensus 223 pnIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~------------~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIi 289 (501)
T PHA03210 223 ENILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAF------------DWKDRPLLKQTRAIMKQLLCAVEYIHDKKLI 289 (501)
T ss_pred CCcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccc------------cccccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence 99999999999999999999999 4678777654311 1123345677889999999999999999999
Q ss_pred eccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCC
Q 008127 237 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 237 HrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~ 313 (577)
||||||+|||++ .++.+||+|||++..+..... ....+||+.|+|||++.+ .++.++|||||||++|||++|..
T Consensus 290 HrDLKP~NILl~---~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~ 366 (501)
T PHA03210 290 HRDIKLENIFLN---CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDF 366 (501)
T ss_pred cCCCCHHHEEEC---CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 999999999998 478899999999987654322 234689999999998865 46889999999999999999876
Q ss_pred CCCCC---ChhHHHHHHHhCCC----CCCC----------------C--------CCCCCCHHHHHHHHHccccCcCCCC
Q 008127 314 PFWDK---TEDGIFKEVLRNKP----DFRR----------------K--------PWPSISNSAKDFVKKLLVKDPRARL 362 (577)
Q Consensus 314 Pf~~~---~~~~~~~~i~~~~~----~~~~----------------~--------~~~~~s~~~~~li~~~l~~dP~~Rp 362 (577)
|++.. .....+.+++.... .++. . ....++..+.++|.+||.+||.+||
T Consensus 367 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rp 446 (501)
T PHA03210 367 CPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRP 446 (501)
T ss_pred CCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCc
Confidence 55432 22222222222100 0000 0 0012556788899999999999999
Q ss_pred CHHHHhcCcccccc
Q 008127 363 TAAQALSHPWVREG 376 (577)
Q Consensus 363 t~~~il~hp~f~~~ 376 (577)
|+.++|.||||...
T Consensus 447 sa~elL~hp~f~~~ 460 (501)
T PHA03210 447 GAAELLALPLFSAE 460 (501)
T ss_pred CHHHHhhChhhhcC
Confidence 99999999999864
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-42 Score=343.96 Aligned_cols=250 Identities=26% Similarity=0.397 Sum_probs=209.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+...+...||+|.||+||+|++.. .||||++...... +...+.|++|+.++++-+ |-||+-+.|+|..++. .|
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt-~~qlqaFKnEVa~lkkTR-H~NIlLFMG~~~~p~~-AI 464 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPT-PEQLQAFKNEVAVLKKTR-HENILLFMGACMNPPL-AI 464 (678)
T ss_pred HHHhhccceeccccccceeeccccc---ceEEEEEecCCCC-HHHHHHHHHHHHHHhhcc-hhhheeeehhhcCCce-ee
Confidence 3457788999999999999998764 6999999876553 458899999999999996 9999999999998887 99
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|+.+|+|-+|+.+|+.. ...|.....+.|++||+.|+.|||.++|||||||..||+|. +++
T Consensus 465 iTqwCeGsSLY~hlHv~----------------etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~---~~~ 525 (678)
T KOG0193|consen 465 ITQWCEGSSLYTHLHVQ----------------ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLH---EDL 525 (678)
T ss_pred eehhccCchhhhhccch----------------hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEc---cCC
Confidence 99999999999988643 35678889999999999999999999999999999999998 468
Q ss_pred CeeEEecCCCcccC---CCCCccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 255 SLKATDFGLSDFIK---PGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 255 ~vkl~DFGla~~~~---~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.|||+|||++.... ....+....|...|||||++.. .+++.+||||||||+|||++|..||.....+.++-.+
T Consensus 526 kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV 605 (678)
T KOG0193|consen 526 KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV 605 (678)
T ss_pred cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe
Confidence 99999999986432 2233445678889999999863 4588999999999999999999999977777776665
Q ss_pred HhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
-++...... ....+.++++++|+..||.++|++||+..+||.
T Consensus 606 GrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 606 GRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred cccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 555222111 123456779999999999999999999999876
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-42 Score=332.24 Aligned_cols=274 Identities=29% Similarity=0.459 Sum_probs=224.4
Q ss_pred CCccccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch----hhHHHHHHHHHHHHHhcCCCCeeEE
Q 008127 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP----IAVEDVKREVKILQALAGHENVVKF 162 (577)
Q Consensus 87 ~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~----~~~~~~~~E~~~l~~l~~hpniv~~ 162 (577)
.|.....+.++|.++.+||+|+|+.||+|.|....++||||+-..++.|.. ...+...+|.+|.+.| +||.||++
T Consensus 454 QFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKl 532 (775)
T KOG1151|consen 454 QFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKL 532 (775)
T ss_pred hhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeee
Confidence 344455677899999999999999999999999999999998665544433 3456678999999999 79999999
Q ss_pred EEEEE-cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--Cceecc
Q 008127 163 YNAFE-DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRD 239 (577)
Q Consensus 163 ~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~--~iiHrD 239 (577)
|++|. +.+.+|-|+|||+|.+|.-+|.+ +..+++.+++.|+.||+.||.||... .|||-|
T Consensus 533 YDyfslDtdsFCTVLEYceGNDLDFYLKQ-----------------hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYD 595 (775)
T KOG1151|consen 533 YDYFSLDTDSFCTVLEYCEGNDLDFYLKQ-----------------HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYD 595 (775)
T ss_pred eeeeeeccccceeeeeecCCCchhHHHHh-----------------hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeec
Confidence 99997 55678999999999998766544 47799999999999999999999975 699999
Q ss_pred CCCCcEEeecCCCCCCeeEEecCCCcccCCCCC--------ccccccCCccccchhcc-c----CCCCCCchhhHHHHHH
Q 008127 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLK-R----KSGPESDVWSIGVITY 306 (577)
Q Consensus 240 lKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~--------~~~~~gt~~y~aPE~~~-~----~~~~~~DiwSlG~il~ 306 (577)
|||.||||.+....|.+||+|||+++.+..... .....||.||++||+|. + +.+.++||||+|||+|
T Consensus 596 LKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFy 675 (775)
T KOG1151|consen 596 LKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFY 675 (775)
T ss_pred cCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhh
Confidence 999999998766678999999999998754321 23468999999999874 3 2378899999999999
Q ss_pred HHHhCCCCCCCC-ChhHHHHH-HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 307 ILLCGRRPFWDK-TEDGIFKE-VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 307 el~tg~~Pf~~~-~~~~~~~~-i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+++|+.||... +..+++.. .+....+...++-|.++.++++||++||.+.-++|....++..||||..+..
T Consensus 676 QClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~r 749 (775)
T KOG1151|consen 676 QCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIR 749 (775)
T ss_pred hhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchhh
Confidence 999999999654 33344332 1222333444455779999999999999999999999999999999987543
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=326.00 Aligned_cols=249 Identities=27% Similarity=0.433 Sum_probs=201.1
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
...||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++..++..++|+||++
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 88 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKIFMEQVP 88 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEEEEecCC
Confidence 357999999999999999999999999886543 23456789999999999 49999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCC--CHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeE
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRY--TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl 258 (577)
+++|.+.+... ...+ ++..+..++.||+.||.|||+.||+||||||+||+++. .++.++|
T Consensus 89 ~~~L~~~l~~~----------------~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~--~~~~~~l 150 (268)
T cd06624 89 GGSLSALLRSK----------------WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT--YSGVVKI 150 (268)
T ss_pred CCCHHHHHHHh----------------cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCeEEE
Confidence 99999877533 1234 77888899999999999999999999999999999973 3568999
Q ss_pred EecCCCcccCCCC-CccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHhCCCCCCCCChhH-HHHHHHhCCCC
Q 008127 259 TDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPD 333 (577)
Q Consensus 259 ~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~-~~~~i~~~~~~ 333 (577)
+|||++....... ......|++.|+|||++.+. ++.++||||||+++|+|++|+.||....... ........ .
T Consensus 151 ~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~--~ 228 (268)
T cd06624 151 SDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF--K 228 (268)
T ss_pred ecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh--c
Confidence 9999987654322 22345689999999987542 5789999999999999999999996543221 11111100 1
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
........+++++.+|+.+||..+|.+|||+.+++.||||
T Consensus 229 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 229 IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 1111124578899999999999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=319.37 Aligned_cols=257 Identities=24% Similarity=0.462 Sum_probs=224.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|.++++||+|+|++|.+++.++|.+.||+|++++.-.........+..|-.+..+.++||.+|.+..+|..+..+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 46999999999999999999999999999999998876666667788899999999999999999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
.||++||+|.-++.+ ...+++++++.+...|+.||+|||++|||+||||.+|+|++. .++
T Consensus 330 ieyv~ggdlmfhmqr-----------------qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvllda---egh 389 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQR-----------------QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDA---EGH 389 (593)
T ss_pred EEEecCcceeeehhh-----------------hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEcc---CCc
Confidence 999999999765543 378999999999999999999999999999999999999994 789
Q ss_pred eeEEecCCCcc-cCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCC-------CCChhHH-HH
Q 008127 256 LKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFW-------DKTEDGI-FK 325 (577)
Q Consensus 256 vkl~DFGla~~-~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~-------~~~~~~~-~~ 325 (577)
+||+|+|+++. +.++....++||||.|+|||++.+. |+..+|+|+|||+++||+.|+.||. +.+.++. ++
T Consensus 390 ikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfq 469 (593)
T KOG0695|consen 390 IKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQ 469 (593)
T ss_pred eeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHH
Confidence 99999999975 5667778899999999999999875 7999999999999999999999993 2333344 44
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC------CHHHHhcCcccccc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL------TAAQALSHPWVREG 376 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp------t~~~il~hp~f~~~ 376 (577)
-|+......++ .+|-.+..+++..|.+||.+|. ...++..|+||+..
T Consensus 470 vilekqiripr----slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 470 VILEKQIRIPR----SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI 522 (593)
T ss_pred HHhhhcccccc----eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence 44444444333 4677788999999999999997 46899999999864
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=342.43 Aligned_cols=263 Identities=31% Similarity=0.495 Sum_probs=209.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----CC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DN 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~ 170 (577)
..+|++.+.||.|+||.||+|.+..+|..||+|++..... .......+.+|+.+++++. ||||+++++++.. ..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADFK 81 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCCc
Confidence 3679999999999999999999999999999999875432 1234566788999999995 9999999988753 45
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+||||+. |+|.+.+. ....+++..++.++.||+.||.|||++||+||||||+||+++
T Consensus 82 ~~~lv~e~~~-~~l~~~~~-----------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~-- 141 (334)
T cd07855 82 DVYVVMDLME-SDLHHIIH-----------------SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN-- 141 (334)
T ss_pred eEEEEEehhh-hhHHHHhc-----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc--
Confidence 7899999995 57766553 235689999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC-----ccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~ 323 (577)
.++.+||+|||++........ ....+|+..|+|||++.+ .++.++|||||||++|+|++|+.||.+......
T Consensus 142 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~ 220 (334)
T cd07855 142 -EDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ 220 (334)
T ss_pred -CCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH
Confidence 478999999999976532211 134578999999998754 358899999999999999999999977654433
Q ss_pred HHHHHhC-----------------------CCCCCCCC----CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 324 FKEVLRN-----------------------KPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 324 ~~~i~~~-----------------------~~~~~~~~----~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
+..+... ........ ++.++.++.++|.+||+.+|.+|||+.+++.||||...
T Consensus 221 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~ 300 (334)
T cd07855 221 LKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY 300 (334)
T ss_pred HHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence 3222211 01111111 24578899999999999999999999999999999876
Q ss_pred CCCC
Q 008127 377 GDAS 380 (577)
Q Consensus 377 ~~~~ 380 (577)
....
T Consensus 301 ~~~~ 304 (334)
T cd07855 301 HDPD 304 (334)
T ss_pred cCCc
Confidence 5443
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=334.08 Aligned_cols=255 Identities=30% Similarity=0.548 Sum_probs=212.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|.....||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.++..+ +||||+++++.+..++.+|+|||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEEEEEe
Confidence 4555679999999999999999999999999865432 2346688999999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++++|.+.+. ...+++..++.++.|++.||.|||++||+||||||+||+++ .++.+|
T Consensus 99 ~~~~~~L~~~~~------------------~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~---~~~~~k 157 (297)
T cd06659 99 FLQGGALTDIVS------------------QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT---LDGRVK 157 (297)
T ss_pred cCCCCCHHHHHh------------------hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc---cCCcEE
Confidence 999999877542 24578999999999999999999999999999999999998 478999
Q ss_pred EEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 258 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 258 l~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
|+|||++....... ......|++.|+|||++.+ .++.++|||||||++|+|++|+.||......+.+..+...... .
T Consensus 158 L~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~ 236 (297)
T cd06659 158 LSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP-K 236 (297)
T ss_pred EeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC-C
Confidence 99999987554322 2234679999999998865 4588999999999999999999999877766665555433222 2
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
...+..++..+.++|.+||+.+|.+||++.++++||||.....
T Consensus 237 ~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 237 LKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 2234567889999999999999999999999999999987553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=328.61 Aligned_cols=259 Identities=22% Similarity=0.309 Sum_probs=209.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
+.|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+ +||||+++++++...+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKF-NHQNIVRLIGVSFERL 82 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCC
Confidence 569999999999999999999877 77889999876432 233456788999999999 5999999999999988
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++||||++|++|.+++...... ......+++..++.++.||+.||.|||+++++||||||+|||++..
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~----------~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~ 152 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPR----------PERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCK 152 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCC----------CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEecc
Confidence 999999999999999887654210 0112368999999999999999999999999999999999999864
Q ss_pred CCCCCeeEEecCCCcccCCCCCc---cccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
+....+||+|||+++........ ....++..|+|||++. +.++.++|||||||++|+|++ |..||.+.+..+...
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~ 232 (277)
T cd05036 153 GPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVME 232 (277)
T ss_pred CCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 44567999999999876322211 1223456799999875 456899999999999999997 999998887777666
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+..... . .....++..+.+++.+||..+|++|||+.++++|
T Consensus 233 ~~~~~~~-~--~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 233 FVTGGGR-L--DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHcCCc-C--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 5554322 1 1224578999999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=331.63 Aligned_cols=256 Identities=27% Similarity=0.524 Sum_probs=210.2
Q ss_pred ceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.|++.+.||.|+||.||+|.+. .+|..||+|++...... .....+.+.+|+.+++++.+||||+.+++++..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 3889999999999999999874 47899999998654321 1224467889999999997799999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||+.|++||||||+|||++ .
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~---~ 140 (290)
T cd05613 81 HLILDYINGGELFTHLSQR-----------------ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD---S 140 (290)
T ss_pred EEEEecCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC---C
Confidence 9999999999998877432 5688999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCC--CccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCCh----hHH
Q 008127 253 DSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGI 323 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~----~~~ 323 (577)
++.+||+|||++....... ......|+..|+|||.+.+ .++.++||||||+++|+|++|..||..... .++
T Consensus 141 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~ 220 (290)
T cd05613 141 NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEI 220 (290)
T ss_pred CCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHH
Confidence 7899999999997654322 2234578999999998764 347789999999999999999999964322 333
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
...+....+.+ .+.+++.+.+++.+||..||.+|| ++.+++.||||...
T Consensus 221 ~~~~~~~~~~~----~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 221 SRRILKSEPPY----PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI 274 (290)
T ss_pred HHHhhccCCCC----CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence 33343333322 235788999999999999999997 89999999999875
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-40 Score=327.89 Aligned_cols=256 Identities=31% Similarity=0.564 Sum_probs=213.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|...+.||.|++|.||++.+..+++.+|+|.+.... ....+.+.+|+.+++.+ +||||+++++++...+..++|+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEEEE
Confidence 4555678999999999999999999999999885432 23445688999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+.. ..+++..+..++.||+.||.|||++||+||||+|+||+++ .++.+
T Consensus 96 e~~~~~~L~~~~~~------------------~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~ 154 (285)
T cd06648 96 EFLEGGALTDIVTH------------------TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT---SDGRV 154 (285)
T ss_pred eccCCCCHHHHHHh------------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc---CCCcE
Confidence 99999999876531 4578899999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++....... ......|++.|+|||.+.+. ++.++|||||||++|+|++|..||...+.......+....+..
T Consensus 155 ~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd06648 155 KLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPK 234 (285)
T ss_pred EEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCC
Confidence 999999887543221 22345789999999988654 5889999999999999999999998877766666665543222
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.. ....++..+.+||.+||..+|.+|||+.++++||||+....
T Consensus 235 ~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 235 LK-NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred Cc-ccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 11 12347889999999999999999999999999999988654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=346.40 Aligned_cols=249 Identities=32% Similarity=0.504 Sum_probs=211.8
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.+.|.+...+|.|+|+.|-.+.+..+++.+++|++.+... ...+|+.++....+||||+++.+++.+..+.
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~ 391 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEI 391 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCcee
Confidence 356789999999999999999999999999999999977621 2346777777777999999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||++.|+.|++.+..+ ..++ ..+..|+.+|+.|+.|||++|||||||||+|||++ +.
T Consensus 392 ~~v~e~l~g~ell~ri~~~-----------------~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~ 451 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSK-----------------PEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GS 451 (612)
T ss_pred eeeehhccccHHHHHHHhc-----------------chhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CC
Confidence 9999999999999877543 3333 77888999999999999999999999999999995 25
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh-HHHHHHHhC
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN 330 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~i~~~ 330 (577)
.++++|+|||.++..... ..+.+-|..|.|||++.. .++++|||||||++||+|++|+.||.....+ +++..+..+
T Consensus 452 ~g~lrltyFG~a~~~~~~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~ 529 (612)
T KOG0603|consen 452 AGHLRLTYFGFWSELERS--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMP 529 (612)
T ss_pred CCcEEEEEechhhhCchh--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCC
Confidence 789999999999887654 445577899999999875 5699999999999999999999999877665 444444333
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.. . ..+|..+++||..||+.||.+||++.+++.||||...
T Consensus 530 ~~--s----~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~ 569 (612)
T KOG0603|consen 530 KF--S----ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSH 569 (612)
T ss_pred cc--c----cccCHHHHHHHHHhccCChhhCcChhhhccCcchhcC
Confidence 22 1 4689999999999999999999999999999999433
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=325.28 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=208.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|.+.+.||.|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ .||||+++++++..++.+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCCcEEE
Confidence 35899999999999999999999999999999986543 2456788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++... ....+++..++.++.|++.||.|||++|++||||||+|||++ .++.
T Consensus 81 ~e~~~~~~L~~~~~~~---------------~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~---~~~~ 142 (263)
T cd05052 81 TEFMTYGNLLDYLREC---------------NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHL 142 (263)
T ss_pred EEeCCCCcHHHHHHhC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCc
Confidence 9999999999877432 234688899999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++......... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 143 ~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~ 222 (263)
T cd05052 143 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY 222 (263)
T ss_pred EEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC
Confidence 999999999876533211 12234668999998764 45889999999999999998 999998887777766665432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.......++.++.++|.+||..||.+|||+.++++
T Consensus 223 ---~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 223 ---RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred ---CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 12223567899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=331.55 Aligned_cols=261 Identities=28% Similarity=0.494 Sum_probs=214.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..+|.+.+.||.|+||.||++.+..++..||+|.+..... ...+.+.+|+.+++.+. ||||+++++++...+.+|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~l 93 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ---PKKELIINEILVMRENK-HPNIVNYLDSYLVGDELWV 93 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc---hHHHHHHHHHHHHhhcC-CCCeeehhheeeeCCcEEE
Confidence 3589999999999999999999988999999999864432 23567889999999994 9999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|+||+++++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+++ .++
T Consensus 94 v~e~~~~~~L~~~~~~------------------~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~---~~~ 152 (293)
T cd06647 94 VMEYLAGGSLTDVVTE------------------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDG 152 (293)
T ss_pred EEecCCCCcHHHHHhh------------------cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc---CCC
Confidence 9999999999886632 3578889999999999999999999999999999999998 477
Q ss_pred CeeEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++....... ......|++.|+|||.+.+ .++.++|||||||++|+|++|+.||...+.......+.....
T Consensus 153 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~ 232 (293)
T cd06647 153 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT 232 (293)
T ss_pred CEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC
Confidence 89999999887654332 2234578999999998764 458899999999999999999999977665444333322211
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~ 381 (577)
.....+..++..+.++|.+||..+|.+||++.+++.||||+.......
T Consensus 233 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~ 280 (293)
T cd06647 233 -PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSS 280 (293)
T ss_pred -CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCccccc
Confidence 111123456788999999999999999999999999999987654443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=326.88 Aligned_cols=250 Identities=34% Similarity=0.563 Sum_probs=212.3
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||.|+||.||+|.+..+|+.||+|.+.............+.+|+++++++. ||||+++++.+......|+||||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999999899999999987654433345678899999999995 9999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+.+... ..+++..+..++.||+.||.|||+.|++||||+|+||+++ .++.++|+|||+
T Consensus 80 L~~~l~~~-----------------~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~---~~~~~~l~dfg~ 139 (265)
T cd05579 80 LASLLENV-----------------GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID---SNGHLKLTDFGL 139 (265)
T ss_pred HHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc---CCCCEEEEeccc
Confidence 98876432 4789999999999999999999999999999999999998 478899999999
Q ss_pred CcccCCCC---------CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 264 SDFIKPGK---------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 264 a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+....... ......++..|+|||.+.. ..+.++||||||+++|+|++|..||......+....+..+...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd05579 140 SKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE 219 (265)
T ss_pred chhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC
Confidence 87543321 2234568889999998764 3578999999999999999999999888888777777664433
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCH---HHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTA---AQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~---~~il~hp~f~~~ 376 (577)
++. ...++..+.+++.+||+.+|.+|||+ .++|+||||+..
T Consensus 220 ~~~--~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 220 WPE--DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred CCc--cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 322 12348999999999999999999999 999999999853
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=337.86 Aligned_cols=263 Identities=25% Similarity=0.405 Sum_probs=210.2
Q ss_pred cccceee-eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchh-----------hHHHHHHHHHHHHHhcCCCCeeE
Q 008127 94 FDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI-----------AVEDVKREVKILQALAGHENVVK 161 (577)
Q Consensus 94 ~~~~y~~-~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~-----------~~~~~~~E~~~l~~l~~hpniv~ 161 (577)
+.++|.. .+.||.|+||.||+|.+..+++.||||.+......... ....+.+|+.+++.+ +||||++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~ 84 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIMG 84 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcceee
Confidence 4457764 57899999999999999999999999998654321100 112477899999999 5999999
Q ss_pred EEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCC
Q 008127 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 241 (577)
Q Consensus 162 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlK 241 (577)
+++++...+..|+||||+. |+|.+.+.. ...+++..+..++.||+.||.|||+.||+|||||
T Consensus 85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~-----------------~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~ 146 (335)
T PTZ00024 85 LVDVYVEGDFINLVMDIMA-SDLKKVVDR-----------------KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLS 146 (335)
T ss_pred eeEEEecCCcEEEEEeccc-cCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 9999999999999999996 588776632 3568999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCCeeEEecCCCcccCC---------------CCCccccccCCccccchhcccC--CCCCCchhhHHHH
Q 008127 242 PENFLFKSAKEDSSLKATDFGLSDFIKP---------------GKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVI 304 (577)
Q Consensus 242 p~NILl~~~~~~~~vkl~DFGla~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~i 304 (577)
|+||+++ .++.+||+|||++..... ........+++.|+|||.+.+. ++.++|||||||+
T Consensus 147 ~~nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~ 223 (335)
T PTZ00024 147 PANIFIN---SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCI 223 (335)
T ss_pred HHHeEEC---CCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHH
Confidence 9999998 478899999999876541 1112234578899999988653 4789999999999
Q ss_pred HHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC------------------------CCCCCCHHHHHHHHHccccCcCC
Q 008127 305 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK------------------------PWPSISNSAKDFVKKLLVKDPRA 360 (577)
Q Consensus 305 l~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~s~~~~~li~~~l~~dP~~ 360 (577)
+|+|++|.+||.+.+..+.+..+.......... ..+..+..+.++|.+||..+|++
T Consensus 224 l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 303 (335)
T PTZ00024 224 FAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLE 303 (335)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchh
Confidence 999999999998887766665554321111000 01345788999999999999999
Q ss_pred CCCHHHHhcCccccccCC
Q 008127 361 RLTAAQALSHPWVREGGD 378 (577)
Q Consensus 361 Rpt~~~il~hp~f~~~~~ 378 (577)
|||+.++|.||||+....
T Consensus 304 R~s~~~~l~~~~~~~~~~ 321 (335)
T PTZ00024 304 RISAKEALKHEYFKSDPL 321 (335)
T ss_pred ccCHHHHhcCcccCCCCC
Confidence 999999999999997654
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=332.23 Aligned_cols=260 Identities=27% Similarity=0.453 Sum_probs=216.4
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
...+.|...+.||+|+||.||+|++..+|..||+|.+.............+.+|+.+++.+ +|||++++++++..+...
T Consensus 22 ~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 100 (317)
T cd06635 22 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHTA 100 (317)
T ss_pred CchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCeE
Confidence 3445688999999999999999999999999999998765443344566788999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||++ |+|.+.+... ...+++..+..++.||+.||.|||+.||+||||+|+||+++ .
T Consensus 101 ~lv~e~~~-g~l~~~~~~~----------------~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~---~ 160 (317)
T cd06635 101 WLVMEYCL-GSASDLLEVH----------------KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---E 160 (317)
T ss_pred EEEEeCCC-CCHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC---C
Confidence 99999996 4777655322 35689999999999999999999999999999999999997 4
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
++.+||+|||++...... ....|++.|+|||.+. +..+.++|||||||++|+|++|..||...........+.
T Consensus 161 ~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~ 237 (317)
T cd06635 161 PGQVKLADFGSASIASPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA 237 (317)
T ss_pred CCCEEEecCCCccccCCc---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence 788999999998765432 3457899999999863 346889999999999999999999998877666666665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
..... ......+++.+.+||.+||..+|.+||++.++++|+|+.....
T Consensus 238 ~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 238 QNESP--TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred hccCC--CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 54322 1122456788999999999999999999999999999976543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=329.64 Aligned_cols=254 Identities=31% Similarity=0.501 Sum_probs=208.6
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEEEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVYIA 175 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~lv 175 (577)
|++.+.||.|+||.||+|.+..+|+.+|+|.+.... ........+.+|+.+++.+. |||++++++++... +..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEE
Confidence 678899999999999999999999999999987653 12234466889999999995 99999999999987 899999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++ +|.+.+... ...+++..++.++.||+.||.|||+.|++|+||||+||+++ .++.
T Consensus 79 ~e~~~~-~l~~~~~~~----------------~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~---~~~~ 138 (287)
T cd07840 79 FEYMDH-DLTGLLDSP----------------EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN---NDGV 138 (287)
T ss_pred eccccc-cHHHHHhcc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc---CCCC
Confidence 999974 777655321 25789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCC--CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++....... ......++..|+|||.+.+ .++.++||||||+++|+|++|+.||...+....+..+....
T Consensus 139 ~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~ 218 (287)
T cd07840 139 LKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELC 218 (287)
T ss_pred EEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 9999999998765432 2334567889999997754 35889999999999999999999998887766666554422
Q ss_pred CCCCCCCC--------------------------CC-CCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 332 PDFRRKPW--------------------------PS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 332 ~~~~~~~~--------------------------~~-~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.......| .. +++.+.++|.+||..+|.+||++.++++||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 219 GSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 11111111 12 27889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=330.12 Aligned_cols=255 Identities=29% Similarity=0.479 Sum_probs=206.3
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|++.+.||.|++|.||+|.++.+|..||+|++...... ......+.+|+.+++.+ +||||+++++++.+.+..|+|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED-EGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc-ccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEEEEe
Confidence 67788999999999999999999999999998754321 22345678899999999 49999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|++ ++|.+++... ....+++..++.++.||+.||.|||+++++||||+|+||+++. ++.++
T Consensus 79 ~~~-~~l~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~---~~~~~ 139 (283)
T cd07835 79 FLD-LDLKKYMDSS---------------PLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR---EGALK 139 (283)
T ss_pred ccC-cCHHHHHhhC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC---CCcEE
Confidence 995 6887766432 1246899999999999999999999999999999999999984 78899
Q ss_pred EEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC--
Q 008127 258 ATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP-- 332 (577)
Q Consensus 258 l~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~-- 332 (577)
|+|||++...... .......+++.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+.....
T Consensus 140 l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 219 (283)
T cd07835 140 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTP 219 (283)
T ss_pred EeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9999999765322 222334678999999987643 47889999999999999999999987665444443332110
Q ss_pred -------------------CC----CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 -------------------DF----RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 -------------------~~----~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.. .....+.++..+.++|.+||+.+|.+|||+.+++.||||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 220 DEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred ChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00 011134577899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-41 Score=340.97 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=210.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCC---E-EEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGD---R-VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~-vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+-.+.++||+|+||.||+|..+..+. . ||||..............++.+|.++|+.| +|||||++||+......+
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCcc
Confidence 45567899999999999998766432 3 899988754434566889999999999999 699999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
+||||+|.||+|.++|... ...++..+...++.+++.||+|||++++|||||-.+|+|++ .
T Consensus 237 ~ivmEl~~gGsL~~~L~k~----------------~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~---~ 297 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKN----------------KKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS---K 297 (474)
T ss_pred EEEEEecCCCcHHHHHHhC----------------CCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec---C
Confidence 9999999999999988654 23689999999999999999999999999999999999998 3
Q ss_pred CCCeeEEecCCCcccCCCCCcccc-ccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDI-VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~-~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
+..+||+|||+++........... .-...|+|||.+. +-+++++|||||||++||+++ |..||.+....++...|..
T Consensus 298 ~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~ 377 (474)
T KOG0194|consen 298 KGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVK 377 (474)
T ss_pred CCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHh
Confidence 567899999999865421111111 2446899999886 456899999999999999999 8999999999999999966
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.....+.+ ...+.++..++.+||..+|++|||+.++.+
T Consensus 378 ~~~r~~~~--~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 378 NGYRMPIP--SKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred cCccCCCC--CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 55443332 356788999999999999999999999866
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=326.43 Aligned_cols=254 Identities=28% Similarity=0.469 Sum_probs=208.2
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+..+|+.||||.+.............+.+|+.+++.+ +||||+++++++..++.+++||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEEEEE
Confidence 688999999999999999999999999999988765443344567889999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+... ......+++..++.++.||+.||.|||++|++|+||||+||+++ .++.+
T Consensus 82 e~~~~~~L~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~ 145 (267)
T cd08229 82 ELADAGDLSRMIKHF-------------KKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVV 145 (267)
T ss_pred EecCCCCHHHHHHHh-------------hccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCE
Confidence 999999998876432 11235689999999999999999999999999999999999998 47789
Q ss_pred eEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~--~~~~~~i~~~~~ 332 (577)
+|+|||++........ .....|+..|+|||++.+ .++.++||||||+++|+|++|..||.+... ......+...
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-- 223 (267)
T cd08229 146 KLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-- 223 (267)
T ss_pred EECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC--
Confidence 9999999876643322 234578999999998865 457889999999999999999999976543 2333333322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.++...+..+++.+.++|.+||..||.+|||+.++++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 224 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 2222233457889999999999999999999997764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=322.32 Aligned_cols=245 Identities=24% Similarity=0.389 Sum_probs=204.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||+|+||.||+|.++ ++..+|+|.+..... ....+.+|+.+++.+ +||||+++++++...+.+++||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEEEEE
Confidence 5889999999999999999865 456899998765432 345688999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+... ...+++..+..++.|++.||.|||++||+||||||+||+++ .++.+
T Consensus 79 e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~ 139 (256)
T cd05114 79 EFMENGCLLNYLRQR----------------QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---STGVV 139 (256)
T ss_pred EcCCCCcHHHHHHhC----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---CCCeE
Confidence 999999998876432 24578899999999999999999999999999999999998 47789
Q ss_pred eEEecCCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
||+|||++......... ....++..|+|||++.+ .++.++||||||+++|+|++ |+.||...+..+....+..+..
T Consensus 140 kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~ 219 (256)
T cd05114 140 KVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFR 219 (256)
T ss_pred EECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC
Confidence 99999999865432221 12345668999998864 45889999999999999999 9999988888878777766543
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... ....+..+.+++.+||..+|.+|||+.++++
T Consensus 220 ~~~---~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 220 LYR---PKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CCC---CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 221 1336788999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=337.31 Aligned_cols=259 Identities=31% Similarity=0.508 Sum_probs=210.8
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 170 (577)
+.++|++.+.||+|+||.||+|.+..+|..||||++.... ........+.+|+.+++.+ +||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCcccc
Confidence 4568999999999999999999999999999999986432 1233456688999999999 5999999999987653
Q ss_pred ---eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 171 ---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
.+++||||+ +++|.+.+. ...+++..++.++.||+.||.|||+.||+||||||+||++
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~------------------~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill 151 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMK------------------HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV 151 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 468999999 778766442 2568999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+ .++.+||+|||++..... ......+++.|+|||++.+ .++.++|+|||||++|+|++|..||.+......+.
T Consensus 152 ~---~~~~~kl~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~ 226 (343)
T cd07880 152 N---EDCELKILDFGLARQTDS--EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLM 226 (343)
T ss_pred c---CCCCEEEeeccccccccc--CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 8 478899999999986543 2234578999999998764 35788999999999999999999998776555444
Q ss_pred HHHhCCCC-----------------------CC----CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKPD-----------------------FR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~~-----------------------~~----~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.++..... +. ...++.+++.+.++|.+||..||.+|||+.+++.||||+....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 227 EIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred HHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 44331111 10 0113467888999999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-40 Score=327.12 Aligned_cols=256 Identities=28% Similarity=0.432 Sum_probs=207.8
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEcCCe----
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNY---- 171 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~---- 171 (577)
|++.+.||.|+||.||+|.++.+++.||+|.+...... ......+.+|+.+++++. +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE-EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc-chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 67889999999999999999888999999998654321 222345677888887774 59999999999987766
Q ss_pred -EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 172 -VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 172 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
++++|||+. ++|.+++... ....+++..++.++.||+.||.|||+.+++|+||+|+||+++.
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~---------------~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~- 142 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKC---------------PKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS- 142 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHc---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc-
Confidence 999999996 4787766432 1235899999999999999999999999999999999999984
Q ss_pred CCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 251 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
++.+||+|||++.............++..|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+..
T Consensus 143 --~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~ 220 (287)
T cd07838 143 --DGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFD 220 (287)
T ss_pred --CCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHH
Confidence 68999999999987654444445568899999998765 458899999999999999999999988887777666654
Q ss_pred CCCC----------------CC-------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 330 NKPD----------------FR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 330 ~~~~----------------~~-------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.... +. ....+.+++.+.++|.+||..||.+||++.+++.||||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 221 VIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred HcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 2110 00 00112456788999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=329.83 Aligned_cols=258 Identities=28% Similarity=0.450 Sum_probs=213.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
..+.|...+.||+|+||.||+|++..+|..||+|.+.............+.+|+.+++.+ +|||++++++++.+....|
T Consensus 19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 97 (313)
T cd06633 19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTAW 97 (313)
T ss_pred HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEE
Confidence 334577888899999999999999999999999998765443344556788999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+. |+|.+.+.. ....+++..++.++.||+.||.|||++||+||||+|+||+++ .+
T Consensus 98 lv~e~~~-~~l~~~l~~----------------~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~---~~ 157 (313)
T cd06633 98 LVMEYCL-GSASDLLEV----------------HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EP 157 (313)
T ss_pred EEEecCC-CCHHHHHHh----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC---CC
Confidence 9999995 577765532 235688999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
+.+||+|||++..... .....|+..|+|||++. +.++.++|||||||++|+|++|..||...........+..
T Consensus 158 ~~~kL~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~ 234 (313)
T cd06633 158 GQVKLADFGSASKSSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 234 (313)
T ss_pred CCEEEeecCCCcccCC---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Confidence 7899999999865432 23457899999999874 3457889999999999999999999988776665555544
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
... +....+.++..+.+|+.+||+.+|.+||++.+++.||||+...
T Consensus 235 ~~~--~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 235 NDS--PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred cCC--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 322 2222345678899999999999999999999999999999743
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=337.48 Aligned_cols=268 Identities=24% Similarity=0.278 Sum_probs=205.2
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-C
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-D 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 169 (577)
++|++.+.||.|+||.||+|.+. .+++.||+|++..... ......+.+|+.++.++.+||||+++++++.. +
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 57999999999999999999743 3457899998864321 23456678899999999669999999998764 5
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhH--------------------------------------------HHhh
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAW--------------------------------------------FLAI 205 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~--------------------------------------------~~~~ 205 (577)
..++++|||+++|+|.+.+............. ....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 67899999999999998886432100000000 0000
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCcc
Q 008127 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYY 282 (577)
Q Consensus 206 ~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y 282 (577)
.....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..+..... .....++..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 1124789999999999999999999999999999999999998 477899999999987543221 1234567789
Q ss_pred ccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCC
Q 008127 283 VAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 360 (577)
Q Consensus 283 ~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~ 360 (577)
+|||++.+ .++.++|||||||++|+|++ |..||.+....+.+...+....... .....++++.+++.+||+.+|++
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~ 319 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMR--APEYATPEIYSIMLDCWHNNPED 319 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCC--CCccCCHHHHHHHHHHccCChhh
Confidence 99997754 56889999999999999998 9999987655555544444322211 12356789999999999999999
Q ss_pred CCCHHHHhcC
Q 008127 361 RLTAAQALSH 370 (577)
Q Consensus 361 Rpt~~~il~h 370 (577)
||++.++++|
T Consensus 320 RPs~~ell~~ 329 (337)
T cd05054 320 RPTFSELVEI 329 (337)
T ss_pred CcCHHHHHHH
Confidence 9999999874
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=329.50 Aligned_cols=260 Identities=25% Similarity=0.359 Sum_probs=209.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|++.+.||.|+||.||+|.+..+++.||||.+..... ......+..|+.++..+.+||||+++++++.....+|+|
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 468999999999999999999998899999999875432 223456677888777776799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||++ ++|.+.+.. ....+++..+..++.||+.||.|||+ .||+||||+|+||+++ .++
T Consensus 93 ~e~~~-~~l~~l~~~----------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~---~~~ 152 (296)
T cd06618 93 MELMS-TCLDKLLKR----------------IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD---ASG 152 (296)
T ss_pred eeccC-cCHHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc---CCC
Confidence 99985 456554322 13578999999999999999999997 6999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccC-----CCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVL 328 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~ 328 (577)
.+||+|||++..+..........+++.|+|||.+.+. ++.++||||||+++|+|++|+.||..... .+.+..++
T Consensus 153 ~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 232 (296)
T cd06618 153 NVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKIL 232 (296)
T ss_pred CEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHh
Confidence 9999999999876544433445688899999988643 57899999999999999999999976432 34455554
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
....... .....++.++.+|+.+||..||.+||++.+++.||||+....
T Consensus 233 ~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 233 QEEPPSL-PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred cCCCCCC-CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence 4432211 111247889999999999999999999999999999987543
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-40 Score=322.36 Aligned_cols=247 Identities=23% Similarity=0.371 Sum_probs=206.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.++||.|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.+++.+ +||||+++++++...+..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEEE
Confidence 47999999999999999999864 56789999876543 2356789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ....++...+..++.|++.||.|||+.+++||||||+||+++ .++.
T Consensus 80 ~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~---~~~~ 141 (261)
T cd05072 80 TEYMAKGSLLDFLKSD---------------EGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLM 141 (261)
T ss_pred EecCCCCcHHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec---CCCc
Confidence 9999999999877543 235678889999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++........ .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+....
T Consensus 142 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~ 221 (261)
T cd05072 142 CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY 221 (261)
T ss_pred EEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC
Confidence 99999999987643221 123346678999998764 45889999999999999998 999998877777666665442
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+....++.++.+++.+||..+|++|||++++++
T Consensus 222 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 222 ---RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred ---CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 22233567899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=329.88 Aligned_cols=266 Identities=23% Similarity=0.286 Sum_probs=207.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC--EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~--~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
++|++.+.||+|+||.||+|.+..++. .+|+|.+.... .....+.+.+|+.++.++.+||||+++++++...+.+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 469999999999999999999877765 46888775321 23345678999999999966999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+++|+|.+++.......... .+.........+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~ 155 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDP-AFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG---EN 155 (297)
T ss_pred EEEEecCCCcHHHHHHhcccccccc-ccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC---CC
Confidence 9999999999999886532111000 0000001124588999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+.+||+|||++..............+..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~ 235 (297)
T cd05089 156 LASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 235 (297)
T ss_pred CeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence 8899999999864322111112233557999998765 45889999999999999997 999999888877777665532
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
. ......++..+.+|+.+||..+|.+|||+.++++.
T Consensus 236 ~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 236 R---MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred C---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1 12224578999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=320.79 Aligned_cols=254 Identities=28% Similarity=0.495 Sum_probs=209.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccc--cCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--Ce
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK--MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~ 171 (577)
.+|++.+.||+|+||.||+|.+..+|+.||+|.+.... .........+.+|+.+++++ +||||+++++++.+. +.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCE
Confidence 36999999999999999999999999999999875321 11234567889999999999 599999999998753 56
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+++|+||+++++|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||+++
T Consensus 81 ~~~v~e~~~~~~L~~~~~~~-----------------~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~--- 140 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKAY-----------------GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD--- 140 (264)
T ss_pred EEEEEEeCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---
Confidence 89999999999998876432 5578999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCC----CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
.++.++|+|||++...... .......|+..|+|||++.+. .+.++|||||||++|+|++|+.||..........+
T Consensus 141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 220 (264)
T cd06653 141 SAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFK 220 (264)
T ss_pred CCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 4778999999999765321 122345789999999988654 58899999999999999999999987765555555
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
+..... ....++.+++.+.++|.+||. +|..|||+.+++.|||.
T Consensus 221 ~~~~~~--~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 221 IATQPT--KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHcCCC--CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 443221 122235688999999999999 58999999999999994
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=337.08 Aligned_cols=256 Identities=19% Similarity=0.300 Sum_probs=201.7
Q ss_pred eeeccc--CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEecc
Q 008127 102 KLLGHG--QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (577)
Q Consensus 102 ~~lG~G--~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 179 (577)
..||.| +||+||+|.+..+|+.||+|++...... ....+.+.+|+.+++.+ +||||++++++|...+.+|+|+||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-EEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEEecc
Confidence 356666 9999999999999999999998754332 33457889999999888 5999999999999999999999999
Q ss_pred CCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEE
Q 008127 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259 (577)
Q Consensus 180 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~ 259 (577)
.+++|.+.+... ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.++++
T Consensus 82 ~~~~l~~~l~~~---------------~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~ 143 (328)
T cd08226 82 AYGSANSLLKTY---------------FPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLS 143 (328)
T ss_pred cCCCHHHHHHhh---------------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEe
Confidence 999998876443 124588999999999999999999999999999999999998 46789999
Q ss_pred ecCCCcccCCCCC--------ccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 260 DFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 260 DFGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
|||.+........ .....++..|+|||++.+. ++.++|||||||++|+|++|+.||.+..........+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~ 223 (328)
T cd08226 144 GLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKL 223 (328)
T ss_pred chHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHh
Confidence 9986533211100 0112356779999998653 5789999999999999999999998766555444443
Q ss_pred hCCCCCC-------------------------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCHH
Q 008127 329 RNKPDFR-------------------------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAA 365 (577)
Q Consensus 329 ~~~~~~~-------------------------------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~ 365 (577)
...+..+ ......+++.+.+||.+||+.||++|||+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~ 303 (328)
T cd08226 224 KGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSAS 303 (328)
T ss_pred cCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHH
Confidence 3221100 000123566799999999999999999999
Q ss_pred HHhcCccccccC
Q 008127 366 QALSHPWVREGG 377 (577)
Q Consensus 366 ~il~hp~f~~~~ 377 (577)
++|+||||+...
T Consensus 304 e~l~~~~~~~~~ 315 (328)
T cd08226 304 SLLSHAFFKQVK 315 (328)
T ss_pred HHhhCHHHHHHH
Confidence 999999998654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=328.13 Aligned_cols=262 Identities=22% Similarity=0.319 Sum_probs=211.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|.+.+.||+|+||.||+|.+.. +++.||||.+..... ......+.+|+++++.+ .||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNF-QHENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhc-CCCCchheeeEEecCC
Confidence 468899999999999999998743 467899999865432 23457899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++||||+++++|.+++.......... .........+++..+..++.||+.||.|||++|++||||||+||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~-- 156 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFL---KSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG-- 156 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhh---cccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc--
Confidence 9999999999999999886542110000 00112345688999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+...
T Consensus 157 -~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~ 235 (280)
T cd05049 157 -YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE 235 (280)
T ss_pred -CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 478999999999976533221 123356788999998765 45889999999999999998 999998888877777
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..+..... ...++..+.+++.+||..||.+|||+.++++
T Consensus 236 ~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 236 CITQGRLLQR---PRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHcCCcCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 7765543222 2457899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=326.25 Aligned_cols=266 Identities=20% Similarity=0.282 Sum_probs=210.6
Q ss_pred ccceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|++.+.||+|+||.||+|.++. .+..||+|.+..... ......+.+|+.+++.+ +||||+++++++...
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~ 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS--LRERIEFLNEASVMKGF-TCHHVVRLLGVVSKG 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC--HHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence 3579999999999999999997652 355899998764432 22345678899999999 599999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+..|+||||+++|+|.+++........ .......++...+..++.||+.||.|||+++|+||||||+|||++
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~- 153 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAE-------NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA- 153 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccc-------cCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc-
Confidence 999999999999999998864311000 001124467788899999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||+++....... .....++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+..
T Consensus 154 --~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~ 231 (288)
T cd05061 154 --HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 231 (288)
T ss_pred --CCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 478899999999876533221 112345678999998764 46889999999999999998 78999887777766
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc------Ccccccc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS------HPWVREG 376 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~------hp~f~~~ 376 (577)
..+..+.... ....+++.+.+++.+||+.||++|||+.++++ ||||+..
T Consensus 232 ~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 232 KFVMDGGYLD---QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHcCCCCC---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 6665442211 12356789999999999999999999999987 9999764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=326.58 Aligned_cols=266 Identities=18% Similarity=0.261 Sum_probs=208.5
Q ss_pred cceeeeeeecccCCeEEEEEEEc----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
..|++.+.||+|+||.||+|.+. .++..||+|.+.... .......+.+|+.+++.+ +||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQEQP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecCCc
Confidence 35899999999999999999853 456789999986432 233456788999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.|+||||+++++|.+++......................+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~--- 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG--- 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc---
Confidence 99999999999999987543211100000000001124578899999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCC---CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||++....... ......++..|+|||++.+ .++.++|||||||++|+|++ |..||.+.....+...
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 46789999999997654322 1233456778999998764 46889999999999999998 9999988777666665
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+..... . ..+..+++.+.+++.+||+.||.+||++.+++++
T Consensus 239 ~~~~~~-~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 239 VRKRQL-L--PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHcCCc-C--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 554332 1 2234678999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=338.80 Aligned_cols=260 Identities=30% Similarity=0.501 Sum_probs=212.8
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe--
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY-- 171 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~-- 171 (577)
+.++|++.+.||.|+||.||+|++..+++.||||++..... .......+.+|+.+++.+ .||||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-SAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSLE 90 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc-hhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhcccccc
Confidence 45689999999999999999999999999999998865322 123446678899999999 59999999988876554
Q ss_pred ----EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 172 ----VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 172 ----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
+|+|+||+ +++|.+.+. ...+++..++.++.||+.||.|||+.||+||||||+||++
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~------------------~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill 151 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVK------------------CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV 151 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE
Confidence 89999999 678877552 2568999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+ .++.+||+|||++...... .....+|..|+|||.+.+ .++.++|||||||++|+|++|+.||.+....+.+.
T Consensus 152 ~---~~~~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~ 226 (343)
T cd07851 152 N---EDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLK 226 (343)
T ss_pred C---CCCCEEEcccccccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 8 4788999999999865432 345578999999998754 45789999999999999999999998777666655
Q ss_pred HHHhCCCCC-----------------------CC----CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKPDF-----------------------RR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~~~-----------------------~~----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.++...... .. ..+..+++.+.+||.+||..+|.+|||+.++++||||+....
T Consensus 227 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~ 306 (343)
T cd07851 227 RIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHD 306 (343)
T ss_pred HHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCC
Confidence 554321110 00 011346889999999999999999999999999999997654
Q ss_pred C
Q 008127 379 A 379 (577)
Q Consensus 379 ~ 379 (577)
.
T Consensus 307 ~ 307 (343)
T cd07851 307 P 307 (343)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=314.73 Aligned_cols=261 Identities=28% Similarity=0.466 Sum_probs=212.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-------
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------- 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------- 168 (577)
..|+-..+||+|.||+||+|+.+.+|+.||+|++-..... .-......+|+.+|..|. |+|++.+++.|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK-eGfpitalreikiL~~lk-Henv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK-EGFPITALREIKILQLLK-HENVVNLIEICRTKATPTNR 94 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc-cCCcHHHHHHHHHHHHhc-chhHHHHHHHHhhccCCccc
Confidence 3678888999999999999999999999999876432211 112344578999999995 9999999988742
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
...+|+|+.+|+. +|...|.. ...+++..++..++.+++.||.|+|...|+|||+||+|+|+
T Consensus 95 ~r~t~ylVf~~ceh-DLaGlLsn----------------~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI 157 (376)
T KOG0669|consen 95 DRATFYLVFDFCEH-DLAGLLSN----------------RKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI 157 (376)
T ss_pred ccceeeeeHHHhhh-hHHHHhcC----------------ccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE
Confidence 3469999999964 66654421 23679999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCC-----CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||+|+.+... ..+...+-|.+|++||.+.| .++++.|||+.|||+.||.||.+.+.+.++
T Consensus 158 t---~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte 234 (376)
T KOG0669|consen 158 T---KDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE 234 (376)
T ss_pred c---CCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH
Confidence 8 5899999999999765322 33566788999999998765 579999999999999999999999999998
Q ss_pred hHHHHHHHhCCCCCCCCCCCCC-------------------------------CHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSI-------------------------------SNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~-------------------------------s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+..|..-...+....||++ .+++.+|+.+||..||.+||+++++|.
T Consensus 235 qqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 235 QQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred HHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 8877766544444444444431 236789999999999999999999999
Q ss_pred CccccccCC
Q 008127 370 HPWVREGGD 378 (577)
Q Consensus 370 hp~f~~~~~ 378 (577)
|.||.....
T Consensus 315 h~~F~kdp~ 323 (376)
T KOG0669|consen 315 HDFFWKDPM 323 (376)
T ss_pred hhhhhcCCc
Confidence 999987653
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=326.31 Aligned_cols=260 Identities=23% Similarity=0.349 Sum_probs=208.6
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
..|.+.+.||.|+||.||++.+. .++..+|+|.+.... ......+.+|+.+++++ +||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNL-QHEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Confidence 46899999999999999999852 345679999886542 33566789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+++||||+++++|.+++......... .........+++..++.++.||+.||.|||++|++||||||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~-- 154 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVL----MAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG-- 154 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCcccc----ccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc--
Confidence 999999999999999887543111000 00011224589999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||......+...
T Consensus 155 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~ 233 (288)
T cd05093 155 -ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE 233 (288)
T ss_pred -cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 478899999999986543221 123345778999998875 45889999999999999998 999998888777777
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..+.... ....+++++.+|+.+||+.||.+|||+.+++.
T Consensus 234 ~i~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 234 CITQGRVLQ---RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred HHHcCCcCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 776654321 12357889999999999999999999999854
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=318.58 Aligned_cols=256 Identities=30% Similarity=0.533 Sum_probs=218.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||.|+||.||++.+..++..||+|++..... .......+.+|+++++.+. |||++++++.+...+..++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEEEEE
Confidence 48899999999999999999999999999999876543 2345677889999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++.... .....+++..+..++.+++.||.|||++|++|+||+|+||+++ .++.+
T Consensus 79 e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~---~~~~~ 142 (258)
T cd08215 79 EYADGGDLSQKIKKQK-------------KEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT---SNGLV 142 (258)
T ss_pred EecCCCcHHHHHHHhh-------------ccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc---CCCcE
Confidence 9999999998775431 1246789999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++....... ......|++.|+|||.+.+. ++.++|+||+|+++|+|++|..||......+............
T Consensus 143 ~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 222 (258)
T cd08215 143 KLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPP 222 (258)
T ss_pred EECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCC
Confidence 999999997664432 23345789999999987654 5889999999999999999999998887777776665543221
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
....++..+.+++.+||..+|.+|||+.++|+||||
T Consensus 223 ---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 223 ---IPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 123578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-40 Score=360.81 Aligned_cols=149 Identities=31% Similarity=0.495 Sum_probs=133.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|.++++||.|+||.||+|.+..+++.||||++.............+..|+.++..+ +||||+++++++...+.+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEEEE
Confidence 4799999999999999999999999999999999766554455567889999999988 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++|++|.+++.. ...+++..++.++.||+.||.|||.++||||||||+|||++ .++.
T Consensus 83 mEy~~g~~L~~li~~-----------------~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~ 142 (669)
T cd05610 83 MEYLIGGDVKSLLHI-----------------YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS---NEGH 142 (669)
T ss_pred EeCCCCCCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc---CCCC
Confidence 999999999887643 25688899999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCc
Q 008127 256 LKATDFGLSD 265 (577)
Q Consensus 256 vkl~DFGla~ 265 (577)
+||+|||+++
T Consensus 143 vkL~DFGls~ 152 (669)
T cd05610 143 IKLTDFGLSK 152 (669)
T ss_pred EEEEeCCCCc
Confidence 9999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-40 Score=324.97 Aligned_cols=260 Identities=19% Similarity=0.287 Sum_probs=206.6
Q ss_pred ccceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|++.+.||+|+||.||+|.+. .++..||||.+..... ......+.+|+.+++.+ +||||+++++++...
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~ 81 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS--MRERIEFLNEASVMKEF-NCHHVVRLLGVVSQG 81 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence 457999999999999999999864 2456899998854321 23456688999999999 599999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+..++||||+++|+|.+++........ .......++...+..++.|++.||.|||+.|++||||||+|||++
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~- 153 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEME-------NNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA- 153 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCcccc-------ccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc-
Confidence 999999999999999988754310000 000123467888999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||++......... ....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+..
T Consensus 154 --~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~ 231 (277)
T cd05062 154 --EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVL 231 (277)
T ss_pred --CCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 4788999999998765432221 12345788999998765 45889999999999999999 78999888777776
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..+....... ....++..+.+++.+||+.||.+|||+.+++++
T Consensus 232 ~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 232 RFVMEGGLLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHHcCCcCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 6665543221 124577899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=320.42 Aligned_cols=255 Identities=27% Similarity=0.467 Sum_probs=209.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..+|+.||+|.+...........+.+.+|+.+++++ +||||+++++++...+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEEE
Confidence 4799999999999999999999999999999998754444444567899999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ......+++..++.++.||+.||.|||+.||+||||+|+||+++ .++.
T Consensus 81 ~e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~---~~~~ 144 (267)
T cd08224 81 LELADAGDLSRMIKHF-------------KKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT---ATGV 144 (267)
T ss_pred EecCCCCCHHHHHHHh-------------cccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC---CCCc
Confidence 9999999998876432 11235689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~--~~~~~~i~~~~ 331 (577)
++|+|||++....... ......|++.|+|||.+.+ .++.++|||||||++|+|++|+.||..... ......+..+.
T Consensus 145 ~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 224 (267)
T cd08224 145 VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCD 224 (267)
T ss_pred EEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCC
Confidence 9999999987654322 1234578999999998765 468899999999999999999999965432 23333333322
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+...+.+.++..+.++|.+||..+|.+|||+.++++
T Consensus 225 --~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 225 --YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred --CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 122222357789999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=332.12 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=202.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCE----EEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~----vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.+|++.+.||+|+||.||+|.+..++.. ||+|.+.... .......+.+|+.+++.+ +||||+++++++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCC-C
Confidence 3699999999999999999998766654 8999886432 234567788999999999 599999999998765 4
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++|+||+++|+|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~--- 143 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREH----------------KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK--- 143 (316)
T ss_pred ceeeeecCCCCCHHHHHHhc----------------cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---
Confidence 77999999999999877543 24578889999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+++........ ....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+.. .
T Consensus 144 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-~ 222 (316)
T cd05108 144 TPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-S 222 (316)
T ss_pred CCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-H
Confidence 4778999999999876543321 22334678999998764 46889999999999999997 99999876655543 4
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
++......+. .+.++..+.+++.+||..+|.+|||+.+++.+
T Consensus 223 ~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 223 ILEKGERLPQ--PPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred HHhCCCCCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 4443333222 24577899999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=329.87 Aligned_cols=258 Identities=28% Similarity=0.450 Sum_probs=213.3
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
....|...+.||.|+||.||+|+++.++..||+|.+.............+.+|+.+++.+ +|||++++++++......|
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 91 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAW 91 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCeeE
Confidence 445688899999999999999999999999999998654333334456788999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+. |+|.+.+.. ....+++..++.++.|++.||.|||+.+++||||||+|||++ .+
T Consensus 92 lv~e~~~-~~l~~~~~~----------------~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~---~~ 151 (308)
T cd06634 92 LVMEYCL-GSASDLLEV----------------HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EP 151 (308)
T ss_pred EEEEccC-CCHHHHHHH----------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC---CC
Confidence 9999996 577765532 235688999999999999999999999999999999999998 46
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
+.+||+|||++...... ....|++.|+|||.+. +..+.++|||||||++|+|++|..||......+....+..
T Consensus 152 ~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 228 (308)
T cd06634 152 GLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228 (308)
T ss_pred CcEEECCcccceeecCc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh
Confidence 88999999998765432 2456889999999874 3457899999999999999999999987766555555544
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
... +......++..+.+||.+||..+|.+||++.++++|||+....
T Consensus 229 ~~~--~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 229 NES--PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred cCC--CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 322 1111235778899999999999999999999999999998753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=337.54 Aligned_cols=260 Identities=32% Similarity=0.483 Sum_probs=214.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----e
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-----Y 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~ 171 (577)
+|++.+.||.|+||.||+|++..+|+.||||.+..... .....+.+.+|+.+++.+ +||||+++++++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccc
Confidence 58999999999999999999998999999999865421 133456788999999999 5999999999988765 7
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+||||++ ++|.+.+. ....+++..++.++.||+.||.|||+.||+||||||+|||++
T Consensus 79 ~~lv~e~~~-~~l~~~l~-----------------~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~--- 137 (330)
T cd07834 79 VYIVTELME-TDLHKVIK-----------------SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN--- 137 (330)
T ss_pred eEEEecchh-hhHHHHHh-----------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---
Confidence 999999997 46766553 235789999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCC----CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
.++.++|+|||++....... ......+|+.|+|||++.+. ++.++|||||||++|+|++|.+||.+.+..+.+.
T Consensus 138 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~ 217 (330)
T cd07834 138 SNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLN 217 (330)
T ss_pred CCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHH
Confidence 46899999999998765432 23455789999999988654 5889999999999999999999998887776666
Q ss_pred HHHhCCCCCCCC---------------------------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKPDFRRK---------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~~~~~~---------------------------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+.......... ..+.++..+.+||.+||+++|.+|||+.+++.||||+....
T Consensus 218 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 218 LIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred HHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 655422111100 12346788999999999999999999999999999987554
Q ss_pred C
Q 008127 379 A 379 (577)
Q Consensus 379 ~ 379 (577)
.
T Consensus 298 ~ 298 (330)
T cd07834 298 P 298 (330)
T ss_pred c
Confidence 3
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=317.60 Aligned_cols=253 Identities=32% Similarity=0.545 Sum_probs=212.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~l 174 (577)
+|.+.+.||+|++|.||+|.+..+++.|++|++...... ....+.+.+|+.+++++. ||||+++++.+... ..+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEE
Confidence 478889999999999999999989999999998765432 345778999999999995 99999999999988 89999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|+||+++++|.+++... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++
T Consensus 79 v~e~~~~~~L~~~~~~~-----------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~---~~ 138 (260)
T cd06606 79 FLEYVSGGSLSSLLKKF-----------------GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS---DG 138 (260)
T ss_pred EEEecCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC---CC
Confidence 99999999998876432 47899999999999999999999999999999999999984 78
Q ss_pred CeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCC-hhHHHHHHHh
Q 008127 255 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLR 329 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~-~~~~~~~i~~ 329 (577)
.++|+|||.+........ .....++..|+|||.+.+. .+.++||||||+++|+|++|..||.... .......+..
T Consensus 139 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 218 (260)
T cd06606 139 VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS 218 (260)
T ss_pred CEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc
Confidence 899999999987655442 3456789999999988755 6889999999999999999999997765 2222222322
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.. . .......++..+.+||.+||..+|.+||++.+++.||||
T Consensus 219 ~~-~-~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 219 SG-E-PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred cC-C-CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 11 1 112224568899999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=327.61 Aligned_cols=252 Identities=26% Similarity=0.342 Sum_probs=205.9
Q ss_pred cceeeeeeecccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|.+.+.||+|+||.||+|.+ ..++..||||.+..... ....+.+.+|+.+++++.+||||+++++++...+
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 4799999999999999999975 23456899998865432 3345678999999999966999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+||||+++|+|.+++... ....+++..+..++.||+.||.|||+++|+|+||||+|||++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~---------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~-- 175 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRK---------------RESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT-- 175 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc--
Confidence 999999999999999877432 123489999999999999999999999999999999999997
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+.+.
T Consensus 176 -~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~ 254 (302)
T cd05055 176 -HGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFY 254 (302)
T ss_pred -CCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHH
Confidence 477899999999986543221 122346788999998764 45889999999999999998 999998877665555
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
......... ......++.+.+|+.+||..+|++|||+.++++
T Consensus 255 ~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 255 KLIKEGYRM--AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HHHHcCCcC--CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 554433221 222457889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=336.16 Aligned_cols=258 Identities=33% Similarity=0.522 Sum_probs=207.8
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC-----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD----- 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----- 169 (577)
..+|.+.+.||+|+||.||+|.+..+|+.||||.+.+... .......+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 91 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSGDE 91 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhc-CCCCccchhheecccccCCC
Confidence 3579999999999999999999999999999999865422 122345678999999999 599999999998754
Q ss_pred -CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 -NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
..+|+|+||+. .+|...+ ...+++..+..++.|++.||.|||+.||+||||||+|||++
T Consensus 92 ~~~~~lv~e~~~-~~l~~~~-------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~ 151 (342)
T cd07879 92 FQDFYLVMPYMQ-TDLQKIM-------------------GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN 151 (342)
T ss_pred CceEEEEecccc-cCHHHHH-------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 35699999985 3554322 24688999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||++..... ......+|+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..
T Consensus 152 ---~~~~~kL~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~ 226 (342)
T cd07879 152 ---EDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ 226 (342)
T ss_pred ---CCCCEEEeeCCCCcCCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 478899999999876532 2334578999999998764 358899999999999999999999988765555544
Q ss_pred HHhCC-----------------------CCCCCC----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 327 VLRNK-----------------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 327 i~~~~-----------------------~~~~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
++... +..+.. .++..++.+.+||.+||+.||.+||++.+++.||||+.....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 227 ILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred HHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 43311 111111 124577889999999999999999999999999999987554
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=325.00 Aligned_cols=261 Identities=33% Similarity=0.533 Sum_probs=218.3
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+..+.|++.+.||.|+||.||+|.+..++..||+|++..... ....+.+|+++++.+ +||||+++++++...+..
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~ 90 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDC-KHPNIVDYYDSYLVGDEL 90 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCEE
Confidence 345579999999999999999999998999999999875432 456788999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|+||+++++|.+++... ...++...+..++.|++.||.|||+.||+|+||+|+||+++ .
T Consensus 91 ~lv~e~~~~~~L~~~l~~~----------------~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~---~ 151 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQN----------------FVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS---K 151 (286)
T ss_pred EEEEeccCCCcHHHHHHHh----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc---C
Confidence 9999999999999877543 13789999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 253 DSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
++.++|+|||++....... ......+++.|+|||.+.+. ++.++|+|||||++|+|++|..||...........+...
T Consensus 152 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~ 231 (286)
T cd06614 152 DGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK 231 (286)
T ss_pred CCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 7789999999986554321 22344688999999987654 588999999999999999999999877766555555443
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
... .......++..+.+||.+||+.+|.+|||+.+++.||||+..+.
T Consensus 232 ~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 278 (286)
T cd06614 232 GIP-PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACP 278 (286)
T ss_pred CCC-CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCc
Confidence 321 11122347889999999999999999999999999999998654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=327.38 Aligned_cols=257 Identities=33% Similarity=0.579 Sum_probs=212.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|....+||.|+||.||++.+..+|..||||.+.... ......+.+|+.+++.+ +||||+++++.+...+..|+|||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 97 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVME 97 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEEEEEe
Confidence 444567999999999999999999999999875432 23456788999999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++++|.+.+. ...+++..++.++.|++.||.|||+.|++||||+|+||+++ .++.++
T Consensus 98 ~~~~~~L~~~~~------------------~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~---~~~~~~ 156 (292)
T cd06657 98 FLEGGALTDIVT------------------HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDGRVK 156 (292)
T ss_pred cCCCCcHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEE
Confidence 999999977542 24578999999999999999999999999999999999998 477899
Q ss_pred EEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 258 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 258 l~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
|+|||++....... ......|++.|+|||.+.+ .++.++|+||+||++|+|++|..||.+....+....+....+..
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~- 235 (292)
T cd06657 157 LSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPK- 235 (292)
T ss_pred EcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcc-
Confidence 99999987654322 2234578999999998764 45889999999999999999999998776665555544332221
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCC
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~ 380 (577)
......+++.+.+++.+||..+|.+||++.+++.||||.......
T Consensus 236 ~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~ 280 (292)
T cd06657 236 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPS 280 (292)
T ss_pred cCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCCc
Confidence 112345788999999999999999999999999999999877533
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-40 Score=329.10 Aligned_cols=257 Identities=28% Similarity=0.466 Sum_probs=206.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN---- 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 170 (577)
.++|++.+.||.|+||.||+|.++.+|+.||||.+...... ......+.+|+.+++++ +||||+++++++.+..
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-EGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-cCchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhhh
Confidence 35799999999999999999999999999999998654321 22345677899999999 5999999999987654
Q ss_pred ------eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCc
Q 008127 171 ------YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 171 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~N 244 (577)
.+|+|+||+++ +|.+.+.. ....+++..++.++.||+.||.|||+.||+||||||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~----------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~n 146 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES----------------GLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSN 146 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc----------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 89999999975 66655432 13468999999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCCC--CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
|+++ .++.+||+|||++....... ......++..|+|||.+.+. .+.++|||||||++|+|++|++||.....
T Consensus 147 ili~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~ 223 (302)
T cd07864 147 ILLN---NKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE 223 (302)
T ss_pred EEEC---CCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 9998 47889999999998664332 12234568889999987543 47899999999999999999999987766
Q ss_pred hHHHHHHHhCCCCCCC--------------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 321 DGIFKEVLRNKPDFRR--------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~--------------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+.+..+......... ..+..++..+.++|.+||..||.+|||+.+++.||||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 224 LAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 5555444332110000 1123578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=334.99 Aligned_cols=261 Identities=31% Similarity=0.481 Sum_probs=208.9
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|.+.+.||+|+||.||+|.+..+|+.||+|++.+... .....+.+.+|+.+++++ +||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLE 92 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHc-CCCcccceeeeeeeccccc
Confidence 45689999999999999999999999999999999865422 122346678899999999 599999999988643
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
...|++++++ +++|.+.+. ...+++..++.++.||+.||.|||++||+||||||+||++
T Consensus 93 ~~~~~~lv~~~~-~~~L~~~~~------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll 153 (345)
T cd07877 93 EFNDVYLVTHLM-GADLNNIVK------------------CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 153 (345)
T ss_pred ccccEEEEehhc-ccCHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE
Confidence 3578899887 778866442 2458999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+ .++.+||+|||++..... ......||+.|+|||.+.+ .++.++|||||||++|+|++|+.||........+.
T Consensus 154 ~---~~~~~kl~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~ 228 (345)
T cd07877 154 N---EDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 228 (345)
T ss_pred c---CCCCEEEecccccccccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 8 477899999999876532 3345678999999998755 35789999999999999999999997766554444
Q ss_pred HHHhCCC-----------------------CCCCC----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKP-----------------------DFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~-----------------------~~~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+..... ..+.. .+...++.+.+||.+||+.||.+|||+.+++.||||+....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 229 LILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred HHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 3322110 00110 11235788999999999999999999999999999997655
Q ss_pred CC
Q 008127 379 AS 380 (577)
Q Consensus 379 ~~ 380 (577)
..
T Consensus 309 ~~ 310 (345)
T cd07877 309 PD 310 (345)
T ss_pred CC
Confidence 43
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=319.57 Aligned_cols=247 Identities=24% Similarity=0.363 Sum_probs=205.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+.. +..+|||.+..... ..+.+.+|+.+++.+ +||||+++++++.....+|+|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcEEE
Confidence 368999999999999999997653 45699998865432 345688999999999 599999999999998899999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ...+++..++.++.||+.||.|||+.|++|+||||+||+++ .++.
T Consensus 78 ~e~~~~~~l~~~i~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---~~~~ 138 (256)
T cd05113 78 TEYMSNGCLLNYLREH----------------GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---DQGC 138 (256)
T ss_pred EEcCCCCcHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCC
Confidence 9999999998876432 23689999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++......... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||......+....+....
T Consensus 139 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~ 218 (256)
T cd05113 139 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL 218 (256)
T ss_pred EEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCC
Confidence 999999998765433211 12345678999998864 56889999999999999998 999998877777777776654
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.... ....+..+.+++.+||..+|.+|||+.+++.+
T Consensus 219 ~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 219 RLYR---PHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred CCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 3322 23467899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=332.90 Aligned_cols=259 Identities=29% Similarity=0.430 Sum_probs=205.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCC--CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----CC
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKAN--GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DN 170 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~--~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~ 170 (577)
+|++.+.||+|+||.||+|.+..+ +..||||.+..... .......+.+|+.+++++.+||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488999999999999999999888 89999998864321 122356678899999999779999999986532 24
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+++||+. ++|.+.+. ....+++..++.++.||+.||.|||+.||+||||||+||+++
T Consensus 80 ~~~~~~e~~~-~~L~~~l~-----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~-- 139 (332)
T cd07857 80 ELYLYEELME-ADLHQIIR-----------------SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN-- 139 (332)
T ss_pred cEEEEEeccc-CCHHHHHh-----------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc--
Confidence 6889999985 67876553 236789999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCC-----CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~ 323 (577)
.++.+||+|||++....... ......||+.|+|||.+.+ .++.++|||||||++|+|++|.+||.+......
T Consensus 140 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~ 218 (332)
T cd07857 140 -ADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQ 218 (332)
T ss_pred -CCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHH
Confidence 47889999999997654321 1234579999999998754 358899999999999999999999977654444
Q ss_pred HHHHHhCCC-----------------------CCC----CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 324 FKEVLRNKP-----------------------DFR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 324 ~~~i~~~~~-----------------------~~~----~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
+..++.... ..+ ...++.++..+.+|+.+||+.||.+|||+.+++.||||+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 219 LNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred HHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence 333222100 000 11234567899999999999999999999999999999754
Q ss_pred C
Q 008127 377 G 377 (577)
Q Consensus 377 ~ 377 (577)
.
T Consensus 299 ~ 299 (332)
T cd07857 299 H 299 (332)
T ss_pred c
Confidence 3
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-42 Score=372.45 Aligned_cols=256 Identities=33% Similarity=0.562 Sum_probs=214.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.-++.-...||.|.||.||-|.+..+|...|+|.|...... ......+.+|+.++..+ +|||+|++|++-...+.++|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGL-NHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhc-cCccccccCceeecHHHHHH
Confidence 34667778899999999999999999999999988654433 34567788999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
.||||.||+|.+.+... +...+.....+..|++.|+.|||++|||||||||+||+|+ .+|
T Consensus 1312 FMEyC~~GsLa~ll~~g-----------------ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld---~~g 1371 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHG-----------------RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLD---FNG 1371 (1509)
T ss_pred HHHHhccCcHHHHHHhc-----------------chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeee---cCC
Confidence 99999999999866432 4466777788999999999999999999999999999999 478
Q ss_pred CeeEEecCCCcccCCCC-----CccccccCCccccchhcccCC----CCCCchhhHHHHHHHHHhCCCCCCCCC-hhHHH
Q 008127 255 SLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKT-EDGIF 324 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~----~~~~DiwSlG~il~el~tg~~Pf~~~~-~~~~~ 324 (577)
.+|++|||.|..+..+. ..+..+||+.|||||++.+.. ..+.||||||||+.||+||+.||...+ +-.++
T Consensus 1372 ~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIM 1451 (1509)
T KOG4645|consen 1372 LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIM 1451 (1509)
T ss_pred cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHH
Confidence 99999999998876542 245678999999999997532 678999999999999999999996543 33445
Q ss_pred HHHHhC-CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 325 KEVLRN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 325 ~~i~~~-~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
..+-.+ .|.++ ..+|.+.++||..||..||+.|.++.|+|+|.|-+..
T Consensus 1452 y~V~~gh~Pq~P----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1452 YHVAAGHKPQIP----ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred hHHhccCCCCCc----hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccc
Confidence 555443 33333 3489999999999999999999999999999997653
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-40 Score=326.15 Aligned_cols=255 Identities=33% Similarity=0.519 Sum_probs=208.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|.+.+.||.|+||.||+|++..+++.||||.+...... .......+|+..++++.+||||+++++++..++..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 67889999999999999999889999999998654321 1223456799999999559999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+ +|+|.+.+... ....+++..++.++.|++.+|.|||++|++|+||+|+||+++ .++.++
T Consensus 79 ~~-~~~l~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~---~~~~~~ 139 (283)
T cd07830 79 YM-EGNLYQLMKDR---------------KGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS---GPEVVK 139 (283)
T ss_pred cC-CCCHHHHHHhc---------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCCEE
Confidence 99 88998876543 124689999999999999999999999999999999999998 478999
Q ss_pred EEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 258 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 258 l~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
|+|||++.............|+..|+|||++.+ .++.++|+||||+++++|++|++||......+.+..+........
T Consensus 140 l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (283)
T cd07830 140 IADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPT 219 (283)
T ss_pred EeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCC
Confidence 999999987765545556678999999998753 358899999999999999999999987766555544432111000
Q ss_pred --------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 336 --------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 336 --------------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
....+..+..+.+||.+||..+|.+|||+.+++.||||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 220 KQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred hhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00112346789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=314.48 Aligned_cols=251 Identities=33% Similarity=0.570 Sum_probs=211.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|.+.+.||.|++|.||++.+..+++.||+|++..... .....+.+|+.+++.+. ||||+++++.+......++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEE
Confidence 37888999999999999999998999999999876532 35677899999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+... ...+++..++.++.|++.||.|||.+|++||||+|+||+++ .++.+
T Consensus 77 e~~~~~~L~~~~~~~----------------~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~ 137 (253)
T cd05122 77 EFCSGGSLKDLLKST----------------NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEV 137 (253)
T ss_pred ecCCCCcHHHHHhhc----------------CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeE
Confidence 999999998866432 25789999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
+|+|||.+.............|+..|+|||.+.+. ++.++||||||+++|+|++|..||...+.......+..... +
T Consensus 138 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~ 215 (253)
T cd05122 138 KLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP--P 215 (253)
T ss_pred EEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCC--C
Confidence 99999999877654323456789999999987654 57889999999999999999999987755444444333211 1
Q ss_pred CCCC-CCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 336 RKPW-PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 336 ~~~~-~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
.... ..++..+.++|.+||..||.+|||+.++++|||
T Consensus 216 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 216 GLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred CcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 1111 224789999999999999999999999999999
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=344.61 Aligned_cols=265 Identities=29% Similarity=0.503 Sum_probs=226.3
Q ss_pred CccccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 008127 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (577)
Q Consensus 88 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 167 (577)
+....+....|+|.+.||.|.+|.||+++++.+++..|||+..... ...++++.|.+||+.+++|||++.+|++|.
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 3334445567999999999999999999999999999999886653 245678889999999999999999999986
Q ss_pred -----cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCC
Q 008127 168 -----DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 242 (577)
Q Consensus 168 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp 242 (577)
.++.+|||||||.||++.|.+... +..++.|..+++|+..++.||.+||.+.+||||||-
T Consensus 87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~---------------~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG 151 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNT---------------KGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKG 151 (953)
T ss_pred EecCCCCCeEEEEeeccCCccHHHHHhhh---------------cccchhhHHHHHHHHHHHHHHHHHhhcceeeecccC
Confidence 357899999999999999987644 267899999999999999999999999999999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCCC-CCccccccCCccccchhcccC------CCCCCchhhHHHHHHHHHhCCCCC
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK------SGPESDVWSIGVITYILLCGRRPF 315 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~DiwSlG~il~el~tg~~Pf 315 (577)
.|||++ .++.|||+|||.+..+... ....+.+|||.|||||++... |...+|+||||++..||.-|.+|+
T Consensus 152 ~NiLLT---~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl 228 (953)
T KOG0587|consen 152 QNVLLT---ENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPL 228 (953)
T ss_pred ceEEEe---ccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCc
Confidence 999999 5889999999998876543 345678999999999998642 356799999999999999999999
Q ss_pred CCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 316 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 316 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.++-+...+-.|.+..+. ....|...++++.+||..||.+|-++||+..++|+|||+++
T Consensus 229 ~DmHPmraLF~IpRNPPP-kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 229 CDMHPMRALFLIPRNPPP-KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred cCcchhhhhccCCCCCCc-cccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 888777666555554332 22335667899999999999999999999999999999994
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=318.30 Aligned_cols=243 Identities=23% Similarity=0.345 Sum_probs=198.3
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+.||+|+||.||+|+++.+++.||+|.+.... .......+.+|+++++.+ +||||+++++++.....+|+||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeeccC
Confidence 36999999999999999999999999875432 234556789999999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
++|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++ .++.+||+||
T Consensus 78 ~~L~~~~~~~----------------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~kl~df 138 (252)
T cd05084 78 GDFLTFLRTE----------------GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EKNVLKISDF 138 (252)
T ss_pred CcHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CCCcEEECcc
Confidence 9998876422 34588999999999999999999999999999999999998 4678999999
Q ss_pred CCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCC
Q 008127 262 GLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR 336 (577)
Q Consensus 262 Gla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~ 336 (577)
|++......... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...........+..... .
T Consensus 139 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~---~ 215 (252)
T cd05084 139 GMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR---L 215 (252)
T ss_pred ccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC---C
Confidence 998765432111 11123456999998764 46889999999999999998 8999977766655555544322 1
Q ss_pred CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 337 ~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.....++..+.+|+.+||..+|.+|||+.++++
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 216 PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 223456889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=318.79 Aligned_cols=245 Identities=33% Similarity=0.605 Sum_probs=211.3
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||.|+||.||++.+..+++.||+|.+.+...........+..|+.+++.+. ||||+++++.+..++.+|+||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 699999999999998899999999987765544446678899999999995 9999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+++... ..+++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.++|+|||+
T Consensus 80 L~~~l~~~-----------------~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~~~~~l~d~~~ 139 (250)
T cd05123 80 LFSHLSKE-----------------GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGL 139 (250)
T ss_pred HHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CCCcEEEeecCc
Confidence 98877433 4689999999999999999999999999999999999998 477899999999
Q ss_pred CcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCC
Q 008127 264 SDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341 (577)
Q Consensus 264 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 341 (577)
+...... .......++..|+|||.+.+. .+.++|+||||+++|+|++|..||...........+......++ ..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~ 215 (250)
T cd05123 140 AKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP----EF 215 (250)
T ss_pred ceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC----CC
Confidence 9876543 233456789999999987654 47889999999999999999999987776666666665433322 34
Q ss_pred CCHHHHHHHHHccccCcCCCCCH---HHHhcCccc
Q 008127 342 ISNSAKDFVKKLLVKDPRARLTA---AQALSHPWV 373 (577)
Q Consensus 342 ~s~~~~~li~~~l~~dP~~Rpt~---~~il~hp~f 373 (577)
++..+.++|.+||..||++|||+ .++++||||
T Consensus 216 ~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 216 LSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 58899999999999999999999 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=315.45 Aligned_cols=252 Identities=34% Similarity=0.580 Sum_probs=213.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|.+.+.||.|++|.||++.+..+++.||+|.+...... ......+.+|++++.++ .|||++++++++...+.+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEE
Confidence 488999999999999999999999999999998765432 24567899999999999 4999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+.+.. ...+++..++.++.|++.||.|||+.||+||||||+||+++. ++.+
T Consensus 79 e~~~~~~L~~~~~~-----------------~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~---~~~~ 138 (254)
T cd06627 79 EYAENGSLRQIIKK-----------------FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK---DGVV 138 (254)
T ss_pred ecCCCCcHHHHHHh-----------------ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC---CCCE
Confidence 99999999887643 257899999999999999999999999999999999999984 7889
Q ss_pred eEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+|+|||++........ .....++..|+|||.+.+. ++.++||||+|+++|+|++|..||.................
T Consensus 139 ~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-- 216 (254)
T cd06627 139 KLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH-- 216 (254)
T ss_pred EEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC--
Confidence 9999999987654332 2345789999999987643 57889999999999999999999987665444444432211
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
....+.++..+.+++.+||..+|++|||+.+++.||||
T Consensus 217 -~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 217 -PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred -CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 12234678999999999999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-40 Score=334.57 Aligned_cols=264 Identities=30% Similarity=0.467 Sum_probs=210.1
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CC
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DN 170 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~ 170 (577)
.+.++|.+.+.||.|+||.||+|.+..+|..||||++..... .......+.+|+.++.++.+||||+++++++.. ..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 456789999999999999999999998999999998854321 123445677899999999559999999999864 34
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+||||++ ++|.+.+. ...+++..+..++.||+.||.|||+.||+||||||+||+++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~------------------~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~-- 141 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIR------------------ANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN-- 141 (337)
T ss_pred eEEEEecccc-cCHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc--
Confidence 6899999996 58876552 13677888899999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCC------CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 251 KEDSSLKATDFGLSDFIKPGK------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
.++.+||+|||++....... ......||+.|+|||.+.+ ..+.++|||||||++|+|++|+.||.+....+
T Consensus 142 -~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~ 220 (337)
T cd07852 142 -SDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN 220 (337)
T ss_pred -CCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 57899999999997654322 2234578999999998754 35789999999999999999999998766544
Q ss_pred HHHHHHhCCCC---------------------------CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 323 IFKEVLRNKPD---------------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 323 ~~~~i~~~~~~---------------------------~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
....+...... ......+.++.++.++|.+||+.||.+|||+.++++||||+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~ 300 (337)
T cd07852 221 QLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300 (337)
T ss_pred HHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence 43333221110 011122447889999999999999999999999999999987
Q ss_pred cCCC
Q 008127 376 GGDA 379 (577)
Q Consensus 376 ~~~~ 379 (577)
....
T Consensus 301 ~~~~ 304 (337)
T cd07852 301 FHNP 304 (337)
T ss_pred hccC
Confidence 6443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=325.41 Aligned_cols=266 Identities=23% Similarity=0.316 Sum_probs=210.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++.+.||+|+||.||++.+... ...+|+|.+..... ......+.+|+.+++++.+||||+++++++..++
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 4799999999999999999987643 36899998865432 3345678899999999966999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+++||||+++|+|.+++........... ..........+++..+..++.||+.||.|||+.+|+||||||+|||++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~-- 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYAS-PDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT-- 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccc-cccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc--
Confidence 99999999999999998865321111000 000112346789999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++........ .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+...
T Consensus 167 -~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 245 (293)
T cd05053 167 -EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 245 (293)
T ss_pred -CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence 478999999999987654321 122335677999998754 46889999999999999997 999998887777666
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+..... . ......+..+.+|+.+||..||.+|||+.+++++
T Consensus 246 ~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 246 LLKEGYR-M--EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHcCCc-C--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 6554321 1 1224578899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=330.14 Aligned_cols=256 Identities=28% Similarity=0.406 Sum_probs=203.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC------
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD------ 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~------ 169 (577)
++|.+.+.||.|+||.||+|.++.+++.||||++...... ......+.+|+++++.+ +||||+++++++...
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK-DGFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC-CCcchhHHHHHHHHHhc-CCCCccchhhheecccccccc
Confidence 5799999999999999999999999999999988654321 11234567899999999 599999999887543
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|+||||+.+ +|...+.. ....+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~----------------~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~ 148 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLEN----------------PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI 148 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhc----------------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 357999999964 66554422 23578999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC------------CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCC
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK------------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~------------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~ 313 (577)
+ .++.+||+|||++....... ......|++.|+|||++.+ .++.++|||||||++|+|++|++
T Consensus 149 ~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~ 225 (311)
T cd07866 149 D---NQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRP 225 (311)
T ss_pred C---CCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCC
Confidence 8 47899999999997543221 1223467889999998754 35889999999999999999999
Q ss_pred CCCCCChhHHHHHHHhCCCCCCC--------------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHH
Q 008127 314 PFWDKTEDGIFKEVLRNKPDFRR--------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQA 367 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~~~~~~~~--------------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~i 367 (577)
||.+.+.......+......... ..+..+++.+.+||.+||..||.+|||+.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~el 305 (311)
T cd07866 226 ILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDA 305 (311)
T ss_pred CCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHH
Confidence 99887776655554432111000 0012345678999999999999999999999
Q ss_pred hcCccc
Q 008127 368 LSHPWV 373 (577)
Q Consensus 368 l~hp~f 373 (577)
+.||||
T Consensus 306 l~~~~f 311 (311)
T cd07866 306 LEHPYF 311 (311)
T ss_pred hcCCCC
Confidence 999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-40 Score=334.31 Aligned_cols=258 Identities=26% Similarity=0.350 Sum_probs=200.6
Q ss_pred CccccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 008127 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (577)
Q Consensus 88 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 167 (577)
+.....+++.|.-...||+|+||.||+|.- .+|..||||++...... . ..+|.+|+.++.+++ |||+|+|+|||.
T Consensus 67 ~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~--~-~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~ 141 (361)
T KOG1187|consen 67 YDELRKATNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQ--G-EREFLNEVEILSRLR-HPNLVKLLGYCL 141 (361)
T ss_pred HHHHHHHHhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCc--c-hhHHHHHHHHHhcCC-CcCcccEEEEEe
Confidence 333445667888888999999999999984 45589999987665421 1 455999999999996 999999999999
Q ss_pred cCC-eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCC-CCCHHHHHHHHHHHHHHHHHHHhc---CceeccCCC
Q 008127 168 DDN-YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS-RYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKP 242 (577)
Q Consensus 168 ~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~i~~qil~~l~~LH~~---~iiHrDlKp 242 (577)
+.+ ..+||+||+++|+|.++|... .. .+++.....|+.+++.||+|||.. .||||||||
T Consensus 142 e~~~~~~LVYEym~nGsL~d~L~~~----------------~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKs 205 (361)
T KOG1187|consen 142 EGGEHRLLVYEYMPNGSLEDHLHGK----------------KGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKS 205 (361)
T ss_pred cCCceEEEEEEccCCCCHHHHhCCC----------------CCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCH
Confidence 988 599999999999999988543 12 789999999999999999999985 399999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCC-CCCcccc-ccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDI-VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~-~~~~~~~-~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
+||||+ ++..+||+|||+|+.... ....... .||.+|+|||.+. +..+.++|||||||+|.||+||+.|.....
T Consensus 206 sNILLD---~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~ 282 (361)
T KOG1187|consen 206 SNILLD---EDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSR 282 (361)
T ss_pred HHeeEC---CCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCC
Confidence 999999 589999999999976654 3333333 8999999999875 567999999999999999999998886432
Q ss_pred ---h---hHHHHHHHhCC--CCCCCCCC--CCCC-----HHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 320 ---E---DGIFKEVLRNK--PDFRRKPW--PSIS-----NSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 320 ---~---~~~~~~i~~~~--~~~~~~~~--~~~s-----~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
. .+.....+... .++..+.. ...+ ..+..+..+|++.+|..||++.++++
T Consensus 283 ~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 283 PRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred CcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 1 11111222211 11111111 1222 23668889999999999999999744
|
|
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=325.18 Aligned_cols=262 Identities=21% Similarity=0.239 Sum_probs=207.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC----------------CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG----------------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~----------------~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 159 (577)
.+|++++.||+|+||.||+|.+..++ ..||+|.+..... ....+.+.+|++++.++. ||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i 81 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLS-DPNI 81 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcC-CCCE
Confidence 47999999999999999999876543 5689998875432 245678899999999995 9999
Q ss_pred eEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q 008127 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239 (577)
Q Consensus 160 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrD 239 (577)
+++++++..++..++||||+++++|.+++.......... ......+++..++.++.|++.||.|||++||+|||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~d 155 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGL------ACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRD 155 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccc------cccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 999999999999999999999999998875431100000 11224689999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh--CCC
Q 008127 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC--GRR 313 (577)
Q Consensus 240 lKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t--g~~ 313 (577)
|||+||+++ .++.++|+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..
T Consensus 156 lkp~Nili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 232 (296)
T cd05051 156 LATRNCLVG---KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQ 232 (296)
T ss_pred cchhceeec---CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCC
Confidence 999999998 468999999999976543321 223456788999998765 66899999999999999998 788
Q ss_pred CCCCCChhHHHHHHHhC----CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 314 PFWDKTEDGIFKEVLRN----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
||...+..+.+..+... .........+.++.++.+++.+||..||.+|||+.++++
T Consensus 233 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 233 PYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred CCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 98777766666655432 111111122456789999999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=319.23 Aligned_cols=250 Identities=24% Similarity=0.347 Sum_probs=206.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
++|++.+.||+|+||.||+|.+..+ ...||||.+.... .......+.+|+.+++.+ +||||+++++.+...+.+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCce
Confidence 4689999999999999999988654 4579999886543 233556788999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++||||+++++|.+++... ...+++..+..++.|++.||.|||+++|+||||||+|||++ .
T Consensus 81 ~iv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~---~ 141 (266)
T cd05033 81 MIITEYMENGSLDKFLREN----------------DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN---S 141 (266)
T ss_pred EEEEEcCCCCCHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---C
Confidence 9999999999998877432 24689999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCC-CCcc--ccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPG-KKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~-~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i 327 (577)
++.++|+|||++...... .... ...+++.|+|||.+.+ .++.++||||||+++|+|++ |..||...........+
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~ 221 (266)
T cd05033 142 NLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV 221 (266)
T ss_pred CCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Confidence 788999999999876421 1111 2345678999998764 46889999999999999998 99999887777776666
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
...... +....++..+.+|+.+||..+|.+||++.+++++
T Consensus 222 ~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 222 EDGYRL---PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 543221 1224578999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=320.65 Aligned_cols=258 Identities=21% Similarity=0.292 Sum_probs=208.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++.+.||+|+||.||+|.++.. +..||+|.+..... ......+.+|+.++..+ +||||+++++++....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS--MRERIEFLNEASVMKEF-NCHHVVRLLGVVSTGQ 82 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC--HHHHHHHHHHHHHHHhC-CCCceeEEEEEEcCCC
Confidence 4799999999999999999987643 47899999865432 23456788999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..|+||||+++|+|.+++........ .......+++..+..++.||+.||.|||+.+|+||||||+|||++
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~-- 153 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAE-------NNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA-- 153 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchh-------hccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc--
Confidence 99999999999999998864311000 001234578899999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||+++.+..... .....+|..|+|||.+. +.++.++|||||||++|+|++ |..||.+.+..+...
T Consensus 154 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 232 (277)
T cd05032 154 -EDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK 232 (277)
T ss_pred -CCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH
Confidence 478899999999976543321 12345678999999875 456889999999999999998 999998888777776
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..... .. ....++..+.+++.+||+.+|.+|||+.++++
T Consensus 233 ~~~~~~~-~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 233 FVIDGGH-LD--LPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHhcCCC-CC--CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 6653322 11 12346889999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=320.16 Aligned_cols=254 Identities=20% Similarity=0.292 Sum_probs=204.6
Q ss_pred eeeeeeecccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe---
Q 008127 98 YTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY--- 171 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~--- 171 (577)
|.+.+.||+|+||.||+|....+ +..||||.+..... .......+.+|+.+++.+ +||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCcccc
Confidence 56788999999999999987653 47899999865432 233467789999999999 59999999998865443
Q ss_pred ---EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 172 ---VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 172 ---~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.++||||+++|+|...+..... ......+++..++.++.|++.||.|||+.+|+||||||+||+++
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~ 147 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRL-----------GGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR 147 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhc-----------cCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEEC
Confidence 7999999999999887754311 01224689999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCc---cccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
+++.+||+|||+++........ ....++..|+|||.+.+. ++.++|||||||++|||++ |..||.+....+.
T Consensus 148 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~ 224 (273)
T cd05035 148 ---EDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEI 224 (273)
T ss_pred ---CCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 4788999999999866433221 123456789999988654 5889999999999999999 9999988877777
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+..+..+... .....++..+.+++.+||..||.+|||+.+++++
T Consensus 225 ~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 225 YDYLRHGNRL---KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred HHHHHcCCCC---CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 7666554321 1224578999999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=321.58 Aligned_cols=248 Identities=23% Similarity=0.342 Sum_probs=208.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++.+.||.|+||.||+|.+.. +..+|+|.+.... ......+.+|+.+++.+ +||||+++++++...+.+++|
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeEEE
Confidence 469999999999999999999877 8899999987653 22456788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ....++...+..++.||+.||.|||++||+||||||+||+++ .++.
T Consensus 81 ~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~ 142 (261)
T cd05148 81 TELMEKGSLLAFLRSP---------------EGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLV 142 (261)
T ss_pred EeecccCCHHHHHhcC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCce
Confidence 9999999999877532 235688999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++........ .....++..|+|||.+.+ .++.++||||||+++|+|++ |+.||...+..+.+..+.....
T Consensus 143 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~ 222 (261)
T cd05148 143 CKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR 222 (261)
T ss_pred EEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc
Confidence 99999999976643221 123346678999998764 45889999999999999998 8999988877777777764322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
......+++.+.+++.+||..||.+|||+.++++
T Consensus 223 ---~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 223 ---MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred ---CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 2223567899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=325.73 Aligned_cols=256 Identities=29% Similarity=0.519 Sum_probs=207.6
Q ss_pred ceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+|++.+.||+|+||.||+|++. .++..||||++.+.... .......+.+|+.++.++.+||||+++++.+..+..+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3889999999999999999864 46789999998654321 1224466889999999997899999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++|+|.+.+.. ...+++..++.++.|++.||.|||+.+++||||||+||+++ .
T Consensus 81 ~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~---~ 140 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ-----------------REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD---S 140 (288)
T ss_pred EEEEecCCCCcHHHHHhh-----------------cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---C
Confidence 999999999999886642 25688999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCC--ccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHhCCCCCCCCC----hhHH
Q 008127 253 DSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKT----EDGI 323 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~tg~~Pf~~~~----~~~~ 323 (577)
++.++|+|||++........ .....|+..|+|||.+.+. .+.++||||||+++|+|++|..||.... ..+.
T Consensus 141 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 220 (288)
T cd05583 141 EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEI 220 (288)
T ss_pred CCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHH
Confidence 67899999999876543322 2235689999999987643 4788999999999999999999995432 2233
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC---HHHHhcCcccccc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 376 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt---~~~il~hp~f~~~ 376 (577)
...+...... ....++..+.++|.+||+.||++||| +.++|+||||+..
T Consensus 221 ~~~~~~~~~~----~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 221 SRRILKSKPP----FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred HHHHHccCCC----CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 3334333322 22457889999999999999999998 5677999999875
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=328.18 Aligned_cols=261 Identities=33% Similarity=0.518 Sum_probs=208.2
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-CCe
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNY 171 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~ 171 (577)
.+.++|++.+.||.|+||.||+|.+..+|+.||||++.+... .......+.+|+.+++.+ .||||++++++|.. ...
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLED 84 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCc
Confidence 356789999999999999999999999999999998865322 123456678999999999 49999999999875 567
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|+||+ +++|.+.+. ...+++..+..++.||+.||.|||+.+|+||||+|+|||++
T Consensus 85 ~~lv~e~~-~~~L~~~~~------------------~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~--- 142 (328)
T cd07856 85 IYFVTELL-GTDLHRLLT------------------SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN--- 142 (328)
T ss_pred EEEEeehh-ccCHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC---
Confidence 89999998 567766442 24578888999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
.++.+||+|||++..... ......+++.|+|||.+.+ .++.++|||||||++|+|++|+.||.+.........+..
T Consensus 143 ~~~~~~l~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~ 220 (328)
T cd07856 143 ENCDLKICDFGLARIQDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD 220 (328)
T ss_pred CCCCEEeCccccccccCC--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 478899999999976532 2244578899999998754 468899999999999999999999977654322211111
Q ss_pred C-----------------------CC---CCC-CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 330 N-----------------------KP---DFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 330 ~-----------------------~~---~~~-~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
. .. ..+ ....+.++..+.++|.+||+.+|++|||+.+++.||||......
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~ 297 (328)
T cd07856 221 LLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP 297 (328)
T ss_pred HhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence 0 00 000 01124577899999999999999999999999999999865543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=336.45 Aligned_cols=268 Identities=22% Similarity=0.285 Sum_probs=209.1
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|.+++.||+|+||.||+|++. .+++.||||++..... ....+.+.+|+.+|.++..||||+++++++...+
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 46889999999999999999864 3456899999975432 2334578899999999955999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhh------------------------------------------------------
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTT------------------------------------------------------ 196 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~------------------------------------------------------ 196 (577)
.+++|||||++|+|.+++........
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999999875421000
Q ss_pred ---------------------------hhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 197 ---------------------------LTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 197 ---------------------------~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
....+.........++...++.++.||+.||.|||+.+|+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~- 273 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC- 273 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe-
Confidence 0000111122334678889999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||+++....... .....+++.|+|||.+.+. ++.++|||||||++|||++ |..||......+..
T Consensus 274 --~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~ 351 (401)
T cd05107 274 --EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF 351 (401)
T ss_pred --CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH
Confidence 477899999999976532211 1234578899999987654 5889999999999999998 89999776655555
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
...+...... ..+..++.++.+|+.+||..+|.+||++.++++.
T Consensus 352 ~~~~~~~~~~--~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 352 YNAIKRGYRM--AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 5544433222 1234578999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=310.97 Aligned_cols=265 Identities=24% Similarity=0.311 Sum_probs=217.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
.+-+..||.|+||+|++-.++.+|+..|||+|..... .....+++.|.+...+-.+.||||++||.+-.++..||.||
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME 143 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME 143 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence 3445679999999999999999999999999987653 45678899999988888899999999999988999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCCe
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
+|. -+| |.+... .+..+...++|.-+..|..-.+.||.||-. ..|||||+||+|||++ ..|.|
T Consensus 144 LMd-~Sl-DklYk~-----------vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILld---r~G~v 207 (361)
T KOG1006|consen 144 LMD-ISL-DKLYKR-----------VYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLD---RHGDV 207 (361)
T ss_pred HHh-hhH-HHHHHH-----------HHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEe---cCCCE
Confidence 994 343 333322 233356789999999999999999999986 6899999999999999 58899
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCC-hhHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~-~~~~~~~i~~~~~ 332 (577)
||||||.+..+..+-..+.-+|...|||||.+.. +|.-++||||||++|||+.||..||.+.+ ..+.+..+..+.+
T Consensus 208 KLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdp 287 (361)
T KOG1006|consen 208 KLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDP 287 (361)
T ss_pred eeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCC
Confidence 9999999987765444445579999999998863 36889999999999999999999997653 4556666666665
Q ss_pred CCCCCCC--CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCC
Q 008127 333 DFRRKPW--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380 (577)
Q Consensus 333 ~~~~~~~--~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~ 380 (577)
+.....- -.++..+..||..||.+|-..||...+++++||++.+....
T Consensus 288 p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~ 337 (361)
T KOG1006|consen 288 PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEG 337 (361)
T ss_pred CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcC
Confidence 4332221 24788999999999999999999999999999999876543
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=317.43 Aligned_cols=246 Identities=23% Similarity=0.360 Sum_probs=203.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.++ ++..+|+|.+..... ....+.+|+.+++.+ +||||+++++++...+..|+||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEEEE
Confidence 5889999999999999999875 466899998865432 235678899999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++... ...+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+
T Consensus 79 e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~ 139 (256)
T cd05059 79 EYMANGCLLNYLRER----------------KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---EDNVV 139 (256)
T ss_pred ecCCCCCHHHHHHhc----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---CCCcE
Confidence 999999999877532 24688999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
||+|||+++........ ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...+..+....+.....
T Consensus 140 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~ 219 (256)
T cd05059 140 KVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR 219 (256)
T ss_pred EECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc
Confidence 99999999765432211 11233457999998764 56889999999999999999 8999987777776666654322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.......+.++.+++.+||..+|++|||+.++++.
T Consensus 220 ---~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 220 ---LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ---CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 11224578999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=317.91 Aligned_cols=246 Identities=26% Similarity=0.363 Sum_probs=201.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++.+.||+|+||.||+|.+..+ ..||+|.+..... ..+.+.+|+++++.+ +||||+++++.+.. ...|+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-~~~~lv 78 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIV 78 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhC-CCCCcceEEEEECC-CCcEEE
Confidence 5799999999999999999987655 4699999875432 345688999999999 59999999998754 568999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ....+++..+..++.|++.||.|||+.+|+||||||+||+++ .++.
T Consensus 79 ~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~ 140 (262)
T cd05071 79 TEYMSKGSLLDFLKGE---------------MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLV 140 (262)
T ss_pred EEcCCCCcHHHHHhhc---------------cccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCc
Confidence 9999999998877432 224578899999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCc--cccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||.+......... ....++..|+|||++. +.++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 141 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~ 220 (262)
T cd05071 141 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 220 (262)
T ss_pred EEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC
Confidence 999999999765433221 2334667899999875 456889999999999999999 888998877777766665432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. .....++..+.+|+.+||..+|.+|||+.++++
T Consensus 221 ~~---~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 221 RM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred CC---CCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 21 112457899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=324.23 Aligned_cols=254 Identities=33% Similarity=0.518 Sum_probs=209.0
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|.+.+.||.|++|.||+|.+..+|+.+|+|.+..... .+.....+.+|+.+++++. ||||+++++++..+..+++|+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEe
Confidence 5678899999999999999998999999999865432 2234567889999999995 9999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++ +|.+.+... ...+++..+..++.||+.||.|||+.+|+|+||||+||+++ .++.+|
T Consensus 79 ~~~~-~l~~~l~~~----------------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~ 138 (283)
T cd05118 79 FMDT-DLYKLIKDR----------------QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---TEGVLK 138 (283)
T ss_pred ccCC-CHHHHHHhh----------------cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---CCCcEE
Confidence 9975 887766432 25789999999999999999999999999999999999998 478899
Q ss_pred EEecCCCcccCCCC-CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 258 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 258 l~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
|+|||.+....... ......++..|+|||.+.+. ++.++||||||+++|+|++|+.||.+.+..+.+..+.......
T Consensus 139 l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~ 218 (283)
T cd05118 139 LADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTP 218 (283)
T ss_pred EeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 99999997765433 33445788999999987653 5889999999999999999999998777655544443211110
Q ss_pred C--------------------------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 335 R--------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 335 ~--------------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
. ...++.++.++.+||.+||.+||.+||++.+++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 219 DPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred chHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 0 01123467889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=324.06 Aligned_cols=264 Identities=17% Similarity=0.229 Sum_probs=210.0
Q ss_pred ceeeeeeecccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+|++.+.||+|+||.||+|.+..+ +..||||++.... .......+.+|+.++..+ +||||+++++++.....
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCCc
Confidence 588899999999999999987543 5789999987543 223456788999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++++||+++++|.+++............ .........+++..+..++.|++.||.|||++||+||||||+|||++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~--- 158 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGST-DDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF--- 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCcccccc-ccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec---
Confidence 99999999999999887543211111000 00111234688899999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+++....... .....+++.|+|||.+. +.++.++|||||||++|||++ |..||.+....+....
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM 238 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 467899999999876543222 22345678999999875 556889999999999999998 8899988888777777
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+....... ....++..+.+|+.+||+.+|.+||++.+++..
T Consensus 239 i~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 239 IRNRQVLP---CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HHcCCcCC---CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 76654322 124688999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=325.27 Aligned_cols=265 Identities=23% Similarity=0.323 Sum_probs=206.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
++|.+.+.||+|+||.||+|.+.. ++..+|+|.+.... .......+.+|+.+++.+.+||||+++++++..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 579999999999999999998643 33579999887542 233456788999999999669999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+.+|+||||+++|+|.+++........ ...+.........++...++.++.||+.||.|||++|++||||||+|||++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGM-EYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 174 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCccc-ccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc
Confidence 9999999999999999998865311000 000000001224588899999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+.
T Consensus 175 ---~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~ 251 (307)
T cd05098 175 ---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251 (307)
T ss_pred ---CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 468899999999876543221 112234578999998765 45889999999999999998 8999987776666
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+..... ......++.++.+|+.+||..+|.+|||+.++++
T Consensus 252 ~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 252 FKLLKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HHHHHcCCC---CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 665544321 1223467899999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=316.52 Aligned_cols=247 Identities=24% Similarity=0.327 Sum_probs=204.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+. +++.||+|.+..... ..+.+.+|+.+++++. ||||+++++++...+.+|+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCC-CCCccceeEEEecCCCeeee
Confidence 46999999999999999999865 457899999865432 3466889999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++... ....++...+..++.|++.||.|||+.||+||||||+||+++ .++.
T Consensus 80 ~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~ 141 (261)
T cd05068 80 TELMKYGSLLEYLQGG---------------AGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG---ENNI 141 (261)
T ss_pred eecccCCcHHHHHhcc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc---CCCC
Confidence 9999999999877432 134688999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++......... ....++..|+|||++.+ .++.++||||||+++|+|++ |+.||.+.+....+..+....
T Consensus 142 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~ 221 (261)
T cd05068 142 CKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY 221 (261)
T ss_pred EEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence 999999999876532111 11223457999998765 45889999999999999999 999998877777776665432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
. . .....++..+.+++.+||..+|.+||++.++++
T Consensus 222 ~-~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 222 R-M--PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred C-C--CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 1 1 122457899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=318.54 Aligned_cols=258 Identities=24% Similarity=0.331 Sum_probs=200.8
Q ss_pred eecccCCeEEEEEEEcCCCC--EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~~--~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||+|++..++. .+|+|.+.... .......+.+|+.++.++.+||||+++++++...+.+|+||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 59999999999999988876 46888775322 233456788999999999779999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++......... ..+.........+++..++.++.|++.||.|||+.|++||||||+|||++ .++.+||+|
T Consensus 80 ~~~L~~~i~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~---~~~~~kl~d 155 (270)
T cd05047 80 HGNLLDFLRKSRVLETD-PAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIAD 155 (270)
T ss_pred CCcHHHHHHhccccccc-cccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc---CCCeEEECC
Confidence 99999988654211000 00001111234688999999999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008127 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKP 338 (577)
Q Consensus 261 FGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 338 (577)
||++..............+..|+|||++.. .++.++|||||||++|+|++ |..||.+.+..+.+..+.... ....
T Consensus 156 fgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~---~~~~ 232 (270)
T cd05047 156 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY---RLEK 232 (270)
T ss_pred CCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC---CCCC
Confidence 999864321111112234567999998764 45889999999999999997 999998877777666664432 1122
Q ss_pred CCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 339 WPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 339 ~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...++.++.+++.+||..+|.+|||+.+++.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 233 PLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 2457789999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=320.42 Aligned_cols=247 Identities=28% Similarity=0.441 Sum_probs=199.5
Q ss_pred eeeeeecccCCeEEEEEEEc----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 99 TIGKLLGHGQFGYTYVATDK----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 99 ~~~~~lG~G~fg~V~~~~~~----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+.+.||.|+||.||+|... ..+..|+||.+... ......+.+.+|+++++++ +||||+++++++...+.+++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeecccccccc-cccccccccccccccccccc
Confidence 46788999999999999987 44678999998543 2234578899999999999 69999999999998888999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|+|||++|+|.++|... ....+++..+..++.||+.||.|||+++++|+||+|+|||++ .++
T Consensus 79 v~e~~~~g~L~~~L~~~---------------~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~---~~~ 140 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSK---------------NKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD---SNG 140 (259)
T ss_dssp EEE--TTEBHHHHHHHT---------------CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE---TTT
T ss_pred ccccccccccccccccc---------------cccccccccccccccccccccccccccccccccccccccccc---ccc
Confidence 99999999999988643 246789999999999999999999999999999999999999 478
Q ss_pred CeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 255 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
.+||+|||++........ .....+...|+|||.+... ++.++||||||+++|||++ |+.||......+....+..
T Consensus 141 ~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~ 220 (259)
T PF07714_consen 141 QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQ 220 (259)
T ss_dssp EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999987632221 1234577889999998655 5889999999999999999 7899988888777777754
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+.. .. ....++..+.++|..||..+|.+|||+.++++
T Consensus 221 ~~~-~~--~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 221 GQR-LP--IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp TEE-TT--SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccc-ce--eccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 433 11 22457899999999999999999999999875
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=315.07 Aligned_cols=255 Identities=27% Similarity=0.449 Sum_probs=215.8
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||++.+..+++.+|+|.+...... ......+.+|+.+++.+. ||||+++++++.....+|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEe
Confidence 488999999999999999999999999999998765432 334567789999999995 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++.... .....+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++.+
T Consensus 79 e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~---~~~~ 142 (256)
T cd08530 79 EYAPFGDLSKAISKRK-------------KKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA---NDLV 142 (256)
T ss_pred hhcCCCCHHHHHHHHH-------------hhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec---CCcE
Confidence 9999999998775431 12367899999999999999999999999999999999999984 6789
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
||+|||++...... ......|++.|+|||.+.+. ++.++|+||||+++|+|++|+.||...+..+....+......
T Consensus 143 kl~d~g~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-- 219 (256)
T cd08530 143 KIGDLGISKVLKKN-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP-- 219 (256)
T ss_pred EEeeccchhhhccC-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC--
Confidence 99999999876544 33345789999999987654 477899999999999999999999888776666665543322
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
. ....++.++.+++.+||..+|.+|||+.++++||++
T Consensus 220 ~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 220 P-IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred C-CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 1 113577899999999999999999999999999974
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=315.86 Aligned_cols=247 Identities=23% Similarity=0.348 Sum_probs=203.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+.|+++++||+|+||.||+|.. .+++.||+|.+..... ....+.+|+.+++++ +||||+++++++. .+.+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~ 77 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM----SPEAFLAEANLMKQL-QHPRLVRLYAVVT-QEPIYI 77 (260)
T ss_pred hHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC----cHHHHHHHHHHHHhc-CCcCeeeEEEEEc-cCCcEE
Confidence 45799999999999999999985 4678999999876543 346788999999999 5999999999875 456899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+.+... ....++...+..++.|++.||+|||+.|++||||||+||+++ .++
T Consensus 78 v~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~ 139 (260)
T cd05067 78 ITEYMENGSLVDFLKTP---------------EGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS---ETL 139 (260)
T ss_pred EEEcCCCCCHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc---CCC
Confidence 99999999999876432 235688999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.++|+|||++........ .....++..|+|||++.+ .++.++||||||+++|+|++ |++||.+.+..+....+...
T Consensus 140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 219 (260)
T cd05067 140 CCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG 219 (260)
T ss_pred CEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC
Confidence 899999999976542221 123346678999998864 45889999999999999999 99999888777766665443
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. .......+.++.+++.+||..+|++|||+++++.
T Consensus 220 ~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 220 YR---MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred CC---CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 21 1223457789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=317.33 Aligned_cols=249 Identities=23% Similarity=0.355 Sum_probs=205.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+|++.+.||+|+||.||+|.++.++. .+|+|.+.... .......+.+|+.+++++ +||||+++++++..++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcc
Confidence 479999999999999999998865543 79999886542 233456789999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++++|.+++... ...++...+..++.|++.||.|||+.+++||||||+|||++ .
T Consensus 81 ~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~---~ 141 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKH----------------DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN---S 141 (267)
T ss_pred EEEEEcCCCCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC---C
Confidence 9999999999998876432 24688999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCCc----cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
++.++|+|||++......... ....++..|+|||.+.+ .++.++|+|||||++|++++ |..||.+....+....
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~ 221 (267)
T cd05066 142 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKA 221 (267)
T ss_pred CCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHH
Confidence 788999999999876432211 12233568999998874 56889999999999999886 9999988877666666
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+.... .. +....+++.+.+++.+||+.+|.+||++.++++
T Consensus 222 ~~~~~-~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 222 IEEGY-RL--PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred HhCCC-cC--CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 65442 22 223467889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=315.51 Aligned_cols=241 Identities=24% Similarity=0.314 Sum_probs=197.0
Q ss_pred eecccCCeEEEEEEE--cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATD--KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~--~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||+|.+ ..++..||+|++..... .....+.+.+|+.+++.+ +||||+++++++.. ...++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN-DPALKDELLREANVMQQL-DNPYIVRMIGICEA-ESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC-cHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCcEEEEecCC
Confidence 589999999999964 45778999998864432 334567889999999999 59999999998864 46789999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||.||+++ .++.+||+|
T Consensus 79 ~~~L~~~l~~-----------------~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~---~~~~~kl~D 138 (257)
T cd05116 79 LGPLNKFLQK-----------------NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV---TQHYAKISD 138 (257)
T ss_pred CCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc---CCCeEEECC
Confidence 9999887642 25689999999999999999999999999999999999998 477899999
Q ss_pred cCCCcccCCCCCc----cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008127 261 FGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 261 FGla~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||++......... ....+++.|+|||.+.. .++.++|||||||++|||++ |..||.+....+....+..+.. .
T Consensus 139 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~-~ 217 (257)
T cd05116 139 FGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER-M 217 (257)
T ss_pred CccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-C
Confidence 9999876433221 12234678999998764 45789999999999999998 9999988777777666654432 1
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+.+++++.+||.+||+.||++||++.+|..
T Consensus 218 --~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 218 --ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 122458899999999999999999999998854
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=297.68 Aligned_cols=254 Identities=28% Similarity=0.549 Sum_probs=212.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~ 173 (577)
++|++.+++|+|.|++||.|.+..+++.++||++.. ...+.+.+|+.||+.|++||||++++++..+. ....
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeech------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 479999999999999999999999999999999853 35677999999999999999999999998764 4678
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|+||+.+.+.... ...|+...++.++.+++.||.|||+.||.|||+||.|++++. +.
T Consensus 112 LiFE~v~n~Dfk~l--------------------y~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh--~~ 169 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQL--------------------YPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH--EL 169 (338)
T ss_pred hHhhhhccccHHHH--------------------hhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech--hh
Confidence 99999987665332 256788999999999999999999999999999999999996 56
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCCCCC-CChhHHHHHHHh-
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLR- 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~Pf~~-~~~~~~~~~i~~- 329 (577)
..++|+|+|+|.+..++..++..+.+..|.-||.+- ..+...-|+|||||+|..|+..+.||.. .+..+.+-+|.+
T Consensus 170 rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV 249 (338)
T KOG0668|consen 170 RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV 249 (338)
T ss_pred ceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH
Confidence 789999999999999999999999999999999875 4567889999999999999999999854 333333322211
Q ss_pred ----------------CCC-------CCCCCCCC---------CCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 ----------------NKP-------DFRRKPWP---------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ----------------~~~-------~~~~~~~~---------~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
-.+ ...+.+|. -+++++.+|+.++|.+|..+|+||.|++.||||....
T Consensus 250 LGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 250 LGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred hChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 001 11222232 1568999999999999999999999999999998643
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=327.92 Aligned_cols=250 Identities=23% Similarity=0.323 Sum_probs=196.1
Q ss_pred CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCchhHH
Q 008127 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR 187 (577)
Q Consensus 108 ~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 187 (577)
++|.||++++..+++.||||++..... .......+.+|+.+++.+. ||||+++++++...+..|++|||+++|+|.++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~ 89 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPLMAYGSCEDL 89 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEeccCCCCHHHH
Confidence 445566666677999999999876532 2345678999999999995 99999999999999999999999999999887
Q ss_pred HHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCccc
Q 008127 188 ILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~ 267 (577)
+... ....+++..++.++.||+.||.|||+++|+||||||+||+++ .++.+||+|||.+...
T Consensus 90 l~~~---------------~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~~~~~~~ 151 (314)
T cd08216 90 LKTH---------------FPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGLRYSVSM 151 (314)
T ss_pred HHHh---------------cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecCccceee
Confidence 7533 224588999999999999999999999999999999999998 4688999999988654
Q ss_pred CCCCC--------ccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC--
Q 008127 268 KPGKK--------FQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF-- 334 (577)
Q Consensus 268 ~~~~~--------~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~-- 334 (577)
..... .....++..|+|||++.+ .++.++|||||||++|+|++|..||..............+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (314)
T cd08216 152 IKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLL 231 (314)
T ss_pred ccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCcccc
Confidence 32111 123467888999999865 36789999999999999999999997765443332222211100
Q ss_pred -----CC-----------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 335 -----RR-----------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 335 -----~~-----------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
+. .....++.++.+|+.+||..||++|||+.++|+||||+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 232 DKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred ccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 00 00012345788999999999999999999999999998654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=318.33 Aligned_cols=254 Identities=19% Similarity=0.284 Sum_probs=202.4
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCC--EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc------C
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------D 169 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~--~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------~ 169 (577)
|.+++.||+|+||.||+|.+..++. .||+|.+..... .....+.+.+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCC
Confidence 3567889999999999999877775 689998865422 234567789999999999 59999999997642 2
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
...++||||+++|+|.+++..... ......+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~- 146 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRL-----------GDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN- 146 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcc-----------cCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc-
Confidence 357899999999999887643210 01224589999999999999999999999999999999999997
Q ss_pred CCCCCCeeEEecCCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||+++........ ....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+..
T Consensus 147 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 224 (272)
T cd05075 147 --ENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIY 224 (272)
T ss_pred --CCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 4788999999999876433221 12346678999998865 45889999999999999999 89999887777766
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..+..+... ...+.++..+.++|.+||..||++|||+.+++++
T Consensus 225 ~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 225 DYLRQGNRL---KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 666554321 1224678899999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-39 Score=318.91 Aligned_cols=248 Identities=23% Similarity=0.303 Sum_probs=201.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.+|++.+.||.|+||.||+|.+..+|. .||+|.+.... .......+.+|+.++..+ +||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGV-GSPYVCRLLGICLTS-T 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcCC-C
Confidence 468999999999999999999877776 48999886543 234456788999999998 599999999988754 4
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++++||+++|+|.+.+... ...+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~----------------~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~--- 143 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVREN----------------KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK--- 143 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---
Confidence 78999999999998876432 35689999999999999999999999999999999999997
Q ss_pred CCCCeeEEecCCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+++........ ....+++.|+|||.+.+ .++.++|||||||++|||++ |..||...........
T Consensus 144 ~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~ 223 (279)
T cd05109 144 SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL 223 (279)
T ss_pred CCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 4678999999999876432221 12235678999998754 46889999999999999998 8999977666555544
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..... . ...+.++..+.+++.+||..||++||++.+++.
T Consensus 224 ~~~~~~-~--~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 224 LEKGER-L--PQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHCCCc-C--CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 443321 1 223467899999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=315.36 Aligned_cols=252 Identities=25% Similarity=0.361 Sum_probs=208.3
Q ss_pred eeecccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEec
Q 008127 102 KLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 178 (577)
+.||+|+||.||+|.+... +..||+|.+...... .....+.+|+.+++.+. ||||+++++++.....+++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE--EERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch--hHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEe
Confidence 3699999999999998866 889999998765432 24678899999999995 99999999999999999999999
Q ss_pred cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeE
Q 008127 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258 (577)
Q Consensus 179 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl 258 (577)
+++++|.+++....... .......+++..++.++.|++.||.|||++||+||||||+||+++ .++.+||
T Consensus 78 ~~~~~L~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~---~~~~~~l 146 (262)
T cd00192 78 MEGGDLLDYLRKSRPVF--------PSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG---EDLVVKI 146 (262)
T ss_pred ccCCcHHHHHhhccccc--------cccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC---CCCcEEE
Confidence 99999998775320000 001136789999999999999999999999999999999999998 4689999
Q ss_pred EecCCCcccCCCC---CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008127 259 TDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 259 ~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+|||.+....... ......+++.|+|||.+.. .++.++|||||||++|+|++ |..||......+....+.....
T Consensus 147 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~- 225 (262)
T cd00192 147 SDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR- 225 (262)
T ss_pred cccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-
Confidence 9999998765432 2334567889999998765 56889999999999999999 6999988877777777665322
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
......++.++.+++.+||..+|.+|||+.+++++
T Consensus 226 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 226 --LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred --CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 12224578999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=323.30 Aligned_cols=266 Identities=21% Similarity=0.311 Sum_probs=207.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcC-------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 167 (577)
..+|.+.+.||+|+||.||+|.+.. ....||+|.+.... .......+.+|+.+++++.+||||+++++++.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 3579999999999999999997632 34579999886542 23346678899999999966999999999999
Q ss_pred cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 168 DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+.+|+||||+++|+|.+++........ .............++...+..++.||+.||.|||++||+||||||+|||+
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 167 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGP-DYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV 167 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcc-cccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence 99999999999999999998865311000 00000001123468899999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDG 322 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~ 322 (577)
+ .++.+||+|||+++....... .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+
T Consensus 168 ~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 168 T---EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred c---CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 8 478899999999986543221 112234567999998765 45889999999999999999 899998887777
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..+..... ......++.++.+++.+||..+|.+|||+.++++
T Consensus 245 ~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 245 LFKLLREGHR---MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHcCCC---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 7766654321 1122457889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-39 Score=315.64 Aligned_cols=247 Identities=26% Similarity=0.354 Sum_probs=202.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++.+.||+|+||.||+|.+. .+..||+|.+..... ..+.+.+|+.+++++ +||||+++++++. ....|+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~l 77 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKL-RHDKLVQLYAVVS-EEPIYI 77 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhc-CCCceEEEEeEEC-CCCcEE
Confidence 357999999999999999999865 566799999876543 245689999999999 5999999999875 456889
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++... ....+++..+..++.|++.||.|||+.+|+||||||+||+++ .++
T Consensus 78 v~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~ 139 (260)
T cd05070 78 VTEYMSKGSLLDFLKDG---------------EGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGL 139 (260)
T ss_pred EEEecCCCcHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCc
Confidence 99999999999877432 234688999999999999999999999999999999999998 477
Q ss_pred CeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.++|+|||++........ .....++..|+|||.+.+ .++.++||||||+++|+|++ |..||.+....+....+...
T Consensus 140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~ 219 (260)
T cd05070 140 VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG 219 (260)
T ss_pred eEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 899999999976543221 122345668999998764 46889999999999999999 99999887777777666543
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. .......+..+.+|+.+||..+|.+|||+.++++
T Consensus 220 ~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 220 YR---MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred CC---CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 21 1222457889999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=330.93 Aligned_cols=268 Identities=24% Similarity=0.285 Sum_probs=203.4
Q ss_pred cceeeeeeecccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-C
Q 008127 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-D 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 169 (577)
++|++.+.||+|+||.||+|.+ ..+++.||||.+..... ......+.+|+.++.++.+||||+++++++.. +
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 4799999999999999999984 35678999999865432 23456788999999999779999999998765 4
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhh--------------hhHH---------------------------------
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLT--------------SAWF--------------------------------- 202 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--------------~~~~--------------------------------- 202 (577)
..+++|||||++|+|.+++.......... ..+.
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 56899999999999999886532100000 0000
Q ss_pred ---HhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---cccc
Q 008127 203 ---LAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDI 276 (577)
Q Consensus 203 ---~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~ 276 (577)
........++...+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++........ ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc---CCCcEEEEecccccccccCcchhhcCCC
Confidence 0000123578899999999999999999999999999999999998 478899999999976532221 1123
Q ss_pred ccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcc
Q 008127 277 VGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 354 (577)
Q Consensus 277 ~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l 354 (577)
.+++.|+|||++.+ .++.++|||||||++|+|++ |..||............+........+ ...++++.+++..||
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~cl 319 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP--DYTTPEMYQTMLDCW 319 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCC--CCCCHHHHHHHHHHc
Confidence 45678999998754 46889999999999999997 999997765443333333332222221 236789999999999
Q ss_pred ccCcCCCCCHHHHhcC
Q 008127 355 VKDPRARLTAAQALSH 370 (577)
Q Consensus 355 ~~dP~~Rpt~~~il~h 370 (577)
..||.+|||+.++++|
T Consensus 320 ~~~p~~Rps~~eil~~ 335 (343)
T cd05103 320 HGEPSQRPTFSELVEH 335 (343)
T ss_pred cCChhhCcCHHHHHHH
Confidence 9999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=323.50 Aligned_cols=266 Identities=23% Similarity=0.330 Sum_probs=210.3
Q ss_pred cceeeeeeecccCCeEEEEEEEc-------CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-------ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
.+|.+.+.||+|+||.||+|++. .++..||+|.+.... .......+.+|+.+++.+.+||||+++++++..
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 47999999999999999999753 234579999886432 133457789999999999669999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+.+|+||||+++|+|.+++....... ..............++...++.++.||+.||.|||++||+||||||+|||++
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~ 171 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPG-MEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT 171 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcc-cccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc
Confidence 999999999999999999886542110 0000001111234688899999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+.+..+.
T Consensus 172 ---~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 248 (304)
T cd05101 172 ---ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 248 (304)
T ss_pred ---CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 478899999999986643221 123346778999998765 46889999999999999998 8899988887777
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
...+...... .....++..+.+|+.+||..+|.+|||+.++++.
T Consensus 249 ~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 249 FKLLKEGHRM---DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHcCCcC---CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 7766544321 1224678999999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=353.47 Aligned_cols=256 Identities=23% Similarity=0.353 Sum_probs=216.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCC-----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
...-.+.+.||+|+||.||.|...... ..||||.+.+.. ......+|.+|..+|+.+ +|||||+++|++.+.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLDS 767 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCcceeeEEEeecCC
Confidence 346788899999999999999865432 248999886553 456788999999999999 699999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+..+|++|||+||+|..+|........ ....++..+.+.++.||+.|++||+++++|||||-..|+||+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~----------~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~- 836 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPF----------QPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD- 836 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccC----------CCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec-
Confidence 999999999999999999876422111 246799999999999999999999999999999999999999
Q ss_pred CCCCCCeeEEecCCCcccCCCCCcc---ccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
+...|||+|||+|+.+-....+. ...-...|||||.+. +.++.++|||||||+|||++| |..||.+.+..+++
T Consensus 837 --~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~ 914 (1025)
T KOG1095|consen 837 --ERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVL 914 (1025)
T ss_pred --ccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHH
Confidence 46899999999999654333221 112335799999886 678999999999999999999 99999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..++.+. . ..+++.++..+.++|..||+.+|++||++..|++
T Consensus 915 ~~~~~gg-R--L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 915 LDVLEGG-R--LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHhCC-c--cCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 8888876 3 3334678999999999999999999999999988
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=320.71 Aligned_cols=263 Identities=22% Similarity=0.310 Sum_probs=207.0
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.+|.+.+.||+|+||.||+|.+. .++..+|+|.+.... ......+.+|+.+++++ +||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNL-QHEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCC
Confidence 46899999999999999999754 345678999875443 23446788999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++||||+++++|.+++......... ............+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~-- 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMI-LVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG-- 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCccccc-ccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc--
Confidence 999999999999999988643110000 00000011234589999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||......+...
T Consensus 158 -~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 236 (291)
T cd05094 158 -ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 236 (291)
T ss_pred -cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 478999999999976543221 123456888999998764 45889999999999999998 999998877777666
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..+.... .....+..+.+++.+||..+|.+|||+.++++
T Consensus 237 ~~~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 237 CITQGRVLE---RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHhCCCCCC---CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 655443221 22346889999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-39 Score=318.98 Aligned_cols=262 Identities=20% Similarity=0.295 Sum_probs=207.5
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|.+.++||+|+||.||+|... .++..+|+|.+.... ......+.+|+++++.+ +||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVL-QHQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcC-CCCCCceEEEEEecCC
Confidence 46888999999999999999743 356789999876543 34567899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++||||+++|+|.+++.......... ..........+++..++.++.||+.||.|||+.||+||||||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~-- 156 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKIL--AGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG-- 156 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhh--cccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc--
Confidence 9999999999999999886432110000 000011124588999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
+++.+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |.+||......+...
T Consensus 157 -~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 235 (280)
T cd05092 157 -QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIE 235 (280)
T ss_pred -CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHH
Confidence 478899999999875533221 123345788999998764 45889999999999999998 999998877777766
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+...... .....+++.+.+||.+||+.||.+||++.++++
T Consensus 236 ~~~~~~~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 236 CITQGREL---ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHcCccC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 66554322 122457899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=332.83 Aligned_cols=316 Identities=22% Similarity=0.321 Sum_probs=239.3
Q ss_pred CCCCccccchhHHHhhhccccCCCCCccchhhHHHHHHHhhhHHHHhhhhcccccccccccCCCCCCCccccccccceee
Q 008127 21 NANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTI 100 (577)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 100 (577)
.+-|+++......+-+.....++.+.....|+|..-+..+.........+.+...--++.|.- ..|... ..+...
T Consensus 197 RVyHYRINt~~dgK~yvt~EsrF~TLaELVHHHStvADGLittLhYPApK~nKptvygvSPn~--DkWEme---RtdItM 271 (1157)
T KOG4278|consen 197 RVYHYRINTDNDGKMYVTQESRFRTLAELVHHHSTVADGLITTLHYPAPKKNKPTVYGVSPNA--DKWEME---RTDITM 271 (1157)
T ss_pred eEEEEEeeccCCccEEEeehhhhhHHHHHHhhccccccceeEeeeccCccCCCCceeeecCCc--chhhcc---chheee
Confidence 344555555555555555555555555556665554444333222222222111111121211 111111 124556
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
..+||-|.||.||.|.+++-.-.||||.++...+ ..++|+.|..+|+.+. |||+|+|+++|..+..+|||+|||.
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM----eveEFLkEAAvMKeik-HpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcch----hHHHHHHHHHHHHhhc-CccHHHHhhhhccCCCeEEEEeccc
Confidence 7789999999999999999999999999976654 6789999999999995 9999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
.|+|+++|... ....++.-..++++.||..|++||..+++|||||-..|+|+. ++..||++|
T Consensus 347 yGNLLdYLRec---------------nr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg---EnhiVKvAD 408 (1157)
T KOG4278|consen 347 YGNLLDYLREC---------------NRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHIVKVAD 408 (1157)
T ss_pred CccHHHHHHHh---------------chhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc---ccceEEeec
Confidence 99999999765 334566777889999999999999999999999999999998 689999999
Q ss_pred cCCCcccCCCCCccccccC---Cccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008127 261 FGLSDFIKPGKKFQDIVGS---AYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 335 (577)
Q Consensus 261 FGla~~~~~~~~~~~~~gt---~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~ 335 (577)
|||++++.. ..+....|. .-|.|||.+. ..++.++|||+|||+|||+.| |..||.+-+...+|..+-++ |+
T Consensus 409 FGLsRlMtg-DTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg---yR 484 (1157)
T KOG4278|consen 409 FGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG---YR 484 (1157)
T ss_pred cchhhhhcC-CceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc---cc
Confidence 999998864 344444453 4599999775 567999999999999999998 99999998887777655443 23
Q ss_pred CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 336 ~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
......+++.+.+|+..||+++|.+||++.++-
T Consensus 485 M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 485 MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 334478999999999999999999999998874
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=317.41 Aligned_cols=248 Identities=21% Similarity=0.306 Sum_probs=198.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.+|++.+.||+|+||.||+|.+..+|. .||+|.+.... .......+..|+.++.++ +||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSL-DHAYIVRLLGICPG-AS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcC-CCCCcceEEEEECC-Cc
Confidence 368999999999999999999887776 47777764322 123456778888888888 59999999998764 45
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++|+||+++|+|.+++... ...+++..+..++.||+.||.|||+.+++||||||+|||++
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~--- 143 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQH----------------RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK--- 143 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhc----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---
Confidence 78899999999999877532 35689999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+++....... .....++..|+|||.+. +.++.++|||||||++|||++ |..||.+.........
T Consensus 144 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~ 223 (279)
T cd05111 144 SDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL 223 (279)
T ss_pred CCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 478899999999986543221 23345778899999875 456899999999999999998 9999988766654444
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..+. .... ....+..+.+++.+||..||.+|||+.++++
T Consensus 224 ~~~~~-~~~~--~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 224 LEKGE-RLAQ--PQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred HHCCC-cCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 43322 2221 2335678999999999999999999999866
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=315.62 Aligned_cols=248 Identities=24% Similarity=0.386 Sum_probs=204.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+|++.+.||+|+||.||+|.++.+++ .||||.+.... .......+..|+.+++.+ +||||+++++++..++.++
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCCceE
Confidence 58999999999999999999887665 59999886532 234567899999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+++|+|.+++... ...++...++.++.|++.||.|||++|++||||||+||+++ .+
T Consensus 82 lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~---~~ 142 (269)
T cd05065 82 IITEFMENGALDSFLRQN----------------DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVN---SN 142 (269)
T ss_pred EEEecCCCCcHHHHHhhC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEc---CC
Confidence 999999999998866432 35688999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCc---cccc---cCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKKF---QDIV---GSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~---~~~~---gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
+.+||+|||++......... .... ++..|+|||.+.+ .++.++|||||||++|||++ |..||+.....+...
T Consensus 143 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~ 222 (269)
T cd05065 143 LVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIN 222 (269)
T ss_pred CcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence 88999999998765432211 1111 2457999998764 45889999999999999886 999999887777766
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+... ...+..+.++..+.+++.+||..+|.+||++.+++.
T Consensus 223 ~i~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 223 AIEQD---YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred HHHcC---CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 66433 122223567889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=317.40 Aligned_cols=256 Identities=27% Similarity=0.457 Sum_probs=208.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
+|.+.+.||.|+||.||++.+..++..+++|.+..... ........+..|+.+++.+ +||||+++++++.+....++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceEE
Confidence 58999999999999999999988877777776543221 1122334567899999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+.+... ......+++..++.++.|++.||.|||+.|++|+||||+||+++ ++
T Consensus 80 v~e~~~~~~l~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~ 142 (260)
T cd08222 80 ITEYCEGRDLDCKLEEL-------------KHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NN 142 (260)
T ss_pred EEEeCCCCCHHHHHHHH-------------hhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cC
Confidence 99999999998877432 11346789999999999999999999999999999999999997 35
Q ss_pred CeeEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++........ .....|++.|+|||.+.+ .++.++|+||||+++|+|++|..||.+.........+..+..
T Consensus 143 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 222 (260)
T cd08222 143 LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPT 222 (260)
T ss_pred CEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCC
Confidence 699999999876643322 234568999999998764 357789999999999999999999987766666666554322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.. ....++.++.++|.+||..+|.+||++.++++||||
T Consensus 223 ~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 223 PS---LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred CC---CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 21 123577899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=312.89 Aligned_cols=243 Identities=23% Similarity=0.348 Sum_probs=201.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEE-EcCCeEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF-EDDNYVYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~-~~~~~~~l 174 (577)
.+|++.+.||+|+||.||++.. .|..||+|.+.... ..+.+.+|+.+++++ +|||++++++++ ...+.+|+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc-----hHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCceEE
Confidence 3689999999999999999964 47889999885432 345688999999999 599999999975 45667999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++ .++
T Consensus 78 v~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~ 139 (256)
T cd05082 78 VTEYMAKGSLVDYLRSR---------------GRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS---EDN 139 (256)
T ss_pred EEECCCCCcHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc---CCC
Confidence 99999999999877533 224578999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++....... ....++..|+|||++.+. ++.++|||||||++|+|++ |+.||......+....+..+..
T Consensus 140 ~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~ 217 (256)
T cd05082 140 VAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 217 (256)
T ss_pred cEEecCCccceeccccC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC
Confidence 99999999987654322 233456789999987654 5889999999999999997 9999988777776666654422
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
....+.+++.+.+++.+||..+|.+|||+.++++
T Consensus 218 ---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 218 ---MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred ---CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 2223567899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=312.91 Aligned_cols=241 Identities=21% Similarity=0.295 Sum_probs=195.9
Q ss_pred eecccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++++ +||||+++++++.. ..+++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~-~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQL-DNPYIVRMIGVCEA-EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcC-CCeEEEEEeCC
Confidence 3899999999999765 445679999886542 234456789999999999 59999999998864 46899999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++... ...+++..++.++.||+.||.|||++|++||||||+|||++ .++.+||+|
T Consensus 78 ~~~L~~~l~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~d 138 (257)
T cd05115 78 GGPLNKFLSGK----------------KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---NQHYAKISD 138 (257)
T ss_pred CCCHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---CCCcEEecc
Confidence 99998876422 35689999999999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCCCc----cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008127 261 FGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 261 FGla~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||++......... ....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+..+...
T Consensus 139 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~- 217 (257)
T cd05115 139 FGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL- 217 (257)
T ss_pred CCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-
Confidence 9999765433221 11233578999998764 45889999999999999996 99999888777776666554321
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+..++++.++|.+||..+|++||++.++++
T Consensus 218 --~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 218 --DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred --CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 122457899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=313.60 Aligned_cols=246 Identities=25% Similarity=0.351 Sum_probs=201.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+.+++.+ +||||+++++++.. +..|+|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKL-RHDKLVPLYAVVSE-EPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhC-CCCCeeeEEEEEcC-CCcEEE
Confidence 5799999999999999999987654 4699998765432 345688999999999 59999999998754 568899
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ....+++..+..++.||+.||.|||+.||+||||||+||+++ .++.
T Consensus 79 ~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~---~~~~ 140 (260)
T cd05069 79 TEFMGKGSLLDFLKEG---------------DGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG---DNLV 140 (260)
T ss_pred EEcCCCCCHHHHHhhC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCe
Confidence 9999999999877532 234578899999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
++|+|||++........ .....++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 141 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~ 220 (260)
T cd05069 141 CKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY 220 (260)
T ss_pred EEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 99999999976543221 123346778999998764 46889999999999999999 999998887777776665432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
. ......++..+.+++.+||..||.+||++.++++
T Consensus 221 ~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 221 R---MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred C---CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1 1223467899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=320.55 Aligned_cols=254 Identities=30% Similarity=0.508 Sum_probs=208.5
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|++.+.||.|+||.||+|.+..+++.||+|.+..... .......+..|+.+++.+. ||||+++++++...+.+++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-EEGIPSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc-cccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEec
Confidence 5677889999999999999999999999999876531 1233466788999999995 9999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|++ ++|.+.+... ...+++..+..++.|++.||.|||++||+||||+|+||+++ .++.+|
T Consensus 79 ~~~-~~l~~~i~~~----------------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~---~~~~~~ 138 (282)
T cd07829 79 YCD-MDLKKYLDKR----------------PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN---RDGVLK 138 (282)
T ss_pred CcC-cCHHHHHHhh----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc---CCCCEE
Confidence 997 5888877532 14689999999999999999999999999999999999998 478999
Q ss_pred EEecCCCcccCCCC-CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC--
Q 008127 258 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP-- 332 (577)
Q Consensus 258 l~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~-- 332 (577)
|+|||++....... ......++..|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+.....
T Consensus 139 l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (282)
T cd07829 139 LADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTP 218 (282)
T ss_pred EecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCC
Confidence 99999997664332 2334567888999998754 458899999999999999999999988776655544432110
Q ss_pred ----------------CCC-------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 333 ----------------DFR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 333 ----------------~~~-------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.++ ...++.++..+.++|.+||..||.+||++.+++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 219 TEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 000 01234567889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=348.99 Aligned_cols=254 Identities=31% Similarity=0.484 Sum_probs=198.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-------
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------- 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------- 168 (577)
.+|+.++.||+||||.||+|+++-+|+.||||+|.... .......+.+|+.+|.+| +|||||++|..|.+
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARL-NHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhc-CCcceeeeehhhhccCCcccc
Confidence 46788999999999999999999999999999997654 345667789999999999 69999999765400
Q ss_pred --------------------------------------------------------------------------------
Q 008127 169 -------------------------------------------------------------------------------- 168 (577)
Q Consensus 169 -------------------------------------------------------------------------------- 168 (577)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCC-CHHH
Q 008127 169 ------------------------D--------NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY-TEKD 215 (577)
Q Consensus 169 ------------------------~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l-~~~~ 215 (577)
+ -.+||-||||+...|.+.+.++ ... ....
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N-----------------~~~~~~d~ 698 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN-----------------HFNSQRDE 698 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc-----------------ccchhhHH
Confidence 0 1478889999876665555433 222 3567
Q ss_pred HHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccC-------------------CCCCcccc
Q 008127 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------------------PGKKFQDI 276 (577)
Q Consensus 216 ~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~-------------------~~~~~~~~ 276 (577)
+++++.+|++||.|+|++|||||||||.||+|+ .+..|||+|||+|+... +....+..
T Consensus 699 ~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd---~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~ 775 (1351)
T KOG1035|consen 699 AWRLFREILEGLAYIHDQGIIHRDLKPRNIFLD---SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQ 775 (1351)
T ss_pred HHHHHHHHHHHHHHHHhCceeeccCCcceeEEc---CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccc
Confidence 899999999999999999999999999999999 47889999999998621 01134567
Q ss_pred ccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHH
Q 008127 277 VGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 351 (577)
Q Consensus 277 ~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 351 (577)
+||..|+|||++.+ .|+.|+|||||||||+||+. ||....+ ..++..+..+..+.+...+..--+.-..+|.
T Consensus 776 VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~ 852 (1351)
T KOG1035|consen 776 VGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIR 852 (1351)
T ss_pred cceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHH
Confidence 89999999999863 57899999999999999996 5744333 3344444444333332222223345679999
Q ss_pred HccccCcCCCCCHHHHhcCccccc
Q 008127 352 KLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 352 ~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.||..||.+||||.++|++.||-.
T Consensus 853 ~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 853 WLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred HHhcCCCccCCCHHHHhhccCCCc
Confidence 999999999999999999999975
|
|
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=312.63 Aligned_cols=248 Identities=25% Similarity=0.382 Sum_probs=206.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|.+.+.||+|+||.||+|.+. .++.||||.+..... ..+.+.+|+.+++.+ +||||+++++++......++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 78 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKL-RHDKLVQLYAVCSEEEPIYI 78 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhC-CCCCEeeeeeeeecCCceEE
Confidence 357999999999999999999875 557899999876543 346788999999999 49999999999999899999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++... ....++...+..++.||+.||.|||++|++|+||||+||+++ .++
T Consensus 79 v~e~~~~~~L~~~i~~~---------------~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~ 140 (261)
T cd05034 79 VTEYMSKGSLLDFLKSG---------------EGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENL 140 (261)
T ss_pred EEeccCCCCHHHHHhcc---------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCC
Confidence 99999999998877432 234688999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.+||+|||++........ .....++..|+|||.+.+ .++.++|||||||++|+|++ |+.||.+......+..+...
T Consensus 141 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~ 220 (261)
T cd05034 141 VCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG 220 (261)
T ss_pred CEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 999999999876643211 112234568999998865 45889999999999999998 99999888777777776654
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. .......+.++.+++.+||..+|.+||++.++++
T Consensus 221 ~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 221 YR---MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred CC---CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 22 1222456889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=311.70 Aligned_cols=241 Identities=22% Similarity=0.312 Sum_probs=197.5
Q ss_pred eeecccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEec
Q 008127 102 KLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 178 (577)
+.||+|+||.||+|.+..++ ..||+|.+...... .....+.+|+.+++.+ +||||+++++++.. +.+++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQL-DHPCIVRLIGVCKG-EPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhc-CCCCeeeEEEEEcC-CceEEEEEe
Confidence 46999999999999876554 78999998765432 3456789999999999 59999999998764 468999999
Q ss_pred cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeE
Q 008127 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258 (577)
Q Consensus 179 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl 258 (577)
+++|+|.+++... ..+++..+..++.|++.||.|||..+++||||||+|||++ .++.+||
T Consensus 77 ~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~---~~~~~kl 136 (257)
T cd05060 77 APLGPLLKYLKKR-----------------REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV---NRHQAKI 136 (257)
T ss_pred CCCCcHHHHHHhC-----------------CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc---CCCcEEe
Confidence 9999999877432 4689999999999999999999999999999999999998 4788999
Q ss_pred EecCCCcccCCCCCcc----ccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 259 TDFGLSDFIKPGKKFQ----DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 259 ~DFGla~~~~~~~~~~----~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+|||++.......... ...++..|+|||.+.+ .++.++|||||||++|+|++ |..||...+..+....+.....
T Consensus 137 ~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~ 216 (257)
T cd05060 137 SDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER 216 (257)
T ss_pred ccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc
Confidence 9999998664433211 1223567999998764 45889999999999999998 9999988777666666654432
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
. .....++..+.++|.+||..+|.+|||+.++++
T Consensus 217 ~---~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 217 L---PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred C---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 1 223457899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=341.85 Aligned_cols=356 Identities=20% Similarity=0.257 Sum_probs=224.7
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCC----CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEE-----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKAN----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNA----- 165 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~----~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~----- 165 (577)
.++|.+.+.||+|+||.||+|++..+ +..||||++.... ..+.+..| .+... .+.+++.++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~-----~~e~~~~e--~l~~~-~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG-----AVEIWMNE--RVRRA-CPNSCADFVYGFLEPV 202 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc-----hhHHHHHH--HHHhh-chhhHHHHHHhhhccc
Confidence 35799999999999999999999988 8999999875432 11111111 11222 12233222211
Q ss_pred -EEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhh---HHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCC
Q 008127 166 -FEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA---WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 241 (577)
Q Consensus 166 -~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlK 241 (577)
...+..+++||||+++++|.+.+............ ....+..........+..++.||+.||.|||+++|+|||||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 24566799999999999999887643211000000 00011112223455677899999999999999999999999
Q ss_pred CCcEEeecCCCCCCeeEEecCCCcccCCCC--CccccccCCccccchhccc-----------------------CCCCCC
Q 008127 242 PENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-----------------------KSGPES 296 (577)
Q Consensus 242 p~NILl~~~~~~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-----------------------~~~~~~ 296 (577)
|+|||++. .++.+||+|||+|+.+.... .....+||+.|+|||.+.. .+..++
T Consensus 283 P~NILl~~--~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 283 PQNIIFSE--GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred HHHEEEeC--CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 99999984 35789999999998654332 2345789999999996532 123456
Q ss_pred chhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC-CCC-----------CCC------CCCCCCCHHHHHHHHHccccCc
Q 008127 297 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN-KPD-----------FRR------KPWPSISNSAKDFVKKLLVKDP 358 (577)
Q Consensus 297 DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~-~~~-----------~~~------~~~~~~s~~~~~li~~~l~~dP 358 (577)
|||||||+||||+++..|+... ...+...+.. ... ... ..+...+....+||.+||++||
T Consensus 361 DVwSlGviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 9999999999999977665321 1112111111 000 000 0001122345699999999999
Q ss_pred CCCCCHHHHhcCccccccCCCCCCcccHHHHHhhHHhhhhhhhhHHHHHhhccccchHHHhhhccccccccCCCCCCCCH
Q 008127 359 RARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISL 438 (577)
Q Consensus 359 ~~Rpt~~~il~hp~f~~~~~~~~~~~~~~~~~~lk~~~~~s~l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~ 438 (577)
.+|||+.++|+||||+....... ..++++.. .. ... ..... .+-.+.+...+..-+++.+|-++.
T Consensus 439 ~kR~ta~e~L~Hpff~~~~~~~~-----~~~~~~~~---~~-~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e 503 (566)
T PLN03225 439 RQRISAKAALAHPYFDREGLLGL-----SVMQNLRL---QL-FRA-----TQQDY-GEAAAWVVFLMAKSGTEKEGGFTE 503 (566)
T ss_pred ccCCCHHHHhCCcCcCCCCcccc-----cccccccc---cc-chh-----hHHHH-HHHHHHHHHHHHhcCCCCCCCccH
Confidence 99999999999999987654211 11111100 00 000 00000 011223334444557778899999
Q ss_pred HHHHHHHHhhCCCCccHHHHH--HHHHhhcCCCCcceehhhHHH
Q 008127 439 EEMRQALAKDLPWKLKESRVL--EILQAIDCNTDGLVDFSEFVA 480 (577)
Q Consensus 439 ~el~~~l~~~~~~~~~~~~~~--~~~~~~D~d~dg~i~f~EF~~ 480 (577)
.+|..+... + ...+...+ .+....+.+..|..++.+++.
T Consensus 504 ~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (566)
T PLN03225 504 AQLQELREK--E-PKKKGSAQRNALASALRLQRKGVKTVARTVD 544 (566)
T ss_pred HHHHHhhhh--c-CcchhhhhhhhHHHHHhhhhhhhhhhhhhhh
Confidence 999988743 3 22333343 488888999999999999975
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=319.69 Aligned_cols=263 Identities=20% Similarity=0.265 Sum_probs=203.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC--------------CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG--------------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~--------------~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 161 (577)
++|++.+.||+|+||.||+|++..++ ..||+|.+.... .......+.+|+++++++ +||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~i~~ 81 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRL-KNPNIIR 81 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhC-CCCCcCe
Confidence 47999999999999999999875432 358999886542 234556789999999999 5999999
Q ss_pred EEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCC
Q 008127 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 241 (577)
Q Consensus 162 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlK 241 (577)
+++++...+..++||||+++++|.+++......... ........+++..+..++.|++.||.|||++|++|||||
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlk 156 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTF-----THANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLA 156 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccc-----cccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccC
Confidence 999999999999999999999999987543110000 001112347888999999999999999999999999999
Q ss_pred CCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh--CCCCC
Q 008127 242 PENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC--GRRPF 315 (577)
Q Consensus 242 p~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t--g~~Pf 315 (577)
|+||+++ .++.+||+|||++........ .....++..|+|||++. +.++.++|||||||++|+|++ |..||
T Consensus 157 p~Nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~ 233 (295)
T cd05097 157 TRNCLVG---NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPY 233 (295)
T ss_pred hhhEEEc---CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCC
Confidence 9999998 467899999999976543221 12234577899999765 456899999999999999988 67888
Q ss_pred CCCChhHHHHHHHhC----CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 316 WDKTEDGIFKEVLRN----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 316 ~~~~~~~~~~~i~~~----~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+..+....+... .........+.+++.+.+|+.+||..||.+|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 234 SLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred cccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 776666555444221 111111123457889999999999999999999999965
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=318.60 Aligned_cols=264 Identities=24% Similarity=0.297 Sum_probs=204.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+|++.+.||+|+||.||+|.+.. ....+|+|.+..... ......+.+|+.+++.+ +||||+++++.+...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCC
Confidence 37889999999999999998753 235688888764432 23456789999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhh-------hhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCc
Q 008127 172 VYIAMELCEGGELLDRILAKMISTT-------LTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~N 244 (577)
.++|+||+++|+|.+++........ ..............+++..++.++.|++.||.|||+++|+||||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 9999999999999988754210000 000000111223468899999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCC
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKT 319 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~ 319 (577)
||++ .++.+||+|||+++....... .....++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+..
T Consensus 158 ill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 158 VLVA---EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred EEEc---CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9998 477899999999976533221 123356778999998754 45889999999999999998 999998877
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 320 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+...+.... . ......++.++.+|+.+||..+|.+||++.++++
T Consensus 235 ~~~~~~~~~~~~-~--~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 235 PERLFNLLKTGY-R--MERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHHHhCCC-C--CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 766665544322 1 2223457899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=316.71 Aligned_cols=248 Identities=25% Similarity=0.349 Sum_probs=194.1
Q ss_pred cce-eeeeeecccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--
Q 008127 96 RRY-TIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-- 168 (577)
Q Consensus 96 ~~y-~~~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-- 168 (577)
++| ++.+.||+|+||+||++. ...++..||+|.+..... ......+.+|+++++.+ +||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTL-YHENIVKYKGCCSEQG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCC
Confidence 345 999999999999998865 345788999999865421 23456788999999999 59999999998765
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...+++||||+++|+|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~------------------~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~ 141 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPK------------------HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD 141 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHH------------------cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc
Confidence 3468999999999999887632 3589999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh--
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-- 321 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-- 321 (577)
.++.+||+|||++........ .....++..|+|||++.+ ..+.++|||||||++|+|++|..||......
T Consensus 142 ---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~ 218 (283)
T cd05080 142 ---NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE 218 (283)
T ss_pred ---CCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh
Confidence 468899999999987643322 122345677999998764 4688999999999999999999998543211
Q ss_pred H------------HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 322 G------------IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 322 ~------------~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+ ............ .....++.++.+++.+||..+|.+|||+.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 219 EMIGPKQGQMTVVRLIELLERGMRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hhhcccccccchhhhhhhhhcCCCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 011111111111 112356789999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=324.39 Aligned_cols=266 Identities=23% Similarity=0.327 Sum_probs=208.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC-------CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN-------GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~-------~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
.+|++++.||+|+||.||+|++... +..||+|.+.... .......+.+|+.+++++.+||||+++++++..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 4799999999999999999986432 2368999876432 233567789999999999669999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+.+++||||+++|+|.+++....... ..............++...+..++.||+.||.|||++||+||||||+|||++
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~ 168 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPG-MDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT 168 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcc-cccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc
Confidence 999999999999999999886531100 0000000011234588889999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
.++.+||+|||+++........ ....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+.+..+.
T Consensus 169 ---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 245 (334)
T cd05100 169 ---EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 245 (334)
T ss_pred ---CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 4788999999999765432211 12234567999998765 46889999999999999998 8999988887777
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
...+..... .......+.++.+|+.+||..+|.+|||+.+++++
T Consensus 246 ~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 246 FKLLKEGHR---MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHcCCC---CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 776655322 11224578899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=312.86 Aligned_cols=249 Identities=22% Similarity=0.351 Sum_probs=204.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+|+..+.||+|+||.||+|.+..++. .+|+|.+.... .....+.+.+|+.+++.+ +||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCCCc
Confidence 368889999999999999999876665 79999886542 133456789999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++++|.+++... ...+++..+..++.|++.||.|||+.|++||||||+||+++ .
T Consensus 82 ~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~---~ 142 (268)
T cd05063 82 MIITEYMENGALDKYLRDH----------------DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN---S 142 (268)
T ss_pred EEEEEcCCCCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc---C
Confidence 9999999999998876432 35689999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCC--cc--ccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKK--FQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~--~~--~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
++.+||+|||++........ .. ....++.|+|||++.+ .++.++|||||||++|+|++ |..||+..+..+....
T Consensus 143 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~ 222 (268)
T cd05063 143 NLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKA 222 (268)
T ss_pred CCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHH
Confidence 77899999999876543221 11 1223457999998764 46889999999999999997 9999988887777777
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+.... ..+....++.++.+++.+||..+|.+||++.++++
T Consensus 223 i~~~~---~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 223 INDGF---RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred HhcCC---CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 65432 12222457889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=314.47 Aligned_cols=248 Identities=23% Similarity=0.298 Sum_probs=205.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.+|++.+.||+|+||.||+|.++.+|. .||+|.+..... ......+.+|+.++.++ +||||+++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASV-DHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-Cc
Confidence 479999999999999999999877665 589998765532 34567789999999999 59999999999887 78
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~--- 143 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNH----------------KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK--- 143 (279)
T ss_pred eEEEEecCCCCcHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc---
Confidence 99999999999999877532 34589999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCCcc---ccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||++.......... ...++..|+|||.+. +.++.++|||||||++|+|++ |+.||.+....++...
T Consensus 144 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~ 223 (279)
T cd05057 144 TPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDL 223 (279)
T ss_pred CCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 47789999999998765333211 122456799999876 456889999999999999998 9999988877777766
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..+.. ... ....+..+.+++.+||..+|.+|||+.++++
T Consensus 224 ~~~~~~-~~~--~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 224 LEKGER-LPQ--PPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HhCCCC-CCC--CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 665432 111 2346788999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=310.31 Aligned_cols=244 Identities=24% Similarity=0.363 Sum_probs=203.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||.|+||.||+|.. .|+.||+|.+..... ..+.+.+|+.+++.+ +||||+++++++.+....++|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST----AAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh----HHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeEEE
Confidence 4689999999999999999975 488999999865532 467789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++... ....+++..++.++.|++.||.|||++|++||||||+||+++ .++.
T Consensus 79 ~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~---~~~~ 140 (256)
T cd05039 79 TEYMAKGSLVDYLRSR---------------GRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLV 140 (256)
T ss_pred EEecCCCcHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe---CCCC
Confidence 9999999998877433 123689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||.+....... ....++..|+|||.+. +.++.++||||||+++|+|++ |..||...+..+....+.....
T Consensus 141 ~~l~d~g~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~- 217 (256)
T cd05039 141 AKVSDFGLAKEASQGQ--DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR- 217 (256)
T ss_pred EEEccccccccccccc--ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC-
Confidence 9999999998763222 2334566799999876 456889999999999999997 9999988777666655544321
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
......+++.+.++|.+||..+|.+|||+.++++
T Consensus 218 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 218 --MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred --CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 1222457899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=309.80 Aligned_cols=248 Identities=27% Similarity=0.409 Sum_probs=206.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCC----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+++.+.||.|+||.||+|.+..++ ..||+|.+..... ......+..|+.+++.+ +||||+++++++...+..|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeE
Confidence 356788999999999999988766 8999999865432 22567889999999999 6999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
++|||+++++|.+.+... ....+++..+..++.||+.||.|||+.+++||||||+||+++ .+
T Consensus 78 ~i~e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~---~~ 139 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKN---------------RPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG---EN 139 (258)
T ss_pred EEEeccCCCCHHHHHHhh---------------hhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc---cC
Confidence 999999999998877543 112289999999999999999999999999999999999998 46
Q ss_pred CCeeEEecCCCcccCCCCCcc--ccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
+.++|+|||++.......... ...+++.|+|||.+.+ .++.++|||||||++|+|++ |..||...+.......+..
T Consensus 140 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~ 219 (258)
T smart00219 140 LVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKK 219 (258)
T ss_pred CeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc
Confidence 789999999998765432222 1337789999998754 46889999999999999998 8999988777777777765
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..... ....++.++.+++.+||..+|.+|||+.++++
T Consensus 220 ~~~~~---~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 220 GYRLP---KPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred CCCCC---CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 54322 22347899999999999999999999999986
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=317.35 Aligned_cols=262 Identities=19% Similarity=0.250 Sum_probs=203.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcC----------------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA----------------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~----------------~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 159 (577)
++|++.+.||.|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+ +||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l-~~~~i 81 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRL-KDPNI 81 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCc
Confidence 579999999999999999986432 34579999886542 233457789999999999 59999
Q ss_pred eEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceecc
Q 008127 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239 (577)
Q Consensus 160 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrD 239 (577)
+++++++...+.+++||||+++|+|.+++......... .......+++..+..++.||+.||.|||+.||+|||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d 155 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAA------EKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRD 155 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCccccc------ccccccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 99999999999999999999999999888653211100 011234578899999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh--CCC
Q 008127 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC--GRR 313 (577)
Q Consensus 240 lKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t--g~~ 313 (577)
|||+|||++ .++.++|+|||++..+..... .....+++.|+|||+.. +.++.++|||||||++|||++ |..
T Consensus 156 lkp~Nili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~ 232 (296)
T cd05095 156 LATRNCLVG---KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQ 232 (296)
T ss_pred CChheEEEc---CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCC
Confidence 999999998 478899999999986543221 12234567899999754 556899999999999999998 789
Q ss_pred CCCCCChhHHHHHHHh---C-CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 314 PFWDKTEDGIFKEVLR---N-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~---~-~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
||...+..+....... . ......+..+.+++.+.+|+.+||..||.+|||+.++++
T Consensus 233 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 233 PYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred CccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9977766555443321 1 111111122457789999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=316.59 Aligned_cols=265 Identities=19% Similarity=0.238 Sum_probs=208.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++.+.||.|+||.||+|.+.. ++..||+|.+.... .......+.+|+.++..+ +||||+++++++..+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DHPNIVKLLGVCAVGK 81 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCC
Confidence 479999999999999999998753 67899999886542 233456789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhh-----hHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcE
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTS-----AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 245 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NI 245 (577)
.+++||||+++|+|.+++........... ...........+++..++.++.||+.||.|||+++++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 99999999999999998864321100000 0000111224578999999999999999999999999999999999
Q ss_pred EeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCCh
Q 008127 246 LFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTE 320 (577)
Q Consensus 246 Ll~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~ 320 (577)
+++ .++.+||+|||++........ .....++..|+|||.+. ..++.++|||||||++|+|++ |..||.+...
T Consensus 162 l~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 162 LVG---ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred Eec---CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 997 478899999999875432221 12234567799999876 456889999999999999997 8899988887
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+....+..+... ...+.++.++.+||.+||..+|.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 239 EEVIYYVRDGNVL---SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 7777766554321 112457889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=312.61 Aligned_cols=248 Identities=20% Similarity=0.282 Sum_probs=192.7
Q ss_pred eecccCCeEEEEEEEcC--CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~--~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.+ +||||+++++.+.....+|+||||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEeCC
Confidence 59999999999996432 44578888875432 233456788999999998 59999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++..... .....+++..+..++.||+.||.|||+++|+||||||+|||++ .++.+||+|
T Consensus 79 ~g~L~~~l~~~~~------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~d 143 (269)
T cd05042 79 LGDLKNYLRSNRG------------MVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT---ADLSVKIGD 143 (269)
T ss_pred CCcHHHHHHhccc------------cccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec---CCCcEEEec
Confidence 9999998754310 0123356778899999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCCC---ccccccCCccccchhccc--------CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 261 FGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 261 FGla~~~~~~~~---~~~~~gt~~y~aPE~~~~--------~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
||++........ .....+++.|+|||++.. .++.++|||||||++|+|++ |..||......+.+..+.
T Consensus 144 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 223 (269)
T cd05042 144 YGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVV 223 (269)
T ss_pred cccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh
Confidence 999865432211 123356778999998742 34778999999999999999 788988777666666554
Q ss_pred hCC-CCCCCCC-CCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 329 RNK-PDFRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 329 ~~~-~~~~~~~-~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... ...+.+. ...+++.+.+++..|| .||++|||++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 224 REQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred hccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 432 2222221 2357788999999998 59999999999876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=311.08 Aligned_cols=249 Identities=18% Similarity=0.278 Sum_probs=193.3
Q ss_pred eeecccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEecc
Q 008127 102 KLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 179 (577)
+.||+|+||.||+|... .++..+|+|.+..... ......+.+|+.+++++ +||||+++++++.+...+++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEECC
Confidence 35999999999999754 3556899998865432 23345788899999999 5999999999999989999999999
Q ss_pred CCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEE
Q 008127 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259 (577)
Q Consensus 180 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~ 259 (577)
++|+|.+++..... ......+...+..++.|++.||.|||+.+++||||||+||+++ .++.+||+
T Consensus 78 ~~g~L~~~l~~~~~------------~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~ 142 (269)
T cd05087 78 PLGDLKGYLRSCRK------------AELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIG 142 (269)
T ss_pred CCCcHHHHHHHhhh------------cccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEEC
Confidence 99999988754311 0123456778889999999999999999999999999999998 47889999
Q ss_pred ecCCCcccCCCCC---ccccccCCccccchhccc--------CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008127 260 DFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 260 DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~--------~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i 327 (577)
|||++........ .....|++.|+|||++.+ .++.++|||||||++|+|++ |..||......+.....
T Consensus 143 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~ 222 (269)
T cd05087 143 DYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYT 222 (269)
T ss_pred CccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHH
Confidence 9999975432221 123467888999998753 24679999999999999996 99999776665554433
Q ss_pred HhC-CCCCCCCCC-CCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LRN-KPDFRRKPW-PSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~~-~~~~~~~~~-~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... ...++.+.. ...++.+.+++..|+ .+|.+|||+.+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 223 VREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred hhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 322 222222211 246788999999999 58999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=312.91 Aligned_cols=259 Identities=21% Similarity=0.347 Sum_probs=207.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++.+.||.|+||.||+|+.+. +.+.||+|.+..... ......+.+|+++++++ +||||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc--hHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCC
Confidence 468999999999999999999654 346799998765432 22467789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..|+||||+++|+|.+++........ ......+++..+..++.||+.||.|||+.+|+||||||+||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~--------~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~-- 151 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDE--------KLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS-- 151 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccc--------cccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe--
Confidence 99999999999999988754310000 00112689999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCC--CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.++|+|||++....... ......++..|+|||.+.+ ..+.++|||||||++|+|++ |..||.+.........
T Consensus 152 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~ 230 (275)
T cd05046 152 -SQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNR 230 (275)
T ss_pred -CCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHH
Confidence 47789999999987543221 2234467788999998754 45888999999999999998 8899987777666666
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+..+...+. ....++..+.+++.+||..+|.+|||+.+++..
T Consensus 231 ~~~~~~~~~--~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 231 LQAGKLELP--VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred HHcCCcCCC--CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 654443322 224578899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=309.15 Aligned_cols=244 Identities=24% Similarity=0.360 Sum_probs=201.8
Q ss_pred eeecccCCeEEEEEEEcC-CCC--EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEec
Q 008127 102 KLLGHGQFGYTYVATDKA-NGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~-~~~--~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~ 178 (577)
+.||.|+||.||+|.+.. .++ .||||.+...... ...+.+.+|+.+++++ +||||+++++++.. ..+++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEEEEEEe
Confidence 368999999999998865 333 6999998766532 4567899999999999 59999999999988 889999999
Q ss_pred cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeE
Q 008127 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 258 (577)
Q Consensus 179 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl 258 (577)
+++|+|.+.+... ....+++..++.++.|++.||.|||++|++||||||+||+++. ++.+||
T Consensus 77 ~~~~~L~~~l~~~---------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~---~~~~kl 138 (257)
T cd05040 77 APLGSLLDRLRKD---------------ALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLAS---DDKVKI 138 (257)
T ss_pred cCCCcHHHHHHhc---------------ccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEec---CCEEEe
Confidence 9999999877543 1146889999999999999999999999999999999999984 689999
Q ss_pred EecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 259 TDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 259 ~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+|||++........ .....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...+..+....+.....
T Consensus 139 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~ 218 (257)
T cd05040 139 GDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGE 218 (257)
T ss_pred ccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC
Confidence 99999987643221 113457788999998865 56889999999999999998 9999988877777776665322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... ....++..+.+++.+||..+|++|||+.++++
T Consensus 219 ~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 219 RLE--RPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred cCC--CCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 222 12357889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-38 Score=308.42 Aligned_cols=246 Identities=22% Similarity=0.397 Sum_probs=203.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+|++.+.||.|+||.||+|.+. .+..+|+|.+..... ....+.+|+++++++ +||||+++++++......++||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred HeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEEEE
Confidence 6899999999999999999875 467899998865432 345688999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++++|.+++... ...+++..++.++.|++.||.|||+.+++||||||+||+++ .++.+
T Consensus 79 e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~ 139 (256)
T cd05112 79 EFMEHGCLSDYLRAQ----------------RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVV 139 (256)
T ss_pred EcCCCCcHHHHHHhC----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeE
Confidence 999999998876432 24578999999999999999999999999999999999998 47789
Q ss_pred eEEecCCCcccCCCCC--ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 257 KATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 257 kl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
||+|||++........ .....++..|+|||.+. +.++.++|||||||++|+|++ |..||......+....+..+..
T Consensus 140 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~ 219 (256)
T cd05112 140 KVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFR 219 (256)
T ss_pred EECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCC
Confidence 9999999876533211 12234567899999876 456889999999999999998 9999988777777766654422
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+. ....+..+.+|+.+||..+|++|||+.++++.
T Consensus 220 ~~~---~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 220 LYK---PRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred CCC---CCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 221 12367899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=314.43 Aligned_cols=241 Identities=17% Similarity=0.252 Sum_probs=190.6
Q ss_pred eeecccCCeEEEEEEEcCCCC-------EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 102 KLLGHGQFGYTYVATDKANGD-------RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~-------~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
+.||.|+||.||+|.+..++. .||+|.+.... ....+.+..|+.+++.+ +||||+++++++..+...++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcEE
Confidence 369999999999998865544 48888875432 23456788899999998 59999999999999889999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC--
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE-- 252 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~-- 252 (577)
||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++..+.
T Consensus 77 v~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~ 140 (258)
T cd05078 77 VQEYVKFGSLDTYLKKN----------------KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRK 140 (258)
T ss_pred EEecCCCCcHHHHHhcC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccc
Confidence 99999999998876432 245788999999999999999999999999999999999985221
Q ss_pred ---CCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCC-CCCCCCChhHHHHH
Q 008127 253 ---DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ---~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~-~Pf~~~~~~~~~~~ 326 (577)
.+.++++|||++...... ....+++.|+|||++.+ .++.++|||||||++|+|++|. .||....... ...
T Consensus 141 ~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-~~~ 216 (258)
T cd05078 141 TGNPPFIKLSDPGISITVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-KLQ 216 (258)
T ss_pred cCCCceEEecccccccccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-HHH
Confidence 124799999998765432 23568899999998875 3588999999999999999985 5554444333 233
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+......++ ...+.++.+||.+||+.||++|||+.++++.
T Consensus 217 ~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 217 FYEDRHQLP----APKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred HHHccccCC----CCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 333333322 2355789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=315.35 Aligned_cols=250 Identities=26% Similarity=0.346 Sum_probs=197.4
Q ss_pred ceeeeeeecccCCeEEEEEEE----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--C
Q 008127 97 RYTIGKLLGHGQFGYTYVATD----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--N 170 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~----~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~ 170 (577)
.|++++.||+|+||.||+|.. ..++..||+|.+.... .......+.+|+.+++.+ +||||+++++++... .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCC
Confidence 478999999999999999974 4578899999986442 233456789999999999 599999999998875 5
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++||||++|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~----------------~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~-- 143 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRN----------------KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE-- 143 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc--
Confidence 789999999999998876432 23578999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh-----
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE----- 320 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~----- 320 (577)
.++.+||+|||++........ .....|+..|+|||++.+ .++.++|||||||++|+|+++..|+.....
T Consensus 144 -~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~ 222 (284)
T cd05079 144 -SEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKM 222 (284)
T ss_pred -CCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhh
Confidence 478899999999987643322 123457778999998764 468899999999999999998776532110
Q ss_pred ---------hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 321 ---------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 321 ---------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.......+.... ....+..++..+.+|+.+||+.+|.+|||+.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 223 IGPTHGQMTVTRLVRVLEEGK--RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred cccccccccHHHHHHHHHcCc--cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 011111122111 112245688999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=309.00 Aligned_cols=242 Identities=25% Similarity=0.399 Sum_probs=200.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||++. .+++.||+|.+.... ....+.+|+.+++.+ +||||+++++++..++ .++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~-~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-----TAQAFLEETAVMTKL-HHKNLVRLLGVILHNG-LYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-----hHHHHHHHHHHHHhC-CCCCcCeEEEEEcCCC-cEEE
Confidence 369999999999999999995 578899999886432 346788999999999 5999999999987654 7999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+.+... ....+++..++.++.|++.||.|||+.|++||||||+||+++ .++.
T Consensus 77 ~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---~~~~ 138 (254)
T cd05083 77 MELMSKGNLVNFLRTR---------------GRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---EDGV 138 (254)
T ss_pred EECCCCCCHHHHHHhc---------------CcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCc
Confidence 9999999999877432 234578999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||++...... ......+..|+|||.+.+ .++.++|||||||++|+|++ |+.||...+..+....+..+.
T Consensus 139 ~kl~Dfg~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-- 214 (254)
T cd05083 139 AKVSDFGLARVGSMG--VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY-- 214 (254)
T ss_pred EEECCCccceecccc--CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC--
Confidence 999999998764322 223345678999998764 56889999999999999997 999998887777666655432
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.......++..+.+++.+||..+|.+||++.+++.
T Consensus 215 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 215 -RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred -CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 22223567899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=306.17 Aligned_cols=242 Identities=24% Similarity=0.318 Sum_probs=198.1
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
++||+|+||.||+|.. .++..||+|.+.... .......+.+|+.+++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL--PQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECCCC
Confidence 3699999999999985 468899999886542 233445788999999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
++|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+||
T Consensus 77 ~~L~~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~ 137 (250)
T cd05085 77 GDFLSFLRKK----------------KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG---ENNVLKISDF 137 (250)
T ss_pred CcHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc---CCCeEEECCC
Confidence 9998876432 24578999999999999999999999999999999999998 4778999999
Q ss_pred CCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008127 262 GLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRK 337 (577)
Q Consensus 262 Gla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~ 337 (577)
|++......... ....++..|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+..... ..
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~ 214 (250)
T cd05085 138 GMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR---MS 214 (250)
T ss_pred ccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC---CC
Confidence 998754332211 12234567999998764 46889999999999999998 9999988777666665544321 12
Q ss_pred CCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 338 PWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 338 ~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
....++..+.+++.+||..+|++||++.++++
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 215 CPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 23457899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=307.93 Aligned_cols=247 Identities=23% Similarity=0.341 Sum_probs=202.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++.+.||+|+||.||+|.+. .+..+|+|.+.... ...+.+.+|+.+++.+ +||||+++++.+.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~~~~~ 77 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-EPIYI 77 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh----hHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-CCeEE
Confidence 457999999999999999999854 45679999876542 2456788999999999 59999999999887 77899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++|+|.+++... ....++...+..++.||+.||.|||+.|++||||||+||+++ .++
T Consensus 78 v~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~---~~~ 139 (260)
T cd05073 78 ITEFMAKGSLLDFLKSD---------------EGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASL 139 (260)
T ss_pred EEEeCCCCcHHHHHHhC---------------CccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCC
Confidence 99999999999877432 234578888999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCC--ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.+||+|||++........ .....++..|+|||++... ++.++|+|||||++|+|++ |..||.+.+.......+...
T Consensus 140 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~ 219 (260)
T cd05073 140 VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 219 (260)
T ss_pred cEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC
Confidence 999999999876543221 1223456779999988654 5789999999999999998 99999887776666655443
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. .......+.++.+++.+||+.+|++||++.++++
T Consensus 220 ~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 220 YR---MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred CC---CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 21 1223567889999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-38 Score=310.01 Aligned_cols=256 Identities=28% Similarity=0.491 Sum_probs=208.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcC-CCCEEEEEEeccccc-------CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKM-------ILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~-------~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
.|++.+.||+|+||.||+|.+.. +++.+|+|.+..... ........+.+|+.++.+..+||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 37888999999999999999887 678999998753221 1223456677899988764479999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEe
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLF 247 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl 247 (577)
++..++||||+++++|.+.+... ......+++..++.++.|++.||.|||+ .+++|+||+|+||++
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~-------------~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~ 147 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSL-------------KEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML 147 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHH-------------HhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE
Confidence 99999999999999998876431 1234568999999999999999999996 789999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ .++.+||+|||++.............|+..|+|||++.+. ++.++||||||+++|+|++|+.||...........
T Consensus 148 ~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~ 224 (269)
T cd08528 148 G---EDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATK 224 (269)
T ss_pred C---CCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHH
Confidence 8 4788999999999876554444566799999999988654 58899999999999999999999987776666655
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+...... ......+++.+.++|.+||..||.+||++.++..+
T Consensus 225 ~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 225 IVEAVYE--PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred HhhccCC--cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 5543322 11123578899999999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-38 Score=310.06 Aligned_cols=248 Identities=25% Similarity=0.357 Sum_probs=202.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+|.+.+.||.|+||.||+|.+... ...||||.+.... .....+.+.+|+.+++.+ +||||+++++++.+ +..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-CCc
Confidence 4689999999999999999987544 3468999876442 134566789999999999 59999999998875 457
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++|+|.+++... ...+++..+..++.|++.||.|||+.|++||||||+||+++.
T Consensus 82 ~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~--- 142 (270)
T cd05056 82 WIVMELAPLGELRSYLQVN----------------KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS--- 142 (270)
T ss_pred EEEEEcCCCCcHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec---
Confidence 8999999999999877432 245899999999999999999999999999999999999984
Q ss_pred CCCeeEEecCCCcccCCCCCcc--ccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
++.+||+|||++.......... ...+++.|+|||.+.. .++.++|||||||++|+|++ |..||.+....+....+.
T Consensus 143 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~ 222 (270)
T cd05056 143 PDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE 222 (270)
T ss_pred CCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 6789999999997664332221 2234567999998764 45889999999999999986 999998887777666665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+... ..++.++..+.++|.+||..+|.+|||+.+++.
T Consensus 223 ~~~~~---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 223 NGERL---PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred cCCcC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 44321 223567899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=305.86 Aligned_cols=242 Identities=25% Similarity=0.331 Sum_probs=198.7
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCC
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
++||.|+||.||+|.+.. ++.||+|.+..... ......+.+|+++++++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 369999999999999877 99999998866543 23556789999999999 599999999999999999999999999
Q ss_pred CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEec
Q 008127 182 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 261 (577)
Q Consensus 182 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DF 261 (577)
++|.+++... ...++...+..++.+++.||.|||+++++||||||+|||++ .++.+||+||
T Consensus 77 ~~l~~~l~~~----------------~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~---~~~~~~l~d~ 137 (251)
T cd05041 77 GSLLTFLRKK----------------KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG---ENNVLKISDF 137 (251)
T ss_pred CcHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc---CCCcEEEeec
Confidence 9998876432 24678899999999999999999999999999999999998 4778999999
Q ss_pred CCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCC
Q 008127 262 GLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR 336 (577)
Q Consensus 262 Gla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~ 336 (577)
|++......... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...........+.... ..
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-~~-- 214 (251)
T cd05041 138 GMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-RM-- 214 (251)
T ss_pred cccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC-CC--
Confidence 999765422111 11234567999998764 46889999999999999999 899997777665555554322 11
Q ss_pred CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 337 ~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.....++.++.+++.+||..+|.+|||+.++++
T Consensus 215 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 215 PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred CCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 122457889999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-38 Score=312.03 Aligned_cols=249 Identities=25% Similarity=0.395 Sum_probs=195.7
Q ss_pred cceeeeeeecccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--C
Q 008127 96 RRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--D 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~ 169 (577)
.+|++.+.||+|+||.||+|. +..++..||+|.+.... ......+.+|+++++.+ +||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCCC
Confidence 478999999999999999997 34678899999986543 34456789999999999 59999999998753 4
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
..+++||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~----------------~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~- 142 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKH----------------RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE- 142 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhc----------------CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC-
Confidence 5789999999999999877432 24588999999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCCc----cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh---
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--- 321 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~--- 321 (577)
.++.+||+|||++......... ....++..|+|||++.+ .++.++|||||||++|||++|..|+......
T Consensus 143 --~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~ 220 (284)
T cd05081 143 --SENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMR 220 (284)
T ss_pred --CCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhh
Confidence 4788999999999876433221 11234456999998765 4688999999999999999988776432211
Q ss_pred ------------HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 322 ------------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 322 ------------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+..++.....+ .....++..+.+|+.+||..+|++|||+.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 221 MMGNDKQGQMIVYHLIELLKNNGRL--PAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred hcccccccccchHHHHHHHhcCCcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0011222222211 223467889999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=334.34 Aligned_cols=249 Identities=28% Similarity=0.451 Sum_probs=198.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC------
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN------ 170 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~------ 170 (577)
.+...+.||+|+||.||+++++.+|+.||||.+..... ....+.+.+|+++|++|. |||||+++++-++..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~--~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS--LRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcc--cchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCcccc
Confidence 35667789999999999999999999999999876442 335678899999999995 999999998765433
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
...+|||||.||+|...+.+- .+...|++.+++.++..+..||.|||++|||||||||.||++-..
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~P--------------EN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~G 156 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSP--------------ENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIG 156 (732)
T ss_pred cceEEEeecCCCcHHHHhcCc--------------ccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeec
Confidence 467999999999999877432 234679999999999999999999999999999999999998743
Q ss_pred C-CCCCeeEEecCCCcccCCCCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCCCCCCC----hhHH
Q 008127 251 K-EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKT----EDGI 323 (577)
Q Consensus 251 ~-~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~Pf~~~~----~~~~ 323 (577)
. ....-||+|||.|+.+.++..+...+||+.|.+||++. +.|+..+|.|||||++|+++||..||.... ..++
T Consensus 157 edgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~ 236 (732)
T KOG4250|consen 157 EDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEI 236 (732)
T ss_pred CCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchh
Confidence 2 34568999999999999999999999999999999987 456888999999999999999999995432 2234
Q ss_pred HHHHHhCCCCCC-----------------CCCCCCCCH----HHHHHHHHccccCcCCCC
Q 008127 324 FKEVLRNKPDFR-----------------RKPWPSISN----SAKDFVKKLLVKDPRARL 362 (577)
Q Consensus 324 ~~~i~~~~~~~~-----------------~~~~~~~s~----~~~~li~~~l~~dP~~Rp 362 (577)
...++..++.-. .+....+++ .+..++..+|..+|++|-
T Consensus 237 ~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 237 MWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred hhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 444433222110 000112333 245677888999999998
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=310.72 Aligned_cols=256 Identities=20% Similarity=0.253 Sum_probs=205.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcC----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-CC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~ 170 (577)
++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+ +||||+++++++.. +.
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDGE 82 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCC
Confidence 579999999999999999999876 35789999876432 334567789999999999 59999999998765 56
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
..++++||+++|+|.+++....... ......+++..++.++.||+.||.|||+++++||||||+||+++
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~-- 151 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGE---------ANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID-- 151 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccc---------cccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc--
Confidence 7899999999999988775431000 00125689999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCCc---cccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||+++.+...... ....++..|+|||++.+. ++.++|||||||++|++++ |+.||...+..++..
T Consensus 152 -~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 230 (280)
T cd05043 152 -EELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAA 230 (280)
T ss_pred -CCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHH
Confidence 4689999999999865433211 223466789999987654 5889999999999999999 999998877666555
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..+ .... ....+++++.+++.+||..||++|||+.++++
T Consensus 231 ~~~~~-~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 231 YLKDG-YRLA--QPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHHcC-CCCC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 44443 2222 23457889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-38 Score=308.84 Aligned_cols=241 Identities=18% Similarity=0.202 Sum_probs=188.2
Q ss_pred eeecccCCeEEEEEEEcC------------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 102 KLLGHGQFGYTYVATDKA------------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~------------~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
+.||+|+||.||+|.... ....||+|.+.... ......+..|+.++..+ +||||+++++++..+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQV-SHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence 358999999999997432 23368899876542 23445678899999999 599999999999998
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
...++||||+++|+|..++.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~----------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~ 140 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHR----------------KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAR 140 (262)
T ss_pred CCCEEEEecccCCCHHHHHHh----------------cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEec
Confidence 899999999999998765532 2356899999999999999999999999999999999999974
Q ss_pred CC----CCCCeeEEecCCCcccCCCCCccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHH-hCCCCCCCCChhH
Q 008127 250 AK----EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILL-CGRRPFWDKTEDG 322 (577)
Q Consensus 250 ~~----~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~-tg~~Pf~~~~~~~ 322 (577)
.+ ....+|++|||++...... ....++..|+|||++. ..++.++|||||||++|+|+ +|..||......+
T Consensus 141 ~~~~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~ 217 (262)
T cd05077 141 EGIDGECGPFIKLSDPGIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE 217 (262)
T ss_pred CCccCCCCceeEeCCCCCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH
Confidence 21 1124899999998765322 3346888999999875 34688999999999999998 5888887655443
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.. ......... ....+.++.+||.+||+.||.+||++.+|+++
T Consensus 218 ~~-~~~~~~~~~----~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 218 KE-RFYEGQCML----VTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HH-HHHhcCccC----CCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 32 222222111 12345789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=306.75 Aligned_cols=228 Identities=22% Similarity=0.327 Sum_probs=185.9
Q ss_pred cCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCchhH
Q 008127 107 GQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD 186 (577)
Q Consensus 107 G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~ 186 (577)
|.||.||+|+++.+|+.||+|.+.... ...+|...+... .||||+++++++.....+|+||||++||+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 899999999999999999999987643 123344444455 49999999999999999999999999999988
Q ss_pred HHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcc
Q 008127 187 RILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266 (577)
Q Consensus 187 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~ 266 (577)
.+... ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|||++..
T Consensus 75 ~l~~~-----------------~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df~~~~~ 134 (237)
T cd05576 75 HISKF-----------------LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYFSRWSE 134 (237)
T ss_pred HHHHh-----------------cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecccchhc
Confidence 77433 4589999999999999999999999999999999999998 477899999998866
Q ss_pred cCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHH
Q 008127 267 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 345 (577)
Q Consensus 267 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 345 (577)
.... .....++..|+|||.+.+ .++.++||||+||++|+|++|..||...... + ...... ...+.+++.
T Consensus 135 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-~~~~~~--~~~~~~~~~ 204 (237)
T cd05576 135 VEDS--CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----I-NTHTTL--NIPEWVSEE 204 (237)
T ss_pred cccc--cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-cccccc--CCcccCCHH
Confidence 5432 234466788999998864 4688999999999999999999987543221 0 001111 112347889
Q ss_pred HHHHHHHccccCcCCCCCH-----HHHhcCccc
Q 008127 346 AKDFVKKLLVKDPRARLTA-----AQALSHPWV 373 (577)
Q Consensus 346 ~~~li~~~l~~dP~~Rpt~-----~~il~hp~f 373 (577)
+.++|.+||+.||.+|||+ .++++||||
T Consensus 205 ~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred HHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 9999999999999999986 999999998
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=314.19 Aligned_cols=249 Identities=23% Similarity=0.295 Sum_probs=199.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.+|++.+.||+|+||.||+|.+..+|. .||+|.+..... +.....+.+|+.+++.+ +||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEFMDEALIMASM-DHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCC-C
Confidence 468899999999999999999887776 478888764432 33445688999999999 599999999988754 4
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++++||+++|+|.+++... ...+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~----------------~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~--- 143 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEH----------------KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK--- 143 (303)
T ss_pred ceeeehhcCCCCHHHHHHhc----------------ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---
Confidence 67999999999998876432 24678899999999999999999999999999999999997
Q ss_pred CCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+++....... .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+........
T Consensus 144 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~- 222 (303)
T cd05110 144 SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD- 222 (303)
T ss_pred CCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-
Confidence 467899999999986543222 223346778999998765 45889999999999999997 999997766554443
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
++.....++ ..+..+..+.+++.+||..+|++||++.++++.
T Consensus 223 ~~~~~~~~~--~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 223 LLEKGERLP--QPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred HHHCCCCCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 333332222 224567899999999999999999999998773
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-38 Score=310.42 Aligned_cols=240 Identities=17% Similarity=0.191 Sum_probs=189.2
Q ss_pred eecccCCeEEEEEEEcCC------------------------CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCC
Q 008127 103 LLGHGQFGYTYVATDKAN------------------------GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~------------------------~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn 158 (577)
.||+|+||.||+|....+ ...||+|.+.... ......+.+|+.+++.+ +|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l-~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQV-SHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcC-CCCC
Confidence 599999999999975322 2458899886442 22345678899999998 5999
Q ss_pred eeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceec
Q 008127 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 238 (577)
Q Consensus 159 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHr 238 (577)
|+++++++......++||||+++|+|...+.. ....+++..+..++.||+.||.|||+++|+||
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~----------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~ 141 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK----------------EKGRVPVAWKITVAQQLASALSYLEDKNLVHG 141 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHh----------------cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCC
Confidence 99999999999999999999999998776532 23568899999999999999999999999999
Q ss_pred cCCCCcEEeecCC----CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHH-hC
Q 008127 239 DMKPENFLFKSAK----EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILL-CG 311 (577)
Q Consensus 239 DlKp~NILl~~~~----~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~-tg 311 (577)
||||+|||++..+ ....+||+|||++...... ....++..|+|||.+.+ .++.++|||||||++|+|+ +|
T Consensus 142 dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g 218 (274)
T cd05076 142 NVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDG 218 (274)
T ss_pred CCCcccEEEeccCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999997421 2335899999988654321 23467889999998864 3588999999999999985 69
Q ss_pred CCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 312 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 312 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..||......+... +.......+ ...++.+.++|.+||..+|.+|||+.++|++
T Consensus 219 ~~p~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 219 EVPLKERTPSEKER-FYEKKHRLP----EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred CCCccccChHHHHH-HHHhccCCC----CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 99998766554433 323222222 2245789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-38 Score=309.24 Aligned_cols=251 Identities=25% Similarity=0.344 Sum_probs=199.4
Q ss_pred eecccCCeEEEEEEEcCCC------CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 103 LLGHGQFGYTYVATDKANG------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~------~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.||.|+||.||+|.+.... +.+|||.+.+... ......+.+|+.+++.+ +||||+++++++...+..++||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEEEE
Confidence 5999999999999876433 6899998765421 23456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC--CCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDS 254 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~--~~~ 254 (577)
||+++++|.+++...... ......+++..+..++.||+.||.|||+.+++|+||||+||+++..+ ...
T Consensus 79 e~~~~~~L~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~ 148 (269)
T cd05044 79 ELMEGGDLLSYLRDARVE----------RFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADR 148 (269)
T ss_pred eccCCCcHHHHHHHhhhc----------ccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCc
Confidence 999999999988654110 00234578899999999999999999999999999999999998522 123
Q ss_pred CeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 255 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
.+||+|||++........ .....++..|+|||++.+ ..+.++|||||||++|+|++ |..||...+..+....+..
T Consensus 149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 228 (269)
T cd05044 149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA 228 (269)
T ss_pred ceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc
Confidence 799999999976543221 123356788999998764 46889999999999999998 9999987776666555543
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+. . ......+|..+.+||.+||..+|.+||++.++++
T Consensus 229 ~~-~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 229 GG-R--LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred CC-c--cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 22 1 1223457889999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=321.19 Aligned_cols=263 Identities=26% Similarity=0.442 Sum_probs=219.5
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc-----CCCCeeEEEEE
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-----GHENVVKFYNA 165 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpniv~~~~~ 165 (577)
.+.+..+|.|....|+|-|+.|..|.+...|..||||+|..+.. ....=+.|++||++|. +--|++.|+..
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~ 502 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKFHCLRLFRH 502 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhhHHHHHHHH
Confidence 34567899999999999999999999999999999999987643 4455578999999996 34589999999
Q ss_pred EEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcE
Q 008127 166 FEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 245 (577)
Q Consensus 166 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NI 245 (577)
|...+++|||+|.+ ..+|.+.|..- -.+-.|....++.|+.|++.||..|-..||+|.||||+||
T Consensus 503 F~hknHLClVFE~L-slNLRevLKKy--------------G~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNi 567 (752)
T KOG0670|consen 503 FKHKNHLCLVFEPL-SLNLREVLKKY--------------GRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNI 567 (752)
T ss_pred hhhcceeEEEehhh-hchHHHHHHHh--------------CcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccce
Confidence 99999999999998 45888877543 2446688889999999999999999999999999999999
Q ss_pred EeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 246 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 246 Ll~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
|++. ....+||||||.|.....+. .+.+.-+..|+|||++.| .|....|+||.||+||||+||+..|.+.+...++
T Consensus 568 LVNE--~k~iLKLCDfGSA~~~~ene-itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML 644 (752)
T KOG0670|consen 568 LVNE--SKNILKLCDFGSASFASENE-ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML 644 (752)
T ss_pred Eecc--CcceeeeccCcccccccccc-ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHH
Confidence 9984 56789999999998876544 456677889999998876 4689999999999999999999999999988888
Q ss_pred HHHHhCCCCCCCCCC-------------------------------------------------CCCC-------HHHHH
Q 008127 325 KEVLRNKPDFRRKPW-------------------------------------------------PSIS-------NSAKD 348 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~-------------------------------------------------~~~s-------~~~~~ 348 (577)
...+.-...|+...+ +.++ ..+.+
T Consensus 645 rl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rd 724 (752)
T KOG0670|consen 645 RLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRD 724 (752)
T ss_pred HHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHH
Confidence 766554333332110 0011 25789
Q ss_pred HHHHccccCcCCCCCHHHHhcCccccc
Q 008127 349 FVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 349 li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
||.+||..||++|+|..++|.||||+.
T Consensus 725 LLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 725 LLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHHHhccChhhcCCHHHHhcCCcccC
Confidence 999999999999999999999999974
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=305.83 Aligned_cols=243 Identities=23% Similarity=0.287 Sum_probs=191.8
Q ss_pred eeecccCCeEEEEEEEcC---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE-cCCeEEEEEe
Q 008127 102 KLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE-DDNYVYIAME 177 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-~~~~~~lv~e 177 (577)
+.||+|+||.||+|.+.. .+..||||.+.... .....+.+.+|+.+++.+ +||||+++++++. .++..++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEEe
Confidence 368999999999998653 34579999875432 233467788999999999 5999999999765 4667899999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++|+|.+++... ...++...+..++.||+.||.|||+.+|+||||||+|||++ .++.+|
T Consensus 78 ~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---~~~~~k 138 (262)
T cd05058 78 YMKHGDLRNFIRSE----------------THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---ESFTVK 138 (262)
T ss_pred cCCCCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEE
Confidence 99999998877432 23457777889999999999999999999999999999998 477899
Q ss_pred EEecCCCcccCCCC-----CccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 258 ATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 258 l~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
|+|||++....... ......+++.|+|||.+. ..++.++|||||||++|+|++ |.+||......+....+..+
T Consensus 139 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~ 218 (262)
T cd05058 139 VADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG 218 (262)
T ss_pred ECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence 99999997653221 112335677899999875 456889999999999999999 56677766666666555543
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... . ....+++.+.+++.+||..+|++||++.+++.
T Consensus 219 ~~~-~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 219 RRL-L--QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred CCC-C--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 221 1 11346789999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=304.35 Aligned_cols=247 Identities=17% Similarity=0.276 Sum_probs=192.2
Q ss_pred eecccCCeEEEEEEEcCC--CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 103 LLGHGQFGYTYVATDKAN--GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~--~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
.||+|+||.||+|..... ...+++|.+..... ......+.+|+.+++.+ +||||+++++.+.....+|+||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS--SKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC--hHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEecCC
Confidence 599999999999975433 23566776654321 23457789999999999 59999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEe
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~D 260 (577)
+|+|.+++.... .....+++..+..++.||+.||.|||+.+|+||||||+|||++ .++.+||+|
T Consensus 79 ~~~L~~~l~~~~-------------~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~---~~~~~~l~D 142 (268)
T cd05086 79 LGDLKSYLSQEQ-------------WHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT---SDLTVKVGD 142 (268)
T ss_pred CCcHHHHHHhhh-------------cccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc---CCccEEecc
Confidence 999998875431 0123466777889999999999999999999999999999998 478899999
Q ss_pred cCCCcccCCCC---CccccccCCccccchhccc--------CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 261 FGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 261 FGla~~~~~~~---~~~~~~gt~~y~aPE~~~~--------~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
||++....... .....+|+..|+|||++.. .++.++|||||||++|+|++ |..||......+.+..++
T Consensus 143 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 222 (268)
T cd05086 143 YGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVI 222 (268)
T ss_pred cccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 99986432211 1234578899999998742 23678999999999999997 577887777777777765
Q ss_pred hCCC-CCCCCC-CCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 329 RNKP-DFRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 329 ~~~~-~~~~~~-~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.... ....+. ...+++.+.+++..|| .+|.+||++.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 223 KDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred hhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 5432 222221 2346788999999999 67999999999865
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=330.51 Aligned_cols=248 Identities=26% Similarity=0.418 Sum_probs=216.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
...|.++||.|.||+|++|+.+..|+ .||||.++..- .+.....|+.|..||.++ +||||++|.++......+.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKPVM 706 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccC-CCCcEEEEEEEEecCceeE
Confidence 35778899999999999999887774 69999997543 356778899999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||+|||++|+|..+|..+ .+.|+.-++..+++.|+.|+.||-+.++|||||-..|||+++ +
T Consensus 707 IiTEyMENGsLDsFLR~~----------------DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs---n 767 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQN----------------DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS---N 767 (996)
T ss_pred EEhhhhhCCcHHHHHhhc----------------CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc---c
Confidence 999999999999887644 577999999999999999999999999999999999999984 8
Q ss_pred CCeeEEecCCCcccCCCCC--cccccc--CCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKK--FQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~--~~~~~g--t~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i 327 (577)
..+|++|||+++.+.+... +.+.-| ..+|.|||.+. .+++.++||||+||++||.++ |..|||+++.+++++.|
T Consensus 768 LvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI 847 (996)
T KOG0196|consen 768 LVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 847 (996)
T ss_pred eEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHH
Confidence 9999999999998865442 222223 35799999875 678999999999999999766 99999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+ ++.++..++|..+..|+..||++|-..||...+|+.
T Consensus 848 e~g---yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 848 EQG---YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred Hhc---cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 775 344455789999999999999999999999999876
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=304.72 Aligned_cols=238 Identities=16% Similarity=0.188 Sum_probs=189.0
Q ss_pred eeecccCCeEEEEEEEcCCC----------CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 102 KLLGHGQFGYTYVATDKANG----------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~----------~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+.||+|+||.||+|.+..++ ..+++|.+..... ....+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQL-SHKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcC-CCcchhheeeEEec-CC
Confidence 36999999999999988776 3578887654421 257788999999999 59999999999887 77
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++||||+++|+|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++..+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~ 138 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHRE----------------KNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYG 138 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhh----------------ccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCc
Confidence 89999999999998877543 12688999999999999999999999999999999999998422
Q ss_pred ----CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 252 ----EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 252 ----~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
....+||+|||++..... .....++..|+|||++.+. ++.++|||||||++|+|++ |..||...+..+.
T Consensus 139 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~ 215 (259)
T cd05037 139 LNEGYVPFIKLSDPGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK 215 (259)
T ss_pred cccCCceeEEeCCCCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH
Confidence 112799999999986543 2234677889999998754 5889999999999999999 6888866654443
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...... ....+. ..+..+.++|.+||..+|.+|||+.++++
T Consensus 216 ~~~~~~-~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 216 ERFYQD-QHRLPM----PDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHHHhc-CCCCCC----CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 333321 111111 12378999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=306.35 Aligned_cols=272 Identities=30% Similarity=0.479 Sum_probs=209.7
Q ss_pred CCCccccccc-cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCC-------C
Q 008127 86 TDFGYDKDFD-RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-------E 157 (577)
Q Consensus 86 ~~~~~~~~~~-~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-------p 157 (577)
......+.|. .+|.+.++||-|.|++||+|.|..+.+.||+|+.+... ...+....||.+|++++.+ .
T Consensus 67 HpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~ 142 (590)
T KOG1290|consen 67 HPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKK 142 (590)
T ss_pred ceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 3344556677 89999999999999999999999999999999987653 3566778999999998733 3
Q ss_pred CeeEEEEEEEc----CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-
Q 008127 158 NVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL- 232 (577)
Q Consensus 158 niv~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~- 232 (577)
+||+|++.|.. +.++|+|+|++ |.+|+..|... ..+.++...++.|++|||.||.|||.
T Consensus 143 ~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s---------------~YrGlpl~~VK~I~~qvL~GLdYLH~e 206 (590)
T KOG1290|consen 143 CVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYS---------------NYRGLPLSCVKEICRQVLTGLDYLHRE 206 (590)
T ss_pred eeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHh---------------CCCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 79999999974 45899999999 88898877654 45779999999999999999999997
Q ss_pred cCceeccCCCCcEEeecCC-------------------------------------------------------------
Q 008127 233 HGLVHRDMKPENFLFKSAK------------------------------------------------------------- 251 (577)
Q Consensus 233 ~~iiHrDlKp~NILl~~~~------------------------------------------------------------- 251 (577)
.||||.||||+|||+...+
T Consensus 207 cgIIHTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~ 286 (590)
T KOG1290|consen 207 CGIIHTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEA 286 (590)
T ss_pred cCccccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhh
Confidence 6999999999999992210
Q ss_pred --------------------------------------------------C-----------------------------
Q 008127 252 --------------------------------------------------E----------------------------- 252 (577)
Q Consensus 252 --------------------------------------------------~----------------------------- 252 (577)
.
T Consensus 287 ~l~~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~ 366 (590)
T KOG1290|consen 287 SLAGLEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLS 366 (590)
T ss_pred hhcccccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhccccccccccccc
Confidence 0
Q ss_pred -----------------------CCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHH
Q 008127 253 -----------------------DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 308 (577)
Q Consensus 253 -----------------------~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el 308 (577)
+..|||+|||-|++.. ..++.-+.|..|+|||++.+ .|++.+||||++|++|||
T Consensus 367 s~~s~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~--khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FEL 444 (590)
T KOG1290|consen 367 SPSSPGTIASNPLVNPDIPLPECDIRVKIADLGNACWVH--KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFEL 444 (590)
T ss_pred CcCCccccccccccCCCCCCCccceeEEEeeccchhhhh--hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHh
Confidence 0136777777777653 44555678999999998765 689999999999999999
Q ss_pred HhCCCCCCCCC------hhHHHHHHH------------hCCC--CC-----------CCCCCCC---------CC----H
Q 008127 309 LCGRRPFWDKT------EDGIFKEVL------------RNKP--DF-----------RRKPWPS---------IS----N 344 (577)
Q Consensus 309 ~tg~~Pf~~~~------~~~~~~~i~------------~~~~--~~-----------~~~~~~~---------~s----~ 344 (577)
+||...|...+ .++-+..|+ .+.. .| ...+|+- +| .
T Consensus 445 aTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~ 524 (590)
T KOG1290|consen 445 ATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQ 524 (590)
T ss_pred hcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHH
Confidence 99999994321 111122211 1110 00 0112321 22 3
Q ss_pred HHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 345 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 345 ~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
++.+||.-||+.+|++||||.++|+|||+......
T Consensus 525 ~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 525 QFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred HHHHHHHHHHhcCccccccHHHHhcCccccCCCCC
Confidence 67899999999999999999999999999976654
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=309.00 Aligned_cols=250 Identities=17% Similarity=0.213 Sum_probs=182.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhH--------HHHHHHHHHHHHhcCCCCeeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAV--------EDVKREVKILQALAGHENVVK 161 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~--------~~~~~E~~~l~~l~~hpniv~ 161 (577)
...++|++.+.||+|+||.||+|.+..+ +..+|+|+............ .....+...+..+ +|++|+.
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~ 87 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIPK 87 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCCc
Confidence 3456899999999999999999998877 66778886433221100000 0112223334445 5999999
Q ss_pred EEEEEEcCC----eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCcee
Q 008127 162 FYNAFEDDN----YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 237 (577)
Q Consensus 162 ~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiH 237 (577)
+++++.... ..++++|++. .++.+.+.. ....++..++.++.|++.||.|||+.+|+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH 149 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKR-----------------IKCKNKKLIKNIMKDMLTTLEYIHEHGISH 149 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhc-cCHHHHHHh-----------------hccCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 998765432 4578888874 345443321 134578889999999999999999999999
Q ss_pred ccCCCCcEEeecCCCCCCeeEEecCCCcccCCCC--------CccccccCCccccchhcccC-CCCCCchhhHHHHHHHH
Q 008127 238 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYIL 308 (577)
Q Consensus 238 rDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el 308 (577)
|||||+|||++ .++.++|+|||+|+...... ......||+.|+|||++.+. ++.++|||||||++|+|
T Consensus 150 rDiKp~Nill~---~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el 226 (294)
T PHA02882 150 GDIKPENIMVD---GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKW 226 (294)
T ss_pred CCCCHHHEEEc---CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 99999999998 46789999999997653221 11234799999999988754 58899999999999999
Q ss_pred HhCCCCCCCCCh-hHHH--------HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 309 LCGRRPFWDKTE-DGIF--------KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 309 ~tg~~Pf~~~~~-~~~~--------~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
++|..||.+... .... ..+..+. ...+..++.+.+++..||..+|++||++.++++
T Consensus 227 ~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 227 AGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGK-----IKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HhCCCCCCccccchHHHHHhHHHHHHHhhhhh-----hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 999999977632 2211 2222221 123456789999999999999999999999875
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=304.94 Aligned_cols=253 Identities=20% Similarity=0.331 Sum_probs=201.0
Q ss_pred eeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC----
Q 008127 98 YTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN---- 170 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 170 (577)
|.+.+.||+|+||.||+|.+. .+++.||||++..... .....+.+.+|+.+++.+ +||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF-SSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC-ChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCc
Confidence 567889999999999999864 3578999999865432 334567789999999999 5999999999886432
Q ss_pred --eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 171 --YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
..+++++|+++|+|.+++...... .....++...++.++.||+.||.|||+.||+||||||+||+++
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~-----------~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~ 147 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIG-----------EEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN 147 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc
Confidence 347899999999998876432110 1123578899999999999999999999999999999999997
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
.++.+||+|||+++....... .....+++.|++||.+... ++.++|||||||++|+|++ |.+||.+....+.
T Consensus 148 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~ 224 (273)
T cd05074 148 ---ENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEI 224 (273)
T ss_pred ---CCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHH
Confidence 478899999999986543221 1233456789999987654 4788999999999999999 8999987777766
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..+...... . ..+..+..+.+++.+||..+|.+|||+.+++.
T Consensus 225 ~~~~~~~~~~-~--~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 225 YNYLIKGNRL-K--QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred HHHHHcCCcC-C--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 6666554321 1 12457789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=316.77 Aligned_cols=244 Identities=25% Similarity=0.405 Sum_probs=205.2
Q ss_pred eeeeeecccCCeEEEEEEEcC--CC--CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 99 TIGKLLGHGQFGYTYVATDKA--NG--DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 99 ~~~~~lG~G~fg~V~~~~~~~--~~--~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+.++||.|.||.||+|.... .| -.||||+.+.+. .+...+.|..|..+|+.+ +|||||+++|+|.+. ..||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnf-dHphIikLIGv~~e~-P~Wi 467 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNF-DHPHIIKLIGVCVEQ-PMWI 467 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhC-CCcchhheeeeeecc-ceeE
Confidence 345689999999999997642 23 358888765543 345688999999999999 699999999999865 4899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||+++-|.|..+|..+ ...++......++.||+.||.|||+..+|||||-..|||+.+ ..
T Consensus 468 vmEL~~~GELr~yLq~n----------------k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS---p~ 528 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQN----------------KDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS---PQ 528 (974)
T ss_pred EEecccchhHHHHHHhc----------------cccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC---cc
Confidence 99999999999988654 467888899999999999999999999999999999999985 67
Q ss_pred CeeEEecCCCcccCCCCCccccccCC--ccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~--~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.|||+|||+++.+.+...+....|.. -|||||.++ ..++.++|||-|||.+||++. |..||.+-...++.-.+-.+
T Consensus 529 CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG 608 (974)
T KOG4257|consen 529 CVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG 608 (974)
T ss_pred eeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCC
Confidence 89999999999998777666555544 499999886 567999999999999999887 99999998777766666555
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
.. .+..+.+|+.+..|+.+||.++|.+||+..++.
T Consensus 609 eR---lP~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 609 ER---LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred CC---CCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 42 233467999999999999999999999887754
|
|
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=306.63 Aligned_cols=250 Identities=26% Similarity=0.404 Sum_probs=199.6
Q ss_pred cceeeeeeecccCCeEEEEEEEc----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--C
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--D 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~ 169 (577)
+.|++.+.||+|+||.||+|... .++..||||.+...... .....+.+|+.+++.+ .||||+++++++.. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTL-DHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhC-CCCChheEEeeeecCCC
Confidence 36888899999999999999864 34789999998765431 3467899999999999 59999999999887 5
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
...++||||+++++|.+++... ...++...+..++.||+.||.|||+.|++||||||+||+++
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~----------------~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~- 143 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRH----------------RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE- 143 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhC----------------ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc-
Confidence 6899999999999998877432 23588999999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCCc----cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh---
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--- 321 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~--- 321 (577)
.++.++|+|||++......... ....++..|+|||.+.+ .++.++|||||||++|+|++|..||......
T Consensus 144 --~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~ 221 (284)
T cd05038 144 --SEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR 221 (284)
T ss_pred --CCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc
Confidence 4689999999999876532221 12345567999998764 4588999999999999999999998653221
Q ss_pred -----------HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 322 -----------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 322 -----------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
......+......+ ....++.++.+|+.+||..+|.+|||+.++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 222 MIGIAQGQMIVTRLLELLKEGERLP--RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred ccccccccccHHHHHHHHHcCCcCC--CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 11222333222222 22456789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=320.45 Aligned_cols=257 Identities=25% Similarity=0.335 Sum_probs=216.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+...+.++||+|+||.|++|.|...+ ..||||++...... .....|.+|+.+|.+|. |||+++||++..+ ..+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~--~~mddflrEas~M~~L~-H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN--AIMDDFLREASHMLKLQ-HPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc--hhHHHHHHHHHHHHhcc-CcceeEEeeeecc-chh
Confidence 34667889999999999999886533 36899999766542 26789999999999995 9999999999987 568
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
.+|||+++.|+|++.|.+. ....|.......++.||+.|+.||.++++|||||-..|+||.+
T Consensus 186 mMV~ELaplGSLldrLrka---------------~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas--- 247 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKA---------------KKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS--- 247 (1039)
T ss_pred hHHhhhcccchHHHHHhhc---------------cccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc---
Confidence 8999999999999988652 3466778888999999999999999999999999999999985
Q ss_pred CCCeeEEecCCCcccCCCCCccccc----cCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIV----GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~----gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
...|||+||||.+.+..++.+.... -...|+|||.++ ++++.++|||++||++|||++ |..||.+.....++++
T Consensus 248 prtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~ 327 (1039)
T KOG0199|consen 248 PRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN 327 (1039)
T ss_pred cceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh
Confidence 6789999999999887666544322 344699999987 567999999999999999999 8999999999999988
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
|-.+ ..+++ .+.+|+.+.++++.||..+|++|||+..|.+.-+..+.+
T Consensus 328 iD~~-erLpR--Pk~csedIY~imk~cWah~paDRptFsair~~~~l~eaq 375 (1039)
T KOG0199|consen 328 IDAG-ERLPR--PKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQ 375 (1039)
T ss_pred cccc-ccCCC--CCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcC
Confidence 8743 33333 356899999999999999999999999998766666543
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=308.27 Aligned_cols=254 Identities=22% Similarity=0.303 Sum_probs=207.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
......+.++||+|.||.|.+|. ...+..||||.++.... .....+|.+|+.+|.+|+ |||||.++++|..++.++
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCe-veg~lkVAVK~Lr~~a~--~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCE-VEGPLKVAVKILRPDAT--KNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDPLC 611 (807)
T ss_pred chhheehhhhhcCcccceeEEEE-ecCceEEEEeecCcccc--hhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCchH
Confidence 34567888999999999999997 33468999999976643 335688999999999995 999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|+||+++|+|.+++.+... ..+.......|+.||+.|+.||.+.++|||||.+.|+|++ .+
T Consensus 612 mI~EYmEnGDLnqFl~ahea---------------pt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~---~e 673 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHEL---------------PTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD---GE 673 (807)
T ss_pred HHHHHHhcCcHHHHHHhccC---------------cccccchhHHHHHHHHHHHHHHHhhchhhccccccceeec---Cc
Confidence 99999999999998865511 1234455677999999999999999999999999999998 58
Q ss_pred CCeeEEecCCCcccCCCCCcc---ccccCCccccchh-cccCCCCCCchhhHHHHHHHHHh--CCCCCCCCChhHHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLC--GRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~-~~~~~~~~~DiwSlG~il~el~t--g~~Pf~~~~~~~~~~~i 327 (577)
+++||+|||+++.+-.+..+. ..+-..+|||||. +.+++++++|+|+||+++||+++ ...||...+.+++.++.
T Consensus 674 ~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~ 753 (807)
T KOG1094|consen 674 FTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENA 753 (807)
T ss_pred ccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhh
Confidence 999999999999765544332 3456789999995 57899999999999999999765 88999888887777665
Q ss_pred HhCCCC----CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LRNKPD----FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~~~~~----~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
-.-... .-....+-++..+.++|.+||..+.++|||.+++-.
T Consensus 754 ~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 754 GEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred hhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 332111 111223457889999999999999999999999743
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=314.60 Aligned_cols=275 Identities=21% Similarity=0.266 Sum_probs=191.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEc----------------CCCCEEEEEEecccccCch-----------hhHHHHHHHH
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK----------------ANGDRVAVKKIEKNKMILP-----------IAVEDVKREV 147 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~----------------~~~~~vaiK~i~~~~~~~~-----------~~~~~~~~E~ 147 (577)
.++|.+.++||+|+||.||+|.+. ..++.||||.+........ ...+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 458999999999999999999752 3456899999864321100 0112234567
Q ss_pred HHHHHhcCCCC-----eeEEEEEEEc--------CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHH-------hhhc
Q 008127 148 KILQALAGHEN-----VVKFYNAFED--------DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL-------AIRK 207 (577)
Q Consensus 148 ~~l~~l~~hpn-----iv~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~-------~~~~ 207 (577)
.++.++. |.+ +++++++|.. .+..|+||||+++|+|.+++.............++ ....
T Consensus 224 ~~l~~l~-~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 224 YMCAKIK-RNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHhh-cccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 7777775 443 3667776643 35689999999999999988643211100000000 0111
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCcccc--ccCCccccc
Q 008127 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--VGSAYYVAP 285 (577)
Q Consensus 208 ~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~--~gt~~y~aP 285 (577)
...++...++.++.|++.+|.|||+.+|+||||||+|||++ .++.+||+|||++............ .+|+.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT---VDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC---CCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 23467788999999999999999999999999999999998 4678999999999765443332222 348899999
Q ss_pred hhcccC---------------------C--CCCCchhhHHHHHHHHHhCCC-CCCCCChh----H-------HHHHHHhC
Q 008127 286 EVLKRK---------------------S--GPESDVWSIGVITYILLCGRR-PFWDKTED----G-------IFKEVLRN 330 (577)
Q Consensus 286 E~~~~~---------------------~--~~~~DiwSlG~il~el~tg~~-Pf~~~~~~----~-------~~~~i~~~ 330 (577)
|.+... + ..+.||||+|||+|+|++|.. ||.+.... . ..+.+...
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 986421 1 134799999999999999876 66432111 0 11111112
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCc---CCCCCHHHHhcCccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDP---RARLTAAQALSHPWVRE 375 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP---~~Rpt~~~il~hp~f~~ 375 (577)
.+....+..+++..++|+.+||..+| .+|+|+.++|+||||..
T Consensus 460 --~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 460 --KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred --CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 23334567789999999999999866 68999999999999975
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=289.05 Aligned_cols=254 Identities=30% Similarity=0.516 Sum_probs=203.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN---- 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 170 (577)
..+|.-++.+|.|+- .|-.|.|.-+++.||+|.+... ...........+|..++..+ +|+||++++.+|....
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~~l~~ 92 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQKTLEE 92 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhh-cccceeeeeeccCccccHHH
Confidence 347888999999999 7888999999999999987655 22234456678999999999 5999999999997543
Q ss_pred --eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 171 --YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+|+|||||. .+|...+. ..+.-..+..++.|++.|+.|||+.||+||||||+||++.
T Consensus 93 ~~e~y~v~e~m~-~nl~~vi~-------------------~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~ 152 (369)
T KOG0665|consen 93 FQEVYLVMELMD-ANLCQVIL-------------------MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVN 152 (369)
T ss_pred HHhHHHHHHhhh-hHHHHHHH-------------------HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceec
Confidence 5899999994 57766553 3356778899999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.+..+||.|||+|+.-...-..+.++.|..|+|||++.+ .+.+.+||||+||++.||++|...|.+.+.-+.+.++
T Consensus 153 ---~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki 229 (369)
T KOG0665|consen 153 ---SDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKI 229 (369)
T ss_pred ---chhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHH
Confidence 478999999999987665545678899999999998765 4678899999999999999999999876654444333
Q ss_pred Hh----------------------CCCCC---------CCCCCCC-------CCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LR----------------------NKPDF---------RRKPWPS-------ISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~----------------------~~~~~---------~~~~~~~-------~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. ..+++ +...|+. -+..+++++.+||..||++|++++++|+
T Consensus 230 ~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 230 IEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 21 11111 1111211 1235789999999999999999999999
Q ss_pred Ccccc
Q 008127 370 HPWVR 374 (577)
Q Consensus 370 hp~f~ 374 (577)
||||+
T Consensus 310 HPY~~ 314 (369)
T KOG0665|consen 310 HPYIK 314 (369)
T ss_pred CCeee
Confidence 99997
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=285.65 Aligned_cols=242 Identities=44% Similarity=0.761 Sum_probs=202.5
Q ss_pred CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCchhHH
Q 008127 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR 187 (577)
Q Consensus 108 ~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 187 (577)
+||.||+|.+..+|+.+|+|++....... ....+.+|+..++++ +|+||+++++.+......++++||+++++|.++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK--KRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc--HHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 58999999999899999999987654321 167899999999999 699999999999998999999999999999887
Q ss_pred HHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCccc
Q 008127 188 ILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~ 267 (577)
+... ..++...+..++.+++.++.|||+.+++|+||+|+||+++. ++.++|+|||.+...
T Consensus 78 ~~~~-----------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~---~~~~~l~d~~~~~~~ 137 (244)
T smart00220 78 LKKR-----------------GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE---DGHVKLADFGLARQL 137 (244)
T ss_pred HHhc-----------------cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC---CCcEEEccccceeee
Confidence 6432 23788999999999999999999999999999999999984 689999999999877
Q ss_pred CCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCC-CChhHHHHHHHhCCCCCCCCCCCCCCHH
Q 008127 268 KPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNS 345 (577)
Q Consensus 268 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 345 (577)
..........++..|+|||.+. ...+.++||||||+++++|++|..||.. .........+....... ...+..++..
T Consensus 138 ~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 216 (244)
T smart00220 138 DPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF-PPPEWKISPE 216 (244)
T ss_pred ccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC-ccccccCCHH
Confidence 6554555678899999999876 4557899999999999999999999977 44444444444333222 2222227889
Q ss_pred HHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 346 AKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 346 ~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
+.+++.+||..+|.+||++.++++||||
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 9999999999999999999999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=285.06 Aligned_cols=256 Identities=29% Similarity=0.444 Sum_probs=201.7
Q ss_pred eeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----eEE
Q 008127 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-----YVY 173 (577)
Q Consensus 99 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~~~ 173 (577)
+-.+.||.|+||.||.++|..+|+.||+|++..-.- .-...+.+.+|+.+|..++ |.|++..+++..... .+|
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq-~L~s~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQ-NLASCKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHH-HHHHHHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHHHHH
Confidence 345679999999999999999999999998754221 1235677899999999996 999999998876543 367
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|+|++. .+|...+ .....++..++.-+++||++||.|||+.+|.||||||.|.|+++ +
T Consensus 134 V~TELmQ-SDLHKII-----------------VSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS---N 192 (449)
T KOG0664|consen 134 VLTELMQ-SDLHKII-----------------VSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS---N 192 (449)
T ss_pred HHHHHHH-hhhhhee-----------------ccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc---C
Confidence 7777773 3443322 23477999999999999999999999999999999999999984 8
Q ss_pred CCeeEEecCCCcccCCCC--CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
..+||||||+|+...... .++..+-|..|+|||++.| .|+.++||||.|||+.||+..+..|+..++-+.+..|..
T Consensus 193 CvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItd 272 (449)
T KOG0664|consen 193 CILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIID 272 (449)
T ss_pred ceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHH
Confidence 899999999998765433 3455678999999999875 579999999999999999999999988887666555432
Q ss_pred -----------------------CCCCCCCCC--C-----CCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 -----------------------NKPDFRRKP--W-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 -----------------------~~~~~~~~~--~-----~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
+.+..+... + ..-..+...++.++|..||.+|++..+++.|++..+..
T Consensus 273 LLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 273 LLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred HhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 111111000 0 11223678999999999999999999999999987753
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=315.13 Aligned_cols=254 Identities=30% Similarity=0.496 Sum_probs=199.3
Q ss_pred eeeeeeecccCCeE-EEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 98 YTIGKLLGHGQFGY-TYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 98 y~~~~~lG~G~fg~-V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
|.-.+++|.|+.|+ ||+|. -.|+.||||++-.. ...-..+||..|+.-..|||||++|+.-.++.++||+.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGV--YEGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEe--eCCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 33456799999885 79996 56889999987543 44567899999998889999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC--CCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA--KEDS 254 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~--~~~~ 254 (577)
|+| ..+|.+++.... . ..........+.++.|++.||.+||+.+||||||||.||||+.. ....
T Consensus 583 ELC-~~sL~dlie~~~--~-----------d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ 648 (903)
T KOG1027|consen 583 ELC-ACSLQDLIESSG--L-----------DVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTL 648 (903)
T ss_pred hHh-hhhHHHHHhccc--c-----------chhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcce
Confidence 999 568998875420 0 00111124567889999999999999999999999999999864 2346
Q ss_pred CeeEEecCCCcccCCCC----CccccccCCccccchhcccCC-CCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~-~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
.++|+|||+++.+..+. ...+..||-+|+|||++.... ..++||||||||+|+.++ |.+||.+.-. .-.+|+
T Consensus 649 ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl 726 (903)
T KOG1027|consen 649 RAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANIL 726 (903)
T ss_pred eEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH--hhhhhh
Confidence 89999999999876543 234668999999999987654 678999999999999888 4999955432 334566
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+........ +....++.+||.+|++++|..||+|.++|.||+|=..
T Consensus 727 ~~~~~L~~L~-~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 727 TGNYTLVHLE-PLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred cCccceeeec-cCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 6655443221 1111289999999999999999999999999999654
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=261.82 Aligned_cols=216 Identities=25% Similarity=0.369 Sum_probs=181.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
...+..||+|+||.|-+.++..+|...|+|.+...-. .+..+...+|+++..+...+|.+|.+|+.+-.++.+||.||
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn--~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN--SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC--hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 4446679999999999999999999999999875432 45677889999998888889999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCcEEeecCCCCCCe
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrDlKp~NILl~~~~~~~~v 256 (577)
.|.. +| +.+..+ .+.++...+|.-+-+|+..++.||+|||++ .+||||+||+|||++ ..|.|
T Consensus 126 ~M~t-Sl-dkfy~~------------v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn---~~GqV 188 (282)
T KOG0984|consen 126 LMDT-SL-DKFYRK------------VLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILIN---YDGQV 188 (282)
T ss_pred Hhhh-hH-HHHHHH------------HHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEc---cCCcE
Confidence 9952 44 444333 345678899999999999999999999985 899999999999998 58999
Q ss_pred eEEecCCCcccCCCCCccccccCCccccchhccc-----CCCCCCchhhHHHHHHHHHhCCCCCCC-CChhHHHHHHHhC
Q 008127 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN 330 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwSlG~il~el~tg~~Pf~~-~~~~~~~~~i~~~ 330 (577)
|+||||.+..+.++-..+--.|...|||||.+.. .|+-++||||||++++||.+++.||.. .++.+.++++...
T Consensus 189 KiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 189 KICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred EEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 9999999988765544444578899999998863 467899999999999999999999975 4677788888765
Q ss_pred CC
Q 008127 331 KP 332 (577)
Q Consensus 331 ~~ 332 (577)
..
T Consensus 269 p~ 270 (282)
T KOG0984|consen 269 PS 270 (282)
T ss_pred CC
Confidence 43
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=292.35 Aligned_cols=256 Identities=30% Similarity=0.512 Sum_probs=201.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcC---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
+.+.|.++.+||.|+|+.||++.+.. ..+.||+|.+.... ....+.+|+++|..+.++.||+++.+++..++
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 34568999999999999999999887 78899999986543 44668999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+.+|+||++..+..+++ ..++...++.+++.++.||.++|.+|||||||||.|+|++.
T Consensus 109 ~v~ivlp~~~H~~f~~l~--------------------~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~- 167 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLY--------------------RSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR- 167 (418)
T ss_pred eeEEEecccCccCHHHHH--------------------hcCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc-
Confidence 999999999887766644 45678899999999999999999999999999999999985
Q ss_pred CCCCCeeEEecCCCccc-----------------CC--CC--------------------------CccccccCCccccc
Q 008127 251 KEDSSLKATDFGLSDFI-----------------KP--GK--------------------------KFQDIVGSAYYVAP 285 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~-----------------~~--~~--------------------------~~~~~~gt~~y~aP 285 (577)
..+.-.|+|||+|... .+ +. ......||++|+||
T Consensus 168 -~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaP 246 (418)
T KOG1167|consen 168 -RTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAP 246 (418)
T ss_pred -ccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCch
Confidence 5677899999998621 00 00 00124799999999
Q ss_pred hhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChh-HHHHHH--------------HhCC-----------------
Q 008127 286 EVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEV--------------LRNK----------------- 331 (577)
Q Consensus 286 E~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~i--------------~~~~----------------- 331 (577)
|++..- .++++||||.|||++.+++++.||.....+ +.+.++ +.+.
T Consensus 247 EvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~ 326 (418)
T KOG1167|consen 247 EVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRV 326 (418)
T ss_pred HHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHh
Confidence 998653 488999999999999999999999543211 000000 0000
Q ss_pred -------------CC--CCCCCCCC-CCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 332 -------------PD--FRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 332 -------------~~--~~~~~~~~-~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.. .....|.+ .+..+.+|+.+||+.||.+|+||+++|+||||.+.
T Consensus 327 ~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 327 NFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred chhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00 00111112 34478999999999999999999999999999953
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=304.84 Aligned_cols=260 Identities=28% Similarity=0.461 Sum_probs=217.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+...+|.++..+|.|+||.||+++++.+++..|+|+++... .....-+.+|+-+++..+ |||||.+++.|.....+
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep---~dd~~~iqqei~~~~dc~-h~nivay~gsylr~dkl 87 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP---GDDFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKL 87 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccC---CccccccccceeeeecCC-CcChHHHHhhhhhhcCc
Confidence 34568999999999999999999999999999999986543 234566788999998884 99999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
||+||||.||+|.+... -.+.+++.++.++++..+.||+|||+.|-+|||||-.|||++ +
T Consensus 88 wicMEycgggslQdiy~-----------------~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt---d 147 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYH-----------------VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT---D 147 (829)
T ss_pred EEEEEecCCCcccceee-----------------ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec---c
Confidence 99999999999987432 237899999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCC-CCccccccCCccccchhc----ccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~----~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.+.||+.|||.+..+... .+...++|||.|||||+- .+.|+..+|||++|+...|+.--++|..+..+...+...
T Consensus 148 ~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm 227 (829)
T KOG0576|consen 148 EGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM 227 (829)
T ss_pred cCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHh
Confidence 788999999998766432 334678999999999975 467899999999999999999988887776665554444
Q ss_pred HhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+..+..+. ..-...++.+.+|++.+|.++|++|||++.+|.|||....
T Consensus 228 TkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 228 TKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred hccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 333322221 2223467889999999999999999999999999998764
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=280.79 Aligned_cols=248 Identities=24% Similarity=0.378 Sum_probs=190.6
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHh-cCCCCeeEEEEEEEcC-
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDD- 169 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~~hpniv~~~~~~~~~- 169 (577)
..+.+...+.+.||+|.||+||+|.+ .|+.||||++... ....+.+|.+|.+.. ..|+||+.+++.=..+
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~ 278 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDN 278 (513)
T ss_pred HhhhheeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCC
Confidence 44667889999999999999999975 5889999998654 345678888887642 2599999999765432
Q ss_pred ---CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--------Cceec
Q 008127 170 ---NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--------GLVHR 238 (577)
Q Consensus 170 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~--------~iiHr 238 (577)
..+|||++|.+.|+|+|+|.+ ..++......++..++.||++||.. .|.||
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r------------------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHR 340 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNR------------------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHR 340 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhh------------------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcc
Confidence 269999999999999999853 5678899999999999999999963 49999
Q ss_pred cCCCCcEEeecCCCCCCeeEEecCCCcccCCCC-----CccccccCCccccchhcccCC-------CCCCchhhHHHHHH
Q 008127 239 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITY 306 (577)
Q Consensus 239 DlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~~~~DiwSlG~il~ 306 (577)
|||..|||+. .++.+-|+|+|||....... ..+..+||.+|||||++.... ...+||||||.|+|
T Consensus 341 DlKSKNILVK---kn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlW 417 (513)
T KOG2052|consen 341 DLKSKNILVK---KNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLW 417 (513)
T ss_pred ccccccEEEc---cCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHH
Confidence 9999999998 58999999999997654331 235679999999999997643 33589999999999
Q ss_pred HHHhC----------CCCCCCCCh----hHHHHHHHhCC--CCCCCCCCCCCC--HHHHHHHHHccccCcCCCCCHHHHh
Q 008127 307 ILLCG----------RRPFWDKTE----DGIFKEVLRNK--PDFRRKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 307 el~tg----------~~Pf~~~~~----~~~~~~i~~~~--~~~~~~~~~~~s--~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
|++.. ++||.+.-+ .+.++++..-. .+.....|...+ ..+..+|+.||..||..|.||-.+.
T Consensus 418 EiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 418 EIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred HHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 99863 678865422 23344433221 111223344332 2467899999999999999987654
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-35 Score=291.21 Aligned_cols=200 Identities=35% Similarity=0.633 Sum_probs=174.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhh-----HHHHHHHHHHHHHhc--CCCCeeEEEEEEEcC
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-----VEDVKREVKILQALA--GHENVVKFYNAFEDD 169 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~-----~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~ 169 (577)
.|..++.||.|+||+|++|.++.+...|+||.|.+.+...... .-.+-.||+||..|. .|+||++++++|+++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 4999999999999999999999999999999998865532221 223567999999984 399999999999999
Q ss_pred CeEEEEEecc-CCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 NYVYIAMELC-EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 ~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
+++||+||-- +|-+|++++.. ...++|.++..|+.||+.|+++||++||||||||-+|+.++
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~-----------------kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd 704 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEF-----------------KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVD 704 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhc-----------------cCccchHHHHHHHHHHHhccccccccCceecccccccEEEe
Confidence 9999999986 45678887743 47899999999999999999999999999999999999999
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-C-CCCCchhhHHHHHHHHHhCCCCCCC
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWD 317 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwSlG~il~el~tg~~Pf~~ 317 (577)
+ +|.+||+|||.|...+.+ .+..++||..|.|||++.|. | +.+-|||+||++||-+++..-||+.
T Consensus 705 ~---~g~~klidfgsaa~~ksg-pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 705 S---NGFVKLIDFGSAAYTKSG-PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred c---CCeEEEeeccchhhhcCC-CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 4 899999999999887744 56788999999999999875 3 8899999999999999999999853
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=304.09 Aligned_cols=262 Identities=25% Similarity=0.368 Sum_probs=206.5
Q ss_pred ceeeeeeecccCCeEEEEEEEc----C---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 97 RYTIGKLLGHGQFGYTYVATDK----A---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~----~---~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
+..+.+.||+|+||.|++|.-. . ....||||.+..... ....+.+..|+.+|+.+..||||+.+++++...
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 3466779999999999999643 1 145799998865543 256788999999999998999999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcC--CCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD--SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
+.+++|+|||..|+|.++|............. .... ..++..+...++.||+.|++||++..+|||||-..|||+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~---~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSG---VFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI 451 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccC---CCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe
Confidence 99999999999999999998763000000000 0011 248999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCcc--ccccC--Cccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCC-h
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQ--DIVGS--AYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKT-E 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~--~~~gt--~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~-~ 320 (577)
. ++..+||+|||+|+.......+. ...|+ ..|||||.+.. .++.++||||+||+|||+++ |..||.+.. .
T Consensus 452 ~---~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 452 T---KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred c---CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 8 57899999999999765544432 12232 34999998875 57999999999999999999 999998865 5
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+++..+..+ ..... ...+++++.++++.||+.+|++||+..++.+
T Consensus 529 ~~l~~~l~~G-~r~~~--P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 529 EELLEFLKEG-NRMEQ--PEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHHHHhcC-CCCCC--CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 5555534333 22222 2457899999999999999999999998865
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=280.40 Aligned_cols=239 Identities=27% Similarity=0.405 Sum_probs=186.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCC----e
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-GHENVVKFYNAFEDDN----Y 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-~hpniv~~~~~~~~~~----~ 171 (577)
..++.++||+|.||.||+|. .+++.||||++.. +..+.|.+|-+|..... .|+||++++++-.... .
T Consensus 211 pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred chhhHHHhhcCccceeehhh--ccCceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 46778899999999999995 5679999999854 36788999988876432 6999999998766444 7
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc---------CceeccCCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH---------GLVHRDMKP 242 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~---------~iiHrDlKp 242 (577)
++||++|.+.|+|.++|..+ .++.....+++.-+++||.|||+- .|+|||||.
T Consensus 283 ywLVt~fh~kGsL~dyL~~n------------------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkS 344 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKAN------------------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKS 344 (534)
T ss_pred eeEEeeeccCCcHHHHHHhc------------------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccc
Confidence 99999999999999999654 568888999999999999999962 599999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcccCCC-------CCCchhhHHHHHHHHHhCC
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSG-------PESDVWSIGVITYILLCGR 312 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~-------~~~DiwSlG~il~el~tg~ 312 (577)
.|||+. .+.++-|+|||+|..+.++.. ....+||.+|||||++.+..+ .+.||||+|.|||||++..
T Consensus 345 kNVLvK---~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC 421 (534)
T KOG3653|consen 345 KNVLVK---NDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRC 421 (534)
T ss_pred cceEEc---cCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999998 589999999999987765432 335799999999999987543 2479999999999999853
Q ss_pred C------------CCC-----CCChhHHHHHHHhCCC--CCCCCCCCC--CCHHHHHHHHHccccCcCCCCCHH
Q 008127 313 R------------PFW-----DKTEDGIFKEVLRNKP--DFRRKPWPS--ISNSAKDFVKKLLVKDPRARLTAA 365 (577)
Q Consensus 313 ~------------Pf~-----~~~~~~~~~~i~~~~~--~~~~~~~~~--~s~~~~~li~~~l~~dP~~Rpt~~ 365 (577)
. ||. ..+.+++...+...+. .++. .|.. -...+++.+..||..||+.|+|+.
T Consensus 422 ~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~-~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 422 TDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPD-AWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred ccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChh-hhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 2 332 1223344444444332 2221 1211 124578999999999999999985
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=328.76 Aligned_cols=240 Identities=20% Similarity=0.269 Sum_probs=182.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
..|.....||+|+||.||+|.+..+|..||||.+..... ....|+.+++++ +|||||+++++|...+..|+|
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~~lv 761 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKL-QHPNIVKLIGLCRSEKGAYLI 761 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhC-CCCCcceEEEEEEcCCCCEEE
Confidence 356677889999999999999989999999998864321 113468889999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hcCceeccCCCCcEEeecCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH---LHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH---~~~iiHrDlKp~NILl~~~~~ 252 (577)
|||+++|+|.+++. .+++..+..++.||+.||.||| +.+|+||||||+||+++.
T Consensus 762 ~Ey~~~g~L~~~l~--------------------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~--- 818 (968)
T PLN00113 762 HEYIEGKNLSEVLR--------------------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG--- 818 (968)
T ss_pred EeCCCCCcHHHHHh--------------------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC---
Confidence 99999999988762 3678888999999999999999 669999999999999984
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh--hHHHH---H
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFK---E 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~--~~~~~---~ 326 (577)
+...++. ||.+...... ....||+.|+|||++.+ .++.++|||||||++|||+||+.||..... ..+.. .
T Consensus 819 ~~~~~~~-~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~ 894 (968)
T PLN00113 819 KDEPHLR-LSLPGLLCTD---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARY 894 (968)
T ss_pred CCceEEE-eccccccccC---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHH
Confidence 4556654 6665443211 23378999999998765 468999999999999999999999853211 11111 1
Q ss_pred HHhCC-------CCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNK-------PDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~-------~~~~~~~--~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..... +...... ......++.+++.+||..||++|||+.++++.
T Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 895 CYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred hcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 11000 0000000 00111256789999999999999999999764
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=261.95 Aligned_cols=256 Identities=27% Similarity=0.416 Sum_probs=201.1
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEE-EEEcCCeE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYN-AFEDDNYV 172 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~-~~~~~~~~ 172 (577)
+.+.|.|.+.||+|.||.+.+|.++.++..+|+|.+.+.. ....+|.+|...--.|..|.||+..|+ .|+..+.+
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAY 97 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceE
Confidence 5568999999999999999999999999999999987664 357889999988778888999999887 57888899
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++++||+|.|+|.+-+. ...+-|.....++.|++.||.|+|+.++||||||.+|||+-.. +
T Consensus 98 vF~qE~aP~gdL~snv~------------------~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-d 158 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVE------------------AAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-D 158 (378)
T ss_pred EEeeccCccchhhhhcC------------------cccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-C
Confidence 99999999999987442 2457788899999999999999999999999999999999754 3
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCC--CCCCchhhHHHHHHHHHhCCCCCCCCChh-HHH-
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKS--GPESDVWSIGVITYILLCGRRPFWDKTED-GIF- 324 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~- 324 (577)
...|||||||+.+.....- ...--+..|.|||++. +++ .+.+|||.||+|+|.++||.+||+..... ..+
T Consensus 159 f~rvKlcDFG~t~k~g~tV--~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~ 236 (378)
T KOG1345|consen 159 FYRVKLCDFGLTRKVGTTV--KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYW 236 (378)
T ss_pred ccEEEeeecccccccCcee--hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHH
Confidence 5699999999987654322 2223456799999764 233 67789999999999999999999753322 222
Q ss_pred --HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCC---CCHHHHhcCcccc
Q 008127 325 --KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR---LTAAQALSHPWVR 374 (577)
Q Consensus 325 --~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R---pt~~~il~hp~f~ 374 (577)
.+.......-....+..+++.+..+.++-|..+|++| .++.......|..
T Consensus 237 ~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E 291 (378)
T KOG1345|consen 237 EWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE 291 (378)
T ss_pred HHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence 2223322222223345588999999999999999999 5555555555543
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=290.31 Aligned_cols=246 Identities=25% Similarity=0.337 Sum_probs=205.5
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
.+..++||.|+||+||+|.+...|+ +||||++.... .+....++..|+-+|.+| +|||++++++++.... +-
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASL-DHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcC-CCchHHHHhhhcccch-HH
Confidence 4557789999999999999866554 68999876543 245678899999999999 6999999999998765 88
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||++|+++|+|+|++... +..+-.+..+.|..||+.|+.|||.++++||||-..|||+.+ .
T Consensus 774 lvtq~mP~G~LlDyvr~h----------------r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks---P 834 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREH----------------RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS---P 834 (1177)
T ss_pred HHHHhcccchHHHHHHHh----------------hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC---C
Confidence 999999999999998654 467888999999999999999999999999999999999984 6
Q ss_pred CCeeEEecCCCcccCCCCC-ccccc--cCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKK-FQDIV--GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~-~~~~~--gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
.+|||+|||+|+...+... +.... -.+.|||-|.+. ..++.++|||||||++||++| |..|+.+....++-..+-
T Consensus 835 ~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle 914 (1177)
T KOG1025|consen 835 NHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLE 914 (1177)
T ss_pred CeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHh
Confidence 7899999999998765433 22222 244699999765 567999999999999999998 999999998888776665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+.. ... .|..+.++.-++.+||..|+..||+++++..
T Consensus 915 ~geR-Lsq--PpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 915 KGER-LSQ--PPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred cccc-CCC--CCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 5543 333 3568889999999999999999999988754
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=238.75 Aligned_cols=212 Identities=42% Similarity=0.742 Sum_probs=182.5
Q ss_pred ecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCc
Q 008127 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183 (577)
Q Consensus 104 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 183 (577)
||.|++|.||++.+..+++.+++|++....... ....+.+|+.+++.+. |++|+++++++......++++|++++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLN-HPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999988889999999987654211 3467899999999995 9999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+++... ...++...++.++.+++.+|.+||+.|++|+||+|.||+++. .++.++|+|||.
T Consensus 78 l~~~~~~~----------------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~--~~~~~~l~d~~~ 139 (215)
T cd00180 78 LKDLLKEN----------------EGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS--DNGKVKLADFGL 139 (215)
T ss_pred HHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC--CCCcEEEecCCc
Confidence 98876432 146889999999999999999999999999999999999983 157899999999
Q ss_pred CcccCCCC-CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCC
Q 008127 264 SDFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340 (577)
Q Consensus 264 a~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 340 (577)
+....... ......+...|++||.+.. .++.+.|+||+|+++++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------- 187 (215)
T cd00180 140 SKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------- 187 (215)
T ss_pred eEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------
Confidence 98664332 1334568889999998876 557899999999999999
Q ss_pred CCCHHHHHHHHHccccCcCCCCCHHHHhcCc
Q 008127 341 SISNSAKDFVKKLLVKDPRARLTAAQALSHP 371 (577)
Q Consensus 341 ~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp 371 (577)
..+.+++.+|+..+|.+||++.++++|+
T Consensus 188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 5688999999999999999999999875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-29 Score=239.54 Aligned_cols=211 Identities=41% Similarity=0.688 Sum_probs=177.1
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|.+.+.||.|++|.||+|.+..+++.+|+|.+...... .....+.+|+..++.+ +|+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEe
Confidence 56788999999999999999888999999998765432 2467889999999999 59999999999999899999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCC-CCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSR-YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
|+++++|.+.+... .. +++..+..++.+++.++.+||+.+++|+||+|.||+++. ++.+
T Consensus 78 ~~~~~~L~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~---~~~~ 137 (225)
T smart00221 78 YCEGGDLFDYLRKK-----------------GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGM---DGLV 137 (225)
T ss_pred ccCCCCHHHHHHhc-----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCE
Confidence 99999998876432 23 788999999999999999999999999999999999984 5899
Q ss_pred eEEecCCCcccCCCC--CccccccCCccccchhcc-c-CCCCCCchhhHHHHHHHHHhCCCCCCC-CChh-HHHHHHHhC
Q 008127 257 KATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-R-KSGPESDVWSIGVITYILLCGRRPFWD-KTED-GIFKEVLRN 330 (577)
Q Consensus 257 kl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwSlG~il~el~tg~~Pf~~-~~~~-~~~~~i~~~ 330 (577)
+|+|||++....... ......++..|++||.+. . .++.++||||||+++++|++|+.||.. .... .+...+..+
T Consensus 138 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~ 217 (225)
T smart00221 138 KLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFG 217 (225)
T ss_pred EEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcC
Confidence 999999998765432 334567889999999873 2 346799999999999999999999977 4443 555555554
Q ss_pred C
Q 008127 331 K 331 (577)
Q Consensus 331 ~ 331 (577)
.
T Consensus 218 ~ 218 (225)
T smart00221 218 V 218 (225)
T ss_pred C
Confidence 4
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-30 Score=294.59 Aligned_cols=198 Identities=21% Similarity=0.268 Sum_probs=145.4
Q ss_pred CCeeEEEEEE-------EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHH
Q 008127 157 ENVVKFYNAF-------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAE 229 (577)
Q Consensus 157 pniv~~~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~ 229 (577)
+||+.++++| .....++.++|++ +++|.+.|.. ....+++.+++.++.||+.||.|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~----------------~~~~~~~~~~~~i~~qi~~al~~ 95 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN----------------PDRSVDAFECFHVFRQIVEIVNA 95 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc----------------ccccccHHHHHHHHHHHHHHHHH
Confidence 5777777776 2234677888987 6699887632 13568999999999999999999
Q ss_pred HHhcCceeccCCCCcEEeecC----------------CCCCCeeEEecCCCcccCCCC-----------------Ccccc
Q 008127 230 CHLHGLVHRDMKPENFLFKSA----------------KEDSSLKATDFGLSDFIKPGK-----------------KFQDI 276 (577)
Q Consensus 230 LH~~~iiHrDlKp~NILl~~~----------------~~~~~vkl~DFGla~~~~~~~-----------------~~~~~ 276 (577)
||++|||||||||+||||+.. +.++.+||+|||+++...... .....
T Consensus 96 lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (793)
T PLN00181 96 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILA 175 (793)
T ss_pred HHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCccccccc
Confidence 999999999999999999631 234567888888876432100 01124
Q ss_pred ccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccc
Q 008127 277 VGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 355 (577)
Q Consensus 277 ~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~ 355 (577)
+||++|||||++.+ .++.++|||||||+||||++|.+|+.... .....+..... +.. +....+...+++.+||+
T Consensus 176 ~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~L~ 250 (793)
T PLN00181 176 MEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PPQ-ILLNWPKEASFCLWLLH 250 (793)
T ss_pred CCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--Chh-hhhcCHHHHHHHHHhCC
Confidence 68999999998764 56899999999999999999998875322 12222221111 111 11123567789999999
Q ss_pred cCcCCCCCHHHHhcCcccccc
Q 008127 356 KDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 356 ~dP~~Rpt~~~il~hp~f~~~ 376 (577)
++|.+|||+.++|+||||...
T Consensus 251 ~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 251 PEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred CChhhCcChHHHhhchhhhhh
Confidence 999999999999999999864
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=229.81 Aligned_cols=256 Identities=19% Similarity=0.229 Sum_probs=203.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC-----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-C
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-D 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 169 (577)
.|+++..++-+|.||.||.|.++... +.|-+|.+.... .+.....+..|--++..+. |||+..+.+++.. .
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~s-H~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGAS-HPNLLSVLGVSIEDY 360 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCc-CCCccceeEEEeecc
Confidence 36788889999999999999776432 346677765432 3456777888988888885 9999999998764 4
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
...++++.++..|+|..+|....... .+....++..+...++.|++.|++|||++||||.||-..|.+++
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~---------~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvId- 430 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDD---------PSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVID- 430 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCC---------CccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceeh-
Confidence 56788999999999988876332111 11235678888999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCCcc---ccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
+.-.|||+|=.+++.+-+..... ..--...|||||.+. ..++.++|+|||||++|||+| |+.||-.-++.++.
T Consensus 431 --d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~ 508 (563)
T KOG1024|consen 431 --DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME 508 (563)
T ss_pred --hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH
Confidence 57899999999998776543321 112245799999875 568999999999999999999 99999888888887
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.-+..+.. .. .+-++|.++..++..||...|++||+.+|+..
T Consensus 509 ~ylkdGyR-la--QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 509 HYLKDGYR-LA--QPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHhccce-ec--CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 76666542 22 22468999999999999999999999998754
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-29 Score=269.33 Aligned_cols=260 Identities=26% Similarity=0.405 Sum_probs=197.0
Q ss_pred cce-eeeeeecccCCeEEEEEEEcCCCCEEEEEEeccc--cc-CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN--KM-ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y-~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~--~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+.| ....++|.|++|.|+.+......+.++.|..... .. ........+..|+-+-..| .|||++..+..+.+...
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l-~h~~~~e~l~~~~~~~~ 395 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSL-SHPNIIETLDIVQEIDG 395 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccc-cCCchhhhHHHHhhccc
Confidence 345 4567899999999999988877777777755421 11 1111222256677777778 49999888777766555
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.+-+||||++ +|+..+... ..++..++-.++.|++.||.|+|+.||.||||||+|+++.
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~-----------------~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~--- 454 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSN-----------------GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT--- 454 (601)
T ss_pred chhhhhcccH-HHHHHHhcc-----------------cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---
Confidence 5555999999 998876432 5788999999999999999999999999999999999999
Q ss_pred CCCCeeEEecCCCcccCCC-----CCccccccCCccccchhcccC-C-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~-----~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||.+...... ......+|+..|+|||++.+. | ....||||.|++++.|++|+.||......+..
T Consensus 455 ~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~ 534 (601)
T KOG0590|consen 455 ENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNS 534 (601)
T ss_pred cCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccc
Confidence 5789999999998765322 223568999999999998765 4 56789999999999999999999654433221
Q ss_pred -HHHHhC----CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 325 -KEVLRN----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 325 -~~i~~~----~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
...... ...-+...+..++...+.+|.+||+.||.+|.|+++|++.+||+...
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 535 FKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred hhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 111100 01112223455788899999999999999999999999999999764
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-27 Score=211.92 Aligned_cols=248 Identities=20% Similarity=0.293 Sum_probs=196.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
...|+++++||.|+||.+|+|....+|..||||+-... . ..-.+..|..+.+.|++-+.|+.+..+..+..+-.+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-a----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK-A----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc-C----CCcchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence 35799999999999999999999999999999975433 2 223467899999999888899999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||+++ |-+|.+.+.- ....|+...++.++-|++.-++|+|.+++|||||||+|+|..-.....
T Consensus 89 VMdLL-GPsLEdLfnf----------------C~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~ 151 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLFNF----------------CSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCN 151 (341)
T ss_pred eeecc-CccHHHHHHH----------------HhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccc
Confidence 99998 7888875532 247789999999999999999999999999999999999997544566
Q ss_pred CeeEEecCCCcccCCCC--------CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCCh---hH
Q 008127 255 SLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE---DG 322 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~---~~ 322 (577)
.+.|+|||+|+...+.. .-....||..|.+-....+. .+..-|+-|+|.+|..+..|..||++-.. .+
T Consensus 152 kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~Q 231 (341)
T KOG1163|consen 152 KLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQ 231 (341)
T ss_pred eEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHH
Confidence 79999999998765432 22356899999998766553 47789999999999999999999987543 44
Q ss_pred HHHHHHhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCH
Q 008127 323 IFKEVLRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTA 364 (577)
Q Consensus 323 ~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~ 364 (577)
.++.|...+...+. ..+..+|.++.-.+..|=..--++-|..
T Consensus 232 KyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy 274 (341)
T KOG1163|consen 232 KYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDY 274 (341)
T ss_pred HHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcH
Confidence 55666655443332 2345677888888887765544555543
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-26 Score=229.71 Aligned_cols=255 Identities=22% Similarity=0.291 Sum_probs=191.8
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCC-CEEEEEEecccccCchhhHHHHHHHHHHHHHhc---CCCCeeEEEEEE-EcCCe
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALA---GHENVVKFYNAF-EDDNY 171 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~-~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~---~hpniv~~~~~~-~~~~~ 171 (577)
+|.+.+.||+|+||.||+|.+..++ ..+|+|......... ...+..|+.++..+. .-+++..+++.. ..+.+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 7999999999999999999987775 678888765542211 115778999999886 236999999999 57889
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.||||+++ |.+|.+..... ....++...+..++.|++.+|++||+.|+|||||||+|+++...+
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~---------------~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~ 159 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRN---------------PPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSS 159 (322)
T ss_pred eEEEEecc-CccHHHHHHhC---------------CCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCC
Confidence 99999999 88998854322 247899999999999999999999999999999999999998532
Q ss_pred CC--CCeeEEecCCCcccC---CCC-------C-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCC
Q 008127 252 ED--SSLKATDFGLSDFIK---PGK-------K-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWD 317 (577)
Q Consensus 252 ~~--~~vkl~DFGla~~~~---~~~-------~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~ 317 (577)
.. ..+.|.|||+|+... ... . ...+.||..|+++.+..+. .+.+.|+||++.++.+|+.|..||.+
T Consensus 160 ~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~ 239 (322)
T KOG1164|consen 160 RSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEA 239 (322)
T ss_pred CcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcc
Confidence 12 579999999998322 111 1 1235699999999988765 48999999999999999999999966
Q ss_pred CChhHHHHHHHhCCCCCCCC-CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 318 KTEDGIFKEVLRNKPDFRRK-PWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 318 ~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.........+.......... .....+.++.+++..+-..+...+|....+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 240 LEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred ccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 55332233322221111111 123345677788877777788888887766553
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-25 Score=225.74 Aligned_cols=259 Identities=36% Similarity=0.574 Sum_probs=205.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCC-CeeEEEEEEEcCCeEEEEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-NVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp-niv~~~~~~~~~~~~~lv~ 176 (577)
|.+.+.||.|+||.||++.+. ..+|+|.+.............+.+|+.++..+. |+ +|+.+++.+......++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLN-HPPNIVKLYDFFQDEGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHcc-CCcceeeEEEEEecCCEEEEEE
Confidence 788899999999999999877 789999987765443335778999999999996 66 8999999998888899999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC-C
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-S 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~-~ 255 (577)
+++.++++.+.+..... . ..+++..+..++.|++.++.|+|..+++|||+||+||+++. .. .
T Consensus 78 ~~~~~~~l~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~---~~~~ 140 (384)
T COG0515 78 EYVDGGSLEDLLKKIGR-------------K-GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDR---DGRV 140 (384)
T ss_pred ecCCCCcHHHHHHhccc-------------c-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecC---CCCe
Confidence 99999999854432200 0 36899999999999999999999999999999999999984 44 6
Q ss_pred eeEEecCCCcccCCCC-------CccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCCCh----
Q 008127 256 LKATDFGLSDFIKPGK-------KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTE---- 320 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-------~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~---- 320 (577)
++++|||++....... .....+||..|+|||.+.+ ......|+||+|++++++++|..||.....
T Consensus 141 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~ 220 (384)
T COG0515 141 VKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSAT 220 (384)
T ss_pred EEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccH
Confidence 9999999997554332 2456789999999998875 457889999999999999999999877653
Q ss_pred hHHHHHHHhCCCC-CCCCCCCCC----CHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 321 DGIFKEVLRNKPD-FRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 321 ~~~~~~i~~~~~~-~~~~~~~~~----s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
......+...... ......... ...+.+++..++..+|..|.+..+...++|.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 282 (384)
T COG0515 221 SQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLK 282 (384)
T ss_pred HHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCcc
Confidence 3444444433322 222211111 25789999999999999999999999997766543
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-27 Score=216.84 Aligned_cols=153 Identities=27% Similarity=0.343 Sum_probs=120.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchh
Q 008127 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 287 (577)
Q Consensus 208 ~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~ 287 (577)
...+++..++.++.||+.||.|||+++ ||+|||++ .++.+|+ ||++....... ..||+.|+|||+
T Consensus 11 ~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~---~~~~~~~--fG~~~~~~~~~----~~g~~~y~aPE~ 75 (176)
T smart00750 11 GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT---WDGLLKL--DGSVAFKTPEQ----SRVDPYFMAPEV 75 (176)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc---Cccceee--ccceEeecccc----CCCcccccChHH
Confidence 356999999999999999999999998 99999998 4788998 99998764322 268999999998
Q ss_pred ccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhCCCCCCC---CCCCCCCH--HHHHHHHHccccCcCC
Q 008127 288 LKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDFRR---KPWPSISN--SAKDFVKKLLVKDPRA 360 (577)
Q Consensus 288 ~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~~~~~~~~~---~~~~~~s~--~~~~li~~~l~~dP~~ 360 (577)
+.+ .++.++|||||||++|||++|+.||..... ...+..+......... .....++. .+.++|.+||..+|.+
T Consensus 76 ~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~ 155 (176)
T smart00750 76 IQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQR 155 (176)
T ss_pred hcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhccccc
Confidence 865 468899999999999999999999976543 2334444333222111 11122333 6999999999999999
Q ss_pred CCCHHHHhcCccccc
Q 008127 361 RLTAAQALSHPWVRE 375 (577)
Q Consensus 361 Rpt~~~il~hp~f~~ 375 (577)
|||+.++++|+|+..
T Consensus 156 Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 156 REAANHYLAHCRALF 170 (176)
T ss_pred ccCHHHHHHHHHHHH
Confidence 999999999999864
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=216.69 Aligned_cols=210 Identities=23% Similarity=0.429 Sum_probs=174.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
-.|+|+++||+|+||+++.|.+..++++||||.-.... .. -.+..|.+..+.|.+.++|...|-+-..+.+-.||
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-~A----PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-EA----PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC-Cc----chHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 37999999999999999999999999999999754432 12 34678889999998899999999877888888899
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC--CC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--ED 253 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~--~~ 253 (577)
+|++ |-+|.|.+.- ....|+...++.++.|++.-++|+|++.+|+|||||+|+||...+ ..
T Consensus 103 idLL-GPSLEDLFD~----------------CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~ 165 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDL----------------CGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDA 165 (449)
T ss_pred hhhh-CcCHHHHHHH----------------hcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCC
Confidence 9999 8888875531 368899999999999999999999999999999999999998532 34
Q ss_pred CCeeEEecCCCcccCCCC--------CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCC---Chh
Q 008127 254 SSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK---TED 321 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~---~~~ 321 (577)
..|.|+|||+|+...+.. ......||.+||+-....|. .+..-|+-|||-+++..+.|..||++- +..
T Consensus 166 n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK 245 (449)
T KOG1165|consen 166 NVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK 245 (449)
T ss_pred ceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchH
Confidence 579999999998765433 23456799999998765554 488899999999999999999999874 344
Q ss_pred HHHHHH
Q 008127 322 GIFKEV 327 (577)
Q Consensus 322 ~~~~~i 327 (577)
+.+++|
T Consensus 246 ~kYeKI 251 (449)
T KOG1165|consen 246 EKYEKI 251 (449)
T ss_pred HHHHHh
Confidence 455555
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.6e-28 Score=246.64 Aligned_cols=242 Identities=28% Similarity=0.478 Sum_probs=204.6
Q ss_pred eecccCCeEEEEEEE---cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEecc
Q 008127 103 LLGHGQFGYTYVATD---KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~---~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 179 (577)
.+|+|+||.|++++. ...|..+|+|+..+......... ....|..++...++||.+|++...++.++.+++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999998753 24567899998876544322222 56678888888877999999999999999999999999
Q ss_pred CCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEE
Q 008127 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259 (577)
Q Consensus 180 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~ 259 (577)
.||+|..++ .+...+.+...+.+...++.+++++|+.+|+|||+|++||+++ .+|++++.
T Consensus 80 rgg~lft~l-----------------~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld---~~Ghi~~t 139 (612)
T KOG0603|consen 80 RGGDLFTRL-----------------SKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLL---LEGHIKLT 139 (612)
T ss_pred ccchhhhcc-----------------ccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeec---ccCccccC
Confidence 999997655 3457788899999999999999999999999999999999998 58999999
Q ss_pred ecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008127 260 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 339 (577)
Q Consensus 260 DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 339 (577)
|||+++..-..+.. |||..|||||+++ .....+|+||+|++.++|+||..||.. ++...|+...+.++.
T Consensus 140 dfglske~v~~~~~---cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~--- 208 (612)
T KOG0603|consen 140 DFGLSKEAVKEKIA---CGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR--- 208 (612)
T ss_pred CchhhhHhHhhhhc---ccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch---
Confidence 99999876543332 9999999999998 447889999999999999999999977 788888887776664
Q ss_pred CCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCccccccC
Q 008127 340 PSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREGG 377 (577)
Q Consensus 340 ~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~~ 377 (577)
.++..+++++..++..+|..|.- +.++++|+||....
T Consensus 209 -~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~ 250 (612)
T KOG0603|consen 209 -ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSID 250 (612)
T ss_pred -hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeee
Confidence 35688999999999999999985 47999999998753
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=230.77 Aligned_cols=175 Identities=20% Similarity=0.272 Sum_probs=133.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcC-CCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHhcCCCCeeE-EEEEEEc
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVK-FYNAFED 168 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~-~~~~~~~ 168 (577)
.+...|.+.+.||+|+||+||+|+++. +++.||||++..... ........+.+|+++|++|. |+||+. ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-h~~iv~~l~~~--- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-GIGVVPQLLAT--- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-CCCCCcEEEEc---
Confidence 355689999999999999999998876 678889998753311 12234567999999999995 999885 4432
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccC-CCCcEEe
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM-KPENFLF 247 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDl-Kp~NILl 247 (577)
+..|+|||||+|++|.. +. ... ...++.|++.||.|||++||+|||| ||+|||+
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~--------------------~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv 145 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-AR--------------------PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLM 145 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hC--------------------ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE
Confidence 45899999999998852 10 001 1457889999999999999999999 9999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC---------CccccccCCccccchhcccCC-------CCCCchh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK---------KFQDIVGSAYYVAPEVLKRKS-------GPESDVW 299 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~-------~~~~Diw 299 (577)
+ .++.+||+|||+|+...... ......+++.|+|||.+.... +..+|-|
T Consensus 146 ~---~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 146 G---PDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred c---CCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 7 36789999999998654322 123567889999999986421 3456776
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-25 Score=239.82 Aligned_cols=223 Identities=30% Similarity=0.507 Sum_probs=174.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
....|..+++|..|+||.||.++++.+.+++|+| +.+.... .+. ++... +.|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li--------lRn--ilt~a-~npfvv------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI--------LRN--ILTFA-GNPFVV------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhc-ccccchh--------hhc--ccccc-CCccee-------------
Confidence 4457999999999999999999999999999994 5554321 111 23222 455555
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
|+-...+. .-+.++.. ++.+++|||+-||+|||+||+|.|++. -
T Consensus 136 --------gDc~tllk-----------------~~g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~---m 179 (1205)
T KOG0606|consen 136 --------GDCATLLK-----------------NIGPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITS---M 179 (1205)
T ss_pred --------chhhhhcc-----------------cCCCCcch--------hhHHhHhhccCCeecCCCCCCcceeee---c
Confidence 22222111 11333322 278999999999999999999999995 7
Q ss_pred CCeeEEecCCCcccCCC--------------CC--ccccccCCccccchhc-ccCCCCCCchhhHHHHHHHHHhCCCCCC
Q 008127 254 SSLKATDFGLSDFIKPG--------------KK--FQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFW 316 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~--------------~~--~~~~~gt~~y~aPE~~-~~~~~~~~DiwSlG~il~el~tg~~Pf~ 316 (577)
+++|++|||+++..-.. .. -...||||.|+|||++ ...|+.++|||++|+|+|+.+.|..||.
T Consensus 180 GhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpff 259 (1205)
T KOG0606|consen 180 GHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFF 259 (1205)
T ss_pred ccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeecc
Confidence 89999999998753111 01 1246899999999975 4678999999999999999999999999
Q ss_pred CCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC---CHHHHhcCccccccCC
Q 008127 317 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREGGD 378 (577)
Q Consensus 317 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp---t~~~il~hp~f~~~~~ 378 (577)
+.++++++..++.....++...+ .++++++++|.++|+.+|..|. .+-++.+|+||+...-
T Consensus 260 Gdtpeelfg~visd~i~wpE~de-a~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw 323 (1205)
T KOG0606|consen 260 GDTPEELFGQVISDDIEWPEEDE-ALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDW 323 (1205)
T ss_pred CCCHHHHHhhhhhhhccccccCc-CCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeeccc
Confidence 99999999999998888887744 5789999999999999999997 6778899999997643
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-24 Score=185.77 Aligned_cols=142 Identities=30% Similarity=0.533 Sum_probs=127.4
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~ 488 (577)
....++.+++++++++|..+|+|++|.|+..||..+| +.+|..+++.++.+||+.+|. +.|.|+|.+|+.+|.....
T Consensus 10 ~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~il-r~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~- 86 (160)
T COG5126 10 TFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKIL-RSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLK- 86 (160)
T ss_pred hcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHH-HHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhc-
Confidence 4467899999999999999999999999999999999 579999999999999999999 9999999999998865432
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
.... .++++.||+.||+|+||+|+..||+.+++.+| +++.+|+.+|.|+||.|+|+||++++...
T Consensus 87 -~~~~---~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~ 157 (160)
T COG5126 87 -RGDK---EEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDS 157 (160)
T ss_pred -cCCc---HHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhcc
Confidence 1222 24788999999999999999999999999988 49999999999999999999999988653
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-23 Score=191.43 Aligned_cols=189 Identities=18% Similarity=0.266 Sum_probs=143.3
Q ss_pred eeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch-hhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 99 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
.+...|+.|+||+||.+.. .+.+++.+.+.....+.. .+...+.+|+++|++|.+|++|++++++ +..|++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 4567899999999998853 678888887766544222 2233578999999999777899999886 34699999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccC-CCCcEEeecCCCCCCe
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM-KPENFLFKSAKEDSSL 256 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDl-Kp~NILl~~~~~~~~v 256 (577)
|+.|.+|...+. .. ...++.|++.+|.++|++||+|||| ||+|||++ .++.+
T Consensus 79 yI~G~~L~~~~~-----------------------~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i 131 (218)
T PRK12274 79 YLAGAAMYQRPP-----------------------RG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSP 131 (218)
T ss_pred eecCccHHhhhh-----------------------hh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCE
Confidence 999988854221 01 1347789999999999999999999 79999997 46789
Q ss_pred eEEecCCCcccCCCCCc--------------cccccCCccccchhcc--cCCC-CCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 257 KATDFGLSDFIKPGKKF--------------QDIVGSAYYVAPEVLK--RKSG-PESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 257 kl~DFGla~~~~~~~~~--------------~~~~gt~~y~aPE~~~--~~~~-~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
+|+|||+|......... .....++.|++|+... ...+ ...++++.|+-+|.++|+..|+++.+
T Consensus 132 ~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 132 AVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred EEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 99999999865433210 0123678888888432 2333 55688899999999999999998765
Q ss_pred h
Q 008127 320 E 320 (577)
Q Consensus 320 ~ 320 (577)
+
T Consensus 212 ~ 212 (218)
T PRK12274 212 E 212 (218)
T ss_pred C
Confidence 4
|
|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=186.61 Aligned_cols=143 Identities=29% Similarity=0.541 Sum_probs=124.8
Q ss_pred cchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccc
Q 008127 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 492 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~ 492 (577)
++.++..+++++|..||+|++|+|+..||..++ +.+|..+++.++..+++.+|.|++|.|+|+||+.++..........
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~l-r~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~ 80 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVL-RSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDE 80 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccc
Confidence 356778899999999999999999999999999 6699999999999999999999999999999998776533222211
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
. .....+++||+.||+|++|+|+++||+.+|...| +++.+++.+|.|+||.|+|+||+++|...
T Consensus 81 ~-~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~~ 150 (151)
T KOG0027|consen 81 E-ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSGK 150 (151)
T ss_pred c-ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhcC
Confidence 1 1134789999999999999999999999999888 49999999999999999999999999753
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=195.31 Aligned_cols=175 Identities=15% Similarity=0.128 Sum_probs=132.0
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHH------HHHHHHHHHHhcCCCCeeEEEEEE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED------VKREVKILQALAGHENVVKFYNAF 166 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~------~~~E~~~l~~l~~hpniv~~~~~~ 166 (577)
-+..+|+++++||.|+||.||++.. ++..+|||++.......+..... +.+|+..+.++ .||+|..+.+++
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~ 104 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFY 104 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEee
Confidence 3567999999999999999999754 57789999987554333333333 68999999999 599999999886
Q ss_pred EcC--------CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceec
Q 008127 167 EDD--------NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 238 (577)
Q Consensus 167 ~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHr 238 (577)
... +..+|||||++|.+|.+.. .+++ ..+.+++.+|..||..|++||
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~---------------------~~~~----~~~~~i~~~l~~lH~~gi~H~ 159 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMP---------------------EISE----DVKAKIKASIESLHQHGMVSG 159 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhh---------------------hccH----HHHHHHHHHHHHHHHcCCccC
Confidence 633 3589999999999886632 1222 245699999999999999999
Q ss_pred cCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHH
Q 008127 239 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILL 309 (577)
Q Consensus 239 DlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~ 309 (577)
|+||+||+++. ++ ++|+|||.+........... | ++...+..++|+||||+++..+.
T Consensus 160 Dikp~Nili~~---~g-i~liDfg~~~~~~e~~a~d~------~----vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 160 DPHKGNFIVSK---NG-LRIIDLSGKRCTAQRKAKDR------I----DLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCChHHEEEeC---CC-EEEEECCCcccccchhhHHH------H----HHHhHhcccccccceeEeehHHH
Confidence 99999999984 45 99999998765432111100 0 22344567899999999887654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=193.11 Aligned_cols=142 Identities=20% Similarity=0.215 Sum_probs=108.1
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchh-----------------------hHHHHHHHHHHHHHhcCCC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI-----------------------AVEDVKREVKILQALAGHE 157 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~~hp 157 (577)
...||+|+||.||+|.+. +|+.||||++......... ......+|+.++.++. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence 457999999999999986 8999999998654211000 0123346999999995 77
Q ss_pred CeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH-HhcCce
Q 008127 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLV 236 (577)
Q Consensus 158 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~L-H~~~ii 236 (577)
++.....+.... .+|||||++|+++..... ....++...++.++.|++.+|.|| |+.||+
T Consensus 80 ~v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~-----------------~~~~~~~~~~~~i~~qi~~~L~~l~H~~gii 140 (190)
T cd05147 80 GIPCPEPILLKS--HVLVMEFIGDDGWAAPRL-----------------KDAPLSESKARELYLQVIQIMRILYQDCRLV 140 (190)
T ss_pred CCCCCcEEEecC--CEEEEEEeCCCCCcchhh-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 764333222222 389999999877654322 235788999999999999999999 799999
Q ss_pred eccCCCCcEEeecCCCCCCeeEEecCCCccc
Q 008127 237 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 237 HrDlKp~NILl~~~~~~~~vkl~DFGla~~~ 267 (577)
||||||+|||++ ++.++|+|||+|...
T Consensus 141 HrDlkP~NIli~----~~~v~LiDFG~a~~~ 167 (190)
T cd05147 141 HADLSEYNLLYH----DGKLYIIDVSQSVEH 167 (190)
T ss_pred cCCCCHHHEEEE----CCcEEEEEccccccC
Confidence 999999999997 367999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-23 Score=200.57 Aligned_cols=241 Identities=23% Similarity=0.351 Sum_probs=151.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcC---------CCCeeEEEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG---------HENVVKFYNAFE 167 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~---------hpniv~~~~~~~ 167 (577)
.+...+.||.|+++.||.+++..||+.+|+|++...........+.+.+|.-....+.+ |-.++.-++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 46778899999999999999999999999998765543334466777777654443321 223333333221
Q ss_pred ------------cCC-----eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q 008127 168 ------------DDN-----YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 230 (577)
Q Consensus 168 ------------~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~L 230 (577)
... ..+++|+-+ -++|.+.+..-.. .-.....+.......+..|++..+++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~----------~~~~~~~l~~~arl~lT~Q~I~lvA~L 161 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFS----------RAQTHSPLAFAARLSLTVQMIRLVANL 161 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHH----------HTTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhh----------cccccchhHHHHHHHHHHHHHHHHHHH
Confidence 111 246788887 5688765532110 000001122223345668999999999
Q ss_pred HhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc---------CCCCCCchhhH
Q 008127 231 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---------KSGPESDVWSI 301 (577)
Q Consensus 231 H~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~DiwSl 301 (577)
|..|++|+||||+|++++ .+|.++|+||+...... ........+..|.|||.... .++.+.|.|+|
T Consensus 162 h~~GlVHgdi~~~nfll~---~~G~v~Lg~F~~~~r~g--~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~L 236 (288)
T PF14531_consen 162 HSYGLVHGDIKPENFLLD---QDGGVFLGDFSSLVRAG--TRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQL 236 (288)
T ss_dssp HHTTEEEST-SGGGEEE----TTS-EEE--GGGEEETT--EEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHH
T ss_pred hhcceEecccceeeEEEc---CCCCEEEcChHHHeecC--ceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHH
Confidence 999999999999999998 58999999998775443 22222345678999997643 23677899999
Q ss_pred HHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCC
Q 008127 302 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 361 (577)
Q Consensus 302 G~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R 361 (577)
|+++|.|.+|..||........... ....+.++|..++.||..+|++||.+|
T Consensus 237 G~~ly~lWC~~lPf~~~~~~~~~~~--------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 237 GITLYSLWCGRLPFGLSSPEADPEW--------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHHSS-STCCCGGGSTSGG--------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHHHccCCCCCCCccccccc--------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999999999965543221111 122234678999999999999999988
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.8e-23 Score=196.73 Aligned_cols=191 Identities=25% Similarity=0.414 Sum_probs=140.4
Q ss_pred cCCCCeeEEEEEEEc---------------------------CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhh
Q 008127 154 AGHENVVKFYNAFED---------------------------DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206 (577)
Q Consensus 154 ~~hpniv~~~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 206 (577)
..|||||.++..|.+ ...+|+||.-++ .+|.+++.
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~----------------- 334 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLW----------------- 334 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHh-----------------
Confidence 369999999887633 246899999884 47777663
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC-CCCCCeeEEecCCCcccCC-------CCCcccccc
Q 008127 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGLSDFIKP-------GKKFQDIVG 278 (577)
Q Consensus 207 ~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~-~~~~~vkl~DFGla~~~~~-------~~~~~~~~g 278 (577)
....+....+.++.|+++|+.|||.+||.|||||.+|||+.-. ++-..+.|+|||.+---+. ....-..-|
T Consensus 335 -~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GG 413 (598)
T KOG4158|consen 335 -TRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGG 413 (598)
T ss_pred -cCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCC
Confidence 2456778888999999999999999999999999999999743 2235688999997642211 111223457
Q ss_pred CCccccchhcccCC-------CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHH
Q 008127 279 SAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 351 (577)
Q Consensus 279 t~~y~aPE~~~~~~-------~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 351 (577)
...-||||+....+ ..++|.|+.|.+.||+++..-||++..+..+-..-.+ .-+.+ .....+++.+++++.
T Consensus 414 Na~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq-e~qLP-alp~~vpp~~rqlV~ 491 (598)
T KOG4158|consen 414 NAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ-ESQLP-ALPSRVPPVARQLVF 491 (598)
T ss_pred cceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh-hhhCC-CCcccCChHHHHHHH
Confidence 88899999987543 4589999999999999999999987543321111111 01111 122457899999999
Q ss_pred HccccCcCCCCCHH
Q 008127 352 KLLVKDPRARLTAA 365 (577)
Q Consensus 352 ~~l~~dP~~Rpt~~ 365 (577)
.+|+.||.+|+++.
T Consensus 492 ~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 492 DLLKRDPSKRVSPN 505 (598)
T ss_pred HHhcCCccccCCcc
Confidence 99999999999854
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.4e-22 Score=184.73 Aligned_cols=143 Identities=20% Similarity=0.242 Sum_probs=110.7
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc---------------------h--hhHHHHHHHHHHHHHhcCCC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---------------------P--IAVEDVKREVKILQALAGHE 157 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~---------------------~--~~~~~~~~E~~~l~~l~~hp 157 (577)
...||+|+||.||+|.+. +|+.||||++....... . .....+.+|...+.++. |+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-EA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence 467999999999999977 89999999987642110 0 01223468899999995 88
Q ss_pred CeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCce
Q 008127 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLV 236 (577)
Q Consensus 158 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~ii 236 (577)
++.....+.... .||||||++|+++..... ....++...+..++.|++.+|.++|+ .||+
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l-----------------~~~~~~~~~~~~i~~~l~~~l~~lH~~~giv 140 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRL-----------------KDVPLEEEEAEELYEQVVEQMRRLYQEAGLV 140 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhh-----------------hhccCCHHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 875444433332 489999999886543221 12457888999999999999999999 9999
Q ss_pred eccCCCCcEEeecCCCCCCeeEEecCCCcccC
Q 008127 237 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268 (577)
Q Consensus 237 HrDlKp~NILl~~~~~~~~vkl~DFGla~~~~ 268 (577)
||||||+|||++ ++.++|+|||+|....
T Consensus 141 HrDlkP~NIll~----~~~~~liDFG~a~~~~ 168 (190)
T cd05145 141 HGDLSEYNILYH----DGKPYIIDVSQAVELD 168 (190)
T ss_pred cCCCChhhEEEE----CCCEEEEEcccceecC
Confidence 999999999997 4689999999998764
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.4e-21 Score=181.65 Aligned_cols=138 Identities=21% Similarity=0.320 Sum_probs=107.5
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc----CCCCeeEEEEEEEcC---CeEE
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA----GHENVVKFYNAFEDD---NYVY 173 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~----~hpniv~~~~~~~~~---~~~~ 173 (577)
.+.||+|+||.||. ++.++.. +||++..... ...+.+.+|+.+++.|. +||||++++++++++ +.++
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 45799999999995 6777766 6998865432 24467899999999994 379999999999876 3544
Q ss_pred -EEEec--cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHH-HHHHhcCceeccCCCCcEEeec
Q 008127 174 -IAMEL--CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVA-AECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 174 -lv~e~--~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l-~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+|+|| +++|+|.+++.+ ..+++. ..++.|++.++ .|||+++||||||||+|||++.
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~------------------~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~ 140 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ------------------CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQR 140 (210)
T ss_pred EEEecCCCCcchhHHHHHHc------------------ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEec
Confidence 78999 558999987732 235555 35678888888 9999999999999999999985
Q ss_pred CC-CCCCeeEEecCCC
Q 008127 250 AK-EDSSLKATDFGLS 264 (577)
Q Consensus 250 ~~-~~~~vkl~DFGla 264 (577)
.+ .+..++|+||+.+
T Consensus 141 ~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 141 ISESEVIPVVCDNIGE 156 (210)
T ss_pred cCCCCCcEEEEECCCC
Confidence 32 2458999995433
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-22 Score=186.10 Aligned_cols=241 Identities=17% Similarity=0.191 Sum_probs=186.8
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
..++.+|.....|+.|+|++. |..+++|++....+. +.....|..|.-.|+-+. ||||+.+++.|.....+.++..
T Consensus 192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t-~risrdfneefp~lrifs-hpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVT-ARISRDFNEEFPALRIFS-HPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcc-hhhcchhhhhCcceeeec-CCchhhhhhhccCCCCceEeee
Confidence 455667899999999999865 556778887665543 334466888888888885 9999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCcEEeecCCCCCC
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~NILl~~~~~~~~ 255 (577)
||+.|+|+..|... ..--....++..++.+|++|+.|||+.. |.---|....++++ ++.+
T Consensus 268 ~mp~gslynvlhe~---------------t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmid---edlt 329 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQ---------------TSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMID---EDLT 329 (448)
T ss_pred eccchHHHHHHhcC---------------ccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEec---chhh
Confidence 99999999988654 1233566789999999999999999963 44446888889998 3444
Q ss_pred eeE--EecCCCcccCCCCCccccccCCccccchhcccCC----CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 256 LKA--TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 256 vkl--~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
.+| +|--++... ....-.|.||+||.+..++ -.++|+|||++++|||.|...||.+-++.+.-.+|..
T Consensus 330 arismad~kfsfqe------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial 403 (448)
T KOG0195|consen 330 ARISMADTKFSFQE------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL 403 (448)
T ss_pred hheecccceeeeec------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh
Confidence 444 343222111 1223468899999997654 3578999999999999999999999888887777755
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
..... ...|.++..+..|+.-|+..||.+||....++
T Consensus 404 eglrv--~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 404 EGLRV--HIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred ccccc--cCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 44432 33478999999999999999999999876653
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-22 Score=215.52 Aligned_cols=245 Identities=24% Similarity=0.298 Sum_probs=170.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc-CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM-ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.|...+.||.+.|=+|.+|++. .| .|+||++-+... ..-....+...|++ . .+.+|||++.+.-+...+...|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~-~l~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-F-ALMKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-H-HhhcCCcccchHHHHHhhHHHHHH
Confidence 5778889999999999999865 35 499999866542 11112233334444 2 333699999988777777888889
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
-+|. ..+|+|+|- -+..+..-+.+-|+.||+.||.-+|..||+|+|||.+|||+++ -.-
T Consensus 100 Rqyv-khnLyDRlS-----------------TRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTS---WNW 158 (1431)
T KOG1240|consen 100 RQYV-KHNLYDRLS-----------------TRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITS---WNW 158 (1431)
T ss_pred HHHH-hhhhhhhhc-----------------cchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEee---ech
Confidence 8988 458888763 2355677788889999999999999999999999999999995 557
Q ss_pred eeEEecCCCcccC--C--CCCcc----ccccCCccccchhcccC------------CCCCCchhhHHHHHHHHHh-CCCC
Q 008127 256 LKATDFGLSDFIK--P--GKKFQ----DIVGSAYYVAPEVLKRK------------SGPESDVWSIGVITYILLC-GRRP 314 (577)
Q Consensus 256 vkl~DFGla~~~~--~--~~~~~----~~~gt~~y~aPE~~~~~------------~~~~~DiwSlG~il~el~t-g~~P 314 (577)
+.|+||..-+..- . ...+. +..--..|+|||.+... ..++.||||+||+++||++ |++|
T Consensus 159 ~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~Pl 238 (1431)
T KOG1240|consen 159 LYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPL 238 (1431)
T ss_pred hhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCc
Confidence 9999998765321 1 11121 11222359999987431 2467899999999999998 7899
Q ss_pred CCCCChhHHHHHHHhCCCCCCCCCCCC-CCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 315 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 315 f~~~~~~~~~~~i~~~~~~~~~~~~~~-~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
|.- ..+-.+.++....+...... -+..++.+|..|++.||.+|.+|++.|+.
T Consensus 239 F~L----SQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 239 FTL----SQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ccH----HHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 821 01111111110000000000 12358899999999999999999999885
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-20 Score=205.92 Aligned_cols=196 Identities=24% Similarity=0.359 Sum_probs=156.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEcCCeE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~ 172 (577)
...|.|.+.||.|+||+||+|.+.. |+.||+|+-.....|.---.. +++.+|+ --|-|..+..++...+.-
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~------q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICL------QVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehH------HHHHhhchhhhcchHHHHHHHccCCcc
Confidence 3579999999999999999999766 999999976555443221122 2233331 135566666666667778
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC--
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-- 250 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~-- 250 (577)
++|+||.+.|+|++.+. ..+.+++..+..+..|++..|+.||..+|||+||||+|+||...
T Consensus 770 ~lv~ey~~~Gtlld~~N-----------------~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~ 832 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN-----------------TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREIC 832 (974)
T ss_pred eeeeeccccccHHHhhc-----------------cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccC
Confidence 89999999999999763 34778899999999999999999999999999999999999642
Q ss_pred --CCCCCeeEEecCCCccc---CCCCCccccccCCccccchhcccCC-CCCCchhhHHHHHHHHHhCCCC
Q 008127 251 --KEDSSLKATDFGLSDFI---KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP 314 (577)
Q Consensus 251 --~~~~~vkl~DFGla~~~---~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~DiwSlG~il~el~tg~~P 314 (577)
.....++|+|||.|..+ .++..+...++|-.+-.+|+..|++ +..+|.|.|+.+++.|+.|+.-
T Consensus 833 ~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 833 ADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred CCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 23567999999998654 4556778889999999999998865 8899999999999999998653
|
|
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.1e-20 Score=154.56 Aligned_cols=141 Identities=27% Similarity=0.483 Sum_probs=126.2
Q ss_pred ccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
...+.+++..+++..|..||.+++|+|+..||..++ +++|+.+...++..|+..+|.++.|.|+|++|..++.......
T Consensus 24 ~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAm-ralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~ 102 (172)
T KOG0028|consen 24 KSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAM-RALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGER 102 (172)
T ss_pred CccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHH-HHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhcc
Confidence 345677888999999999999999999999999999 6799999999999999999999999999999999876543322
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
. + ...++.+|+.+|.|++|.||..+|+.+...+| ++.+|++++|.|+||.|+-+||..+|++
T Consensus 103 d--t---~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 103 D--T---KEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred C--c---HHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 2 2 34788999999999999999999999998888 4899999999999999999999999975
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-19 Score=174.97 Aligned_cols=146 Identities=24% Similarity=0.231 Sum_probs=112.1
Q ss_pred ceeeeeeecccCCeEEEEEE-EcCCCCEEEEEEecccccCc-------------------h--hhHHHHHHHHHHHHHhc
Q 008127 97 RYTIGKLLGHGQFGYTYVAT-DKANGDRVAVKKIEKNKMIL-------------------P--IAVEDVKREVKILQALA 154 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~-~~~~~~~vaiK~i~~~~~~~-------------------~--~~~~~~~~E~~~l~~l~ 154 (577)
-|.+.+.||+|+||.||+|. +..+|+.||||++....... + .....+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999998 67799999999986542100 0 01234678999999995
Q ss_pred CC--CCeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh
Q 008127 155 GH--ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL 232 (577)
Q Consensus 155 ~h--pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~ 232 (577)
+ ..+++++++ . ..++||||++|++|..... ....+....+..++.||+.+|.+||.
T Consensus 109 -~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~-----------------~~~~~~~~~~~~i~~qi~~~l~~LH~ 166 (237)
T smart00090 109 -EAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRL-----------------KDVEPEEEEEFELYDDILEEMRKLYK 166 (237)
T ss_pred -hcCCCCCeeeEe---c-CceEEEEEecCCccccccc-----------------ccCCcchHHHHHHHHHHHHHHHHHHh
Confidence 4 334444442 2 3589999999988765321 12445666778999999999999999
Q ss_pred cC-ceeccCCCCcEEeecCCCCCCeeEEecCCCcccC
Q 008127 233 HG-LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268 (577)
Q Consensus 233 ~~-iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~ 268 (577)
.| |+||||||+||+++ ++.++|+|||.|....
T Consensus 167 ~g~iiH~Dikp~NIli~----~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 167 EGELVHGDLSEYNILVH----DGKVVIIDVSQSVELD 199 (237)
T ss_pred cCCEEeCCCChhhEEEE----CCCEEEEEChhhhccC
Confidence 99 99999999999997 4679999999987543
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-21 Score=209.26 Aligned_cols=260 Identities=28% Similarity=0.489 Sum_probs=208.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..|.+.+.||+|+|+.|-.+.... +...+|+|.+.... ...........|..+-..+..|+|++.+++........++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 358888999999999998887643 34467777665442 1233455566788887777669999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCC-CCCHHHHHHHHHHHHHHHHHHH-hcCceeccCCCCcEEeecCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS-RYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~i~~qil~~l~~LH-~~~iiHrDlKp~NILl~~~~~ 252 (577)
+++|..|+++.+.+. .... ..+...+..++.|+..++.|+| ..++.||||||+|.+++.
T Consensus 99 ~~~~s~g~~~f~~i~----------------~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~--- 159 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKIS----------------HPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE--- 159 (601)
T ss_pred ccCcccccccccccc----------------cCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc---
Confidence 999999999987541 1122 5777888999999999999999 999999999999999984
Q ss_pred CC-CeeEEecCCCcccCC-CC---Ccccccc-CCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChh-HH
Q 008127 253 DS-SLKATDFGLSDFIKP-GK---KFQDIVG-SAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTED-GI 323 (577)
Q Consensus 253 ~~-~vkl~DFGla~~~~~-~~---~~~~~~g-t~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~ 323 (577)
.+ .+++.|||+|..... .. .....+| ++.|+|||.+.+. ..+..|+||+|+++.-+++|..|+...... ..
T Consensus 160 s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~ 239 (601)
T KOG0590|consen 160 SGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR 239 (601)
T ss_pred CCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc
Confidence 55 899999999987654 22 2345688 9999999988773 378899999999999999999998654332 23
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
+.........+...+|..++....+++.+++..+|..|.+.+++-.+||+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 240 YSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ceeecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 3333443344456678889999999999999999999999999999999988
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.6e-19 Score=180.71 Aligned_cols=199 Identities=25% Similarity=0.337 Sum_probs=154.5
Q ss_pred HHhcCCCCeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q 008127 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 230 (577)
Q Consensus 151 ~~l~~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~L 230 (577)
+.+ .|.|+.++++.+.++...++|.+||+.|+|.|.+... ...+..--...++++|+.||.||
T Consensus 2 ~~l-~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~----------------~~~~d~~F~~s~~rdi~~Gl~yl 64 (484)
T KOG1023|consen 2 RQL-DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE----------------DIKLDYFFILSFIRDISKGLAYL 64 (484)
T ss_pred ccc-chhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc----------------ccCccHHHHHHHHHHHHHHHHHH
Confidence 456 4999999999999999999999999999999987542 34566666778899999999999
Q ss_pred HhcCc-eeccCCCCcEEeecCCCCCCeeEEecCCCcccCCC---CCccccccCCccccchhcccC--------CCCCCch
Q 008127 231 HLHGL-VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK--------SGPESDV 298 (577)
Q Consensus 231 H~~~i-iHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~--------~~~~~Di 298 (577)
|.-.| .|+.|++.|.+++ ....+||+|||+....... .......-...|.|||.+.+. .+.+.||
T Consensus 65 h~s~i~~hg~l~s~nClvd---~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdi 141 (484)
T KOG1023|consen 65 HNSPIGYHGALKSSNCLVD---SRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDI 141 (484)
T ss_pred hcCcceeeeeeccccceee---eeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCe
Confidence 99766 9999999999999 4889999999998776421 111222344569999998753 3567999
Q ss_pred hhHHHHHHHHHhCCCCCCCC----ChhHHHHHHHhCCCCCCCCCCC---CCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 299 WSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWP---SISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 299 wSlG~il~el~tg~~Pf~~~----~~~~~~~~i~~~~~~~~~~~~~---~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
||+|++++|+++...||... ...++...+..+.....++... .+++++..++..||..+|..||+++++-.
T Consensus 142 Ys~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 142 YSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred ehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 99999999999999999652 2235555555522222222211 35567999999999999999999998754
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-19 Score=183.32 Aligned_cols=178 Identities=24% Similarity=0.411 Sum_probs=134.1
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
.++||.|++|.-.+|.+.|.... .....+....+.++.|+..|++| ++.+|||+||.||.+.
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~--------------~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~- 390 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRR--------------TGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS- 390 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCC--------------cccccchhHHHHHHHhhccchhh---ccchhhhccccccccc-
Confidence 46899999999999998775331 22445677788999999999999 9999999999999997
Q ss_pred CCCCCCeeEEecCCCcccCCCC-------CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCCh
Q 008127 250 AKEDSSLKATDFGLSDFIKPGK-------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTE 320 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~ 320 (577)
.+..+||.|||+........ .....+||++||+||.+.+ .|+.++||||||+||+||++ =..+|...
T Consensus 391 --~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~-- 466 (516)
T KOG1033|consen 391 --DDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI-- 466 (516)
T ss_pred --cchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH--
Confidence 46689999999987665443 4567799999999998875 67999999999999999998 33333111
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
..+..+-.+ .++...+.+. +.-..|+..||...|.+||++.+.--|+|.
T Consensus 467 -~t~~d~r~g--~ip~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 467 -ATLTDIRDG--IIPPEFLQDY-PEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred -HhhhhhhcC--CCChHHhhcC-cHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 112222222 2222222233 345689999999999999988877777774
|
|
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-18 Score=157.18 Aligned_cols=142 Identities=27% Similarity=0.499 Sum_probs=122.6
Q ss_pred ccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
...++++++++++.+|..+|.+++|.|+..||..+|. .+|..++...+..++..+|.+++|.|+|+||+.++.....
T Consensus 8 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~-~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~-- 84 (158)
T PTZ00183 8 RPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMR-SLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLG-- 84 (158)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhc--
Confidence 3457888999999999999999999999999999995 5788888899999999999999999999999987654221
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
.... ...++.+|+.+|+|++|+|+.+||..++...+ ++..+|..+|.|++|.|+|+||+.+|++.
T Consensus 85 ~~~~---~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 155 (158)
T PTZ00183 85 ERDP---REEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKKT 155 (158)
T ss_pred CCCc---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 1111 24678899999999999999999999887655 48999999999999999999999999863
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-18 Score=155.34 Aligned_cols=141 Identities=29% Similarity=0.554 Sum_probs=120.7
Q ss_pred ccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
...++++++++++..|..+|.+++|.|+.+||..++. .++..+..+.+..+++.+|.+++|.|+|+||+.++.......
T Consensus 2 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~ 80 (149)
T PTZ00184 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDT 80 (149)
T ss_pred CCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCC
Confidence 3457788899999999999999999999999999995 478888889999999999999999999999998765432111
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
. ....+..+|+.+|.|++|+|+.+||+.++...+ ++..++..+|.+++|.|+|+||+.+|..
T Consensus 81 --~---~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 81 --D---SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMS 148 (149)
T ss_pred --c---HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHhc
Confidence 1 123577899999999999999999999886554 4888999999999999999999998863
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.5e-18 Score=161.28 Aligned_cols=137 Identities=26% Similarity=0.365 Sum_probs=111.1
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCch-----hhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
+.||+|++|.||+|.+ +|..|++|.........+ .....+.+|+.++..+. |++|+....++...+..++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeCCCCEEEE
Confidence 5799999999999975 778899997654332111 12345788999999995 888877777777777889999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++|++|.+.+... .. ....++.+++.+|.++|..|++|||++|.|||++ ++.+
T Consensus 79 e~~~G~~L~~~~~~~--------------------~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~ 133 (211)
T PRK14879 79 EYIEGEPLKDLINSN--------------------GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKI 133 (211)
T ss_pred EEeCCcCHHHHHHhc--------------------cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCE
Confidence 999999998765321 11 6788999999999999999999999999999997 5679
Q ss_pred eEEecCCCcc
Q 008127 257 KATDFGLSDF 266 (577)
Q Consensus 257 kl~DFGla~~ 266 (577)
+|+|||++..
T Consensus 134 ~liDf~~a~~ 143 (211)
T PRK14879 134 YLIDFGLAEF 143 (211)
T ss_pred EEEECCcccC
Confidence 9999999875
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.1e-18 Score=159.17 Aligned_cols=139 Identities=24% Similarity=0.318 Sum_probs=106.0
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch-------------------hhHHHHHHHHHHHHHhcCCC-
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-------------------IAVEDVKREVKILQALAGHE- 157 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-------------------~~~~~~~~E~~~l~~l~~hp- 157 (577)
|.+.+.||.|+||.||+|.+. +|+.||||++........ .......+|+.++..+. |+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-HcC
Confidence 778899999999999999864 899999998765321000 11223678899999984 66
Q ss_pred -CeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCce
Q 008127 158 -NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 236 (577)
Q Consensus 158 -niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~ii 236 (577)
.++..++ ....++||||++|++|..... ......++.+++.++.++|..||+
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~-----------------------~~~~~~~~~~i~~~l~~lh~~gi~ 147 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRV-----------------------LEDPEEVLDEILEEIVKAYKHGII 147 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhccc-----------------------cccHHHHHHHHHHHHHHHHHCCCC
Confidence 3444443 234589999999988754210 134567889999999999999999
Q ss_pred eccCCCCcEEeecCCCCCCeeEEecCCCcccC
Q 008127 237 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268 (577)
Q Consensus 237 HrDlKp~NILl~~~~~~~~vkl~DFGla~~~~ 268 (577)
||||||+||+++ +++.++|+|||++....
T Consensus 148 H~Dl~p~Nill~---~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 148 HGDLSEFNILVD---DDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cCCCCcccEEEc---CCCcEEEEECCccccCC
Confidence 999999999998 47899999999996544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=157.52 Aligned_cols=134 Identities=25% Similarity=0.333 Sum_probs=104.6
Q ss_pred eecccCCeEEEEEEEcCCCCEEEEEEecccccCc-----hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-----PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~-----~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
.||+|+||.||+|. .+|..|++|......... ......+.+|++++..+. |+++.....++...+..++|||
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEEEEE
Confidence 48999999999997 467899999865432211 112466788999999995 7765544444555666789999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|++|++|.+.+... . ..++.+++.+|.+||+.|++|||++|.||+++ ++.++
T Consensus 78 ~~~g~~l~~~~~~~-----------------~-------~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~ 129 (199)
T TIGR03724 78 YIEGKPLKDVIEEG-----------------N-------DELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLY 129 (199)
T ss_pred EECCccHHHHHhhc-----------------H-------HHHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEE
Confidence 99999998755321 0 06889999999999999999999999999997 57799
Q ss_pred EEecCCCccc
Q 008127 258 ATDFGLSDFI 267 (577)
Q Consensus 258 l~DFGla~~~ 267 (577)
++|||++...
T Consensus 130 liDfg~a~~~ 139 (199)
T TIGR03724 130 LIDFGLGKYS 139 (199)
T ss_pred EEECCCCcCC
Confidence 9999998764
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=140.22 Aligned_cols=135 Identities=24% Similarity=0.428 Sum_probs=120.1
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..|.+.++.+++++|..+|.|+||.|++++|+..|. .+|..+++++++.|+++ +.|.|+|.-|+.++-.. +..
T Consensus 24 amf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~a-SlGk~~~d~elDaM~~E----a~gPINft~FLTmfGek--L~g 96 (171)
T KOG0031|consen 24 AMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLA-SLGKIASDEELDAMMKE----APGPINFTVFLTMFGEK--LNG 96 (171)
T ss_pred HHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHH-HcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHH--hcC
Confidence 457889999999999999999999999999999995 59999999999999986 68899999999877543 222
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
.+. ...+..||+.||.+++|.|..+.|+++|...| +++.+++.+-.|..|.|+|.+|+.++.
T Consensus 97 tdp---e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 97 TDP---EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred CCH---HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 222 24678899999999999999999999999988 599999999999999999999999997
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=179.09 Aligned_cols=142 Identities=24% Similarity=0.305 Sum_probs=111.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC-----chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-----LPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-----~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
....|...+.||+|+||.||+|.+. +..+++|+....... .....+.+.+|++++..+. |++++....++..
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~ 407 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-RAGVPTPVIYDVD 407 (535)
T ss_pred cccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-ccCCCeeEEEEEe
Confidence 3445667889999999999999754 344555543221111 1123456889999999995 9999888777777
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
....++||||++|++|.+.+. ....++.+++.+|.+||+.||+||||||+|||++
T Consensus 408 ~~~~~lv~E~~~g~~L~~~l~-------------------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~ 462 (535)
T PRK09605 408 PEEKTIVMEYIGGKDLKDVLE-------------------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR 462 (535)
T ss_pred CCCCEEEEEecCCCcHHHHHH-------------------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE
Confidence 777899999999999987652 2356889999999999999999999999999994
Q ss_pred cCCCCCCeeEEecCCCccc
Q 008127 249 SAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~ 267 (577)
++.++|+|||+++..
T Consensus 463 ----~~~~~liDFGla~~~ 477 (535)
T PRK09605 463 ----DDRLYLIDFGLGKYS 477 (535)
T ss_pred ----CCcEEEEeCcccccC
Confidence 568999999999764
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-17 Score=152.12 Aligned_cols=141 Identities=25% Similarity=0.278 Sum_probs=100.1
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHH---------------------HHHHHHHHHHHhcCC-CC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------------------DVKREVKILQALAGH-EN 158 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~---------------------~~~~E~~~l~~l~~h-pn 158 (577)
.+.||+|+||.||+|.+. +|+.||||++............ ....|...+..+..+ ..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 567999999999999976 8999999988654321111111 114566677776422 22
Q ss_pred eeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCcee
Q 008127 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVH 237 (577)
Q Consensus 159 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiH 237 (577)
+.+.++. ...++||||++|+.+....... ... ...+..++.+++.++.++|. .+|+|
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~-----------------~~~-~~~~~~~~~~~~~~l~~lh~~~~ivH 138 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKD-----------------VRL-LEDPEELYDQILELMRKLYREAGLVH 138 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhh-----------------hhh-cccHHHHHHHHHHHHHHHhhccCcCc
Confidence 4444443 2358999999996654322111 000 15678899999999999999 99999
Q ss_pred ccCCCCcEEeecCCCCCCeeEEecCCCcccC
Q 008127 238 RDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268 (577)
Q Consensus 238 rDlKp~NILl~~~~~~~~vkl~DFGla~~~~ 268 (577)
|||||+||+++ ++.++|+|||.+....
T Consensus 139 ~Dl~p~Nili~----~~~~~liDfg~a~~~~ 165 (187)
T cd05119 139 GDLSEYNILVD----DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCCChhhEEEE----CCcEEEEECccccccc
Confidence 99999999997 5789999999997554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-17 Score=135.94 Aligned_cols=139 Identities=21% Similarity=0.324 Sum_probs=118.9
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC--CCcceehhhHHHHHhhhhhhc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d--~dg~i~f~EF~~~~~~~~~~~ 489 (577)
.+++++..+++++|..||..+||+|+..++..+| +++|.+|++.++.+....++.+ +-..|+|++|+.++.......
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvl-RalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk 82 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVL-RALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNK 82 (152)
T ss_pred ccCcchHHHHHHHHHHHhccCcccccHHHHHHHH-HHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcc
Confidence 3566788999999999999999999999999999 7899999999999999998877 457899999999887655443
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
..... +...+-++.||++++|.|...||+.+|.++| +++.++... .|.+|.|.|++|++.+.
T Consensus 83 ~q~t~---edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 83 DQGTY---EDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred ccCcH---HHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence 33332 3566789999999999999999999999998 478888765 47899999999998764
|
|
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.4e-17 Score=145.93 Aligned_cols=137 Identities=29% Similarity=0.474 Sum_probs=114.7
Q ss_pred cccchHHHhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcc-eehhhHHHHHhhhhhh
Q 008127 411 STLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVAATLHVHQL 488 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d-~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~-i~f~EF~~~~~~~~~~ 488 (577)
+.++..++..|..+|.++|.+ ++|+|+.+||..+.. +.. +...++++..+|.+++|. |+|++|+..+......
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~--~~~---Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~ 99 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPE--LAL---NPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPK 99 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHH--Hhc---CcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCC
Confidence 458899999999999999999 999999999999873 222 346778999999999988 9999999987654332
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-------------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
.. . ..+++-||++||.+++|+|+.+|+..++..+- -++.+|.++|.|+||+|+|+||++++.
T Consensus 100 ~~---~--~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~ 174 (187)
T KOG0034|consen 100 AS---K--REKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVE 174 (187)
T ss_pred cc---H--HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 22 1 24788999999999999999999998775432 167899999999999999999999998
Q ss_pred hc
Q 008127 556 TA 557 (577)
Q Consensus 556 ~~ 557 (577)
+.
T Consensus 175 ~~ 176 (187)
T KOG0034|consen 175 KQ 176 (187)
T ss_pred cC
Confidence 75
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.5e-17 Score=168.47 Aligned_cols=259 Identities=26% Similarity=0.318 Sum_probs=198.9
Q ss_pred ccccceeeeeeecc--cCCeEEEEEEE--cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 93 DFDRRYTIGKLLGH--GQFGYTYVATD--KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 93 ~~~~~y~~~~~lG~--G~fg~V~~~~~--~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
.+...+.+...+|. |.+|.||.+.. ..++..+|+|.-... ...+.....-.+|+.....+..|++.++.+..++.
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p-~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIP-FSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCC-CCCccccccccchhhcccccCccccccccCccccc
Confidence 35567888999999 99999999998 889999999973211 11122333345677777777789999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHH----HHHHHHhcCceeccCCCCc
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLR----VAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~----~l~~LH~~~iiHrDlKp~N 244 (577)
.+..|+-+|+| +.+|..+... ....++...++.++.+... ||.++|+.+++|-|+||+|
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~----------------~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~ 252 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHT----------------PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPAN 252 (524)
T ss_pred CCcceeeeccc-cchhHHhhhc----------------ccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhh
Confidence 99999999999 5677664432 2355788889999999999 9999999999999999999
Q ss_pred EEeecCCCC-CCeeEEecCCCcccCCCCCc------cccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCC
Q 008127 245 FLFKSAKED-SSLKATDFGLSDFIKPGKKF------QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWD 317 (577)
Q Consensus 245 ILl~~~~~~-~~vkl~DFGla~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~ 317 (577)
|+... + ..++++|||+...+.+.... ....|...|++||++.+-++...||+|+|.++.+-.++..++..
T Consensus 253 i~~~~---~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~ 329 (524)
T KOG0601|consen 253 IFTTS---DWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSV 329 (524)
T ss_pred eeccc---ccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccC
Confidence 99984 4 78999999999877655421 22357888999999999999999999999999999998777643
Q ss_pred CChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 318 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 318 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.-...+.. + .... .+...+...+.++...+..|+..+|..|+++..++.|+++..
T Consensus 330 g~~~~W~~-~-r~~~-ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 330 GKNSSWSQ-L-RQGY-IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred CCCCCccc-c-cccc-CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 31111110 0 0000 112222345667777999999999999999999999999874
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.5e-17 Score=179.06 Aligned_cols=260 Identities=24% Similarity=0.373 Sum_probs=202.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.+.+.+.+-.|++|.++.+.-..+|...++|.............+....+-.++-.. .+|-++...-.+......++|
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p-~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITP-RSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccC-CCCceecccCCCCCCCCcchh
Confidence 3577778999999999999987778877777766554433333344455554444323 367777665555667789999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
++|+.+++|...|... ...++..++.+...+..+++|||...++|||++|.|+|.. .+++
T Consensus 883 ~~~~~~~~~~Skl~~~-----------------~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~---~~gh 942 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNS-----------------GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA---YDGH 942 (1205)
T ss_pred hHHhccCCchhhhhcC-----------------CCcccccccchhHHHHhhhhccccchhhcccccccchhhc---ccCC
Confidence 9999999998766432 4567777888899999999999999999999999999987 5899
Q ss_pred eeEEecCCCcccC------CC--------------------------CCccccccCCccccchhcccC-CCCCCchhhHH
Q 008127 256 LKATDFGLSDFIK------PG--------------------------KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIG 302 (577)
Q Consensus 256 vkl~DFGla~~~~------~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG 302 (577)
.+++|||...... .. .......||+.|.+||.+.+. .+..+|+|++|
T Consensus 943 ~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g 1022 (1205)
T KOG0606|consen 943 RPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSG 1022 (1205)
T ss_pred cccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhh
Confidence 9999998432210 00 011235799999999987654 58899999999
Q ss_pred HHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHH---HHhcCccccccC
Q 008127 303 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREGG 377 (577)
Q Consensus 303 ~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~---~il~hp~f~~~~ 377 (577)
+++++.++|.+||...+.+.++++++.....++.-+ ...+.++++++.++|..+|.+|..+. ++-.||||+...
T Consensus 1023 ~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1023 VCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred hhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCCC
Confidence 999999999999999999999999988766544332 34678899999999999999999988 889999999764
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-15 Score=147.04 Aligned_cols=139 Identities=17% Similarity=0.264 Sum_probs=101.8
Q ss_pred eeeec-ccCCeEEEEEEEcCCCCEEEEEEeccccc----------CchhhHHHHHHHHHHHHHhcCCCCe--eEEEEEEE
Q 008127 101 GKLLG-HGQFGYTYVATDKANGDRVAVKKIEKNKM----------ILPIAVEDVKREVKILQALAGHENV--VKFYNAFE 167 (577)
Q Consensus 101 ~~~lG-~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----------~~~~~~~~~~~E~~~l~~l~~hpni--v~~~~~~~ 167 (577)
...|| .|+.|+||.+.. .+..+|||.+..... ........+.+|+.++..|. |++| +..+++..
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~ 112 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARV 112 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeee
Confidence 34687 889999999864 477899998754221 01123456788999999995 7775 66666543
Q ss_pred c-CCe---EEEEEeccCC-CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCC
Q 008127 168 D-DNY---VYIAMELCEG-GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 242 (577)
Q Consensus 168 ~-~~~---~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp 242 (577)
. .+. .++|||+++| .+|.+.+. ...+++. .+.+|+.+|.+||++||+||||||
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~------------------~~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp 170 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALLQ------------------EAPLSEE----QWQAIGQLIARFHDAGVYHADLNA 170 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHHh------------------cCCCCHH----HHHHHHHHHHHHHHCCCCCCCCCc
Confidence 3 222 3599999997 57766542 1334443 357899999999999999999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCccc
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~ 267 (577)
+|||++. ++.++|+|||.+...
T Consensus 171 ~NILv~~---~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 171 HNILLDP---DGKFWLIDFDRGELR 192 (239)
T ss_pred hhEEEcC---CCCEEEEECCCcccC
Confidence 9999984 568999999998764
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-15 Score=136.85 Aligned_cols=134 Identities=28% Similarity=0.343 Sum_probs=110.1
Q ss_pred eeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCC-CCeeEEEEEEEcCCeEEEEEec
Q 008127 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-ENVVKFYNAFEDDNYVYIAMEL 178 (577)
Q Consensus 100 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-pniv~~~~~~~~~~~~~lv~e~ 178 (577)
+++.||.|.++.||++... +..+++|.+..... ...+.+|+.+++.+.++ +++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 4577999999999999864 37899998755431 45688999999999744 6899999988888889999999
Q ss_pred cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc---CceeccCCCCcEEeecCCCCCC
Q 008127 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 179 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~---~iiHrDlKp~NILl~~~~~~~~ 255 (577)
++|+.+.. ++......++.+++.+|.++|.. +++|+||+|+||+++. .+.
T Consensus 75 ~~g~~~~~------------------------~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~---~~~ 127 (155)
T cd05120 75 IEGETLDE------------------------VSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD---GKI 127 (155)
T ss_pred cCCeeccc------------------------CCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC---CcE
Confidence 98877643 14455667889999999999985 7999999999999983 678
Q ss_pred eeEEecCCCccc
Q 008127 256 LKATDFGLSDFI 267 (577)
Q Consensus 256 vkl~DFGla~~~ 267 (577)
++++|||.+...
T Consensus 128 ~~l~Df~~~~~~ 139 (155)
T cd05120 128 LGIIDWEYAGYG 139 (155)
T ss_pred EEEEecccccCC
Confidence 999999998754
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.4e-16 Score=139.74 Aligned_cols=139 Identities=27% Similarity=0.409 Sum_probs=114.8
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
+.|+..++..+.+-|.. ....|.++.++|+.+++..++..-+...++.+|+.+|.|+||.|+|.||+.++........
T Consensus 21 t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~ 98 (193)
T KOG0044|consen 21 TKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTL 98 (193)
T ss_pred cCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcH
Confidence 56778888888888876 5679999999999999887777777888999999999999999999999987765433222
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc----C-------------cHHHHHHHhCCCCCCcccHHHHHHH
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G-------------SIDPLLEEADIDKDGRISLSEFRRL 553 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~-------------~~~~~~~~~D~d~dG~i~~~EF~~~ 553 (577)
.++++-+|++||.||+|+|+.+|+-.++... + -++.+|+.+|.|+||.|+++||+..
T Consensus 99 ------eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~ 172 (193)
T KOG0044|consen 99 ------EEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEG 172 (193)
T ss_pred ------HHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHH
Confidence 2356678999999999999999998765432 1 1788999999999999999999998
Q ss_pred Hhhc
Q 008127 554 LRTA 557 (577)
Q Consensus 554 l~~~ 557 (577)
....
T Consensus 173 ~~~d 176 (193)
T KOG0044|consen 173 CKAD 176 (193)
T ss_pred hhhC
Confidence 8754
|
|
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-15 Score=134.30 Aligned_cols=126 Identities=25% Similarity=0.361 Sum_probs=111.3
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
..+...|...|+|+.|.|+.+||..+|...-...++.+.+..|+..+|.+.+|+|+|.||..+|..+.
T Consensus 57 ~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~------------ 124 (221)
T KOG0037|consen 57 PQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN------------ 124 (221)
T ss_pred HHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH------------
Confidence 46788899999999999999999999964445678889999999999999999999999998886543
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCc------HHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~------~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..+.+|+.||+|++|.|+..||+.+|..+|- .+-+++.+|.-++|.|.|++|+..+-.
T Consensus 125 ~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~ 188 (221)
T KOG0037|consen 125 QWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVV 188 (221)
T ss_pred HHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHH
Confidence 4566999999999999999999999999992 788899999888999999999987754
|
|
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.8e-14 Score=133.22 Aligned_cols=135 Identities=30% Similarity=0.413 Sum_probs=108.0
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
.+-++.|+.-|.|+||.++.+||..+|+..-...+.+.-|..-+..+|+|+||+|+++||+.-+..... +.+.++|..
T Consensus 163 ~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~--~~~epeWv~ 240 (325)
T KOG4223|consen 163 ARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEG--NEEEPEWVL 240 (325)
T ss_pred HHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccC--CCCCccccc
Confidence 445667999999999999999999999654344556677888899999999999999999987765433 233445543
Q ss_pred HHH-HHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 499 RSQ-AAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 499 ~~~-~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
.-+ ..|...|+|+||+++.+|++.++...+ ++..++-+.|.|+||++|++|.+.-.-
T Consensus 241 ~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~~d 304 (325)
T KOG4223|consen 241 TEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILEHYD 304 (325)
T ss_pred ccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhhCcc
Confidence 333 456677999999999999998887665 588899999999999999999886543
|
|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-13 Score=133.13 Aligned_cols=133 Identities=29% Similarity=0.427 Sum_probs=113.9
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccc
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 492 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~ 492 (577)
.++...+++.+|+.||.+++|.++..++.+.+.. ++. ++...-+..+|+.+|.|.||.+||.||...+. +.
T Consensus 9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~-l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~------~~- 80 (463)
T KOG0036|consen 9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEK-LDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD------NK- 80 (463)
T ss_pred cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHh-cCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH------Hh-
Confidence 4455568999999999999999999999999865 544 47777889999999999999999999986442 22
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
+.++..+|+.+|.++||.|+.+|+...+..+| ++..+|+.+|.++++.|+++||.+.+.-..
T Consensus 81 ----E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p 148 (463)
T KOG0036|consen 81 ----ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYP 148 (463)
T ss_pred ----HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCC
Confidence 23677899999999999999999999998887 378899999999999999999999886544
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.1e-13 Score=140.01 Aligned_cols=144 Identities=20% Similarity=0.270 Sum_probs=94.6
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc---------------------------hhh----HH------HH
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---------------------------PIA----VE------DV 143 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~---------------------------~~~----~~------~~ 143 (577)
.+.||.|++|+||+|+. .+|+.||||+....-... ... .. .+
T Consensus 122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 35799999999999985 489999999875431000 000 00 23
Q ss_pred HHHHHHHHHhc----CCCCeeEEEEEE-EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHH
Q 008127 144 KREVKILQALA----GHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218 (577)
Q Consensus 144 ~~E~~~l~~l~----~hpniv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 218 (577)
.+|...+.++. ++|++. +-.+| ...+..+|||||++|++|.+..... . .... ...
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~-vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~---------------~-~~~~---~~~ 260 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVY-VPEVYWDRTSERVLTMEWIDGIPLSDIAALD---------------E-AGLD---RKA 260 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEE-eCCEehhhcCCceEEEEeECCcccccHHHHH---------------h-cCCC---HHH
Confidence 44555454443 344432 22222 2344578999999999998754321 0 1111 234
Q ss_pred HHHHHHH-HHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccC
Q 008127 219 VVRQMLR-VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268 (577)
Q Consensus 219 i~~qil~-~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~ 268 (577)
++..++. .+..+|..|++|+|++|.||+++ .++.++|+|||++..+.
T Consensus 261 ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~---~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 261 LAENLARSFLNQVLRDGFFHADLHPGNIFVL---KDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHHHHHHHhCCceeCCCCcccEEEC---CCCcEEEEeCCCeeECC
Confidence 5555555 46788999999999999999997 46889999999987653
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-12 Score=119.57 Aligned_cols=141 Identities=15% Similarity=0.117 Sum_probs=100.3
Q ss_pred eeecccCCeEEEEEEEcC------CCCEEEEEEeccccc-------------------CchhhHHH----HHHHHHHHHH
Q 008127 102 KLLGHGQFGYTYVATDKA------NGDRVAVKKIEKNKM-------------------ILPIAVED----VKREVKILQA 152 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~------~~~~vaiK~i~~~~~-------------------~~~~~~~~----~~~E~~~l~~ 152 (577)
..||.|.-+.||.|.... .+..+|||+...... ........ ..+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999997543 357999997632100 00111222 3489999999
Q ss_pred hcCC-CCeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH-
Q 008127 153 LAGH-ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC- 230 (577)
Q Consensus 153 l~~h-pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~L- 230 (577)
+... -++++.+++ ..-+|||||+.++.+..... +...+++..+..++.+++.+|..|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L-----------------kd~~~~~~~~~~i~~~i~~~l~~l~ 141 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL-----------------KDAKLNDEEMKNAYYQVLSMMKQLY 141 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh-----------------hccccCHHHHHHHHHHHHHHHHHHH
Confidence 8633 466666654 34689999997654422111 123455666778889999999999
Q ss_pred HhcCceeccCCCCcEEeecCCCCCCeeEEecCCCccc
Q 008127 231 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 231 H~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~ 267 (577)
|..||||+||+|.|||+. ++.+.|+|||.|...
T Consensus 142 H~~glVHGDLs~~NIL~~----~~~v~iIDF~qav~~ 174 (197)
T cd05146 142 KECNLVHADLSEYNMLWH----DGKVWFIDVSQSVEP 174 (197)
T ss_pred HhCCeecCCCCHHHEEEE----CCcEEEEECCCceeC
Confidence 899999999999999997 467999999988654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.6e-13 Score=127.84 Aligned_cols=140 Identities=27% Similarity=0.356 Sum_probs=110.0
Q ss_pred HHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh-------
Q 008127 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL------- 488 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~------- 488 (577)
+...++..+|..+|.++||.|+..||..++.... ......++.+-+..+|.|+||.|+|+||...+......
T Consensus 74 e~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~-k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~ 152 (325)
T KOG4223|consen 74 ESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQ-KKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDE 152 (325)
T ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHH-HHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccc
Confidence 4567899999999999999999999999986533 23334677778899999999999999999877642110
Q ss_pred cc-cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 489 EE-HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 489 ~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.. .........-++-|++-|.|+||.++.+||-.+|.... -|.+.+..+|+||||+|+++||+.-|..
T Consensus 153 e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~ 228 (325)
T KOG4223|consen 153 EDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYS 228 (325)
T ss_pred hhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhh
Confidence 00 11111223446689999999999999999999997654 2889999999999999999999977754
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.3e-13 Score=145.95 Aligned_cols=151 Identities=21% Similarity=0.242 Sum_probs=95.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc--------------------------Cc-h----hhHHHH--
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--------------------------IL-P----IAVEDV-- 143 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--------------------------~~-~----~~~~~~-- 143 (577)
.|.. +.||.|++|+||+|+.+.+|+.||||++...-. .. . ...+.+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4665 789999999999999887899999999865310 00 0 111223
Q ss_pred ----HHHHHHHHHhc---CCCCeeEEEEEEE-cCCeEEEEEeccCCCchhHHHH--HHhhhhhhhhhHHHhhhcCCCCCH
Q 008127 144 ----KREVKILQALA---GHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRIL--AKMISTTLTSAWFLAIRKDSRYTE 213 (577)
Q Consensus 144 ----~~E~~~l~~l~---~hpniv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~ 213 (577)
.+|+..+.++. .+...+.+-.+|. .....+|||||+.|+.+.+.-. .... ....+.+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~-------------d~~~la~ 266 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGT-------------DMKLLAE 266 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCC-------------CHHHHHH
Confidence 33443333332 1333343334333 2456789999999999976321 1100 0012444
Q ss_pred HHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC-CCCCeeEEecCCCcccC
Q 008127 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLSDFIK 268 (577)
Q Consensus 214 ~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~-~~~~vkl~DFGla~~~~ 268 (577)
..+..++.|++ ..|++|+|+||.||+++..+ .++.++++|||++..+.
T Consensus 267 ~~v~~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 267 RGVEVFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHHHHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 44555555654 58999999999999998421 12489999999987664
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.5e-12 Score=119.22 Aligned_cols=129 Identities=19% Similarity=0.207 Sum_probs=95.2
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEeccC
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~ 180 (577)
++.|+.|.++.||++.. .+..|++|....... ....+.+|+.+++.+.+...+++++.... ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 45789999999999975 377899998754321 12346789999998863333455555443 23479999999
Q ss_pred CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCc-----eeccCCCCcEEeecCCCCCC
Q 008127 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL-----VHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 181 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~i-----iHrDlKp~NILl~~~~~~~~ 255 (577)
|.++.+. ......++.+++.+|..||..++ +|+|++|.||+++ ++.
T Consensus 75 G~~l~~~-------------------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~ 125 (170)
T cd05151 75 GSELLTE-------------------------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGR 125 (170)
T ss_pred CCccccc-------------------------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCe
Confidence 9877531 00113456799999999999885 9999999999997 356
Q ss_pred eeEEecCCCcc
Q 008127 256 LKATDFGLSDF 266 (577)
Q Consensus 256 vkl~DFGla~~ 266 (577)
++++|||.+..
T Consensus 126 ~~liDf~~a~~ 136 (170)
T cd05151 126 LWLIDWEYAGM 136 (170)
T ss_pred EEEEecccccC
Confidence 99999998864
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.7e-13 Score=141.42 Aligned_cols=251 Identities=18% Similarity=0.167 Sum_probs=182.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEc-CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK-ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
..+|..+..||.|.|+.|+.+..+ .++..|++|.+...... ......-..|+-+...+..|.+++.++..|......|
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~-~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLAT-FASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccc-hHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 346888999999999999998755 67889999987654322 2222333567777777767999999998888888888
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
|--|||.++++...+.- ...+.+...+.+..|++.++.++|+..++|+|+||+||++... .
T Consensus 343 ip~e~~~~~s~~l~~~~-----------------~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~--~ 403 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVT-----------------SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND--G 403 (524)
T ss_pred CchhhhcCcchhhhhHH-----------------HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc--h
Confidence 99999999987654421 1446778889999999999999999999999999999999842 2
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccc-cchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYV-APEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~-aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
+..++.|||.+..+.- ......++-++. .+|++... +..+.|++|||..+.+.++|...-+.... ...+..+
T Consensus 404 ~~~~~~~~~~~t~~~~--~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~ 478 (524)
T KOG0601|consen 404 FFSKLGDFGCWTRLAF--SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSG 478 (524)
T ss_pred hhhhccccccccccce--ecccccccccccccchhhccccccccccccccccccccccccCcccCccccc---ceeeecc
Confidence 8899999998864211 111223334445 35555443 37899999999999999998665322211 1122222
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
.. ...+.....+..+.+.++..++..||.+.++..|+=|-
T Consensus 479 ~~----p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 479 DT----PNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred cc----cCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 11 11234457788999999999999999999988876553
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.1e-14 Score=132.90 Aligned_cols=240 Identities=17% Similarity=0.199 Sum_probs=154.1
Q ss_pred EEEEEEEcCCCCEEEEEEecccccCchhh-HHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----eEEEEEeccCCCch
Q 008127 111 YTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKILQALAGHENVVKFYNAFEDDN-----YVYIAMELCEGGEL 184 (577)
Q Consensus 111 ~V~~~~~~~~~~~vaiK~i~~~~~~~~~~-~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-----~~~lv~e~~~~g~L 184 (577)
.||++.+...|..|+.-.+.......+.. -+....-..-|-++ .|.|||++..||.+.. ...++.||++.|++
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllql-vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~ 159 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQL-VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSL 159 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHH-HHHHHHHHHHhhcccccccccceEEEEecccchhH
Confidence 46667666677666544332211111111 11122223334456 4999999999987543 47889999999999
Q ss_pred hHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--CceeccCCCCcEEeecCCCCCCeeEEecC
Q 008127 185 LDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFG 262 (577)
Q Consensus 185 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~--~iiHrDlKp~NILl~~~~~~~~vkl~DFG 262 (577)
..+|.+- ......+......+|+.||+.||.|||+. -|+|+++..+-|++. .++.||+.---
T Consensus 160 ~~fLkrt-------------~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq---~ngLIkig~~a 223 (458)
T KOG1266|consen 160 KQFLKRT-------------KKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ---HNGLIKIGSVA 223 (458)
T ss_pred HHHHHHH-------------HHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec---CCceEEecccC
Confidence 9988643 22346678888899999999999999997 599999999999998 47777764211
Q ss_pred CCcccCCC----C--CccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCC-CCCChhHHHHHHHhCCCCC
Q 008127 263 LSDFIKPG----K--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 263 la~~~~~~----~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf-~~~~~~~~~~~i~~~~~~~ 334 (577)
.. ...+. . ....-.|-++|.|||.=. .+.+.++|||++|+...+|..+..-- .+.+.-+.-..+..-....
T Consensus 224 p~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~l 302 (458)
T KOG1266|consen 224 PD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGL 302 (458)
T ss_pred cc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeec
Confidence 11 11110 0 011224678899998632 33467899999999999999886642 2222111111111111000
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
. ...-++++.+||+..|..||++.+++.||..=+
T Consensus 303 e-------n~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe 336 (458)
T KOG1266|consen 303 E-------NGLQRGSITKCLEGEPNGRPDARLLLFHPLLFE 336 (458)
T ss_pred c-------CccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence 0 011246889999999999999999999998654
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.8e-11 Score=126.24 Aligned_cols=182 Identities=19% Similarity=0.258 Sum_probs=131.3
Q ss_pred eeeeeeecccCCeEEE-EEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 98 YTIGKLLGHGQFGYTY-VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~-~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
|.+ ...+-++.+ || .|..+.++.+|.|..+..+.- ...+...+-+.-|+.|+ ||||+++++.++.++.+|||+
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlR-HP~Il~yL~t~e~~~~~ylvT 88 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLR-HPNILSYLDTTEEEGTLYLVT 88 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhcc-CchhhhhhhhhcccCceEEEe
Confidence 555 333444444 44 466678899999988765532 23455677788899996 999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH-hcCceeccCCCCcEEeecCCCCCC
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH-~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|-+. .|..++.. ++...+...+.||+.||.||| ..+++|++|..+.|+++ ..|.
T Consensus 89 ErV~--Pl~~~lk~--------------------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn---~~Ge 143 (690)
T KOG1243|consen 89 ERVR--PLETVLKE--------------------LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVN---ESGE 143 (690)
T ss_pred eccc--cHHHHHHH--------------------hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEc---CCCc
Confidence 9884 44444432 346677888999999999998 57899999999999998 5889
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhC
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 311 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg 311 (577)
.||++|-++........ .....---.|..|+.+... .-..|.|-|||++++++.|
T Consensus 144 WkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s-~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 144 WKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS-EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred EEEeeeEEEeccccCCcccccchhhhcccChhhcCcc-ccchhhhhHHHHHHHHhCc
Confidence 99999988754432211 1111111235566543222 1346999999999999999
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.8e-11 Score=104.42 Aligned_cols=150 Identities=21% Similarity=0.272 Sum_probs=109.5
Q ss_pred eeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch-----hhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 100 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+..|-+|+-+.|+.+. ..|+.++||.-.......| .......+|+++|.++. --.|.--.-++.+...-.|
T Consensus 11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeE
Confidence 45678899999999996 5688888886433333333 23456788999998875 3344333334566666788
Q ss_pred EEeccCC-CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 175 AMELCEG-GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 175 v~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|||++| -++.+++...+ .......-...++..|-+.+.-||.++|||+||..+||++.+.+.+
T Consensus 88 ~ME~~~g~~~vk~~i~~~~---------------~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~ 152 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTM---------------EDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQ 152 (229)
T ss_pred EEEeccchhHHHHHHHHHc---------------cCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCc
Confidence 9999987 35666665432 1233334447889999999999999999999999999999987777
Q ss_pred CCeeEEecCCCccc
Q 008127 254 SSLKATDFGLSDFI 267 (577)
Q Consensus 254 ~~vkl~DFGla~~~ 267 (577)
..+.|+|||++...
T Consensus 153 ~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 153 ITPILIDFGLSSVS 166 (229)
T ss_pred CceEEEeecchhcc
Confidence 77899999998653
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.7e-10 Score=113.02 Aligned_cols=226 Identities=17% Similarity=0.212 Sum_probs=158.4
Q ss_pred CeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE----cCCeEEEEEeccCC-Cc
Q 008127 109 FGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE----DDNYVYIAMELCEG-GE 183 (577)
Q Consensus 109 fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~----~~~~~~lv~e~~~~-g~ 183 (577)
-.+.|++....+|..|++|++...+...+ .....-+++++++. |+|+|++.++|. .+..+++|++|+|+ ++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~-h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLC-HTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhc-cCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 45689999999999999999954332211 12334567889995 999999999887 35679999999986 57
Q ss_pred hhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCC
Q 008127 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263 (577)
Q Consensus 184 L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGl 263 (577)
|.+......... ....-.+...+...++..+|.++.|+..||.++|+.|+.-+=|.|.+||++. +..|+|.-.|.
T Consensus 365 L~d~~F~~~~~t--~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G---~~RIriS~C~i 439 (655)
T KOG3741|consen 365 LYDLYFANPPFT--KRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTG---KMRIRISGCGI 439 (655)
T ss_pred HHHHHccCCccc--cccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeC---cceEEEecccc
Confidence 777654332111 0011123345677899999999999999999999999999999999999983 44788888887
Q ss_pred CcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHH-HHHHHhCCCCCCCCCCCC
Q 008127 264 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGI-FKEVLRNKPDFRRKPWPS 341 (577)
Q Consensus 264 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~-~~~i~~~~~~~~~~~~~~ 341 (577)
...+..... |-+.+ -.+-|.=.||.+++.|.||..-=+..+. .+. +..|. +.
T Consensus 440 ~Dvl~~d~~-------------~~le~--~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~-----------~~ 493 (655)
T KOG3741|consen 440 MDVLQEDPT-------------EPLES--QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT-----------TT 493 (655)
T ss_pred eeeecCCCC-------------cchhH--HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh-----------hh
Confidence 665543320 11111 2346888999999999999665322221 111 11121 34
Q ss_pred CCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 342 ISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 342 ~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+|.+++++|..+...++.+ -++.+++.+
T Consensus 494 yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 494 YSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred hhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 6788999999998888886 577777654
|
|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.9e-11 Score=110.79 Aligned_cols=118 Identities=25% Similarity=0.248 Sum_probs=94.3
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc-----
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH----- 491 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~----- 491 (577)
...-...+|+.||.|+||.|+..||..+|.. +-....++.+...|+.+|.|++|.|+.+|++.++..+..+...
T Consensus 62 ~~~y~~~vF~~fD~~~dg~i~F~Efi~als~-~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~ 140 (193)
T KOG0044|consen 62 ASKYAELVFRTFDKNKDGTIDFLEFICALSL-TSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPE 140 (193)
T ss_pred HHHHHHHHHHHhcccCCCCcCHHHHHHHHHH-HcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCc
Confidence 3456678899999999999999999999844 4455567888999999999999999999999988766655432
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHH
Q 008127 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE 535 (577)
Q Consensus 492 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~ 535 (577)
........+.++|+.+|.|+||.||.+||.........+-.++.
T Consensus 141 ~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~i~~~l~ 184 (193)
T KOG0044|consen 141 DEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPSILRALE 184 (193)
T ss_pred ccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHHHHHHhh
Confidence 12223456788999999999999999999988876655555554
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.1e-11 Score=130.11 Aligned_cols=104 Identities=21% Similarity=0.308 Sum_probs=87.8
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCC-CCccHHH---HHHHHHhhcCCCCcceehhhHHHHHhhhhh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESR---VLEILQAIDCNTDGLVDFSEFVAATLHVHQ 487 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~-~~~~~~~---~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~ 487 (577)
.|...++++++++|+.+|.|+||+| +..++ +.+| ..+++.+ ++.+|+.+|.|++|.|+|+||+.++....
T Consensus 136 ~f~~kqi~elkeaF~lfD~dgdG~i----Lg~il-rslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg- 209 (644)
T PLN02964 136 DFVTQEPESACESFDLLDPSSSNKV----VGSIF-VSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFG- 209 (644)
T ss_pred hccHHHHHHHHHHHHHHCCCCCCcC----HHHHH-HHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhc-
Confidence 4566788999999999999999997 77777 5688 5888887 89999999999999999999998876432
Q ss_pred hcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcC
Q 008127 488 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL 526 (577)
Q Consensus 488 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 526 (577)
.... .++++.+|+.||+|++|+|+.+||+.++..
T Consensus 210 --~~~s---eEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 210 --NLVA---ANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred --cCCC---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 1122 236888999999999999999999998876
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.9e-10 Score=102.29 Aligned_cols=135 Identities=25% Similarity=0.317 Sum_probs=96.6
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchh-----hHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI-----AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~-----~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
..+++|+-+.+|.+.. -|..+++|.=.+.....+. ......+|..++.++. --.|..-+-+..+.....|+|
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEE
Confidence 3588999999999954 3556777753332222222 3445678999998885 334433333445566678999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||++|..|.+.+... ...++..+-.-+.-||..||||+||.++||++. ++.+
T Consensus 79 e~I~G~~lkd~l~~~------------------------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i 130 (204)
T COG3642 79 EYIEGELLKDALEEA------------------------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRI 130 (204)
T ss_pred EEeCChhHHHHHHhc------------------------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcE
Confidence 999887777666321 245677788888899999999999999999997 4559
Q ss_pred eEEecCCCccc
Q 008127 257 KATDFGLSDFI 267 (577)
Q Consensus 257 kl~DFGla~~~ 267 (577)
.++||||+...
T Consensus 131 ~~IDfGLg~~s 141 (204)
T COG3642 131 YFIDFGLGEFS 141 (204)
T ss_pred EEEECCccccc
Confidence 99999999754
|
|
| >KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.4e-11 Score=100.96 Aligned_cols=95 Identities=24% Similarity=0.433 Sum_probs=78.6
Q ss_pred HHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC--------
Q 008127 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------- 528 (577)
Q Consensus 457 ~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------- 528 (577)
.-++|...+..||.|.++|++|+.++.....+.+. ..++..||+.||-|+|++|..++|...+..+.
T Consensus 72 fk~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APr-----dlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eE 146 (189)
T KOG0038|consen 72 FKRRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPR-----DLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEE 146 (189)
T ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHHHHhhChH-----HhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHH
Confidence 34566677788999999999999987765544332 34778899999999999999999998876553
Q ss_pred ---cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 529 ---SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 529 ---~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.++.+++++|.||||+++|.||..++.+
T Consensus 147 v~~i~ekvieEAD~DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 147 VELICEKVIEEADLDGDGKLSFAEFEHVILR 177 (189)
T ss_pred HHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence 2788999999999999999999988865
|
|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.12 E-value=7e-11 Score=93.95 Aligned_cols=69 Identities=25% Similarity=0.408 Sum_probs=62.0
Q ss_pred HHHhhhccccccccC-CCCCCCCHHHHHHHHHhhCCCCccH-HHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAIDV-DKNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~-d~dG~i~~~el~~~l~~~~~~~~~~-~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..+..|..+|+.||. +++|+|+..||+.+|...+|...++ .+++.||+.+|.|+||.|+|+||+.++..
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 456789999999999 9999999999999996558877777 89999999999999999999999987654
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.6e-11 Score=89.02 Aligned_cols=55 Identities=47% Similarity=0.733 Sum_probs=49.9
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcCcC----------cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
++++|+.+|+|++|+|+.+||+.++...+ .+..+|+.+|+|+||.|+|+||+.+|
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 67799999999999999999999988776 26677999999999999999999876
|
... |
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.7e-09 Score=106.98 Aligned_cols=246 Identities=19% Similarity=0.198 Sum_probs=158.2
Q ss_pred eeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEE-----E-Ec-CCe
Q 008127 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNA-----F-ED-DNY 171 (577)
Q Consensus 99 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~-----~-~~-~~~ 171 (577)
..++.||+|+-+.+|-.-.- + ..+.|++..... ..... .+..|-..-.||-+-.-+.+ + .. ...
T Consensus 14 ~~gr~LgqGgea~ly~l~e~--~-d~VAKIYh~Ppp---a~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV--R-DQVAKIYHAPPP---AAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCCccccCCccceeeecchh--h-chhheeecCCCc---hHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 35678999999999977322 2 234587765532 12222 22334444456644331111 0 11 223
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+.++|..++|..=-..+..- ...-+........-+.+++..|+.+...||..|.+-+|++++|+|++
T Consensus 85 iGflmP~v~g~~pI~~~y~p----------~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs--- 151 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSP----------ATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS--- 151 (637)
T ss_pred eEEecccCCCccchhhhcCc----------hhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee---
Confidence 67888888775322212110 01111223466778899999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcc-----cC-CCCCCchhhHHHHHHHHHhC-CCCCCCC----Ch
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-----RK-SGPESDVWSIGVITYILLCG-RRPFWDK----TE 320 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-----~~-~~~~~DiwSlG~il~el~tg-~~Pf~~~----~~ 320 (577)
+++.|.|+|-..-.....+..+...+|.+.|.+||.-+ +. -....|.|.||+++++++.| ++||.+- ..
T Consensus 152 d~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~a 231 (637)
T COG4248 152 DDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDA 231 (637)
T ss_pred cCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCC
Confidence 57889999866555444555566678999999999754 22 25678999999999999986 9999652 11
Q ss_pred hHHHH-HHHhC------------CCCCCCCCCCCCCHHHHHHHHHcccc--CcCCCCCHHH
Q 008127 321 DGIFK-EVLRN------------KPDFRRKPWPSISNSAKDFVKKLLVK--DPRARLTAAQ 366 (577)
Q Consensus 321 ~~~~~-~i~~~------------~~~~~~~~~~~~s~~~~~li~~~l~~--dP~~Rpt~~~ 366 (577)
...++ .|..+ .+.....+|.-+++.++.|..+|+.. ++.-|||++.
T Consensus 232 p~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 232 PNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred CCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 11122 22211 11122234566889999999999984 3558998764
|
|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.6e-10 Score=91.97 Aligned_cols=62 Identities=16% Similarity=0.269 Sum_probs=55.3
Q ss_pred HHHHHHHHhhcCC-CCCCcccHHHHhhhhcC-cC-------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 497 HLRSQAAFEKFDI-DRDGFITPEELRMHTGL-KG-------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 497 ~~~~~~~F~~~D~-d~~G~I~~~El~~~l~~-~~-------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
...++.+|+.||+ +++|+|+.+||+.++.. ++ +++++|+.+|.|+||+|+|+||+.+|.+..
T Consensus 7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 3468889999999 99999999999999877 54 389999999999999999999999997643
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2e-10 Score=103.40 Aligned_cols=92 Identities=27% Similarity=0.462 Sum_probs=80.1
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHH
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 496 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~ 496 (577)
-++.++.+|..+|+|+.|.|+..||+.+|. .+|+.++++.++.|++.+|.-++|.|+|++|+..+....
T Consensus 122 ~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~-~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~---------- 190 (221)
T KOG0037|consen 122 YINQWRNVFRTYDRDRSGTIDSSELRQALT-QLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQ---------- 190 (221)
T ss_pred HHHHHHHHHHhcccCCCCcccHHHHHHHHH-HcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHH----------
Confidence 467899999999999999999999999995 599999999999999999988899999999998775432
Q ss_pred HHHHHHHHhhcCCCCCCccc--HHHHh
Q 008127 497 HLRSQAAFEKFDIDRDGFIT--PEELR 521 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~--~~El~ 521 (577)
.+.++|+.+|++.+|.|+ .++|.
T Consensus 191 --~lt~~Fr~~D~~q~G~i~~~y~dfl 215 (221)
T KOG0037|consen 191 --RLTEAFRRRDTAQQGSITISYDDFL 215 (221)
T ss_pred --HHHHHHHHhccccceeEEEeHHHHH
Confidence 455699999999999875 34544
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.8e-10 Score=106.22 Aligned_cols=84 Identities=32% Similarity=0.474 Sum_probs=61.4
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcC-CCCeeEEEEEEEcC---CeEEEEEe
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG-HENVVKFYNAFEDD---NYVYIAME 177 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~-hpniv~~~~~~~~~---~~~~lv~e 177 (577)
+.||.|..+.||++... +|+.+++|........ .....+.+|+.+++.+.. +..+++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 56899999999999753 3689999987654321 134567899999999963 23467777766653 36789999
Q ss_pred ccCCCchhHHH
Q 008127 178 LCEGGELLDRI 188 (577)
Q Consensus 178 ~~~~g~L~~~l 188 (577)
|++|.++.+.+
T Consensus 81 ~i~G~~l~~~~ 91 (223)
T cd05154 81 RVDGRVLRDRL 91 (223)
T ss_pred EeCCEecCCCC
Confidence 99998876543
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-10 Score=87.96 Aligned_cols=62 Identities=32% Similarity=0.575 Sum_probs=52.5
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCcc----HHHHHHHHHhhcCCCCcceehhhHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK----ESRVLEILQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~----~~~~~~~~~~~D~d~dg~i~f~EF~~~~ 482 (577)
+|+++|+.+|+|++|+|+.+||..++.. ++.... ...++.+|+.+|.|+||.|+|+||+.++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKH-LGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH-TTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHH-hcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4788999999999999999999999954 665443 4456667999999999999999998653
|
... |
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=7.6e-10 Score=108.45 Aligned_cols=148 Identities=25% Similarity=0.305 Sum_probs=109.6
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccccc----
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS---- 493 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~---- 493 (577)
..+|...|+.+|.++.|+|+......++...+|.++.=..+..- ....+.||.|.|.+-+..+.......+...
T Consensus 463 ~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~k--la~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slve 540 (631)
T KOG0377|consen 463 RSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPK--LANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVE 540 (631)
T ss_pred hhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhh--ccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHH
Confidence 45788889999999999999999999998888877653333222 234456889999988765433222211100
Q ss_pred --HHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----------cHHHHHHHhCCCCCCcccHHHHHHHHhhcccCC
Q 008127 494 --EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDPLLEEADIDKDGRISLSEFRRLLRTASISS 561 (577)
Q Consensus 494 --~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~~~~ 561 (577)
-.....+..+|+.+|+|++|.||.+||+.+....+ ++.++-+.+|.|+||.|++.||+++++-+.-..
T Consensus 541 tLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlvdr~~ 620 (631)
T KOG0377|consen 541 TLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLVDRRR 620 (631)
T ss_pred HHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhhcchh
Confidence 01134678899999999999999999998775543 488889999999999999999999999876655
Q ss_pred CCCCCC
Q 008127 562 RNVPPS 567 (577)
Q Consensus 562 ~~~~~~ 567 (577)
+...|.
T Consensus 621 ~~~~p~ 626 (631)
T KOG0377|consen 621 STGRPS 626 (631)
T ss_pred hcCCCc
Confidence 444443
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=99.03 E-value=4e-10 Score=89.82 Aligned_cols=69 Identities=20% Similarity=0.338 Sum_probs=60.9
Q ss_pred HHHhhhcccccccc-CCCCC-CCCHHHHHHHHHh----hCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAID-VDKNG-SISLEEMRQALAK----DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~D-~d~dG-~i~~~el~~~l~~----~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..+..++++|+.|| .|+|| +|+.+||+.+|.. .+|..+++++++.+++.+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 45678999999998 89999 5999999999953 2788889999999999999999999999999976653
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.6e-10 Score=116.67 Aligned_cols=154 Identities=22% Similarity=0.290 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCcc----------ccccCCccccchhc
Q 008127 220 VRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ----------DIVGSAYYVAPEVL 288 (577)
Q Consensus 220 ~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~----------~~~gt~~y~aPE~~ 288 (577)
+.+++.|+.|+|. .++||+.|.|++|.++ .++..||+.|+++....+...+. -..-...|.|||++
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~n---a~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~ 181 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVN---ANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL 181 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheeec---cCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence 3455599999997 5899999999999998 58899999999987655422211 01234569999988
Q ss_pred ccCC-CCCCchhhHHHHHHHHH-hCCCCCCCCChhHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHH
Q 008127 289 KRKS-GPESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAA 365 (577)
Q Consensus 289 ~~~~-~~~~DiwSlG~il~el~-tg~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~ 365 (577)
.+.. +.++|++|+||++|.+. .|+..+.+......+... ........ ..-..++.++++=|.++|..++..||++.
T Consensus 182 ~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~-~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~ 260 (700)
T KOG2137|consen 182 LGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS-RNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLD 260 (700)
T ss_pred ccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh-hcccccccccccccCcHHHHHHHHHHhcCCcccCcchh
Confidence 7644 78999999999999999 455555444332222211 11111111 01146889999999999999999999999
Q ss_pred HHhcCccccccC
Q 008127 366 QALSHPWVREGG 377 (577)
Q Consensus 366 ~il~hp~f~~~~ 377 (577)
.++..|||.+..
T Consensus 261 ~l~~~~ff~D~~ 272 (700)
T KOG2137|consen 261 LLLSIPFFSDPG 272 (700)
T ss_pred hhhcccccCCch
Confidence 999999999864
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.4e-09 Score=86.75 Aligned_cols=60 Identities=20% Similarity=0.323 Sum_probs=53.9
Q ss_pred HHHHHHHhhcC-CCCCC-cccHHHHhhhhcC-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++++|+.|| +||+| +|+.+||+.+|+. .+ +++++++.+|.|+||+|+|+||+.++...
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 46788999998 89999 5999999999987 55 39999999999999999999999998754
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.5e-09 Score=88.82 Aligned_cols=73 Identities=22% Similarity=0.363 Sum_probs=64.9
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 487 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~ 487 (577)
.++++++..++++|..+|.|++|.|+.+||..+|.. .| +++.++..++..+|.+++|.|+|+||+.++.....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~-~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~ 75 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLK-SG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYR 75 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHH
Confidence 357789999999999999999999999999999954 55 67889999999999999999999999988765544
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.7e-09 Score=95.52 Aligned_cols=130 Identities=26% Similarity=0.301 Sum_probs=81.1
Q ss_pred EEEEEEEcCCCCEEEEEEecccc-----------------------cCchhhHHHHHHHHHHHHHhcCC-CCeeEEEEEE
Q 008127 111 YTYVATDKANGDRVAVKKIEKNK-----------------------MILPIAVEDVKREVKILQALAGH-ENVVKFYNAF 166 (577)
Q Consensus 111 ~V~~~~~~~~~~~vaiK~i~~~~-----------------------~~~~~~~~~~~~E~~~l~~l~~h-pniv~~~~~~ 166 (577)
.||.|.. ..|..+|||+..... .+.........+|.+.|.++... -++++.+++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888975 467799999763310 11112345678999999999633 2566766543
Q ss_pred EcCCeEEEEEeccC--CCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHH-HHhcCceeccCCCC
Q 008127 167 EDDNYVYIAMELCE--GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAE-CHLHGLVHRDMKPE 243 (577)
Q Consensus 167 ~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~-LH~~~iiHrDlKp~ 243 (577)
. -+|||||++ |..+ ..+... .++......++.+++..+.. +|..||||+||.+.
T Consensus 80 --~--~~ivME~I~~~G~~~-~~l~~~------------------~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~ 136 (188)
T PF01163_consen 80 --R--NVIVMEYIGEDGVPL-PRLKDV------------------DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEY 136 (188)
T ss_dssp --T--TEEEEE--EETTEEG-GCHHHC------------------GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STT
T ss_pred --C--CEEEEEecCCCccch-hhHHhc------------------cccchhHHHHHHHHHHHHHHHHHhcCceecCCChh
Confidence 2 369999997 4433 323221 11234456778888886655 57999999999999
Q ss_pred cEEeecCCCCCCeeEEecCCCcccC
Q 008127 244 NFLFKSAKEDSSLKATDFGLSDFIK 268 (577)
Q Consensus 244 NILl~~~~~~~~vkl~DFGla~~~~ 268 (577)
|||++ ++.+.|+|||.|....
T Consensus 137 NIlv~----~~~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 137 NILVD----DGKVYIIDFGQAVDSS 157 (188)
T ss_dssp SEEEE----TTCEEE--GTTEEETT
T ss_pred hEEee----cceEEEEecCcceecC
Confidence 99998 3489999999886543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.4e-08 Score=96.39 Aligned_cols=139 Identities=17% Similarity=0.126 Sum_probs=92.6
Q ss_pred eEEEEEEEcCCCCEEEEEEecccccC---ch-----hhHHHHHHHHHHHHHhcCCCCe--eEEEEEEEc-----CCeEEE
Q 008127 110 GYTYVATDKANGDRVAVKKIEKNKMI---LP-----IAVEDVKREVKILQALAGHENV--VKFYNAFED-----DNYVYI 174 (577)
Q Consensus 110 g~V~~~~~~~~~~~vaiK~i~~~~~~---~~-----~~~~~~~~E~~~l~~l~~hpni--v~~~~~~~~-----~~~~~l 174 (577)
..|+.+. ..|+.|.||........ .. .....+.+|...+.+|. .-+| +..+.+.+. ...-+|
T Consensus 36 rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~-~~GIptP~pVa~~e~~~~~~~~~s~L 112 (268)
T PRK15123 36 RRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLH-EVGVDTMTGVAFGERGSNPATRTSFI 112 (268)
T ss_pred ceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHH-HcCCCCCCeeEEEEecCCCccceeEE
Confidence 3355553 45778888966332210 00 11124678988888874 2222 233333332 235789
Q ss_pred EEeccCCC-chhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec----
Q 008127 175 AMELCEGG-ELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS---- 249 (577)
Q Consensus 175 v~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~---- 249 (577)
|||++++. +|.+.+... .....+......++.+++..+.-||..||+|+||+|.|||++.
T Consensus 113 Vte~l~~~~sL~~~~~~~---------------~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~ 177 (268)
T PRK15123 113 ITEDLAPTISLEDYCADW---------------ATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPG 177 (268)
T ss_pred EEeeCCCCccHHHHHHhh---------------cccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccC
Confidence 99999875 676655321 1134556777889999999999999999999999999999984
Q ss_pred CCCCCCeeEEecCCCcc
Q 008127 250 AKEDSSLKATDFGLSDF 266 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~ 266 (577)
.+++..+.|+||+.+..
T Consensus 178 ~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 178 REEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCCCceEEEEECCcccc
Confidence 12357899999998864
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=9.3e-09 Score=90.07 Aligned_cols=107 Identities=22% Similarity=0.323 Sum_probs=78.0
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~ 488 (577)
.....+.. .+.++|..+|. ++|.|+..+|..+|...+....+++++...|+.+|.|+||.|+..|...++.. +
T Consensus 49 lg~~~s~~---ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~---l 121 (160)
T COG5126 49 LGFNPSEA---EINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKS---L 121 (160)
T ss_pred cCCCCcHH---HHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHh---h
Confidence 34444444 45566777777 88888888888888776667777888888888888888888888888876642 2
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
.+... ...+.+.++.+|.|++|+|+.+||.+++.
T Consensus 122 ge~~~---deev~~ll~~~d~d~dG~i~~~eF~~~~~ 155 (160)
T COG5126 122 GERLS---DEEVEKLLKEYDEDGDGEIDYEEFKKLIK 155 (160)
T ss_pred cccCC---HHHHHHHHHhcCCCCCceEeHHHHHHHHh
Confidence 11111 23677788888888888888888887553
|
|
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.4e-09 Score=94.88 Aligned_cols=101 Identities=18% Similarity=0.277 Sum_probs=82.6
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
.+..+|..+|.+++|.|+..||..++............++.+|+.+|.+++|.|+.+||..++..... ... ...
T Consensus 54 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~---~l~---~~~ 127 (158)
T PTZ00183 54 EIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGE---TIT---DEE 127 (158)
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC---CCC---HHH
Confidence 56788999999999999999999988654445566788999999999999999999999987754321 111 135
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcC
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGL 526 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~ 526 (577)
+..+|..+|.|++|.|+.+||..++..
T Consensus 128 ~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 128 LQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 778999999999999999999988754
|
|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.1e-09 Score=87.03 Aligned_cols=69 Identities=25% Similarity=0.366 Sum_probs=58.7
Q ss_pred HHHhhhcccccccc-CCCCC-CCCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAID-VDKNG-SISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~D-~d~dG-~i~~~el~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..+..+.++|+.|| .|+|| +|+..||+.+|...+ +...++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 45678899999999 88999 599999999996533 34457789999999999999999999999987654
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.7e-09 Score=85.10 Aligned_cols=69 Identities=22% Similarity=0.394 Sum_probs=61.4
Q ss_pred hHHHhhhccccccccC-CC-CCCCCHHHHHHHHHh--hCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 415 DEELADLRDQFDAIDV-DK-NGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~-d~-dG~i~~~el~~~l~~--~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
++.+..+-.+|+.+|. |+ +|+|+.+||+.+|.+ .+|..+++++++++|+.+|.|++|.|+|+||+..+.
T Consensus 6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~ 78 (88)
T cd05029 6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHH
Confidence 3556788999999998 77 899999999999964 368899999999999999999999999999997664
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.89 E-value=8.2e-09 Score=92.22 Aligned_cols=98 Identities=26% Similarity=0.281 Sum_probs=82.3
Q ss_pred HHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------
Q 008127 455 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 528 (577)
Q Consensus 455 ~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------ 528 (577)
..++..+|..+|.|++|.|+-.|+-.++........ ...+..+++.+|.|++|.|+.+||..++....
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t------~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~ 80 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPT------EEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDE 80 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCC------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccc
Confidence 357889999999999999999999987765433211 23677899999999999999999998886432
Q ss_pred -----cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 529 -----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 529 -----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
++.++|+.+|.|+||.|+.+|+..+|....
T Consensus 81 ~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg 115 (151)
T KOG0027|consen 81 EASSEELKEAFRVFDKDGDGFISASELKKVLTSLG 115 (151)
T ss_pred cccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC
Confidence 588999999999999999999999998754
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.3e-08 Score=96.08 Aligned_cols=138 Identities=28% Similarity=0.316 Sum_probs=101.8
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccc-------------------ccCchhhHHHHHHHHHHHHHhcCC-C
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN-------------------KMILPIAVEDVKREVKILQALAGH-E 157 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~-------------------~~~~~~~~~~~~~E~~~l~~l~~h-p 157 (577)
+.++.+||-|.-+.||.|.+. .|.++|||.-... ..+.-.......+|.++|.+|..+ -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 567889999999999999865 6889999953210 001122345678999999999533 2
Q ss_pred CeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCcee
Q 008127 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 237 (577)
Q Consensus 158 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiH 237 (577)
.+++-++ -+...+||||+.|-.|.. -++..+....++..|++-+.-+-..||||
T Consensus 172 ~VP~P~~----~nRHaVvMe~ieG~eL~~----------------------~r~~~en~~~il~~il~~~~~~~~~GiVH 225 (304)
T COG0478 172 KVPKPIA----WNRHAVVMEYIEGVELYR----------------------LRLDVENPDEILDKILEEVRKAYRRGIVH 225 (304)
T ss_pred CCCCccc----cccceeeeehcccceeec----------------------ccCcccCHHHHHHHHHHHHHHHHHcCccc
Confidence 4554443 234679999999876643 22345666777888888888778999999
Q ss_pred ccCCCCcEEeecCCCCCCeeEEecCCCc
Q 008127 238 RDMKPENFLFKSAKEDSSLKATDFGLSD 265 (577)
Q Consensus 238 rDlKp~NILl~~~~~~~~vkl~DFGla~ 265 (577)
+|+.+=||+++ +++.+.++||=-+.
T Consensus 226 GDlSefNIlV~---~dg~~~vIDwPQ~v 250 (304)
T COG0478 226 GDLSEFNILVT---EDGDIVVIDWPQAV 250 (304)
T ss_pred cCCchheEEEe---cCCCEEEEeCcccc
Confidence 99999999998 57899999996543
|
|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.88 E-value=4.4e-09 Score=85.12 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=52.3
Q ss_pred HHHHHHHhhcC-CCCCC-cccHHHHhhhhcCc------C-----cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFD-IDRDG-FITPEELRMHTGLK------G-----SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~~------~-----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++++|..|| +||+| +|+.+||+.++... + +++++++.+|.|+||.|+|+||+.+|...
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 46788999999 89999 59999999998541 1 49999999999999999999999999764
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.7e-09 Score=84.62 Aligned_cols=68 Identities=28% Similarity=0.404 Sum_probs=58.3
Q ss_pred HHhhhcccccccc-CCCCCC-CCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 417 ELADLRDQFDAID-VDKNGS-ISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 417 ~~~~l~~~F~~~D-~d~dG~-i~~~el~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
-+..++++|+.|| .|++|+ |+..||+.+|...+ +..+++.+++.+|+.+|.|++|.|+|+||+.++..
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 3467999999997 999995 99999999995433 34578899999999999999999999999986653
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.9e-09 Score=84.33 Aligned_cols=70 Identities=26% Similarity=0.434 Sum_probs=60.7
Q ss_pred hHHHhhhccccccccC--CCCCCCCHHHHHHHHHhhCCCC----ccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWK----LKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~--d~dG~i~~~el~~~l~~~~~~~----~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+++++.++++|..+|. |++|.|+.+||..++...+|.. +++.++..++..+|.+++|.|+|+||+.++..
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 4678889999999999 8999999999999995435544 45899999999999999999999999987653
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th |
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.8e-09 Score=85.37 Aligned_cols=68 Identities=26% Similarity=0.391 Sum_probs=59.3
Q ss_pred HHhhhccccccccC-CC-CCCCCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 417 ELADLRDQFDAIDV-DK-NGSISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 417 ~~~~l~~~F~~~D~-d~-dG~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
....++++|..||. |+ +|+|+..||..+|... +|..+++.+++.+++.+|.+++|.|+|+||+.++..
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 45679999999997 97 6999999999999532 466789999999999999999999999999987653
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.6e-08 Score=88.72 Aligned_cols=101 Identities=22% Similarity=0.337 Sum_probs=81.3
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
..+..+|..+|.+++|.|+.+||..++...+........+..+|..+|.+++|.|+.+||..++..... ... ..
T Consensus 47 ~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~---~~~---~~ 120 (149)
T PTZ00184 47 AELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE---KLT---DE 120 (149)
T ss_pred HHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC---CCC---HH
Confidence 367888999999999999999999988543444456678899999999999999999999877654311 111 13
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
.+..+|+.+|.+++|.|+.+||..++.
T Consensus 121 ~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 121 EVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 567789999999999999999987764
|
|
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.8e-08 Score=90.33 Aligned_cols=112 Identities=21% Similarity=0.237 Sum_probs=87.5
Q ss_pred hccccccccCCCCCC-CCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc-ccHHHHH
Q 008127 421 LRDQFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH-DSEKWHL 498 (577)
Q Consensus 421 l~~~F~~~D~d~dG~-i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~-~~~~~~~ 498 (577)
..++|+.||++++|. |+.++|..++.-..+....++.++-.|+.+|.+++|.|+.+|+..++......... ..+....
T Consensus 68 ~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~ 147 (187)
T KOG0034|consen 68 ADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLED 147 (187)
T ss_pred HHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHH
Confidence 356788899999998 99999999995544555555689999999999999999999999877654332111 1233445
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHH
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDP 532 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~ 532 (577)
.+..+|..+|.|+||+|+.+|+..++.....+.+
T Consensus 148 i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~~~ 181 (187)
T KOG0034|consen 148 IVDKTFEEADTDGDGKISFEEFCKVVEKQPDLLE 181 (187)
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHcCccHHH
Confidence 6788999999999999999999998876644444
|
|
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.1e-08 Score=81.74 Aligned_cols=62 Identities=23% Similarity=0.392 Sum_probs=53.7
Q ss_pred HHHHHHHHhh-cCCCCCC-cccHHHHhhhhcCc-----------CcHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 497 HLRSQAAFEK-FDIDRDG-FITPEELRMHTGLK-----------GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 497 ~~~~~~~F~~-~D~d~~G-~I~~~El~~~l~~~-----------~~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
...+..+|+. +|+||+| +|+.+||+.++... .+++++|+.+|.|+||.|+|+||+.+|....
T Consensus 8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 3467889999 7899987 99999999998765 1499999999999999999999999987643
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.6e-08 Score=80.64 Aligned_cols=62 Identities=23% Similarity=0.317 Sum_probs=53.8
Q ss_pred HHHHHHHHhhcCC-CC-CCcccHHHHhhhhcC---cC------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 497 HLRSQAAFEKFDI-DR-DGFITPEELRMHTGL---KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 497 ~~~~~~~F~~~D~-d~-~G~I~~~El~~~l~~---~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
...+..+|..||. || +|+|+.+||+.++.. .| +++++|+.+|.|+||+|+|+||+.+|.+..
T Consensus 9 ~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~ 81 (88)
T cd05029 9 IGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA 81 (88)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 3467889999998 77 899999999999952 34 499999999999999999999999997643
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.3e-08 Score=77.17 Aligned_cols=61 Identities=31% Similarity=0.367 Sum_probs=54.1
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
++++|..+|.|++|.|+.+||..++.. +|. ++++++.++..+|.+++|.|+|+||+.++..
T Consensus 1 ~~~~F~~~D~~~~G~i~~~el~~~l~~-~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 1 YDQIFRSLDPDGDGLISGDEARPFLGK-SGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred ChHHHHHhCCCCCCcCcHHHHHHHHHH-cCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 357899999999999999999999954 664 7889999999999999999999999987654
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.77 E-value=8.5e-10 Score=114.38 Aligned_cols=240 Identities=18% Similarity=0.218 Sum_probs=167.1
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCC-eeEEEEEEEcCCeEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn-iv~~~~~~~~~~~~~lv 175 (577)
-|....-+++|+++++++.+...+...+ .+.+... ....-++++|.++ +||| .+..++-++.+.+.+++
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~-n~P~~~v~~~~d~~~E~~~~i~ 312 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKV-NNPNPVVRYLEDYDGEDYLWIP 312 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHc-cCCCCcccccccCCcccccchh
Confidence 3555566899999999999876665554 6665432 3456688999999 5999 77777777888899999
Q ss_pred EeccCCC-chhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGG-ELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
+++|.++ +...... ...-.+.+-+...+...-+++++++|+..=+||| |||.. ++
T Consensus 313 ~~i~s~~rs~~~~~~----------------~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s----~~ 368 (829)
T KOG0576|consen 313 MRICSTGRSSALEMT----------------VSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS----EE 368 (829)
T ss_pred hhhhcCCccccccCC----------------hhhHhhhhhhhhhhhhhhcccccccccccccCcc----ccccc----cc
Confidence 9999887 2221110 0012234445566777888899999998889999 88876 46
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC--
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-- 331 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~-- 331 (577)
.+|+.||+....+..........+|+.|+|||+.. +.+....|+||+|+-..+|.-|-+|-.. +......+-.+.
T Consensus 369 ~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~--P~~~~~~~g~~p~s 446 (829)
T KOG0576|consen 369 EVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS--PPAVLPMIGNGPNS 446 (829)
T ss_pred ccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC--CccccCCCCCCCCc
Confidence 78999999988776655566788999999999765 4567889999999988888888777532 111110000000
Q ss_pred CCCCC-CCCCCCCHHHH-HHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 332 PDFRR-KPWPSISNSAK-DFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 332 ~~~~~-~~~~~~s~~~~-~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
+.... ..|. +... ++...|+..-|..|+....++-|.+|..
T Consensus 447 ~~L~~~~aw~---~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfng 489 (829)
T KOG0576|consen 447 PMLTDKSAWS---PVFHRDFPAPCLNGLPPTPKVHMGACFSKVFNG 489 (829)
T ss_pred cccchhhhcC---cccccCCcccccCCCCCCCcchhhHHHHHHhcc
Confidence 00000 1111 1112 4777899999999999999999988875
|
|
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.2e-08 Score=83.10 Aligned_cols=62 Identities=21% Similarity=0.389 Sum_probs=53.5
Q ss_pred HHHHHHHhhcCC-CC-CCcccHHHHhhhhcC-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHhhccc
Q 008127 498 LRSQAAFEKFDI-DR-DGFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 559 (577)
Q Consensus 498 ~~~~~~F~~~D~-d~-~G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~~ 559 (577)
..++.+|+.||. |+ +|+|+.+||+.++.. ++ +++.+++.+|.|+||.|+|+||+.+|...++
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~ 82 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI 82 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 467889999997 97 799999999998864 22 4899999999999999999999999986553
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.3e-08 Score=81.20 Aligned_cols=70 Identities=20% Similarity=0.311 Sum_probs=59.3
Q ss_pred hHHHhhhcccccc-ccCCCCC-CCCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDA-IDVDKNG-SISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~-~D~d~dG-~i~~~el~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..+..|..+|+. +|.|++| +|+.+||+.++...+ +....+.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 5 e~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 5 ERCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 3457788999999 8899987 999999999997754 33455789999999999999999999999987654
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.3e-08 Score=81.01 Aligned_cols=60 Identities=20% Similarity=0.350 Sum_probs=52.6
Q ss_pred HHHHHHHhhcC-CCCCCc-ccHHHHhhhhcC-cC----------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFD-IDRDGF-ITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D-~d~~G~-I~~~El~~~l~~-~~----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++++|+.|| +|++|+ |+.+||+.++.. .+ +++++|+.+|.|++|.|+|+||+.++...
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 46888999997 999995 999999999964 21 48999999999999999999999998753
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.8e-08 Score=82.34 Aligned_cols=60 Identities=30% Similarity=0.350 Sum_probs=51.5
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc--CcHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 496 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--GSIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 496 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~--~~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
+...+..+|..+|+|+||+|+.+||..+.... ..+..+|..+|.|+||.||++||+..+.
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIRLDPNEHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 34578889999999999999999999876222 1378899999999999999999999883
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. |
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.4e-08 Score=75.68 Aligned_cols=57 Identities=32% Similarity=0.529 Sum_probs=51.1
Q ss_pred HHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 501 QAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 501 ~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
+++|+.+|+|++|.|+.+|++.++...+ ++..+++.+|.+++|.|+|+||+.++...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 3589999999999999999999887665 48899999999999999999999988653
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.7e-08 Score=82.98 Aligned_cols=102 Identities=16% Similarity=0.243 Sum_probs=84.0
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
.++.++-..+|+++.|+|+.++|...+...++...+.+++...|+.+|.|++|.|++.+|..++... -+.-.. .
T Consensus 69 ~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeL---genltD---~ 142 (172)
T KOG0028|consen 69 EEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKEL---GENLTD---E 142 (172)
T ss_pred HHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHh---CccccH---H
Confidence 4566677788999999999999999988888888899999999999999999999999999766433 222221 2
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcC
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGL 526 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~ 526 (577)
.+.+.-.-+|.|++|-|+.+||..+++.
T Consensus 143 El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 143 ELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHHHHHhcccccccccHHHHHHHHhc
Confidence 5666778899999999999999887753
|
|
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.8e-08 Score=80.45 Aligned_cols=62 Identities=23% Similarity=0.342 Sum_probs=55.0
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
...++.+|+.||+|++|.|+.+|++.++...+ ++..++..+|.+++|.|+|+||+.+|....
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY 74 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 34688899999999999999999999987665 589999999999999999999999887533
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.6e-08 Score=71.18 Aligned_cols=51 Identities=37% Similarity=0.629 Sum_probs=47.4
Q ss_pred CCCCCCHHHHHHHHHhhCCCC-ccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 432 KNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 432 ~dG~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
.+|.|+.+||..+| ..+|.. +++.++..+|..+|.|++|.|+|+||+.++.
T Consensus 1 ~~G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 1 KDGKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSSEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CcCEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 47999999999999 668999 9999999999999999999999999998764
|
... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 577 | ||||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 5e-69 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 5e-69 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 4e-67 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 4e-67 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 5e-67 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 1e-65 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 3e-64 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 3e-62 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 7e-54 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 1e-53 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 9e-53 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 2e-52 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 2e-52 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 3e-51 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 3e-51 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 9e-51 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-50 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 3e-50 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-50 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 7e-50 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 3e-47 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-44 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 1e-41 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 1e-41 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 1e-41 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 1e-41 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 1e-41 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 1e-41 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 5e-41 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 5e-41 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 7e-41 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 8e-41 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 9e-41 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 1e-40 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 1e-40 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 3e-40 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 3e-40 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 4e-40 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 5e-40 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 5e-40 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 6e-40 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 7e-40 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 7e-40 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 7e-40 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 8e-40 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 8e-40 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 9e-40 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 9e-40 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 1e-39 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 1e-39 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 1e-39 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 1e-39 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 1e-39 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 1e-39 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 1e-39 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 1e-39 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 2e-39 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 2e-39 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 3e-39 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-39 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 5e-39 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 5e-39 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 5e-39 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 5e-39 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 9e-39 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 1e-38 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 3e-38 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 4e-38 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 8e-38 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 5e-37 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 6e-37 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 8e-37 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 1e-36 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 1e-36 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 6e-36 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 8e-36 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 9e-36 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 1e-35 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 1e-35 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 2e-35 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 2e-35 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 5e-35 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 6e-35 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 8e-35 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-34 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 1e-34 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 1e-34 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 1e-34 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-34 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-34 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 4e-34 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 6e-34 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 1e-33 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 1e-33 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 2e-33 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 3e-33 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 3e-33 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 1e-32 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 1e-32 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 1e-32 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 2e-32 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 2e-32 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 3e-32 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 7e-32 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 7e-32 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 3e-31 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 3e-31 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 3e-31 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 3e-31 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 3e-31 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 4e-31 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 6e-31 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 7e-31 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 8e-31 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 8e-31 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 9e-31 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 1e-30 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-30 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 1e-30 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-30 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 2e-30 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 2e-30 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 2e-30 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 2e-30 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 2e-30 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 2e-30 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-30 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 2e-30 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 2e-30 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 2e-30 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 2e-30 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 2e-30 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 2e-30 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 2e-30 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 3e-30 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 3e-30 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 3e-30 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 3e-30 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 3e-30 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-30 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-30 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 3e-30 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 4e-30 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 4e-30 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 4e-30 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 4e-30 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 4e-30 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 4e-30 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 4e-30 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 4e-30 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 4e-30 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-30 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 5e-30 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 5e-30 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 5e-30 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 5e-30 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 5e-30 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 5e-30 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 6e-30 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 6e-30 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 6e-30 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 6e-30 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 6e-30 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 7e-30 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 7e-30 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 7e-30 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 7e-30 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-30 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 7e-30 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 8e-30 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 8e-30 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 8e-30 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 8e-30 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 8e-30 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 8e-30 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 9e-30 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 9e-30 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 1e-29 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 1e-29 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-29 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 1e-29 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 1e-29 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-29 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 1e-29 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-29 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 1e-29 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-29 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 1e-29 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 1e-29 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 1e-29 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 2e-29 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 2e-29 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 2e-29 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 2e-29 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 2e-29 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 2e-29 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 3e-29 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 3e-29 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-29 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 3e-29 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 3e-29 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 3e-29 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 3e-29 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 9e-29 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 1e-28 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 2e-28 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 4e-28 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 6e-28 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 8e-28 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 2e-27 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 2e-27 | ||
| 2aao_A | 166 | Regulatory Apparatus Of Calcium Dependent Protein K | 7e-27 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 1e-26 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 1e-26 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 1e-26 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 1e-26 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 1e-26 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 2e-26 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 2e-26 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 2e-26 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 2e-26 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 4e-26 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 4e-25 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 7e-25 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 8e-25 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 8e-25 | ||
| 3kga_A | 299 | Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe | 9e-25 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 1e-24 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 1e-24 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 1e-24 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 1e-24 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 1e-24 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 2e-24 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 2e-24 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 4e-24 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 5e-24 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 5e-24 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 3e-23 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 3e-23 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 3e-23 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 4e-23 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 4e-23 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 5e-23 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 7e-23 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 9e-23 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 1e-22 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 2e-22 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-22 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-22 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 3e-22 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 4e-22 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 4e-22 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 4e-22 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 4e-22 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 6e-22 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 7e-22 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 7e-22 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 7e-22 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 8e-22 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 1e-21 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 1e-21 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 1e-21 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 1e-21 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 1e-21 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 1e-21 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 1e-21 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 1e-21 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 2e-21 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-21 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 2e-21 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-21 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 2e-21 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-21 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 2e-21 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 2e-21 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 2e-21 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 2e-21 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 2e-21 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 2e-21 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 2e-21 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 2e-21 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 2e-21 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 2e-21 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 2e-21 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 3e-21 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 3e-21 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 3e-21 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 3e-21 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 3e-21 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 3e-21 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 3e-21 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 5e-21 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 5e-21 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 5e-21 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 7e-21 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 7e-21 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 7e-21 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 7e-21 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 7e-21 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 8e-21 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 8e-21 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 8e-21 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 8e-21 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 9e-21 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 1e-20 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 1e-20 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 1e-20 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 1e-20 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 1e-20 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 1e-20 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 1e-20 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 1e-20 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 2e-20 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 2e-20 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 2e-20 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 2e-20 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 2e-20 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 2e-20 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 2e-20 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 2e-20 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 3e-20 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 3e-20 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 3e-20 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 3e-20 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 3e-20 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 3e-20 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 4e-20 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 4e-20 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 4e-20 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 4e-20 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 5e-20 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 5e-20 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 5e-20 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 5e-20 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 5e-20 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 5e-20 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 5e-20 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 5e-20 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 6e-20 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 6e-20 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 6e-20 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 6e-20 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 7e-20 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 7e-20 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 7e-20 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 7e-20 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 8e-20 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 8e-20 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 8e-20 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 8e-20 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 9e-20 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 9e-20 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 9e-20 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 9e-20 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 9e-20 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-19 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 1e-19 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-19 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 1e-19 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 1e-19 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 1e-19 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 1e-19 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 1e-19 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 1e-19 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 1e-19 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 1e-19 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 1e-19 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 1e-19 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 1e-19 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 1e-19 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 1e-19 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 1e-19 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 1e-19 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 1e-19 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 1e-19 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 1e-19 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 1e-19 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 1e-19 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 1e-19 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 1e-19 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 1e-19 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 2e-19 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 2e-19 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 2e-19 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 2e-19 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-19 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-19 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 2e-19 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 3e-19 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 3e-19 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 3e-19 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-19 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 4e-19 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 4e-19 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 4e-19 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 5e-19 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 5e-19 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 7e-19 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 8e-19 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 8e-19 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 9e-19 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 9e-19 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 1e-18 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 1e-18 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 1e-18 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 1e-18 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-18 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 1e-18 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 1e-18 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 1e-18 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 1e-18 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 1e-18 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-18 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 2e-18 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 2e-18 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 2e-18 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-18 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 2e-18 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 2e-18 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 2e-18 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 2e-18 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 2e-18 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 2e-18 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 2e-18 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-18 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 2e-18 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 2e-18 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 2e-18 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 2e-18 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 3e-18 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 3e-18 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 3e-18 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 3e-18 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 3e-18 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 3e-18 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 3e-18 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 3e-18 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 3e-18 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 4e-18 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 4e-18 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 4e-18 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 4e-18 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 4e-18 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 4e-18 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 4e-18 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 4e-18 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 4e-18 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 4e-18 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 4e-18 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 4e-18 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 5e-18 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 5e-18 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 5e-18 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 5e-18 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 5e-18 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 5e-18 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 5e-18 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 5e-18 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 6e-18 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 6e-18 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 6e-18 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 6e-18 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 6e-18 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 6e-18 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 6e-18 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 6e-18 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 6e-18 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 6e-18 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 6e-18 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 6e-18 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 6e-18 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 6e-18 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 6e-18 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 6e-18 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 6e-18 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 6e-18 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 7e-18 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 7e-18 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 7e-18 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 7e-18 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 7e-18 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 7e-18 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 7e-18 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 7e-18 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 7e-18 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 8e-18 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 8e-18 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 8e-18 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 8e-18 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 8e-18 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 8e-18 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 8e-18 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 8e-18 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 8e-18 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 8e-18 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 8e-18 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 9e-18 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 9e-18 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 9e-18 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 9e-18 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 9e-18 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 9e-18 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 1e-17 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 1e-17 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 1e-17 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 1e-17 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 1e-17 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 1e-17 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 1e-17 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 1e-17 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 1e-17 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 1e-17 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 1e-17 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 1e-17 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 1e-17 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 1e-17 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 1e-17 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 1e-17 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-17 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 2e-17 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 2e-17 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 2e-17 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 2e-17 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 2e-17 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 3e-17 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 3e-17 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 3e-17 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 3e-17 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 3e-17 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 3e-17 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 3e-17 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 3e-17 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 3e-17 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 4e-17 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 4e-17 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 4e-17 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 4e-17 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 4e-17 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 4e-17 | ||
| 3pm8_A | 197 | Cad Domain Of Pff0520w, Calcium Dependent Protein K | 4e-17 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 5e-17 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 5e-17 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 5e-17 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 5e-17 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 5e-17 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 5e-17 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 5e-17 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 6e-17 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 7e-17 | ||
| 1s6i_A | 188 | Ca2+-Regulatory Region (Cld) From Soybean Calcium-D | 7e-17 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 7e-17 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 7e-17 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 8e-17 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 8e-17 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 8e-17 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 8e-17 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 1e-16 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 1e-16 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 1e-16 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 1e-16 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 1e-16 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 2e-16 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 2e-16 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 2e-16 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 2e-16 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 2e-16 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 3e-16 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 3e-16 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 3e-16 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 3e-16 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 3e-16 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 4e-16 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 4e-16 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 4e-16 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 4e-16 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 4e-16 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 4e-16 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 5e-16 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 5e-16 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 5e-16 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 6e-16 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 6e-16 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 6e-16 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 7e-16 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 7e-16 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 7e-16 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 1e-15 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 1e-15 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 1e-15 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 2e-15 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 2e-15 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 2e-15 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 2e-15 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 2e-15 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 2e-15 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 2e-15 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 2e-15 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 2e-15 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 2e-15 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 3e-15 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 3e-15 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 3e-15 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 3e-15 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 3e-15 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 3e-15 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 3e-15 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-15 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-15 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-15 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 4e-15 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 4e-15 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 5e-15 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 6e-15 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 8e-15 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-14 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 1e-14 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 2e-14 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 2e-14 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 2e-14 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 3e-14 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 3e-14 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 4e-14 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 5e-14 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 6e-14 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 7e-14 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 1e-13 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 1e-13 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-13 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 1e-13 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 1e-13 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 2e-13 | ||
| 3sg7_A | 448 | Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4 | 3e-13 | ||
| 3sg5_A | 448 | Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke | 4e-13 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 4e-13 | ||
| 1ooj_A | 149 | Structural Genomics Of Caenorhabditis Elegans : Cal | 4e-13 | ||
| 3sg4_A | 448 | Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len | 4e-13 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-13 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 5e-13 | ||
| 4djc_A | 152 | 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA | 5e-13 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-13 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-13 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 5e-13 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 5e-13 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 6e-13 | ||
| 3sg3_A | 449 | Crystal Structure Of Gcamp3-D380y Length = 449 | 7e-13 | ||
| 3u0k_A | 440 | Crystal Structure Of The Genetically Encoded Calciu | 7e-13 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 7e-13 | ||
| 3sg6_A | 450 | Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L | 8e-13 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 9e-13 | ||
| 1vrk_A | 148 | The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 | 9e-13 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 9e-13 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 9e-13 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 9e-13 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 9e-13 | ||
| 3evu_A | 449 | Crystal Structure Of Calcium Bound Dimeric Gcamp2, | 1e-12 | ||
| 3ek8_A | 449 | Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L | 1e-12 | ||
| 2bkh_B | 149 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-12 | ||
| 2k0j_A | 148 | Solution Structure Of Cam Complexed To Drp1p Length | 1e-12 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 1e-12 | ||
| 2wel_D | 150 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 1e-12 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 1e-12 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 1e-12 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 1e-12 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 1e-12 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 1e-12 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 1e-12 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 1e-12 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 1e-12 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 1e-12 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 1e-12 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 1e-12 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 1e-12 | ||
| 1iq5_A | 149 | CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE | 1e-12 | ||
| 2ygg_B | 150 | Complex Of Cambr And Cam Length = 150 | 1e-12 | ||
| 2f2o_A | 179 | Structure Of Calmodulin Bound To A Calcineurin Pept | 1e-12 | ||
| 1exr_A | 148 | The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca | 1e-12 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 1e-12 | ||
| 3evr_A | 411 | Crystal Structure Of Calcium Bound Monomeric Gcamp2 | 1e-12 | ||
| 1clm_A | 148 | Structure Of Paramecium Tetraurelia Calmodulin At 1 | 1e-12 | ||
| 2be6_A | 150 | 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC | 1e-12 | ||
| 1xfu_O | 149 | Crystal Structure Of Anthrax Edema Factor (ef) Trun | 1e-12 | ||
| 1qtx_A | 148 | The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept | 1e-12 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 2e-12 | ||
| 4aqr_A | 149 | Crystal Structure Of A Calmodulin In Complex With T | 2e-12 | ||
| 2lv6_A | 148 | The Complex Between Ca-calmodulin And Skeletal Musc | 2e-12 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 2e-12 | ||
| 2bbm_A | 148 | Solution Structure Of A Calmodulin-Target Peptide C | 2e-12 | ||
| 3o78_A | 415 | The Structure Of Ca2+ Sensor (Case-12) Length = 415 | 2e-12 | ||
| 3o77_A | 415 | The Structure Of Ca2+ Sensor (Case-16) Length = 415 | 2e-12 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 2e-12 | ||
| 3sg2_A | 449 | Crystal Structure Of Gcamp2-T116v,D381y Length = 44 | 2e-12 | ||
| 2vb6_B | 149 | Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo | 2e-12 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-12 | ||
| 1prw_A | 149 | Crystal Structure Of Bovine Brain Ca++ Calmodulin I | 2e-12 | ||
| 1up5_B | 148 | Chicken Calmodulin Length = 148 | 2e-12 | ||
| 1cdl_A | 147 | Target Enzyme Recognition By Calmodulin: 2.4 Angstr | 2e-12 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-12 | ||
| 3l19_A | 214 | Crystal Structure Of Calcium Binding Domain Of Cpcd | 3e-12 | ||
| 3ekh_A | 449 | Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER | 3e-12 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 3e-12 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 3e-12 | ||
| 3ewt_A | 154 | Crystal Structure Of Calmodulin Complexed With A Pe | 3e-12 | ||
| 1cm1_A | 148 | Motions Of Calmodulin-Single-Conformer Refinement L | 3e-12 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 3e-12 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 3e-12 | ||
| 1qs7_A | 145 | The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti | 3e-12 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 3e-12 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 3e-12 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 3e-12 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 3e-12 | ||
| 2lmt_A | 148 | Nmr Structure Of Androcam Length = 148 | 3e-12 | ||
| 3k21_A | 191 | Crystal Structure Of Carboxy-Terminus Of Pfc0420w L | 4e-12 | ||
| 1cdm_A | 144 | Modulation Of Calmodulin Plasticity In Molecular Re | 4e-12 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 4e-12 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 4e-12 | ||
| 2l1w_A | 149 | The Solution Structure Of Soybean Calmodulin Isofor | 5e-12 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 5e-12 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 5e-12 | ||
| 4gow_D | 144 | Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX | 5e-12 | ||
| 2ix7_A | 145 | Structure Of Apo-Calmodulin Bound To Unconventional | 5e-12 | ||
| 2vay_A | 146 | Calmodulin Complexed With Cav1.1 Iq Peptide Length | 5e-12 | ||
| 1rfj_A | 149 | Crystal Structure Of Potato Calmodulin Pcm6 Length | 6e-12 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 6e-12 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-12 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-12 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 8e-12 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 8e-12 | ||
| 1dmo_A | 148 | Calmodulin, Nmr, 30 Structures Length = 148 | 8e-12 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 9e-12 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 9e-12 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 1e-11 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 1e-11 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 1e-11 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-11 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 1e-11 | ||
| 1k93_D | 144 | Crystal Structure Of The Adenylyl Cyclase Domain Of | 1e-11 | ||
| 1y0v_H | 146 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 1e-11 | ||
| 3anq_A | 368 | Human Dyrk1aINHIBITOR COMPLEX Length = 368 | 1e-11 | ||
| 2vx3_A | 382 | Crystal Structure Of The Human Dual Specificity Tyr | 1e-11 | ||
| 4f99_A | 361 | Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti | 1e-11 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 1e-11 | ||
| 3khe_A | 191 | Crystal Structure Of The Calcium-Loaded Calmodulin- | 2e-11 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 2e-11 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 2e-11 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-11 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 2e-11 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 2e-11 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-11 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 2e-11 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 2e-11 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 2e-11 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 2e-11 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-11 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 3e-11 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 3e-11 | ||
| 1ahr_A | 146 | Calmodulin Mutant With A Two Residue Deletion In Th | 3e-11 | ||
| 1deg_A | 142 | The Linker Of Des-Glu84 Calmodulin Is Bent As Seen | 3e-11 | ||
| 2lhi_A | 176 | Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L | 3e-11 | ||
| 1eh4_A | 298 | Binary Complex Of Casein Kinase-1 From S. Pombe Wit | 4e-11 | ||
| 4aze_A | 382 | Human Dyrk1a In Complex With Leucettine L41 Length | 4e-11 | ||
| 2csn_A | 297 | Binary Complex Of Casein Kinase-1 With Cki7 Length | 5e-11 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 5e-11 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 5e-11 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 7e-11 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 8e-11 | ||
| 1mf8_B | 170 | Crystal Structure Of Human Calcineurin Complexed Wi | 9e-11 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 1e-10 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 1e-10 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-10 | ||
| 1tco_B | 169 | Ternary Complex Of A Calcineurin A Fragment, Calcin | 1e-10 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 1e-10 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 1e-10 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-10 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 2e-10 | ||
| 3o4y_A | 196 | Crystal Structure Of Cad Domain Of The Plasmodium V | 2e-10 | ||
| 1lkj_A | 146 | Nmr Structure Of Apo Calmodulin From Yeast Saccharo | 2e-10 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 2e-10 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-10 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 2e-10 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-10 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 2e-10 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 2e-10 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 2e-10 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 2e-10 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 2e-10 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-10 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 2e-10 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-10 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 3e-10 | ||
| 1q8y_A | 373 | The Structure Of The Yeast Sr Protein Kinase, Sky1p | 3e-10 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 3e-10 | ||
| 2p6b_B | 156 | Crystal Structure Of Human Calcineurin In Complex W | 3e-10 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 3e-10 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 4e-10 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 4e-10 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 4e-10 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-10 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 4e-10 | ||
| 1how_A | 373 | The X-Ray Crystal Structure Of Sky1p, An Sr Protein | 4e-10 | ||
| 1ggz_A | 148 | Crystal Structure Of The Calmodulin-Like Protein (H | 4e-10 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 4e-10 | ||
| 3ll8_B | 155 | Crystal Structure Of Calcineurin In Complex With Ak | 6e-10 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 6e-10 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 6e-10 | ||
| 1xfx_O | 149 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 6e-10 | ||
| 1niw_A | 148 | Crystal Structure Of Endothelial Nitric Oxide Synth | 7e-10 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 7e-10 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 7e-10 | ||
| 4ds7_A | 147 | Crystal Structure Of Yeast Calmodulin Bound To The | 8e-10 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 8e-10 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 9e-10 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-10 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 9e-10 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-09 | ||
| 1ckj_A | 317 | Casein Kinase I Delta Truncation Mutant Containing | 1e-09 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-09 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-09 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-09 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 1e-09 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 1e-09 | ||
| 3uys_A | 296 | Crystal Structure Of Apo Human Ck1d Length = 296 | 1e-09 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-09 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 2e-09 | ||
| 1y6w_A | 148 | Trapped Intermediate Of Calmodulin Length = 148 | 2e-09 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-09 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 3e-09 | ||
| 3qrx_A | 169 | Chlamydomonas Reinhardtii Centrin Bound To Melittin | 3e-09 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 3e-09 | ||
| 2in6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd311839 Length | 3e-09 | ||
| 3bi6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd352396 Length | 4e-09 | ||
| 2lan_A | 167 | Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc | 4e-09 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 4e-09 | ||
| 1a2x_A | 159 | Complex Of Troponin C With A 47 Residue (1-47) Frag | 4e-09 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 4e-09 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 4e-09 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 4e-09 | ||
| 1x8b_A | 289 | Structure Of Human Wee1a Kinase: Kinase Domain Comp | 4e-09 | ||
| 1tnw_A | 162 | Nmr Solution Structure Of Calcium Saturated Skeleta | 4e-09 | ||
| 2lhh_A | 128 | Solution Structure Of Ca2+-Bound Ycam Length = 128 | 4e-09 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 4e-09 | ||
| 2z2w_A | 285 | Humand Wee1 Kinase Complexed With Inhibitor Pf03357 | 4e-09 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 4e-09 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 5e-09 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 5e-09 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 5e-09 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 5e-09 | ||
| 5tnc_A | 162 | Refined Crystal Structure Of Troponin C From Turkey | 5e-09 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 6e-09 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 6e-09 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 6e-09 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 6e-09 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 7e-09 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 7e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 7e-09 | ||
| 3ox6_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 7e-09 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 7e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 7e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 7e-09 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 8e-09 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 8e-09 | ||
| 1ytz_C | 162 | Crystal Structure Of Skeletal Muscle Troponin In Th | 8e-09 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 8e-09 | ||
| 3ox5_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 8e-09 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 8e-09 | ||
| 2w49_0 | 159 | Isometrically Contracting Insect Asynchronous Fligh | 9e-09 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 9e-09 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 9e-09 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 9e-09 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 1e-08 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 1e-08 | ||
| 4tnc_A | 162 | Refined Structure Of Chicken Skeletal Muscle Tropon | 1e-08 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 1e-08 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 1e-08 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 1e-08 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 1e-08 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 1e-08 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-08 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 1e-08 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 1e-08 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 1e-08 | ||
| 2pzi_A | 681 | Crystal Structure Of Protein Kinase Pkng From Mycob | 1e-08 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 1e-08 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 1e-08 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 1e-08 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 1e-08 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 2e-08 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 2e-08 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-08 | ||
| 1s6j_A | 87 | N-Terminal Region Of The Ca2+-Saturated Calcium Reg | 2e-08 | ||
| 1z57_A | 339 | Crystal Structure Of Human Clk1 In Complex With 10z | 2e-08 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 2e-08 | ||
| 3nr9_A | 368 | Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length | 2e-08 | ||
| 3sv0_A | 483 | Crystal Structure Of Casein Kinase-1 Like Protein I | 2e-08 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-08 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 2e-08 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 2e-08 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 3e-08 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 3e-08 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 3e-08 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 3e-08 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-08 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 3e-08 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 3e-08 | ||
| 3mse_B | 180 | Crystal Structure Of C-Terminal Domain Of Pf110239 | 4e-08 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 4e-08 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 4e-08 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 4e-08 | ||
| 1tcf_A | 159 | Crystal Structure Of Calcium-Saturated Rabbit Skele | 5e-08 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 5e-08 | ||
| 2vag_A | 339 | Crystal Structure Of Di-Phosphorylated Human Clk1 I | 5e-08 | ||
| 2exe_A | 357 | Crystal Structure Of The Phosphorylated Clk3 Length | 5e-08 | ||
| 3kf9_A | 149 | Crystal Structure Of The SdcenSKMLCK COMPLEX Length | 5e-08 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 6e-08 | ||
| 2eu9_A | 355 | Crystal Structure Of Clk3 Length = 355 | 6e-08 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 6e-08 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 7e-08 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 7e-08 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 7e-08 | ||
| 2wu6_A | 381 | Crystal Structure Of The Human Clk3 In Complex With | 7e-08 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 7e-08 | ||
| 4hni_A | 296 | Crystal Structure Of Ck1e In Complex With Pf4800567 | 8e-08 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 9e-08 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 1e-07 | ||
| 2obh_A | 143 | Centrin-Xpc Peptide Length = 143 | 1e-07 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 1e-07 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-07 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 1e-07 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 1e-07 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 1e-07 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 1e-07 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-07 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 1e-07 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 1e-07 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 2e-07 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 2e-07 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 2e-07 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 2e-07 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-07 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 2e-07 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 2e-07 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 2e-07 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 2e-07 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 2e-07 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 2e-07 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-07 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 2e-07 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 2e-07 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 2e-07 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 2e-07 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-07 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 2e-07 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-07 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 2e-07 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 2e-07 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 2e-07 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 2e-07 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-07 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 2e-07 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 2e-07 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 2e-07 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 2e-07 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-07 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-07 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 3e-07 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 3e-07 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 3e-07 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 3e-07 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 3e-07 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 3e-07 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 3e-07 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 3e-07 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 3e-07 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 3e-07 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 4e-07 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-07 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 5e-07 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 5e-07 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 6e-07 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 7e-07 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 7e-07 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 9e-07 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 9e-07 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 9e-07 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 1e-06 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-06 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 1e-06 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 2e-06 | ||
| 2jnx_A | 134 | Nmr Derived Solution Structure Of An Ef-Hand Calciu | 2e-06 | ||
| 2c47_A | 313 | Structure Of Casein Kinase 1 Gamma 2 Length = 313 | 3e-06 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-06 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 3e-06 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-06 | ||
| 2k7c_A | 72 | Nmr Structure Of Mg2+-Bound Cabp1 C-Domain Length = | 3e-06 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 3e-06 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 3e-06 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 4e-06 | ||
| 1aj4_A | 161 | Structure Of Calcium-Saturated Cardiac Troponin C, | 4e-06 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-06 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-06 | ||
| 1dtl_A | 161 | Crystal Structure Of Calcium-Saturated (3ca2+) Card | 4e-06 |
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448 | Back alignment and structure |
|
| >pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449 | Back alignment and structure |
|
| >pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449 | Back alignment and structure |
|
| >pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149 | Back alignment and structure |
|
| >pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149 | Back alignment and structure |
|
| >pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150 | Back alignment and structure |
|
| >pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179 | Back alignment and structure |
|
| >pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411 | Back alignment and structure |
|
| >pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148 | Back alignment and structure |
|
| >pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150 | Back alignment and structure |
|
| >pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149 | Back alignment and structure |
|
| >pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148 | Back alignment and structure |
|
| >pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415 | Back alignment and structure |
|
| >pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449 | Back alignment and structure |
|
| >pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149 | Back alignment and structure |
|
| >pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214 | Back alignment and structure |
|
| >pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154 | Back alignment and structure |
|
| >pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2LMT|A Chain A, Nmr Structure Of Androcam Length = 148 | Back alignment and structure |
|
| >pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191 | Back alignment and structure |
|
| >pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144 | Back alignment and structure |
|
| >pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145 | Back alignment and structure |
|
| >pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146 | Back alignment and structure |
|
| >pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144 | Back alignment and structure |
|
| >pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146 | Back alignment and structure |
|
| >pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368 | Back alignment and structure |
|
| >pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382 | Back alignment and structure |
|
| >pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii Length = 191 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146 | Back alignment and structure |
|
| >pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142 | Back alignment and structure |
|
| >pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176 | Back alignment and structure |
|
| >pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298 | Back alignment and structure |
|
| >pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382 | Back alignment and structure |
|
| >pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 170 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 169 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax Cdpk, Pvx_11610 Length = 196 | Back alignment and structure |
|
| >pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 156 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373 | Back alignment and structure |
|
| >pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 155 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149 | Back alignment and structure |
|
| >pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287 | Back alignment and structure |
|
| >pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287 | Back alignment and structure |
|
| >pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc Length = 167 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of Troponin I Length = 159 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289 | Back alignment and structure |
|
| >pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle Troponin C Length = 162 | Back alignment and structure |
|
| >pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal Muscle At 2.0 Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated State Length = 162 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 159 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In The Two-Calcium State At 2-Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87 | Back alignment and structure |
|
| >pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368 | Back alignment and structure |
|
| >pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239 Length = 180 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal Troponin C Length = 159 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357 | Back alignment and structure |
|
| >pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2OBH|A Chain A, Centrin-Xpc Peptide Length = 143 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica Length = 134 | Back alignment and structure |
|
| >pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain Length = 72 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1 Structure Length = 161 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac Troponin C Complexed With The Calcium Sensitizer Bepridil At 2.15 A Resolution Length = 161 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 609 bits (1572), Expect = 0.0
Identities = 159/502 (31%), Positives = 245/502 (48%), Gaps = 49/502 (9%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
R + + F RY I +LG G FG D+ AVK I K
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDT 65
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
+ REV++L+ L H N++K + ED + YI EL GGEL D I+ +
Sbjct: 66 STILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--------- 115
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R++E DAA +++Q+ H H +VHRD+KPEN L +S ++D +K D
Sbjct: 116 --------KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE 320
FGLS + K +D +G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE 227
Query: 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR----EG 376
I K V K F W +IS+ AKD ++K+L P R+TA Q L HPW++ E
Sbjct: 228 YDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSET 287
Query: 377 GDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGS 435
S++P S + N+RQF +L Q AL +AS L +E L + F +D + +G
Sbjct: 288 PTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGM 347
Query: 436 ISLEEMRQALAKDLPWK-------------LKESRVLEILQAIDCNTDGLVDFSEFVAAT 482
+ +E+ + + + K E ++ ++ +D + G +++SEF+A+
Sbjct: 348 LDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASA 407
Query: 483 LHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEE 536
+ L + R + AF+ FD D G I+ +EL S ++ ++E+
Sbjct: 408 IDRTILLSRE------RMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQ 461
Query: 537 ADIDKDGRISLSEFRRLLRTAS 558
D +KDG + +EF +L+
Sbjct: 462 VDNNKDGEVDFNEFVEMLQNFV 483
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 603 bits (1557), Expect = 0.0
Identities = 159/536 (29%), Positives = 251/536 (46%), Gaps = 63/536 (11%)
Query: 48 KHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHG 107
H H H +N + R++ G Y + LG G
Sbjct: 2 HHHHHHSSGRENLYFQGIAINPGMYVRKKEG--------------KIGESYFKVRKLGSG 47
Query: 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIA----------VEDVKREVKILQALAGHE 157
+G + +K A+K I+K++ E++ E+ +L++L H
Sbjct: 48 AYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHP 106
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N++K ++ FED Y Y+ E EGGEL ++I+ + ++ E DAA
Sbjct: 107 NIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR-----------------HKFDECDAA 149
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+++Q+L H H +VHRD+KPEN L ++ ++K DFGLS F K +D +
Sbjct: 150 NIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL 209
Query: 278 GSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 337
G+AYY+APEVLK+K + DVWS GVI YILLCG PF + + I K+V + K F
Sbjct: 210 GTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFN 269
Query: 338 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG---GDASEIPIDISVLNNMRQ 394
W +IS+ AK+ +K +L D R TA +AL+ W+++ + S+ L+NMR+
Sbjct: 270 DWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRK 329
Query: 395 FVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK------ 447
F +L Q A+ + S L EE +L D F +D + +G + +E+ +
Sbjct: 330 FEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKN 389
Query: 448 -DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEK 506
K E V IL+ +D + +G +++SEF++ + L R + AF
Sbjct: 390 ELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILF------SEERLRRAFNL 443
Query: 507 FDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558
FD D+ G IT EEL GL + + +L EAD +KD I EF ++
Sbjct: 444 FDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC 499
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 599 bits (1547), Expect = 0.0
Identities = 168/531 (31%), Positives = 259/531 (48%), Gaps = 55/531 (10%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGH 106
H H H R Y Q + + G Y K LG
Sbjct: 2 HHHHHHSSGRENLYFQGDLQATPGMFITSKKG--------------HLSEMYQRVKKLGS 47
Query: 107 GQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 166
G +G + DK A+K I K + + + EV +L+ L H N++K Y+ F
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLL-DHPNIMKLYDFF 105
Query: 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
ED Y+ ME +GGEL D I+ + ++ E DAAV+++Q+L
Sbjct: 106 EDKRNYYLVMECYKGGELFDEIIHR-----------------MKFNEVDAAVIIKQVLSG 148
Query: 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 286
H H +VHRD+KPEN L +S ++D+ +K DFGLS + KK ++ +G+AYY+APE
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPE 208
Query: 287 VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 346
VL++K + DVWSIGVI +ILL G PF +T+ I ++V + K F W ++S A
Sbjct: 209 VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGA 268
Query: 347 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE----IPIDISVLNNMRQFVKYSRLK 402
KD +K++L D + R++A QAL HPW++E E +P + + NMR+F +L
Sbjct: 269 KDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLA 328
Query: 403 QFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-------DLPWKLK 454
Q AL +AS L EE +L D F ID + +G + +E+ +K
Sbjct: 329 QAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQI 388
Query: 455 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 514
ES V IL A D + +G +D+SEFV + L D + ++AF+KFD D +G
Sbjct: 389 ESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKD------KLESAFQKFDQDGNGK 442
Query: 515 ITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASISS 561
I+ +EL GL + ++ D + DG + EF ++++ ++
Sbjct: 443 ISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCSNN 493
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 598 bits (1544), Expect = 0.0
Identities = 157/482 (32%), Positives = 242/482 (50%), Gaps = 42/482 (8%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
F RY ++LG G FG + DK G AVK I K ++ E + REV++L+
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
L H N++K Y FED Y Y+ E+ GGEL D I+++ R+
Sbjct: 82 QL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-----------------KRF 123
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+E DAA ++RQ+L H + +VHRD+KPEN L +S +D++++ DFGLS + K
Sbjct: 124 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183
Query: 272 KFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
K +D +G+AYY+APEVL + DVWS GVI YILL G PF E I K+V + K
Sbjct: 184 KMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGK 243
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR---EGGDASEIPIDISV 388
F W +S SAKD ++K+L P R++A AL H W++ + + ++P +
Sbjct: 244 YTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNA 303
Query: 389 LNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK 447
+ N+RQF +L Q AL + S L +E +L F +D + +G + E+ + +
Sbjct: 304 ILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKE 363
Query: 448 DLPW----------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 497
+ E V ++L A+D + +G +++SEFV + L +
Sbjct: 364 LMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRE----- 418
Query: 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRL 553
R + AF FD D G I+ EL G+ + +L E D + DG + EF+++
Sbjct: 419 -RLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQM 477
Query: 554 LR 555
L
Sbjct: 478 LL 479
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 541 bits (1397), Expect = 0.0
Identities = 108/468 (23%), Positives = 195/468 (41%), Gaps = 42/468 (8%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
F Y + + LG G F G A I K+ + ++RE +I +
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICR 65
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
L H N+V+ +++ ++ + Y+ +L GGEL + I+A+ Y
Sbjct: 66 LL-KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-----------------EYY 107
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 270
+E DA+ ++Q+L CH G+VHR++KPEN L S + +++K DFGL+ ++
Sbjct: 108 SEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167
Query: 271 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
+ + G+ Y++PEVL++ G D+W+ GVI YILL G PFWD+ + +++++
Sbjct: 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA 227
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVL 389
DF W +++ AKD + K+L +P R+TAA+AL HPW+ + +
Sbjct: 228 GAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETV 287
Query: 390 NNMRQFVKYSRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK 447
+ +++F +LK L + +T + ++ I+ NG
Sbjct: 288 DCLKKFNARRKLKGAILTVMLATRNFSVRKQEIIKVTEQLIEAISNGDFESYT------- 340
Query: 448 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKF 507
K+ + + N +DF F L + +
Sbjct: 341 ----KMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTIL-----NPHIHL 391
Query: 508 DIDRDGFITPEELRMH---TGLKGSIDPLLEEADIDKDGRISLSEFRR 552
D I + + G+ + +DG+ + F R
Sbjct: 392 MGDESACIAYIRITQYLDAGGIPRTAQSEETRVWHRRDGKWQIVHFHR 439
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 466 bits (1201), Expect = e-162
Identities = 97/345 (28%), Positives = 169/345 (48%), Gaps = 19/345 (5%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPIAVEDVKREVK 148
D F+ Y + +++G G F ++ G + AVK ++ K ++ ED+KRE
Sbjct: 19 DVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
I L H ++V+ + D +Y+ E +G +L I+ +
Sbjct: 79 ICHML-KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKR-------------ADAG 124
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFI 267
Y+E A+ +RQ+L CH + ++HRD+KP L S + + +K FG++
Sbjct: 125 FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ G VG+ +++APEV+KR+ G DVW GVI +ILL G PF+ T++ +F+
Sbjct: 185 ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEG 243
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 386
+++ K + W IS SAKD V+++L+ DP R+T +AL+HPW++E +
Sbjct: 244 IIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLP 303
Query: 387 SVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVD 431
+ +R+F +LK L A++S + D ++ D
Sbjct: 304 ETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSED 348
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 462 bits (1191), Expect = e-161
Identities = 99/371 (26%), Positives = 177/371 (47%), Gaps = 25/371 (6%)
Query: 72 NSRRQTGVIPCGKRTDFGYDK--DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI 129
+ TG G+ ++F + F Y + + LG G F K G A K I
Sbjct: 3 HMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII 62
Query: 130 EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL 189
K+ + ++RE +I + L H N+V+ +++ +++++ Y+ +L GGEL + I+
Sbjct: 63 NTKKLS-ARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV 120
Query: 190 AKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249
A+ Y+E DA+ ++Q+L A CH +G+VHR++KPEN L S
Sbjct: 121 AR-----------------EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 163
Query: 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 308
+ +++K DFGL+ + + + G+ Y++PEVLK+ D+W+ GVI YIL
Sbjct: 164 KAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL 223
Query: 309 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
L G PFWD+ + ++ ++ D+ W +++ AK + +L +P+ R+TA QAL
Sbjct: 224 LVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 283
Query: 369 SHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAI 428
PW+ + ++ +++F +LK L + +T L++L
Sbjct: 284 KVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMIAT---RNLSNLGRNLLNK 340
Query: 429 DVDKNGSISLE 439
S E
Sbjct: 341 KEQGPPSTIKE 351
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 441 bits (1137), Expect = e-154
Identities = 110/295 (37%), Positives = 153/295 (51%), Gaps = 19/295 (6%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
R + + F RY I +LG G FG D+ AVK I K
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDT 65
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
+ REV++L+ L H N++K + ED + YI EL GGEL D I+ +
Sbjct: 66 STILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--------- 115
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
R++E DAA +++Q+ H H +VHRD+KPEN L +S ++D +K D
Sbjct: 116 --------KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE 320
FGLS + K +D +G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE 227
Query: 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
I K V K F W +IS+ AKD ++K+L P R+TA Q L HPW+++
Sbjct: 228 YDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 441 bits (1136), Expect = e-153
Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 27/334 (8%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
K+ +Y I + LG G+FG + + ++ K ++ VK+E+ IL
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----DQVLVKKEISILN 56
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
H N++ + +FE + + E G ++ +RI
Sbjct: 57 IA-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTS----------------AFEL 99
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
E++ V Q+ H H + H D++PEN ++++ + S++K +FG + +KPG
Sbjct: 100 NEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGD 158
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
F+ + + Y APEV + +D+WS+G + Y+LL G PF +T I + ++
Sbjct: 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNA 218
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN 390
+ F + + IS A DFV +LLVK+ ++R+TA++AL HPW+++ + + V+
Sbjct: 219 EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE----RVSTKVIR 274
Query: 391 NMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 424
++ Y L + L + S +R Q
Sbjct: 275 TLKHRRYYHTLIKKDLNMVVSAARISCGGAIRSQ 308
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 439 bits (1132), Expect = e-153
Identities = 92/296 (31%), Positives = 159/296 (53%), Gaps = 17/296 (5%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
R + + D + + LG G FG ++ ++++G +K I K++ + +
Sbjct: 7 HSSGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPM 64
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
E ++ E+++L++L H N++K + FED + +YI ME CEGGELL+RI++
Sbjct: 65 EQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQ-------- 115
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
+ +E A +++QM+ A H +VH+D+KPEN LF+ S +K D
Sbjct: 116 -----ARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIID 170
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE 320
FGL++ K + + G+A Y+APEV KR + D+WS GV+ Y LL G PF +
Sbjct: 171 FGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL 230
Query: 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376
+ + ++ +P++ + P ++ A D +K++L KDP R +AAQ L H W ++
Sbjct: 231 EEVQQKATYKEPNYAVECRP-LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 437 bits (1125), Expect = e-152
Identities = 107/292 (36%), Positives = 162/292 (55%), Gaps = 21/292 (7%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++ YT+ +G G +G +A K R A KKI K + V+ K+E++I+++
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKS 62
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
L H N+++ Y FED+ +Y+ MELC GGEL +R++ K +
Sbjct: 63 L-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK-----------------RVFR 104
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E DAA +++ +L A CH + HRD+KPENFLF + DS LK DFGL+ KPGK
Sbjct: 105 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164
Query: 273 FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ VG+ YYV+P+VL+ GPE D WS GV+ Y+LLCG PF T+ + ++
Sbjct: 165 MRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTF 224
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
F K W ++S A+ +++LL K P+ R+T+ QAL H W + +S +
Sbjct: 225 TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 276
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 435 bits (1121), Expect = e-150
Identities = 116/370 (31%), Positives = 175/370 (47%), Gaps = 29/370 (7%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDK--DFDRRYTIGKLL 104
H H H + L + + G + + L
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESEL 61
Query: 105 GHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYN 164
G G Y K A+K ++K + V+ E+ +L L+ H N++K
Sbjct: 62 GRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKE 115
Query: 165 AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQML 224
FE + + +EL GGEL DRI+ K Y+E+DAA V+Q+L
Sbjct: 116 IFETPTEISLVLELVTGGELFDRIVEK-----------------GYYSERDAADAVKQIL 158
Query: 225 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 284
A H +G+VHRD+KPEN L+ + D+ LK DFGLS ++ + + G+ Y A
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCA 218
Query: 285 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSI 342
PE+L+ + GPE D+WS+G+ITYILLCG PF+D+ D +F+ +L + F W +
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEV 278
Query: 343 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLK 402
S +AKD V+KL+V DP+ RLT QAL HPWV G A+ + +++F +LK
Sbjct: 279 SLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT--GKAANFVHMDTAQKKLQEFNARRKLK 336
Query: 403 QFALRALAST 412
+AS+
Sbjct: 337 AAVKAVVASS 346
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 431 bits (1109), Expect = e-148
Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 33/399 (8%)
Query: 38 NHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRR 97
N ++ + +Q + D
Sbjct: 4 NSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDY 63
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
++LG G G +K ++ A+K ++ +REV++ +
Sbjct: 64 KVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCP 115
Query: 158 NVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
++V+ + +E+ + I ME +GGEL RI R D +TE
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTE 160
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
++A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 161 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 220
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVL 328
+ YYVAPEVL + D+WS+GVI YILLCG PF+ G+ +
Sbjct: 221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 280
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISV 388
+ +F W +S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 281 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSR 340
Query: 389 LNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 427
+ + ++ +K+ ALA+ D E ++ DA
Sbjct: 341 VLKEDKE-RWEDVKEEMTSALATMRVDYEQIKIKKIEDA 378
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 428 bits (1102), Expect = e-147
Identities = 99/380 (26%), Positives = 170/380 (44%), Gaps = 32/380 (8%)
Query: 6 STTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKT 65
SG ++ N R R A + Q ++L
Sbjct: 4 HHHHSSGVDNKFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLND 63
Query: 66 KQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVA 125
Q + T + + P + D+ K+F ++Y ++G G +A G A
Sbjct: 64 AQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFA 123
Query: 126 VKKIEKNKMILPI-----AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
VK +E L E +RE IL+ +AGH +++ +++E +++++ +L
Sbjct: 124 VKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMR 183
Query: 181 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 240
GEL D + K +EK+ ++R +L + H + +VHRD+
Sbjct: 184 KGELFDYLTEK-----------------VALSEKETRSIMRSLLEAVSFLHANNIVHRDL 226
Query: 241 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-------G 293
KPEN L ++ ++ +DFG S ++PG+K +++ G+ Y+APE+LK G
Sbjct: 227 KPENILLD---DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYG 283
Query: 294 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 353
E D+W+ GVI + LL G PFW + + + + ++ + F W S++ KD + +L
Sbjct: 284 KEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRL 343
Query: 354 LVKDPRARLTAAQALSHPWV 373
L DP ARLTA QAL HP+
Sbjct: 344 LQVDPEARLTAEQALQHPFF 363
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 425 bits (1094), Expect = e-146
Identities = 107/348 (30%), Positives = 170/348 (48%), Gaps = 33/348 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI---LPIAVEDVKREV 147
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
IL+ + H NV+ + +E+ V + +EL GGEL D + K
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---------------- 108
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS-LKATDFGLSDF 266
TE++A ++Q+L H + H D+KPEN + +K DFGL+
Sbjct: 109 -ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325
I G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 385
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 228 NVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ------ 281
Query: 386 ISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKN 433
L+ V + K+FA R ++ L D F+A ++ +
Sbjct: 282 -QALSRKASAVNMEKFKKFAARKKSNNG---SGGGLNDIFEAQKIEWH 325
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 417 bits (1075), Expect = e-144
Identities = 78/317 (24%), Positives = 145/317 (45%), Gaps = 19/317 (5%)
Query: 92 KDFDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
++F+ Y + K LG G+F K+ G A K ++K + ++ E+ +L
Sbjct: 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-QDCRAEILHEIAVL 82
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+ V+ + +E+ + + + +E GGE+ L +
Sbjct: 83 ELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPE---------------LAEM 127
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
+E D +++Q+L H + +VH D+KP+N L S +K DFG+S I
Sbjct: 128 VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187
Query: 271 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
+ ++I+G+ Y+APE+L +D+W+IG+I Y+LL PF + + + +
Sbjct: 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ 247
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI-PIDISV 388
D+ + + S+S A DF++ LLVK+P R TA LSH W+++ + P + S
Sbjct: 248 VNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSS 307
Query: 389 LNNMRQFVKYSRLKQFA 405
+ + S + +
Sbjct: 308 SSQTQDHSVRSSEDKTS 324
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 416 bits (1071), Expect = e-144
Identities = 90/299 (30%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
F Y + + LG G F K G A K I K+ + ++RE +I +
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICR 60
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
L H N+V+ +++ +++++ Y+ +L GGEL + I+A+ Y
Sbjct: 61 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----------------EFY 102
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+E DA+ ++Q+L A CH +G+VHR++KPEN L S + +++K DFGL+ + +
Sbjct: 103 SEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
+ G+ Y++PEVLK+ D+W+ GVI YILL G PFWD+ + ++ ++
Sbjct: 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 222
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD-ASEIPIDISV 388
D+ W +++ AK + +L +P+ R+TA QAL PW+ AS I +V
Sbjct: 223 AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTV 281
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 409 bits (1052), Expect = e-140
Identities = 98/338 (28%), Positives = 154/338 (45%), Gaps = 38/338 (11%)
Query: 93 DFDRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
Y + K +LG G G + G + A+K + + ++EV
Sbjct: 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------KARQEVDHHW 76
Query: 152 ALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
+G ++V + +E+ + I ME EGGEL RI R
Sbjct: 77 QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQE---------------RG 121
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
D +TE++AA ++R + H H + HRD+KPEN L+ S ++D+ LK TDFG +
Sbjct: 122 DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE----DG 322
Q + YYVAPEVL + D+WS+GVI YILLCG PF+ T G
Sbjct: 182 TQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 240
Query: 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
+ + + + F W +S AK ++ LL DP RLT Q ++HPW+ + +
Sbjct: 241 MKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQT 300
Query: 383 PIDIS-VLNNMRQFVKYSRLKQFALRALAS-TLDDEEL 418
P+ + VL + +K+ ALA+ +D +++
Sbjct: 301 PLHTARVLQEDKDHWD--EVKEEMTSALATMRVDYDQV 336
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 407 bits (1047), Expect = e-140
Identities = 89/319 (27%), Positives = 145/319 (45%), Gaps = 38/319 (11%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
+P T F Y ++LG G K AVK I+
Sbjct: 4 AALPGSHST-----HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSF 58
Query: 138 IAV------EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK 191
A E +EV IL+ ++GH N+++ + +E + + ++ +L + GEL D + K
Sbjct: 59 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK 118
Query: 192 MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251
+EK+ ++R +L V H +VHRD+KPEN L
Sbjct: 119 -----------------VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD--- 158
Query: 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVI 304
+D ++K TDFG S + PG+K +++ G+ Y+APE+++ G E D+WS GVI
Sbjct: 159 DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 218
Query: 305 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 364
Y LL G PFW + + + + ++ F W S++ KD V + LV P+ R TA
Sbjct: 219 MYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA 278
Query: 365 AQALSHPWVREGGDASEIP 383
+AL+HP+ ++
Sbjct: 279 EEALAHPFFQQYVVEEVRH 297
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 411 bits (1057), Expect = e-137
Identities = 104/433 (24%), Positives = 179/433 (41%), Gaps = 30/433 (6%)
Query: 42 RNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIG 101
D + + + + K ++ + Y I
Sbjct: 103 PGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIH 162
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+ LG G FG + T++A G+ A K + E V++E++ + L H +V
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLR-HPTLVN 218
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
++AFEDDN + + E GGEL +++ + ++ +E +A +R
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADE----------------HNKMSEDEAVEYMR 262
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
Q+ + H + VH D+KPEN +F + K + LK DFGL+ + P + + G+A
Sbjct: 263 QVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 321
Query: 282 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
+ APEV + K G +D+WS+GV++YILL G PF + +D + V + +
Sbjct: 322 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 381
Query: 341 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG-GDASEIPIDISVLNNMRQFVKYS 399
IS KDF++KLL+ DP R+T QAL HPW+ G + I S +R +K
Sbjct: 382 GISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIK-- 439
Query: 400 RLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL 459
L +++ + + + + +A + + K + V
Sbjct: 440 TKYDAWPEPLPPL---GRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIV-KPYGTEVG 495
Query: 460 EILQA-IDCNTDG 471
E A C
Sbjct: 496 EGQSANFYCRVIA 508
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 399 bits (1028), Expect = e-137
Identities = 90/342 (26%), Positives = 151/342 (44%), Gaps = 45/342 (13%)
Query: 91 DKDFDRRYTIG---KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
D F + Y + K LG G F K + AVK I K + ++E+
Sbjct: 3 DSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME------ANTQKEI 56
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
L+ GH N+VK + F D + ++ MEL GGEL +RI K
Sbjct: 57 TALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK---------------- 100
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
++E +A+ ++R+++ + H G+VHRD+KPEN LF ++ +K DFG +
Sbjct: 101 -KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159
Query: 268 KP-GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED---- 321
P + + + +Y APE+L + D+WS+GVI Y +L G+ PF
Sbjct: 160 PPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCT 219
Query: 322 ---GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378
I K++ + F + W ++S AKD ++ LL DP RL + + W+++G
Sbjct: 220 SAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ 279
Query: 379 ASEIPI---------DISVLNNMR-QFVKYSRLKQFALRALA 410
S P+ +V ++ F +++ K+
Sbjct: 280 LSSNPLMTPDILGSSGAAVHTCVKATFHAFNKYKREGFCLQN 321
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 399 bits (1027), Expect = e-136
Identities = 106/369 (28%), Positives = 174/369 (47%), Gaps = 27/369 (7%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI---LPIAVEDVKREV 147
+ + Y IG+ LG GQF +K+ G A K I+K + + E+++REV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREV 66
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
IL+ + H N++ ++ +E+ V + +EL GGEL D + K
Sbjct: 67 SILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK---------------- 109
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS-LKATDFGLSDF 266
+E++A ++Q+L H + H D+KPEN + +K DFGL+
Sbjct: 110 -ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325
I+ G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI--P 383
+ DF + + S AKDF++KLLVK+ R RLT +AL HPW+ +
Sbjct: 229 NITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRR 288
Query: 384 IDISVLNNMRQFVKYSRLKQ-FALRALASTLDDEELA-DLRDQFDAIDVDKNGSISLEEM 441
+ L N ++ R K F++ +L + L + + + ++ +
Sbjct: 289 ESVVNLENFKKQYVRRRWKLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTEENIAR 348
Query: 442 RQALAKDLP 450
R+AL
Sbjct: 349 RKALHPRRR 357
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 394 bits (1015), Expect = e-135
Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 23/298 (7%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI---LPIAVEDVKREVKI 149
+ Y +G+ LG GQF K G A K I+K ++ ++ E+++REV I
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
L+ + H N++ ++ FE+ V + +EL GGEL D + K
Sbjct: 62 LREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-----------------E 103
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS-AKEDSSLKATDFGLSDFIK 268
TE +A ++Q+L H + H D+KPEN + + +K DFG++ I+
Sbjct: 104 SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF +T+ +
Sbjct: 164 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI 223
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 385
DF + + + S AKDF+++LLVKDP+ R+T AQ+L H W++ + D
Sbjct: 224 SAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGED 281
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 397 bits (1021), Expect = e-135
Identities = 105/391 (26%), Positives = 166/391 (42%), Gaps = 27/391 (6%)
Query: 48 KHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIP-CGKRTDFGYDKDFDRRYTIGKLLGH 106
+ H H + + + + Y I + LG
Sbjct: 2 RGSHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGS 61
Query: 107 GQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 166
G FG + +KA G K I P+ VK E+ I+ L H ++ ++AF
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLH-HPKLINLHDAF 117
Query: 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
ED + + +E GGEL DRI +D + +E + +RQ
Sbjct: 118 EDKYEMVLILEFLSGGELFDRI----------------AAEDYKMSEAEVINYMRQACEG 161
Query: 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 286
H H +VH D+KPEN + ++ K+ SS+K DFGL+ + P + + +A + APE
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPE 220
Query: 287 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 345
++ R+ G +D+W+IGV+ Y+LL G PF + + + V R +F + S+S
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE 280
Query: 346 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQF- 404
AKDF+K LL K+PR RLT AL HPW++ I S N +RQ +K
Sbjct: 281 AKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPA 340
Query: 405 ---ALRALASTLDDEELADLRDQFDAIDVDK 432
A+ +A+ + Q D+
Sbjct: 341 PQPAIGRIANFSSLRKHRPQEYQIYDSYFDR 371
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 392 bits (1009), Expect = e-134
Identities = 102/329 (31%), Positives = 162/329 (49%), Gaps = 26/329 (7%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI---LPIAVEDVKREV 147
+ + Y IG+ LG GQF +K+ G A K I+K + ++ E+++REV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
IL+ + H NV+ ++ +E+ V + +EL GGEL D + K
Sbjct: 67 SILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---------------- 109
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS-LKATDFGLSDF 266
+E++A ++Q+L H + H D+KPEN + +K DFGL+
Sbjct: 110 -ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325
I+ G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI--P 383
+ DF + + S AKDF++KLLVK+ R RLT +AL HPW+ + +
Sbjct: 229 NITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRR 288
Query: 384 IDISVLNNMRQFVKYSRLKQFALRALAST 412
+ L N R+ R K + ++
Sbjct: 289 ESVVNLENFRKQYVRRRWKL-SFSIVSLC 316
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 389 bits (1002), Expect = e-133
Identities = 79/329 (24%), Positives = 140/329 (42%), Gaps = 52/329 (15%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
+ D ++LG G G +K ++ A+K ++ +REV++
Sbjct: 13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELH 64
Query: 151 QALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ ++V+ + +E+ + I ME +GGEL RI R
Sbjct: 65 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------R 109
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
D +TE++A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG
Sbjct: 110 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF--- 166
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDK----TEDG 322
A E K D+WS+GVI YILLCG PF+ G
Sbjct: 167 -----------------AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG 209
Query: 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
+ + + +F W +S K ++ LL +P R+T + ++HPW+ + +
Sbjct: 210 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 269
Query: 383 PIDISVLNNMRQFVKYSRLKQFALRALAS 411
P+ S + + ++ +K+ ALA+
Sbjct: 270 PLHTSRVLKEDKE-RWEDVKEEMTSALAT 297
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 391 bits (1007), Expect = e-133
Identities = 103/391 (26%), Positives = 179/391 (45%), Gaps = 34/391 (8%)
Query: 20 NNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGV 79
++ +HH + + + +N + H E + + + S+R + +
Sbjct: 3 HHHHHHSSGVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSAL 62
Query: 80 I--------PCGKRTDFGYDKDFDRRYTIGKL--LGHGQFGYTYVATDKANGDRVAVKKI 129
P R + YT+ K LG G+FG + + A G ++A K I
Sbjct: 63 AVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKII 122
Query: 130 EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL 189
+ M E+VK E+ ++ L H N+++ Y+AFE N + + ME +GGEL DRI
Sbjct: 123 KTRGMKD---KEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRI- 177
Query: 190 AKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249
I + TE D + ++Q+ H ++H D+KPEN L +
Sbjct: 178 ---------------IDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN 222
Query: 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 308
++ +K DFGL+ KP +K + G+ ++APEV+ +D+WS+GVI Y+L
Sbjct: 223 -RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYML 281
Query: 309 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
L G PF + +L + D + + IS AK+F+ KLL+K+ R++A++AL
Sbjct: 282 LSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEAL 341
Query: 369 SHPWVREGGDASEIPIDI--SVLNNMRQFVK 397
HPW+ + S + + ++ + FV
Sbjct: 342 KHPWLSDHKLHSRLSAQKKKNRGSDAQDFVT 372
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 387 bits (997), Expect = e-132
Identities = 101/326 (30%), Positives = 146/326 (44%), Gaps = 52/326 (15%)
Query: 90 YDKDFDRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
+ F+ Y + + +LG G + AVK IEK V REV+
Sbjct: 6 FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH---IRSRVFREVE 62
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
+L GH NV++ FE+++ Y+ E GG +L I +
Sbjct: 63 MLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR----------------- 105
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ E +A+VVV+ + H G+ HRD+KPEN L + + S +K DF L IK
Sbjct: 106 RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165
Query: 269 PGKKFQDI--------VGSAYYVAPEVLKRKS------GPESDVWSIGVITYILLCGRRP 314
I GSA Y+APEV++ S D+WS+GVI YILL G P
Sbjct: 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
Query: 315 FWDK---------------TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 359
F + ++ +F+ + K +F K W IS +AKD + KLLV+D +
Sbjct: 226 FVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAK 285
Query: 360 ARLTAAQALSHPWVREGGDASEIPID 385
RL+AAQ L HPWV+ G A E +
Sbjct: 286 QRLSAAQVLQHPWVQ--GCAPENTLP 309
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 381 bits (981), Expect = e-129
Identities = 93/335 (27%), Positives = 153/335 (45%), Gaps = 36/335 (10%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
F Y + + +G G + KA AVK I+K+K D E++IL
Sbjct: 17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEIL 69
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H N++ + ++D YVY+ EL +GGELLD+IL +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ-----------------KF 112
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED-SSLKATDFGLSDFIKP 269
++E++A+ V+ + + H G+VHRD+KP N L+ + S++ DFG + ++
Sbjct: 113 FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
Query: 270 -GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW---DKTEDGIF 324
+A +VAPEVL+R+ D+WS+GV+ Y +L G PF D T + I
Sbjct: 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232
Query: 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
+ K W S+S++AKD V K+L DP RLTAA L HPW+ + +
Sbjct: 233 ARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQL 292
Query: 385 DISVLNNMRQ------FVKYSRLKQFALRALASTL 413
+ ++ + + +R + L + +
Sbjct: 293 NRQDAPHLVKGAMAATYSALNRNQSPVLEPVGRST 327
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 379 bits (976), Expect = e-129
Identities = 105/338 (31%), Positives = 161/338 (47%), Gaps = 35/338 (10%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-----VEDVK 144
Y K Y + K LG G G +A ++ +VA+K I K K + A +V+
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++
Sbjct: 64 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGN------------- 108
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
R E + QML H +G++HRD+KPEN L S +ED +K TDFG S
Sbjct: 109 ----KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWD-KT 319
+ + + G+ Y+APEVL D WS+GVI +I L G PF + +T
Sbjct: 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379
+ + ++ K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 225 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE--- 281
Query: 380 SEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEE 417
+ + + + + + L Q + S E
Sbjct: 282 ---DMKRKFQDLLSEENESTALPQVLAQPSTSRKRPRE 316
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 380 bits (977), Expect = e-129
Identities = 98/347 (28%), Positives = 149/347 (42%), Gaps = 41/347 (11%)
Query: 68 HQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVK 127
H +S R+ G + ++Y + +G G +G VA + A+K
Sbjct: 4 HHHHSSGRENLYFQGGSL------LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIK 57
Query: 128 KIEKNKMIL--PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 185
+ KNK+ P VE +K EV++++ L H N+ + Y +ED+ Y+ + MELC GG LL
Sbjct: 58 IMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLL 116
Query: 186 DRILAK-----------------------MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
D++ S D EK + ++RQ
Sbjct: 117 DKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQ 176
Query: 223 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIV 277
+ H G+ HRD+KPENFLF + + +K DFGLS
Sbjct: 177 IFSALHYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA 235
Query: 278 GSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
G+ Y+VAPEVL GP+ D WS GV+ ++LL G PF + +VL K F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ +S A+D + LL ++ R A +AL HPW+ + D
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIY 342
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 358 bits (920), Expect = e-119
Identities = 99/303 (32%), Positives = 150/303 (49%), Gaps = 29/303 (9%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-----PIAVEDVK 144
Y K Y + K LG G G +A ++ +VA++ I K K + +V+
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 188
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++
Sbjct: 189 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGN------------- 233
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
R E + QML H +G++HRD+KPEN L S +ED +K TDFG S
Sbjct: 234 ----KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWD-KT 319
+ + + G+ Y+APEVL D WS+GVI +I L G PF + +T
Sbjct: 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349
Query: 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379
+ + ++ K +F + W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 350 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 409
Query: 380 SEI 382
+
Sbjct: 410 RKF 412
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 344 bits (885), Expect = e-114
Identities = 87/442 (19%), Positives = 160/442 (36%), Gaps = 52/442 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ +LGHG G T V + VAVK+I REV++L+ H
Sbjct: 25 SFCPKDVLGHGAEG-TIVYRGMFDNRDVAVKRILPECF------SFADREVQLLRESDEH 77
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
NV++++ +D + YIA+ELC L + + +KD + +
Sbjct: 78 PNVIRYFCTEKDRQFQYIAIELC-AATLQEYVE----------------QKDFAHLGLEP 120
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA--TDFGLSDFIKPGK--- 271
+++Q A H +VHRD+KP N L +KA +DFGL + G+
Sbjct: 121 ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180
Query: 272 -KFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ + G+ ++APE+L D++S G + Y ++ + K+
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI 240
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 386
+L P A++ ++K++ DP+ R +A L HP+ + D+
Sbjct: 241 LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDV 300
Query: 387 SVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA 446
S ++ L ++ L D R+ +
Sbjct: 301 S------DRIEKESLDGPIVKQLERGGRAVVKMDWRENITVPLQTDLR--KFRTYKGGSV 352
Query: 447 KDLPWKLKESR------VLEILQAIDCNTDGLVDF--SEFVAATLHVHQLEEHDSEKWHL 498
+DL ++ + E+ + + D V + S F H ++ E
Sbjct: 353 RDLLRAMRNKKHHYRELPAEVRETLGTLPDDFVCYFTSRFPHLLAHTYRAMEL--CSHER 410
Query: 499 RSQAAFEKFDIDRDGFITPEEL 520
Q + + +TP+ L
Sbjct: 411 LFQPYYFHEPPEPQPPVTPDAL 432
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 317 bits (814), Expect = e-103
Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 45/324 (13%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
+++ K+LG+G G T V G VAVK++ + + E+K+
Sbjct: 9 FEQSLKNLVVSEKILGYGSSG-TVVFQGSFQGRPVAVKRMLIDFC------DIALMEIKL 61
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
L H NV+++Y + D ++YIA+ELC L D + +K +S
Sbjct: 62 LTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSD----------ENLK 110
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK----------EDSSLKAT 259
E + ++RQ+ A H ++HRD+KP+N L ++ E+ + +
Sbjct: 111 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170
Query: 260 DFGLSDFIKPGK-----KFQDIVGSAYYVAPEVL--------KRKSGPESDVWSIGVITY 306
DFGL + G+ + G++ + APE+L KR+ D++S+G + Y
Sbjct: 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 307 ILLC-GRRPFWDK--TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 363
+L G+ PF DK E I + + + + + S+ A D + +++ DP R T
Sbjct: 231 YILSKGKHPFGDKYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPT 289
Query: 364 AAQALSHPWVREGGDASEIPIDIS 387
A + L HP E + +S
Sbjct: 290 AMKVLRHPLFWPKSKKLEFLLKVS 313
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 258 bits (661), Expect = 7e-82
Identities = 64/318 (20%), Positives = 111/318 (34%), Gaps = 54/318 (16%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+ + + +LG G + K GD A+K + P V+ RE ++L+
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLK 62
Query: 152 ALAGHENVVKFYNAFEDDN--YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
L H+N+VK + E+ + + ME C G L +
Sbjct: 63 KLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP--------------SNAY 107
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLSDFIK 268
E + +V+R ++ +G+VHR++KP N + + S K TDFG + ++
Sbjct: 108 GLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKS---------GPESDVWSIGVITYILLCGRRPFWDKT 319
++F + G+ Y+ P++ +R G D+WSIGV Y G PF
Sbjct: 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
Query: 320 EDGIFKEVLRN---------------------KPDFRRKPWPSISNSAKD----FVKKLL 354
KEV+ S+S + + +L
Sbjct: 228 GPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANIL 287
Query: 355 VKDPRARLTAAQALSHPW 372
D Q +
Sbjct: 288 EADQEKCWGFDQFFAETS 305
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 257 bits (659), Expect = 7e-82
Identities = 88/298 (29%), Positives = 145/298 (48%), Gaps = 29/298 (9%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
D RRY G+ LG G F + +D + A K + K+ ++ P E + E+ I
Sbjct: 9 VDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISI 68
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
++LA H++VV F+ FED+++V++ +ELC LL+ +
Sbjct: 69 HRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR-----------------K 110
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK- 268
TE +A +RQ++ H + ++HRD+K N ED +K DFGL+ ++
Sbjct: 111 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEY 167
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
G++ + + G+ Y+APEVL +K E DVWSIG I Y LL G+ PF + +
Sbjct: 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 227
Query: 328 LRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
+N ++ P I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 228 KKN--EYS---IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 280
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 258 bits (662), Expect = 7e-82
Identities = 90/324 (27%), Positives = 149/324 (45%), Gaps = 29/324 (8%)
Query: 64 KTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR 123
K P + + D RRY G+ LG G F + +D +
Sbjct: 9 KAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEV 68
Query: 124 VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 183
A K + K+ ++ P E + E+ I ++LA H++VV F+ FED+++V++ +ELC
Sbjct: 69 FAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRS 127
Query: 184 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 243
LL+ + TE +A +RQ++ H + ++HRD+K
Sbjct: 128 LLELHKRR-----------------KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLG 170
Query: 244 NFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSI 301
N ED +K DFGL+ ++ G++ + + G+ Y+APEVL +K E DVWSI
Sbjct: 171 NLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 227
Query: 302 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRA 360
G I Y LL G+ PF + + +N ++ P I+ A ++K+L DP A
Sbjct: 228 GCIMYTLLVGKPPFETSCLKETYLRIKKN--EYS---IPKHINPVAASLIQKMLQTDPTA 282
Query: 361 RLTAAQALSHPWVREGGDASEIPI 384
R T + L+ + G + +PI
Sbjct: 283 RPTINELLNDEFFTSGYIPARLPI 306
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 256 bits (657), Expect = 2e-81
Identities = 74/321 (23%), Positives = 129/321 (40%), Gaps = 45/321 (14%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK 131
+ +GV + F R Y+I K +G G + ++ A+K +
Sbjct: 4 HHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNL 62
Query: 132 NKMILPIAVEDVKREVKILQALAGH-ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA 190
+ ++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L +
Sbjct: 63 EEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL-- 118
Query: 191 KMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250
+K + + ML H HG+VH D+KP NFL
Sbjct: 119 ---------------KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-- 161
Query: 251 KEDSSLKATDFGLSDFIKPGKKFQD---IVGSAYYVAPEVLKRKS------------GPE 295
D LK DFG+++ ++P VG+ Y+ PE +K S P+
Sbjct: 162 --DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 219
Query: 296 SDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 353
SDVWS+G I Y + G+ PF + + P+ + +D +K
Sbjct: 220 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAII---DPNHEIEFPDIPEKDLQDVLKCC 276
Query: 354 LVKDPRARLTAAQALSHPWVR 374
L +DP+ R++ + L+HP+V+
Sbjct: 277 LKRDPKQRISIPELLAHPYVQ 297
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 252 bits (646), Expect = 4e-80
Identities = 90/282 (31%), Positives = 140/282 (49%), Gaps = 26/282 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ +G LLG G F Y A G VA+K I+K M V+ V+ EVKI L H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-H 70
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
++++ YN FED NYVY+ +E+C GE+ + + ++E +A
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYL----------------KNRVKPFSENEA 114
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQD 275
+ Q++ H HG++HRD+ N L +K DFGL+ +K P +K
Sbjct: 115 RHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYT 171
Query: 276 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
+ G+ Y++PE+ R + G ESDVWS+G + Y LL GR PF T +V+ D+
Sbjct: 172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DY 229
Query: 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376
+ +S AKD + +LL ++P RL+ + L HP++
Sbjct: 230 EMPSF--LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 253 bits (647), Expect = 2e-79
Identities = 76/354 (21%), Positives = 135/354 (38%), Gaps = 52/354 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R Y+I K +G G + ++ A+K + + ++ + E+ L L
Sbjct: 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQ 65
Query: 155 GH-ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H + +++ Y+ D Y+Y+ ME C +L + +K
Sbjct: 66 QHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL-----------------KKKKSIDP 107
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+ + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 108 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTS 163
Query: 274 QD---IVGSAYYVAPEVLKRKS------------GPESDVWSIGVITYILLCGRRPFWDK 318
VG+ Y+ PE +K S P+SDVWS+G I Y + G+ PF
Sbjct: 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 223
Query: 319 TE--DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376
+ + P+ + +D +K L +DP+ R++ + L+HP+V+
Sbjct: 224 INQISKLHAII---DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 280
Query: 377 GDASEIPIDIS------VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 424
+ VL + + + + A + L E +
Sbjct: 281 THPVNQMAKGTTEEMKYVLGQLVGLNSPNSILK-AAKTLYEHYSGGESHNSSSS 333
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 249 bits (639), Expect = 9e-79
Identities = 69/314 (21%), Positives = 120/314 (38%), Gaps = 58/314 (18%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
+ + +LG G FG A + + A+KKI + + + EV +L +L
Sbjct: 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE----KLSTILSEVMLLASL 59
Query: 154 AGHENVVKFYNAFEDDN-------------YVYIAMELCEGGELLDRILAKMISTTLTSA 200
H+ VV++Y A+ + ++I ME CE G L D I
Sbjct: 60 N-HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI------------ 106
Query: 201 WFLAIRKDSRYTEKD-AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ ++D + RQ+L + H G++HRD+KP N E ++K
Sbjct: 107 -----HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID---ESRNVKIG 158
Query: 260 DFGLS---------------DFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIG 302
DFGL+ + +G+A YVA EVL + D++S+G
Sbjct: 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLG 218
Query: 303 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 362
+I + ++ I K++ +F + K ++ L+ DP R
Sbjct: 219 IIFFEMIYP--FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276
Query: 363 TAAQALSHPWVREG 376
A L+ W+
Sbjct: 277 GARTLLNSGWLPVK 290
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 251 bits (643), Expect = 2e-78
Identities = 84/422 (19%), Positives = 146/422 (34%), Gaps = 64/422 (15%)
Query: 25 HRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGK 84
H + + + K + QH + K N
Sbjct: 1 HHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVK------ 54
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK 144
R Y+I K +G G + ++ A+K + + ++ +
Sbjct: 55 ----------GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEAD-NQTLDSYR 102
Query: 145 REVKILQALAGH-ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL 203
E+ L L H + +++ Y+ D Y+Y+ ME C +L +
Sbjct: 103 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--------------- 146
Query: 204 AIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
+K + + ML H HG+VH D+KP NFL D LK DFG+
Sbjct: 147 --KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGI 200
Query: 264 SDFIKPGKKFQD---IVGSAYYVAPEVLKRKS------------GPESDVWSIGVITYIL 308
++ ++P VG+ Y+ PE +K S P+SDVWS+G I Y +
Sbjct: 201 ANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 260
Query: 309 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
G+ PF I K P+ + +D +K L +DP+ R++ + L
Sbjct: 261 TYGKTPFQQIINQ-ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
Query: 369 SHPWVREGGDASEIPIDIS------VLNNMRQFVKYSRLKQFALRALASTLDDEELADLR 422
+HP+V+ + VL + + + + A + L E +
Sbjct: 320 AHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILK-AAKTLYEHYSGGESHNSS 378
Query: 423 DQ 424
Sbjct: 379 SS 380
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 244 bits (625), Expect = 5e-77
Identities = 78/281 (27%), Positives = 134/281 (47%), Gaps = 27/281 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I L H
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-H 68
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+++ Y F D VY+ +E G + ++K S++ E+
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRE-----------------LQKLSKFDEQRT 111
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
A + ++ + CH ++HRD+KPEN L LK DFG S P + D+
Sbjct: 112 ATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTDL 167
Query: 277 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ Y+ PE+++ + + D+WS+GV+ Y L G+ PF T +K + R + F
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF- 226
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376
P ++ A+D + +LL +P R + L HPW+
Sbjct: 227 --P-DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 245 bits (626), Expect = 9e-76
Identities = 64/318 (20%), Positives = 111/318 (34%), Gaps = 54/318 (16%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+ + + +LG G + K GD A+K + P V+ RE ++L+
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLK 62
Query: 152 ALAGHENVVKFYNAFEDDN--YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
L H+N+VK + E+ + + ME C G L +
Sbjct: 63 KLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP--------------SNAY 107
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLSDFIK 268
E + +V+R ++ +G+VHR++KP N + + S K TDFG + ++
Sbjct: 108 GLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKS---------GPESDVWSIGVITYILLCGRRPFWDKT 319
++F + G+ Y+ P++ +R G D+WSIGV Y G PF
Sbjct: 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
Query: 320 EDGIFKEVLRNKP---------------------DFRRKPWPSISNSAKD----FVKKLL 354
KEV+ S+S + + +L
Sbjct: 228 GPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANIL 287
Query: 355 VKDPRARLTAAQALSHPW 372
D Q +
Sbjct: 288 EADQEKCWGFDQFFAETS 305
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 241 bits (617), Expect = 8e-75
Identities = 54/373 (14%), Positives = 95/373 (25%), Gaps = 51/373 (13%)
Query: 38 NHHARNDTTHKHQHQHQERAKNYQQLK-TKQHQKTNSRRQTGVIPCGKRTDFGYD-KDFD 95
+H D+ + + +E Y + + K+ V P T +
Sbjct: 2 SHMEAGDSFMRDLLKREEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGE 61
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL-- 153
R+ + + L G ++ D + A+K +E + L
Sbjct: 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG 121
Query: 154 ---------------------AGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILA 190
+ +D + M +L
Sbjct: 122 ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASV-DLEL---- 176
Query: 191 KMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250
L S ++ Q++R+AA GLVH P+N
Sbjct: 177 ------LFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM-- 228
Query: 251 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYI 307
D L D K G + Y E L + + W +G+ Y
Sbjct: 229 -PDGRLMLGDVSAL--WKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYR 285
Query: 308 LLCGRRPFWDKTEDGIFKEVL-----RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 362
+ C PF T + + K + + L D R RL
Sbjct: 286 VWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRL 345
Query: 363 TAAQALSHPWVRE 375
+A+ P +
Sbjct: 346 LPLEAMETPEFLQ 358
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 238 bits (609), Expect = 1e-74
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 27/293 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ IG+ LG G+FG Y+A +K N +A+K + K+++ ++RE++I L H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-H 73
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+++ YN F D +Y+ +E GEL ++K R+ E+ +
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKE-----------------LQKHGRFDEQRS 116
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
A + ++ CH ++HRD+KPEN L LK DFG S P + + +
Sbjct: 117 ATFMEELADALHYCHERKVIHRDIKPENLLM---GYKGELKIADFGWS-VHAPSLRRRTM 172
Query: 277 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ Y+ PE+++ K+ + D+W GV+ Y L G PF + + ++ D +
Sbjct: 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--DLK 230
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISV 388
P+ +S+ +KD + KLL P RL + HPWV+ P+ S
Sbjct: 231 FPPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQST 281
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 237 bits (608), Expect = 2e-74
Identities = 88/282 (31%), Positives = 130/282 (46%), Gaps = 27/282 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y +G LG G FG + + G +VAVK + + K+ V +KRE++ L+ H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-H 70
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+++K Y ++ ME GGEL D I R E +A
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-----------------GRVEEMEA 113
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +Q+L CH H +VHRD+KPEN L + K DFGLS+ + G+ +
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTS 170
Query: 277 VGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
GS Y APEV+ + +GPE D+WS GVI Y LLCG PF D+ +FK++ F
Sbjct: 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VF 228
Query: 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376
+ ++ S + +L DP R T H W ++
Sbjct: 229 YIPEY--LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 237 bits (607), Expect = 2e-74
Identities = 82/286 (28%), Positives = 131/286 (45%), Gaps = 31/286 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + + LG G +G +A ++ + VAVK ++ + E++K+E+ I + L H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKMLN-H 64
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
ENVVKFY + N Y+ +E C GGEL DRI E DA
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-----------------IGMPEPDA 107
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + + + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNRERLL 164
Query: 277 ---VGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN 330
G+ YVAPE+LKR+ DVWS G++ +L G P+ ++ + +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 224
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376
PW I ++ + K+LV++P AR+T W +
Sbjct: 225 --KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 238 bits (610), Expect = 8e-74
Identities = 95/360 (26%), Positives = 152/360 (42%), Gaps = 43/360 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY K +G G FG + DK + VAVK IE+ I E+V+RE+ ++L H
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLR-H 75
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNA-----------------GRFSEDEA 118
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+Q+L + CH + HRD+K EN L LK DFG S + +
Sbjct: 119 RFFFQQLLSGVSYCHSMQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKST 177
Query: 277 VGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KP 332
VG+ Y+APEVL R+ G +DVWS GV Y++L G PF D E +++ ++
Sbjct: 178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSV 237
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS----- 387
+ IS + ++ V DP R++ + +H W + A + +
Sbjct: 238 KYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQ 297
Query: 388 -----------VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSI 436
++ + + + + + LD ++ D D ID+D +G I
Sbjct: 298 EPEQPMQSLDTIMQIISEATIPAVRNRCLDDFMTDNLDLDDDMDDFDSESEIDIDSSGEI 357
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 237 bits (606), Expect = 2e-73
Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 39/303 (12%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-----VKR 145
+ ++ ++Y+ LG G FG+ + A DK V VK I+K K++ +ED V
Sbjct: 19 EGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL 78
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMEL-CEGGELLDRILAKMISTTLTSAWFLA 204
E+ IL + H N++K + FE+ + + ME G +L I
Sbjct: 79 EIAILSRVE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH------------- 124
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
R E A+ + RQ++ L ++HRD+K EN + ED ++K DFG +
Sbjct: 125 ----PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSA 177
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDG 322
+++ GK F G+ Y APEVL GPE ++WS+GV Y L+ PF +
Sbjct: 178 AYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE----- 232
Query: 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
+E + +S V LL P R T + ++ PWV + + ++
Sbjct: 233 -LEETVEAA--IHPPYL--VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADY 287
Query: 383 PID 385
+
Sbjct: 288 TWE 290
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 236 bits (603), Expect = 3e-73
Identities = 93/310 (30%), Positives = 145/310 (46%), Gaps = 37/310 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y + K +G G F +A G VA+K I+K + + P +++ + REV+I++ L H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILN-H 73
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH-----------------GRMKEKEA 116
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
RQ++ CH +VHRD+K EN L D ++K DFG S+ G K
Sbjct: 117 RSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD---ADMNIKIADFGFSNEFTVGGKLDAF 173
Query: 277 VGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
G+ Y APE+ + K GPE DVWS+GVI Y L+ G PF + + + VLR +
Sbjct: 174 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR--GKY 231
Query: 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP---------ID 385
R + +S ++ +K+ LV +P R T Q + W+ G + E+ D
Sbjct: 232 RIPFY--MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISD 289
Query: 386 ISVLNNMRQF 395
++ M
Sbjct: 290 QKRIDIMVGM 299
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 234 bits (600), Expect = 8e-73
Identities = 85/334 (25%), Positives = 139/334 (41%), Gaps = 31/334 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + + LG G +G +A ++ + VAVK ++ + E++K+E+ I + L H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKMLN-H 64
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
ENVVKFY + N Y+ +E C GGEL DRI E DA
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD-----------------IGMPEPDA 107
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + + + +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNRERLL 164
Query: 277 ---VGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN 330
G+ YVAPE+LKR+ DVWS G++ +L G P+ ++ + +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 224
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN 390
PW I ++ + K+LV++P AR+T W + ++
Sbjct: 225 --KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGG 282
Query: 391 NMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 424
+S+ Q L +
Sbjct: 283 VSESPSGFSKHIQSNLDFSPVNSASRTPGSGWSK 316
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 234 bits (599), Expect = 8e-73
Identities = 75/328 (22%), Positives = 126/328 (38%), Gaps = 43/328 (13%)
Query: 65 TKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
TK Q + T P G + + F+ Y +G LLG G FG + + +V
Sbjct: 4 TKPLQGPPAPPGTPTPPPGGKDR----EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQV 59
Query: 125 AVKKIEKNKMILPIAVED---VKREVKILQAL---AGHENVVKFYNAFEDDNYVYIAMEL 178
A+K I +N+++ + D EV +L + GH V++ + FE + +E
Sbjct: 60 AIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLER 119
Query: 179 -CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 237
+L D I K E + Q++ CH G+VH
Sbjct: 120 PLPAQDLFDYITEK-----------------GPLGEGPSRCFFGQVVAAIQHCHSRGVVH 162
Query: 238 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPE 295
RD+K EN L K DFG + + D G+ Y PE + R
Sbjct: 163 RDIKDENILIDL--RRGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALP 219
Query: 296 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 355
+ VWS+G++ Y ++CG PF +E+L + +S +++ L
Sbjct: 220 ATVWSLGILLYDMVCGDIPFERD------QEILEA--ELHFPAH--VSPDCCALIRRCLA 269
Query: 356 KDPRARLTAAQALSHPWVREGGDASEIP 383
P +R + + L PW++ + +
Sbjct: 270 PKPSSRPSLEEILLDPWMQTPAEDVPLN 297
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 232 bits (594), Expect = 1e-71
Identities = 90/314 (28%), Positives = 147/314 (46%), Gaps = 36/314 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y I + LG G FG +AT +VA+K I + + V+RE+ L+ L H
Sbjct: 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-H 68
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+++K Y+ + + +E GGEL D I+ K R TE +
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEK-----------------KRMTEDEG 110
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+Q++ CH H +VHRD+KPEN L ++ ++K DFGLS+ + G +
Sbjct: 111 RRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTS 167
Query: 277 VGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
GS Y APEV+ K +GPE DVWS G++ Y++L GR PF D+ +FK+V +
Sbjct: 168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV--Y 225
Query: 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP--------IDI 386
+ +S A+ +++++V DP R+T + PW P D
Sbjct: 226 VMPDF--LSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADS 283
Query: 387 SVLNNMRQFVKYSR 400
+++ + + + +S
Sbjct: 284 RIVSKLGEAMGFSE 297
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 236 bits (605), Expect = 1e-71
Identities = 94/315 (29%), Positives = 141/315 (44%), Gaps = 36/315 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y +G LG G FG V + G +VAVK + + K+ V ++RE++ L+ H
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-H 75
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+++K Y + +++ ME GGEL D I R EK++
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN-----------------GRLDEKES 118
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ +Q+L CH H +VHRD+KPEN L + K DFGLS+ + G+ +
Sbjct: 119 RRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTS 175
Query: 277 VGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
GS Y APEV+ + +GPE D+WS GVI Y LLCG PF D +FK++ F
Sbjct: 176 CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--F 233
Query: 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG---------DASEIPID 385
+ ++ S +K +L DP R T H W ++ S ID
Sbjct: 234 YTPQY--LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMID 291
Query: 386 ISVLNNMRQFVKYSR 400
L + + + S
Sbjct: 292 DEALKEVCEKFECSE 306
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 229 bits (586), Expect = 7e-71
Identities = 72/345 (20%), Positives = 119/345 (34%), Gaps = 42/345 (12%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFD 95
H+HH+ Q + + + + + + + + G P + F
Sbjct: 3 HHHHHSSGVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRP------ESFFQ 56
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ + LGHG +G + K +G AVK+ P EV + +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG-PKDRARKLAEVGSHEKVGQ 115
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H V+ A+E+ +Y+ ELC G L + E
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCE----------------AWGASLPEAQ 158
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
+R L A H GLVH D+KP N K DFGL + +
Sbjct: 159 VWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG---PRGRCKLGDFGLLVELGTAGAGEV 215
Query: 276 IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF-----WDKTEDGIFKEVLRN 330
G Y+APE+L+ G +DV+S+G+ + C W + G
Sbjct: 216 QEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEF-- 273
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+S+ + + +L DP+ R TA L+ P +R+
Sbjct: 274 --------TAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 230 bits (587), Expect = 1e-70
Identities = 66/333 (19%), Positives = 123/333 (36%), Gaps = 50/333 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK--------------NKMILPIAVED 142
Y I + L G+F + A+KK EK +K+ + +D
Sbjct: 32 DYRIIRTLNQGKFNKIILCEKD--NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 143 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWF 202
K E++I+ + +E + + + VYI E E +L
Sbjct: 90 FKNELQIITDIK-NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF---------V 139
Query: 203 LAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDF 261
L + +++ +L + H + HRD+KP N L ++ +K +DF
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD---KNGRVKLSDF 196
Query: 262 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDK 318
G S+ KK + G+ ++ PE + +G + D+WS+G+ Y++ PF K
Sbjct: 197 GESE-YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255
Query: 319 -TEDGIFKEVLRNKPDF---------------RRKPWPSISNSAKDFVKKLLVKDPRARL 362
+ +F + ++ +SN DF+K L K+P R+
Sbjct: 256 ISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERI 315
Query: 363 TAAQALSHPWVREGGDASEIPIDISVLNNMRQF 395
T+ AL H W+ + + ++
Sbjct: 316 TSEDALKHEWLADTNIEDLREFSKELYKKRKKL 348
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 238 bits (607), Expect = 3e-70
Identities = 65/330 (19%), Positives = 125/330 (37%), Gaps = 45/330 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + + LG G FGY + G++VA+K+ + P E E++I++ L H
Sbjct: 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLN-H 71
Query: 157 ENVVKFYNAFEDDNYV------YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
NVV + + +AME CEGG+L +
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF--------------ENCCG 117
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
E ++ + H + ++HRD+KPEN + + + K D G + + G
Sbjct: 118 LKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG 177
Query: 271 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
+ + VG+ Y+APE+L++K D WS G + + + G RPF + + +R
Sbjct: 178 ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVR 237
Query: 330 NKPDFRRKPWPSISNS--------------------AKDFVKKLLVKDPRARLTAAQALS 369
K + + ++ + + +++ +L+ R R T Q +
Sbjct: 238 EKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPN 297
Query: 370 HPWVREGGDA-SEIPIDISVLNNMRQFVKY 398
+ S + + + + R
Sbjct: 298 VGCFQALDSILSLKLLSVMNMVSGRVHTYP 327
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 224 bits (573), Expect = 2e-69
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
Y + +G G +G K++G + K+++ M + + EV +L+ L
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELK- 63
Query: 156 HENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N+V++Y+ D + +YI ME CEGG+L I ++ E
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK-------------GTKERQYLDE 110
Query: 214 KDAAVVVRQMLRVAAECH-----LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI 267
+ V+ Q+ ECH H ++HRD+KP N FL ++K DFGL+ +
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG----KQNVKLGDFGLARIL 166
Query: 268 KPGKKF-QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325
F + VG+ YY++PE + R S +SD+WS+G + Y L PF ++ +
Sbjct: 167 NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG 226
Query: 326 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++ K P S+ + + ++L R + + L +P + E
Sbjct: 227 KIREGKFR----RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 226 bits (576), Expect = 9e-69
Identities = 55/401 (13%), Positives = 116/401 (28%), Gaps = 80/401 (19%)
Query: 37 HNHHARNDTTHKHQH----------QHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRT 86
H+HH + + + ++ N + +S T + G+
Sbjct: 3 HHHHHSSGRENLYFQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPF 62
Query: 87 DFG-YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR 145
+ R G +LG ATD+ G+ V + A++ +K
Sbjct: 63 RVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKE 122
Query: 146 EVKILQALA------------------------GHENVVKFYNAFEDDN--YVYIAMELC 179
EV L+ L + +++ D +
Sbjct: 123 EVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM 182
Query: 180 EG--GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 237
+ + +L+ + Q++R+ A H +GLVH
Sbjct: 183 QSNLQTFGEVLLSH-------------SSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH 229
Query: 238 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS----- 292
++P + + + + T F S + PE+ R++
Sbjct: 230 TYLRPVDIVLD---QRGGVFLTGFEHL---VRDGARVVSSVSRGFEPPELEARRATISYH 283
Query: 293 -------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 345
D W++G++ Y + C P G + + R+ + I
Sbjct: 284 RDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKN--------IPQP 335
Query: 346 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGD--ASEIPI 384
+ ++ L RL QA+ P + ++ +P+
Sbjct: 336 VRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPL 376
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 222 bits (569), Expect = 2e-68
Identities = 76/342 (22%), Positives = 136/342 (39%), Gaps = 46/342 (13%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQ 108
H H H + ++ + + + +Y +G LLG G
Sbjct: 5 HHHHHHSSGLVPRGSHMAPCNDLHATKLAPGKE---------KEPLESQYQVGPLLGSGG 55
Query: 109 FGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKILQALA-GHENVVKFYN 164
FG Y ++ VA+K +EK+++ + + V EV +L+ ++ G V++ +
Sbjct: 56 FGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115
Query: 165 AFEDDNYVYIAMELCEG-GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
FE + + +E E +L D I + E+ A Q+
Sbjct: 116 WFERPDSFVLILERPEPVQDLFDFITER-----------------GALQEELARSFFWQV 158
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 283
L CH G++HRD+K EN L LK DFG +K + D G+ Y
Sbjct: 159 LEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKDT-VYTDFDGTRVYS 215
Query: 284 APEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 341
PE ++ G + VWS+G++ Y ++CG PF +E++R + +
Sbjct: 216 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQ--VFFRQR-- 265
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
+S+ + ++ L P R T + +HPW+++ E
Sbjct: 266 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETA 307
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 219 bits (561), Expect = 3e-67
Identities = 76/312 (24%), Positives = 129/312 (41%), Gaps = 37/312 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAG 155
+Y +G LLG G +G D R AVK ++K K+ +P +VK+E+++L+ L
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR- 64
Query: 156 HENVVKFYN--AFEDDNYVYIAMELCEGG--ELLDRILAKMISTTLTSAWFLAIRKDSRY 211
H+NV++ + E+ +Y+ ME C G E+LD + K R+
Sbjct: 65 HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK------------------RF 106
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIK 268
A Q++ H G+VH+D+KP N L +LK + G++
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT---TGGTLKISALGVAEALHPFA 163
Query: 269 PGKKFQDIVGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325
+ GS + PE+ SG + D+WS GV Y + G PF +F+
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFE 223
Query: 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 385
+ + + D +K +L +P R + Q H W R+ +E P+
Sbjct: 224 NIGKG--SYAIPGD--CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVP 279
Query: 386 ISVLNNMRQFVK 397
I + + +
Sbjct: 280 IPPSPDTKDRWR 291
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 220 bits (563), Expect = 5e-67
Identities = 73/315 (23%), Positives = 141/315 (44%), Gaps = 29/315 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y + +G G FG + +G + +K+I ++M E+ +REV +L + H
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANMK-H 82
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+V++ +FE++ +YI M+ CEGG+L RI A +K + E
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA---------------QKGVLFQEDQI 127
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF-Q 274
Q+ H ++HRD+K +N FL K D +++ DFG++ + + +
Sbjct: 128 LDWFVQICLALKHVHDRKILHRDIKSQNIFLTK----DGTVQLGDFGIARVLNSTVELAR 183
Query: 275 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+G+ YY++PE+ + K +SD+W++G + Y L + F + + +++
Sbjct: 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF- 242
Query: 334 FRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNM 392
P S + V +L ++PR R + L ++ + + P I+ +
Sbjct: 243 ---PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCL 299
Query: 393 RQFVKYSRLKQFALR 407
+ F K+ A R
Sbjct: 300 KTFSKFGSQPIPAKR 314
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 217 bits (554), Expect = 1e-66
Identities = 69/303 (22%), Positives = 117/303 (38%), Gaps = 53/303 (17%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
DK F + +L+G G FG + A + +G +K+++ N E +REVK L
Sbjct: 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKAL 58
Query: 151 QALAGHENVVKFYNAFED----------------DNYVYIAMELCEGGELLDRILAKMIS 194
L H N+V + ++ ++I ME C+ G L I
Sbjct: 59 AKLD-HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI------ 111
Query: 195 TTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKED 253
R+ + + A + Q+ + H L++RD+KP N FL
Sbjct: 112 ---------EKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD----T 158
Query: 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGR 312
+K DFGL +K K G+ Y++PE + + G E D++++G+I LL
Sbjct: 159 KQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVC 218
Query: 313 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
++ F ++ K ++KLL K P R ++ L
Sbjct: 219 DTAFET--SKFFTDLRDGIIS------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270
Query: 373 VRE 375
V +
Sbjct: 271 VWK 273
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 216 bits (552), Expect = 5e-66
Identities = 77/308 (25%), Positives = 134/308 (43%), Gaps = 54/308 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--------------------- 135
+YT+ +G G +G +A ++ + A+K + K K+I
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 136 --LPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAK 191
+E V +E+ IL+ L H NVVK +D ++++Y+ EL G +++
Sbjct: 74 IQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME----- 127
Query: 192 MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251
+ +E A + +++ H ++HRD+KP N L
Sbjct: 128 -------------VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG--- 171
Query: 252 EDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITY 306
ED +K DFG+S+ K + VG+ ++APE L K SG DVW++GV Y
Sbjct: 172 EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231
Query: 307 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 366
+ G+ PF D+ + ++ +F P I+ KD + ++L K+P +R+ +
Sbjct: 232 CFVFGQCPFMDERIMCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPE 289
Query: 367 ALSHPWVR 374
HPWV
Sbjct: 290 IKLHPWVT 297
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197 | Back alignment and structure |
|---|
Score = 208 bits (531), Expect = 2e-64
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 16/199 (8%)
Query: 366 QALSHPWVRE-GGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 424
H RE + + ++L N++ F K + LK+ AL +A L D E+ +LR+
Sbjct: 3 HHHHHSSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNI 62
Query: 425 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484
F A+DVD +G++S +E+ L K + ++ + ++L+ ID N G + +++F+AAT+
Sbjct: 63 FIALDVDNSGTLSSQEILDGL-KKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATID 121
Query: 485 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--------SIDPLLEE 536
+ + F+ FDID +G I+ EEL+ G +ID LL+E
Sbjct: 122 KQTYLKKE----VCL--IPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQE 175
Query: 537 ADIDKDGRISLSEFRRLLR 555
D++ DG I EF ++
Sbjct: 176 VDLNGDGEIDFHEFMLMMS 194
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 3e-63
Identities = 58/328 (17%), Positives = 110/328 (33%), Gaps = 44/328 (13%)
Query: 63 LKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGD 122
+ + H +S + + G ++ Y + LG G F Y + +G
Sbjct: 1 MGSSHHHHHHSSGRENLYFQGHMVIID-----NKHYLFIQKLGEGGFSYVDLVEGLHDGH 55
Query: 123 RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD----NYVYIAMEL 178
A+K+I ++ E+ +RE + + H N+++ + + ++ +
Sbjct: 56 FYALKRILCHEQ---QDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPF 111
Query: 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 238
+ G L + I K + TE ++ + R H G HR
Sbjct: 112 FKRGTLWNEIERL-------------KDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHR 158
Query: 239 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD----------IVGSAYYVAPEVL 288
D+KP N L + D G + + + Y APE+
Sbjct: 159 DLKPTNILLGD---EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELF 215
Query: 289 KRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 344
+S +DVWS+G + Y ++ G P+ + G L + P S+
Sbjct: 216 SVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV-ALAVQNQLSIPQSPRHSS 274
Query: 345 SAKDFVKKLLVKDPRARLTAAQALSHPW 372
+ + ++ DP R LS
Sbjct: 275 ALWQLLNSMMTVDPHQRPHIPLLLSQLE 302
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191 | Back alignment and structure |
|---|
Score = 202 bits (516), Expect = 3e-62
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 368 LSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 427
+ H G + I VL N + + + ++ A+ +A +D ++ L+ F
Sbjct: 1 MHHHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLV 60
Query: 428 IDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 487
+D D G I+ E++++ L K KL + +L ID + G +D++EF+AA L Q
Sbjct: 61 LDEDGKGYITKEQLKKGLEK-DGLKLPYN-FDLLLDQIDSDGSGKIDYTEFIAAALDRKQ 118
Query: 488 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS--------IDPLLEE 536
L + + AF FD+D DG IT EL + KG+ + ++ +
Sbjct: 119 LSKK-----LIY--CAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRD 171
Query: 537 ADIDKDGRISLSEFRRLLR 555
D + DG+I EF +++
Sbjct: 172 VDKNNDGKIDFHEFSEMMK 190
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 202 bits (517), Expect = 7e-61
Identities = 71/292 (24%), Positives = 121/292 (41%), Gaps = 25/292 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ I K +G GQF Y A +G VA+KK++ ++ A D +E+ +L+ L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-H 91
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
NV+K+Y +F +DN + I +EL + G+L I ++ E+
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKH-------------FKKQKRLIPERTV 138
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF-Q 274
Q+ H ++HRD+KP N F+ +K D GL F
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITA----TGVVKLGDLGLGRFFSSKTTAAH 194
Query: 275 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNK 331
+VG+ YY++PE + +SD+WS+G + Y + + PF+ + + K++ +
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC- 253
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
D+ P S + V + DP R AS +
Sbjct: 254 -DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE 304
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 1e-58
Identities = 57/386 (14%), Positives = 112/386 (29%), Gaps = 52/386 (13%)
Query: 23 NHHRNANKEEAKRRHNHHARN-DTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIP 81
+HH +++ E + + ++ N + +S T +
Sbjct: 3 HHHHHSSGRENLYFQGFRGTDPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWN 62
Query: 82 CGKRTDFG-YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
G+ + R G +LG ATD+ G+ V + A+
Sbjct: 63 TGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAI 122
Query: 141 EDVKREVKILQALAG---------------------HENVVKFYNAFEDDNYVYIAMELC 179
+ +K EV L+ L G K D+ +++
Sbjct: 123 KQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRF- 181
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 239
+ T + Q++R+ A H +GLVH
Sbjct: 182 -----FLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 236
Query: 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY----YVAPEVL------K 289
++P + + + + T F ++ G +G + A +L
Sbjct: 237 LRPVDIVLD---QRGGVFLTGFEHL--VRDGASAVSPIGRGFAPPETTAERMLPFGQHHP 291
Query: 290 RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 349
D W++G+ Y + C P D G + + R+ + I +
Sbjct: 292 TLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKN--------IPQPVRAL 343
Query: 350 VKKLLVKDPRARLTAAQALSHPWVRE 375
++ L RL QA+ P +
Sbjct: 344 LEGFLRYPKEDRLLPLQAMETPEYEQ 369
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 1e-58
Identities = 63/301 (20%), Positives = 122/301 (40%), Gaps = 43/301 (14%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
+ + + +G G+FG + + +G A+K+ +K + ++ REV
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG-SVDEQNALREVYAHAV 66
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
L H +VV++++A+ +D+++ I E C GG L D I R S +
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY-------------RIMSYFK 113
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS---------------AKEDSSL 256
E + ++ Q+ R H LVH D+KP N F+ ++ A
Sbjct: 114 EAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF 173
Query: 257 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRP 314
K D G I + G + ++A EVL+ P++D++++ +T + G P
Sbjct: 174 KIGDLGHVTRISSPQVE---EGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEP 229
Query: 315 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
+ + E+ + + P +S + +K ++ DP R +A + H +
Sbjct: 230 LPRNGDQ--WHEIRQGRLP----RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 283
Query: 374 R 374
Sbjct: 284 L 284
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 192 bits (489), Expect = 2e-56
Identities = 63/305 (20%), Positives = 116/305 (38%), Gaps = 54/305 (17%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
+ R + ++L G F + Y A D +G A+K++ N+ + +EV ++ L+
Sbjct: 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE---EKNRAIIQEVCFMKKLS 83
Query: 155 GHENVVKFYNAF--------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
GH N+V+F +A + ELC+G L++ +
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQ-LVEFLKKM--------------E 128
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ + Q R H ++HRD+K EN L + ++K DFG +
Sbjct: 129 SRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN---QGTIKLCDFGSA 185
Query: 265 DFIKPGKKFQDI-------------VGSAYYVAPEVLKRKS----GPESDVWSIGVITYI 307
I + + Y PE++ S G + D+W++G I Y+
Sbjct: 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYL 245
Query: 308 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 367
L + PF EDG ++ K + P + ++ +L +P RL+ A+
Sbjct: 246 LCFRQHPF----EDGAKLRIVNGK--YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV 299
Query: 368 LSHPW 372
+
Sbjct: 300 VHQLQ 304
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 191 bits (486), Expect = 2e-56
Identities = 71/315 (22%), Positives = 116/315 (36%), Gaps = 53/315 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + LG G FG + A +K + A+K+I +A E V REVK L L H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR--ELAREKVMREVKALAKLE-H 62
Query: 157 ENVVKFYNAFEDDN------------YVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
+V+++NA+ + N Y+YI M+LC L D + +
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR------------- 109
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ Q+ H GL+HRD+KP N F D +K DFGL
Sbjct: 110 -CTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLV 165
Query: 265 -------------DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 310
+ + VG+ Y++PE + S + D++S+G+I + LL
Sbjct: 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225
Query: 311 GRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
PF + E +V K + V+ +L P R A +
Sbjct: 226 ---PFSTQMERVRTLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279
Query: 370 HPWVREGGDASEIPI 384
+ + + +
Sbjct: 280 NAVFEDLDFPGKTVL 294
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 3e-54
Identities = 69/172 (40%), Positives = 108/172 (62%), Gaps = 11/172 (6%)
Query: 393 RQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 452
+QF ++ K+ ALR +A +L +EE+A L++ F+ ID DK+G I+ EE++ L K +
Sbjct: 1 KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGL-KRVGAN 59
Query: 453 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 512
LKES +L+++QA D + G +D+ EF+AATLH++++E D HL AAF FD D
Sbjct: 60 LKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFTYFDKDGS 113
Query: 513 GFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASIS 560
G+ITP+EL+ G I+ L+ + D D DGRI +EF +++ SI+
Sbjct: 114 GYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSIT 165
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 1e-53
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 384 IDISVLNNMRQFVKYSRLKQFALRALASTLD--DEELADLRDQFDAIDVDKNGSISLEEM 441
I +VLNNM+ ++K+S ++ + +A L + + + + F +D + NGS+S E+
Sbjct: 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61
Query: 442 RQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 501
LA +K+ + ILQA+D N G + ++EF+A +E L+
Sbjct: 62 YTVLAS---VGIKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIEST-----FLK-- 111
Query: 502 AAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDG--------RISLSE 549
AAF K D D DG+I+ ++ K ID K G +IS E
Sbjct: 112 AAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQE 171
Query: 550 FRRLLRT 556
F+ + +
Sbjct: 172 FKDYMLS 178
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 1e-53
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 21/189 (11%)
Query: 383 PIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEM 441
L NM++F +L Q A+ + S L EE +L F +D + +G + +E+
Sbjct: 3 HALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKEL 62
Query: 442 RQALAKDLPW----------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 491
+ K + W E+ V ILQ++D + +G +++SEFV + L
Sbjct: 63 IEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSR 122
Query: 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISL 547
+ L AAF++FD D G IT EEL G+ + +L+E D + DG +
Sbjct: 123 E----RLL--AAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDF 176
Query: 548 SEFRRLLRT 556
EF +++
Sbjct: 177 EEFVEMMQK 185
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 183 bits (465), Expect = 8e-53
Identities = 55/297 (18%), Positives = 95/297 (31%), Gaps = 41/297 (13%)
Query: 95 DRRYTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
+ + LLG G F Y AT D N + +K + P + ++
Sbjct: 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMER 120
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
L+ +KFY+A N + EL G LL+ I + +
Sbjct: 121 LKPSM-QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTP------------EK 167
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS--------AKEDSSLKATDF 261
+ +ML + + H ++H D+KP+NF+ + + L D
Sbjct: 168 VMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDL 227
Query: 262 GLSDFIK---PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWD 317
G S +K G F ++ + E+L K + D + + Y +L G
Sbjct: 228 GQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
E G K + W +F +L L + L +
Sbjct: 288 N-EGGECKPEGLFRRLPHLDMW-------NEFFHVMLNIPDCHHLPSLDLLRQKLKK 336
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 182 bits (463), Expect = 1e-52
Identities = 75/337 (22%), Positives = 122/337 (36%), Gaps = 46/337 (13%)
Query: 51 HQHQERAKNYQQLKTKQHQ---KTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHG 107
H AK + K + +T + K D+ Y ++ T +G G
Sbjct: 11 HSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEV-HWMTHQPRVGRG 69
Query: 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK-REVKILQALAGHENVVKFYNAF 166
FG + DK G + AVKK+ +E + E+ L+ +V Y A
Sbjct: 70 SFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLS-SPRIVPLYGAV 119
Query: 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRV 226
+ +V I MEL EGG L I++ E A + Q L
Sbjct: 120 REGPWVNIFMELLEGGSLGQ-----------------LIKQMGCLPEDRALYYLGQALEG 162
Query: 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK------KFQDIVGSA 280
H ++H D+K +N L + + S DFG + ++P I G+
Sbjct: 163 LEYLHTRRILHGDVKADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 220
Query: 281 YYVAPEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKEVLRNKPDFRRK 337
++APEV+ K + D+WS + +L G P+ K + P R
Sbjct: 221 THMAPEVVMGKPCDAKVDIWSSC-CMMLHMLNGCHPWTQYFRGPLCLK-IASEPPPIREI 278
Query: 338 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
P PS + +++ L K+P R +A +
Sbjct: 279 P-PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 3e-52
Identities = 90/295 (30%), Positives = 134/295 (45%), Gaps = 47/295 (15%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+DF GK+LG G F +A + A A+K +EK +I V V RE ++
Sbjct: 30 EDFK----FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 85
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
L H VK Y F+DD +Y + + GEL IRK +
Sbjct: 86 RL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-----------------LKYIRKIGSF 127
Query: 212 TEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS--- 264
E ++ V+A +LH G++HRD+KPEN L + ++ TDFG +
Sbjct: 128 DETCTRFYTAEI--VSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFGTAKVL 180
Query: 265 DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI 323
+ VG+A YV+PE+L KS SD+W++G I Y L+ G PF E I
Sbjct: 181 SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 240
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA------LSHPW 372
F+++++ + DF P A+D V+KLLV D RL + +HP+
Sbjct: 241 FQKIIKLEYDF---P-EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 291
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 2e-51
Identities = 72/293 (24%), Positives = 131/293 (44%), Gaps = 33/293 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+LG G +G Y D +N R+A+K+I + + + E+ + + L H
Sbjct: 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLK-H 78
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+N+V++ +F ++ ++ I ME GG L L + + ++ + E+
Sbjct: 79 KNIVQYLGSFSENGFIKIFMEQVPGGSLSA----------LLRSKWGPLKDN----EQTI 124
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQD 275
+Q+L H + +VHRD+K +N L + LK +DFG S + +
Sbjct: 125 GFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT--YSGVLKISDFGTSKRLAGINPCTET 182
Query: 276 IVGSAYYVAPEVLKRKS---GPESDVWSIGVITYI-LLCGRRPFWDKTEDG--IFK-EVL 328
G+ Y+APE++ + G +D+WS+G T I + G+ PF++ E +FK +
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLG-CTIIEMATGKPPFYELGEPQAAMFKVGMF 241
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
+ P+ P S+S AK F+ K DP R A L +++ +
Sbjct: 242 KVHPEI---P-ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKK 290
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 2e-47
Identities = 46/230 (20%), Positives = 85/230 (36%), Gaps = 31/230 (13%)
Query: 335 RRKPWPSISNSAKDFVKKLLVKDPR------ARLTAAQALSHPWVREGGDASEIPIDISV 388
R + I+ ++ KL D + AR A + A + + +
Sbjct: 39 RDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAAR--GDAAAEKQRLASLL 96
Query: 389 LNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 448
+ Y+RL+ L +E+ LR F + V +G S ++++Q LAK
Sbjct: 97 KDLEDDASGYNRLRPSK-----PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK- 150
Query: 449 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 508
+ E + ++ ++ +T G + + VA + L A F K D
Sbjct: 151 YADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAAL------------VADFRKID 198
Query: 509 IDRDGFITPEELR-----MHTGLKGSIDPLLEEADIDKDGRISLSEFRRL 553
+ +G ++ +E R + K D L AD D+ + SE+ L
Sbjct: 199 TNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHL 248
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 3e-10
Identities = 16/72 (22%), Positives = 30/72 (41%)
Query: 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 477
L LR + D DK+G +S EE+++ L + + +D + + + E
Sbjct: 252 LLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQE 311
Query: 478 FVAATLHVHQLE 489
FV L + +
Sbjct: 312 FVMLVLLMFHDD 323
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 6e-47
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 33/335 (9%)
Query: 52 QHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGY 111
H + L T+ + R D +G G G
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVD-QGDPRLLLDSYVKIGEGSTGI 60
Query: 112 TYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171
+A +K +G +VAVK ++ K E + EV I++ H NVV+ Y ++
Sbjct: 61 VCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEE 116
Query: 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 231
+++ ME +GG L D I R E+ A V +L+ A H
Sbjct: 117 LWVLMEFLQGGALTD------------------IVSQVRLNEEQIATVCEAVLQALAYLH 158
Query: 232 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR 290
G++HRD+K ++ L D +K +DFG I K + +VG+ Y++APEV+ R
Sbjct: 159 AQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISR 215
Query: 291 KS-GPESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAK 347
E D+WS+G I I ++ G P++ + + + P + +S +
Sbjct: 216 SLYATEVDIWSLG-IMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS--HKVSPVLR 272
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
DF++++LV+DP+ R TA + L HP++ + G +
Sbjct: 273 DFLERMLVRDPQERATAQELLDHPFLLQTGLPECL 307
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 7e-47
Identities = 57/295 (19%), Positives = 112/295 (37%), Gaps = 36/295 (12%)
Query: 91 DKDFDRRYT-IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
D R+ +G G F Y D VA +++ K + + K E ++
Sbjct: 20 GMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK-LTKSERQRFKEEAEM 78
Query: 150 LQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
L+ L H N+V+FY+++E + + EL G L +
Sbjct: 79 LKGLQ-HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKT-----------------YL 120
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHG----LVHRDMKPENFLFKSAKEDSSLKATDF 261
++ K RQ+L+ LH ++HRD+K +N S+K D
Sbjct: 121 KRFKVMKIKVLRSWCRQILK--GLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDL 176
Query: 262 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED 321
GL+ +K + ++G+ ++APE+ + K DV++ G+ + P+ +
Sbjct: 177 GLAT-LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNA 235
Query: 322 G-IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
I++ V K+ ++ + ++ R + L+H + +E
Sbjct: 236 AQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 2e-46
Identities = 77/321 (23%), Positives = 144/321 (44%), Gaps = 47/321 (14%)
Query: 84 KRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV 143
D +D + + +L+G+G +G Y G A+K ++ + E++
Sbjct: 12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEI 67
Query: 144 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTL 197
K+E+ +L+ + H N+ +Y AF D+ +++ ME C G + D
Sbjct: 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD----------- 116
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257
+ K + E+ A + R++LR + H H ++HRD+K +N L E++ +K
Sbjct: 117 ----LIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVK 169
Query: 258 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSGPES------DVWSIGVITYI-LL 309
DFG+S + + +G+ Y++APEV+ P++ D+WS+G IT I +
Sbjct: 170 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG-ITAIEMA 228
Query: 310 CGRRPFWD----KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
G P D + +F P + K W S + F++ LVK+ R
Sbjct: 229 EGAPPLCDMHPMRA---LFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATE 282
Query: 366 QALSHPWVREGGDASEIPIDI 386
Q + HP++R+ + ++ I +
Sbjct: 283 QLMKHPFIRDQPNERQVRIQL 303
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 1e-45
Identities = 75/296 (25%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D ++YT + +G G G Y A D A G VA++++ + E + E+ ++
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVM 71
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+ + N+V + +++ + +++ ME GG L D + ++
Sbjct: 72 RENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD------------------VVTETC 112
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPE 169
Query: 271 K-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKE 326
+ K +VG+ Y++APEV+ RK+ GP+ D+WS+G I I ++ G P+ ++ ++
Sbjct: 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG-IMAIEMIEGEPPYLNENPLRALYLI 228
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
P+ + +S +DF+ + L D R +A + L H +++ S +
Sbjct: 229 ATNGTPELQNP--EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSL 282
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 4e-45
Identities = 85/345 (24%), Positives = 144/345 (41%), Gaps = 35/345 (10%)
Query: 45 TTHKHQHQHQERAKNYQQLKTKQHQKTN-SRRQTGVIPCGKRTDFGYDKDFDRRYTIGKL 103
+ + H H H + L + + + G + + + D ++ ++ +
Sbjct: 2 SYYHHHHHHDYDIPTTENLYFQGAMDPMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLRE 61
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+GHG FG Y A D N + VA+KK+ + +D+ +EV+ LQ L H N +++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYR 120
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ ++ ++ ME C G D L ++ L E + A V
Sbjct: 121 GCYLREHTAWLVMEYCLGS-ASD--LLEVHKKPL--------------QEVEIAAVTHGA 163
Query: 224 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 283
L+ A H H ++HRD+K N L E +K DFG + + P F VG+ Y++
Sbjct: 164 LQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANSF---VGTPYWM 217
Query: 284 APEVLKRKS----GPESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKEVLRNKPDFRRK 337
APEV+ + DVWS+G IT I L + P ++ ++ P +
Sbjct: 218 APEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHIAQNESPALQSG 276
Query: 338 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
W S ++FV L K P+ R T+ L H +V + I
Sbjct: 277 HW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVI 318
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 1e-44
Identities = 84/305 (27%), Positives = 127/305 (41%), Gaps = 43/305 (14%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D D + + I LG G FG Y A +K G A K IE +ED E++IL
Sbjct: 14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEIL 70
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H +VK A+ D ++I +E C GG + + + LT
Sbjct: 71 ATCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA--IMLELDRGLT------------ 115
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
E VV RQML H ++HRD+K N L + ++ DFG+S
Sbjct: 116 --EPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT---LEGDIRLADFGVSAKNLKT 170
Query: 271 K-KFQDIVGSAYYVAPEVLKRKSGPES------DVWSIGVITYI-LLCGRRPFWD----K 318
K +G+ Y++APEV+ ++ ++ D+WS+G IT I + P + +
Sbjct: 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG-ITLIEMAQIEPPHHELNPMR 229
Query: 319 TEDGIFKEVLRNKPDFRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377
+ K + P W S +DF+K L K+P R +AAQ L HP+V
Sbjct: 230 V---LLKIAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT 283
Query: 378 DASEI 382
+
Sbjct: 284 SNKAL 288
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 1e-44
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 31/299 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y + +++G G A ++VA+K+I K +++++ +E++ + H
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCH-H 72
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+V +Y +F + +++ M+L GG +LD I + S E
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL---------DESTI 123
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI------KPG 270
A ++R++L H +G +HRD+K N L ED S++ DFG+S F+
Sbjct: 124 ATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRN 180
Query: 271 KKFQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYI-LLCGRRPFWDKTEDGIFKEV 327
K + VG+ ++APEV+++ G ++D+WS G IT I L G P+ +
Sbjct: 181 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG-ITAIELATGAAPYHKYPPMKVLMLT 239
Query: 328 LRNKP------DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380
L+N P ++ S + + L KDP R TAA+ L H + ++ +
Sbjct: 240 LQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKE 298
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 3e-44
Identities = 79/332 (23%), Positives = 136/332 (40%), Gaps = 48/332 (14%)
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
+L ++ + ++ K D DF+ K++G G F V K
Sbjct: 29 GASELAQDKYVADFLQWAEPIVVRLKEVRLQRD-DFEIL----KVIGRGAFSEVAVVKMK 83
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178
G A+K + K M+ V + E +L + + + AF+D+NY+Y+ ME
Sbjct: 84 QTGQVYAMKIMNKWDMLKRGEVSCFREERDVL-VNGDRRWITQLHFAFQDENYLYLVMEY 142
Query: 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLV 236
GG+LL L + R + A + ++ V A +H G V
Sbjct: 143 YVGGDLL----------------TLLSKFGERIPAEMARFYLAEI--VMAIDSVHRLGYV 184
Query: 237 HRDMKPENFLFKSAKEDSS--LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKRKS 292
HRD+KP+N L D ++ DFG ++ + VG+ Y++PE+L+
Sbjct: 185 HRDIKPDNILL-----DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVG 239
Query: 293 --------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-IS 343
GPE D W++GV Y + G+ PF+ + + +++ K +
Sbjct: 240 GGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVP 299
Query: 344 NSAKDFVKKLLVKDPRARLTAAQAL---SHPW 372
A+DF+++LL P RL A +HP+
Sbjct: 300 EEARDFIQRLL-CPPETRLGRGGAGDFRTHPF 330
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 3e-44
Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 68/317 (21%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
Y + + LG G++ + A + N ++V VK ++ P+ + +KRE+KIL+ L
Sbjct: 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK------PVKKKKIKREIKILENLR 88
Query: 155 GHENVVKFYNAFEDD---NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
G N++ + +D + + D ++ T LT D R+
Sbjct: 89 GGPNIITLADIVKDPVSRTPALVFEHV----NNTD--FKQLYQT-LTDY-------DIRF 134
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+ ++L+ CH G++HRD+KP N + L+ D+GL++F PG+
Sbjct: 135 -------YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQ 185
Query: 272 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-------------- 315
++ V S Y+ PE+L + D+WS+G + ++ + PF
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
Query: 316 -----------WDKTEDGIFKEVLRNKPDFRRKPW---------PSISNSAKDFVKKLLV 355
DK + RK W +S A DF+ KLL
Sbjct: 246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 305
Query: 356 KDPRARLTAAQALSHPW 372
D ++RLTA +A+ HP+
Sbjct: 306 YDHQSRLTAREAMEHPY 322
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 5e-44
Identities = 83/342 (24%), Positives = 141/342 (41%), Gaps = 59/342 (17%)
Query: 43 NDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGK 102
N K + + + + K +K + Q FD K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQL----------DQFD----RIK 47
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKL 106
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
+F+D++ +Y+ ME GGE+ F +R+ R++E A Q
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEM-----------------FSHLRRIGRFSEPHARFYAAQ 149
Query: 223 MLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV--- 277
+ V +LH L++RD+KPEN L ++ TDFG + K+ +
Sbjct: 150 I--VLTFEYLHSLDLIYRDLKPENLLIDQ---QGYIQVTDFGFA------KRVKGRTWTL 198
Query: 278 -GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ +APE++ K D W++GV+ Y + G PF+ I+++++ K F
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF- 257
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPW 372
P S+ KD ++ LL D R + +H W
Sbjct: 258 --P-SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 9e-44
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 34/297 (11%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
K + + + + LG G +G Y A K G VA+K++ ++++ +E+ I+
Sbjct: 24 TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIM 78
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
Q +VVK+Y ++ + ++I ME C G + D + ++ + TLT
Sbjct: 79 QQCD-SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD--IIRLRNKTLT------------ 123
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
E + A +++ L+ H +HRD+K N L + K DFG++ +
Sbjct: 124 --EDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN---TEGHAKLADFGVAGQLTDT 178
Query: 271 K-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKE 326
K ++G+ +++APEV++ +D+WS+G IT I + G+ P+ D IF
Sbjct: 179 MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLG-ITAIEMAEGKPPYADIHPMRAIFMI 237
Query: 327 VLRNKPDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
P FR + W S++ DFVK+ LVK P R TA Q L HP+VR S +
Sbjct: 238 PTNPPPTFRKPELW---SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSIL 291
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 1e-43
Identities = 68/295 (23%), Positives = 127/295 (43%), Gaps = 45/295 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
F+ IGK G FG + A+K + K K + V +V +E++I+Q
Sbjct: 16 HFEILRAIGK----GSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
L H +V + +F+D+ +++ ++L GG+L ++++ +
Sbjct: 72 LE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDL-----------------RYHLQQNVHFK 113
Query: 213 EKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLSDFIK 268
E+ + + ++ V A +L ++HRDMKP+N L D + TDF ++ +
Sbjct: 114 EETVKLFICEL--VMALDYLQNQRIIHRDMKPDNILL-----DEHGHVHITDFNIAAMLP 166
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWDKTEDG-- 322
+ + G+ Y+APE+ + G D WS+GV Y LL GRRP+ ++
Sbjct: 167 RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK 226
Query: 323 -IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVRE 375
I + + S +KKLL +P R + + + P++ +
Sbjct: 227 EIVHTFETTVVTYP----SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 1e-43
Identities = 84/328 (25%), Positives = 133/328 (40%), Gaps = 46/328 (14%)
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
++ L+ ++ R I + + D++ + K++G G FG + K
Sbjct: 37 DFPALRKNKNIDNFLSRYKDTINKIRDLRMKAE-DYE----VVKVIGRGAFGEVQLVRHK 91
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178
+ A+K + K +MI E I+ A A VV+ + AF+DD Y+Y+ ME
Sbjct: 92 STRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLFYAFQDDRYLYMVMEY 150
Query: 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLV 236
GG+L + EK A ++ V A +H G +
Sbjct: 151 MPGGDL-----------------VNLMSN-YDVPEKWARFYTAEV--VLALDAIHSMGFI 190
Query: 237 HRDMKPENFLFKSAKEDSS--LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKRKS 292
HRD+KP+N L D S LK DFG + + VG+ Y++PEVLK +
Sbjct: 191 HRDVKPDNMLL-----DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 293 -----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 347
G E D WS+GV Y +L G PF+ + G + +++ +K IS AK
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAK 305
Query: 348 DFVKKLLVKDPRARLTAAQAL---SHPW 372
+ + L D RL H +
Sbjct: 306 NLICAFL-TDREVRLGRNGVEEIKRHLF 332
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 1e-43
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 31/295 (10%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D + +T + +G G FG + D VA+K I+ + I ED+++E+ +L
Sbjct: 17 KADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVL 74
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
V K+Y ++ D ++I ME GG LD + +
Sbjct: 75 SQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALD------------------LLEPGP 115
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP- 269
E A ++R++L+ H +HRD+K N L E +K DFG++ +
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDT 172
Query: 270 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTEDGIFKEV 327
K VG+ +++APEV+K+ + ++D+WS+G IT I L G P + + +
Sbjct: 173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLG-ITAIELARGEPPHSELHPMKVLFLI 231
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 382
+N P + S K+FV+ L K+P R TA + L H ++ +
Sbjct: 232 PKNNPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSY 283
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 1e-42
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 53/297 (17%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DF I + LG G FG ++ + NG A+K ++K ++ VE E +L
Sbjct: 7 DFQ----ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 62
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+ H +++ + F+D +++ M+ EGGEL F +RK R+
Sbjct: 63 VT-HPFIIRMWGTFQDAQQIFMIMDYIEGGEL-----------------FSLLRKSQRFP 104
Query: 213 EKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLSDFIK 268
A ++ A +LH +++RD+KPEN L D + +K TDFG +
Sbjct: 105 NPVAKFYAAEV--CLALEYLHSKDIIYRDLKPENILL-----DKNGHIKITDFGFA---- 153
Query: 269 PGKKFQDIV----GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI 323
K D+ G+ Y+APEV+ K D WS G++ Y +L G PF+D
Sbjct: 154 --KYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT 211
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 375
++++L + F P P + KD + +L+ +D RL +HPW +E
Sbjct: 212 YEKILNAELRF---P-PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 156 bits (395), Expect = 4e-42
Identities = 80/333 (24%), Positives = 140/333 (42%), Gaps = 52/333 (15%)
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
N L+ +++ K+ + DF+ I K++G G FG V K
Sbjct: 42 NNSPLRREKNILEYLEWAKPFTSKVKQMRLHRE-DFE----ILKVIGRGAFGEVAVVKLK 96
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178
A+K + K +M+ + E +L + + + AF+DDN +Y+ M+
Sbjct: 97 NADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITTLHYAFQDDNNLYLVMDY 155
Query: 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLV 236
GG+LL L + + R E+ A + +M V A +H V
Sbjct: 156 YVGGDLL----------------TLLSKFEDRLPEEMARFYLAEM--VIAIDSVHQLHYV 197
Query: 237 HRDMKPENFLFKSAKEDSS--LKATDFGLSDFIKPGKKFQDI-----VGSAYYVAPEVLK 289
HRD+KP+N L D + ++ DFG + + VG+ Y++PE+L+
Sbjct: 198 HRDIKPDNILM-----DMNGHIRLADFGSC---LKLMEDGTVQSSVAVGTPDYISPEILQ 249
Query: 290 RKS------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-I 342
GPE D WS+GV Y +L G PF+ ++ + +++ +K F+ + +
Sbjct: 250 AMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDV 309
Query: 343 SNSAKDFVKKLLVKDPRARLTAAQAL---SHPW 372
S +AKD +++L+ RL HP+
Sbjct: 310 SENAKDLIRRLICSREH-RLGQNGIEDFKKHPF 341
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 5e-42
Identities = 71/296 (23%), Positives = 120/296 (40%), Gaps = 37/296 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G K +G +AVK+I + + + ++ ++ + +V+FY
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRST--VDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
A + +I MEL D+ + S D E+ +
Sbjct: 88 GALFREGDCWICMELMSTS--FDKFYKYVYSV-----------LDDVIPEEILGKITLAT 134
Query: 224 LRVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 279
++ A HL ++HRD+KP N L + +K DFG+S + K +D G
Sbjct: 135 VK--ALNHLKENLKIIHRDIKPSNILLDRSGN---IKLCDFGISGQLVDSIAKTRD-AGC 188
Query: 280 AYYVAPEVLKRKSGPE-----SDVWSIGVITYI-LLCGRRPF--WDKTEDGIFKEVLRNK 331
Y+APE + + + SDVWS+G IT L GR P+ W+ D + + V +
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLG-ITLYELATGRFPYPKWNSVFDQLTQVVKGDP 247
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
P S S +FV L KD R + L HP++ E ++++
Sbjct: 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM---YEERAVEVA 300
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 6e-42
Identities = 79/321 (24%), Positives = 124/321 (38%), Gaps = 60/321 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQAL 153
+Y +G G +G + ++ G VA+KK E + +I IA+ RE+++L+ L
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIAL----REIRMLKQL 59
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N+V F +++ E C D + + R E
Sbjct: 60 K-HPNLVNLLEVFRRKRRLHLVFEYC------DHTVLHEL-----------DRYQRGVPE 101
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK 272
+ Q L+ CH H +HRD+KPEN L S +K DFG + P
Sbjct: 102 HLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITK---HSVIKLCDFGFARLLTGPSDY 158
Query: 273 FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--- 325
+ D V + +Y +PE+L + GP DVW+IG + + L P W D ++
Sbjct: 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCV-FAELLSGVPLWPGKSDVDQLYLIRK 217
Query: 326 ----------EVLRNKPDFR-------------RKPWPSISNSAKDFVKKLLVKDPRARL 362
+V F +P+IS A +K L DP RL
Sbjct: 218 TLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERL 277
Query: 363 TAAQALSHPWVREGGDASEIP 383
T Q L HP+ + ++
Sbjct: 278 TCEQLLHHPYFENIREIEDLA 298
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 6e-42
Identities = 89/375 (23%), Positives = 145/375 (38%), Gaps = 72/375 (19%)
Query: 39 HHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRY 98
T+ + ++ + +K + K S+ T V G+ D + Y
Sbjct: 2 SGRPRTTSFAESCKPVQQPSAFGSMKVSR-DKDGSKVTTVVATPGQGPDR----PQEVSY 56
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K++G+G FG Y A +G+ VA+KK+ ++K RE++I++ L H N
Sbjct: 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKL-DHCN 108
Query: 159 VVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+V+ F +D+ Y+ + ++ T+ R SR
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--------------ETVYRV----ARHYSRAK 150
Query: 213 EKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ + V+ Q+ R A H G+ HRD+KP+N L LK DFG + +
Sbjct: 151 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLV 208
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIF 324
G+ + S YY APE++ DVWS G + LL +P + D D +
Sbjct: 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 267
Query: 325 K--EVL-----------------RNKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRA 360
+ +VL P + PW P A +LL P A
Sbjct: 268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 327
Query: 361 RLTAAQALSHPWVRE 375
RLT +A +H + E
Sbjct: 328 RLTPLEACAHSFFDE 342
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 3e-41
Identities = 75/308 (24%), Positives = 118/308 (38%), Gaps = 51/308 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG G +G +G +AVK+I N + + ++ I V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ----KRLLMDLDISMRTVDCPFTVT 70
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
FY A + V+I MEL + LD+ ++ I K E +
Sbjct: 71 FYGALFREGDVWICMELMDTS--LDKFYKQV------------IDKGQTIPEDILGKIAV 116
Query: 222 QMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 277
+++ A HLH ++HRD+KP N L + + +K DFG+S + K D
Sbjct: 117 SIVK--ALEHLHSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDID-A 170
Query: 278 GSAYYVAPEVLKRKSGPE-----SDVWSIGVITYI-LLCGRRPF--WDKTEDGIFKEVLR 329
G Y+APE + + + SD+WS+G IT I L R P+ W + + V
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLG-ITMIELAILRFPYDSWGTPFQQLKQVVEE 229
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVL 389
P + S DF + L K+ + R T + + HP+ D
Sbjct: 230 PSPQLPADKF---SAEFVDFTSQCLKKNSKERPTYPELMQHPFFT---LHESKGTD---- 279
Query: 390 NNMRQFVK 397
+ FVK
Sbjct: 280 --VASFVK 285
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 5e-41
Identities = 84/353 (23%), Positives = 135/353 (38%), Gaps = 70/353 (19%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-- 129
+ +GV + F + +Y L+G G +G +K G VA+KK
Sbjct: 5 HHHHSSGVDLGTENLYFQSME----KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLE 60
Query: 130 -EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 188
+ +KM+ IA+ RE+K+L+ L HEN+V + Y+ E +
Sbjct: 61 SDDDKMVKKIAM----REIKLLKQLR-HENLVNLLEVCKKKKRWYLVFEFVD----HT-- 109
Query: 189 LAKMISTTLTSAWFLAIRKDSRYTEKDAAVV---VRQMLRVAAECHLHGLVHRDMKPENF 245
+ + + D VV + Q++ CH H ++HRD+KPEN
Sbjct: 110 ILDDL--------------ELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENI 155
Query: 246 LFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIG 302
L +K DFG + PG+ + D V + +Y APE+L K G DVW+IG
Sbjct: 156 LVSQ---SGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIG 212
Query: 303 VITYILLCGRRPFW--DKTEDGIFK-------------EVLRNKPDFR------------ 335
+ + P + D D ++ E+ P F
Sbjct: 213 CL-VTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREP 271
Query: 336 -RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 387
+ +P +S D KK L DP R A+ L H + + G A ++
Sbjct: 272 LERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQELQ 324
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 146 bits (372), Expect = 3e-40
Identities = 70/311 (22%), Positives = 136/311 (43%), Gaps = 57/311 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQAL 153
+Y + +G G +G + A ++ + VA+K++ + + +P A+ RE+ +L+ L
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL----REICLLKEL 58
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H+N+V+ ++ D + + E C+ D L K + +
Sbjct: 59 K-HKNIVRLHDVLHSDKKLTLVFEFCD----QD--LKKYFDS-----------CNGDLDP 100
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK 272
+ + Q+L+ CH ++HRD+KP+N L + LK +FGL+ F P +
Sbjct: 101 EIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR---NGELKLANFGLARAFGIPVRC 157
Query: 273 FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--E 326
+ V + +Y P+VL + D+WS G I L RP + + +D + +
Sbjct: 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR 217
Query: 327 VL-----------RNKPDFRRKP-----------WPSISNSAKDFVKKLLVKDPRARLTA 364
+L PD++ P P ++ + +D ++ LL +P R++A
Sbjct: 218 LLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISA 277
Query: 365 AQALSHPWVRE 375
+AL HP+ +
Sbjct: 278 EEALQHPYFSD 288
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 9e-40
Identities = 76/342 (22%), Positives = 139/342 (40%), Gaps = 60/342 (17%)
Query: 72 NSRRQTGVI-PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI- 129
+S +QTG + G+R + D + +G++ G G G + + G +AVK++
Sbjct: 5 SSGKQTGYLTIGGQRYQAEIN-DLEN---LGEM-GSGTCGQVWKMRFRKTGHVIAVKQMR 59
Query: 130 -EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 188
NK + + ++ ++ +V+ + F + V+IAMEL +++
Sbjct: 60 RSGNKEEN----KRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTC--AEKL 113
Query: 189 LAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENF 245
R E+ + +++ A +L G++HRD+KP N
Sbjct: 114 K---------------KRMQGPIPERILGKMTVAIVK--ALYYLKEKHGVIHRDVKPSNI 156
Query: 246 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE------SDVW 299
L + +K DFG+S + K G A Y+APE + + +DVW
Sbjct: 157 LLDERGQ---IKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVW 213
Query: 300 SIGVITYI-LLCGRRPFWDKTEDGIFK---EVLRNKPDFRRKPWPSISNSAKDFVKKLLV 355
S+G I+ + L G+ P+ K F+ +VL+ +P S + FVK L
Sbjct: 214 SLG-ISLVELATGQFPY--KNCKTDFEVLTKVLQEEPP-LLPGHMGFSGDFQSFVKDCLT 269
Query: 356 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 397
KD R R + L H +++ + +D + + K
Sbjct: 270 KDHRKRPKYNKLLEHSFIKR---YETLEVD------VASWFK 302
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 3e-39
Identities = 78/313 (24%), Positives = 126/313 (40%), Gaps = 57/313 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQAL 153
RY LG G +G Y A D + VA+K+I E + +P A+ REV +L+ L
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI----REVSLLKEL 90
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N+++ + ++ +++ E E D L K + +
Sbjct: 91 Q-HRNIIELKSVIHHNHRLHLIFEYAE----ND--LKKYMDKN------------PDVSM 131
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFIKPG 270
+ + Q++ CH +HRD+KP+N L A E LK DFGL+ F P
Sbjct: 132 RVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI 191
Query: 271 KKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIF 324
++F + + +Y PE+L R D+WSI I +L F +E IF
Sbjct: 192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIF 251
Query: 325 K-----------------EVLRNKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARL 362
+ + ++ P FR K + + D + +L DP R+
Sbjct: 252 EVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRI 311
Query: 363 TAAQALSHPWVRE 375
+A AL HP+
Sbjct: 312 SAKNALEHPYFSH 324
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 5e-39
Identities = 84/354 (23%), Positives = 141/354 (39%), Gaps = 71/354 (20%)
Query: 64 KTKQHQKTNSRRQTGVIPCGKR-----TDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
T + N + + K +D + + YT K++G+G FG + A
Sbjct: 3 FTMSNAPLNGVKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLV 62
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------EDDNYV 172
+ VA+KK+ ++K RE++I++ + H NVV F +D+ ++
Sbjct: 63 ESD-EVAIKKVLQDK-------RFKNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEVFL 113
Query: 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAA 228
+ +E T+ A R ++ + ++++ Q+LR A
Sbjct: 114 NLVLEYVP--------------ETVYRA----SRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 229 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 288
H G+ HRD+KP+N L LK DFG + + G+ + S YY APE++
Sbjct: 156 YIHSIGICHRDIKPQNLLLDP--PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELI 213
Query: 289 --KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK-------EVLRNK---- 331
D+WS G + L+ G+ F ++ I K E ++
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY 273
Query: 332 -----PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
P R P+ P A D + +LL P ARLTA +AL HP+ E
Sbjct: 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 6e-39
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 29/278 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG G FG ++A K A+K ++K+ +++ VE E ++L H +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
+ F+ ++ ME GG+L I+ ++ A
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDL-----------------MYHIQSCHKFDLSRATFYAA 125
Query: 222 QMLRVAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 279
+++ + + H G+V+RD+K +N L D +K DFG+ + + K G+
Sbjct: 126 EII-LGLQFLHSKGIVYRDLKLDNILLDK---DGHIKIADFGMCKENMLGDAKTNTFCGT 181
Query: 280 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 338
Y+APE+L + D WS GV+ Y +L G+ PF + E+ +F + + P + R
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR-- 239
Query: 339 WPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVRE 375
+ AKD + KL V++P RL + HP RE
Sbjct: 240 --WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 6e-39
Identities = 70/279 (25%), Positives = 114/279 (40%), Gaps = 25/279 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
+ RY I LG G Y+A D +VA+K I ++ +REV L
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
+ H+N+V + E+D+ Y+ ME EG L + I +
Sbjct: 69 S-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-----------------ESHGPLSV 110
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
A Q+L H +VHRD+KP+N L + +LK DFG++ +
Sbjct: 111 DTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLT 167
Query: 274 QD--IVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLR 329
Q ++G+ Y +PE + +D++SIG++ Y +L G PF +T I K +
Sbjct: 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQD 227
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
+ P+ I S + + + KD R Q +
Sbjct: 228 SVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEM 266
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 4e-38
Identities = 84/331 (25%), Positives = 133/331 (40%), Gaps = 74/331 (22%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVK---REVK 148
+ Y +G G +G A DK +G++VA+KK+ + +++ K RE+
Sbjct: 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-------FAKRAYRELL 75
Query: 149 ILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWF 202
+L+ + HENV+ + F + Y+ M + L K++
Sbjct: 76 LLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVM------PFMQTDLQKIMGLKF----- 123
Query: 203 LAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 262
+E+ +V QML+ H G+VHRD+KP N ED LK DFG
Sbjct: 124 ---------SEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA---VNEDCELKILDFG 171
Query: 263 LSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF----- 315
L+ V + +Y APEV+ D+WS+G I +L G+ F
Sbjct: 172 LARHADAEMT--GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 229
Query: 316 ---WDK--------TEDGIF-------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 353
+ + + K +++ P RK + P S A D ++K+
Sbjct: 230 LDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKM 289
Query: 354 LVKDPRARLTAAQALSHPWVREGGDASEIPI 384
L D RLTAAQAL+HP+ D E
Sbjct: 290 LELDVDKRLTAAQALTHPFFEPFRDPEEETE 320
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 7e-38
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 39/312 (12%)
Query: 73 SRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN 132
S ++ I G D +F+ ++LG G FG +A K GD AVK ++K+
Sbjct: 5 SSKEGNGIGVNSSNRLGID-NFE----FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKD 59
Query: 133 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKM 192
++ VE E +IL H + + + F+ + ++ ME GG+L
Sbjct: 60 VILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL-------- 111
Query: 193 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAK 251
I+K R+ E A +++ A H G+++RD+K +N L
Sbjct: 112 ---------MFHIQKSRRFDEARARFYAAEII-SALMFLHDKGIIYRDLKLDNVLLDH-- 159
Query: 252 EDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 309
+ K DFG+ + I G G+ Y+APE+L+ GP D W++GV+ Y +L
Sbjct: 160 -EGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML 218
Query: 310 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TA 364
CG PF + ED +F+ +L ++ + + A +K + K+P RL
Sbjct: 219 CGHAPFEAENEDDLFEAILNDEVVYPT----WLHEDATGILKSFMTKNPTMRLGSLTQGG 274
Query: 365 AQAL-SHPWVRE 375
A+ HP+ +E
Sbjct: 275 EHAILRHPFFKE 286
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 7e-38
Identities = 86/344 (25%), Positives = 150/344 (43%), Gaps = 45/344 (13%)
Query: 42 RNDTTHKHQ---HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRY 98
R + T Q +++A ++ + + V + + +F+
Sbjct: 96 REEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMN-EFE--- 151
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H
Sbjct: 152 -YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF 209
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+ +F+ + + ME GGEL F + ++ ++E A
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFSEDRARF 252
Query: 219 VVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQ 274
++ V+A +LH +V+RD+K EN + D +K TDFGL + IK G +
Sbjct: 253 YGAEI--VSALDYLHSEKNVVYRDLKLENLMLDK---DGHIKITDFGLCKEGIKDGATMK 307
Query: 275 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L +
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 367
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPW 372
F R ++ AK + LL KDP+ RL + H +
Sbjct: 368 FPR----TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 147 bits (371), Expect = 1e-37
Identities = 76/350 (21%), Positives = 141/350 (40%), Gaps = 40/350 (11%)
Query: 35 RRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDF 94
N + + ++ Q+ + TK ++ + + G R DF
Sbjct: 285 EYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLT-DF 343
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
+ +LG G FG ++ K + AVK ++K+ +I VE E ++L
Sbjct: 344 N----FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
+ + ++ F+ + +Y ME GG+L I++ R+ E
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-----------------MYHIQQVGRFKEP 442
Query: 215 DAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK 271
A ++ L G+++RD+K +N + S + +K DFG+ + I G
Sbjct: 443 HAVFYAAEI--AIGLFFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGV 497
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
+ G+ Y+APE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ +
Sbjct: 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH 557
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPWVRE 375
+ + S+S A K L+ K P RL H + R
Sbjct: 558 NVAYPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 1e-37
Identities = 63/338 (18%), Positives = 114/338 (33%), Gaps = 68/338 (20%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
+ + + +G G FG + A +K + A+K+I +A E V REVK L L
Sbjct: 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR--ELAREKVMREVKALAKL 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL---------- 203
H +V+++NA+ + E+ E + + S + A +
Sbjct: 62 -EHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFST 120
Query: 204 ------------------------------AIRKDSRYTEKDAAVVVR---QMLRVAAEC 230
+ + +++ V + Q+
Sbjct: 121 KNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFL 180
Query: 231 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------------DFIKPGKKFQDIV 277
H GL+HRD+KP N F D +K DFGL + V
Sbjct: 181 HSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237
Query: 278 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ Y++PE + + + D++S+G+I + LL ++ I +V K
Sbjct: 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR--IITDVRNLKFP--- 292
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
+ V+ +L P R A + +
Sbjct: 293 LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 1e-37
Identities = 84/310 (27%), Positives = 131/310 (42%), Gaps = 57/310 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQAL 153
+Y + +G G +G Y A + G+ A+KKI EK +P + RE+ IL+ L
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTI----REISILKEL 57
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N+VK Y+ + + E + D L K++ +
Sbjct: 58 K-HSNIVKLYDVIHTKKRLVLVFEHLD----QD--LKKLLDV-----------CEGGLES 99
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK 272
A + Q+L A CH ++HRD+KP+N L E LK DFGL+ F P +K
Sbjct: 100 VTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRK 156
Query: 273 FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK- 325
+ + + +Y AP+VL +K D+WS+G I ++ G F +E IF+
Sbjct: 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI 216
Query: 326 ----------------EVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAA 365
+ N + PW + S D + K+L DP R+TA
Sbjct: 217 LGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAK 276
Query: 366 QALSHPWVRE 375
QAL H + +E
Sbjct: 277 QALEHAYFKE 286
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 2e-37
Identities = 71/288 (24%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+LG G FG ++ K + AVK ++K+ +I VE E ++L + +
Sbjct: 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 85
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
++ F+ + +Y ME GG+L I++ R+ E A
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDL-----------------MYHIQQVGRFKEPHAVF--- 125
Query: 222 QMLRVAAEC-----HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKF 273
AAE L G+++RD+K +N + S + +K DFG+ + I G
Sbjct: 126 ----YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTT 178
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ G+ Y+APE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ +
Sbjct: 179 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV 238
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPWVRE 375
+ + S+S A K L+ K P RL H + R
Sbjct: 239 AYPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 2e-37
Identities = 72/310 (23%), Positives = 123/310 (39%), Gaps = 56/310 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALA 154
Y LG G + Y K + VA+K+I E + A+ REV +L+ L
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI----REVSLLKDLK 58
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N+V ++ + + + E + D L + + +
Sbjct: 59 -HANIVTLHDIIHTEKSLTLVFEYLD----KD--LKQYLDD-----------CGNIINMH 100
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKF 273
+ + + Q+LR A CH ++HRD+KP+N L E LK DFGL+ P K +
Sbjct: 101 NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPTKTY 157
Query: 274 QDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV 327
+ V + +Y P++L + D+W +G I Y + GR F T IF+ +
Sbjct: 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217
Query: 328 ----------LRNKPDFR------------RKPWPSISNSAKDFVKKLLVKDPRARLTAA 365
+ + +F+ P + + D + KLL + R R++A
Sbjct: 218 GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAE 277
Query: 366 QALSHPWVRE 375
A+ HP+
Sbjct: 278 DAMKHPFFLS 287
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 2e-37
Identities = 95/359 (26%), Positives = 140/359 (38%), Gaps = 97/359 (27%)
Query: 83 GKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE--KNKMILPIAV 140
KR + + + + LLG G +G AT K G+ VA+KKIE +
Sbjct: 2 PKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL------ 51
Query: 141 EDVK---REVKILQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAKM 192
RE+KIL+ HEN++ +N E+ N VYI EL+ L ++
Sbjct: 52 -FALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQ------ELMQTDLHRV 103
Query: 193 IST-TLTSA---WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFL 246
IST L+ +F+ Y Q LR A LH ++HRD+KP N L
Sbjct: 104 ISTQMLSDDHIQYFI-------Y----------QTLR--AVKVLHGSNVIHRDLKPSNLL 144
Query: 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA-----------YYVAPEVL--KRKSG 293
+ LK DFGL+ I +Y APEV+ K
Sbjct: 145 ---INSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYS 201
Query: 294 PESDVWSIGVITYILLCGR--------------------RPFWDKTEDGIF----KEVLR 329
DVWS G I L R P D I +E ++
Sbjct: 202 RAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIK 261
Query: 330 NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
+ P + P P ++ D ++++LV DP R+TA +AL HP+++ D ++ P
Sbjct: 262 SLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPE 320
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 2e-37
Identities = 89/341 (26%), Positives = 131/341 (38%), Gaps = 81/341 (23%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK---REVKILQ 151
RY K LG G G + A D RVA+KKI VK RE+KI++
Sbjct: 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQ------SVKHALREIKIIR 63
Query: 152 ALAGHENVVKFYNAF--------------EDDNYVYIAMELCEGGELLDRILAKMISTTL 197
L H+N+VK + + N VYI E E L +L +
Sbjct: 64 RL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEE 120
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS 255
+ F+ Y Q+LR ++H ++HRD+KP N + ED
Sbjct: 121 HARLFM-------Y----------QLLR--GLKYIHSANVLHRDLKPANLFINT--EDLV 159
Query: 256 LKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILL 309
LK DFGL+ + P + + + +Y +P +L D+W+ G I +L
Sbjct: 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 219
Query: 310 CGRRPF--------WDK--------TEDGI------FKEVLRNKPDFRRKPW----PSIS 343
G+ F E+ +RN KP P IS
Sbjct: 220 TGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGIS 279
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
A DF++++L P RLTA +ALSHP++ + PI
Sbjct: 280 REAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEPI 320
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 143 bits (361), Expect = 3e-37
Identities = 83/340 (24%), Positives = 137/340 (40%), Gaps = 82/340 (24%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVK---REVK 148
+RY K +G G G A D VA+KK+ + N+ K RE+
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT-------HAKRAYRELV 113
Query: 149 ILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWF 202
+++ + H+N++ N F E+ VY+ M EL+D L ++I L
Sbjct: 114 LMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVM------ELMDANLCQVIQMEL----- 161
Query: 203 LAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 262
+ + ++ QML H G++HRD+KP N + K D +LK DFG
Sbjct: 162 ---------DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV---VKSDCTLKILDFG 209
Query: 263 LSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF------ 315
L+ V + YY APEV L D+WS+G I ++ + F
Sbjct: 210 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 269
Query: 316 --WDK--------TEDGIFK------EVLRNKPDFRRKPWPSI----------------S 343
W+K + + K + N+P + +P + +
Sbjct: 270 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA 329
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
+ A+D + K+LV DP R++ AL HP++ D +E+
Sbjct: 330 SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE 369
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 3e-37
Identities = 83/280 (29%), Positives = 132/280 (47%), Gaps = 36/280 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AF+ + + ME GGEL F + ++ +TE+ A
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGEL-----------------FFHLSRERVFTEERARFYGA 112
Query: 222 QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 278
++ V+A +LH +V+RD+K EN + D +K TDFGL + I G + G
Sbjct: 113 EI--VSALEYLHSRDVVYRDIKLENLMLDK---DGHIKITDFGLCKEGISDGATMKTFCG 167
Query: 279 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 337
+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR- 226
Query: 338 PWPSISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPW 372
++S AK + LL KDP+ RL + + H +
Sbjct: 227 ---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 6e-37
Identities = 80/317 (25%), Positives = 130/317 (41%), Gaps = 61/317 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPI-AVEDVKREVKILQ 151
++ + LG+G + Y +K G VA+K++ K+ P A+ RE+ +++
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAI----REISLMK 58
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
L HEN+V+ Y+ +N + + E + D L K + +
Sbjct: 59 ELK-HENIVRLYDVIHTENKLTLVFEFMD----ND--LKKYMDSRTVGN------TPRGL 105
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPG 270
Q+L+ A CH + ++HRD+KP+N L + LK DFGL+ F P
Sbjct: 106 ELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPV 162
Query: 271 KKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIF 324
F V + +Y AP+VL R D+WS G I ++ G+ F + IF
Sbjct: 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF 222
Query: 325 K-------------EVLRN-KPDFRRKP------------WPSISNSAKDFVKKLLVKDP 358
L P+ +++P + + DF+ LL +P
Sbjct: 223 DIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNP 282
Query: 359 RARLTAAQALSHPWVRE 375
RL+A QAL HPW E
Sbjct: 283 DMRLSAKQALHHPWFAE 299
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 6e-37
Identities = 84/314 (26%), Positives = 131/314 (41%), Gaps = 60/314 (19%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPI-AVEDVKREVKI 149
+RY LG GQF Y A DK VA+KKI + K + A+ RE+K+
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL----REIKL 65
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
LQ L+ H N++ +AF + + + + E D L +I
Sbjct: 66 LQELS-HPNIIGLLDAFGHKSNISLVFDFME----TD--LEVIIKD-----------NSL 107
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIK 268
T + L+ H H ++HRD+KP N L E+ LK DFGL+ F
Sbjct: 108 VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGS 164
Query: 269 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWD-KTE----D 321
P + + V + +Y APE+L R G D+W++G I LL R PF ++
Sbjct: 165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLT 223
Query: 322 GIFKEV----------LRNKPDFRR-KPW---------PSISNSAKDFVKKLLVKDPRAR 361
IF+ + + + PD+ K + + + D ++ L + +P AR
Sbjct: 224 RIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCAR 283
Query: 362 LTAAQALSHPWVRE 375
+TA QAL +
Sbjct: 284 ITATQALKMKYFSN 297
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 8e-37
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DF K++G G FG +A KA AVK ++K ++ + + E +L
Sbjct: 39 DFH----FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK 94
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H +V + +F+ + +Y ++ GGEL F ++++ +
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGEL-----------------FYHLQRERCFL 137
Query: 213 EKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS-DFI 267
E A ++ +A +LH +V+RD+KPEN L DS + TDFGL + I
Sbjct: 138 EPRARFYAAEI--ASALGYLHSLNIVYRDLKPENILL-----DSQGHIVLTDFGLCKENI 190
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
+ G+ Y+APEVL ++ D W +G + Y +L G PF+ + ++
Sbjct: 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN 250
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL----TAAQALSHPW 372
+L + P+I+NSA+ ++ LL KD RL + SH +
Sbjct: 251 ILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF 296
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 1e-36
Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 58/311 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQAL 153
+Y + +G G +G Y A D G VA+K+I + +P A+ RE+ +L+ L
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAI----REISLLKEL 76
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H N+V + + + + E E D L K++ + +
Sbjct: 77 H-HPNIVSLIDVIHSERCLTLVFEFME----KD--LKKVLDE-----------NKTGLQD 118
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK 272
+ + Q+LR A CH H ++HRD+KP+N L S D +LK DFGL+ F P +
Sbjct: 119 SQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRS 175
Query: 273 FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKE 326
+ V + +Y AP+VL +K D+WSIG I ++ G+ F T+ IF
Sbjct: 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI 235
Query: 327 V----------LRNKPDFR------------RKPWPSISNSAKDFVKKLLVKDPRARLTA 364
+ ++ P ++ P D + +L DP R++A
Sbjct: 236 LGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISA 295
Query: 365 AQALSHPWVRE 375
A++HP+ ++
Sbjct: 296 RDAMNHPYFKD 306
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 1e-36
Identities = 51/151 (33%), Positives = 89/151 (58%), Gaps = 11/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +EE+ L++ F ID D +G+I+ +E++ L + + +L ES + +++ A D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR-VGSELMESEIKDLMDAADIDK 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 526
G +D+ EF+AAT+H+++LE + +L +AF FD D G+IT +E++ GL
Sbjct: 60 SGTIDYGEFIAATVHLNKLEREE----NLV--SAFSYFDKDGSGYITLDEIQQACKDFGL 113
Query: 527 K-GSIDPLLEEADIDKDGRISLSEFRRLLRT 556
ID +++E D D DG+I EF ++R
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 3e-13
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L+ EE +L F D D +G I+L+E++QA L + + ++++ ID + DG
Sbjct: 78 LEREE--NLVSAFSYFDKDGSGYITLDEIQQACKDF---GLDDIHIDDMIKEIDQDNDGQ 132
Query: 473 VDFSEFVA----ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 524
+D+ EF A + + +LR A D + I H
Sbjct: 133 IDYGEFAAMMRKRKGNGGIGRRTMRKTLNLR--DALGLVDNGSNQVIEGYFKHHHH 186
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 1e-36
Identities = 88/368 (23%), Positives = 146/368 (39%), Gaps = 92/368 (25%)
Query: 66 KQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVA 125
H + ++ + F D RYT +G G +G A D N RVA
Sbjct: 4 HHHMAAAAAAGPEMV---RGQVF----DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVA 56
Query: 126 VKKIE--KNKMILPIAVEDVK---REVKILQALAGHENVVKFYNAF-----EDDNYVYIA 175
+KKI +++ + RE+KIL HEN++ + E VYI
Sbjct: 57 IKKISPFEHQT-------YCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIV 108
Query: 176 MELCEGGELLDRILAKMI-STTLTSA---WFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 231
+L ++ L K++ + L++ +FL Y Q+LR +
Sbjct: 109 QDL------METDLYKLLKTQHLSNDHICYFL-------Y----------QILR--GLKY 143
Query: 232 LH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAP 285
+H ++HRD+KP N L LK DFGL+ P V + +Y AP
Sbjct: 144 IHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 286 EVL--KRKSGPESDVWSIGVITYILLCGRRPF--------WDK--------TEDGIF--- 324
E++ + D+WS+G I +L R F + +++ +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 325 ----KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376
+ L + P + PW P+ + A D + K+L +P R+ QAL+HP++ +
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
Query: 377 GDASEIPI 384
D S+ PI
Sbjct: 321 YDPSDEPI 328
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 4e-36
Identities = 76/336 (22%), Positives = 129/336 (38%), Gaps = 78/336 (23%)
Query: 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
+ R+ + ++ G G FG + +K+ G VA+KK+ ++ RE+
Sbjct: 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-------FRNREL 67
Query: 148 KILQALA--GHENVVKFYNAF-------EDDNYVYIAMELCEGGELLDRILAKMISTTLT 198
+I+Q LA H N+V+ + F D Y+ + ME TL
Sbjct: 68 QIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--------------DTLH 113
Query: 199 SAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHL--HGLVHRDMKPENFLFKSAKE 252
R R ++++ Q++R HL + HRD+KP N L +
Sbjct: 114 RC----CRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN--EA 167
Query: 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLC 310
D +LK DFG + + P + + S YY APE++ + D+WS+G I ++
Sbjct: 168 DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML 227
Query: 311 GRRPFWDKTEDG------IFKEVL-----------------RNKPDFRRKPW-------- 339
G F + ++ I + VL + + + PW
Sbjct: 228 GEPIF--RGDNSAGQLHEIVR-VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHS 284
Query: 340 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ A D + LL P R+ +AL HP+ E
Sbjct: 285 LKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 5e-36
Identities = 85/341 (24%), Positives = 135/341 (39%), Gaps = 82/341 (24%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVK---REVK 148
+RY K +G G G A D VA+KK+ + N+ K RE+
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT-------HAKRAYRELV 76
Query: 149 ILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWF 202
+++ + H+N++ N F E+ VYI M EL+D L ++I L
Sbjct: 77 LMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVM------ELMDANLCQVIQMELD---- 125
Query: 203 LAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 262
R + ++ QML H G++HRD+KP N + K D +LK DFG
Sbjct: 126 -----HERM-----SYLLYQMLCGIKHLHSAGIIHRDLKPSNIV---VKSDCTLKILDFG 172
Query: 263 LSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF------ 315
L+ V + YY APEV L D+WS+G I ++ G F
Sbjct: 173 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI 232
Query: 316 --WDK--------TEDGIFK------EVLRNKPDFRRKPWPSI----------------S 343
W+K + + K + N+P + + + +
Sbjct: 233 DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 292
Query: 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
+ A+D + K+LV D R++ +AL HP++ D SE
Sbjct: 293 SQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA 333
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 7e-36
Identities = 85/361 (23%), Positives = 138/361 (38%), Gaps = 77/361 (21%)
Query: 65 TKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
H + R T +T + + RY +G G +G A D G RV
Sbjct: 2 AHHHHHHSQERPTFYRQELNKTIW----EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRV 57
Query: 125 AVKKIEK---NKMILPIAVEDVK---REVKILQALAGHENVVKFYNAF------EDDNYV 172
AVKK+ + + + K RE+++L+ + HENV+ + F E+ N V
Sbjct: 58 AVKKLSRPFQSII-------HAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDV 109
Query: 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL 232
Y+ L L+ I+ K + T+ ++ Q+LR H
Sbjct: 110 YLVTHLMGAD--LNNIV-----------------KCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 233 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KR 290
++HRD+KP N ED LK DFGL+ + V + +Y APE++
Sbjct: 151 ADIIHRDLKPSNLA---VNEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNWM 205
Query: 291 KSGPESDVWSIGVITYILLCGR-----------------------RPFWDKTEDGIFKEV 327
D+WS+G I LL GR K +
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 265
Query: 328 LRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
+++ + + + A D ++K+LV D R+TAAQAL+H + + D + P
Sbjct: 266 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEP 325
Query: 384 I 384
+
Sbjct: 326 V 326
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 7e-36
Identities = 59/286 (20%), Positives = 104/286 (36%), Gaps = 55/286 (19%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKMIL-----PIAVEDVKREVK 148
+Y + + HG G+ Y+A D+ NG V +K L A E +
Sbjct: 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLK-------GLVHSGDAEAQAMAMAERQ 131
Query: 149 ILQALAGHENVVKFYNAFEDDNY-----VYIAMELCEGGELLDRILAKMISTTLTSAWFL 203
L + H ++V+ +N E + YI ME G L
Sbjct: 132 FLAEVV-HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK--------------- 175
Query: 204 AIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
+ +A + ++L + H GLV+ D+KPEN + + LK D G
Sbjct: 176 ----GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML----TEEQLKLIDLGA 227
Query: 264 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323
F + G+ + APE+++ +D++++G L +G
Sbjct: 228 V---SRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTR-----NGR 279
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
+ + L P +S +++ + DPR R T A+ +S
Sbjct: 280 YVDGLPEDD-----PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMS 320
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 7e-36
Identities = 76/316 (24%), Positives = 121/316 (38%), Gaps = 60/316 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPI-AVEDVKREVKIL 150
RY +G G +G Y A D +G VA+K + LPI V REV +L
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTV----REVALL 65
Query: 151 QAL--AGHENVVKFY-----NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL 203
+ L H NVV+ + + + V + E + D L +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QD--LRTYLDK-------- 111
Query: 204 AIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
+ ++RQ LR H + +VHRD+KPEN L S ++K DFGL
Sbjct: 112 --APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGL 166
Query: 264 SDFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-- 320
+ +V + +Y APEVL + D+WS+G I + + F +E
Sbjct: 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226
Query: 321 --DGIFKEV----------LRNKPDFRRKPW---------PSISNSAKDFVKKLLVKDPR 359
IF + + P P P + S + ++L +P
Sbjct: 227 QLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPH 286
Query: 360 ARLTAAQALSHPWVRE 375
R++A +AL H ++ +
Sbjct: 287 KRISAFRALQHSYLHK 302
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 9e-36
Identities = 87/439 (19%), Positives = 141/439 (32%), Gaps = 128/439 (29%)
Query: 45 TTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLL 104
++H+ Q + + Q + ++ P D RY I L+
Sbjct: 2 SSHEAAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLI 61
Query: 105 GHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK------REVKILQALAGHEN 158
G G +G+ A DK VA+KKI + ED+ RE+ IL L H++
Sbjct: 62 GTGSYGHVCEAYDKLEKRVVAIKKILR-------VFEDLIDCKRILREIAILNRL-NHDH 113
Query: 159 VVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
VVK + E + +Y+ +E+ + D K+ R TE
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIAD----SD--FKKL------------FRTPVYLTE 155
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
++ +L H G++HRD+KP N L +D S+K DFGL+ + +
Sbjct: 156 LHIKTLLYNLLVGVKYVHSAGILHRDLKPANCL---VNQDCSVKVCDFGLARTVDYPENG 212
Query: 274 QDIVGSA----------------------------YYVAPEVL--KRKSGPESDVWSIGV 303
+ + +Y APE++ + DVWSIG
Sbjct: 213 NSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGC 272
Query: 304 I----------TYILLCGRRPF-------------------------------------- 315
I R P
Sbjct: 273 IFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILG 332
Query: 316 ------WDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAA 365
+ E K +R P P+ S A +K++LV +P R+T
Sbjct: 333 TPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITIN 392
Query: 366 QALSHPWVREGGDASEIPI 384
+ L+HP+ +E A
Sbjct: 393 ECLAHPFFKEVRIAEVETN 411
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 9e-36
Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 44/289 (15%)
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMILPI-AVEDVKREVKILQALAGHE 157
++LG G +G + T G A+K ++K ++ K E IL+ H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE-VKHP 81
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V AF+ +Y+ +E GGEL F+ + ++ + E A
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGEL-----------------FMQLEREGIFMEDTAC 124
Query: 218 VVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS-DFIKPGKK 272
+ ++ A HLH G+++RD+KPEN + + +K TDFGL + I G
Sbjct: 125 FYLAEI--SMALGHLHQKGIIYRDLKPENIML-----NHQGHVKLTDFGLCKESIHDGTV 177
Query: 273 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331
G+ Y+APE+L R D WS+G + Y +L G PF + ++L+ K
Sbjct: 178 THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPWVRE 375
+ P P ++ A+D +KKLL ++ +RL A +HP+ R
Sbjct: 238 LNL---P-PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 1e-35
Identities = 71/350 (20%), Positives = 146/350 (41%), Gaps = 53/350 (15%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIG-----KL 103
H H H + + T ++ +G+ + + + ++
Sbjct: 5 HHHHHHD-----YDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRV 59
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G + + K A++ ++K + ++ V+ E + + + H +V +
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ F+ ++ ++ +E GG+L +++ + E+ A ++
Sbjct: 120 SCFQTESRLFFVIEYVNGGDL-----------------MFHMQRQRKLPEEHARFYSAEI 162
Query: 224 LRVAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 281
+A H G+++RD+K +N L S + +K TD+G+ + ++PG G+
Sbjct: 163 S-LALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPN 218
Query: 282 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW---------DKTEDGIFKEVLRNK 331
Y+APE+L+ + G D W++GV+ + ++ GR PF TED +F+ +L +
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 278
Query: 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQAL-SHPWVRE 375
R S+S A +K L KDP+ RL T + HP+ R
Sbjct: 279 IRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 1e-35
Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 43/292 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+++G G + + K A+K ++K + ++ V+ E + + + H +V
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
++ F+ ++ ++ +E GG+L +++ + E+ A
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDL-----------------MFHMQRQRKLPEEHARFYSA 117
Query: 222 QMLRVAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 279
++ +A H G+++RD+K +N L S + +K TD+G+ + ++PG G+
Sbjct: 118 EIS-LALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGT 173
Query: 280 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW---------DKTEDGIFKEVLR 329
Y+APE+L+ + G D W++GV+ + ++ GR PF TED +F+ +L
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 233
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQAL-SHPWVRE 375
+ R S+S A +K L KDP+ RL T + HP+ R
Sbjct: 234 KQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 1e-35
Identities = 72/294 (24%), Positives = 115/294 (39%), Gaps = 50/294 (17%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-------PIAVEDVKRE 146
RY +G++LG G ++A D + VAVK +L P +RE
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVK-------VLRADLARDPSFYLRFRRE 62
Query: 147 VKILQALAG--HENVVKFYNAFEDDN----YVYIAMELCEGGELLDRILAKMISTTLTSA 200
Q A H +V Y+ E + YI ME +G L D +
Sbjct: 63 A---QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------------ 107
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 260
+ T K A V+ + H +G++HRD+KP N + +++K D
Sbjct: 108 -----HTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMD 159
Query: 261 FGL----SDFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPF 315
FG+ +D + ++G+A Y++PE SDV+S+G + Y +L G PF
Sbjct: 160 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Query: 316 WDKTEDGI-FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
+ + ++ V R P +S V K L K+P R A +
Sbjct: 220 TGDSPVSVAYQHV-REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 1e-35
Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 20/174 (11%)
Query: 402 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEE---------MRQALAKDLPWK 452
++A++ + + + FD +D++ NG I+L+E + A K
Sbjct: 3 SKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 62
Query: 453 LKESRVLEILQAIDCNTDGLVDFSEFVA-----ATLHVHQLEEHDSEKWHLRSQAAFEKF 507
+ V + + F +F+ AT + + ++ A F+ F
Sbjct: 63 RHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF 122
Query: 508 DIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 555
D D G IT +E + +G+ S + D+D G + + E R
Sbjct: 123 DKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 176
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 6e-10
Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 394 QFVK-YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 452
QF+ + +L L+ A FD D D +G+I+L+E + K
Sbjct: 87 QFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG-KISGIS 145
Query: 453 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 494
+ + D + G +D E H+ D E
Sbjct: 146 PSQEDCEATFRHCDLDNAGDLDVDEMTR--QHLGFWYTLDPE 185
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 141 bits (356), Expect = 1e-35
Identities = 71/348 (20%), Positives = 129/348 (37%), Gaps = 44/348 (12%)
Query: 44 DTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIG-- 101
+ H + Q +Q + Q I K T F K+ + +
Sbjct: 130 EHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMN 189
Query: 102 -----KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+++G G FG Y G A+K ++K ++ + E +L ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 157 EN--VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
+ +V AF + + ++L GG+L + + ++E
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDL-----------------HYHLSQHGVFSEA 292
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 274
D +++ H +V+RD+KP N L E ++ +D GL+ KK
Sbjct: 293 DMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDF-SKKKPH 348
Query: 275 DIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWD---KTEDGIFKEVLR 329
VG+ Y+APEVL++ +D +S+G + + LL G PF K + I + L
Sbjct: 349 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPW 372
+ S S + ++ LL +D RL A + P+
Sbjct: 409 MAVELP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 2e-35
Identities = 65/343 (18%), Positives = 122/343 (35%), Gaps = 89/343 (25%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI----EKNKMILPIAVEDVKREV 147
++ IGK G +A K G+ V V++I N+M+ ++ E+
Sbjct: 25 GCYELLTVIGK--GFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMV-----TFLQGEL 77
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
+ + H N+V + F DN +++ G D ++ +
Sbjct: 78 HVSKLFN-HPNIVPYRATFIADNELWVVTSFMAYGSAKD-LICTHFMDGM---------- 125
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS- 264
E A +++ +L+ A ++H G VHR +K + L D + + +
Sbjct: 126 ----NELAIAYILQGVLK--ALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNL 176
Query: 265 DFIKPGKK-------FQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYI-LLCGRR 313
I G++ + V +++PEVL++ +SD++S+G IT L G
Sbjct: 177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG-ITACELANGHV 235
Query: 314 PFWD------------------------------------KTEDGIFKEVLRNKPDFRRK 337
PF D G+ + + P
Sbjct: 236 PFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNG 295
Query: 338 PWPSI------SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
PS S FV++ L ++P AR +A+ L+H + +
Sbjct: 296 DSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 338
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 2e-35
Identities = 83/353 (23%), Positives = 156/353 (44%), Gaps = 59/353 (16%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDK-----DFDRRYTIG 101
H H H+ + + + + T G+ + +F+ +
Sbjct: 4 HHHHHEEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFE----LL 59
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMILPI-AVEDVKREVKILQALAGHE 157
K+LG G +G ++ + G A+K ++K ++ E + E ++L+ +
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V + AF+ + +++ ++ GGEL F + + R+TE +
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGEL-----------------FTHLSQRERFTEHEVQ 162
Query: 218 VVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS--DFIKPGK 271
+ V ++ V A HLH G+++RD+K EN L DS+ + TDFGLS +
Sbjct: 163 IYVGEI--VLALEHLHKLGIIYRDIKLENILL-----DSNGHVVLTDFGLSKEFVADETE 215
Query: 272 KFQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYILLCGRRPFW----DKTEDGIF 324
+ D G+ Y+AP++++ D WS+GV+ Y LL G PF ++ I
Sbjct: 216 RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275
Query: 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPW 372
+ +L+++P + P +S AKD +++LL+KDP+ RL A + H +
Sbjct: 276 RRILKSEPPY---P-QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 2e-35
Identities = 76/285 (26%), Positives = 124/285 (43%), Gaps = 44/285 (15%)
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
K+LG G FG ++ + A+K ++K + K E IL H
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK-ATLKVRDRVRTKMERDILVE-VNHPF 87
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+VK + AF+ + +Y+ ++ GG+L F + K+ +TE+D
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDL-----------------FTRLSKEVMFTEEDVKF 130
Query: 219 VVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS-DFIKPGKKF 273
+ ++ A HLH G+++RD+KPEN L D +K TDFGLS + I KK
Sbjct: 131 YLAEL--ALALDHLHSLGIIYRDLKPENILL-----DEEGHIKLTDFGLSKESIDHEKKA 183
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
G+ Y+APEV+ R+ +D WS GV+ + +L G PF K +L+ K
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL 243
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPW 372
+S A+ ++ L ++P RL + H +
Sbjct: 244 GMP----QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-35
Identities = 84/391 (21%), Positives = 144/391 (36%), Gaps = 98/391 (25%)
Query: 57 AKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVAT 116
K ++L+ + Q+ +R + ++ D DF++ I +L G G G + +
Sbjct: 1 GKKLEELELDEQQR---KRLEAFLTQKQKVGELKDDDFEK---ISEL-GAGNGGVVFKVS 53
Query: 117 DKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174
K +G +A K I E I + RE+++L +V FY AF D + I
Sbjct: 54 HKPSGLVMARKLIHLEIKPAIR----NQIIRELQVLHECN-SPYIVGFYGAFYSDGEISI 108
Query: 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 234
ME +GG L ++K R E+ V +++ +L
Sbjct: 109 CMEHMDGGSLDQ-----------------VLKKAGRIPEQILGKVSIAVIK--GLTYLRE 149
Query: 235 ---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEV 287
++HRD+KP N L S E +K DFG+S G+ + VG+ Y++PE
Sbjct: 150 KHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 201
Query: 288 LKRKS-GPESDVWSIGVITYILLCGRRPF--------------------WDKTEDGIFKE 326
L+ +SD+WS+G+ + GR P +
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261
Query: 327 VLRNKPDFRRKPWPSI--------------------SNSAKDFVKKLLVKDPRARLTAAQ 366
NK +P +I S +DFV K L+K+P R Q
Sbjct: 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQ 321
Query: 367 ALSHPWVREGGDASEIPIDISVLNNMRQFVK 397
+ H +++ + +D ++
Sbjct: 322 LMVHAFIKR---SDAEEVD------FAGWLC 343
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 3e-35
Identities = 78/343 (22%), Positives = 138/343 (40%), Gaps = 81/343 (23%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVE 141
+T + + Y + +G G +G A D G +VA+KK+ + +++
Sbjct: 18 KTAW----EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL------- 66
Query: 142 DVK---REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKM 192
K RE+++L+ + HENV+ + F +D Y+ M L +++
Sbjct: 67 FAKRAYRELRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTD--LGKLM--- 120
Query: 193 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSA 250
K + E +V QML+ ++H G++HRD+KP N
Sbjct: 121 --------------KHEKLGEDRIQFLVYQMLK--GLRYIHAAGIIHRDLKPGNLA---V 161
Query: 251 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 308
ED LK DFGL+ V + +Y APEV+ + D+WS+G I +
Sbjct: 162 NEDCELKILDFGLARQADSEMT--GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM 219
Query: 309 LCGR-----------------------RPFWDKTEDGIFKEVLRNKPDFRRKPW----PS 341
+ G+ F + + K ++ P+ +K + +
Sbjct: 220 ITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTN 279
Query: 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
S A + ++K+LV D R+TA +AL+HP+ D + P
Sbjct: 280 ASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQ 322
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 4e-35
Identities = 61/338 (18%), Positives = 115/338 (34%), Gaps = 71/338 (21%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-----VEDVK--- 144
YT+ + + G +G D G VA+K++ K
Sbjct: 19 AMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVL 77
Query: 145 REVKILQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
RE+++L H N++ + F + +Y+ EL + LA++I
Sbjct: 78 REIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTEL------MRTDLAQVIHD---- 126
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLK 257
+ + + + +L LH G+VHRD+ P N L +++ +
Sbjct: 127 -------QRIVISPQHIQYFMYHILL--GLHVLHEAGVVHRDLHPGNIL---LADNNDIT 174
Query: 258 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF 315
DF L+ V +Y APE++ + D+WS G + + R+
Sbjct: 175 ICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
Query: 316 W--------------------DKTEDGIFKEVLRN-----KPDFRRKPW----PSISNSA 346
+ + R+ + + W P+ A
Sbjct: 234 FRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVA 293
Query: 347 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
D + K+L +P+ R++ QAL HP+ D ++
Sbjct: 294 LDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTE 331
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 1e-34
Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 25/277 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A G A KK+EK ++ E +IL VV
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL-EKVNSRFVVS 248
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
A+E + + + + L GG+L + + + + E A
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLK---------------FHIYHMGQAGFPEARAVFYAA 293
Query: 222 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 281
++ + H +V+RD+KPEN L ++ +D GL+ + G+ + VG+
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDD---HGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 282 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 340
Y+APEV+K + D W++G + Y ++ G+ PF + + +EV R + +
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSE 410
Query: 341 SISNSAKDFVKKLLVKDPRARL-----TAAQALSHPW 372
S A+ +LL KDP RL +A + HP
Sbjct: 411 RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 2e-34
Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 17/176 (9%)
Query: 397 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQAL--------AKD 448
+Y R + L + L+ L +FD D+D +G + ++E+ A D
Sbjct: 14 RYLRSVGNQWQFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATD 73
Query: 449 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR-----SQAA 503
+ V + ++V A + E + S +
Sbjct: 74 EQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSY 133
Query: 504 FEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 555
++ D D DG + +EL+ + E+AD DK G++ +E L R
Sbjct: 134 YDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELVHLFR 189
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 6e-07
Identities = 10/81 (12%), Positives = 25/81 (30%), Gaps = 15/81 (18%)
Query: 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRM---------------HTGLKGSIDPLLEEA 537
K R F+ FD+D DG + +E+ ++ ++
Sbjct: 31 HPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHK 90
Query: 538 DIDKDGRISLSEFRRLLRTAS 558
++ + ++ R +
Sbjct: 91 GVEPVNGLLREDWVEANRVFA 111
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-34
Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 26/187 (13%)
Query: 393 RQFVKYSRLKQFALRALASTLDD----EELADLRDQFDAIDVDKNGSISLEEMRQALAKD 448
+ K ++ ++ A + + E + F D ++ G + +E+ +
Sbjct: 18 DKDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEV 77
Query: 449 LPWKLKESRVLEILQ---------AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499
L SRV +I + G DF EF+ L + + + L
Sbjct: 78 LKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFF----ELT 133
Query: 500 SQAAFEKFDIDRDGFITPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRR 552
F++ D + + EE + L +E D + G ++ EF
Sbjct: 134 --VMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAA 191
Query: 553 LLRTASI 559
+
Sbjct: 192 WASAVKL 198
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 136 bits (343), Expect = 2e-34
Identities = 73/284 (25%), Positives = 121/284 (42%), Gaps = 36/284 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG + KA G A KK+ K ++ + E KIL A +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVHSRFIVS 249
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR 221
AFE + + M + GG++ I + + + E A
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHI-------------YNVDEDNPGFQEPRAIFYTA 296
Query: 222 QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 278
Q+ V+ HLH +++RD+KPEN L D +++ +D GL+ + K + G
Sbjct: 297 QI--VSGLEHLHQRNIIYRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 279 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPD 333
+ ++APE+L + D +++GV Y ++ R PF + E + + VL
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPW 372
+ K S ++KDF + LL KDP RL + +HP
Sbjct: 412 YPDK----FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 5e-34
Identities = 78/358 (21%), Positives = 136/358 (37%), Gaps = 95/358 (26%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
++Y++GK LG G FG D +G R A+KK+ ++ RE+ I++ L
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVLD 58
Query: 155 GHENVVKFYNAF--------------------------------------EDDNYVYIAM 176
H N++K + F + Y+ + M
Sbjct: 59 -HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIM 117
Query: 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 236
E TL IR ++ + Q+ R H G+
Sbjct: 118 EYVP--------------DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGIC 163
Query: 237 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGP 294
HRD+KP+N L S +D++LK DFG + + P + + S +Y APE++ + P
Sbjct: 164 HRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTP 221
Query: 295 ESDVWSIGVITYILLCGRRPFWDKTEDG------IFKEVL-----------------RNK 331
D+WSIG + L+ G+ F E I + ++
Sbjct: 222 SIDLWSIGCVFGELILGKPLF--SGETSIDQLVRIIQ-IMGTPTKEQMIRMNPHYTEVRF 278
Query: 332 PDFRRKPW----PSISNS-AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
P + K W P + S A D ++++L +P R+ +A++HP+ ++ E +
Sbjct: 279 PTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEV 336
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 2e-33
Identities = 60/289 (20%), Positives = 112/289 (38%), Gaps = 44/289 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKI----EKNKMILPIAVEDVKREVKILQALA 154
K +G G FG + + VA+K + + + + ++ +REV I+ L
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N+VK Y + + ME G+L R+L K + L +
Sbjct: 82 -HPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLML--------- 129
Query: 215 DAAVVVRQMLRVAAECHLHG----LVHRDMKPENFLFKSAKEDS--SLKATDFGLSDFIK 268
D A + ++ +VHRD++ N +S E++ K DFGLS
Sbjct: 130 DIA---LGI------EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV 180
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325
++G+ ++APE + + ++D +S +I Y +L G PF + + I
Sbjct: 181 HSVS--GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVK----DPRARLTAAQALSH 370
+ + R P+I ++ ++ DP+ R + +
Sbjct: 239 INMIREEGLR----PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-33
Identities = 71/314 (22%), Positives = 123/314 (39%), Gaps = 58/314 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATD-KANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQA 152
+Y +G G +G + A D K G VA+K++ + + +P+ + REV +L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTI----REVAVLRH 67
Query: 153 L--AGHENVVKFY-----NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
L H NVV+ + + + + + + E + D L +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QD--LTTYLDK---------- 111
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
+ + ++ Q+LR H H +VHRD+KP+N L S+ + +K DFGL+
Sbjct: 112 VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLAR 168
Query: 266 FIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTE---- 320
+V + +Y APEVL + D+WS+G I + + F ++
Sbjct: 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
Query: 321 DGIFK-------------------EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 361
I K I KD + K L +P R
Sbjct: 229 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
Query: 362 LTAAQALSHPWVRE 375
++A ALSHP+ ++
Sbjct: 289 ISAYSALSHPYFQD 302
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 2e-33
Identities = 64/282 (22%), Positives = 106/282 (37%), Gaps = 39/282 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-------PIAVEDVKREVKI 149
Y + +L+G G G Y A D VA+K ++ P+ ++RE +
Sbjct: 35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALK-------LMSETLSSDPVFRTRMQREART 87
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
L +VV ++ E D +Y+ M L G +L + R+
Sbjct: 88 AGRLQ-EPHVVPIHDFGEIDGQLYVDMRLINGVDLAAML-----------------RRQG 129
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
A +VRQ+ H G HRD+KPEN L D DFG++
Sbjct: 130 PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV---SADDFAYLVDFGIASATTD 186
Query: 270 GKKFQ--DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
K Q + VG+ YY+APE + +D++++ + Y L G P+ +
Sbjct: 187 EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAH 246
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
+ + P P I + + + + K+P R L
Sbjct: 247 INQAIPRPSTVR-PGIPVAFDAVIARGMAKNPEDRYVTCGDL 287
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 7e-33
Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 18/190 (9%)
Query: 370 HPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAID 429
P V + PI S + + ++ L +T+ ++ + F +D
Sbjct: 2 QPPVANFCLWNLQPIQGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVD 61
Query: 430 VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489
D++G++ + E+ +L L +++ D + +G + F EF+A +
Sbjct: 62 RDRSGTLEINELMMGQFP-GGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM---- 116
Query: 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS--IDPLLEEADIDKDGR 544
E F R G + P E+ G + LL
Sbjct: 117 ----ELA----YNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFARGMAF 168
Query: 545 ISLSEFRRLL 554
L+ + +
Sbjct: 169 CDLNCWIAIC 178
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 2e-10
Identities = 13/106 (12%), Positives = 34/106 (32%), Gaps = 19/106 (17%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 475
+ + + F ++G++ E+ AL + L + + + R +L + D
Sbjct: 114 KFMELAYNLFVMNARARSGTLEPHEILPAL-QQLGFYINQ-RTSLLLHRLFARGMAFCDL 171
Query: 476 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID-----RDGFIT 516
+ ++A Q A++ ++ F
Sbjct: 172 NCWIAICAFAAQTRS------------AYQMIFMNPYYGPMKPFNP 205
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 1e-07
Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 14/80 (17%)
Query: 484 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--------GSIDPLLE 535
++ + + F D DR G + EL G + ++
Sbjct: 41 LLNTIPLDQYTRI----YQWFMGVDRDRSGTLEINELM--MGQFPGGIRLSPQTALRMMR 94
Query: 536 EADIDKDGRISLSEFRRLLR 555
D D +G IS EF + +
Sbjct: 95 IFDTDFNGHISFYEFMAMYK 114
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 8e-33
Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 54/282 (19%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+ H N
Sbjct: 27 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRKTR-HVN 81
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
++ F I + CEG L L +
Sbjct: 82 ILLFMGYSTAPQL-AIVTQWCEGSSLYH---------------HLHASETK--------F 117
Query: 219 VVRQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIK 268
+++++ +A + H ++HRD+K N ED+++K DFGL+
Sbjct: 118 EMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWS 174
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKSGPE----SDVWSIGVITYILLCGRRPFWDKT-EDGI 323
+F+ + GS ++APEV++ + SDV++ G++ Y L+ G+ P+ + D I
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK----DPRAR 361
+ V R + ++ +K+L+ + R
Sbjct: 235 IEMVGRG---SLSPDLSKVRSNCPKRMKRLMAECLKKKRDER 273
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 1e-32
Identities = 69/276 (25%), Positives = 111/276 (40%), Gaps = 51/276 (18%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+ +++G G FG A + VA+K+IE + E++ L + H N
Sbjct: 11 EVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESER-----KAFIVELRQLSRVN-HPN 62
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+VK Y A + V + ME EGG L + + AA
Sbjct: 63 IVKLYGACLNP--VCLVMEYAEGGSLYN-----------------VLHGAEPLPYYTAAH 103
Query: 219 VVRQMLRVA-AECHLH-----GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
+ L+ + +LH L+HRD+KP N L + LK DFG + I+
Sbjct: 104 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL--VAGGTVLKICDFGTACDIQ--TH 159
Query: 273 FQDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWD--KTEDGIFKEVLR 329
+ GSA ++APEV + + E DV+S G+I + ++ R+PF + I V
Sbjct: 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN 219
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLV----KDPRAR 361
R P + + ++ L+ KDP R
Sbjct: 220 GT---R----PPLIKNLPKPIESLMTRCWSKDPSQR 248
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 1e-32
Identities = 79/411 (19%), Positives = 138/411 (33%), Gaps = 129/411 (31%)
Query: 67 QHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAV 126
H +S + + G + Y I L+G G +GY Y+A DK VA+
Sbjct: 2 HHHHHHSSGRENLYFQGI-KNV----HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAI 56
Query: 127 KKIEK---NKMILPIAVEDVK---REVKILQALAGHENVVKFYNAF-----EDDNYVYIA 175
KK+ + + + D K RE+ IL L + +++ Y+ + +YI
Sbjct: 57 KKVNRMFEDLI-------DCKRILREITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIV 108
Query: 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-- 233
+E+ + L ++ + TE+ ++ +L E +H
Sbjct: 109 LEIADSD--LKKL----------------FKTPIFLTEEHIKTILYNLLL--GENFIHES 148
Query: 234 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA------------- 280
G++HRD+KP N L +D S+K DFGL+ I K +
Sbjct: 149 GIIHRDLKPANCL---LNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLK 205
Query: 281 ----------YYVAPEVL--KRKSGPESDVWSIGVI----------TYILLCGRRPF--- 315
+Y APE++ + D+WS G I R P
Sbjct: 206 KQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPG 265
Query: 316 -------------WDKTEDG------IF-------------------KEVLRNKPDFRRK 337
+ IF + ++ P +
Sbjct: 266 SSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPI 325
Query: 338 PW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
PSIS+ + ++ +L +P R+T QAL HP++++
Sbjct: 326 NLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENF 376
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 1e-32
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 480
F IDV+ +G++S EE++ ++K E + I ++ID + +G +D +EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
Query: 481 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGSIDPLLEEAD 538
+ + D + L+ ++ D+D DG +T EE+ + + +AD
Sbjct: 61 FYGSIQGQDLSDDKI-GLK--VLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKAD 117
Query: 539 IDKDGRISLSEFRRLL 554
+ DG I+L EF
Sbjct: 118 ANGDGYITLEEFLEFS 133
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 7e-11
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 470
DD+ L+ + +DVD +G ++ EE+ K +V E + D N D
Sbjct: 69 DLSDDKI--GLKVLYKLMDVDGDGKLTKEEVTSFFK-----KHGIEKVAEQVMKADANGD 121
Query: 471 GLVDFSEFVA 480
G + EF+
Sbjct: 122 GYITLEEFLE 131
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 1e-32
Identities = 87/382 (22%), Positives = 139/382 (36%), Gaps = 122/382 (31%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVE 141
R D R+Y + K LG G +G + + D+ G+ VAVKKI N
Sbjct: 2 RVDR----HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNST------- 50
Query: 142 DVK---REVKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKMI-ST 195
D + RE+ IL L+GHEN+V N ++D VY+ + E D L +I +
Sbjct: 51 DAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME----TD--LHAVIRAN 104
Query: 196 TLTSA---WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSA 250
L + + Y Q+++ +LH GL+HRDMKP N L
Sbjct: 105 ILEPVHKQYVV-------Y----------QLIK--VIKYLHSGGLLHRDMKPSNIL---L 142
Query: 251 KEDSSLKATDFGLSDFIKPGKKFQDIVGSA----------------------YYVAPEVL 288
+ +K DFGLS ++ + + + +Y APE+L
Sbjct: 143 NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEIL 202
Query: 289 --KRKSGPESDVWSIGVITYILLCGRRPFW------------------------DKTEDG 322
K D+WS+G I +L +P + + +
Sbjct: 203 LGSTKYTKGIDMWSLGCILGEIL-CGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSP 261
Query: 323 IFKEVLRNKPDFRRKPW--------------------PSISNSAKDFVKKLLVKDPRARL 362
K ++ + + + A D + KLL +P R+
Sbjct: 262 FAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRI 321
Query: 363 TAAQALSHPWVREGGDASEIPI 384
+A AL HP+V + +E P
Sbjct: 322 SANDALKHPFVSIFHNPNEEPN 343
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 2e-32
Identities = 63/287 (21%), Positives = 112/287 (39%), Gaps = 59/287 (20%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
IG+L+G G+FG Y + +G+ VA++ I+ + ++ KREV + HEN
Sbjct: 36 EIGELIGKGRFGQVYHG--RWHGE-VAIRLIDIERDN-EDQLKAFKREVMAYRQTR-HEN 90
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
VV F A ++ I LC+G L + K +
Sbjct: 91 VVLFMGACMSPPHLAIITSLCKGRTLYS---------------VVRDAKIV--------L 127
Query: 219 VVRQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------D 265
V + ++A E H G++H+D+K +N + ++ + TDFGL
Sbjct: 128 DVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVLQ 183
Query: 266 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPE----------SDVWSIGVITYILLCGRRPF 315
+ K + G ++APE++++ S SDV+++G I Y L PF
Sbjct: 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
Query: 316 WDKTEDGIFKEVLRN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 361
+ + I ++ KP+ + D + + R
Sbjct: 244 KTQPAEAIIWQMGTGMKPNLSQIGMGK---EISDILLFCWAFEQEER 287
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 2e-32
Identities = 35/276 (12%), Positives = 68/276 (24%), Gaps = 51/276 (18%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
+ RY + G + A D A +VA+ ++ ++ +++ L +
Sbjct: 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI- 88
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
V + + + E GG L + D+ +
Sbjct: 89 DKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVA-------------------DTSPSPV 129
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 274
A ++ + A H G+ P D +
Sbjct: 130 GAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV---SIDGDVVLAYPA------------ 174
Query: 275 DIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
+ P+ D+ IG Y LL R P + R+
Sbjct: 175 -------TMPDA------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQ 221
Query: 335 RRKPW---PSISNSAKDFVKKLLVKDPRARLTAAQA 367
+P I + + D R +
Sbjct: 222 PIEPADIDRDIPFQISAVAARSVQGDGGIRSASTLL 257
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-32
Identities = 86/378 (22%), Positives = 130/378 (34%), Gaps = 97/378 (25%)
Query: 71 TNSRRQTGVIPCGKRTDFGYDKD-----------FDRRYTIGKLLGHGQFGYTYVATDKA 119
N++++ G+ G + GYD D RY + K++G G FG A D
Sbjct: 63 LNAKKRQGMT--GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHK 120
Query: 120 NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----NVVKFYNAFEDDNYVYI 174
VA+K + K A E++IL+ L + NV+ F N++ +
Sbjct: 121 VHQHVALKMVRNEKRFHRQA----AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176
Query: 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 234
EL L + + K ++ +L+ H +
Sbjct: 177 TFELL-SMNLYE---------------LIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220
Query: 235 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSG 293
++H D+KPEN L K S +K DFG S + ++ + S +Y APEV L + G
Sbjct: 221 IIHCDLKPENILLKQQG-RSGIKVIDFGSSCYE--HQRVYTYIQSRFYRAPEVILGARYG 277
Query: 294 PESDVWSIGVITYILLCGR----------------------------------------- 312
D+WS+G I LL G
Sbjct: 278 MPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKG 337
Query: 313 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA--------------KDFVKKLLVKDP 358
P + V+ N RR S DF+K+ L DP
Sbjct: 338 YPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDP 397
Query: 359 RARLTAAQALSHPWVREG 376
R+T QAL HPW+R
Sbjct: 398 AVRMTPGQALRHPWLRRR 415
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 3e-32
Identities = 67/273 (24%), Positives = 109/273 (39%), Gaps = 39/273 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
I + +G G FG + A + +G VAVK + + V + REV I++ L H N
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFH-AERVNEFLREVAIMKRLR-HPN 95
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V F A + I E G L + L L++ D
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD---------- 145
Query: 219 VVRQMLRVAAECHLHG----LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKF 273
V + M +LH +VHR++K N L + ++K DFGLS
Sbjct: 146 VAKGM------NYLHNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLSRLKASTFLSS 196
Query: 274 QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
+ G+ ++APEVL+ + S +SDV+S GVI + L ++P+ + + V
Sbjct: 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC- 255
Query: 333 DFRRKPWPSISNSAKDFVKKLLVK----DPRAR 361
+R I + V ++ +P R
Sbjct: 256 --KR---LEIPRNLNPQVAAIIEGCWTNEPWKR 283
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 3e-32
Identities = 73/279 (26%), Positives = 112/279 (40%), Gaps = 46/279 (16%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM-ILPIAVEDVKREVKILQALAGHE 157
T+ +++G G FG Y A GD VAVK + + +E+V++E K+ L H
Sbjct: 10 TLEEIIGIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HP 66
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
N++ + + + ME GG L + K I + W A
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW--------------AV 112
Query: 218 VVVRQMLRVAAECHLHG-----LVHRDMKPENFL-----FKSAKEDSSLKATDFGLSDFI 267
+ R M +LH ++HRD+K N L + LK TDFGL+
Sbjct: 113 QIARGM------NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW 166
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
K G+ ++APEV++ + SDVWS GV+ + LL G PF +
Sbjct: 167 HRTTK-MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG 225
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVK----DPRAR 361
V NK I ++ + KL+ DP +R
Sbjct: 226 VAMNK---LA---LPIPSTCPEPFAKLMEDCWNPDPHSR 258
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 4e-32
Identities = 35/165 (21%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 399 SRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 458
L S L +E+ ++ + F D++ +G + E++ A+ L ++L + +
Sbjct: 3 KNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKA-LGFELPKREI 61
Query: 459 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 518
L+++ D L+ + +F + ++ + D ++ AF+ FD D G I+ +
Sbjct: 62 LDLIDEYDSEGRHLMKYDDFY--IVMGEKILKRDPLD-EIK--RAFQLFDDDHTGKISIK 116
Query: 519 ELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 557
LR G + + ++EE D+D DG I+ +EF + +
Sbjct: 117 NLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTDS 161
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 7e-32
Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 29/198 (14%)
Query: 377 GDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSI 436
G P+ S ++ + ++ LRA + + L F +D D + S+
Sbjct: 3 GLVPRGPLG-SHMDAVDATME-------KLRAQCLSRGASGIQGLARFFRQLDRDGSRSL 54
Query: 437 SLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 496
+E RQ L L L ++ + + D N G +D EF+ A
Sbjct: 55 DADEFRQGL-AKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREA---- 109
Query: 497 HLRSQAAFEKFDIDRDGFITPEELR----------MHTGLKGS---IDPLLEEADI-DKD 542
+ AAF K D DG +T ++LR + +G + L+ D +KD
Sbjct: 110 VIA--AAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKD 167
Query: 543 GRISLSEFRRLLRTASIS 560
G+++L+EF+ S S
Sbjct: 168 GQVTLAEFQDYYSGVSAS 185
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 2e-31
Identities = 72/360 (20%), Positives = 129/360 (35%), Gaps = 89/360 (24%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
+ D RY + + LG G F ++A D N VA+K + +K+ A + E+K+L
Sbjct: 14 EPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAA----EDEIKLL 69
Query: 151 QAL----------AGHENVVKFYNAFE----DDNYVYIAMELCEGGELLDRILAKMISTT 196
Q + G +++K + F + +V + E+ G LL
Sbjct: 70 QRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLA---------- 118
Query: 197 LTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAK-- 251
+ + + +Q+L ++H G++H D+KPEN L +
Sbjct: 119 -----LIKKYEHRGIPLIYVKQISKQLLL--GLDYMHRRCGIIHTDIKPENVLMEIVDSP 171
Query: 252 -EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILL 309
+K D G + + + + + + + Y +PEV L G +D+WS + + L+
Sbjct: 172 ENLIQIKIADLGNACWY--DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI 229
Query: 310 CGRRPFWDKTEDGIFK---------EVL------------------------RNKPDFRR 336
G F K E+L RN +
Sbjct: 230 TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKF 289
Query: 337 KPWPSISNSA-----------KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 385
P + DF+ +L DPR R A ++HPW+++ EI +
Sbjct: 290 WPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVP 349
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 2e-31
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 392 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 451
M K + + L +E+ ++R+ FD D D +G+I +E++ A+ L +
Sbjct: 1 MSYKAKTVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRA-LGF 59
Query: 452 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 511
+ K+ + +++ ID + G +DF EF+ T+ ++ E DS + + AF FD D
Sbjct: 60 EPKKEEIKKMISEIDKDGSGTIDFEEFL--TMMTAKMGERDSRE-EIL--KAFRLFDDDN 114
Query: 512 DGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTASI 559
G IT ++LR G + + ++ EAD + D I EF R+++ S+
Sbjct: 115 SGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-31
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 529
+DF EF+ + + + + L F FD + DGFI EEL TG +
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELA--NCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 530 ---IDPLLEEADIDKDGRISLSEFRRLLR 555
I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 3e-31
Identities = 83/335 (24%), Positives = 123/335 (36%), Gaps = 69/335 (20%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D G +G G +G+ Y A K + A+K+IE I A RE+ +L+
Sbjct: 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSAC----REIALLRE 74
Query: 153 LAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
L H NV+ F D V++ + E D L +I S A +K +
Sbjct: 75 LK-HPNVISLQKVFLSHADRKVWLLFDYAE----HD--LWHIIKFHRAS---KANKKPVQ 124
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-SLKATDFGLS-DFIK 268
++ Q+L H + ++HRD+KP N L + +K D G + F
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 269 PGKKFQDIVGSA---YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG- 322
P K D+ +Y APE+L R D+W+IG I LL F + ED
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 244
Query: 323 ------------IFK-----------------EVLRNKPDFRRKPW-------------P 340
IF E DFRR +
Sbjct: 245 TSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKV 304
Query: 341 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ A ++KLL DP R+T+ QA+ P+ E
Sbjct: 305 KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE 339
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 4e-31
Identities = 87/342 (25%), Positives = 126/342 (36%), Gaps = 81/342 (23%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPI-AVEDVKREVKILQAL 153
+Y +G G FG + A + G +VA+KK+ E K PI A+ RE+KILQ L
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL----REIKILQLL 73
Query: 154 AGHENVVKFY--------NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
HENVV +Y+ + CE D LA ++S
Sbjct: 74 K-HENVVNLIEICRTKASPYNRCKGSIYLVFDFCE----HD--LAGLLSN---------- 116
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
++T + V++ +L H + ++HRDMK N L LK DFGL+
Sbjct: 117 -VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV---LKLADFGLAR 172
Query: 266 FIKPGKKFQDIVGSAY--------YVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF 315
K Q + Y Y PE+L +R GP D+W G I +
Sbjct: 173 AFSLAKNSQP---NRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 229
Query: 316 WDKTE----DGIFK-------------------EVLRNKPDFRRK-----PWPSISNSAK 347
TE I + E L +RK A
Sbjct: 230 QGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYAL 289
Query: 348 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVL 389
D + KLLV DP R+ + AL+H + +P D+ +
Sbjct: 290 DLIDKLLVLDPAQRIDSDDALNHDFFWS----DPMPSDLKGM 327
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 6e-31
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
+L EE+ +LR+ F D DK+G I+ ++ + + + + E ++E+ Q I+ N
Sbjct: 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNL 60
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKW---HLRSQAAFEKFDIDRDGFITPEELR--MHT 524
G VDF +FV +L ++ LR AF +FD + DG I+ ELR M
Sbjct: 61 GGHVDFDDFVELM--GPKLLAETADMIGVKELR--DAFREFDTNGDGEISTSELREAMRA 116
Query: 525 GLKGS-----IDPLLEEADIDKDGRISLSEFRRLLR 555
L I+ ++ + D++ DGR+ EF R++
Sbjct: 117 LLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 1e-30
Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 60
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 526
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + G
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEE-EIR--EAFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 527 KGS---IDPLLEEADIDKDGRISLSEFRRLLR 555
K + +D ++ EADID DG+++ EF +++
Sbjct: 116 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 4e-15
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
D EE ++R+ F D D NG IS E+R + +L KL + V E+++ D + DG V
Sbjct: 81 DSEE--EIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQV 137
Query: 474 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
++ EFV + + + + F
Sbjct: 138 NYEEFVQ--MMTAKGGGGGAAARKEVIRNKIRAIGKMARVFSV 178
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-30
Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 15/155 (9%)
Query: 415 DEELADLRDQFDAIDVDKNGSIS---LEEMRQALAKDLPWKLKESRVL-EILQAI----- 465
D + ++ F+ ID DK+G+I+ E M + AK+ K + ++VL + L +
Sbjct: 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61
Query: 466 -DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 524
+D + F+ + + + F D + D I+ +E +
Sbjct: 62 TAVAGGKGIDETTFINSMKEMVK-NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 525 GLKGS----IDPLLEEADIDKDGRISLSEFRRLLR 555
G+ G + D + DG +SL EF
Sbjct: 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 3e-11
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
L F A+D +++ +IS +E L ++ AID N DGL+
Sbjct: 89 KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM---LGLDKTMAPASFDAIDTNNDGLL 145
Query: 474 DFSEFVAATLHVHQLEEHDSEKW 496
EFV A + + K
Sbjct: 146 SLEEFVIAGSDFFMNDGDSTNKV 168
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 11/80 (13%), Positives = 22/80 (27%), Gaps = 17/80 (21%)
Query: 493 SEKWHLRSQAAFEKFDIDRDGFITPEEL----RMHTGLKGSIDPLLEE------------ 536
S+ W + + F + D D+DG IT + +
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 537 -ADIDKDGRISLSEFRRLLR 555
+ I + F ++
Sbjct: 61 LTAVAGGKGIDETTFINSMK 80
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 2e-30
Identities = 39/147 (26%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 474
+E+ ++R+ FD D D G+I ++E++ A+ L ++ K+ + +++ ID G ++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRA-LGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 475 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS-- 529
F +F+ T+ ++ E D+++ + AF+ FD D G I+ + L+ G +
Sbjct: 61 FGDFL--TVMTQKMSEKDTKE-EIL--KAFKLFDDDETGKISFKNLKRVAKELGENLTDE 115
Query: 530 -IDPLLEEADIDKDGRISLSEFRRLLR 555
+ +++EAD D DG +S EF R+++
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEFLRIMK 142
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 55.9 bits (136), Expect = 1e-09
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
D +E ++ F D D+ G IS + +++ K+L L + + E++ D + DG V
Sbjct: 76 DTKE--EILKAFKLFDDDETGKISFKNLKRVA-KELGENLTDEELQEMIDEADRDGDGEV 132
Query: 474 DFSEFVA 480
EF+
Sbjct: 133 SEQEFLR 139
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 3e-30
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
D +E+ L +F +D+D +GS+S+EE LP + V ++ D + +G V
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-----MSLPELQQNPLVQRVIDIFDTDGNGEV 55
Query: 474 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR----MHTG---- 525
DF EF+ + D E+ LR AF +D+D+DG+I+ EL M G
Sbjct: 56 DFKEFIEGVSQFSV--KGDKEQ-KLR--FAFRIYDMDKDGYISNGELFQVLKMMVGNNLK 110
Query: 526 ---LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASI 559
L+ +D + AD D DGRIS EF ++ I
Sbjct: 111 DTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDI 147
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 7e-30
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 407 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 465
+A L +E+ + + FD + ++GSIS +E+ + + L + E++ +
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQNPTPEELQEMIDEV 64
Query: 466 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---M 522
D + G VDF EF+ + + + + L F FD + DG+I EEL+
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS--DLFRMFDKNADGYIDLEELKIMLQ 122
Query: 523 HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 555
TG + I+ L+++ D + DGRI EF ++
Sbjct: 123 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 8e-30
Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 13/157 (8%)
Query: 408 ALASTLDDEELADLRDQFDAID-VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 466
S L ++ L F + + +G +S +++ L + L + +S + +++ D
Sbjct: 2 GDVSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIIL-EVLGIQQTKSTIRQLIDEFD 60
Query: 467 CNTDGLVDFSEFVAATLH--VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 521
+G +DF F ++ ++ LR AF +D + +G+I+ + +R
Sbjct: 61 PFGNGDIDFDSFKIIGARFLGEEVNPEQMQQ-ELR--EAFRLYDKEGNGYISTDVMREIL 117
Query: 522 MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 555
S +D +++E D D G + EF ++
Sbjct: 118 AELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 112 bits (284), Expect = 1e-29
Identities = 48/151 (31%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 526
+G +DF EF+ +L +++E DSE+ L AF+ FD D +G I+ ELR + G
Sbjct: 60 NGTIDFPEFL--SLMARKMKEQDSEE-ELI--EAFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 527 KGS---IDPLLEEADIDKDGRISLSEFRRLL 554
K + +D ++ EADID DG I+ EF R++
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 2e-29
Identities = 82/402 (20%), Positives = 141/402 (35%), Gaps = 100/402 (24%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGY-----DKDFDRRYTIGKL 103
H H H + ++ +++ V G D + + RY I L
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMSSHKKERKVYNDGYDDDNYDYIVKNGEKWMDRYEIDSL 61
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----N 158
+G G FG A D+ + VA+K I+ K L A + EV++L+ + H+
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA----QIEVRLLELMNKHDTEMKYY 117
Query: 159 VVKFYNAFEDDNYVYIAMELCEGG--ELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+V F N++ + E+ +LL + +S L RK
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNL-------TRK--------- 161
Query: 217 AVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 274
+QM ++H D+KPEN L + K S++K DFG S + G++
Sbjct: 162 --FAQQMCTALLFLATPELSIIHCDLKPENILLCNPK-RSAIKIVDFGSSCQL--GQRIY 216
Query: 275 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCG---------------------- 311
+ S +Y +PEV L D+WS+G I + G
Sbjct: 217 QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI 276
Query: 312 -----------RRPFWDKTEDGIF--KEVLRNKPDFRRKPWPSISNSAK----------- 347
R F++K DG + K+ K +++ + N
Sbjct: 277 PPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRA 336
Query: 348 --------------DFVKKLLVKDPRARLTAAQALSHPWVRE 375
D + ++L DP+ R+ AL H + ++
Sbjct: 337 GESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 5e-29
Identities = 29/163 (17%), Positives = 64/163 (39%), Gaps = 20/163 (12%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCN 468
+ + + F+ +DV+ NG ISL+EM + + L ++++ +
Sbjct: 10 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 69
Query: 469 TDGL-----VDFSEFVAATLHV-----HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 518
G+ D+ ++ + + +++ + A F+ D D++G IT +
Sbjct: 70 GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 129
Query: 519 ELRM---HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 555
E + G+ S + DID+ G++ + E R
Sbjct: 130 EWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 1e-11
Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 2/105 (1%)
Query: 394 QFVK-YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 452
+++ + +L L A FD +D D+NG+I+L+E + K
Sbjct: 83 AYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYT-KAAGII 141
Query: 453 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 497
E + D + G +D E L + EK +
Sbjct: 142 QSSEDCEETFRVCDIDESGQLDVDEMTRQHLGFWYTMDPACEKLY 186
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 3e-04
Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 16/78 (20%)
Query: 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM-----------HTGLKGSIDPLLEEA 537
+ D+ +W R + F D++ +G I+ +E+ T + EA
Sbjct: 7 SDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEA 66
Query: 538 DIDKDG-----RISLSEF 550
G +
Sbjct: 67 FFGGAGMKYGVETDWPAY 84
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 7e-29
Identities = 23/165 (13%), Positives = 53/165 (32%), Gaps = 15/165 (9%)
Query: 406 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--------DLPWKLKESR 457
+ + + L ++ + +DV +G IS E+ + +
Sbjct: 1 MPEITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQE 60
Query: 458 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH-LRSQAAFEKFDIDRDGFIT 516
L + + + E + + + ++S ++ D D+DG+++
Sbjct: 61 FLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVS 120
Query: 517 PEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 555
E + G D +K+G+IS EF +
Sbjct: 121 LPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 1e-28
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 28/187 (14%)
Query: 399 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
+ L+ L + ++ L +F ++D +NG++S E+ ++ + L +
Sbjct: 7 TLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN-PLGD- 64
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK----------WHLRSQAAFEK 506
I+ A + V+F F+ H +E+++ K + AF
Sbjct: 65 ---RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRL 121
Query: 507 FDIDRDGFITPEELR----MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLR 555
+D+D+D I+ +EL M G+ S D ++EAD D D IS +EF ++L
Sbjct: 122 YDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLE 181
Query: 556 TASISSR 562
+ +
Sbjct: 182 KVDVEQK 188
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-28
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
+ L +E++A+ ++ F D D +GSIS E+ + + L E+ V +++ ID +
Sbjct: 2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVM-RSLGLSPSEAEVADLMNEIDVDG 60
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 526
+ ++FSEF+ L QL+ +DSE+ L AF+ FD + DG I+ EL+ G
Sbjct: 61 NHAIEFSEFL--ALMSRQLKCNDSEQ-ELL--EAFKVFDKNGDGLISAAELKHVLTSIGE 115
Query: 527 KGS---IDPLLEEADIDKDGRISLSEFRRLLR 555
K + +D +L E D G I++ +F LL
Sbjct: 116 KLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 3e-28
Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 20/161 (12%)
Query: 415 DEELADLRDQFDAIDVDKNGSIS---LEEMRQALAKDLPWKLKESRVLEI---------- 461
L+ +FD D D NG++ E+ Q +A+ + V +
Sbjct: 3 AIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDY 62
Query: 462 -LQAIDCNTDGLVDFSEFVAATLHVHQL--EEHDSEKWHLRSQAAFEKFDIDRDGFITPE 518
+ +DG + +F+ T ++ E + + D + DG I +
Sbjct: 63 LAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINAD 122
Query: 519 ELRMHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLR 555
E G + D + +G +SL E +R
Sbjct: 123 EFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVR 163
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 1e-09
Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
+ ++ D + +G I+ +E L + ++ E +D N +G
Sbjct: 96 FNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTA---LGMSKAEAAEAFNQVDTNGNGE 152
Query: 473 VDFSEFVAA 481
+ E + A
Sbjct: 153 LSLDELLTA 161
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 3e-08
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 21/82 (25%)
Query: 493 SEKWHLRSQAAFEKFDIDRDGFITPEEL---------------------RMHTGLKGSID 531
+ R + F+++D D +G + + + G D
Sbjct: 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFD 61
Query: 532 PLLEEADIDKDGRISLSEFRRL 553
L +EA + DG ++ +F R+
Sbjct: 62 YLAKEAGVGSDGSLTEEQFIRV 83
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 5e-28
Identities = 30/148 (20%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 474
D+++++ ++ F+ D ++ G I+ E ++ L + +++ + E+ D +G +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQ-FGVRVEPAAFNEMFNEADATGNGKIQ 60
Query: 475 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS-- 529
F EF+ ++ ++++ SE LR AF FD + G+I L+ ++ G +
Sbjct: 61 FPEFL--SMMGRRMKQTTSED-ILR--QAFRTFDPEGTGYIPKAALQDALLNLGDRLKPH 115
Query: 530 -IDPLLEEADIDKDGRISLSEFRRLLRT 556
L + + G+I F + T
Sbjct: 116 EFAEFLGITETE-KGQIRYDNFINTMFT 142
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 52.1 bits (126), Expect = 3e-08
Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
E+ LR F D + G I ++ AL +L +LK E L + G +
Sbjct: 76 TSED--ILRQAFRTFDPEGTGYIPKAALQDAL-LNLGDRLKPHEFAEFLGITETE-KGQI 131
Query: 474 DFSEFVA 480
+ F+
Sbjct: 132 RYDNFIN 138
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-27
Identities = 47/282 (16%), Positives = 91/282 (32%), Gaps = 58/282 (20%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
L G + + G+ + VK ++ D E L+ + H N
Sbjct: 13 NFLTKLNENHSGELWKG--RWQGNDIVVKVLKVRDWS-TRKSRDFNEECPRLRIFS-HPN 68
Query: 159 VVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
V+ A + + + G L + +L + + +
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWMPYGSLYN-VLHEGTNFVVDQ----------------- 110
Query: 217 AVVVRQMLRVAAEC-----HLHGL----VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
Q ++ A + LH L + + + ED + + + +
Sbjct: 111 ----SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID---EDMTARISMADVKFSF 163
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKSGPE----SDVWSIGVITYILLCGRRPFWDKTEDGI 323
+ + + + +VAPE L++K +D+WS V+ + L+ PF D + I
Sbjct: 164 QSPGR----MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI 219
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLL----VKDPRAR 361
+V R P+I V KL+ +DP R
Sbjct: 220 GMKVALEG---LR---PTIPPGISPHVSKLMKICMNEDPAKR 255
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 2e-27
Identities = 56/262 (21%), Positives = 99/262 (37%), Gaps = 47/262 (17%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
G++LG G FG T + G+ + +K++ + +EVK+++ L H N
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLE-HPN 68
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
V+KF D + E +GG L + DS+Y
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRG---------------IIK-SMDSQYPWS---Q 109
Query: 219 VVRQMLRVAA--EC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------- 267
V +A+ H ++HRD+ N L +E+ ++ DFGL+ +
Sbjct: 110 RVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPE 166
Query: 268 -------KPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 319
KK +VG+ Y++APE++ R + DV+S G++ ++ D
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYL 226
Query: 320 EDGIFKEVLRNKPDFRRKPWPS 341
+ N F + P
Sbjct: 227 P--RTMDFGLNVRGFLDRYCPP 246
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 5e-27
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 20/163 (12%)
Query: 405 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 464
++ + +E F + +G +L E + L + + ++
Sbjct: 8 SIAGDQKAVPTQETHVWYRTF--MMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNT 65
Query: 465 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 521
D N DG VDF EF+AA + Q + KW F+ +D D +G I EL
Sbjct: 66 FDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKW------YFKLYDADGNGSIDKNELLDMF 119
Query: 522 ---------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
+ I+ + + DI+ DG ++L EF +
Sbjct: 120 MAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMA 162
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 9e-27
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 27/188 (14%)
Query: 397 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
+ + + L L +F A+D +K G +S +++Q A + L +
Sbjct: 7 HAAVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVN-PLGD- 64
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA-----------AFE 505
I+++ + VDF FV H +E+ D+E + AF+
Sbjct: 65 ---RIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQ 121
Query: 506 KFDIDRDGFITPEELR----MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLL 554
+D+DRDG I+ E+ + G++ + D ++EAD D DG +S EF + L
Sbjct: 122 LYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
Query: 555 RTASISSR 562
+ +
Sbjct: 182 EKMDVEQK 189
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 3e-08
Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 12/114 (10%)
Query: 392 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 451
+ F + L F D+D++G IS EM Q L +
Sbjct: 87 LAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV 146
Query: 452 KLKE----SRVLEILQAIDCNTDGLVDFSEFVAA--------TLHVHQLEEHDS 493
++ E + +Q D + DG V F EF + + + L+ H
Sbjct: 147 QVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQKMSIRILKHHHH 200
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 102 bits (258), Expect = 4e-26
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
D ++ + ++ F+ ID +++G I E++ LA + + E L+ + G
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS-MGKNPTD----EYLEGMMSEAPGP 55
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 529
++F+ F+ T+ +L D E +R AF FD + GFI + LR G + +
Sbjct: 56 INFTMFL--TMFGEKLNGTDPED-VIR--NAFACFDEEASGFIHEDHLRELLTTMGDRFT 110
Query: 530 ---IDPLLEEADIDKDGRISLSEFRRLLRTAS 558
+D + EA IDK G + EF R+L+ +
Sbjct: 111 DEEVDEMYREAPIDKKGNFNYVEFTRILKHGA 142
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 6e-26
Identities = 59/349 (16%), Positives = 104/349 (29%), Gaps = 91/349 (26%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
+ + + + +G G FG + N AVK + +N K E IL+ +
Sbjct: 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV-RNI---KKYTRSAKIEADILKKI 88
Query: 154 AGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
+ N+VK++ F +++ + E G L + + +
Sbjct: 89 QNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYE---------------IITRNNYN 132
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK------------------ 251
+ +D + ++L+ L H D+KPEN L
Sbjct: 133 GFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192
Query: 252 ----EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 306
+ + +K DFG + F I+ + Y APEV L SD+WS G +
Sbjct: 193 IYRTKSTGIKLIDFGCATFK--SDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250
Query: 307 ILLCG----------------------------------RRPFWDKTEDGIFKEVLRNKP 332
L G + ++
Sbjct: 251 ELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASS 310
Query: 333 DFRRKPWPSI--------SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
K DF+ +L DP R + A+ L H ++
Sbjct: 311 INSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 6e-26
Identities = 36/195 (18%), Positives = 73/195 (37%), Gaps = 26/195 (13%)
Query: 379 ASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISL 438
E ++ SV + + R + L S +EL L F +G ++
Sbjct: 27 LIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNEC--PSGVVNE 84
Query: 439 EEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498
E ++ ++ P + + A D + +G V F +F+ + + + W
Sbjct: 85 ETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNW-- 142
Query: 499 RSQAAFEKFDIDRDGFITPEELRM------------------HTGLKGSIDPLLEEADID 540
AF +DI++DG+IT EE+ + ++ ++ D +
Sbjct: 143 ----AFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKN 198
Query: 541 KDGRISLSEFRRLLR 555
KDG +++ EF +
Sbjct: 199 KDGVVTIDEFIESCQ 213
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 7e-26
Identities = 35/165 (21%), Positives = 63/165 (38%), Gaps = 15/165 (9%)
Query: 397 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
K R + S D+ E+ D ++ F ID + +G I +++R+ A +K
Sbjct: 3 KAKRRAAEGSSNVFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKN- 61
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
E L A+ G ++F+ F+ T+ +L+ D E + AF+ D D G I
Sbjct: 62 ---EELDAMIKEASGPINFTVFL--TMFGEKLKGADPED-VIM--GAFKVLDPDGKGSIK 113
Query: 517 PEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 555
L G + + I + D G + ++
Sbjct: 114 KSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVIT 158
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 8e-26
Identities = 80/346 (23%), Positives = 118/346 (34%), Gaps = 89/346 (25%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATD-KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
RY I LG G FG D KA G VAVK + KN E + E+++L+
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV-KNV---DRYCEAARSEIQVLEH 67
Query: 153 LAGHE-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
L + V+ FE ++ I EL G D F+
Sbjct: 68 LNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYD---------------FIKENG 111
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK---------------- 251
+ + Q+ + H + L H D+KPEN LF +
Sbjct: 112 FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171
Query: 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLC 310
+ +K DFG + + + +V + +Y APEV L DVWSIG I
Sbjct: 172 INPDIKVVDFGSATYD--DEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 229
Query: 311 GRRPFWDKTED------------GIF-KEVLRNKP-----DFRRKPWPSISNSAK----- 347
G F T D G K +++ R W S++ +
Sbjct: 230 GFTVF--PTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRA 287
Query: 348 -------------------DFVKKLLVKDPRARLTAAQALSHPWVR 374
D ++K+L DP R+T +AL HP+
Sbjct: 288 CKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 74/345 (21%), Positives = 115/345 (33%), Gaps = 85/345 (24%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATD-KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
RY I LG G FG D +VA+K I +N E + E+ +L+
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKII-RNV---GKYREAARLEINVLKK 72
Query: 153 LAGHE-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
+ + V + F ++ IA EL G + FL
Sbjct: 73 IKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFE---------------FLKENN 116
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK---------------- 251
Y + Q+ H + L H D+KPEN LF +++
Sbjct: 117 FQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176
Query: 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLC 310
+++S++ DFG + F + IV + +Y PEV L+ DVWSIG I +
Sbjct: 177 KNTSIRVADFGSATFD--HEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234
Query: 311 GR---------------------------------------RPFWDKTEDGIFKEVLRNK 331
G WD+ K
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK 294
Query: 332 PDFRRKPWPSISNSA-KDFVKKLLVKDPRARLTAAQALSHPWVRE 375
P S+ + D ++++L DP R+T A+AL HP+
Sbjct: 295 PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAG 339
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 4e-25
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 19/151 (12%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
S + +L + F A+D D +G+IS+ E+ AL+ + ++L D N
Sbjct: 18 PSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSS-AGVPFSLATTEKLLHMYDKNH 76
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 526
G + F EF + + + F K D DG + E+R + +G
Sbjct: 77 SGEITFDEFKDLHHFILSM------------REGFRKRDSSGDGRLDSNEVRAALLSSGY 124
Query: 527 KGS---IDPLLEEADIDKDGRISLSEFRRLL 554
+ S L+ + D + G + ++ L
Sbjct: 125 QVSEQTFQALMRKFDRQRRGSLGFDDYVELS 155
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 6e-15
Identities = 19/99 (19%), Positives = 41/99 (41%), Gaps = 13/99 (13%)
Query: 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 477
+ +R+ F D +G + E+R AL +++ E +++ D G + F +
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAAL-LSSGYQVSEQTFQALMRKFDRQRRGSLGFDD 150
Query: 478 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+V ++ V ++ F +D +R G +T
Sbjct: 151 YVELSIFVCRVRN------------VFAFYDRERTGQVT 177
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 5e-25
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 29/193 (15%)
Query: 383 PIDISVLN--NMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAID--VDKNGSISL 438
+ SVL ++ + + L L A + E+ L + F I V +G I+
Sbjct: 10 HLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINK 69
Query: 439 EEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAA-TLHVHQLEEHDSEKW 496
EE + AL K KES + + D +G++ F EF A ++ D +
Sbjct: 70 EEFQLALFKT---NKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHF 126
Query: 497 HLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGS------------IDPLLEEADIDKD 542
+F+ +D+ + GFI +E++ + L S ID EEAD D
Sbjct: 127 ------SFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHD 180
Query: 543 GRISLSEFRRLLR 555
G+I E+R L+
Sbjct: 181 GKIDKEEWRSLVL 193
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 6e-25
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 403 QFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEIL 462
+ +A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++
Sbjct: 7 DDDDKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLM 65
Query: 463 QAIDCNTDGLVDFSEFVAATLH 484
A D + G +D+ EF+AAT+H
Sbjct: 66 DAADIDKSGTIDYGEFIAATVH 87
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 2e-12
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 18/91 (19%)
Query: 468 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 527
++ G +D + A +L E E L+ F+ D D G IT +EL+ GLK
Sbjct: 1 HSSGHIDDDDKHMA----ERLSE--EEIGGLK--ELFKMIDTDNSGTITFDELK--DGLK 50
Query: 528 --GS------IDPLLEEADIDKDGRISLSEF 550
GS I L++ ADIDK G I EF
Sbjct: 51 RVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 1e-24
Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 19/154 (12%)
Query: 421 LRDQFDAIDVDKNGSISLEE---MRQALAKDLPWKLKESRVLE-----------ILQAID 466
+ +F D D NG I + +A+ + + R + D
Sbjct: 6 IAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIAD 65
Query: 467 CNTDGLVDFSEFVAATLHVHQLEEHDSEKW-HLRSQAAFEKFDIDRDGFITPEELR---M 522
+ D + EFV + + + + AA D D DG +T +
Sbjct: 66 RDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALT 125
Query: 523 HTGLKGS-IDPLLEEADIDKDGRISLSEFRRLLR 555
G+ D D DG++ +E
Sbjct: 126 AFGVPEDLARQAAAALDTDGDGKVGETEIVPAFA 159
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 4e-10
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 470
+ L D D +G++++ + +AL + + E + A+D + D
Sbjct: 90 DRFAEMARPFLHAALGVADTDGDGAVTVADTARALTA---FGVPEDLARQAAAALDTDGD 146
Query: 471 GLVDFSEFVAA 481
G V +E V A
Sbjct: 147 GKVGETEIVPA 157
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156 | Back alignment and structure |
|---|
Score = 98.7 bits (247), Expect = 2e-24
Identities = 30/157 (19%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 405 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 464
A + + L +++ ++++ F IDVD++G +S E+++ + L + + +L+
Sbjct: 4 AASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQ-LGRAPDDKELTAMLKE 62
Query: 465 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 521
G ++F+ F+ ++ +L DSE+ +R AF FD + E ++
Sbjct: 63 A----PGPLNFTMFL--SIFSDKLSGTDSEE-TIR--NAFAMFDEQETKKLNIEYIKDLL 113
Query: 522 MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 555
+ G + + +EA ++ G+ +F +++
Sbjct: 114 ENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIK 149
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-24
Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 30/167 (17%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR------VLEILQAIDCNT 469
+ + + D D +G + +E++ + ++L K++ + +
Sbjct: 13 ITASQFFEIWLHFDADGSGYLEGKELQNLI-QELLQARKKAGLELSPEMKTFVDQYGQRD 71
Query: 470 DGLVDFSEFVA------ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 521
DG + E L + + ++ S + + K+D D GFI EEL+
Sbjct: 72 DGKIGIVELAHVLPTEENFLLLFRCQQLKSCE-EFM--KTWRKYDTDHSGFIETEELKNF 128
Query: 522 -MHTGLKGS-----------IDPLLEEADIDKDGRISLSEFRRLLRT 556
K + D +L+ D + DG++ L+E RLL
Sbjct: 129 LKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPV 175
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 99.2 bits (247), Expect = 2e-23
Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 23/186 (12%)
Query: 391 NMRQFVK-YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA--- 446
+ + + F L L E + + D D +G I EE++ L
Sbjct: 76 GIVELAHVLPTEENFLLLFRCQQLKSCE--EFMKTWRKYDTDHSGFIETEELKNFLKDLL 133
Query: 447 ----KDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA--ATLHVHQLEEHDSEKWHLRS 500
K + +L+ D N DG ++ +E L+ +
Sbjct: 134 EKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEF 193
Query: 501 QAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPLLEE--------ADIDKDGRISLSE 549
AFE +D D +G+I EL K + + + G++ ++
Sbjct: 194 NKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTD 253
Query: 550 FRRLLR 555
+L
Sbjct: 254 LALILS 259
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 99 bits (249), Expect = 2e-24
Identities = 27/168 (16%), Positives = 45/168 (26%), Gaps = 22/168 (13%)
Query: 410 ASTLDDEELADLRDQFDAI-DVDKNGSIS---LEEMRQALAKDLPWKLKESRVLE----- 460
A L D + + F+ D + +G I E + + W + E
Sbjct: 3 AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATL 62
Query: 461 ------ILQAIDCNTDGLVDFSEFVAA---TLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 511
+ + D N D V E++ + + E E F+ D
Sbjct: 63 KLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSG 122
Query: 512 DGFITPEELRMHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLR 555
D I E G D + ++ F RL
Sbjct: 123 DNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFARLWT 170
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 99.9 bits (249), Expect = 2e-24
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 21/156 (13%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L E +F +G ++L E +Q V ++ + D N DG
Sbjct: 11 LSATECHQWYKKFM--TECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGY 68
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---------- 522
+DF E+VAA V + + LR F+ +D+D +G I EL
Sbjct: 69 IDFMEYVAALSLVLKGKVDQ----KLRW--YFKLYDVDGNGCIDRGELLNIIKAIRAINR 122
Query: 523 ---HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
+ + + ++ DI+ DG +SL EF ++
Sbjct: 123 CNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ 158
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 9e-07
Identities = 26/122 (21%), Positives = 37/122 (30%), Gaps = 8/122 (6%)
Query: 406 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES------RVL 459
+ AL+ L + LR F DVD NG I E+ +
Sbjct: 75 VAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTN 134
Query: 460 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 519
+ ID N DG + EF+ L + + L + D PEE
Sbjct: 135 MVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRS--LDLTHIVKLIQNDGKNPHAPEE 192
Query: 520 LR 521
Sbjct: 193 AE 194
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 3e-24
Identities = 44/150 (29%), Positives = 88/150 (58%), Gaps = 12/150 (8%)
Query: 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 470
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGN 362
Query: 471 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 527
G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + G K
Sbjct: 363 GTIDFPEFL--TMMARKMKDTDSEEE-IR--EAFRVFDKDGNGYISAAELRHVMTNLGEK 417
Query: 528 GS---IDPLLEEADIDKDGRISLSEFRRLL 554
+ +D ++ EADID DG+++ EF +++
Sbjct: 418 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 447
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 4e-24
Identities = 66/315 (20%), Positives = 109/315 (34%), Gaps = 60/315 (19%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD-- 93
H+HH + T ++ + Q + K + S T P
Sbjct: 6 HHHHHDYDIPTTENLYFQGAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDL 65
Query: 94 --FDRRY-TIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKR 145
R+ T+ + LGHG FG Y + N +VAVK + + D
Sbjct: 66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS--EQDELDFLM 123
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
E I+ H+N+V+ +I +EL GG+L FL
Sbjct: 124 EALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKS---------------FL-- 165
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKA 258
R+ + +++ + +L VA + +L + +HRD+ N L K
Sbjct: 166 RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI 225
Query: 259 TDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVIT 305
DFG++ +DI + YY PE ++D WS GV+
Sbjct: 226 GDFGMA---------RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 276
Query: 306 Y-ILLCGRRPFWDKT 319
+ I G P+ K+
Sbjct: 277 WEIFSLGYMPYPSKS 291
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 5e-24
Identities = 38/232 (16%), Positives = 76/232 (32%), Gaps = 32/232 (13%)
Query: 345 SAKDFVKKLLVKDPRARLTAAQALS---HPWVREGGDASEIPIDISVLNNMRQFVKYSRL 401
K+ +K R R T + W+ S L + L
Sbjct: 20 GRIPLSKRESIKWQRPRFTRQALMRCCLIKWILSSAAPQGSDSSDSELELSTVRHQPEGL 79
Query: 402 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEI 461
Q + + +EL L F G + + + ++ P + +
Sbjct: 80 DQLQAQ---TKFTKKELQSLYRGFKNEC--PTGLVDEDTFKLIYSQFFPQGDATTYAHFL 134
Query: 462 LQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 521
A D + +G + F +FV + + H+ + + AF +DI++DG IT EE+
Sbjct: 135 FNAFDADGNGAIHFEDFVVGLSILLRGTVHE------KLKWAFNLYDINKDGCITKEEML 188
Query: 522 M------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
++ ++ D ++DG +++ EF +
Sbjct: 189 AIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ 240
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 7e-24
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 34/240 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G+ +G G FG Y+ TD A G+ VA+K +E K P + E KI + + G
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKHPQ----LHIESKIYKMMQGG 64
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +Y + MEL G L D L +++ K
Sbjct: 65 VGIPTIRWCGAEGDYNVMVMELL-GPSLED----------------LFNFCSRKFSLKTV 107
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------- 268
++ QM+ H +HRD+KP+NFL K+ + + DFGL+ +
Sbjct: 108 LLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI 167
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIG-VITYILLCGRRPFWDKTEDGIFKE 326
P ++ +++ G+A Y + D+ S+G V+ Y G P W + ++
Sbjct: 168 PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY-FNLGSLP-WQGLKAATKRQ 225
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 98.3 bits (245), Expect = 1e-23
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 27/184 (14%)
Query: 391 NMRQFVKYSRLKQFALRALAST--LDDEELADLRDQFDAIDVD--KNGSISLEEMRQALA 446
++ LAS EE+ L + F + +G I EE + AL
Sbjct: 7 KKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALF 66
Query: 447 KDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 505
++ + + + + I D +G+++F EFV + L V EK AF+
Sbjct: 67 RN---RNRRNLFADRIFDVFDVKRNGVIEFGEFVRS-LGVFHPSAPVHEKVKF----AFK 118
Query: 506 KFDIDRDGFITPEELR-------MHTGLKGS-------IDPLLEEADIDKDGRISLSEFR 551
+D+ + GFI EEL+ + L S +D +AD DG+I + E++
Sbjct: 119 LYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWK 178
Query: 552 RLLR 555
+
Sbjct: 179 DFVS 182
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 98.0 bits (244), Expect = 1e-23
Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 35/205 (17%)
Query: 397 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
++S + A+ D +L + +F ++ +G++ + E ++ K +
Sbjct: 4 QFSWEEAEENGAV-GAADAAQLQEWYKKF--LEECPSGTLFMHEFKRFF-KVPDNEEATQ 59
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
V + +A D N D +DF E+VAA V + KW F+ +D DR+G I
Sbjct: 60 YVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKW------TFKIYDKDRNGCID 113
Query: 517 PEELR-----------------------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRL 553
+EL + +D + D + DG++SL+EF
Sbjct: 114 RQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEG 173
Query: 554 LRT--ASISSRNVPPSPSGHRNPRK 576
R + + +PS + ++
Sbjct: 174 ARRDKWVMKMLQMDLNPSSWISQQR 198
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 56/242 (23%), Positives = 92/242 (38%), Gaps = 59/242 (24%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+G+ +G G FG + +A+ VAVK + P +E +IL+ H N
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP--PDLKAKFLQEARILKQY-SHPN 173
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ +YI MEL +GG+ L FL R + +
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLT---------------FL--RTEGA------RL 210
Query: 219 VVRQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
V+ +L++ + +HRD+ N L E + LK +DFG+S
Sbjct: 211 RVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMS------- 260
Query: 272 KFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWD 317
++ Y APE L + ESDVWS G++ + G P+ +
Sbjct: 261 --REEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPN 318
Query: 318 KT 319
+
Sbjct: 319 LS 320
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 3e-23
Identities = 63/316 (19%), Positives = 112/316 (35%), Gaps = 76/316 (24%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ-ALAGHE 157
T+ + +G G++G + + G+ VAVK + RE ++ + HE
Sbjct: 11 TLLECVGKGRYGEVWRGS--WQGENVAVKIF------SSRDEKSWFRETELYNTVMLRHE 62
Query: 158 NVVKFYNA----FEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
N++ F + +++ E G L D + + T L+I
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSI-------- 114
Query: 214 KDAAVVVRQMLRVAAECHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
+ HLH + HRD+K +N L K++ D GL
Sbjct: 115 ------ASGL------AHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADLGL 159
Query: 264 SDFIKPGKKFQDI-----VGSAYYVAPEVLKRKSGPE-------SDVWSIGVITYILLCG 311
+ D+ VG+ Y+APEVL + D+W+ G++ + +
Sbjct: 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
Query: 312 RRPFWDKTEDGI-FKEVLRNKPDF-----------RRKPWPS--ISNSAKDFVKKLLVK- 356
+ F +V+ N P F +R P+ S+ + KL+ +
Sbjct: 220 MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKEC 279
Query: 357 ---DPRARLTAAQALS 369
+P ARLTA +
Sbjct: 280 WYQNPSARLTALRIKK 295
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 3e-23
Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
+ + L + F +D D++G IS E++QAL+ V I+ D V
Sbjct: 2 ALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGV 61
Query: 474 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS- 529
+FSEF ++ W Q F +D D G I EL+ G + S
Sbjct: 62 NFSEFTGVWKYI--------TDW----QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD 109
Query: 530 --IDPLLEEADIDKDGRISLSEFRRLL 554
D L+ + D G+I+ +F +
Sbjct: 110 QFHDILIRKFDRQGRGQIAFDDFIQGC 136
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 4e-15
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 477
+ D ++ F D D +G I E++QAL ++L + +++ D G + F +
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQAL-SGFGYRLSDQFHDILIRKFDRQGRGQIAFDD 131
Query: 478 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
F+ + + +L + F ++D D+DG+I
Sbjct: 132 FIQGCIVLQRLTD------------IFRRYDTDQDGWIQ 158
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 4e-23
Identities = 69/321 (21%), Positives = 118/321 (36%), Gaps = 86/321 (26%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ-ALAGHE 157
+ K +G G++G ++ K G++VAVK RE +I Q L HE
Sbjct: 40 QMVKQIGKGRYGEVWMG--KWRGEKVAVKVF------FTTEEASWFRETEIYQTVLMRHE 91
Query: 158 NVVKFYNAFEDDNY----VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
N++ F A +Y+ + E G L D +L
Sbjct: 92 NILGFIAADIKGTGSWTQLYLITDYHENGSLYD---------------YL---------- 126
Query: 214 KDAAVVVRQMLRVAAE-----CHLH----------GLVHRDMKPENFLFKSAKEDSSLKA 258
K + + ML++A CHLH + HRD+K +N L K++ +
Sbjct: 127 KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV---KKNGTCCI 183
Query: 259 TDFGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRKSGPES-------DVWSIGVITY 306
D GL+ DI VG+ Y+ PEVL D++S G+I +
Sbjct: 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW 243
Query: 307 ILLCGRRPFWDKTEDGI-FKEVLRNKPDF-----------RRKPWPS--ISNSAKDFVKK 352
+ E + + +++ + P + R +P+ S+ + K
Sbjct: 244 EVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGK 303
Query: 353 LLVK----DPRARLTAAQALS 369
L+ + +P +RLTA +
Sbjct: 304 LMTECWAHNPASRLTALRVKK 324
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 95.3 bits (237), Expect = 7e-23
Identities = 36/177 (20%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Query: 399 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
S+L+ ++ L + + E+ + F + +G +S+EE ++ P+
Sbjct: 6 SKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASK 63
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+ + D N DG +DF EF+ A + + KW AF +D+D +G+I+
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKW------AFSMYDLDGNGYIS 117
Query: 517 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
E+ + + + + + D ++DG++SL EF R +
Sbjct: 118 KAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 174
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 99.1 bits (247), Expect = 8e-23
Identities = 66/318 (20%), Positives = 115/318 (36%), Gaps = 86/318 (27%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ-ALAGHE 157
+ + +G G+FG + K G+ VAVK RE +I Q + HE
Sbjct: 45 VLQESIGKGRFGEVWRG--KWRGEEVAVKIF------SSREERSWFREAEIYQTVMLRHE 96
Query: 158 NVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
N++ F A DN ++ + E G L D +L
Sbjct: 97 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD---------------YL---------- 131
Query: 214 KDAAVVVRQMLRVAAEC-----HLH----------GLVHRDMKPENFLFKSAKEDSSLKA 258
V V M+++A HLH + HRD+K +N L K++ +
Sbjct: 132 NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCI 188
Query: 259 TDFGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRKSGPE-------SDVWSIGVITY 306
D GL+ DI VG+ Y+APEVL + +D++++G++ +
Sbjct: 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 248
Query: 307 ILLCGRRPFWDKTEDGI-FKEVLRNKPDF-----------RRKPWPS--ISNSAKDFVKK 352
+ + + + +++ + P R P+ S A + K
Sbjct: 249 EIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAK 308
Query: 353 LLV----KDPRARLTAAQ 366
++ + ARLTA +
Sbjct: 309 IMRECWYANGAARLTALR 326
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 2e-22
Identities = 63/266 (23%), Positives = 102/266 (38%), Gaps = 68/266 (25%)
Query: 81 PCGKRTD-----FGYDK-DFDRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK 133
P G + GY + D + T K LG GQFG + D VA+K I++
Sbjct: 2 PLGSKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGS 60
Query: 134 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMI 193
M + ++ E K++ L+ HE +V+ Y ++I E G LL+
Sbjct: 61 M----SEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLN------- 108
Query: 194 STTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFL 246
+L R E +Q+L + + +L +HRD+ N L
Sbjct: 109 --------YL--R------EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 152
Query: 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGP 294
+ +K +DFGLS + ++ Y PEVL K
Sbjct: 153 ---VNDQGVVKVSDFGLS---------RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 295 ESDVWSIGVITY-ILLCGRRPFWDKT 319
+SD+W+ GV+ + I G+ P+ T
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYERFT 226
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 96.3 bits (239), Expect = 2e-22
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 36/180 (20%)
Query: 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL----------E 460
S + + A + D D NG I +E+ + + KL+ +
Sbjct: 3 SAFANLDAAGFLQIWQHFDADDNGYIEGKELDDFF-RHMLKKLQPKDKITDERVQQIKKS 61
Query: 461 ILQAIDCNTDGLVDFSEFVAATL--------HVHQLEEHDSEKWHLRSQAAFEKFDIDRD 512
+ A D DG + E L + D+ ++ + K+D D
Sbjct: 62 FMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMK---IWRKYDADSS 118
Query: 513 GFITPEELRM--------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 558
G+I+ EL+ L D +++ D +KDGR+ L++ R+L
Sbjct: 119 GYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQE 178
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 92.0 bits (228), Expect = 6e-21
Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 27/176 (15%)
Query: 406 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA-------KDLPWKLKESRV 458
L + + + D D +G IS E++ L K +P +
Sbjct: 91 LLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYT 150
Query: 459 LEILQAIDCNTDGLVDFSEFVA------ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 512
+++ D N DG +D ++ L +++ + + F +D+ R
Sbjct: 151 DAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRT 210
Query: 513 GFITPEELR-----MHTGLKGSIDP---------LLEEADIDKDGRISLSEFRRLL 554
G + E+ M ++ SI LL D++KDG+I SE L
Sbjct: 211 GALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCL 266
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 57.0 bits (137), Expect = 4e-09
Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 37/188 (19%)
Query: 405 ALRALASTLDDEELAD-------LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR 457
R + L ++ + A D +G + +EE+ + L R
Sbjct: 36 FFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLIFR 95
Query: 458 ----------VLEILQAIDCNTDGLVDFSEF--VAATLHVHQLEEHDSEKWHLRSQAAFE 505
++I + D ++ G + +E L + ++ K + A +
Sbjct: 96 REAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMK 155
Query: 506 KFDIDRDGFITPEELRMHTGLKGSIDPL--------------LEEA----DIDKDGRISL 547
FD ++DG + +L L+ + E+ D+ + G +
Sbjct: 156 IFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEG 215
Query: 548 SEFRRLLR 555
E ++
Sbjct: 216 PEVDGFVK 223
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 47.8 bits (113), Expect = 4e-06
Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 13/140 (9%)
Query: 401 LKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK------ 454
LK L+ ++ D +K+G + L ++ + LA + L+
Sbjct: 130 LKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDAS 189
Query: 455 -----ESRVLEILQAIDCNTDGLVDFSEF--VAATLHVHQLEEHDSEKWHLRSQAAFEKF 507
+ +I D + G ++ E + +
Sbjct: 190 SQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHC 249
Query: 508 DIDRDGFITPEELRMHTGLK 527
D+++DG I EL + GLK
Sbjct: 250 DMNKDGKIQKSELALCLGLK 269
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 4e-22
Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 36/242 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ +GK +G G FG + + + VA+K +E K P + E + + L
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMKSRAPQ----LHLEYRFYKQLGSG 64
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + + Y Y + +EL G S L D ++ K
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELL--GP---------------SLEDLFDLCDRTFSLKTV 107
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFI------ 267
++ Q++ H L++RD+KPENFL K + DF L+ ++I
Sbjct: 108 LMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKK 167
Query: 268 -KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIG-VITYILLCGRRPFWDKTEDGIF 324
P ++ + + G+A Y++ K D+ ++G + Y L G P W +
Sbjct: 168 HIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMY-FLRGSLP-WQGLKADTL 225
Query: 325 KE 326
KE
Sbjct: 226 KE 227
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 97.3 bits (242), Expect = 5e-22
Identities = 65/384 (16%), Positives = 118/384 (30%), Gaps = 125/384 (32%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F+ RY + + LG G F +++ D VA+ K+ K+ E E+++L+++
Sbjct: 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAM-KVVKS---AEHYTETALDEIRLLKSV 90
Query: 154 A-------GHENVVKFYNAFE----DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWF 202
E VV+ + F+ + ++ + E+ G LL +
Sbjct: 91 RNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLK---------------W 134
Query: 203 LAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFK------------- 248
+ +++Q+L+ H ++H D+KPEN L
Sbjct: 135 IIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA 194
Query: 249 ---------------------------------SAKEDSSLKATDFGLSDFIKPGKKFQD 275
E +K D G + + K F +
Sbjct: 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACW--VHKHFTE 252
Query: 276 IVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF------------------- 315
+ + Y + EV + +D+WS + + L G F
Sbjct: 253 DIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALII 312
Query: 316 ----------WDK--------TEDGIFKEVLRNKPDFRRKPWPSISN-------SAKDFV 350
T+ G K + + KP + DF+
Sbjct: 313 ELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFL 372
Query: 351 KKLLVKDPRARLTAAQALSHPWVR 374
+L P R TAA+ L HPW+
Sbjct: 373 LPMLELIPEKRATAAECLRHPWLN 396
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 7e-22
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 399 SRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 458
R Q + + + ++ + ++ F ID DK+G IS ++R L E +
Sbjct: 37 KRRAQRSGSNVFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDS-LGRLCTEQEL 95
Query: 459 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 518
++ G ++F+ F+ T+ ++ D E + AF FD + DG E
Sbjct: 96 DSMVA----EAPGPINFTMFL--TIFGDRIAGTDEEDV-IV--NAFNLFD-EGDGKCKEE 145
Query: 519 ELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 555
L+ G K S +D L EA ID +G I + +F ++L
Sbjct: 146 TLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILT 188
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 97.5 bits (243), Expect = 1e-21
Identities = 72/330 (21%), Positives = 119/330 (36%), Gaps = 73/330 (22%)
Query: 32 EAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSR--RQTGVIPCGKRT--- 86
E + H + + K + R +L H T + T P KR
Sbjct: 148 EGRVYH-YRINTASDGKLYVSSESRFNTLAELV--HHHSTVADGLITTLHYPAPKRNKPT 204
Query: 87 ----DFGYDK-DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
YDK + +R T+ LG GQ+G Y K VAVK ++++ M V
Sbjct: 205 IYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EV 260
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSA 200
E+ +E +++ + H N+V+ + YI E G LLD
Sbjct: 261 EEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLD-------------- 305
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKED 253
+L + +L +A + +L +HR++ N L E+
Sbjct: 306 -YLRECNRQEVS-------AVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GEN 354
Query: 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSI 301
+K DFGLS + + G Y APE L K +SDVW+
Sbjct: 355 HLVKVADFGLS---------RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 405
Query: 302 GVITY-ILLCGRRPFWDKTEDGIFKEVLRN 330
GV+ + I G P+ +++ + ++
Sbjct: 406 GVLLWEIATYGMSPYPGIDLSQVYELLEKD 435
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 1e-21
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 34/241 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y +G+ +G G FG + T+ N +VA+K E + P ++ E + + LAG
Sbjct: 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF-EPRRSDAPQ----LRDEYRTYKLLAGC 65
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ Y ++ + + ++L G S L +++ K
Sbjct: 66 TGIPNVYYFGQEGLHNVLVIDLL--GP---------------SLEDLLDLCGRKFSVKTV 108
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFI------ 267
A+ +QML H LV+RD+KP+NFL ++K + + DFG+ +
Sbjct: 109 AMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 168
Query: 268 -KPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325
P ++ +++ G+A Y++ L R+ D+ ++G + L G P W + K
Sbjct: 169 HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP-WQGLKAATNK 227
Query: 326 E 326
+
Sbjct: 228 Q 228
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 1e-21
Identities = 51/241 (21%), Positives = 96/241 (39%), Gaps = 61/241 (25%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T + +G GQFG ++ N D+VA+K I + M + ED E +++ L+ H
Sbjct: 11 TFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPK 64
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ Y + + + E E G L D +L +
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSD---------------YL--------RTQRGLF 101
Query: 219 VVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+L + + +L ++HRD+ N L E+ +K +DFG++
Sbjct: 102 AAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCL---VGENQVIKVSDFGMT------- 151
Query: 272 KFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 318
+ ++ Y +PEV + +SDVWS GV+ + + G+ P+ ++
Sbjct: 152 --RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 209
Query: 319 T 319
+
Sbjct: 210 S 210
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190 | Back alignment and structure |
|---|
Score = 91.4 bits (227), Expect = 2e-21
Identities = 36/177 (20%), Positives = 71/177 (40%), Gaps = 28/177 (15%)
Query: 399 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
S+L Q L+ L + D +EL F +G ++ E ++ + P+ +
Sbjct: 6 SKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDC--PSGHLNKSEFQKIYKQFFPFGDPSA 63
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+ D + +G +DF EF+ A + E +D W AF+ +D+D +G I+
Sbjct: 64 FAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIW------AFQLYDLDNNGLIS 117
Query: 517 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
+E+ + ++ + D +KDG+++L EF +
Sbjct: 118 YDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSK 174
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 2e-21
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 14/147 (9%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 475
+++ F D D +G +S+EE+ AL + L + + I ++ D
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSAL-RSLGKNPTNAELNTIKGQLNAKE---FDL 57
Query: 476 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS--- 529
+ F T++ ++ + + AF D + +G I ELR ++ G +
Sbjct: 58 ATFK--TVYRKPIKTPTEQSKEML--DAFRALDKEGNGTIQEAELRQLLLNLGDALTSSE 113
Query: 530 IDPLLEEADIDKDGRISLSEFRRLLRT 556
++ L++E + DG I+ F +L T
Sbjct: 114 VEELMKEVSVSGDGAINYESFVDMLVT 140
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 7e-10
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
+ + ++ D F A+D + NG+I E+RQ L L L S V E+++ + + DG +
Sbjct: 73 EQSK--EMLDAFRALDKEGNGTIQEAELRQLLLN-LGDALTSSEVEELMKEVSVSGDGAI 129
Query: 474 DFSEFV 479
++ FV
Sbjct: 130 NYESFV 135
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 2e-21
Identities = 59/255 (23%), Positives = 96/255 (37%), Gaps = 56/255 (21%)
Query: 92 KDFDRRY-TIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKR 145
K+ R+ T+ + LGHG FG Y + N +VAVK + + D
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS--EQDELDFLM 82
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
E I+ H+N+V+ +I MEL GG+L FL
Sbjct: 83 EALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKS---------------FL-- 124
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKA 258
R+ + +++ + +L VA + +L + +HRD+ N L K
Sbjct: 125 RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI 184
Query: 259 TDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVIT 305
DFG++ +DI ++YY PE ++D WS GV+
Sbjct: 185 GDFGMA---------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 235
Query: 306 Y-ILLCGRRPFWDKT 319
+ I G P+ K+
Sbjct: 236 WEIFSLGYMPYPSKS 250
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 2e-21
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 12/147 (8%)
Query: 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA-IDCNTDGLVDF 475
+D F D G+I+ + + L + + + V +I+ A +
Sbjct: 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYL-RAIGYNPTNQLVQDIINADSSLRDASSLTL 60
Query: 476 SEFVAATLHVHQLEEHDSEKWHLRSQ--AAFEKFDIDRDGFITPEELR---MHTGLKGS- 529
+ L +E D+ AF+ FD + G ++ +LR G K +
Sbjct: 61 DQIT--GLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTD 118
Query: 530 --IDPLLEEADIDKDGRISLSEFRRLL 554
+D LL+ ++D +G I +F +
Sbjct: 119 AEVDELLKGVEVDSNGEIDYKKFIEDV 145
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 2e-21
Identities = 65/314 (20%), Positives = 113/314 (35%), Gaps = 78/314 (24%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+ ++ G+FG + A + VAVK + EV L + HEN
Sbjct: 27 QLLEVKARGRFGCVWKAQ--LLNEYVAVKIFPIQDK----QSWQNEYEVYSLPGMK-HEN 79
Query: 159 VVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
+++F A + V ++ E G L D + A ++S W
Sbjct: 80 ILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVS------WNELCH-------- 125
Query: 215 DAAVVVRQMLRVAAE--CHLH------------GLVHRDMKPENFLFKSAKEDSSLKATD 260
+ A +LH + HRD+K +N L K + + D
Sbjct: 126 --------IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTACIAD 174
Query: 261 FGLSDFIKPGKKFQDI---VGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCG 311
FGL+ + GK D VG+ Y+APEVL +R + D++++G++ + L
Sbjct: 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR 234
Query: 312 RRPFWDKTEDGI--FKEVLRNKPDF--------RRKPWPSISNS-AKDFVKKLLVK---- 356
++ + F+E + P +K P + + K +L +
Sbjct: 235 CTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEE 294
Query: 357 ----DPRARLTAAQ 366
D ARL+A
Sbjct: 295 CWDHDAEARLSAGC 308
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 93.4 bits (233), Expect = 2e-21
Identities = 58/251 (23%), Positives = 99/251 (39%), Gaps = 59/251 (23%)
Query: 87 DFGYDK-DFDRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK 144
+F + + + + +G G+FG + G++VAVK I+ + +
Sbjct: 10 EFYRSGWALNMKELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDAT-----AQAFL 62
Query: 145 REVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL 203
E ++ L H N+V+ E+ +YI E G L+D +L
Sbjct: 63 AEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD---------------YL 106
Query: 204 AIRKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSL 256
R R + + +L+ + + +L + VHRD+ N L ED+
Sbjct: 107 --RSRGR-----SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVA 156
Query: 257 KATDFGLSDFI---KPGKKFQDIVGSAYYV---APEVLK-RKSGPESDVWSIGVITY-IL 308
K +DFGL+ + K V APE L+ +K +SDVWS G++ + I
Sbjct: 157 KVSDFGLTKEASSTQDTGKLP--------VKWTAPEALREKKFSTKSDVWSFGILLWEIY 208
Query: 309 LCGRRPFWDKT 319
GR P+
Sbjct: 209 SFGRVPYPRIP 219
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 96.6 bits (240), Expect = 2e-21
Identities = 51/229 (22%), Positives = 91/229 (39%), Gaps = 32/229 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
++ +G+ +G G FG Y+ T+ + VA+K +E K P + E KI + L G
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVKTKHPQ----LLYESKIYRILQGG 62
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +Y + M+L L S L + + K
Sbjct: 63 TGIPNVRWFGVEGDYNVLVMDL----------LGP-------SLEDLFNFCSRKLSLKTV 105
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------- 268
++ QM+ H +HRD+KP+NFL + + + DFGL+ +
Sbjct: 106 LMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHI 165
Query: 269 PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 316
P ++ +++ G+A Y + D+ S+G + L G P W
Sbjct: 166 PYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-W 213
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 90.7 bits (225), Expect = 2e-21
Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 22/165 (13%)
Query: 413 LDDEELADLRDQFDAI-DVDKNGSISLEE---MRQALAKDLPWKLKESRVLEILQAI--- 465
L+D + ++ FD D++ +GSI + M + L ++ + ++
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 466 --------DCNTDGLVDFSEFVAA---TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 514
D N D +V + E++A T+ + R F+ D+ DG
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 515 ITPEELRM---HTGLKGS-IDPLLEEADIDKDGRISLSEFRRLLR 555
+ EE + + L+ + + + L+ ++ L
Sbjct: 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYY 166
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 3e-21
Identities = 57/241 (23%), Positives = 94/241 (39%), Gaps = 61/241 (25%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ K LG GQFG + K VAVK I++ M + ++ +E + + L+ H
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQ-YDVAVKMIKEGSM----SEDEFFQEAQTMMKLS-HPK 64
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+VKFY + +YI E G LL+ +L +
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLN---------------YL--------RSHGKGL 101
Query: 219 VVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
Q+L + + L H +HRD+ N L D +K +DFG++
Sbjct: 102 EPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCL---VDRDLCVKVSDFGMT------- 151
Query: 272 KFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 318
+ ++ Y APEV K +SDVW+ G++ + + G+ P+
Sbjct: 152 --RYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY 209
Query: 319 T 319
T
Sbjct: 210 T 210
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 4e-21
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 11/149 (7%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI--DCNTD 470
+ ++L + ++ F+ D +G I + + + L + VL++L D
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVM-RALGQNPTNAEVLKVLGNPKSDELKS 62
Query: 471 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 527
VDF F+ V + + + F FD + +G + ELR G K
Sbjct: 63 RRVDFETFLPMLQAVAKNRGQGTYED-YL--EGFRVFDKEGNGKVMGAELRHVLTTLGEK 119
Query: 528 GSIDPLLE--EADIDKDGRISLSEFRRLL 554
+ + + D +G I+ F + +
Sbjct: 120 MTEEEVETVLAGHEDSNGCINYEAFLKHI 148
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 4e-21
Identities = 61/305 (20%), Positives = 101/305 (33%), Gaps = 71/305 (23%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRY-TIGKLLGHG 107
+ H H S V+ + + T K++G G
Sbjct: 4 YHHHHHHDYDIPTTENLYFQGAMGSDPNQAVLK--------FTTEIHPSCVTRQKVIGAG 55
Query: 108 QFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+FG Y K + + VA+K ++ D E I+ + H N+++
Sbjct: 56 EFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT--EKQRVDFLGEAGIMGQFS-HHNIIRLE 112
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQM 223
+ I E E G L FL + V Q+
Sbjct: 113 GVISKYKPMMIITEYMENGALDK---------------FLREKDGE--------FSVLQL 149
Query: 224 LRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+ + +L VHRD+ N L + K +DFGLS + +D
Sbjct: 150 VGMLRGIAAGMKYLANMNYVHRDLAARNIL---VNSNLVCKVSDFGLSRVL------EDD 200
Query: 277 VGSAYYV----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 324
+ Y APE + RK SDVWS G++ + ++ G RP+W+ +
Sbjct: 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN---- 256
Query: 325 KEVLR 329
EV++
Sbjct: 257 HEVMK 261
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 4e-21
Identities = 67/311 (21%), Positives = 100/311 (32%), Gaps = 75/311 (24%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGK----RTDFGYDKDFDRRY-TIG 101
H H H R Y Q K Q P R + ++ + I
Sbjct: 2 HHHHHHSSGRENLYFQGKL-------PEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIE 54
Query: 102 KLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
K++G G G + G R VA+K ++ D E I+ H N
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT--ERQRRDFLSEASIMGQFD-HPN 111
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+++ I E E G L FL
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDT---------------FLRTHDGQ--------F 148
Query: 219 VVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+ Q++ + +L G VHRD+ N L + K +DFGLS ++
Sbjct: 149 TIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVL---VDSNLVCKVSDFGLSRVLEDDP 205
Query: 272 KFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 318
A Y APE + R SDVWS GV+ + +L G RP+W+
Sbjct: 206 -------DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
Query: 319 TEDGIFKEVLR 329
T ++V+
Sbjct: 259 TN----RDVIS 265
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 6e-21
Identities = 67/279 (24%), Positives = 102/279 (36%), Gaps = 66/279 (23%)
Query: 58 KNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD--FDR-RYTIGKLLGHGQFGYTYV 114
K Q++ K + T + P T Y++ F R GK LG G FG
Sbjct: 9 KPKYQVRWKIIESYEGNSYTFIDP----TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 115 AT----DKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169
AT K + +VAVK ++ E + E+KI+ L HEN+V A
Sbjct: 65 ATAFGLGKEDAVLKVAVKMLKSTAH--ADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFL-----AIRKDSRYTEKDAAVVVRQML 224
V + E C G+LL+ FL + D + ++ R +L
Sbjct: 123 GPVLVITEYCCYGDLLN---------------FLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 225 RVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
+++ L +HRD+ N L K DFGL+ +DI+
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVL---LTNGHVAKIGDFGLA---------RDIM 215
Query: 278 GSAYYV------------APEVLK-RKSGPESDVWSIGV 303
+ Y+ APE + +SDVWS G+
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 7e-21
Identities = 63/258 (24%), Positives = 105/258 (40%), Gaps = 53/258 (20%)
Query: 90 YDK-DFDRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
YDK + +R T+ LG GQ+G Y K VAVK ++++ M VE+ +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEA 60
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
+++ + H N+V+ + YI E G LLD +L +
Sbjct: 61 AVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLD---------------YL---R 101
Query: 208 DSRYTEKDAAVVVRQMLRVAAEC-HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ E A V++ ++++ +L +HRD+ N L E+ +K DFGLS
Sbjct: 102 ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLS 158
Query: 265 DFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCG 311
+ G Y APE L K +SDVW+ GV+ + I G
Sbjct: 159 RLMT---------GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 312 RRPFWDKTEDGIFKEVLR 329
P+ +++ + +
Sbjct: 210 MSPYPGIDLSQVYELLEK 227
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 8e-21
Identities = 63/277 (22%), Positives = 98/277 (35%), Gaps = 62/277 (22%)
Query: 67 QHQKTNSRR--QTGVIPCGKRTDFGYDKDFDR-----RYTIGKLLGHGQFGYTYVATDKA 119
H K + Q +PC + + K LG GQFG ++AT
Sbjct: 152 DHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNK 211
Query: 120 NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179
+ VAVK ++ M +VE E +++ L H+ +VK + + +YI E
Sbjct: 212 HTK-VAVKTMKPGSM----SVEAFLAEANVMKTLQ-HDKLVKLHAVVTKEP-IYIITEFM 264
Query: 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAE--CHL--HGL 235
G LLD FL + S+ + AE +
Sbjct: 265 AKGSLLD---------------FLKSDEGSKQPLPK----LIDFSAQIAEGMAFIEQRNY 305
Query: 236 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------A 284
+HRD++ N L K DFGL+ + I + Y A
Sbjct: 306 IHRDLRAANILV---SASLVCKIADFGLA---------RVIEDNEYTAREGAKFPIKWTA 353
Query: 285 PEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 319
PE + +SDVWS G++ I+ GR P+ +
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 390
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 1e-20
Identities = 72/293 (24%), Positives = 111/293 (37%), Gaps = 48/293 (16%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD--FDR-RYTIGKLLGHG 107
H+++++ + QL+ Q ++ V ++ YD F R GK+LG G
Sbjct: 1 HKYKKQFRYESQLQMVQVTGSSDNEYFYVDF----REYEYDLKWEFPRENLEFGKVLGSG 56
Query: 108 QFGYTYVAT----DKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
FG AT K +VAVK +++ E + E+K++ L HEN+V
Sbjct: 57 AFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNL 114
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ 222
A +Y+ E C G+LL+ L +K E +
Sbjct: 115 LGACTLSGPIYLIFEYCCYGDLLN-YLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFED 173
Query: 223 MLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
+L A + L VHRD+ N L +K DFGL+ +D
Sbjct: 174 LLCFAYQVAKGMEFLEFKSCVHRDLAARNVL---VTHGKVVKICDFGLA---------RD 221
Query: 276 IVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 314
I+ + YV APE L +SDVWS G++ + I G P
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-20
Identities = 55/245 (22%), Positives = 87/245 (35%), Gaps = 60/245 (24%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ + LG G FG A + VAVK ++ + + P A++D REV + +L
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD- 79
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H N+++ Y + + EL G LLD L +
Sbjct: 80 HRNLIRLYGVVLTPP-MKMVTELAPLGSLLD---------------RLRKHQGH------ 117
Query: 216 AAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
++ + R A + +L +HRD+ N L + +K DFGL +
Sbjct: 118 --FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT---RDLVKIGDFGLMRALP 172
Query: 269 PGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 314
+YV APE LK R SD W GV + + G+ P
Sbjct: 173 QNDD--------HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
Query: 315 FWDKT 319
+
Sbjct: 225 WIGLN 229
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-20
Identities = 64/246 (26%), Positives = 94/246 (38%), Gaps = 41/246 (16%)
Query: 94 FDRRY-TIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKIL 150
D ++G G FG A K +G R A+K++++ D E+++L
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVL 79
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
L H N++ A E Y+Y+A+E G LLD L K A+ +A S
Sbjct: 80 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTAST 138
Query: 211 YTEKDAAVVVRQMLRVAAEC-HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + VA +L +HRD+ N L E+ K DFGLS
Sbjct: 139 LSSQQLLHFAAD---VARGMDYLSQKQFIHRDLAARNIL---VGENYVAKIADFGLS--- 189
Query: 268 KPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRR 313
+ Q+ YV A E L SDVWS GV+ + I+ G
Sbjct: 190 ----RGQE-----VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 240
Query: 314 PFWDKT 319
P+ T
Sbjct: 241 PYCGMT 246
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 2e-20
Identities = 59/265 (22%), Positives = 104/265 (39%), Gaps = 65/265 (24%)
Query: 90 YDKD---FDRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR 145
+ +D R + + LG GQFG ++ + +VAVK +++ M + +
Sbjct: 3 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHT-KVAVKSLKQGSM----SPDAFLA 57
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
E +++ L H+ +V+ Y + +YI E E G L+D FL
Sbjct: 58 EANLMKQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVD---------------FLKT 100
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKA 258
+ T + ++L +AA+ + +HRD++ N L + S K
Sbjct: 101 PSGIKLT-------INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKI 150
Query: 259 TDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY 306
DFGL+ + I + Y APE + +SDVWS G++
Sbjct: 151 ADFGLA---------RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 307 -ILLCGRRPFWDKTEDGIFKEVLRN 330
I+ GR P+ T + + + R
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERG 226
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 2e-20
Identities = 50/241 (20%), Positives = 85/241 (35%), Gaps = 54/241 (22%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALA 154
K+LG G FG Y G++ VA+K++ + P A +++ E ++ ++
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVD 75
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
+ +V + V + +L G LLD ++ +
Sbjct: 76 -NPHVCRLLGICLTST-VQLITQLMPFGCLLD---------------YV-REHKDNIGSQ 117
Query: 215 DAAVVVRQMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
Q +A + LVHRD+ N L K +K TDFGL+ +
Sbjct: 118 YLLNWCVQ---IAKGMNYLEDRRLVHRDLAARNVL---VKTPQHVKITDFGLAKLLGA-- 169
Query: 272 KFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 318
Y A E + R +SDVWS GV + ++ G +P+
Sbjct: 170 ------EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 319 T 319
Sbjct: 224 P 224
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 2e-20
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 59/238 (24%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+ + +G G+FG + G++VAVK I+ + + E ++ L H N
Sbjct: 196 KLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDAT-----AQAFLAEASVMTQLR-HSN 247
Query: 159 VVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V+ E+ +YI E G L+D +L R R +
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVD---------------YL--RSRGR-----SV 285
Query: 218 VVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
+ +L+ + + +L + VHRD+ N L ED+ K +DFGL+
Sbjct: 286 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT------ 336
Query: 271 KKFQDIVGSAYYV-------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 319
++ + APE L+ +K +SDVWS G++ + I GR P+
Sbjct: 337 ---KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 88.0 bits (218), Expect = 2e-20
Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 28/177 (15%)
Query: 399 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
S+LK + L ++E+ F I +G + ++ + P+
Sbjct: 6 SKLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFFPFGDPTK 63
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+ D N DG ++FSEF+ A + + +W AF+ +D+D DG+IT
Sbjct: 64 FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRW------AFKLYDLDNDGYIT 117
Query: 517 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
E+ + +D + D + DG+++L EF+ +
Sbjct: 118 RNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 174
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 4e-20
Identities = 69/330 (20%), Positives = 118/330 (35%), Gaps = 77/330 (23%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLKTK--------QHQKTNS----RRQTGVIPCG 83
+A+ ++ + + Y +T+ + ++ R T V P
Sbjct: 191 SDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTS 250
Query: 84 KRTDFGYDKD---FDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA 139
K G KD R + LG G FG ++ T VA+K ++ M +
Sbjct: 251 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----S 305
Query: 140 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
E +E ++++ L HE +V+ Y ++ +YI E G LLD
Sbjct: 306 PEAFLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD------------- 350
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKE 252
FL + Q++ +AA+ ++ VHRD++ N L E
Sbjct: 351 --FLKGETGKYLR-------LPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL---VGE 398
Query: 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWS 300
+ K DFGL+ + I + Y APE + +SDVWS
Sbjct: 399 NLVCKVADFGLA---------RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 301 IGVITY-ILLCGRRPFWDKTEDGIFKEVLR 329
G++ + GR P+ + +V R
Sbjct: 450 FGILLTELTTKGRVPYPGMVNREVLDQVER 479
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 5e-20
Identities = 61/251 (24%), Positives = 89/251 (35%), Gaps = 58/251 (23%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
F+ R+ LG G FG Y G VAVK++ + P D +RE++
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL---QHSGPDQQRDFQREIQ 76
Query: 149 ILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
IL+AL + +VK+ + + ME G L D FL R
Sbjct: 77 ILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD---------------FL-QR 119
Query: 207 KDSRYTEKDAAVVVRQMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
+R + Q + VHRD+ N L + ++ +K DFGL
Sbjct: 120 HRARLDASRLLLYSSQ---ICKGMEYLGSRRCVHRDLAARNIL---VESEAHVKIADFGL 173
Query: 264 SDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILL 309
+ + K YYV APE L +SDVWS GV+ Y +
Sbjct: 174 AKLLPLDKD--------YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
Query: 310 CGRRPFWDKTE 320
+ E
Sbjct: 226 YCDKSCSPSAE 236
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 6e-20
Identities = 31/161 (19%), Positives = 63/161 (39%), Gaps = 18/161 (11%)
Query: 413 LDDEELADLRDQFDAIDVDKN--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 470
L +E+ DL+D F+ D G++ ++ + L + V + +
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVC-RCLGINPRNEDVFAVGG-THKMGE 60
Query: 471 GLVDFSEFVAATLHVHQL-EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 526
+ F EF+ + + E + AF+ FD + GFI+ ELR G
Sbjct: 61 KSLPFEEFL--PAYEGLMDCEQGTFA-DYM--EAFKTFDREGQGFISGAELRHVLTALGE 115
Query: 527 KGS---IDPLLEEADI--DKDGRISLSEFRRLLRTASISSR 562
+ S +D +++ D+ D +G + +F + + +
Sbjct: 116 RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPDK 156
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 6e-20
Identities = 66/288 (22%), Positives = 103/288 (35%), Gaps = 63/288 (21%)
Query: 67 QHQKTNS----RRQTGVIPCGKRTDFGYDKD---FDR-RYTIGKLLGHGQFGYTYVATDK 118
+ ++ R T V P K G KD R + LG G FG ++ T
Sbjct: 147 AYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN 206
Query: 119 ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 178
RVA+K ++ M + E +E ++++ L HE +V+ Y ++ +YI E
Sbjct: 207 GTT-RVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSEE-PIYIVTEY 259
Query: 179 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAE--CHL--HG 234
G LLD FL + M A ++
Sbjct: 260 MSKGSLLD---------------FLKGETGKYLRLPQ----LVDMAAQIASGMAYVERMN 300
Query: 235 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV----------- 283
VHRD++ N L E+ K DFGL+ + I + Y
Sbjct: 301 YVHRDLRAANIL---VGENLVCKVADFGLA---------RLIEDNEYTARQGAKFPIKWT 348
Query: 284 APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 329
APE + +SDVWS G++ + GR P+ + +V R
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 9e-20
Identities = 66/258 (25%), Positives = 96/258 (37%), Gaps = 49/258 (18%)
Query: 86 TDFGYDKD--FDR-RYTIGKLLGHGQFGYTYVAT----DKANGD-RVAVKKIEKNKMILP 137
T YD F R R + GK LG G FG AT K++ VAVK ++ +
Sbjct: 10 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--L 67
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
E + E+K+L L H N+V A + E C G+LL+ + K S
Sbjct: 68 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 127
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSA 250
+ + D A+ + +L + + L +HRD+ N L
Sbjct: 128 SKTSPAIMEDDEL------ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL---L 178
Query: 251 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESD 297
K DFGL+ +DI + YV APE + ESD
Sbjct: 179 THGRITKICDFGLA---------RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 229
Query: 298 VWSIGVITY-ILLCGRRP 314
VWS G+ + + G P
Sbjct: 230 VWSYGIFLWELFSLGSSP 247
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 1e-19
Identities = 41/249 (16%), Positives = 78/249 (31%), Gaps = 64/249 (25%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGD-------RVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+ LG G F + + GD V +K ++K E ++
Sbjct: 11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS---ESFFEAASMMS 67
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
L+ H+++V Y + + E + G L +L +K
Sbjct: 68 KLS-HKHLVLNYGVCVCGDENILVQEFVKFGSLDT---------------YL--KK---- 105
Query: 212 TEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFL-----FKSAKEDSSLKAT 259
+ + L VA + L + L+H ++ +N L + +K +
Sbjct: 106 --NKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163
Query: 260 DFGLSDFIKPGKKFQDIVGSAYY------VAPEVLK--RKSGPESDVWSIGVITY-ILLC 310
D G+S ++ V PE ++ + +D WS G + I
Sbjct: 164 DPGIS---------ITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
Query: 311 GRRPFWDKT 319
G +P
Sbjct: 215 GDKPLSALD 223
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 84.5 bits (210), Expect = 1e-19
Identities = 23/150 (15%), Positives = 53/150 (35%), Gaps = 13/150 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT--D 470
D ++ F D + I+ ++ + L + + +IL
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIA-RALGQNPTNAEINKILGNPSKEEMNA 60
Query: 471 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 527
+ F EF+ ++ + + + FD + +G + ELR G K
Sbjct: 61 AAITFEEFLPMLQAAANNKDQGTFEDFVE---GLRVFDKEGNGTVMGAELRHVLATLGEK 117
Query: 528 GS---IDPLLEEADIDKDGRISLSEFRRLL 554
+ ++ L++ + D +G I+ F + +
Sbjct: 118 MTEEEVEELMKGQE-DSNGCINYEAFVKHI 146
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 2e-19
Identities = 56/267 (20%), Positives = 96/267 (35%), Gaps = 63/267 (23%)
Query: 94 FDR-RYTIGKLLGHGQFGYTY--VATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKI 149
++T+G++LG G+FG + +VAVK + K +I +E+ RE
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAAC 78
Query: 150 LQALAGHENVVKFY------NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL 203
++ H +V K A + + + G+L FL
Sbjct: 79 MKEF-DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHA---------------FL 122
Query: 204 AIRKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSL 256
SR E + ++ ++R + +L +HRD+ N + ED ++
Sbjct: 123 ---LASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCM---LAEDMTV 176
Query: 257 KATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGV 303
DFGLS + I YY A E L SDVW+ GV
Sbjct: 177 CVADFGLS---------RKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGV 227
Query: 304 ITY-ILLCGRRPFWDKTEDGIFKEVLR 329
+ I+ G+ P+ I+ ++
Sbjct: 228 TMWEIMTRGQTPYAGIENAEIYNYLIG 254
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 2e-19
Identities = 60/244 (24%), Positives = 93/244 (38%), Gaps = 62/244 (25%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+G+ +G GQFG + + + VA+K + E +E ++
Sbjct: 18 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS--DSVREKFLQEALTMRQFD- 74
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H ++VK ++ V+I MELC GEL FL +RK S
Sbjct: 75 HPHIVKLIGVITENP-VWIIMELCTLGELRS---------------FLQVRKYS------ 112
Query: 216 AAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ + ++ A + +L VHRD+ N L + +K DFGLS
Sbjct: 113 --LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVL---VSSNDCVKLGDFGLS---- 163
Query: 269 PGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
+ + S YY APE + R+ SDVW GV + IL+ G +PF
Sbjct: 164 -----RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218
Query: 316 WDKT 319
Sbjct: 219 QGVK 222
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 2e-19
Identities = 59/299 (19%), Positives = 107/299 (35%), Gaps = 67/299 (22%)
Query: 63 LKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD--FDR-RYTIGKLLGHGQFGYTY--VATD 117
+ + H +S +G++P G +D DR +GK+LG G+FG
Sbjct: 1 MGSSHHHHHHS---SGLVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQ 57
Query: 118 KANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY-----NAFEDDNY 171
+ +VAVK + K +E+ E ++ H NV++ + +
Sbjct: 58 EDGTSLKVAVKTM-KLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQGIPK 115
Query: 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAE-- 229
+ + + G+L +L SR + ++ +L+ +
Sbjct: 116 PMVILPFMKYGDLHT---------------YL---LYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 230 ---CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV- 283
+L +HRD+ N + ++D ++ DFGLS + I YY
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCM---LRDDMTVCVADFGLS---------KKIYSGDYYRQ 205
Query: 284 -----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 329
A E L R +SDVW+ GV + I G P+ ++ +L
Sbjct: 206 GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH 264
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 2e-19
Identities = 70/269 (26%), Positives = 97/269 (36%), Gaps = 52/269 (19%)
Query: 90 YDKD---FDR-RYTIGKLLGHGQFGYTYVATDKANGD-------RVAVKKIEKNKMILPI 138
YD F R R +GK LG G FG A A G VAVK +++
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEAD--AFGIDKTATCRTVAVKMLKEGAT--HS 72
Query: 139 AVEDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
+ E+KIL + H NVV A + + + +E C+ G L L + +
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST-YLRSKRNEFV 131
Query: 198 TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC-HL--HGLVHRDMKPENFLFKSAKEDS 254
T + Q VA L +HRD+ N L E +
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQ---VAKGMEFLASRKCIHRDLAARNIL---LSEKN 185
Query: 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSI 301
+K DFGL+ +DI YV APE + R +SDVWS
Sbjct: 186 VVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 302 GVITY-ILLCGRRPFWDKTEDGIFKEVLR 329
GV+ + I G P+ D +E R
Sbjct: 237 GVLLWEIFSLGASPYPGVKID---EEFCR 262
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224 | Back alignment and structure |
|---|
Score = 85.8 bits (212), Expect = 3e-19
Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 26/191 (13%)
Query: 383 PIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMR 442
P + + + + R + + EL L F +G ++ E +
Sbjct: 18 PSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNEC--PSGVVNEETFK 75
Query: 443 QALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA 502
Q A+ P + + A D G V F +FV A + + H+ +W
Sbjct: 76 QIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRW------ 129
Query: 503 AFEKFDIDRDGFITPEELRM------------------HTGLKGSIDPLLEEADIDKDGR 544
F +DI++DG+I EE+ + +D ++ D +KDG
Sbjct: 130 TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 189
Query: 545 ISLSEFRRLLR 555
++L EF +
Sbjct: 190 VTLDEFLESCQ 200
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 3e-19
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 18/108 (16%)
Query: 460 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 518
+I +AI G D+ F + + ++ FE D D+ GFI E
Sbjct: 10 DINKAISAFKDPGTFDYKRFFHLVGLKGKTDAQ------VK--EVFEILDKDQSGFIEEE 61
Query: 519 ELR------MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 557
EL+ G + LL D D DG+I EF +++ A
Sbjct: 62 ELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 3e-11
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 406 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQ 463
+ + +++ F+ +D D++G I EE++ L L ++ +L
Sbjct: 30 FHLVGLKGKTDA--QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLA 87
Query: 464 AIDCNTDGLVDFSEFVA 480
A D + DG + EF
Sbjct: 88 AGDSDHDGKIGADEFAK 104
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 3e-19
Identities = 69/332 (20%), Positives = 110/332 (33%), Gaps = 100/332 (30%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD---FDRRY-TIGKLL 104
+ H H +Y T+ + G D+D F+ R+ + L
Sbjct: 4 YHHHHHH---DYDIPTTE-----------NLYFQGAMGSAFEDRDPTQFEERHLKFLQQL 49
Query: 105 GHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
G G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+V
Sbjct: 50 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEILKSLQ-HDNIV 105
Query: 161 KFYNAFEDDNY--VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
K+ + + ME G L D +L K+ +
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRD---------------YLQKHKER--------I 142
Query: 219 VVRQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
++L+ ++ +HRD+ N L + ++ +K DFGL+ + K
Sbjct: 143 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDK 199
Query: 272 KFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGV-----ITYILLCGRR 313
+ YY APE L K SDVWS GV TYI
Sbjct: 200 E--------YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251
Query: 314 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 345
P G +
Sbjct: 252 PAEFMRMIG-------------NDKQGQMIVF 270
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 4e-19
Identities = 61/236 (25%), Positives = 92/236 (38%), Gaps = 41/236 (17%)
Query: 94 FDR-RYTIGKLLGHGQFGYTYVAT----DKANGD-RVAVKKIEKNKMILPIAVEDVKREV 147
F R +GK LG G+FG AT G VAVK +++N P + D+ E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS--PSELRDLLSEF 77
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
+L+ + H +V+K Y A D + + +E + G L + +
Sbjct: 78 NVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 208 DSRYTEKDAAVVVRQMLRVAAEC-----HL--HGLVHRDMKPENFLFKSAKEDSSLKATD 260
S + A+ + ++ A + +L LVHRD+ N L E +K +D
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL---VAEGRKMKISD 193
Query: 261 FGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGV 303
FGLS +D+ YV A E L +SDVWS GV
Sbjct: 194 FGLS---------RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 4e-19
Identities = 57/254 (22%), Positives = 96/254 (37%), Gaps = 58/254 (22%)
Query: 94 FDR-RYTIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKREV 147
R + T+ + LG G FG Y VA + RVA+K + + + E
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS--MRERIEFLNEA 79
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL-AIR 206
+++ +VV+ + MEL G+L +L ++R
Sbjct: 80 SVMKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS---------------YLRSLR 123
Query: 207 KDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKAT 259
A + +M+++A E +L + VHRD+ N + ED ++K
Sbjct: 124 PAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIG 180
Query: 260 DFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY 306
DFG++ +DI + YY +PE LK SDVWS GV+ +
Sbjct: 181 DFGMT---------RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 231
Query: 307 -ILLCGRRPFWDKT 319
I +P+ +
Sbjct: 232 EIATLAEQPYQGLS 245
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 5e-19
Identities = 62/261 (23%), Positives = 99/261 (37%), Gaps = 62/261 (23%)
Query: 92 KDFDRRY-TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREV 147
K+ D +I K++G G+FG K + VA+K ++ D E
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEA 97
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
I+ H N+++ V I E E G L FL RK
Sbjct: 98 SIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDS---------------FL--RK 139
Query: 208 DSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATD 260
DA V Q++ + +L G VHRD+ N L + K +D
Sbjct: 140 H------DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSD 190
Query: 261 FGLSDFIKPGKKFQDIVGSAYYV----------APEVLK-RKSGPESDVWSIGVITY-IL 308
FGL + +D +AY +PE + RK SDVWS G++ + ++
Sbjct: 191 FGLGRVL------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 309 LCGRRPFWDKTEDGIFKEVLR 329
G RP+W+ + ++V++
Sbjct: 245 SYGERPYWEMSN----QDVIK 261
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 89.9 bits (223), Expect = 5e-19
Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 62/252 (24%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+G+ +G GQFG + + + VA+K + E +E ++
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS--DSVREKFLQEALTMRQF-D 449
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H ++VK ++ V+I MELC GEL FL +RK S
Sbjct: 450 HPHIVKLIGVITENP-VWIIMELCTLGELRS---------------FLQVRKFS------ 487
Query: 216 AAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ + ++ A + +L VHRD+ N L + +K DFGLS +++
Sbjct: 488 --LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVL---VSSNDCVKLGDFGLSRYME 542
Query: 269 PGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
S YY APE + R+ SDVW GV + IL+ G +PF
Sbjct: 543 ---------DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
Query: 316 WDKTEDGIFKEV 327
+ + +
Sbjct: 594 QGVKNNDVIGRI 605
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 5e-19
Identities = 60/284 (21%), Positives = 98/284 (34%), Gaps = 83/284 (29%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
F+ R+ + LG G FG Y G+ VAVKK++ + + D +RE++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIE 63
Query: 149 ILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
IL++L H+N+VK+ + + ME G L D +L
Sbjct: 64 ILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD---------------YLQKH 107
Query: 207 KDSRYTEKDAAVVVRQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
K+ + ++L+ ++ +HRD+ N L + ++ +K
Sbjct: 108 KER--------IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIG 156
Query: 260 DFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGV--- 303
DFGL+ + K+ ++ APE L K SDVWS GV
Sbjct: 157 DFGLTKVLPQDKE--------FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 304 --ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 345
TYI P G +
Sbjct: 209 ELFTYIEKSKSPPAEFMRMIG-------------NDKQGQMIVF 239
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 6e-19
Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 453 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 512
LK++ V L A EF A + + ++ AF D D+
Sbjct: 6 LKDADVAAALAACS--AADSFKHKEFFAKVGLASKSLDD------VK--KAFYVIDQDKS 55
Query: 513 GFITPEELRM------HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 555
GFI +EL++ + + L + D D DG I + EF +++
Sbjct: 56 GFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 5e-11
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDC 467
L + L D++ F ID DK+G I +E++ L P L ++ L D
Sbjct: 32 KVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDK 91
Query: 468 NTDGLVDFSEFVA 480
+ DG++ EF A
Sbjct: 92 DGDGMIGVDEFAA 104
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 8e-19
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 43/261 (16%)
Query: 94 FDR-RYTIGKLLGHGQFGYTYVAT----DKANGD---RVAVKKIEKNKMILPIAVEDVKR 145
R R +GK LG G FG +A DK + +VAVK ++ + + D+
Sbjct: 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--EKDLSDLIS 123
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
E+++++ + H+N++ A D +Y+ +E G L + L L ++ +
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE-YLQARRPPGLEYSYNPSH 182
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAEC-HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFG 262
+ + + KD Q VA +L +HRD+ N L ED+ +K DFG
Sbjct: 183 NPEEQLSSKDLVSCAYQ---VARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFG 236
Query: 263 LSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-IL 308
L+ +DI YY APE L R +SDVWS GV+ + I
Sbjct: 237 LA---------RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287
Query: 309 LCGRRPFWDKTEDGIFKEVLR 329
G P+ + +FK +
Sbjct: 288 TLGGSPYPGVPVEELFKLLKE 308
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 1e-18
Identities = 57/244 (23%), Positives = 90/244 (36%), Gaps = 62/244 (25%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ ++LG G FG Y + VAVK +K+ E E I++ L
Sbjct: 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT--LDNKEKFMSEAVIMKNLD- 71
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
H ++VK E++ +I MEL GEL +L ++
Sbjct: 72 HPHIVKLIGIIEEEP-TWIIMELYPYGELGH---------------YL--ERN------K 107
Query: 216 AAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
++ V ++ + + +L VHRD+ N L +K DFGLS
Sbjct: 108 NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNIL---VASPECVKLGDFGLS---- 160
Query: 269 PGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 315
+ I YY +PE + R+ SDVW V + IL G++PF
Sbjct: 161 -----RYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215
Query: 316 WDKT 319
+
Sbjct: 216 FWLE 219
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 1e-18
Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 15/145 (10%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 475
+ + + F D G I + L + + + EI + VD
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLL-RACGQNPTLAEITEI----ESTLPAEVDM 56
Query: 476 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS--- 529
+F+ + + + F+ FD D G I ELR G K S
Sbjct: 57 EQFLQVLNRPNGFDMPGDPEE-FV--KGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEE 113
Query: 530 IDPLLEEADIDKDGRISLSEFRRLL 554
+D LL+ + DG ++ +F +++
Sbjct: 114 MDELLKGVPVK-DGMVNYHDFVQMI 137
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 7e-08
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
+ + F D D G I + E+R L L KL + E+L+ + DG+V
Sbjct: 71 MPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTS-LGEKLSNEEMDELLKGVPVK-DGMV 128
Query: 474 DFSEFV 479
++ +FV
Sbjct: 129 NYHDFV 134
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 1e-18
Identities = 62/255 (24%), Positives = 98/255 (38%), Gaps = 65/255 (25%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
F++R+ + LG G FG Y G++VAVK ++ + D+K+E++
Sbjct: 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIE 75
Query: 149 ILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
IL+ L HEN+VK+ +D + + ME G L + +L
Sbjct: 76 ILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKE---------------YLPKN 119
Query: 207 KDSRYTEKDAAVVVRQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
K+ + ++Q L+ A + VHRD+ N L + + +K
Sbjct: 120 KNK--------INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVL---VESEHQVKIG 168
Query: 260 DFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY 306
DFGL+ I+ K+ YY APE L K SDVWS GV +
Sbjct: 169 DFGLTKAIETDKE--------YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH 220
Query: 307 -ILLCGRRPFWDKTE 320
+L
Sbjct: 221 ELLTYCDSDSSPMAL 235
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 1e-18
Identities = 61/316 (19%), Positives = 108/316 (34%), Gaps = 73/316 (23%)
Query: 99 TIGKLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQ-ALAG 155
+ +L+G G++G Y K + VAVK ++ E I + L
Sbjct: 16 KLLELIGRGRYGAVY----KGSLDERPVAVKVFSFANR------QNFINEKNIYRVPLME 65
Query: 156 HENVVKFYNAFEDDNYV-----YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
H+N+ +F E + ME G L + + ++ +
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLA 125
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
Y + + + HRD+ N L K D + +DFGLS +
Sbjct: 126 Y---------LHTELPRGDHYKPAISHRDLNSRNVLV---KNDGTCVISDFGLSMRLTGN 173
Query: 271 KKFQD---------IVGSAYYVAPEVLK--------RKSGPESDVWSIGVITYILLCG-- 311
+ + VG+ Y+APEVL+ + + D++++G+I + +
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233
Query: 312 -----------RRPFWDK-----TEDGIFKEVLRNK--PDFRRKPWPSISNSAKDFVKKL 353
+ F + T + + V R K P F W S + + K+
Sbjct: 234 DLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA-WKENSLAVRSL-KET 291
Query: 354 LVK----DPRARLTAA 365
+ D ARLTA
Sbjct: 292 IEDCWDQDAEARLTAQ 307
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 1e-18
Identities = 63/276 (22%), Positives = 102/276 (36%), Gaps = 73/276 (26%)
Query: 94 FDR-RYTIGKLLGHGQFGYTYVAT-------DKANGDRVAVKKIEKNKMILPIAVEDVKR 145
F R + T+GK LG G FG +A VAVK ++ + + D+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVS 89
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL-A 204
E+++++ + H+N++ A D +Y+ +E G L + +L A
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE---------------YLRA 134
Query: 205 IRKDSRYTEKDAAVV------VRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAK 251
R D V + ++ + +L +HRD+ N L
Sbjct: 135 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VT 191
Query: 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDV 298
E++ +K DFGL+ +DI YY APE L R +SDV
Sbjct: 192 ENNVMKIADFGLA---------RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 299 WSIGV-----ITYILLCGRRPFWDKTEDGIFKEVLR 329
WS GV T G P+ + +FK +
Sbjct: 243 WSFGVLMWEIFTL----GGSPYPGIPVEELFKLLKE 274
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 2e-18
Identities = 65/276 (23%), Positives = 96/276 (34%), Gaps = 69/276 (25%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
F +RY + LG G FG Y Y T+ G+ VAVK ++ + P K+E+
Sbjct: 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG--PQHRSGWKQEID 85
Query: 149 ILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
IL+ L HE+++K+ ED + + ME G L D +L
Sbjct: 86 ILRTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRD---------------YL--- 126
Query: 207 KDSRYTEKDAAVVVRQMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 263
+ +Q + H +HRD+ N L D +K DFGL
Sbjct: 127 PRHSIGLAQLLLFAQQ---ICEGMAYLHAQHYIHRDLAARNVL---LDNDRLVKIGDFGL 180
Query: 264 SDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILL 309
+ + G + YY APE LK K SDVWS GV Y +L
Sbjct: 181 AKAVPEGHE--------YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
Query: 310 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 345
T+ + ++
Sbjct: 233 HCDSSQSPPTKFLELIGI----------AQGQMTVL 258
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 2e-18
Identities = 52/238 (21%), Positives = 85/238 (35%), Gaps = 53/238 (22%)
Query: 101 GKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
K LG G FG + VAVK ++ P +++ E ++Q L +
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQLD-NPY 79
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAV 218
+V+ + + ME+ E G L +L +++ +K+
Sbjct: 80 IVRMI-GICEAESWMLVMEMAELGPLNK---------------YL--QQNRHVKDKNIIE 121
Query: 219 VVRQMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
+V Q V+ VHRD+ N L K +DFGLS ++
Sbjct: 122 LVHQ---VSMGMKYLEESNFVHRDLAARNVL---LVTQHYAKISDFGLSKALR------- 168
Query: 276 IVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 319
YY APE + K +SDVWS GV+ + G++P+
Sbjct: 169 -ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 2e-18
Identities = 53/240 (22%), Positives = 86/240 (35%), Gaps = 52/240 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALA 154
K+LG G FG Y G++ VA+K++ + P A +++ E ++ ++
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVD 75
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS--AWFLAIRKDSRYT 212
+ +V + V + +L G LLD + + W + I K Y
Sbjct: 76 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E LVHRD+ N L K +K TDFGL+ +
Sbjct: 134 ED------------------RRLVHRDLAARNVL---VKTPQHVKITDFGLAKLLGA--- 169
Query: 273 FQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 319
Y A E + R +SDVWS GV + ++ G +P+
Sbjct: 170 -----EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 2e-18
Identities = 76/333 (22%), Positives = 128/333 (38%), Gaps = 50/333 (15%)
Query: 24 HHRNANKEEAKR---RHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVI 80
HH ++ A + R T ++ T+ ++ GV
Sbjct: 7 HHHHSQDPPAVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVS 66
Query: 81 PCGKRTDFGYDK-DFDR-RYTIGKLLGHGQFGYTYVAT----DKANGD---RVAVKKIEK 131
D K +F R + T+GK LG G FG +A DK VAVK ++
Sbjct: 67 EYELPED---PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 123
Query: 132 NKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK 191
+ + D+ E+++++ + H+N++ A D +Y+ +E G L + L
Sbjct: 124 DAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE-YLRA 180
Query: 192 MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC-HL--HGLVHRDMKPENFLFK 248
+ ++ + + + T KD Q +A +L +HRD+ N L
Sbjct: 181 RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ---LARGMEYLASQKCIHRDLAARNVL-- 235
Query: 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPE 295
E++ +K DFGL+ +DI YY APE L R +
Sbjct: 236 -VTENNVMKIADFGLA---------RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 285
Query: 296 SDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 327
SDVWS GV+ + I G P+ + +FK +
Sbjct: 286 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 318
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 2e-18
Identities = 18/148 (12%), Positives = 46/148 (31%), Gaps = 18/148 (12%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
+E++ + + + G IS++ K L +I +
Sbjct: 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARK-LGLAPSSIDEKKIKELY----GDN 63
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 529
+ + +++ + + D+ + L F FD + G++T +++ G +
Sbjct: 64 LTYEQYL--EYLSICVHDKDNVEE-LI--KMFAHFDNNCTGYLTKSQMKNILTTWGDALT 118
Query: 530 ---IDPLLEEADIDKDGRISLSEFRRLL 554
L + I F +
Sbjct: 119 DQEAIDALNAF--SSEDNIDYKLFCEDI 144
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 3e-07
Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
D+ E +L F D + G ++ +M+ L L + ++ L A ++ +
Sbjct: 81 DNVE--ELIKMFAHFDNNCTGYLTKSQMKNILTT-WGDALTDQEAIDALNAFS--SEDNI 135
Query: 474 DFSEFVAATLH 484
D+ F L
Sbjct: 136 DYKLFCEDILQ 146
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 82.3 bits (203), Expect = 3e-18
Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 30/179 (16%)
Query: 399 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
L + L L +EEL F + G I+ ++ + AK P ++
Sbjct: 14 GALSKEILEELQLNTKFSEEELCSWYQSF--LKDCPTGRITQQQFQSIYAKFFPDTDPKA 71
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+ ++ D N DG +DF E+V A + + +W AF +D+D +G I+
Sbjct: 72 YAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEW------AFSLYDVDGNGTIS 125
Query: 517 PEELR--------------------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
E+ + + + + + D +++ EF
Sbjct: 126 KNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTL 184
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 4e-18
Identities = 51/253 (20%), Positives = 93/253 (36%), Gaps = 42/253 (16%)
Query: 94 FDR-RYTIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKREV 147
+ R + +G G FG + A + VAVK +++ D +RE
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREA 101
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
++ + N+VK + + E G+L + + + T + + +
Sbjct: 102 ALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 160
Query: 208 DSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATD 260
+ + + L +A + +L VHRD+ N L E+ +K D
Sbjct: 161 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL---VGENMVVKIAD 217
Query: 261 FGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY- 306
FGLS ++I + YY PE + + ESDVW+ GV+ +
Sbjct: 218 FGLS---------RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE 268
Query: 307 ILLCGRRPFWDKT 319
I G +P++
Sbjct: 269 IFSYGLQPYYGMA 281
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 6e-18
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 19/118 (16%)
Query: 449 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 508
LK + + L A+ +G + +F A + + + +D ++ F+ D
Sbjct: 3 AKDLLKADDIKKALDAVK--AEGSFNHKKFFA-LVGLKAMSAND-----VK--KVFKAID 52
Query: 509 IDRDGFITPEELRM------HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 557
D GFI EEL+ G + L+ AD D DG+I + EF L+ A
Sbjct: 53 ADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 8e-11
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 406 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQ 463
+ D++ F AID D +G I EE++ L L ++ L+
Sbjct: 31 FALVGLKAMSAN--DVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLK 88
Query: 464 AIDCNTDGLVDFSEFVA 480
A D + DG + EF
Sbjct: 89 AADKDGDGKIGIDEFET 105
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 8e-18
Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 28/179 (15%)
Query: 397 KYSRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 454
K S+L + L L + D E+ F +G ++ E+ + + P+
Sbjct: 4 KTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDC--PSGQLAREDFVKIYKQFFPFGSP 61
Query: 455 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 514
E + D + +G + F EF+ + + + AFE +D++ DG+
Sbjct: 62 EDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE------KLSWAFELYDLNHDGY 115
Query: 515 ITPEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
IT +E+ + + + + D ++DG I+L EFR +
Sbjct: 116 ITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK 174
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 1e-17
Identities = 35/161 (21%), Positives = 60/161 (37%), Gaps = 26/161 (16%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
EL L F +G ++ E +Q A+ P + + A D G
Sbjct: 15 FTKRELQVLYRGFKNEX--PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 72
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---------- 522
V F +FV A + + H+ +W F +DI++DG+I EE+
Sbjct: 73 VKFEDFVTALSILLRGTVHEKLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMG 126
Query: 523 --------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
+ +D ++ D +KDG ++L EF +
Sbjct: 127 KYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQ 167
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 2e-17
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 19/113 (16%)
Query: 452 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 511
L ++ V L+A + ++ F A + + + AF D D+
Sbjct: 6 ILADADVAAALKACE--AADSFNYKAFFAKVGLTAKSADDIKK--------AFFVIDQDK 55
Query: 512 DGFITPEELR--MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLR 555
GFI +EL+ + G+ L+ D D DG I + E+ L++
Sbjct: 56 SGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 4e-11
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 467
L + D++ F ID DK+G I +E++ L L ++ L+A D
Sbjct: 33 KVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDS 92
Query: 468 NTDGLVDFSEFVA 480
+ DG + E+ A
Sbjct: 93 DGDGAIGVDEWAA 105
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 3e-17
Identities = 51/266 (19%), Positives = 90/266 (33%), Gaps = 66/266 (24%)
Query: 90 YDKDFDRRY-TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKR 145
+++G G FG Y T N + AVK + + V
Sbjct: 18 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--IGEVSQFLT 75
Query: 146 EVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E I++ H NV+ + + + + G+L + F+
Sbjct: 76 EGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN---------------FI- 118
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLK 257
R ++ V+ ++ + +L VHRD+ N + E ++K
Sbjct: 119 -RNETH------NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM---LDEKFTVK 168
Query: 258 ATDFGLSDFIKPGKKFQDIVGSAYYV--------------APEVLK-RKSGPESDVWSIG 302
DFGL+ +D+ YY A E L+ +K +SDVWS G
Sbjct: 169 VADFGLA---------RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 219
Query: 303 VITY-ILLCGRRPFWDKTEDGIFKEV 327
V+ + ++ G P+ D I +
Sbjct: 220 VLLWELMTRGAPPYPDVNTFDITVYL 245
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 4e-17
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 18/106 (16%)
Query: 460 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 518
+I A+ C ++ F + + + ++ F D D+ GFI E
Sbjct: 11 DIESALSSCQAADSFNYKSFFSTVGLSSKTPDQ------IK--KVFGILDQDKSGFIEEE 62
Query: 519 ELR---MHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 555
EL+ + L D D DG+I + EF+ L++
Sbjct: 63 ELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 1e-11
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 467
L + ++ F +D DK+G I EE++ L L + L A D
Sbjct: 33 TVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDT 92
Query: 468 NTDGLVDFSEFVA 480
+ DG + EF +
Sbjct: 93 DGDGKIGVEEFQS 105
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 5e-17
Identities = 60/303 (19%), Positives = 102/303 (33%), Gaps = 75/303 (24%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQ 108
H H H + N Q+ P GK D ++ +GK +G G
Sbjct: 2 HHHHHHSSGVDLG--------TENLYFQSMPFPEGKVLDDM----EGNQWVLGKKIGSGG 49
Query: 109 FGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYN-- 164
FG Y+A ++ A K+E + + E+K Q +A + + K+
Sbjct: 50 FGLIYLAFPTNKPEKDARHVVKVEYQE------NGPLFSELKFYQRVAKKDCIKKWIERK 103
Query: 165 ----------------AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
F+ +Y ++ ME G L +I ++
Sbjct: 104 QLDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQKIS----------------GQN 145
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
+ + + +ML V H + VH D+K N L K + D+GLS
Sbjct: 146 GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL-GYKNPDQVYLADYGLSYRYC 204
Query: 269 PGKKFQDI--------VGSAYYVAPEVLKRKSGPE----SDVWSIG-VITYILLCGRRPF 315
P + G+ + + + K G SDV +G + LCG+ P
Sbjct: 205 PNGNHKQYQENPRKGHNGTIEFTSLDAHK---GVALSRRSDVEILGYCMLR-WLCGKLP- 259
Query: 316 WDK 318
W++
Sbjct: 260 WEQ 262
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 5e-17
Identities = 53/249 (21%), Positives = 91/249 (36%), Gaps = 42/249 (16%)
Query: 94 FDRRY-TIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKREV 147
+ LG +FG Y A G+ VA+K ++ E+ + E
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE--GPLREEFRHEA 63
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
+ L H NVV D + + C G+L + L + +
Sbjct: 64 MLRARLQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE-FLVMRSPHSDVGSTDDDRTV 121
Query: 208 DSRYTEKDAAVVVRQMLRVAAEC-HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
S D +V Q +AA +L H +VH+D+ N L + ++K +D GL
Sbjct: 122 KSALEPPDFVHLVAQ---IAAGMEYLSSHHVVHKDLATRNVL---VYDKLNVKISDLGLF 175
Query: 265 DFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLC 310
+++ + YY APE + K +SD+WS GV+ + +
Sbjct: 176 ---------REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 226
Query: 311 GRRPFWDKT 319
G +P+ +
Sbjct: 227 GLQPYCGYS 235
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 5e-17
Identities = 51/241 (21%), Positives = 87/241 (36%), Gaps = 54/241 (22%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALA 154
K+LG G FG + G+ V +K IE + + V + + +L
Sbjct: 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSLD 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA---KMISTTLTSAWFLAIRKDSRY 211
H ++V+ + + + + G LLD + + L + W + I K Y
Sbjct: 74 -HAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLLN-WGVQIAKGMYY 130
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
E+ HG+VHR++ N L K S ++ DFG++D + P
Sbjct: 131 LEE------------------HGMVHRNLAARNVL---LKSPSQVQVADFGVADLLPP-- 167
Query: 272 KFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 318
+ A E + K +SDVWS GV + ++ G P+
Sbjct: 168 ------DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 221
Query: 319 T 319
Sbjct: 222 R 222
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 6e-17
Identities = 62/259 (23%), Positives = 101/259 (38%), Gaps = 64/259 (24%)
Query: 94 FDR-RYTIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKMILPIAVEDVKREV 147
R + LG G FG + + VAVK + K A +D +RE
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL---KEASESARQDFQREA 94
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL-AIR 206
++L L H+++V+F+ + + + E G+L FL +
Sbjct: 95 ELLTMLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR---------------FLRSHG 138
Query: 207 KDSRYTEKDAAVV-----VRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDS 254
D++ V + Q+L VA++ +L VHRD+ N L +
Sbjct: 139 PDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGL 195
Query: 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSI 301
+K DFG+S +DI + YY PE + RK ESDVWS
Sbjct: 196 VVKIGDFGMS---------RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 246
Query: 302 GVITY-ILLCGRRPFWDKT 319
GV+ + I G++P++ +
Sbjct: 247 GVVLWEIFTYGKQPWYQLS 265
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 1e-16
Identities = 54/241 (22%), Positives = 85/241 (35%), Gaps = 54/241 (22%)
Query: 99 TIGKL-LGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
I + LG G FG + + VA+K +++ E++ RE +I+ L
Sbjct: 12 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQLD- 68
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
+ +V+ + + ME+ GG L FL + K +
Sbjct: 69 NPYIVRLI-GVCQAEALMLVMEMAGGGPLHK---------------FL-VGKREEIPVSN 111
Query: 216 AAVVVRQMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
V + +V+ VHRD+ N L K +DFGLS +
Sbjct: 112 ---VAELLHQVSMGMKYLEEKNFVHRDLAARNVL---LVNRHYAKISDFGLSKALG---- 161
Query: 273 FQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 318
+YY APE + RK SDVWS GV + L G++P+
Sbjct: 162 ----ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217
Query: 319 T 319
Sbjct: 218 K 218
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 2e-16
Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 12/111 (10%)
Query: 455 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 514
E +L T + + + + +++ + L F
Sbjct: 2 EPTEKSMLLETTSTTKMETKYEDML--PVMAEKMDVEEFVS-ELC--KGFSLLADPERHL 56
Query: 515 ITPEELRMHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLRTAS 558
IT E LR ++G+ G ++ E D+D DG ++ +EF L+ S
Sbjct: 57 ITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLS 107
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-08
Identities = 14/83 (16%), Positives = 35/83 (42%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
+E +++L F + + I+ E +R+ + + +++ D + DG +
Sbjct: 35 VEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGAL 94
Query: 474 DFSEFVAATLHVHQLEEHDSEKW 496
+ +EF + + D+E W
Sbjct: 95 NQTEFCVLMVRLSPEMMEDAETW 117
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 2e-16
Identities = 53/258 (20%), Positives = 93/258 (36%), Gaps = 65/258 (25%)
Query: 99 TIGKLLGHGQFGYTY--VATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+++G G FG Y D+A + A+K + + VE RE +++ L
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE--MQQVEAFLREGLLMRGLN- 80
Query: 156 HENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H NV+ + ++ + G+LL F+ R R
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQ---------------FI--RSPQR---- 119
Query: 215 DAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
V+ ++ + +L VHRD+ N + E ++K DFGL+
Sbjct: 120 --NPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCM---LDESFTVKVADFGLA--- 171
Query: 268 KPGKKFQDIVGSAYYV--------------APEVLK-RKSGPESDVWSIGVITY-ILLCG 311
+DI+ YY A E L+ + +SDVWS GV+ + +L G
Sbjct: 172 ------RDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRG 225
Query: 312 RRPFWDKTEDGIFKEVLR 329
P+ + + +
Sbjct: 226 APPYRHIDPFDLTHFLAQ 243
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 2e-16
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 401 LKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE 460
+ L + D EELA LR F A D +++G + EE R + L ++ +
Sbjct: 9 SGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTE-LR--VRPADAEA 65
Query: 461 ILQAIDCNTDGLVDFSEFVA 480
+ Q +D + DG + F EF
Sbjct: 66 VFQRLDADRDGAITFQEFAR 85
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 9e-12
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 482 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS-IDPLLEEA 537
L+ + E LR + F D +R G + EE R ++ + + + +
Sbjct: 13 NLYFQGADGDGEELARLR--SVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRL 70
Query: 538 DIDKDGRISLSEFRRLLRTA 557
D D+DG I+ EF R +
Sbjct: 71 DADRDGAITFQEFARGFLGS 90
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 80.2 bits (198), Expect = 2e-16
Identities = 54/345 (15%), Positives = 104/345 (30%), Gaps = 66/345 (19%)
Query: 11 SGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQK 70
G ++++ R + + + K + Q
Sbjct: 3 PIDPMGHHHHHHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGAN 62
Query: 71 TNSRRQTGVIPCGKRTDFGYDKDFDRRY-TIGKLLGHGQFGYTY--VATDKANGD-RVAV 126
T + + P + +++G G FG Y D AV
Sbjct: 63 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 122
Query: 127 KKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELL 185
K + + V E I++ + H NV+ + + + + G+L
Sbjct: 123 KSLNRITD--IGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 179
Query: 186 DRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHR 238
+ F+ R ++ V+ ++ + L VHR
Sbjct: 180 N---------------FI--RNETH------NPTVKDLIGFGLQVAKGMKFLASKKFVHR 216
Query: 239 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------------A 284
D+ N + E ++K DFGL+ +D+ + A
Sbjct: 217 DLAARNCM---LDEKFTVKVADFGLA---------RDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 285 PEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 327
E L+ +K +SDVWS GV+ + ++ G P+ D I +
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 309
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 3e-16
Identities = 28/148 (18%), Positives = 54/148 (36%), Gaps = 27/148 (18%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR--------VLEILQAIDC 467
EE+ R F + + +S E+ L K + + + + ++ +D
Sbjct: 1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVV-TRHPDLKTDGFGIDTCRSMVAVMDS 58
Query: 468 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-----M 522
+T G + F EF ++ + QA +++FD+DR G I EL
Sbjct: 59 DTTGKLGFEEFKYLWNNIKKW------------QAIYKQFDVDRSGTIGSSELPGAFEAA 106
Query: 523 HTGLKGSIDPLLEEADIDKDGRISLSEF 550
L + ++ D+ G + F
Sbjct: 107 GFHLNEHLYSMIIRRYSDEGGNMDFDNF 134
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 1e-12
Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 32/148 (21%)
Query: 387 SVLNNMRQFVKYSRLKQFALRALAS-----------TLDDEE-------LADLRDQFDAI 428
++LN + + F + S L EE + + +
Sbjct: 27 NILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKQF 86
Query: 429 DVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488
DVD++G+I E+ A + + L E + ++ + G +DF F++ + + +
Sbjct: 87 DVDRSGTIGSSELPGAF-EAAGFHLNE-HLYSMIIRRYSDEGGNMDFDNFISCLVRLDAM 144
Query: 489 EEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
AF+ D D G I
Sbjct: 145 FR------------AFKSLDKDGTGQIQ 160
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 3e-16
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 65/260 (25%)
Query: 94 FDRRY-TIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
RR + + LG G FG ++A + VAVK ++ + A +D +RE
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA---ARKDFQREA 68
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFL---- 203
++L L HE++VKFY D + + + E + G+L FL
Sbjct: 69 ELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNK---------------FLRAHG 112
Query: 204 ---AIRKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKED 253
I D + + + + QML +A++ +L VHRD+ N L +
Sbjct: 113 PDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCL---VGAN 169
Query: 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWS 300
+K DFG+S +D+ + YY PE + RK ESDVWS
Sbjct: 170 LLVKIGDFGMS---------RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 220
Query: 301 IGVITY-ILLCGRRPFWDKT 319
GVI + I G++P++ +
Sbjct: 221 FGVILWEIFTYGKQPWFQLS 240
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 3e-15
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 467
S L + ++D F ID D++G + +E++ L K +L ES ++ A D
Sbjct: 32 TSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADN 91
Query: 468 NTDGLVDFSEFVA 480
+ DG + EF
Sbjct: 92 DGDGKIGADEFQE 104
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 4e-13
Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 18/107 (16%)
Query: 460 EILQAID-CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 518
+I A+ C + +F + S+ + + F D D+ G++ +
Sbjct: 10 DIAAALQECQDPDTFEPQKFFQTS--------GLSKMSASQVKDIFRFIDNDQSGYLDGD 61
Query: 519 ELRM---HTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 556
EL+ L++ AD D DG+I EF+ ++ +
Sbjct: 62 ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 77.3 bits (190), Expect = 4e-15
Identities = 63/343 (18%), Positives = 103/343 (30%), Gaps = 67/343 (19%)
Query: 10 VSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQER--AKNYQQLKTKQ 67
V ++ A A H H +R T +
Sbjct: 236 VEYLKLKADGLIYCLKEACPNSSASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPE 295
Query: 68 HQKTNSRRQTGVIPCGKRTDFGYDKDF------------DRRYTIGKLLGHGQFGYTYVA 115
+ S + +P D D LG G FG
Sbjct: 296 PARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQG 355
Query: 116 TDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173
+ + VA+K +++ E++ RE +I+ L + +V+ +
Sbjct: 356 VYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQL-DNPYIVRLI-GVCQAEALM 411
Query: 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH-- 231
+ ME+ GG L FL +++ E + V + +V+
Sbjct: 412 LVMEMAGGGPLHK---------------FLVGKRE----EIPVSNVAELLHQVSMGMKYL 452
Query: 232 -LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------- 283
VHR++ N L K +DFGLS + +YY
Sbjct: 453 EEKNFVHRNLAARNVL---LVNRHYAKISDFGLSKALG--------ADDSYYTARSAGKW 501
Query: 284 -----APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 319
APE + RK SDVWS GV + L G++P+
Sbjct: 502 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 67.9 bits (167), Expect = 1e-14
Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E+ ++++ FD D +K GSI E++ A+ L + +K+ +LE++ D +G
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRA-LGFDVKKPEILELMNEYDREGNGY 59
Query: 473 VDFSEFVAATLHVHQLEEHD 492
+ F +F+ + +++ D
Sbjct: 60 IGFDDFL--DIMTEKIKNRD 77
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 1e-08
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 501 QAAFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEF 550
+ AF+ FD ++ G I EL+ M G I L+ E D + +G I +F
Sbjct: 10 KEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDF 65
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 1e-14
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 23/139 (16%)
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDGLVDFS 476
L F ++ ++G I +E+++ L + ++ +D + G + F+
Sbjct: 4 LYGYFASVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62
Query: 477 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPL 533
EF ++ + F FD DR G + P+EL+ G + +
Sbjct: 63 EFKELWAVLNGW------------RQHFISFDSDRSGTVDPQELQKALTTMGFRLN-PQT 109
Query: 534 LEE--ADIDKDGRISLSEF 550
+ G+I+ ++
Sbjct: 110 VNSIAKRYSTSGKITFDDY 128
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-10
Identities = 26/145 (17%), Positives = 52/145 (35%), Gaps = 30/145 (20%)
Query: 387 SVLNNMRQFVKYSRLKQFALRALAS--------TLDDEE-------LADLRDQFDAIDVD 431
L Y R + S T+ E L R F + D D
Sbjct: 25 RCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSD 84
Query: 432 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 491
++G++ +E+++AL + ++L V I + T G + F +++A + + L +
Sbjct: 85 RSGTVDPQELQKAL-TTMGFRLNPQTVNSIAKRYS--TSGKITFDDYIACCVKLRALTD- 140
Query: 492 DSEKWHLRSQAAFEKFDIDRDGFIT 516
+F + D + G +
Sbjct: 141 -----------SFRRRDSAQQGMVN 154
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 12/64 (18%)
Query: 501 QAAFEKFDIDRDGFITPEELRM---HTGLKGSIDP--------LLEEADIDKDGRISLSE 549
F +DG I +EL+ +G+ G P ++ D D G + +E
Sbjct: 5 YGYFASVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNE 63
Query: 550 FRRL 553
F+ L
Sbjct: 64 FKEL 67
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-14
Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 19/114 (16%)
Query: 452 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 511
L S + L+ DC +F + + E F D D+
Sbjct: 5 ILSPSDIAAALR--DCQAPDSFSPKKFFQISGMSKKSSSQLKE--------IFRILDNDQ 54
Query: 512 DGFITPEELR--MHT-GLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 556
GFI +EL+ + L AD D DG+I EF+ ++++
Sbjct: 55 SGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQS 108
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 4e-14
Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Query: 385 DISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQA 444
+ +R ++ + + + L++ F +D D++G I +E++
Sbjct: 8 PSDIAAALRDCQAPDSFSPKKFFQISG-MSKKSSSQLKEIFRILDNDQSGFIEEDELKYF 66
Query: 445 LAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 480
L + L S L A D + DG + EF
Sbjct: 67 LQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQE 104
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 3e-14
Identities = 34/244 (13%), Positives = 67/244 (27%), Gaps = 49/244 (20%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKR-TDFGYDKDFDRRYTIGKLLGHG 107
H H H + T S +P G TD R++ +
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMTTSLEA---LPTGTVLTDK-----SGRQWKLKSFQTRD 53
Query: 108 QFGYTYVATDKANGD--------RVAVKKIEKNKMILPIAVEDVKREVKILQALA----- 154
G Y A + + ++K ++ L +R K LQ
Sbjct: 54 NQGILYEAAPTSTLTCDSGPQKQKFSLK-LDAKDGRLFNEQNFFQRAAKPLQVNKWKKLY 112
Query: 155 --GHENVVKFY-NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
+ D Y ++ + +L SA ++ +
Sbjct: 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL--------------GRSLQSALDVSPKH--VL 156
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+E+ V ++L H + VH ++ EN + S + +G +
Sbjct: 157 SERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQ-SQVTLAGYGFA------F 209
Query: 272 KFQD 275
++
Sbjct: 210 RYCP 213
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 7e-14
Identities = 38/167 (22%), Positives = 62/167 (37%), Gaps = 34/167 (20%)
Query: 413 LDDEELADLRDQF--------DAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 464
L +E+ +F +++ + E++ KE I +
Sbjct: 14 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELK-ANPFKE----RICRV 68
Query: 465 IDCNT-DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 521
+ + F +F+ L V K H AF FD D DG + E+L
Sbjct: 69 FSTSPAKDSLSFEDFLDL-LSVFSDTATPDIKSHY----AFRIFDFDDDGTLNREDLSRL 123
Query: 522 ------MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLR 555
+ S ID +LEE+DID+DG I+LSEF+ ++
Sbjct: 124 VNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 170
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 9/94 (9%)
Query: 406 LRALASTLDDEELAD-LRDQFDAIDVDKNGSISLEEMRQAL--------AKDLPWKLKES 456
L L+ D F D D +G+++ E++ + + L +
Sbjct: 84 LDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ 143
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490
+ IL+ D + DG ++ SEF
Sbjct: 144 LIDNILEESDIDRDGTINLSEFQHVISRSPDFAS 177
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 71.9 bits (176), Expect = 1e-13
Identities = 73/323 (22%), Positives = 112/323 (34%), Gaps = 92/323 (28%)
Query: 90 YDKD---FDR-RYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIA----V 140
YD F R R +GK LG G FG A A G D+ A + KM+ A
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEAD--AFGIDKTATCRTVAVKMLKEGATHSEH 69
Query: 141 EDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAK-------- 191
+ E+KIL + H NVV A + + + +E C+ G L + +K
Sbjct: 70 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 129
Query: 192 -------------------------MISTTLTSAWFLAIRKDS---------RYTEKDAA 217
I+++ +SA + + S
Sbjct: 130 TKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDF 189
Query: 218 VVVRQMLRVAAEC-----HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
+ + ++ + + L +HRD+ N L E + +K DFGL+
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLA------ 240
Query: 271 KKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFW 316
+DI YV APE + R +SDVWS GV+ + I G P+
Sbjct: 241 ---RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 297
Query: 317 DKTEDGIFKEVLRN-----KPDF 334
D F L+ PD+
Sbjct: 298 GVKIDEEFCRRLKEGTRMRAPDY 320
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 1e-13
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
+D + +L++ F D D+NG IS E+R + +L KL + V ++++ D + DG
Sbjct: 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVM-INLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 473 VDFSEFVAATLHVHQLEEHDSEK 495
V++ EFV + V +
Sbjct: 62 VNYEEFVKMMMTVRGGGGGNGWS 84
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 3e-11
Identities = 24/77 (31%), Positives = 49/77 (63%), Gaps = 10/77 (12%)
Query: 487 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADID 540
++ D+E+ L+ AF+ FD D++G+I+ ELR ++ G K + ++ +++EAD+D
Sbjct: 2 HMDT-DAEE-ELK--EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD 57
Query: 541 KDGRISLSEFRRLLRTA 557
DG+++ EF +++ T
Sbjct: 58 GDGQVNYEEFVKMMMTV 74
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 1e-13
Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 19/118 (16%)
Query: 449 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 508
+ L + + + A D +F + + D K F D
Sbjct: 2 MTDLLSAEDIKKAIGA--FTAADSFDHKKFFQMV--GLKKKSADDVK------KVFHILD 51
Query: 509 IDRDGFITPEELR--MHT-GLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA 557
D+ GFI +EL + L+ D D DG+I + EF L+ +
Sbjct: 52 KDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 2e-13
Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 3/103 (2%)
Query: 380 SEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLE 439
+++ + + F + L + D++ F +D DK+G I +
Sbjct: 3 TDLLSAEDIKKAIGAFTAADSFDHKKFFQMVG-LKKKSADDVKKVFHILDKDKSGFIEED 61
Query: 440 EMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 480
E+ L L ++ A D + DG + EF
Sbjct: 62 ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFST 104
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 2e-13
Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 23/154 (14%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAI 465
+ L F A ++G I +E+++ L + ++ +
Sbjct: 24 GPAFPGQTQDPLYGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSML 82
Query: 466 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM--- 522
D + G + F+EF ++ + F FD DR G + P+EL+
Sbjct: 83 DRDMSGTMGFNEFKELWAVLNGW------------RQHFISFDTDRSGTVDPQELQKALT 130
Query: 523 HTGLKGSIDPLLEE--ADIDKDGRISLSEFRRLL 554
G + S + +G+I+ ++
Sbjct: 131 TMGFRLS-PQAVNSIAKRYSTNGKITFDDYIACC 163
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 1e-09
Identities = 26/145 (17%), Positives = 53/145 (36%), Gaps = 30/145 (20%)
Query: 387 SVLNNMRQFVKYSRLKQFALRALAS--------TLDDEE-------LADLRDQFDAIDVD 431
L Y R + S T+ E L R F + D D
Sbjct: 56 RCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTD 115
Query: 432 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 491
++G++ +E+++AL + ++L V I + T+G + F +++A + + L +
Sbjct: 116 RSGTVDPQELQKAL-TTMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACCVKLRALTD- 171
Query: 492 DSEKWHLRSQAAFEKFDIDRDGFIT 516
+F + D + G +
Sbjct: 172 -----------SFRRRDTAQQGVVN 185
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 2e-13
Identities = 45/185 (24%), Positives = 71/185 (38%), Gaps = 38/185 (20%)
Query: 397 KYSRLKQFALRALAST--LDDEELADLRDQF--------DAIDVDKNGSISLEEMRQALA 446
SRL + L L +E+ +F +++ + E+
Sbjct: 27 SGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQ-----I 81
Query: 447 KDLPWKLKESRVLE-ILQAIDCNT-DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 504
LP +LK + E I + + + F +F+ L V K H AF
Sbjct: 82 LSLP-ELKANPFKERICRVFSTSPAKDSLSFEDFLDL-LSVFSDTATPDIKSHY----AF 135
Query: 505 EKFDIDRDGFITPEELR--------MHTGLKGS-------IDPLLEEADIDKDGRISLSE 549
FD D DG + E+L + S ID +LEE+DID+DG I+LSE
Sbjct: 136 RIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSE 195
Query: 550 FRRLL 554
F+ ++
Sbjct: 196 FQHVI 200
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 72.6 bits (177), Expect = 2e-13
Identities = 97/633 (15%), Positives = 174/633 (27%), Gaps = 199/633 (31%)
Query: 37 HNHHARNDT-THKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFD 95
H+HH D T +HQ+Q+++ ++ F +FD
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSVFED------------------------AF--VDNFD 34
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ + + + + I ++ AV R L L+
Sbjct: 35 CKDVQDMPKS--------ILSKEE------IDHI----IMSKDAVSGTLRLFWTL--LSK 74
Query: 156 HENVVK-FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
E +V+ F NY + L+ I + ++ + ++ R D Y +
Sbjct: 75 QEEMVQKFVEEVLRINYKF----------LMSPIKTEQRQPSMMTRMYIEQR-DRLYNDN 123
Query: 215 DAAV---VVR-----------QMLRVAAECHLHGL-----------VHRDMKPE-NFLFK 248
V R LR A + G+ V K + FK
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183
Query: 249 --------SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-------LKRKSG 293
++ L+ L D + + LK K
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243
Query: 294 PES-----DVWSIGVITY------ILLCGRRPFWDK--TEDGIFKEVLRNKPDFRRKPWP 340
+V + ILL R K T+ D
Sbjct: 244 ENCLLVLLNVQNAKAWNAFNLSCKILLTTR----FKQVTDFLSAATTTHISLDHHSMTL- 298
Query: 341 SISNSAKDFVKKLLVKD---PRARLTAAQALS-HPWVREGGDASEIPIDISVLNNMRQFV 396
+ +K L + PR + L+ +P S I I
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPR------EVLTTNPRR-----LSIIAESIRDGLATWDNW 347
Query: 397 KYSRLKQFALRALASTLDDEELADLRDQFDAIDV-DKNGSISLEEMRQALAKDLPW-KLK 454
K+ + + S+L+ E A+ R FD + V + I L+ L W +
Sbjct: 348 KHVNCDKLT-TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT----ILLS--LIWFDVI 400
Query: 455 ESRVLEILQAIDCNTDGLV--DFSEFVAATLHVHQLEE----------HDS--------- 493
+S V+ ++ + LV E ++ LE H S
Sbjct: 401 KSDVMVVVN--KLHKYSLVEKQPKESTI-SIPSIYLELKVKLENEYALHRSIVDHYNIPK 457
Query: 494 --EKW-----------------HLRSQAAFEKFDIDRD-----GFITPEELRMHTGL--- 526
+ HL++ E+ + R F+ +++R H
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE-QKIR-HDSTAWN 515
Query: 527 -KGSIDPLLEEADIDKDGRISLSE--FRRLLRT 556
GSI L++ K I ++ + RL+
Sbjct: 516 ASGSILNTLQQLKFYKP-YICDNDPKYERLVNA 547
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 7e-13
Identities = 44/254 (17%), Positives = 77/254 (30%), Gaps = 60/254 (23%)
Query: 96 RRYTIGKLLGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
+ +G +G G FG Y+A + VK + L E+K
Sbjct: 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPL-------FTELKFY 87
Query: 151 QALAGHENVVKFYNA------------------FEDDNYVYIAMELCEGGELLDRILAKM 192
Q A E + K+ +Y ++ M+ G L +I
Sbjct: 88 QRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF--GSDLQKIYEA- 144
Query: 193 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252
R++ K + ++L + H H VH D+K N L + K
Sbjct: 145 --------------NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL-NYKN 189
Query: 253 DSSLKATDFGLSDFIKPGKKFQDI--------VGSAYYVAPEV-LKRKSGPESDVWSIG- 302
+ D+GL+ P + G+ + + + D+ +G
Sbjct: 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGY 249
Query: 303 VITYILLCGRRPFW 316
+ L G P W
Sbjct: 250 CMIQ-WLTGHLP-W 261
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 8e-13
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 480
F IDV+ +G++S EE++ + E + I ++ID + +G +D +EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFV-SKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
Query: 481 A 481
Sbjct: 61 F 61
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 3e-10
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 554
+A F++ D++ DG ++ EE++ K + + + + D D +G I +EF +
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 555 RT 556
+
Sbjct: 63 GS 64
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 3e-05
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 405 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA 446
+ + +++ L + F +ID D NG I E +
Sbjct: 25 FVSKKRAIKNEQLLQLI---FKSIDADGNGEIDQNEFAKFYG 63
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 1e-12
Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 23/139 (16%)
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALA----KDLPWKLKESRVLEILQAIDCNTDGLVDFS 476
+ F A+ ++G + EE+++ L ++ +D + G + F+
Sbjct: 2 VYTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 477 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPL 533
F + W + F D D G + ELR G + S
Sbjct: 61 AFKELWAAL--------NAW----KENFMTVDQDGSGTVEHHELRQAIGLMGYRLS-PQT 107
Query: 534 LEE--ADIDKDGRISLSEF 550
L K+GRI ++
Sbjct: 108 LTTIVKRYSKNGRIFFDDY 126
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 8e-11
Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 30/145 (20%)
Query: 387 SVLNNMRQFVKYSRLKQFALRALAS--------TLDDEE-------LADLRDQFDAIDVD 431
L YS R + + + L ++ F +D D
Sbjct: 23 RCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQD 82
Query: 432 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 491
+G++ E+RQA+ + ++L + I++ +G + F ++VA + + L +
Sbjct: 83 GSGTVEHHELRQAI-GLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCVKLRALTD- 138
Query: 492 DSEKWHLRSQAAFEKFDIDRDGFIT 516
F K D + G
Sbjct: 139 -----------FFRKRDHLQQGSAN 152
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 12/64 (18%)
Query: 501 QAAFEKFDIDRDGFITPEELRM---HTGLKGSIDP--------LLEEADIDKDGRISLSE 549
F +DG + EEL+ +G+ G+ P ++ D D G++ +
Sbjct: 3 YTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNA 61
Query: 550 FRRL 553
F+ L
Sbjct: 62 FKEL 65
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 62.1 bits (152), Expect = 1e-12
Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEF 478
+ + F+ D +K+G +SL+E R+ + +++ + ID + +G ++ EF
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVA-LAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
Query: 479 VA 480
+
Sbjct: 60 TS 61
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 57.1 bits (139), Expect = 7e-11
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 501 QAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLL 554
+ FEKFD ++DG ++ +E R + + I EE D+D +G ++ EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Query: 555 R 555
Sbjct: 64 E 64
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 1e-12
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 473 VDFSEFVA 480
+DF EF+
Sbjct: 73 IDFEEFLV 80
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 5e-09
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 501 QAAFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEFRRL 553
+AAF+ FD D G I+ +EL M G + +D ++EE D D G I EF +
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 1e-12
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 402 KQFALRALASTLDD---EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 458
A R + + L + +F+ D K +IS EE R + L + +
Sbjct: 4 MATADRDILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQF 62
Query: 459 LEILQAIDCNTDGLVDFSEFVAA 481
+ + N G + + +F++
Sbjct: 63 DRLWNEMPVNAKGRLKYPDFLSR 85
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 6e-10
Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 17/97 (17%)
Query: 479 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDP 532
+ A LH + S + FE FD + I+ EE R + D
Sbjct: 11 ILARLH----KAVTSHYHAIT--QEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDR 64
Query: 533 LLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPS 569
L E ++ GR+ +F + SS +
Sbjct: 65 LWNEMPVNAKGRLKYPDF-----LSRFSSETAATPMA 96
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 2e-12
Identities = 11/92 (11%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 392 MRQFVKYSRLKQFAL---RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 448
+Q + + + L + + +L ++++ D++ NG I + +++ L K
Sbjct: 2 AQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK- 60
Query: 449 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 480
L + +++ + + + +F+
Sbjct: 61 LGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-08
Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Query: 503 AFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 555
+ +FD++ +G I L+ + G+ + + L+ E S +F R++
Sbjct: 37 KYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML 95
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 3e-12
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-DLPWKLKESRVLEILQAIDCN 468
A+ +++AD F D + +G IS E+ AL V ++ ID +
Sbjct: 2 AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSV---TPDEVRRMMAEIDTD 58
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSE 494
DG + F EF L + S+
Sbjct: 59 GDGFISFDEFTDFARANRGLVKDVSK 84
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 5e-09
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRL 553
+ F++FD + DG I+ EL LK + ++ E D D DG IS EF
Sbjct: 14 ERIFKRFDTNGDGKISSSELG--DALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDF 71
Query: 554 LRTASISSRNV 564
R ++V
Sbjct: 72 ARANRGLVKDV 82
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 3e-12
Identities = 13/73 (17%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-----DLPWKLKESRVLEILQAIDC 467
+ + A+L F +D + +G ++ E++ + L + ++++ D
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60
Query: 468 NTDGLVDFSEFVA 480
N+DG + EF+
Sbjct: 61 NSDGKISKEEFLN 73
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 2e-11
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 12/65 (18%)
Query: 501 QAAFEKFDIDRDGFITPEELR--MHT-GLKGS---------IDPLLEEADIDKDGRISLS 548
+AAF+K D + DG++T EL+ M T + L++ AD + DG+IS
Sbjct: 10 EAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKE 69
Query: 549 EFRRL 553
EF
Sbjct: 70 EFLNA 74
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 60.6 bits (148), Expect = 4e-12
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 475
L DL+ F A D D +G I+++E+R+A+ L L + + +++ D + DG V++
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAM-AGLGQPLPQEELDAMIREADVDQDGRVNY 61
Query: 476 SEFVA 480
EF
Sbjct: 62 EEFAR 66
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 3e-11
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRI 545
+ L+ AF FD D DG IT +ELR G +D ++ EAD+D+DGR+
Sbjct: 3 AGLE-DLQ--VAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRV 59
Query: 546 SLSEFRRLLR 555
+ EF R+L
Sbjct: 60 NYEEFARMLA 69
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 7e-12
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 474 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS- 529
E + +++ DSE+ +R AF D D +G+I+ ELR + G K +
Sbjct: 11 SSGENLYFQSL---MKDTDSEE-EIR--EAFRVEDKDGNGYISAAELRHVMTNLGEKLTD 64
Query: 530 --IDPLLEEADIDKDGRISLSEFRRLL 554
+D ++ EADID DG+++ EF +++
Sbjct: 65 EEVDEMIREADIDGDGQVNYEEFVQMM 91
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 1e-10
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
D EE ++R+ F D D NG IS E+R + +L KL + V E+++ D + DG V
Sbjct: 26 DSEE--EIREAFRVEDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQV 82
Query: 474 DFSEFVA 480
++ EFV
Sbjct: 83 NYEEFVQ 89
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 4e-11
Identities = 10/68 (14%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
+L + ++ D++ NG I + +++ L K L + +++ + ++
Sbjct: 42 DLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKRLIREVSSGSEET 100
Query: 473 VDFSEFVA 480
+S+F+
Sbjct: 101 FSYSDFLR 108
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 3e-09
Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 15/104 (14%)
Query: 460 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 519
+ + ++ +D ++ +LE + + +FD++ +G I
Sbjct: 19 QQEERLEGINKQFLDDPKYSNDEDLPSKLEAF---------KVKYMEFDLNGNGDIDIMS 69
Query: 520 LR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 557
L+ + G+ + + L+ E + S S+F R++
Sbjct: 70 LKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK 113
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 57.9 bits (141), Expect = 5e-11
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS----IDPLLEEADIDKD 542
D E+ + AF+ FD + DG I +E + G + ++ ++EAD D +
Sbjct: 3 RQDDEE-EIL--RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGN 59
Query: 543 GRISLSEFRRLLR 555
G I + EF L++
Sbjct: 60 GVIDIPEFMDLIK 72
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 7e-11
Identities = 14/68 (20%), Positives = 33/68 (48%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
+ ++ ++ F D + +G I +E + + K L ++ V E ++ D + +G+
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61
Query: 473 VDFSEFVA 480
+D EF+
Sbjct: 62 IDIPEFMD 69
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 1e-10
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVD 474
EL + +++ A + D +S EE++Q + + P LK R L ++ Q +D N DG V
Sbjct: 7 AELKSIFEKYAAKEGDP-NQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVS 65
Query: 475 FSEFVA 480
F EF
Sbjct: 66 FEEFQV 71
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 2e-10
Identities = 10/68 (14%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
E+L ++++ D++ G I L +++ + K L + +++ +
Sbjct: 44 NLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEK-LGVPKTHLEMKKMISEVTGGVSDT 102
Query: 473 VDFSEFVA 480
+ + +FV
Sbjct: 103 ISYRDFVN 110
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 1e-07
Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 488 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDK 541
+E + + + + +FD++ +G I L+ M G+ + + ++ E
Sbjct: 40 SDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGV 99
Query: 542 DGRISLSEF 550
IS +F
Sbjct: 100 SDTISYRDF 108
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 3e-10
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 503 AFEKFDIDRDGFITPEELR--MHT---GLKGSIDPLLEEADIDKDGRISLSEFRRLLRTA 557
F++FD + DG I+ EL + T + ++ E D D DG I +EF
Sbjct: 8 IFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67
Query: 558 SISSRNV 564
++V
Sbjct: 68 PGLMKDV 74
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 8e-09
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 479
D+ F D + +G ISL E+ AL L + V ++ ID + DG +DF+EF+
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRT-LGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 61
Query: 480 A 480
+
Sbjct: 62 S 62
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 5e-09
Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 75/260 (28%)
Query: 92 KDFDRRYTIGK--LLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKR-- 145
+FD R +G G FG Y K N VAVKK+ ++ I E++K+
Sbjct: 25 NNFDERPISVGGNKMGEGGFGVVY----KGYVNNTTVAVKKL---AAMVDITTEELKQQF 77
Query: 146 --EVKILQALAGHENVVKFYN-AFEDDNY--VYIAMELCEGGELLDRILAKMISTTLTSA 200
E+K++ HEN+V+ + + D+ VY G LLDR+ + L+
Sbjct: 78 DQEIKVMAKCQ-HENLVELLGFSSDGDDLCLVY---VYMPNGSLLDRLSCLDGTPPLS-- 131
Query: 201 WFLAIRKDSRYTEKDAAVVVRQMLRVAA-----------ECHLHGLVHRDMKPENFLFKS 249
W R ++A H +HRD+K N L
Sbjct: 132 W------HMR-------------CKIAQGAANGINFLHENHH----IHRDIKSANILL-- 166
Query: 250 AKEDSSLKA--TDFGLSDFIKPGKKFQD------IVGSAYYVAPEVLKRKSGPESDVWSI 301
D + A +DFGL+ + +KF IVG+ Y+APE L+ + P+SD++S
Sbjct: 167 ---DEAFTAKISDFGLA---RASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSF 220
Query: 302 GVITYILLCGRRPFWDKTED 321
GV+ ++ G D+ +
Sbjct: 221 GVVLLEIITGLPAV-DEHRE 239
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 2e-08
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVD 474
EE+ + F A + IS EE++ + P LK L E+++ +D N DG V
Sbjct: 5 EEIKGAFEVFAAKE-GDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVS 63
Query: 475 FSEFVA 480
F EF+
Sbjct: 64 FEEFLV 69
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 6e-08
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 502 AAFEKFDIDRD--GFITPEELRM--------HTGLKGSIDPLLEEADIDKDGRISLSEFR 551
AFE F I+ EEL++ ++D ++EE D + DG +S EF
Sbjct: 9 GAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFL 68
Query: 552 RLLRTAS 558
+++ S
Sbjct: 69 VMMKKIS 75
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 4e-08
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
+ DE+ +QF I D NG I ++ K KL + I + D + DG
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK---SKLPILELSHIWELSDFDKDG 58
Query: 472 LVDFSEFVAA 481
+ EF AA
Sbjct: 59 ALTLDEFCAA 68
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 1e-06
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 499 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 550
F+ D +GFI + + L + + E +D DKDG ++L EF
Sbjct: 10 YYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEF 65
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 4e-08
Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
+ E A + F D D +G +S E+R+ K L + + I D G
Sbjct: 3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK---TGLPSTLLAHIWSLCDTKDCG 59
Query: 472 LVDFSEFVAA 481
+ +F A
Sbjct: 60 KLSKDQFALA 69
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 2e-07
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 499 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 550
+ F K D D DGF++ E+R + TGL + + D G++S +F
Sbjct: 11 KYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQF 66
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 53.0 bits (126), Expect = 1e-07
Identities = 30/197 (15%), Positives = 55/197 (27%), Gaps = 64/197 (32%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPIAVEDVKREVKILQ 151
+ + +G G FG + VA+K I + E++ E+ I +
Sbjct: 21 KLQRCEKIGEGVFGEVFQTIAD--HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK 78
Query: 152 ALAG--------HENVVKFYNAF------------------------------EDDNYVY 173
L+ E + + D+ ++
Sbjct: 79 ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF 138
Query: 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH-L 232
I +E GG L+++ K+ S A ++ Q+ A
Sbjct: 139 IVLEFEFGGIDLEQMRTKLSS------------------LATAKSILHQLTASLAVAEAS 180
Query: 233 HGLVHRDMKPENFLFKS 249
HRD+ N L K
Sbjct: 181 LRFEHRDLHWGNVLLKK 197
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 2e-07
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
+ +E+ +QF ++ D + IS + K KL + I + D + DG
Sbjct: 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK---SKLSIPELSYIWELSDADCDG 71
Query: 472 LVDFSEFVAA 481
+ EF AA
Sbjct: 72 ALTLPEFCAA 81
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 1e-06
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 499 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 550
F D FI+ + + L + + E +D D DG ++L EF
Sbjct: 23 YYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEF 78
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 2e-07
Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 18/71 (25%)
Query: 503 AFEKFDIDRDGFITPEELR---MHTG---------------LKGSIDPLLEEADIDKDGR 544
F+ D D + + EL H L ID +L + D + DG
Sbjct: 73 YFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGY 132
Query: 545 ISLSEFRRLLR 555
I +EF + L+
Sbjct: 133 IDYAEFAKSLQ 143
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 5e-05
Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Query: 406 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL------ 459
+ + + +EL F D D N + E+ A+ + E L
Sbjct: 57 INKPEAEMSPQEL--QLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDEL 114
Query: 460 -----EILQAIDCNTDGLVDFSEFVAA 481
+L+ D N DG +D++EF +
Sbjct: 115 INIIDGVLRDDDKNNDGYIDYAEFAKS 141
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 3e-07
Identities = 59/252 (23%), Positives = 96/252 (38%), Gaps = 79/252 (31%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
+FD ++ L+GHG FG Y K +G +VA+K+ +E+ + E++
Sbjct: 39 NNFDHKF----LIGHGVFGKVY----KGVLRDGAKVALKRRTPESSQ---GIEEFETEIE 87
Query: 149 ILQALAGHENVVKFYNAFEDDNY---VYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
L H ++V ++ N +Y + E G L + + T S W
Sbjct: 88 TLSFCR-HPHLVSLIGFCDERNEMILIY---KYMENGNLKRHLYGSDLPTMSMS-W---- 138
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAE-----CHLH--GLVHRDMKPENFLFKSAKEDSSLKA 258
Q L + +LH ++HRD+K N L D +
Sbjct: 139 ---------------EQRLEICIGAARGLHYLHTRAIIHRDVKSINILL-----DENFVP 178
Query: 259 --TDFGLSDFIKPGKKFQD---------IVGSAYYVAPEVLKR-----KSGPESDVWSIG 302
TDFG+S KK + + G+ Y+ PE + KS DV+S G
Sbjct: 179 KITDFGIS------KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKS----DVYSFG 228
Query: 303 VITYILLCGRRP 314
V+ + +LC R
Sbjct: 229 VVLFEVLCARSA 240
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 | Back alignment and structure |
|---|
Score = 52.6 bits (125), Expect = 3e-07
Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
Query: 397 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
+ ++ L A + E++ + R F+ D K G + E+ R L + + + E+
Sbjct: 703 TINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLI-SMGYNMGEA 761
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
I+ +D N G+V F F+ + + D+ + A+F+ D++ +IT
Sbjct: 762 EFARIMSIVDPNRMGVVTFQAFID--FMSRETADTDTAD---QVMASFKILAGDKN-YIT 815
Query: 517 PEELRMH 523
+ELR
Sbjct: 816 VDELRRE 822
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 3e-07
Identities = 13/66 (19%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 416 EELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
+ L + D + ++ ++ +++++ L + P +++ + +D NTDG V
Sbjct: 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAV 66
Query: 474 DFSEFV 479
+F EF+
Sbjct: 67 NFQEFL 72
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 4e-07
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
+ R F++ D +G ++ + R L + L ++++ I D + DG
Sbjct: 7 AVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ---SSLPQAQLASIWNLSDIDQDG 63
Query: 472 LVDFSEFVAA 481
+ EF+ A
Sbjct: 64 KLTAEEFILA 73
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 1e-06
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 499 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 550
+ + F D G +T + R M + L + + + +DID+DG+++ EF
Sbjct: 15 KYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEF 70
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 5e-07
Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 42/179 (23%)
Query: 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 477
+ + F D+DK+GS+S EMR A+ + +KL ++ +++ A + + ++DF
Sbjct: 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAI-EAAGFKLP-CQLHQVIVARFADDELIIDFDN 663
Query: 478 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT-------------------PE 518
FV + + L + F++ D + G I
Sbjct: 664 FVRCLVRLEILFK------------IFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEH 711
Query: 519 ELRMHTGLKGSIDPLLEEADI---------DKDGRISLSEFRRLLRTASISSRNVPPSP 568
H EE D +S +E +L ++
Sbjct: 712 HHHHHMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDG 770
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 1e-05
Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 21/112 (18%)
Query: 412 TLDDEELADL-------RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 464
L EE L + + + D++G+I E+ A + + L + ++
Sbjct: 790 KLGFEEFKYLWNNIKKWQGIYKRFETDRSGTIGSNELPGAF-EAAGFHLN-QHIYSMIIR 847
Query: 465 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+ G +DF F++ + + + AF D + G I
Sbjct: 848 RYSDETGNMDFDNFISCLVRLDAMFR------------AFRSLDKNGTGQIQ 887
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 3e-04
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 22/117 (18%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR--------VLEILQAI 465
+ EE R F + + +S E+ L K + + + + ++ +
Sbjct: 726 ESEEERQFRKLFVQLA-GDDMEVSATELMNILNKVV-TRHPDLKTDGFGIDTCRSMVAVM 783
Query: 466 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM 522
D +T G + F EF L ++ +KW Q +++F+ DR G I EL
Sbjct: 784 DSDTTGKLGFEEF--KYLW------NNIKKW----QGIYKRFETDRSGTIGSNELPG 828
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 2e-06
Identities = 53/232 (22%), Positives = 89/232 (38%), Gaps = 52/232 (22%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG Y A+G VAVK++++ + + EV+++ ++A H N+++
Sbjct: 37 ILGRGGFGKVYKGR-LADGTLVAVKRLKEER--TQGGELQFQTEVEMI-SMAVHRNLLRL 92
Query: 163 YNAFEDDNY---VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
VY G + + + S W R
Sbjct: 93 RGFCMTPTERLLVY---PYMANGSVASCLRERPESQPPLD-W------PKR--------- 133
Query: 220 VRQMLRVAA-----------ECHLHGLVHRDMKPENFLFKSAKEDSSLKA--TDFGLSDF 266
R+A C ++HRD+K N L D +A DFGL+
Sbjct: 134 ----QRIALGSARGLAYLHDHCDPK-IIHRDVKAANILL-----DEEFEAVVGDFGLAKL 183
Query: 267 IKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPF 315
+ + G+ ++APE L KS ++DV+ GV+ L+ G+R F
Sbjct: 184 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-06
Identities = 10/54 (18%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 427 AIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVDFSEFV 479
+ ++S +E+++ + K+L + + ++++++D N+D +DF E+
Sbjct: 20 SGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYS 73
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 6e-06
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 424 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 479
++ + IS R+ L K+L L ++ +++Q +D N DG + F E+
Sbjct: 19 KYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYW 78
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 1e-05
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLV 473
+ + F DK G ++ E++R + K+ P L+ + V +I++ +D DG V
Sbjct: 8 METMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKV 66
Query: 474 DFSEFV 479
F F
Sbjct: 67 GFQSFF 72
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 46.7 bits (110), Expect = 2e-05
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 477
+ + + IDVD++G+++ EMR+AL ++ +KL ++ +++ A + + ++DF
Sbjct: 604 IQKYQKIYREIDVDRSGTMNSYEMRKAL-EEAGFKLP-CQLHQVIVARFADDELIIDFDN 661
Query: 478 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
FV + + L + F++ D + G I
Sbjct: 662 FVRCLVRLEILFK------------IFKQLDPENTGTIQ 688
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A Length = 106 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-05
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 424 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVDFSEFV 479
F + K S+S+ E ++ + + LP LK+ L E ++++D N D + F+E+
Sbjct: 30 TFARQEGRK-DSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYW 85
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-05
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
L+ T + ++ G + + L K L + + +I D +
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK---SGLPDLILGKIWDLADTD 57
Query: 469 TDGLVDFSEFVAA 481
G++ EF A
Sbjct: 58 GKGVLSKQEFFVA 70
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 3e-05
Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 501 QAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEFRRLLRT 556
+ + + + G + + +GL + + + AD D G +S EF LR
Sbjct: 14 EKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73
Query: 557 ASISSRNVPPSPS 569
+ + + S S
Sbjct: 74 VACAQNGLEVSLS 86
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-05
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 418 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 471
L + F + ++ E+++ L ++LP L + +++ +D N D
Sbjct: 12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDN 71
Query: 472 LVDFSEFV 479
VDF E+
Sbjct: 72 EVDFQEYC 79
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 2e-05
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 418 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 471
L + F + ++ E+++ L ++LP L + +++ +D N D
Sbjct: 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDN 68
Query: 472 LVDFSEFV 479
VDF E+
Sbjct: 69 EVDFQEYC 76
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 2e-05
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 24/87 (27%)
Query: 486 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL-----RMHTGLKGSIDP-------- 532
+L+ D +++ ++ F DI+ DG + +EL + + +
Sbjct: 10 EELDGLDPNRFNPKT--FFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREME 67
Query: 533 ---------LLEEADIDKDGRISLSEF 550
+++ D ++D ++L EF
Sbjct: 68 EERLRMREHVMKNVDTNQDRLVTLEEF 94
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 3e-05
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 16/85 (18%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL------------PWKLKESR--- 457
LD + + F D++ +G + +E+ K+L +++E R
Sbjct: 15 LDPNRF-NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRM 73
Query: 458 VLEILQAIDCNTDGLVDFSEFVAAT 482
+++ +D N D LV EF+A+T
Sbjct: 74 REHVMKNVDTNQDRLVTLEEFLAST 98
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 4e-05
Identities = 18/144 (12%), Positives = 38/144 (26%), Gaps = 28/144 (19%)
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR-----VLEILQAIDCNTDGLVDF 475
+ V + I +++ L ++L ++ ++ +G +D
Sbjct: 7 HHHHSSGL-VPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQ 65
Query: 476 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDP--- 532
EF + Q F+K G + +L +
Sbjct: 66 EEFARLW--------KRLVHY----QHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFI 112
Query: 533 ------LLEEADIDKDGRISLSEF 550
L+ D GR+S
Sbjct: 113 SRELLHLVTLRYSDSVGRVSFPSL 136
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 2e-04
Identities = 12/103 (11%), Positives = 29/103 (28%), Gaps = 17/103 (16%)
Query: 420 DLRDQFDAIDVDKNGSISLEEMRQALA---KDLPWKLKESRVLEILQAIDCNTDGLVDFS 476
+ F + G + ++ +A+ + +L ++ ++ G V F
Sbjct: 77 HYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISR-ELLHLVTLRYSDSVGRVSFP 134
Query: 477 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 519
V + + + + F D G E
Sbjct: 135 SLVCFLMRLEAMAK------------TFRNLSKDGKGLYLTEM 165
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 4e-05
Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 411 STLDDEELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQA 464
+ ++ L + F + ++ E+++ L ++LP L + +++
Sbjct: 14 ACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSN 73
Query: 465 IDCNTDGLVDFSEFV 479
+D N D VDF E+
Sbjct: 74 LDSNRDNEVDFQEYC 88
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 7e-05
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
+ EE A QF ++ +G I+ ++ R + L + + +I D N DG
Sbjct: 26 AITVEERAKHDQQFHSLK-PISGFITGDQARNFFFQ---SGLPQPVLAQIWALADMNNDG 81
Query: 472 LVDFSEFVAA 481
+D EF A
Sbjct: 82 RMDQVEFSIA 91
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 38.7 bits (90), Expect = 8e-04
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 499 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 550
+ F GFIT ++ R +GL + + + AD++ DGR+ EF
Sbjct: 34 KHDQQFHSLK-PISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEF 88
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Length = 95 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 8e-05
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 427 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 479
++ ++S E++Q L K+L +K + + EI Q +D N D VDF EF+
Sbjct: 22 SVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFI 78
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Length = 95 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 1e-04
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 427 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 479
+ +++ E++ + K+LP L+ + V ++L+ +D N D VDFSEF+
Sbjct: 19 SGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFI 75
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 1e-04
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 424 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 479
Q+ + DK + E+++ + +L L+E + V ++++ +D N DG DF EF+
Sbjct: 17 QYSGREGDK-HKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFM 75
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 1e-04
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 418 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLK----ESRVLEILQAIDCNTDG 471
+ L + F + +S +E++ L +L L V +I++ +D N DG
Sbjct: 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDG 67
Query: 472 LVDFSEFV 479
VDF EFV
Sbjct: 68 EVDFQEFV 75
|
| >1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Length = 99 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 2e-04
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 418 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 471
+ L F A N IS E + +L + + + +++ +D ++DG
Sbjct: 12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDG 71
Query: 472 LVDFSEFV 479
+DF EF+
Sbjct: 72 QLDFQEFL 79
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 2e-04
Identities = 13/105 (12%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 413 LDDEELAD--LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 470
+D + + D +K+ ++ +E++ K+L ++ + +I + D +
Sbjct: 3 MDQRQKLQHWIHSCLRKADKNKDNKMNFKELKD-FLKELNIQVDDGYARKIFRECDHSQT 61
Query: 471 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 515
++ E L +E +AA + + +
Sbjct: 62 DSLEDEEIETF---YKML-TQRAEIDRAFEEAAGSAETLSVERLV 102
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 2e-04
Identities = 25/175 (14%), Positives = 61/175 (34%), Gaps = 33/175 (18%)
Query: 406 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR--VLEILQ 463
L+ + + + ++ A + +F+ + VD G + + + + S +++
Sbjct: 15 LQFVTAKVGNDGWAAVEKRFNQLQVD--GVLLRSRFGKCI------GMDGSDEFAVQMFD 66
Query: 464 AID---CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL 520
++ ++ E QL + + R + F+ D + DG +T EE+
Sbjct: 67 SLARKRGIVKQVLTKDELKDF---YEQLTDQGFDN---RLRTFFDMVDKNADGRLTAEEV 120
Query: 521 R--------------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISS 561
+ + ++EE D G I + + LL + +
Sbjct: 121 KEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSPSEA 175
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 431 DKNGSISLEEMRQALAKDLPWKLK--ESRVLEILQAIDCNTDGLVDFSEFV 479
++S +E+++ + K+L K ++ + +++ +D N D V+F E+V
Sbjct: 24 GDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYV 74
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Length = 101 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 424 QFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDGLVDFSEFV 479
++ DK + E+++ L K+L + +E + + +D N D VDF E+V
Sbjct: 18 EYAGRCGDKY-KLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYV 76
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
+ E+ A FD++ NG +S ++++ L KL + + + D + DG
Sbjct: 8 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN---SKLPVDILGRVWELSDIDHDG 63
Query: 472 LVDFSEFVAATLHVHQ 487
++D EF A V+
Sbjct: 64 MLDRDEFAVAMFLVYC 79
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 38.6 bits (90), Expect = 7e-04
Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 499 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 550
+ A F+ +GF++ ++++ +++ L + + E +DID DG + EF
Sbjct: 16 KYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEF 70
|
| >1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A* Length = 229 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 3e-04
Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 5/69 (7%)
Query: 489 EEHDSEKWHLRSQAAFEKFDIDR-DGFITPEELR----MHTGLKGSIDPLLEEADIDKDG 543
E + + F + D DG+++ EL ++ E D+D D
Sbjct: 146 PEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDK 205
Query: 544 RISLSEFRR 552
I+L E+
Sbjct: 206 YIALDEWAG 214
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} Length = 99 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 3e-04
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 418 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 471
+ L F + +S E+++ L +L L + V +I+ +D N D
Sbjct: 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDN 68
Query: 472 LVDFSEFV 479
VDF+EFV
Sbjct: 69 EVDFNEFV 76
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* Length = 113 | Back alignment and structure |
|---|
Score = 38.7 bits (90), Expect = 7e-04
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 427 AIDVDKNGSISLEEMRQALAKDLPWKLK-----ESRVLEILQAIDCNTDGLVDFSEFV 479
++ + +++ E ++ + KDL LK E + I++ +D N D + F EF+
Sbjct: 22 SVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 577 | |||
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 100.0 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.94 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.93 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.92 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.91 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.91 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 99.9 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.9 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.9 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.89 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.89 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.88 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.88 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.88 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 99.88 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.87 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.87 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.87 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.87 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.87 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.86 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.86 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.86 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.86 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.86 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.86 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.86 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.85 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.85 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.85 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.85 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.85 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.85 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.85 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.85 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.85 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 99.84 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.84 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 99.84 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.84 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.83 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.83 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 99.82 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 99.82 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.82 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.81 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.81 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.81 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.81 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 99.81 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.81 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.81 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 99.81 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.8 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.8 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.8 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.79 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.78 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 99.78 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.77 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.77 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.77 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.77 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 99.76 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 99.76 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.76 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.76 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.76 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.76 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.75 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.75 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 99.75 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.75 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.75 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.75 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.74 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.74 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.73 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.73 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.73 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.73 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.71 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.71 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.71 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.7 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.68 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.67 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.67 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.63 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.62 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 99.62 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 99.61 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.61 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.61 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.6 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.59 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.59 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.58 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.56 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.56 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.56 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 99.55 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.54 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.53 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.52 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.51 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.48 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.46 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 99.46 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.44 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.43 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.41 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.38 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.38 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.38 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.37 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.37 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.37 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.37 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.35 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.33 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.32 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.32 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 99.31 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.31 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.28 | |
| 2kld_A | 123 | Polycystin-2; PC2, PKD2, calcium binding domain, E | 99.28 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.27 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.27 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.26 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.25 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.25 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.25 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.24 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.24 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.23 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.23 | |
| 1eg3_A | 261 | Dystrophin; EF-hand like domain, WW domain, struct | 99.22 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 99.21 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.21 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.21 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.2 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.19 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.18 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.18 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 99.17 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 99.17 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.17 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.16 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.16 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 99.16 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 99.14 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.14 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 99.13 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.13 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 99.13 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.12 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.12 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.12 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.12 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.11 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 99.11 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 99.11 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.1 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.1 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.1 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 99.1 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.1 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 99.1 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.1 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.09 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.09 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 99.08 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.08 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 99.08 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 99.08 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 99.08 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.08 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 99.07 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.07 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.07 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 99.07 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.07 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.07 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.07 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 99.07 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.06 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.06 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.06 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 99.05 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.05 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.05 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 99.05 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.05 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 99.05 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 99.05 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.05 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.05 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.04 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.04 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.04 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.04 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 99.04 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.04 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.03 | |
| 2wcb_A | 95 | Protein S100-A12; calcium signalling, HOST-parasit | 99.03 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.03 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 99.03 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.03 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 99.03 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.02 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.02 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.02 | |
| 2d58_A | 107 | Allograft inflammatory factor 1; EF-hand, metal bi | 99.02 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 99.02 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.01 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 99.01 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.01 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.01 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.0 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 99.0 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.0 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 99.0 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 99.0 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.0 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 98.99 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 98.99 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 98.99 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 98.99 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 98.99 | |
| 1yx7_A | 83 | Calsensin, LAN3-6 antigen; calcium-binding protein | 98.98 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 98.98 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 98.98 | |
| 1xk4_A | 93 | Calgranulin A; S100 family, heterotetramer, metal | 98.98 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 98.98 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 98.98 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 98.97 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 98.97 | |
| 2jq6_A | 139 | EH domain-containing protein 1; metal binding prot | 98.96 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 98.96 | |
| 1k2h_A | 93 | S100A1, S-100 protein, alpha chain; non-covalent h | 98.96 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 98.95 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 98.95 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 98.95 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 98.95 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 98.95 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 98.95 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 98.93 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 98.93 |
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-78 Score=646.96 Aligned_cols=442 Identities=35% Similarity=0.598 Sum_probs=371.6
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
..+.++|++++.||+|+||.||+|.++.+|+.||||++.+.... ......+.+|+.+++++ +||||+++++++.+.+.
T Consensus 18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~ 95 (486)
T 3mwu_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKL-DHPNIMKLFEILEDSSS 95 (486)
T ss_dssp CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCE
Confidence 35677999999999999999999999999999999998654321 12456789999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||++|+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 96 ~~lv~e~~~~~~L~~~~~~~-----------------~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~ 158 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEIIKR-----------------KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE 158 (486)
T ss_dssp EEEEECCCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSS
T ss_pred EEEEEEcCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC
Confidence 99999999999999877543 6789999999999999999999999999999999999998655
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
.++.+||+|||+|............+||+.|+|||++.+.++.++|||||||++|+|++|.+||.+.+..+++..+..+.
T Consensus 159 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~ 238 (486)
T 3mwu_A 159 KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK 238 (486)
T ss_dssp TTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred CCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence 67789999999998877666666778999999999999989999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCC----cccHHHHHhhHHhhhhhhhhHHHHH
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI----PIDISVLNNMRQFVKYSRLKQFALR 407 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~----~~~~~~~~~lk~~~~~s~l~~~~l~ 407 (577)
..+..+.|..+|+++.+||.+||..||.+|||+.++|+||||+........ +.....+.++++|....++++..+.
T Consensus 239 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 318 (486)
T 3mwu_A 239 YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALL 318 (486)
T ss_dssp CCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877777788899999999999999999999999999999999987654322 2223457788888888889988888
Q ss_pred hhcccc-chHHHhhhccccccccCCCCCCCCHHHHHHHHHh---hCCCCcc----------HHHHHHHHHhhcCCCCcce
Q 008127 408 ALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK---DLPWKLK----------ESRVLEILQAIDCNTDGLV 473 (577)
Q Consensus 408 ~~~~~~-~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~---~~~~~~~----------~~~~~~~~~~~D~d~dg~i 473 (577)
.+...+ +++++++++++|+.+|.|+||.|+.+||..++.. .+|..++ +.+++.+|+.+|.|+||.|
T Consensus 319 ~ia~~l~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I 398 (486)
T 3mwu_A 319 YMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSI 398 (486)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSB
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcC
Confidence 887666 8899999999999999999999999999766543 3466655 8899999999999999999
Q ss_pred ehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccH
Q 008127 474 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISL 547 (577)
Q Consensus 474 ~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~ 547 (577)
+|+||+.++....... . ...++.+|+.||+|+||+|+.+||+.++...| +++++|+.+|.|+||.|+|
T Consensus 399 ~~~Ef~~~~~~~~~~~---~---~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~ 472 (486)
T 3mwu_A 399 EYSEFIASAIDRTILL---S---RERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDF 472 (486)
T ss_dssp CHHHHHHHHSCTTTTC---C---HHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCH
T ss_pred cHHHHHHHHHhhhccc---h---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeH
Confidence 9999998765432211 1 23678899999999999999999999998776 5899999999999999999
Q ss_pred HHHHHHHhhcc
Q 008127 548 SEFRRLLRTAS 558 (577)
Q Consensus 548 ~EF~~~l~~~~ 558 (577)
+||+.+|....
T Consensus 473 ~EF~~~~~~~~ 483 (486)
T 3mwu_A 473 NEFVEMLQNFV 483 (486)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999998753
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-77 Score=644.93 Aligned_cols=442 Identities=35% Similarity=0.584 Sum_probs=382.0
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch----------hhHHHHHHHHHHHHHhcCCCCeeE
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP----------IAVEDVKREVKILQALAGHENVVK 161 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~----------~~~~~~~~E~~~l~~l~~hpniv~ 161 (577)
..+.++|++++.||+|+||.||+|.++.+++.||||++.+...... ...+.+.+|+.+++++ +||||++
T Consensus 32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~ 110 (504)
T 3q5i_A 32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIK 110 (504)
T ss_dssp SCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBCC
T ss_pred CCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCCe
Confidence 4467899999999999999999999999999999999976543211 2456789999999999 5999999
Q ss_pred EEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCC
Q 008127 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 241 (577)
Q Consensus 162 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlK 241 (577)
++++|.+.+.+|+|||||+||+|.+.+... ..+++..++.++.||+.||.|||++||+|||||
T Consensus 111 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlk 173 (504)
T 3q5i_A 111 LFDVFEDKKYFYLVTEFYEGGELFEQIINR-----------------HKFDECDAANIMKQILSGICYLHKHNIVHRDIK 173 (504)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHHHH-----------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred EEEEEEcCCEEEEEEecCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCc
Confidence 999999999999999999999999877543 679999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChh
Q 008127 242 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED 321 (577)
Q Consensus 242 p~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 321 (577)
|+|||++..+....+||+|||+|............+||+.|+|||++.+.++.++|||||||++|+|++|..||.+.+..
T Consensus 174 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 253 (504)
T 3q5i_A 174 PENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ 253 (504)
T ss_dssp GGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred HHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999986444457999999999887766666778899999999999988899999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCC---cccHHHHHhhHHhhhh
Q 008127 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI---PIDISVLNNMRQFVKY 398 (577)
Q Consensus 322 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~---~~~~~~~~~lk~~~~~ 398 (577)
+++..+..+...++...|+.+|+++.+||.+||..||.+|||+.++|+||||+........ ......+.++++|...
T Consensus 254 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (504)
T 3q5i_A 254 DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGS 333 (504)
T ss_dssp HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHH
Confidence 9999999988777766678899999999999999999999999999999999987654321 1223457788888888
Q ss_pred hhhhHHHHHhhcccc-chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhC--------CCCccHHHHHHHHHhhcCCC
Q 008127 399 SRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL--------PWKLKESRVLEILQAIDCNT 469 (577)
Q Consensus 399 s~l~~~~l~~~~~~~-~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~--------~~~~~~~~~~~~~~~~D~d~ 469 (577)
+++++..+..+...+ +++++++++++|+.+|.|+||+|+.+||..+|.. + |..+++.+++.+|+.+|.|+
T Consensus 334 ~kl~~a~l~~i~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~d~ 412 (504)
T 3q5i_A 334 QKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNV-LRNFKNELGELKNVEEEVDNILKEVDFDK 412 (504)
T ss_dssp SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HHHHC--CCSCCCHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhhccCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHH-hhhcccccccccccHHHHHHHHHHhCCCC
Confidence 899888777777655 8899999999999999999999999999999854 4 56788999999999999999
Q ss_pred CcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcc
Q 008127 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRI 545 (577)
Q Consensus 470 dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i 545 (577)
||.|+|+||+.++...... .. ...++.+|+.||+|+||+|+.+||+.++...+ +++++|+.+|.|+||.|
T Consensus 413 dG~I~~~EF~~~~~~~~~~---~~---~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I 486 (504)
T 3q5i_A 413 NGYIEYSEFISVCMDKQIL---FS---EERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMI 486 (504)
T ss_dssp SSSEEHHHHHHHHSCHHHH---TC---HHHHHHHHHHHCTTCCSEECHHHHHHHTTCSCCCHHHHHHHHHTTCSSCSSSE
T ss_pred CCcEeHHHHHHHHHhhhcc---cC---HHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCCCCHHHHHHHHHHhCCCCCCcE
Confidence 9999999999877543211 11 23678899999999999999999999987644 59999999999999999
Q ss_pred cHHHHHHHHhhcc
Q 008127 546 SLSEFRRLLRTAS 558 (577)
Q Consensus 546 ~~~EF~~~l~~~~ 558 (577)
+|+||+.+|....
T Consensus 487 ~~~EF~~~~~~~~ 499 (504)
T 3q5i_A 487 DFDEFVSMMHKIC 499 (504)
T ss_dssp EHHHHHHHHHHHC
T ss_pred eHHHHHHHHHHhc
Confidence 9999999998754
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-77 Score=644.32 Aligned_cols=441 Identities=36% Similarity=0.606 Sum_probs=385.6
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.++|++.+.||+|+||.||+|+++.+|+.||||++.+...........+.+|+.+++++ +||||+++++++...+.+
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~ 101 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYF 101 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEE
Confidence 4667899999999999999999999999999999999766544344577899999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||||.+|+|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++....
T Consensus 102 ~lv~e~~~~~~L~~~~~-----------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~ 164 (484)
T 3nyv_A 102 YLVGEVYTGGELFDEII-----------------SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSK 164 (484)
T ss_dssp EEEECCCCSCBHHHHHH-----------------TCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSST
T ss_pred EEEEecCCCCCHHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCC
Confidence 99999999999988764 2367999999999999999999999999999999999999975556
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
++.+||+|||+|............+||+.|+|||++.+.++.++|||||||++|+|++|.+||.+.+..+.+..+..+..
T Consensus 165 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~ 244 (484)
T 3nyv_A 165 DANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKY 244 (484)
T ss_dssp TCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred CCcEEEEeeeeeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC
Confidence 78999999999988776666667789999999999999899999999999999999999999999999999999999888
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC---CCCcccHHHHHhhHHhhhhhhhhHHHHHhh
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA---SEIPIDISVLNNMRQFVKYSRLKQFALRAL 409 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~---~~~~~~~~~~~~lk~~~~~s~l~~~~l~~~ 409 (577)
.+..+.|+.+|+++.+||.+||..||.+|||+.++|+||||+..... ...+.....+.++++|...+++++..+..+
T Consensus 245 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i 324 (484)
T 3nyv_A 245 TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 324 (484)
T ss_dssp CCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 87777788899999999999999999999999999999999976542 234445567888999999999999888888
Q ss_pred cccc-chHHHhhhccccccccCCCCCCCCHHHHHHHHH---hhCCCCcc-------HHHHHHHHHhhcCCCCcceehhhH
Q 008127 410 ASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALA---KDLPWKLK-------ESRVLEILQAIDCNTDGLVDFSEF 478 (577)
Q Consensus 410 ~~~~-~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~---~~~~~~~~-------~~~~~~~~~~~D~d~dg~i~f~EF 478 (577)
...+ +++++++++++|..+|.|+||.|+.+||..++. +.+|..++ +.+++.+|+.+|.|+||.|+|+||
T Consensus 325 ~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef 404 (484)
T 3nyv_A 325 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEF 404 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHH
T ss_pred HhccCcHHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHH
Confidence 7665 788999999999999999999999999955543 34677777 889999999999999999999999
Q ss_pred HHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008127 479 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
+.++...... .....++.+|+.||+|+||+|+.+||+.++...+ +++++|+.+|.|+||.|+|+||+.+|
T Consensus 405 ~~~~~~~~~~------~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 478 (484)
T 3nyv_A 405 VTVAMDRKTL------LSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478 (484)
T ss_dssp HHHHHHHHHH------HHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHH
T ss_pred HHHHHhcccc------CcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHH
Confidence 9876543211 1124688899999999999999999999987433 58999999999999999999999999
Q ss_pred hhc
Q 008127 555 RTA 557 (577)
Q Consensus 555 ~~~ 557 (577)
...
T Consensus 479 ~~~ 481 (484)
T 3nyv_A 479 LKL 481 (484)
T ss_dssp HHT
T ss_pred Hhh
Confidence 864
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-78 Score=645.83 Aligned_cols=442 Identities=37% Similarity=0.619 Sum_probs=381.0
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
..+.++|++++.||+|+||.||+|+++.++..||||++.+.... ......+.+|+.+++.+ +||||++++++|...+.
T Consensus 33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~ 110 (494)
T 3lij_A 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRN 110 (494)
T ss_dssp CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSSE
T ss_pred CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCE
Confidence 34667899999999999999999999999999999998765432 22356788999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||++|+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~-----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~ 173 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHR-----------------MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE 173 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS
T ss_pred EEEEEecCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCC
Confidence 99999999999999877544 6789999999999999999999999999999999999998655
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
.++.+||+|||+|............+||+.|+|||++.+.++.++|||||||++|+|++|.+||.+.+..+++..+..+.
T Consensus 174 ~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~ 253 (494)
T 3lij_A 174 KDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGK 253 (494)
T ss_dssp TTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred CCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence 56789999999998877666666778999999999998888999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC----CCCcccHHHHHhhHHhhhhhhhhHHHHH
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA----SEIPIDISVLNNMRQFVKYSRLKQFALR 407 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~----~~~~~~~~~~~~lk~~~~~s~l~~~~l~ 407 (577)
..+..+.|+.+|+.+.+||.+||+.||.+|||+.++|+||||+..... ...+.....+.++++|....++++..+.
T Consensus 254 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~ 333 (494)
T 3lij_A 254 YTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALL 333 (494)
T ss_dssp CCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHH
T ss_pred CCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHH
Confidence 888877888999999999999999999999999999999999875322 2334444678889999999999998888
Q ss_pred hhcccc-chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCC--------CCccHHHHHHHHHhhcCCCCcceehhhH
Q 008127 408 ALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP--------WKLKESRVLEILQAIDCNTDGLVDFSEF 478 (577)
Q Consensus 408 ~~~~~~-~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~--------~~~~~~~~~~~~~~~D~d~dg~i~f~EF 478 (577)
.+...+ +++++++++++|+.+|.|+||.|+.+||..+|.. ++ ..+++.+++.+|+.+|.|+||.|+|+||
T Consensus 334 ~ia~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF 412 (494)
T 3lij_A 334 YMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSK-LSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEF 412 (494)
T ss_dssp HHHHHSCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHH-HHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHH
T ss_pred HHHHhcccHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHH-hcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 887666 8889999999999999999999999999999855 43 3566899999999999999999999999
Q ss_pred HHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008127 479 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
+.++....... . ...++.+|+.||+|+||+|+.+||+.++.... +++++|+.+|.|+||.|+|+||+.+|
T Consensus 413 ~~~~~~~~~~~---~---~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~ 486 (494)
T 3lij_A 413 VTVAMDRKSLL---S---KDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 486 (494)
T ss_dssp HHHHSCHHHHT---C---HHHHHHHHHHHCTTCSSEECHHHHHHHC-CCSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHH
T ss_pred HHHHHhhhccc---c---HHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 98765432111 1 23678899999999999999999999997532 59999999999999999999999999
Q ss_pred hhccc
Q 008127 555 RTASI 559 (577)
Q Consensus 555 ~~~~~ 559 (577)
++...
T Consensus 487 ~~~~~ 491 (494)
T 3lij_A 487 QKLCS 491 (494)
T ss_dssp HHHSS
T ss_pred Hhhcc
Confidence 87543
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-64 Score=499.50 Aligned_cols=256 Identities=33% Similarity=0.580 Sum_probs=230.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+++|++| +|||||+++++|.+++.+|||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEE
Confidence 4699999999999999999999999999999999876443344567899999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... +.+++..++.++.||+.||+|||++|||||||||+||||+ .++.
T Consensus 111 mEy~~gG~L~~~i~~~-----------------~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~---~~g~ 170 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI-----------------GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMH 170 (311)
T ss_dssp ECCCTTEEHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSC
T ss_pred EecCCCCCHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEc---CCCC
Confidence 9999999999988644 6799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC---CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||+|+.+... ....+.+||+.|||||++.+. ++.++|||||||++|+|++|++||.+.+..+++.+++...
T Consensus 171 vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~ 250 (311)
T 4aw0_A 171 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE 250 (311)
T ss_dssp EEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred EEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Confidence 999999999876432 234578999999999998765 6889999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHH------HhcCcccccc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ------ALSHPWVREG 376 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~------il~hp~f~~~ 376 (577)
..++ ..+|+++++||.+||++||.+|||+.| +++||||+..
T Consensus 251 ~~~p----~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 251 YDFP----EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp CCCC----TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred CCCC----cccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 6654 468999999999999999999999987 5899999874
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-63 Score=487.52 Aligned_cols=255 Identities=33% Similarity=0.628 Sum_probs=212.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.+|+.+|+++ +|||||++++++.+++.+|||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEE
Confidence 4799999999999999999999999999999999876554445567899999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||| +|+|.+++.. ...+++..++.++.||+.||+|||++|||||||||+|||++ .++.
T Consensus 92 mEy~-~g~L~~~l~~-----------------~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~---~~~~ 150 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ-----------------RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLN 150 (275)
T ss_dssp EECC-CEEHHHHHHH-----------------SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTCC
T ss_pred EeCC-CCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEEC---CCCC
Confidence 9999 6899887753 37899999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-C-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||+|+.........+.+||+.|||||++.+. + +.++|||||||++|+|+||+.||.+.+..+++..+..+...
T Consensus 151 vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~ 230 (275)
T 3hyh_A 151 VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT 230 (275)
T ss_dssp EEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred EEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC
Confidence 999999999887766666778999999999999865 3 57899999999999999999999999999999999887665
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
++ ..+|+++.+||.+||+.||++|||+.|+++||||+..
T Consensus 231 ~p----~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 231 LP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp CC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred CC----CCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence 43 4689999999999999999999999999999999853
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-63 Score=498.76 Aligned_cols=258 Identities=33% Similarity=0.573 Sum_probs=228.7
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
...|++++.||+|+||+||+|+++.+|+.||||++...... ..+.+.+|+.+|+.| +|||||+++++|.+++.+||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~i 148 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWV 148 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEE
Confidence 35799999999999999999999999999999999765432 335578999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||+||+|.+++.. ..+++..++.++.||+.||.|||++|||||||||+||||+ .++
T Consensus 149 vmEy~~gg~L~~~l~~------------------~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g 207 (346)
T 4fih_A 149 VMEFLEGGALTDIVTH------------------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDG 207 (346)
T ss_dssp EECCCTTEEHHHHHHH------------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTC
T ss_pred EEeCCCCCcHHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEC---CCC
Confidence 9999999999886632 5689999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCC-CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.|||+|||+|+.+... ....+.+||+.|||||++.+ .|+.++|||||||++|||++|++||.+.+..+.+..+....+
T Consensus 208 ~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~ 287 (346)
T 4fih_A 208 RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP 287 (346)
T ss_dssp CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC
T ss_pred CEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC
Confidence 9999999999876543 44567899999999999875 469999999999999999999999999999888888877543
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.....++.+|+++.+||.+||++||++|||+.|+|+||||++...
T Consensus 288 -~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 288 -PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332 (346)
T ss_dssp -CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred -CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence 233345679999999999999999999999999999999998654
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-63 Score=498.95 Aligned_cols=258 Identities=24% Similarity=0.498 Sum_probs=224.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+++.+|+.||||++.+.... ....+.+.+|+.+|++| +|||||+++++|.+++.+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC-HHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEE
Confidence 5799999999999999999999999999999999876543 34577899999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.++|... +...+++..++.|+.||+.||.|||++|||||||||+||||+ .++.
T Consensus 102 mEy~~gg~L~~~i~~~---------------~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~ 163 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQ---------------KGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGT 163 (350)
T ss_dssp EECCTTCBHHHHHHHT---------------TTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC---TTCC
T ss_pred EeCCCCCcHHHHHHHc---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCC
Confidence 9999999999988543 345689999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
|||+|||+|+...... .....+||+.|||||++.+. ++.++||||||||+|||++|++||.+.+..+++..++.+...
T Consensus 164 vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~ 243 (350)
T 4b9d_A 164 VQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP 243 (350)
T ss_dssp EEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC
T ss_pred EEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC
Confidence 9999999998775432 23467899999999998764 688999999999999999999999999999999999887643
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
..+..+|+++.+||.+||++||.+|||+.++|+||||+..
T Consensus 244 ---~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 244 ---PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred ---CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 2345789999999999999999999999999999999864
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-62 Score=479.91 Aligned_cols=254 Identities=21% Similarity=0.353 Sum_probs=218.4
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----CCeEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DNYVY 173 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~~~~ 173 (577)
|++.+.||+|+||+||+|+++.+++.||||++...... ....+.+.+|+.+|++| +|||||+++++|.+ ++.+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~ 105 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEEE
Confidence 47888999999999999999999999999999765442 34567899999999999 59999999999865 45789
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCcEEeecCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAK 251 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~NILl~~~~ 251 (577)
||||||+||+|.+++... ..+++..++.++.||+.||.|||+++ ||||||||+||||+.
T Consensus 106 lvmEy~~gg~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~-- 166 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRF-----------------KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG-- 166 (290)
T ss_dssp EEEECCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESS--
T ss_pred EEEeCCCCCCHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEEC--
Confidence 999999999999988544 67999999999999999999999998 999999999999973
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChh-HHHHHHHhC
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN 330 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~i~~~ 330 (577)
.++.+||+|||+|+... .....+.+||+.|||||++.+.++.++|||||||++|||+||++||.+.... .++..+..+
T Consensus 167 ~~g~vKl~DFGla~~~~-~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~ 245 (290)
T 3fpq_A 167 PTGSVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG 245 (290)
T ss_dssp TTSCEEECCTTGGGGCC-TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT
T ss_pred CCCCEEEEeCcCCEeCC-CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcC
Confidence 46789999999998654 3445678999999999999999999999999999999999999999876544 444555443
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.. +...+..+++++.+||.+||..||.+|||+.++|+||||++
T Consensus 246 ~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 246 VK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp CC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred CC--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 22 22223457899999999999999999999999999999986
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-61 Score=499.12 Aligned_cols=259 Identities=33% Similarity=0.572 Sum_probs=229.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
..+.|++++.||+|+||.||+|+++.+|+.||||++...... ..+.+.+|+.+|+.| +|||||+++++|.+++.+|
T Consensus 149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~ 224 (423)
T 4fie_A 149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELW 224 (423)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEE
Confidence 346799999999999999999999999999999999765432 345688999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||||||+||+|.+++. ...+++.+++.|+.||+.||.|||++|||||||||+||||+ .+
T Consensus 225 iVmEy~~gG~L~~~i~------------------~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~---~~ 283 (423)
T 4fie_A 225 VVMEFLEGGALTDIVT------------------HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HD 283 (423)
T ss_dssp EEEECCTTEEHHHHHH------------------HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC---TT
T ss_pred EEEeCCCCCcHHHHHh------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc---CC
Confidence 9999999999998663 25689999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCC-CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+.|||+|||+|+.+... ....+.+||+.|||||++.+ .|+.++|||||||++|||++|++||.+.+..+.+..+....
T Consensus 284 g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~ 363 (423)
T 4fie_A 284 GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 363 (423)
T ss_dssp CCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC
T ss_pred CCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC
Confidence 89999999999876543 44567899999999999875 46999999999999999999999999999988888887754
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.. ....+..+|+++.+||.+||+.||++|||+.|+|+||||+....
T Consensus 364 ~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 364 PP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp CC-CCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred CC-CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence 32 33445779999999999999999999999999999999998654
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-61 Score=481.23 Aligned_cols=255 Identities=28% Similarity=0.494 Sum_probs=218.8
Q ss_pred cceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
++|++++.||+|+||+||+|++. .+++.||||++.+..... .....+.+|+++|++| +|||||+++++|.+++.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-EECC------CCCCCC-CCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh-HHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEE
Confidence 47999999999999999999874 468899999997654322 2234578899999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|||||||+||+|.+++... ..+++..++.++.||+.||.|||++|||||||||+|||++ .
T Consensus 102 ~ivmEy~~gg~L~~~l~~~-----------------~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~ 161 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKE-----------------VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---E 161 (304)
T ss_dssp EEEECCCTTCEEHHHHHHH-----------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---T
T ss_pred EEEEEcCCCCCHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEc---C
Confidence 9999999999999988644 6799999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 253 DSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
++.+||+|||+|+.... .....+.+||+.|||||++.+. ++.++|||||||++|||+||++||.+.+..+++..+...
T Consensus 162 ~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~ 241 (304)
T 3ubd_A 162 EGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241 (304)
T ss_dssp TSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred CCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC
Confidence 78999999999986543 3345578999999999998754 689999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
.+.++ +.+|+++.+||.+||++||++||| ++|+++||||+..
T Consensus 242 ~~~~p----~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 242 KLGMP----QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp CCCCC----TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred CCCCC----CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 66543 468999999999999999999998 5899999999864
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-60 Score=477.45 Aligned_cols=252 Identities=27% Similarity=0.363 Sum_probs=219.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|++.++||+|+||+||+|+++.+|+.||||++..... ..+|+.+|+.| +|||||+++++|.+++.+|||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGL-SSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEE
Confidence 468999999999999999999999999999999976543 24699999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC-
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS- 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~- 254 (577)
||||+||+|.+++... ..+++..++.++.||+.||.|||++|||||||||+||||+. ++
T Consensus 129 mEy~~gg~L~~~l~~~-----------------~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~---~g~ 188 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQM-----------------GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS---DGS 188 (336)
T ss_dssp ECCCTTCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECT---TSC
T ss_pred EeccCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeC---CCC
Confidence 9999999999988544 67999999999999999999999999999999999999984 44
Q ss_pred CeeEEecCCCcccCCCCC------ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGKK------FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.+||+|||+|+.+..... ....+||+.|||||++.+. ++.++|||||||++|||+||++||.+.+..+++..+
T Consensus 189 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i 268 (336)
T 4g3f_A 189 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI 268 (336)
T ss_dssp CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHH
T ss_pred EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH
Confidence 699999999987654321 2346899999999998765 689999999999999999999999998888888888
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHH-------------hcCccccccC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-------------LSHPWVREGG 377 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~i-------------l~hp~f~~~~ 377 (577)
....+.+. ..++.+|+++.+||.+||++||.+|||+.|+ |+|||+++..
T Consensus 269 ~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~ 330 (336)
T 4g3f_A 269 ASEPPPIR-EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYK 330 (336)
T ss_dssp HHSCCGGG-GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred HcCCCCch-hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence 88765432 2356799999999999999999999999997 6799998754
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-58 Score=476.90 Aligned_cols=262 Identities=27% Similarity=0.419 Sum_probs=221.9
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 168 (577)
+.++|++++.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|+.| +|||||++++++..
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 129 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYG 129 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTT
T ss_pred CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-chHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccc
Confidence 45689999999999999999999999999999999976543 234567788999999999 59999999998763
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
.+.+|||||||+ |+|.+++. ....+++..++.++.||+.||.|||++|||||||||+|||+
T Consensus 130 ~~~~~~ivmE~~~-g~L~~~i~-----------------~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~ 191 (398)
T 4b99_A 130 EFKSVYVVLDLME-SDLHQIIH-----------------SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV 191 (398)
T ss_dssp TCCCEEEEEECCS-EEHHHHHT-----------------SSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE
T ss_pred cCCEEEEEEeCCC-CCHHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc
Confidence 367999999995 67887663 34789999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCC-----CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||+|+.+... ....+.+||+.|||||++.+ .++.++||||+|||+|||++|++||.+.+.
T Consensus 192 ~---~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~ 268 (398)
T 4b99_A 192 N---ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY 268 (398)
T ss_dssp C---TTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH
T ss_pred C---CCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH
Confidence 8 4789999999999876432 23456799999999998765 358899999999999999999999999998
Q ss_pred hHHHHHHHhCCCCCCC-----------------------C----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 321 DGIFKEVLRNKPDFRR-----------------------K----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~-----------------------~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
.+.+..|+.....+.. . .++.+++++.+||.+||++||.+|||+.|+|+||||
T Consensus 269 ~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f 348 (398)
T 4b99_A 269 VHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348 (398)
T ss_dssp HHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGG
T ss_pred HHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhh
Confidence 8888877653221111 1 134678999999999999999999999999999999
Q ss_pred cccCC
Q 008127 374 REGGD 378 (577)
Q Consensus 374 ~~~~~ 378 (577)
++...
T Consensus 349 ~~~~~ 353 (398)
T 4b99_A 349 AKYHD 353 (398)
T ss_dssp TTTCC
T ss_pred CcCCC
Confidence 97643
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-58 Score=469.08 Aligned_cols=256 Identities=27% Similarity=0.494 Sum_probs=210.6
Q ss_pred cccceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
+.++|++++.||+|+||+||+|+++ .+++.||||.+.+.. ....+.+|+++|+.+.+|||||+++++|.+.+
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 4568999999999999999999875 467899999986543 34567899999999978999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
++|||||||+||+|.+.+ ..+++.+++.++.||+.||.|||++|||||||||+|||++.
T Consensus 94 ~~~lvmE~~~g~~L~~~~--------------------~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~- 152 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDIL--------------------NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR- 152 (361)
T ss_dssp EEEEEEECCCCCCHHHHH--------------------TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET-
T ss_pred EEEEEEeCCCcccHHHHH--------------------cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC-
Confidence 999999999999998865 45899999999999999999999999999999999999984
Q ss_pred CCCCCeeEEecCCCcccCCCC-----------------------------CccccccCCccccchhccc--CCCCCCchh
Q 008127 251 KEDSSLKATDFGLSDFIKPGK-----------------------------KFQDIVGSAYYVAPEVLKR--KSGPESDVW 299 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~--~~~~~~Diw 299 (577)
+.+.+||+|||+|+...... ...+.+||+.|+|||++.+ .++.++|||
T Consensus 153 -~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiW 231 (361)
T 4f9c_A 153 -RLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMW 231 (361)
T ss_dssp -TTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHH
T ss_pred -CCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchh
Confidence 34789999999997543221 1234689999999998865 368899999
Q ss_pred hHHHHHHHHHhCCCCCCCCC-hhHHHHHHHhC--------------------------------------C---------
Q 008127 300 SIGVITYILLCGRRPFWDKT-EDGIFKEVLRN--------------------------------------K--------- 331 (577)
Q Consensus 300 SlG~il~el~tg~~Pf~~~~-~~~~~~~i~~~--------------------------------------~--------- 331 (577)
|+|||+|+|++|+.||...+ ..+.+..|..- .
T Consensus 232 SlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~ 311 (361)
T 4f9c_A 232 SAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSD 311 (361)
T ss_dssp HHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC------------
T ss_pred hhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccc
Confidence 99999999999999996543 33333333210 0
Q ss_pred ---CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 332 ---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 332 ---~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.......|+.+|+++.+||.+||++||++|||++|+|+||||++.
T Consensus 312 ~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 312 IQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp ----------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred cccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 001112356789999999999999999999999999999999874
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-57 Score=488.22 Aligned_cols=263 Identities=34% Similarity=0.624 Sum_probs=239.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+-++|++++.||+|+||.||+|+++.+|+.||||++.... ....+.+.+|+.+|+.| +|||||+++++|.+++.+|
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~ 230 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMV 230 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEE
Confidence 4468999999999999999999999999999999987653 33567789999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||||||+||+|.++|.. ....+++.+++.++.||+.||.|||++||+||||||+|||++.. ..
T Consensus 231 iv~E~~~gg~L~~~i~~----------------~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~-~~ 293 (573)
T 3uto_A 231 MIYEFMSGGELFEKVAD----------------EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RS 293 (573)
T ss_dssp EEEECCCCCBHHHHHTC----------------TTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SC
T ss_pred EEEeecCCCcHHHHHHH----------------hCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC-CC
Confidence 99999999999987632 23679999999999999999999999999999999999999842 35
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+.+||+|||+|+.+.........+||+.|||||++.+. ++.++|||||||++|+|++|.+||.+.+..+.+..+.....
T Consensus 294 ~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~ 373 (573)
T 3uto_A 294 NELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW 373 (573)
T ss_dssp CCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC
T ss_pred CCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCC
Confidence 78999999999988777777788999999999998765 58899999999999999999999999999999999999888
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.++...|+.+|+++.+||.+||+.||.+|||+.|+|+||||+...
T Consensus 374 ~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~ 418 (573)
T 3uto_A 374 NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 418 (573)
T ss_dssp CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCC
T ss_pred CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCC
Confidence 877777889999999999999999999999999999999999754
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-57 Score=451.41 Aligned_cols=256 Identities=27% Similarity=0.460 Sum_probs=198.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN----- 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~----- 170 (577)
.+|++++.||+|+||+||+|+++.+|+.||||++.... .....+.+.+|+.+|++| +|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccccc
Confidence 46999999999999999999999999999999997653 244567899999999999 5999999999987533
Q ss_pred -------eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCC
Q 008127 171 -------YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 243 (577)
Q Consensus 171 -------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~ 243 (577)
++|||||||+||+|.+++.... .....+...++.++.||+.||.|||++|||||||||+
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~--------------~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~ 147 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRC--------------TIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPS 147 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCC--------------SGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcC--------------CCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHH
Confidence 4799999999999999875331 0122456678899999999999999999999999999
Q ss_pred cEEeecCCCCCCeeEEecCCCcccCCCC-------------CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHH
Q 008127 244 NFLFKSAKEDSSLKATDFGLSDFIKPGK-------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 309 (577)
Q Consensus 244 NILl~~~~~~~~vkl~DFGla~~~~~~~-------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~ 309 (577)
|||++ .++.+||+|||+|+...... ...+.+||+.|||||++.+ .++.++|||||||++|||+
T Consensus 148 NILl~---~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell 224 (299)
T 4g31_A 148 NIFFT---MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224 (299)
T ss_dssp GEEEC---TTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred HeEEC---CCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHc
Confidence 99998 47899999999998764322 1234689999999999876 4689999999999999999
Q ss_pred hCCCCCCCCChh-HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 310 CGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 310 tg~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
+ ||.+.... ..+..+... .++ +.++..++.+.+||.+||+.||.+|||+.++|+||||++..
T Consensus 225 ~---Pf~~~~~~~~~~~~~~~~--~~p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 287 (299)
T 4g31_A 225 Y---PFSTQMERVRTLTDVRNL--KFP-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD 287 (299)
T ss_dssp S---CCSSHHHHHHHHHHHHTT--CCC-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred c---CCCCccHHHHHHHHHhcC--CCC-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence 6 88654322 222333322 111 12334567789999999999999999999999999998753
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-56 Score=481.42 Aligned_cols=255 Identities=24% Similarity=0.383 Sum_probs=218.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHH---HHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV---KILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~---~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
++|+++++||+|+||+||+|+++.+|+.||||++.+...........+.+|. .+++.+ +|||||+++++|.+.+.+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEECCEE
Confidence 4699999999999999999999999999999999765432223334445554 444455 699999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|||||||+||+|.++|... ..+++..++.|+.||+.||+|||++|||||||||+||||+ .
T Consensus 268 ylVmEy~~GGdL~~~l~~~-----------------~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld---~ 327 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH-----------------GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---E 327 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH-----------------CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---T
T ss_pred EEEEecCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEe---C
Confidence 9999999999999988644 7799999999999999999999999999999999999998 5
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcc-c-CCCCCCchhhHHHHHHHHHhCCCCCCCCC---hhHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-R-KSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEV 327 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~---~~~~~~~i 327 (577)
+++|||+|||+|+.+... ...+.+||+.|||||++. + .|+.++|||||||++|||++|.+||.+.+ ..++...+
T Consensus 328 ~G~vKL~DFGlA~~~~~~-~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i 406 (689)
T 3v5w_A 328 HGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 406 (689)
T ss_dssp TSCEEECCCTTCEECSSC-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH
T ss_pred CCCEEecccceeeecCCC-CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Confidence 889999999999877543 345679999999999985 3 47899999999999999999999997643 34556666
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
......++ ..+|+++++||.+||++||.+|++ +.+|++||||+..
T Consensus 407 ~~~~~~~p----~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 407 LTMAVELP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp HHCCCCCC----TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred cCCCCCCC----ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 66655443 568999999999999999999998 7999999999974
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-56 Score=442.60 Aligned_cols=250 Identities=24% Similarity=0.370 Sum_probs=204.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+++++.+.||+|+||+||+|++. ..||||++..... .....+.|.+|+.+|++| +|||||++++++.. +.+|||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~-~~~~iV 109 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKT-RHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-SSCEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEC-CeEEEE
Confidence 46899999999999999999754 3699999865433 345678899999999999 59999999998865 568999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.++|.. ....+++.++..|+.||+.||.|||+++||||||||+||||+ .++.
T Consensus 110 mEy~~gGsL~~~l~~----------------~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~---~~~~ 170 (307)
T 3omv_A 110 TQWCEGSSLYKHLHV----------------QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLT 170 (307)
T ss_dssp EECCSSCBHHHHHHT----------------SCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE---TTEE
T ss_pred EEcCCCCCHHHHHhh----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC---CCCc
Confidence 999999999997743 246799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC---CCccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||+|+..... ......+||+.|||||++.+ .++.++|||||||+||||+||+.||.+.+.......++
T Consensus 171 ~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~ 250 (307)
T 3omv_A 171 VKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV 250 (307)
T ss_dssp EEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH
T ss_pred EEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHH
Confidence 999999999876432 23456789999999999853 36789999999999999999999998877665555554
Q ss_pred hCCCCCC--CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 329 RNKPDFR--RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 329 ~~~~~~~--~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
......+ ...++.+|+++.+||.+||+.||++|||+.+++++
T Consensus 251 ~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 294 (307)
T 3omv_A 251 GRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS 294 (307)
T ss_dssp HTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred hcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 4332222 23346789999999999999999999999987553
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-56 Score=446.74 Aligned_cols=264 Identities=22% Similarity=0.352 Sum_probs=218.0
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|.+.+.||+|+||+||+|++. .++..||||++.... ....+.|.+|+++|++| +|||||+++++|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNL-QHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC---HHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC---hHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCC
Confidence 47999999999999999999875 367899999997543 45677899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|||||||++|+|.++|......... .........+++.+++.++.||+.||.|||+++||||||||+||||+
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~----~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~-- 162 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVL----MAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG-- 162 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHH----C----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC--
T ss_pred EEEEEEEcCCCCcHHHHHHhcCccccc----ccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEEC--
Confidence 999999999999999998754211000 00112346799999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||+|+....... ....+||+.|||||++. +.++.++|||||||++|||+| |+.||.+.+..+++.
T Consensus 163 -~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~ 241 (299)
T 4asz_A 163 -ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE 241 (299)
T ss_dssp -GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred -CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 478999999999986543322 22457999999999886 457999999999999999998 999999999999998
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.+..+... ..++.+|+++.+||.+||+.||++|||+.++ ++|++.
T Consensus 242 ~i~~~~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~~ 286 (299)
T 4asz_A 242 CITQGRVL---QRPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQN 286 (299)
T ss_dssp HHHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHH
T ss_pred HHHcCCCC---CCCccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHHH
Confidence 88876532 2235689999999999999999999999999 456654
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-55 Score=442.32 Aligned_cols=263 Identities=20% Similarity=0.276 Sum_probs=210.1
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|.+.++||+|+||+||+|+++ .+++.||||++.... ....+.|.+|+++|++| +|||||+++++|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTML-QHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS---HHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC---HHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECC
Confidence 46899999999999999999865 368899999997543 45678899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|||||||++|+|.+++.......... .........++++.+++.|+.||+.||.|||+++||||||||+||||+
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~--~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~-- 192 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLL--AGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-- 192 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-------------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE--
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccc--cccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC--
Confidence 9999999999999999886431110000 000111235799999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||+|+....... ....+||+.|||||++.+ .++.++|||||||++|||+| |+.||.+.+..+++.
T Consensus 193 -~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~ 271 (329)
T 4aoj_A 193 -QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 271 (329)
T ss_dssp -TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHH
T ss_pred -CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 578999999999987643322 235689999999998875 56899999999999999999 999999999988888
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+..+... ..++.+|+++.+||.+||+.||++|||+.+++++
T Consensus 272 ~i~~g~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~ 313 (329)
T 4aoj_A 272 CITQGREL---ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313 (329)
T ss_dssp HHHHTCCC---CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred HHHcCCCC---CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 88776421 2235689999999999999999999999999763
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-55 Score=436.50 Aligned_cols=265 Identities=18% Similarity=0.241 Sum_probs=216.0
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
..+++.+.||+|+||+||+|... .+++.||||++.... .....+.|.+|+.++++| +|||||+++++|..++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECC
Confidence 35889999999999999999853 467899999986543 233467899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|||||||++|+|.++|............ .........+++..+..|+.||+.||+|||+++||||||||+||||+
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~-- 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGST-DDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY-- 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC------CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC--
T ss_pred EEEEEEEcCCCCcHHHHHHhhCcccccccc-ccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC--
Confidence 999999999999999988643111000000 00011235699999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCC---CccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
+++.+||+|||+|+...... .....+||+.|||||++. +.++.++|||||||+||||+| |..||.+.+..++..
T Consensus 180 -~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~ 258 (308)
T 4gt4_A 180 -DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 258 (308)
T ss_dssp -GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH
T ss_pred -CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 47899999999998764322 234568999999999876 567999999999999999998 899999999988888
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+..+... +.++.+|+++.+|+.+||+.||.+|||+.+|+++
T Consensus 259 ~i~~~~~~---~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 259 MIRNRQVL---PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCCC---CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 88765432 2235789999999999999999999999999874
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-54 Score=456.03 Aligned_cols=299 Identities=30% Similarity=0.601 Sum_probs=260.0
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.++|++.+.||+|+||.||+|.++.+|+.||+|++..... .....+.+.+|+.+++.+ +||||+++++++.+++.+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 85 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHH 85 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEE
Confidence 356789999999999999999999999999999999976553 234567789999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||||+||+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++....
T Consensus 86 ~lv~E~~~gg~L~~~i~~-----------------~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~ 148 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVA-----------------REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLK 148 (444)
T ss_dssp EEEECCCBCCBHHHHHHH-----------------CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSST
T ss_pred EEEEEeCCCCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCC
Confidence 999999999999987753 367999999999999999999999999999999999999986555
Q ss_pred CCCeeEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 253 DSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
++.+||+|||+|....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+..+
T Consensus 149 ~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~ 228 (444)
T 3soa_A 149 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAG 228 (444)
T ss_dssp TCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT
T ss_pred CCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhC
Confidence 7889999999998765433 3356789999999999876 4689999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCCcccHHHHHhhHHhhhhhhhhHHHHHhhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 410 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~~~~~~~~~~lk~~~~~s~l~~~~l~~~~ 410 (577)
...++...|+.+++++.+||.+||+.||.+|||+.++|+||||+..............+..++.|...++++..++..|.
T Consensus 229 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~klk~~~~~~~~ 308 (444)
T 3soa_A 229 AYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVML 308 (444)
T ss_dssp CCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHHHHHSCCCCCHHHHHHHHHHHHHHHHHTTCSCEEC
T ss_pred CCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999999999999999999999999999999998754333333345667888899888888887666553
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-54 Score=440.54 Aligned_cols=299 Identities=30% Similarity=0.610 Sum_probs=259.8
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
..+.++|++.+.||+|+||.||+|.++.+|+.||||++..... .....+.+.+|+.+++.| +||||+++++++.+.+.
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~ 102 (362)
T 2bdw_A 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLHDSIQEESF 102 (362)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCE
Confidence 4466789999999999999999999999999999999976543 234567789999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||+||+|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 103 ~~lv~e~~~gg~L~~~l~-----------------~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~ 165 (362)
T 2bdw_A 103 HYLVFDLVTGGELFEDIV-----------------AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA 165 (362)
T ss_dssp EEEEECCCCSCBHHHHHT-----------------TCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS
T ss_pred EEEEEecCCCCCHHHHHH-----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC
Confidence 999999999999988663 336789999999999999999999999999999999999998654
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
.++.+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+..+
T Consensus 166 ~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~ 245 (362)
T 2bdw_A 166 KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 245 (362)
T ss_dssp TTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred CCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC
Confidence 557899999999988776666667899999999999876 4688999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCCcccHHHHHhhHHhhhhhhhhHHHHHhh
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 409 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~~~~~~~~~~lk~~~~~s~l~~~~l~~~ 409 (577)
...++...|+.+++++.+||.+||..||.+|||+.++|+||||+..............+..++.|....+++..++..+
T Consensus 246 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 324 (362)
T 2bdw_A 246 AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTM 324 (362)
T ss_dssp CCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777788899999999999999999999999999999999865332222334456778888888878777665544
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-54 Score=439.71 Aligned_cols=268 Identities=23% Similarity=0.262 Sum_probs=214.7
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCC-----CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED- 168 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~- 168 (577)
.++|++++.||+|+||+||+|.+..+ ++.||||.+..... ....+.+.+|+.+|.++.+|||||+++++|..
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~--~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC--hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 35899999999999999999987654 36899999875432 34567899999999999767999999999865
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
++.+|||||||++|+|.++|........ .............+++.++..++.||+.||+|||+++||||||||+|||++
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~ 219 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 219 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBC-CC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccc-cccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeC
Confidence 4679999999999999999875421100 000000011235689999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
.++.+||+|||+|+.+..... ....+||+.|||||++.+ .++.++|||||||++|||+| |+.||.+....+.
T Consensus 220 ---~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~ 296 (353)
T 4ase_A 220 ---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 296 (353)
T ss_dssp ---GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred ---CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH
Confidence 478999999999987654332 235689999999998864 57899999999999999998 9999988766555
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+..++....... .++.+++++.+||.+||+.||.+|||+.++++|
T Consensus 297 ~~~~i~~g~~~~--~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 297 FCRRLKEGTRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp HHHHHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcCCCCC--CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 544444333222 235689999999999999999999999999986
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-52 Score=421.58 Aligned_cols=257 Identities=35% Similarity=0.631 Sum_probs=231.4
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..+|++.+.||+|+||.||+|.+..+|+.||||++.+... .....+.+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEE
Confidence 3579999999999999999999999999999999976543 344567789999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 92 v~e~~~~~~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~---~~~ 151 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAH-----------------GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD---ADM 151 (328)
T ss_dssp EECCCTTCBHHHHHHHH-----------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTS
T ss_pred EEECCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEc---CCC
Confidence 99999999999987544 6799999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++............+||+.|+|||++.+.. +.++|||||||++|+|++|+.||.+.+..+....+..+..
T Consensus 152 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~ 231 (328)
T 3fe3_A 152 NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231 (328)
T ss_dssp CEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred CEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence 99999999998877666677889999999999987654 4689999999999999999999999999999999988766
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.++ ..+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 232 ~~p----~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 232 RIP----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp CCC----TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred CCC----CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 544 35789999999999999999999999999999998654
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-52 Score=430.42 Aligned_cols=266 Identities=36% Similarity=0.616 Sum_probs=235.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch---hhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~---~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.+.++|++++.||+|+||.||+|+++.+|+.||||++.+...... ...+.+.+|+.+++.+. ||||++++++|.+.
T Consensus 9 ~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~ 87 (361)
T 2yab_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNIITLHDVYENR 87 (361)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCC-CTTBCCEEEEEECS
T ss_pred ChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCC-CcCCCcEEEEEEeC
Confidence 466789999999999999999999999999999999976543211 23567899999999995 99999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+.+|+|||||+||+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 88 ~~~~lv~e~~~gg~L~~~l~-----------------~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~ 150 (361)
T 2yab_A 88 TDVVLILELVSGGELFDFLA-----------------QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150 (361)
T ss_dssp SEEEEEEECCCSCBHHHHHT-----------------TCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESC
T ss_pred CEEEEEEEcCCCCcHHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeC
Confidence 99999999999999988763 3467999999999999999999999999999999999999974
Q ss_pred CCC-CCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 250 AKE-DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 250 ~~~-~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.+. ...+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+
T Consensus 151 ~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i 230 (361)
T 2yab_A 151 KNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230 (361)
T ss_dssp TTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH
T ss_pred CCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 211 12799999999988776666677889999999999876 4688999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
......++...|+.+++++.+||.+||..||.+|||+.++|+||||+..
T Consensus 231 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 231 TAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp HTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred HhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 8887777666677899999999999999999999999999999999854
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-52 Score=423.74 Aligned_cols=293 Identities=36% Similarity=0.636 Sum_probs=232.0
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
..+.++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.+++++. ||||+++++++...+.
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 122 (349)
T 2w4o_A 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTE 122 (349)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCC-CCCCcceeeeEecCCe
Confidence 456678999999999999999999999999999999987542 3456789999999995 9999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+++||||+++|+|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 123 ~~lv~e~~~~~~L~~~l~-----------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~ 185 (349)
T 2w4o_A 123 ISLVLELVTGGELFDRIV-----------------EKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPA 185 (349)
T ss_dssp EEEEECCCCSCBHHHHHT-----------------TCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSS
T ss_pred EEEEEEeCCCCCHHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCC
Confidence 999999999999988663 236689999999999999999999999999999999999998544
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH-HHHHHHh
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLR 329 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~-~~~~i~~ 329 (577)
.++.+||+|||+++...........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+..... .+..+..
T Consensus 186 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~ 265 (349)
T 2w4o_A 186 PDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN 265 (349)
T ss_dssp TTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT
T ss_pred CCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh
Confidence 578999999999987765545556789999999998876 46889999999999999999999998766554 6677777
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCCcccHHHHHhhHHhhhhhhhhHHHHHhh
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 409 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~~~~~~~~~~lk~~~~~s~l~~~~l~~~ 409 (577)
....+....++.++.++.+||.+||..||.+|||+.++|+||||+....... ........++.+....++++......
T Consensus 266 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (349)
T 2w4o_A 266 CEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFV--HMDTAQKKLQEFNARRKLKAAVKAVV 343 (349)
T ss_dssp TCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCCCS--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCccchh--hhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666667889999999999999999999999999999999997554332 22345677788888778777665543
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-52 Score=429.04 Aligned_cols=302 Identities=30% Similarity=0.562 Sum_probs=241.9
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC--chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.+.++|++.+.||+|+||.||+|.++.+|+.||||++...... .....+.+.+|+.+++.+ +||||+++++++...+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~ 99 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDG 99 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETT
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCC
Confidence 3567899999999999999999999999999999998653211 112356789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+|||||+||+|.+.+.... .....+++..++.++.||+.||.|||++||+||||||+|||++..
T Consensus 100 ~~~lv~e~~~g~~L~~~l~~~~-------------~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~ 166 (351)
T 3c0i_A 100 MLYMVFEFMDGADLCFEIVKRA-------------DAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK 166 (351)
T ss_dssp EEEEEEECCSSCBHHHHHHHHH-------------HTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSS
T ss_pred EEEEEEeCCCCCCHHHHHHHhc-------------ccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecC
Confidence 9999999999999988775431 123568999999999999999999999999999999999999864
Q ss_pred CCCCCeeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+....+||+|||++........ ....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+. ....+..+.
T Consensus 167 ~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~ 245 (351)
T 3c0i_A 167 ENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGII 245 (351)
T ss_dssp STTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHH
T ss_pred CCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHH
Confidence 4556799999999987654332 3456899999999998754 588999999999999999999999775 456777777
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCCcccHHHHHhhHHhhhhhhhhHHHHHh
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRA 408 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~~~~~~~~~~lk~~~~~s~l~~~~l~~ 408 (577)
.+...+....|+.+++++.+||.+||..||.+|||+.++|+||||+..............+..++.+....+++..++..
T Consensus 246 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 325 (351)
T 3c0i_A 246 KGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAA 325 (351)
T ss_dssp HTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHHHHSCCSCCHHHHHHHHHHHHHHC--------
T ss_pred cCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666555556778999999999999999999999999999999987543222222234566777777666666655544
Q ss_pred h
Q 008127 409 L 409 (577)
Q Consensus 409 ~ 409 (577)
+
T Consensus 326 ~ 326 (351)
T 3c0i_A 326 V 326 (351)
T ss_dssp -
T ss_pred H
Confidence 3
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-52 Score=427.12 Aligned_cols=257 Identities=28% Similarity=0.534 Sum_probs=224.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|+++.+|+.||||++.+...........+.+|+.++..+.+||||+++++++.+.+.+|+|
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 47999999999999999999999999999999997654333345677889999999987799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .+++
T Consensus 103 ~E~~~gg~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~---~~g~ 162 (353)
T 3txo_A 103 MEFVNGGDLMFHIQKS-----------------RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD---HEGH 162 (353)
T ss_dssp EECCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSC
T ss_pred EeCCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEEC---CCCC
Confidence 9999999999877543 6799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||+|+... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+++..+......
T Consensus 163 ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~ 242 (353)
T 3txo_A 163 CKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV 242 (353)
T ss_dssp EEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred EEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Confidence 9999999998643 2334456789999999998865 4688999999999999999999999999999999999988766
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCH------HHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~------~~il~hp~f~~~ 376 (577)
++ ..+++++.+||.+||..||.+||++ .++++||||+..
T Consensus 243 ~p----~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 243 YP----TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp CC----TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred CC----CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 54 3478999999999999999999999 899999999874
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-52 Score=425.28 Aligned_cols=263 Identities=29% Similarity=0.548 Sum_probs=235.8
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.++|++.+.||+|+||.||+|.+..+|+.||+|.+.... .....+.+|+.+++.+ +||||+++++++.+.+.+
T Consensus 2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~ 76 (321)
T 1tki_A 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIA-RHRNILHLHESFESMEEL 76 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEE
T ss_pred chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----ccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEE
Confidence 35678999999999999999999999999999999986542 3456788999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||||+||+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.. .
T Consensus 77 ~lv~e~~~g~~L~~~l~~----------------~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-~ 139 (321)
T 1tki_A 77 VMIFEFISGLDIFERINT----------------SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-R 139 (321)
T ss_dssp EEEECCCCCCBHHHHHTS----------------SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-S
T ss_pred EEEEEeCCCCCHHHHHHh----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-C
Confidence 999999999999887632 23469999999999999999999999999999999999999842 2
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
++.+||+|||++.............||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+....
T Consensus 140 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~ 219 (321)
T 1tki_A 140 SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAE 219 (321)
T ss_dssp CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCC
Confidence 688999999999988766666677899999999998766 4889999999999999999999999999999999999888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..++...|+.+|+++.+||.+||..||.+|||+.++|+||||++..
T Consensus 220 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred CCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 7776666778999999999999999999999999999999998754
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-52 Score=428.92 Aligned_cols=258 Identities=33% Similarity=0.517 Sum_probs=206.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++++.||+|+||.||+|+++.+|+.||||++..... ..+.+.+|+.+++.+. ||||+++++++...+.+|+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT----SCHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc----ccHHHHHHHHHHHhCC-CCCCCcEEEEEeeCCEEEE
Confidence 4589999999999999999999999999999999976543 2356789999999995 9999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.. ..+
T Consensus 94 v~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~-~~~ 155 (361)
T 3uc3_A 94 IMEYASGGELYERICNA-----------------GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS-PAP 155 (361)
T ss_dssp EEECCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS-SSC
T ss_pred EEEeCCCCCHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC-CCc
Confidence 99999999999877543 579999999999999999999999999999999999999841 234
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCC-CCchhhHHHHHHHHHhCCCCCCCCCh----hHHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGP-ESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVL 328 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-~~DiwSlG~il~el~tg~~Pf~~~~~----~~~~~~i~ 328 (577)
.+||+|||+|+...........+||+.|+|||++.+. +.. ++|||||||++|+|++|+.||.+... ......+.
T Consensus 156 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~ 235 (361)
T 3uc3_A 156 RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235 (361)
T ss_dssp CEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHH
T ss_pred eEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence 5999999999865544445567899999999988654 343 48999999999999999999987544 33444455
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.....++ ....+++++.+||.+||..||.+|||+.++++||||....
T Consensus 236 ~~~~~~~--~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 282 (361)
T 3uc3_A 236 SVKYSIP--DDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNL 282 (361)
T ss_dssp TTCCCCC--TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred cCCCCCC--CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence 4443332 2346899999999999999999999999999999997653
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-51 Score=417.76 Aligned_cols=256 Identities=30% Similarity=0.525 Sum_probs=227.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|+++.+|+.||||++.+...........+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEEE
Confidence 4799999999999999999999999999999999765332233466788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 84 ~E~~~gg~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~ 143 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE-----------------RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGH 143 (337)
T ss_dssp EECCTTCBHHHHHHHH-----------------SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSC
T ss_pred EeCCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEEC---CCCC
Confidence 9999999998877543 6789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccC-CCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||+++... ........+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+...++..+......
T Consensus 144 vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~ 223 (337)
T 1o6l_A 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223 (337)
T ss_dssp EEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred EEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC
Confidence 9999999998643 33445677999999999998754 589999999999999999999999999988888888887665
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
++ ..+++++.+||.+||..||.+|| ++.++++||||+..
T Consensus 224 ~p----~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 224 FP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp CC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred CC----CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 44 35889999999999999999999 99999999999864
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=426.91 Aligned_cols=257 Identities=25% Similarity=0.479 Sum_probs=222.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+++.+++.||||++.+...........+.+|+.++.++.+||||++++++|.+.+.+|+|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 47999999999999999999999999999999998765444445566889999999886799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .+++
T Consensus 132 ~E~~~gg~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~---~~g~ 191 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQ-----------------RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGH 191 (396)
T ss_dssp EECCTTCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSC
T ss_pred EEcCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEC---CCCC
Confidence 9999999998877543 6799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcc-cCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCC---------ChhHHH
Q 008127 256 LKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK---------TEDGIF 324 (577)
Q Consensus 256 vkl~DFGla~~-~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~---------~~~~~~ 324 (577)
+||+|||+|+. ..........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||... ....++
T Consensus 192 ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~ 271 (396)
T 4dc2_A 192 IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 271 (396)
T ss_dssp EEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHH
T ss_pred EEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHH
Confidence 99999999986 3344556678999999999998764 588999999999999999999999632 233456
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCH------HHHhcCcccccc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG 376 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~------~~il~hp~f~~~ 376 (577)
..+......++ ..+++++.+||.+||+.||.+||++ .++++||||+..
T Consensus 272 ~~i~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i 325 (396)
T 4dc2_A 272 QVILEKQIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325 (396)
T ss_dssp HHHHHCCCCCC----TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred HHHhccccCCC----CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence 66776655544 4589999999999999999999985 899999999864
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-51 Score=418.05 Aligned_cols=257 Identities=27% Similarity=0.492 Sum_probs=227.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|+++.+|+.||||++.+...........+.+|..++..+.+||||+++++++.+.+.+|+|
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 47999999999999999999999999999999997653322234567889999998876799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 97 ~E~~~gg~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~ 156 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQSC-----------------HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGH 156 (345)
T ss_dssp EECCTTCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSC
T ss_pred EeCCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEEC---CCCC
Confidence 9999999999877543 6789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||+|+.... .......+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+++..+....+.
T Consensus 157 vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~ 236 (345)
T 1xjd_A 157 IKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF 236 (345)
T ss_dssp EEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred EEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCC
Confidence 99999999986432 3345567899999999988764 588999999999999999999999999999999999887665
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHH-HHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAA-QALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~-~il~hp~f~~~ 376 (577)
++ ..+++++.+||.+||..||.+||++. ++++||||+..
T Consensus 237 ~p----~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 237 YP----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp CC----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred CC----cccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 44 35889999999999999999999998 99999999875
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-50 Score=412.80 Aligned_cols=257 Identities=25% Similarity=0.467 Sum_probs=223.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|+++.+|+.||||++.+...........+.+|+.++.++.+||||+++++++.+.+.+|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 47999999999999999999999999999999998766555556778899999999886799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 89 ~e~~~gg~L~~~l~~~-----------------~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~ 148 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ-----------------RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGH 148 (345)
T ss_dssp ECCCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSC
T ss_pred EeCCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC---CCCC
Confidence 9999999998877543 5789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccC-CCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCC---------CChhHHH
Q 008127 256 LKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWD---------KTEDGIF 324 (577)
Q Consensus 256 vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~---------~~~~~~~ 324 (577)
+||+|||+++... ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.. .....++
T Consensus 149 ~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 228 (345)
T 3a8x_A 149 IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 228 (345)
T ss_dssp EEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHH
T ss_pred EEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHH
Confidence 9999999998643 33445677999999999988764 58899999999999999999999965 2334456
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCH------HHHhcCcccccc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG 376 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~------~~il~hp~f~~~ 376 (577)
..+......++ ..+++++.+||.+||..||.+||++ .++++||||+..
T Consensus 229 ~~i~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 282 (345)
T 3a8x_A 229 QVILEKQIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282 (345)
T ss_dssp HHHHHCCCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred HHHHcCCCCCC----CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence 66666655443 4588999999999999999999995 899999999864
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-51 Score=414.86 Aligned_cols=266 Identities=36% Similarity=0.632 Sum_probs=232.6
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc---hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---PIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~---~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.+.++|++.+.||+|+||.||+|.++.+|+.||||++....... ....+.+.+|+.+++.+. ||||+++++++...
T Consensus 8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~ 86 (326)
T 2y0a_A 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENK 86 (326)
T ss_dssp CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECS
T ss_pred CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEeC
Confidence 45678999999999999999999999999999999987654321 124577899999999994 99999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+.+|+|||||++|+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~-----------------~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~ 149 (326)
T 2y0a_A 87 TDVILILELVAGGELFDFLA-----------------EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 149 (326)
T ss_dssp SEEEEEEECCCSCBHHHHHT-----------------TSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESC
T ss_pred CEEEEEEEcCCCCCHHHHHH-----------------hcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEec
Confidence 99999999999999988763 2367999999999999999999999999999999999999984
Q ss_pred CC-CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 250 AK-EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 250 ~~-~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.+ ....+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+
T Consensus 150 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~ 229 (326)
T 2y0a_A 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229 (326)
T ss_dssp SSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH
Confidence 22 123799999999988765555667789999999999875 4688999999999999999999999999888888888
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
......++...++.+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 230 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp HHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred HhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 8776666555556789999999999999999999999999999999864
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-51 Score=417.09 Aligned_cols=257 Identities=25% Similarity=0.439 Sum_probs=227.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++++.||+|+||.||+|+++.+|+.||||++.+.........+.+.+|..++..+.+||||+++++++...+.+|+|
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 47999999999999999999999999999999997654322334567889999998886799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .+++
T Consensus 100 ~E~~~gg~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~ 159 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQV-----------------GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGH 159 (353)
T ss_dssp EECCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSC
T ss_pred EeCCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEc---CCCc
Confidence 9999999999887543 5789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||+|+... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+++..++.....
T Consensus 160 vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~ 239 (353)
T 2i0e_A 160 IKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA 239 (353)
T ss_dssp EEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred EEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Confidence 9999999998643 3334556789999999998875 4588999999999999999999999999999999999987765
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
++ ..+++++.+||.+||..||.+|| ++.++++||||+..
T Consensus 240 ~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~ 283 (353)
T 2i0e_A 240 YP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283 (353)
T ss_dssp CC----TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred CC----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence 54 46899999999999999999999 47999999999863
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=403.28 Aligned_cols=268 Identities=34% Similarity=0.654 Sum_probs=227.3
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
...+.++|.+.+.||+|+||.||+|.+..++..||+|++..... ....+.+.+|+.+++.+ +||||+++++++...+
T Consensus 17 ~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~ 93 (285)
T 3is5_A 17 QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYH 93 (285)
T ss_dssp SSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred CCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc--chhHHHHHHHHHHHHhC-CCchHHhHHHheecCC
Confidence 34566789999999999999999999999999999999876542 23457789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+|||||++|+|.+.+.... .....+++..++.++.||+.||.|||++||+||||||+|||++..
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~ 160 (285)
T 3is5_A 94 NMYIVMETCEGGELLERIVSAQ-------------ARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT 160 (285)
T ss_dssp EEEEEECCCSCCBHHHHHHHHH-------------HHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSS
T ss_pred eEEEEEEeCCCCcHHHHHHhhh-------------hcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecC
Confidence 9999999999999999885431 234679999999999999999999999999999999999999754
Q ss_pred CCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 251 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
+.++.+||+|||++.............||+.|+|||++.+.++.++|||||||++|+|++|+.||.+....+....+...
T Consensus 161 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~ 240 (285)
T 3is5_A 161 SPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK 240 (285)
T ss_dssp STTCCEEECCCCCCCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred CCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC
Confidence 45688999999999877665555677899999999999888899999999999999999999999998888887777666
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.+.+... ...+++++.+||.+||..||.+|||+.++|+||||++
T Consensus 241 ~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 241 EPNYAVE-CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp CCCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred Ccccccc-cCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 5544432 2347899999999999999999999999999999985
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-51 Score=430.46 Aligned_cols=259 Identities=28% Similarity=0.469 Sum_probs=225.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.++..+ +|||||+++++|.+.+.+|+|
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV 147 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMV 147 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEE
Confidence 5799999999999999999999999999999998764322222234578899999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++.. ..+++..++.++.||+.||.|||++|||||||||+|||++ .+++
T Consensus 148 ~E~~~gg~L~~~l~~------------------~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~---~~g~ 206 (410)
T 3v8s_A 148 MEYMPGGDLVNLMSN------------------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGH 206 (410)
T ss_dssp ECCCTTEEHHHHHHH------------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSC
T ss_pred EeCCCCCcHHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeEC---CCCC
Confidence 999999999886632 4589999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhcccC-----CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~-----~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||+|+....... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..++
T Consensus 207 ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~ 286 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286 (410)
T ss_dssp EEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred EEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHH
Confidence 99999999987654332 3467899999999998653 4689999999999999999999999999999999988
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
.....+..+.++.+|+++.+||.+||+.+|.+ ||++.++++||||+..
T Consensus 287 ~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 287 NHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp THHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred hccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 76543444445679999999999999999998 9999999999999975
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-50 Score=399.41 Aligned_cols=267 Identities=32% Similarity=0.668 Sum_probs=239.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.++|++.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+.+|+.+++++ +||||+++++++...+..
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 80 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFH 80 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEE
Confidence 456789999999999999999999999999999999876543 234567789999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++..+.
T Consensus 81 ~~v~e~~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~ 143 (284)
T 3kk8_A 81 YLVFDLVTGGELFEDIVAR-----------------EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 143 (284)
T ss_dssp EEEECCCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSST
T ss_pred EEEEecCCCCCHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCC
Confidence 9999999999998877543 66899999999999999999999999999999999999986545
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
.+.+||+|||++.............||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.........+..+.
T Consensus 144 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~ 223 (284)
T 3kk8_A 144 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 223 (284)
T ss_dssp TCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred CCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcc
Confidence 567999999999877666666677899999999988765 5889999999999999999999999999999999998888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
..++...+..+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (284)
T 3kk8_A 224 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRER 270 (284)
T ss_dssp CCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred ccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChh
Confidence 77777777889999999999999999999999999999999987543
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=409.47 Aligned_cols=254 Identities=27% Similarity=0.551 Sum_probs=225.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|+++.+|+.||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+.+.+|+|
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEEE
Confidence 4799999999999999999999999999999999765332223456788999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 85 ~e~~~gg~L~~~l~~-----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~ 144 (318)
T 1fot_A 85 MDYIEGGELFSLLRK-----------------SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---KNGH 144 (318)
T ss_dssp ECCCCSCBHHHHHHH-----------------TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC---TTSC
T ss_pred EeCCCCCCHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEc---CCCC
Confidence 999999999987743 36789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||+++.... .....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..++.....+
T Consensus 145 ~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 222 (318)
T 1fot_A 145 IKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF 222 (318)
T ss_dssp EEECCCSSCEECSS--CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCC
T ss_pred EEEeecCcceecCC--ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 99999999987543 33456899999999988754 5889999999999999999999999999989999998876554
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
+ +.+++++.+||.+||..||.+|| +++++++||||+..
T Consensus 223 p----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 223 P----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp C----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred C----CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 4 45789999999999999999999 99999999999864
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-51 Score=412.00 Aligned_cols=247 Identities=23% Similarity=0.284 Sum_probs=188.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN---- 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 170 (577)
.++|.+.+.||+|+||+||+|++ +|+.||||++.... ........|+..+.++ +|||||++++++..++
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~ 74 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCce
Confidence 35799999999999999999975 68999999986542 1222234556666677 5999999999997643
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--------CceeccCCC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--------GLVHRDMKP 242 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~--------~iiHrDlKp 242 (577)
.+|||||||++|+|.+++.. ..+++..+..++.|++.||.|||++ +||||||||
T Consensus 75 ~~~lV~Ey~~~gsL~~~l~~------------------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp 136 (303)
T 3hmm_A 75 QLWLVSDYHEHGSLFDYLNR------------------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 136 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHH------------------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCG
T ss_pred EEEEEecCCCCCcHHHHHHh------------------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCc
Confidence 68999999999999998742 4588999999999999999999987 999999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCCCCC-----ccccccCCccccchhcccC-------CCCCCchhhHHHHHHHHHh
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLC 310 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~DiwSlG~il~el~t 310 (577)
+||||+ .++.+||+|||+|+....... ....+||+.|||||++.+. ++.++|||||||+||||+|
T Consensus 137 ~NILl~---~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~t 213 (303)
T 3hmm_A 137 KNILVK---KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213 (303)
T ss_dssp GGEEEC---TTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEC---CCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHH
Confidence 999998 478999999999987654322 2346899999999998753 3568999999999999999
Q ss_pred CCCCCCCC---------------ChhHHHHHHHhCCCCCCCC-CC--CCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 311 GRRPFWDK---------------TEDGIFKEVLRNKPDFRRK-PW--PSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 311 g~~Pf~~~---------------~~~~~~~~i~~~~~~~~~~-~~--~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
|.+||... ....+...+.........+ .+ ...++.+.+|+.+||+.||++|||+.++++
T Consensus 214 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 214 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred CCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 97765321 1123333333332211111 01 112346889999999999999999999875
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=418.84 Aligned_cols=265 Identities=35% Similarity=0.598 Sum_probs=234.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.++|++.+.||+|+||.||+|.++.+|+.||+|++.... ......+.+|+.+++.+ +||||+++++++.+.+.+
T Consensus 48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~ 123 (387)
T 1kob_A 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEM 123 (387)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEE
T ss_pred ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEE
Confidence 34568999999999999999999999999999999987543 23456789999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||||+||+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++. +.
T Consensus 124 ~lv~E~~~gg~L~~~l~~----------------~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~ 186 (387)
T 1kob_A 124 VLILEFLSGGELFDRIAA----------------EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KK 186 (387)
T ss_dssp EEEEECCCCCBHHHHTTC----------------TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TT
T ss_pred EEEEEcCCCCcHHHHHHh----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec-CC
Confidence 999999999999886632 2346899999999999999999999999999999999999974 23
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
.+.+||+|||++............+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+....
T Consensus 187 ~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 266 (387)
T 1kob_A 187 ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD 266 (387)
T ss_dssp CCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCC
T ss_pred CCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence 578999999999887665555667899999999998764 5889999999999999999999999998888888888877
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
..+....+..+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 267 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 267 WEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp CCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred CCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 77777777889999999999999999999999999999999997544
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=401.79 Aligned_cols=265 Identities=40% Similarity=0.760 Sum_probs=237.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.++|++.+.||+|+||.||+|.+..++..||+|++..... ...+.+.+|+.+++.+ +||||+++++++...+.+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDI 81 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEE
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeE
Confidence 456789999999999999999999999999999999876532 2456789999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+...+.
T Consensus 82 ~lv~e~~~~~~L~~~~~~~-----------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~ 144 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHK-----------------RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSP 144 (277)
T ss_dssp EEEEECCCSCBHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSST
T ss_pred EEEEeccCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCC
Confidence 9999999999998877543 66899999999999999999999999999999999999954346
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
++.+||+|||++.............||+.|+|||++.+.++.++|||||||++|+|++|..||.+....+....+..+..
T Consensus 145 ~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~ 224 (277)
T 3f3z_A 145 DSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTF 224 (277)
T ss_dssp TCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred CCcEEEEecccceeccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC
Confidence 78999999999988776666667789999999999988889999999999999999999999999998888888888877
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.++...+..+++.+.+||.+||+.||.+|||+.++|+||||++...
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 270 (277)
T 3f3z_A 225 TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270 (277)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence 6665555678999999999999999999999999999999987543
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-51 Score=417.73 Aligned_cols=256 Identities=34% Similarity=0.592 Sum_probs=220.4
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
-++|++.+.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEE
Confidence 35799999999999999999999999999999998754322222345789999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+ +|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 87 v~E~~-~g~l~~~l~~~-----------------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~ 145 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK-----------------KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD---DNL 145 (336)
T ss_dssp EECCC-CEEHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEEC---TTC
T ss_pred EEECC-CCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEc---CCC
Confidence 99999 78998877544 6799999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++............+||+.|+|||++.+.. ++++|||||||++|+|++|+.||.+.........+.....
T Consensus 146 ~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~ 225 (336)
T 3h4j_B 146 NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVY 225 (336)
T ss_dssp CEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCC
T ss_pred CEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCC
Confidence 99999999998877666667789999999999987654 6789999999999999999999987665544433332222
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
. ....+|+++.+||.+||..||.+|||+.++++||||+..
T Consensus 226 ~----~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 226 V----MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp C----CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred C----CcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 2 224588999999999999999999999999999999864
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-50 Score=412.21 Aligned_cols=254 Identities=28% Similarity=0.505 Sum_probs=226.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|+++.+|+.||||++.+.........+.+.+|+.+++.+ +||||+++++++.+.+.+|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEE
Confidence 4799999999999999999999999999999999765432333567789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 120 ~e~~~gg~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~ 179 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI-----------------GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGY 179 (350)
T ss_dssp EECCTTCBHHHHHHHH-----------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSC
T ss_pred EcCCCCCcHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEEC---CCCC
Confidence 9999999999887543 5789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||+++.... .....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+..+...+
T Consensus 180 ~kL~DFg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~ 257 (350)
T 1rdq_E 180 IQVTDFGFAKRVKG--RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257 (350)
T ss_dssp EEECCCTTCEECSS--CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred EEEcccccceeccC--CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 99999999987643 23456899999999988654 5889999999999999999999999999999999998876654
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
+ ..+++++.+||.+||+.||.+||+ +.++++||||+..
T Consensus 258 p----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 258 P----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp C----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred C----CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence 4 458899999999999999999998 9999999999863
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-50 Score=413.13 Aligned_cols=260 Identities=35% Similarity=0.622 Sum_probs=226.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+.++|++.+.||+|+||.||+|.++.+|+.||||++.+... ...+|++++.++.+||||+++++++.+.+.+|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 55689999999999999999999999999999999976542 13568888988867999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC-C
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-E 252 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~-~ 252 (577)
+|||||+||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+...+ .
T Consensus 93 lv~E~~~gg~L~~~i~~-----------------~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~ 155 (342)
T 2qr7_A 93 VVTELMKGGELLDKILR-----------------QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGN 155 (342)
T ss_dssp EEECCCCSCBHHHHHHT-----------------CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCS
T ss_pred EEEeCCCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCC
Confidence 99999999999987742 36799999999999999999999999999999999999986421 2
Q ss_pred CCCeeEEecCCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCC---CChhHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWD---KTEDGIFKEV 327 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~---~~~~~~~~~i 327 (577)
.+.+||+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+ ....+++..+
T Consensus 156 ~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i 235 (342)
T 2qr7_A 156 PESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI 235 (342)
T ss_dssp GGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHH
T ss_pred cCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHH
Confidence 246999999999876433 334567899999999998764 68899999999999999999999976 4566788888
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..+...+....|+.+|+++.+||.+||..||.+|||+.++++||||....
T Consensus 236 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~~ 285 (342)
T 2qr7_A 236 GSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWD 285 (342)
T ss_dssp HHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTGG
T ss_pred ccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCcc
Confidence 88887777777888999999999999999999999999999999997643
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-50 Score=415.41 Aligned_cols=256 Identities=24% Similarity=0.485 Sum_probs=223.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+ +|||||+++++|.+.+.+|+|
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEE
Confidence 5799999999999999999999999999999999765433334567789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 94 ~e~~~gg~L~~~l~-----------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~ 153 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQ-----------------QNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD---EHGH 153 (384)
T ss_dssp ECCCTTEEHHHHHH-----------------TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSC
T ss_pred EecCCCCcHHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEC---CCCC
Confidence 99999999988764 236799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCC---ChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDK---TEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~---~~~~~~~~i~ 328 (577)
+||+|||+|............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||... ...+....+.
T Consensus 154 vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~ 233 (384)
T 4fr4_A 154 VHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE 233 (384)
T ss_dssp EEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH
T ss_pred EEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh
Confidence 99999999998776666678899999999999853 3688999999999999999999999753 3344555555
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC-HHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-AAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-~~~il~hp~f~~~ 376 (577)
.....++ ..+++.+.+||.+||..||.+||+ +.++++||||+..
T Consensus 234 ~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 234 TTVVTYP----SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp HCCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred hcccCCC----CcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 5544433 457899999999999999999998 9999999999874
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-50 Score=408.35 Aligned_cols=267 Identities=32% Similarity=0.612 Sum_probs=209.2
Q ss_pred cccceeee---eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 94 FDRRYTIG---KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 94 ~~~~y~~~---~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
+.++|++. +.||+|+||.||+|.++.+|+.||||++.+. ....+.+|+.+++.+.+||||+++++++.+.+
T Consensus 6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~ 79 (325)
T 3kn6_A 6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL 79 (325)
T ss_dssp HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Confidence 34567775 7899999999999999999999999998653 34567899999999977999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+|||||+||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++..
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~ 142 (325)
T 3kn6_A 80 HTFLVMELLNGGELFERIKK-----------------KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDE 142 (325)
T ss_dssp EEEEEECCCCSCBHHHHHHH-----------------CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC-
T ss_pred EEEEEEEccCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecC
Confidence 99999999999999987743 3679999999999999999999999999999999999999854
Q ss_pred CCCCCeeEEecCCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCC-------hh
Q 008127 251 KEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT-------ED 321 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~-------~~ 321 (577)
+.+..+||+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.. ..
T Consensus 143 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~ 222 (325)
T 3kn6_A 143 NDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV 222 (325)
T ss_dssp ---CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHH
T ss_pred CCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHH
Confidence 44458999999999865433 334566899999999988754 5889999999999999999999997643 34
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCCc
Q 008127 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383 (577)
Q Consensus 322 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~~ 383 (577)
+.+..+..+...+....|+.+++++.+||.+||..||.+|||+.++++||||+........+
T Consensus 223 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~~~~~ 284 (325)
T 3kn6_A 223 EIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNP 284 (325)
T ss_dssp HHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCCCCSC
T ss_pred HHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccCCCCC
Confidence 66777777766666555677999999999999999999999999999999999865544433
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-50 Score=401.24 Aligned_cols=259 Identities=27% Similarity=0.483 Sum_probs=222.5
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
..++|++.+.||+|+||.||+|.+..+|+.||||++..... ...+.+.+|+.+++.+ +||||+++++++...+.+|
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~ 93 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELW 93 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc---cHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEE
Confidence 34689999999999999999999999999999999875543 2346688999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|||||+||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 94 lv~e~~~~~~L~~~~~~------------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~ 152 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTE------------------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MD 152 (297)
T ss_dssp EEEECCTTCBHHHHHHH------------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TT
T ss_pred EEEECCCCCCHHHHHhh------------------cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC---CC
Confidence 99999999999887632 3589999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+.+||+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.........+....
T Consensus 153 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 232 (297)
T 3fxz_A 153 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG 232 (297)
T ss_dssp CCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC
T ss_pred CCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence 889999999998765432 34456899999999988654 5889999999999999999999999888777666655443
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.. .....+.+++.+.+||.+||..||.+|||+.++|+||||+....
T Consensus 233 ~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 233 TP-ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp SC-CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred CC-CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 22 11223568899999999999999999999999999999997543
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-50 Score=407.99 Aligned_cols=279 Identities=27% Similarity=0.491 Sum_probs=237.6
Q ss_pred CCCCCccccccccceeee-eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEE
Q 008127 84 KRTDFGYDKDFDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162 (577)
Q Consensus 84 ~~~~~~~~~~~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 162 (577)
....+...+.+.++|.+. +.||+|+||.||+|++..+|+.||||++...... ......+.+|+.+++.+.+||||+++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~iv~~ 94 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-QDCRAEILHEIAVLELAKSCPRVINL 94 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT-EECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHhccCCCCEEEE
Confidence 344455667788899998 8999999999999999999999999998765432 23457789999999999878999999
Q ss_pred EEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCC
Q 008127 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 242 (577)
Q Consensus 163 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp 242 (577)
++++...+.+|+|||||++|+|.+++.. .....+++..++.++.||+.||.|||++||+||||||
T Consensus 95 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~---------------~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp 159 (327)
T 3lm5_A 95 HEVYENTSEIILILEYAAGGEIFSLCLP---------------ELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKP 159 (327)
T ss_dssp EEEEECSSEEEEEEECCTTEEGGGGGSS---------------CC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCG
T ss_pred EEEEEeCCeEEEEEEecCCCcHHHHHHH---------------hcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCh
Confidence 9999999999999999999999875521 1236799999999999999999999999999999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED 321 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 321 (577)
+|||++....++.+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....
T Consensus 160 ~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 239 (327)
T 3lm5_A 160 QNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ 239 (327)
T ss_dssp GGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred HHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch
Confidence 999998543468999999999988765555566789999999998875 4588999999999999999999999999988
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 322 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
+.+..+......+....++.+++.+.+||.+||..||.+|||+.++|+||||+...-
T Consensus 240 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~ 296 (327)
T 3lm5_A 240 ETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF 296 (327)
T ss_dssp HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred HHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence 888888887777777777889999999999999999999999999999999997643
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-51 Score=426.67 Aligned_cols=262 Identities=26% Similarity=0.455 Sum_probs=224.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|+++++||+|+||+||+|+++.+++.||||++.+...........+.+|+.++..+ +||||++++++|.+.+.+|+
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~l 151 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLYL 151 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEEE
Confidence 35799999999999999999999999999999999764322222334478999999998 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||+||+|.+++... ...+++..++.++.||+.||.|||++|||||||||+|||++ .++
T Consensus 152 V~Ey~~gg~L~~~l~~~----------------~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~---~~g 212 (437)
T 4aw2_A 152 VMDYYVGGDLLTLLSKF----------------EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNG 212 (437)
T ss_dssp EECCCTTCBHHHHHHTT----------------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTS
T ss_pred EEecCCCCcHHHHHHHc----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEc---CCC
Confidence 99999999999877431 36799999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCC--ccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 255 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
.+||+|||+|+....... ....+||+.|+|||++. +.++.++|||||||++|||++|+.||.+.+..+.+..
T Consensus 213 ~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~ 292 (437)
T 4aw2_A 213 HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 292 (437)
T ss_dssp CEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred CEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHh
Confidence 999999999976654332 23468999999999885 3468899999999999999999999999999999888
Q ss_pred HHhCCCCCCCC-CCCCCCHHHHHHHHHccccCcCC--CCCHHHHhcCcccccc
Q 008127 327 VLRNKPDFRRK-PWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 376 (577)
Q Consensus 327 i~~~~~~~~~~-~~~~~s~~~~~li~~~l~~dP~~--Rpt~~~il~hp~f~~~ 376 (577)
++.....+..+ .++.+|+++.+||.+||+.+|++ ||+++++++||||+..
T Consensus 293 i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 293 IMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp HHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred hhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 87643222222 23568999999999999998988 9999999999999875
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-50 Score=412.61 Aligned_cols=257 Identities=26% Similarity=0.459 Sum_probs=217.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHH-HHhcCCCCeeEEEEEEEcCCeEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL-QALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l-~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
.++|++++.||+|+||.||+|+++.+++.||||++.+...........+.+|..++ +.+ +||||++++++|.+.+.+|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~-~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCC-CCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEeCCEEE
Confidence 35799999999999999999999999999999999876554444556677787774 445 6999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 116 lv~E~~~gg~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~ 175 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRE-----------------RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQ 175 (373)
T ss_dssp EEEECCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TT
T ss_pred EEEeCCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC---CC
Confidence 999999999999877543 6789999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccC-CCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+++||+|||+++... ........+||+.|+|||++.+. ++.++|||||||++|||++|..||.+.+..+++..++...
T Consensus 176 g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~ 255 (373)
T 2r5t_A 176 GHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP 255 (373)
T ss_dssp SCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSC
T ss_pred CCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc
Confidence 899999999998643 33445677999999999998764 5889999999999999999999999999999999998876
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCH----HHHhcCcccccc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 376 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~----~~il~hp~f~~~ 376 (577)
..++ +.+++++.+||.+||+.||.+||++ .++++||||+..
T Consensus 256 ~~~~----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 256 LQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp CCCC----SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred cCCC----CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence 5543 4689999999999999999999986 699999999864
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-50 Score=405.20 Aligned_cols=268 Identities=36% Similarity=0.593 Sum_probs=219.8
Q ss_pred ccccccceeee-eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 91 DKDFDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 91 ~~~~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
...+.++|++. +.||+|+||.||+|.+..+++.||||++..... .....+.+|+.++.++.+||||+++++++...
T Consensus 7 ~~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~ 83 (316)
T 2ac3_A 7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFFEEE 83 (316)
T ss_dssp CCCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS---CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred CcccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc---hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 34567789995 789999999999999999999999999876532 24567899999999976799999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+.+|+|||||++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~ 146 (316)
T 2ac3_A 84 DRFYLVFEKMRGGSILSHIHKR-----------------RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH 146 (316)
T ss_dssp TEEEEEEECCTTCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESC
T ss_pred CEEEEEEEcCCCCcHHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEcc
Confidence 9999999999999999887543 57899999999999999999999999999999999999985
Q ss_pred CCCCCCeeEEecCCCcccCCCC--------CccccccCCccccchhccc------CCCCCCchhhHHHHHHHHHhCCCCC
Q 008127 250 AKEDSSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPF 315 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~~~~DiwSlG~il~el~tg~~Pf 315 (577)
.+....+||+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||
T Consensus 147 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf 226 (316)
T 2ac3_A 147 PNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226 (316)
T ss_dssp SSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSC
T ss_pred CCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCC
Confidence 4334459999999997653221 1234579999999999863 3588999999999999999999999
Q ss_pred CCCCh---------------hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 316 WDKTE---------------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 316 ~~~~~---------------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+... ...+..+......++...++.+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~ 304 (316)
T 2ac3_A 227 VGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP 304 (316)
T ss_dssp CCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred cccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence 77542 3456666666665554445678999999999999999999999999999999997543
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-50 Score=420.38 Aligned_cols=260 Identities=27% Similarity=0.472 Sum_probs=222.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|+++.+|+.||||++.+...........+.+|+.++..+ +||||++++++|.+.+.+|+|
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lV 139 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLYLV 139 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEEEE
Confidence 5799999999999999999999999999999999764332223345578999999998 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ...+++..++.++.||+.||.|||++|||||||||+|||++ .+++
T Consensus 140 mE~~~gg~L~~~l~~~----------------~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld---~~g~ 200 (412)
T 2vd5_A 140 MEYYVGGDLLTLLSKF----------------GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD---RCGH 200 (412)
T ss_dssp ECCCCSCBHHHHHHHH----------------SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSC
T ss_pred EcCCCCCcHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeec---CCCC
Confidence 9999999999987543 24799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhcc--------cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK--------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~--------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+||+|||+|+....... ....+||+.|+|||++. +.++.++|||||||++|||++|+.||.+.+..+.+.
T Consensus 201 vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~ 280 (412)
T 2vd5_A 201 IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG 280 (412)
T ss_dssp EEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred EEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 99999999987654332 23468999999999886 246889999999999999999999999999988888
Q ss_pred HHHhCCCCCCCC-CCCCCCHHHHHHHHHccccCcCCC---CCHHHHhcCcccccc
Q 008127 326 EVLRNKPDFRRK-PWPSISNSAKDFVKKLLVKDPRAR---LTAAQALSHPWVREG 376 (577)
Q Consensus 326 ~i~~~~~~~~~~-~~~~~s~~~~~li~~~l~~dP~~R---pt~~~il~hp~f~~~ 376 (577)
.++.....+..+ ....+|+++.+||.+||+ +|.+| |++.++++||||+..
T Consensus 281 ~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 281 KIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp HHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred HHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 887643222111 124689999999999999 99998 599999999999875
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-50 Score=416.10 Aligned_cols=263 Identities=30% Similarity=0.574 Sum_probs=216.4
Q ss_pred cccceeee-eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----
Q 008127 94 FDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED---- 168 (577)
Q Consensus 94 ~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~---- 168 (577)
+.++|.+. +.||.|+||.||+|.++.+|+.||||++... ..+.+|+.++.++.+||||++++++|..
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~ 130 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAG 130 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence 34567776 7899999999999999999999999998532 3467899988777689999999999875
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+.+|||||||+||+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~---------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~ 195 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDR---------------GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 195 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC------------------CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEES
T ss_pred CcEEEEEEEeCCCCcHHHHHHHh---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEe
Confidence 66799999999999999877432 124689999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh----HH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----GI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~----~~ 323 (577)
..+.++.+||+|||+++...........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.... ..
T Consensus 196 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 275 (400)
T 1nxk_A 196 SKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 275 (400)
T ss_dssp SSSTTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSH
T ss_pred cCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHH
Confidence 644478999999999987765555567789999999999864 5688999999999999999999999775432 35
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
...+..+...++...|..+++++.+||.+||..||.+|||+.++++||||......
T Consensus 276 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~ 331 (400)
T 1nxk_A 276 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 331 (400)
T ss_dssp HHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTTS
T ss_pred HHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCCC
Confidence 56677777777777778899999999999999999999999999999999875543
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-50 Score=402.96 Aligned_cols=258 Identities=25% Similarity=0.345 Sum_probs=212.7
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
..+.++|++.++||+|+||+||+|+++.+|+.||||++..... ..........|+..+..+.+||||++++++|...+.
T Consensus 53 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~ 131 (311)
T 3p1a_A 53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI 131 (311)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred chhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCE
Confidence 3455789999999999999999999999999999998865432 233445566777777777679999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+||||| +++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~----------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~--- 191 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAW----------------GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG--- 191 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHH----------------CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---
T ss_pred EEEEEecc-CCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---
Confidence 99999999 77888876543 35699999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
.++.+||+|||++.............||+.|+|||++.+.++.++|||||||++|+|++|..||.+.. ....+....
T Consensus 192 ~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~---~~~~~~~~~ 268 (311)
T 3p1a_A 192 PRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGE---GWQQLRQGY 268 (311)
T ss_dssp GGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHH---HHHHHTTTC
T ss_pred CCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHhccC
Confidence 47889999999998776555555668999999999999888999999999999999999987775542 223333222
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
. +...++.+++++.+||.+||+.||.+|||+.++|+||||++
T Consensus 269 ~--~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 269 L--PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp C--CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred C--CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 1 11223568899999999999999999999999999999985
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=400.10 Aligned_cols=263 Identities=27% Similarity=0.481 Sum_probs=215.3
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
..+.++|++++.||+|+||.||+|++. +|+.||||++..... .......+.+|+.+++++ +||||+++++++.+++.
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~ 93 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAE-DEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERC 93 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSC
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccc-cchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCE
Confidence 446678999999999999999999985 589999999865432 223456788999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||++ +|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 94 ~~lv~e~~~~-~l~~~~~~----------------~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~--- 153 (311)
T 3niz_A 94 LTLVFEFMEK-DLKKVLDE----------------NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN--- 153 (311)
T ss_dssp EEEEEECCSE-EHHHHHHT----------------CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---
T ss_pred EEEEEcCCCC-CHHHHHHh----------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEEC---
Confidence 9999999974 77776532 235699999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
.++.+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+.
T Consensus 154 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~ 233 (311)
T 3niz_A 154 SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF 233 (311)
T ss_dssp TTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHH
T ss_pred CCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 4788999999999876432 33445689999999998865 46889999999999999999999998887777666654
Q ss_pred hCCCCCCCC--------------------------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 329 RNKPDFRRK--------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 329 ~~~~~~~~~--------------------------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
......... ..+.+++++.+||.+||+.||.+|||+.++|+||||++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 234 SILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp HHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred HHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 421111110 1234778999999999999999999999999999999754
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-49 Score=409.94 Aligned_cols=264 Identities=33% Similarity=0.660 Sum_probs=232.6
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC-----chhhHHHHHHHHHHHHHhcCCCCeeEEEEEE
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-----LPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-----~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 166 (577)
..+.++|++.+.||.|+||.||+|+++.+|+.||||++...... .....+.+.+|+.+++++.+||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 34567899999999999999999999999999999998654311 1123566889999999996699999999999
Q ss_pred EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
...+..|+||||++|++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~-----------------~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl 232 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEK-----------------VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENIL 232 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 9999999999999999999877533 57899999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-------CCCCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
++ .++.+||+|||++..+.........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+..
T Consensus 233 ~~---~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 309 (365)
T 2y7j_A 233 LD---DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR 309 (365)
T ss_dssp EC---TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EC---CCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC
Confidence 98 478999999999988776666677899999999998853 35789999999999999999999999988
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 320 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
....+..+..+...+..+.|..++..+.+||.+||..||.+|||+.++|+||||+.
T Consensus 310 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 310 QILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred HHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 88888888887766655556788999999999999999999999999999999973
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-49 Score=410.92 Aligned_cols=262 Identities=34% Similarity=0.626 Sum_probs=225.8
Q ss_pred cccceee--eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 94 FDRRYTI--GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 94 ~~~~y~~--~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+...|.+ .+.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.+++++ +||||+++++++...+.
T Consensus 85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~ 160 (373)
T 2x4f_A 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQL-DHANLIQLYDAFESKND 160 (373)
T ss_dssp GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSE
T ss_pred cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCE
Confidence 3445665 678999999999999999999999999987653 23567789999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||++|+|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||+.. +
T Consensus 161 ~~lv~E~~~~~~L~~~l~~~----------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~ 223 (373)
T 2x4f_A 161 IVLVMEYVDGGELFDRIIDE----------------SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-R 223 (373)
T ss_dssp EEEEEECCTTCEEHHHHHHT----------------GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE-T
T ss_pred EEEEEeCCCCCcHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec-C
Confidence 99999999999999877533 245899999999999999999999999999999999999953 1
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
.++.+||+|||++............+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..++..
T Consensus 224 ~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~ 303 (373)
T 2x4f_A 224 DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILAC 303 (373)
T ss_dssp TTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT
T ss_pred CCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 3578999999999987766666667899999999988754 578999999999999999999999999998899999887
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
...+....++.+++++.+||.+||..||.+|||+.++|+||||++.
T Consensus 304 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 304 RWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp CCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred cCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 7666666677899999999999999999999999999999999864
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-49 Score=394.11 Aligned_cols=260 Identities=24% Similarity=0.427 Sum_probs=215.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|.++.+|+.||||++..... .......+.+|+.+++++ +||||+++++++.+++.+|+|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEEE
Confidence 479999999999999999999999999999999976543 233457788999999999 499999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||++ +|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 80 ~e~~~~-~l~~~~~~----------------~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~---~~~~ 139 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDS----------------CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGE 139 (292)
T ss_dssp EECCSE-EHHHHHHH----------------TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSC
T ss_pred EecCCC-CHHHHHHh----------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCC
Confidence 999965 66665532 246799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCC-CCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf-~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|..|| .+....+.+..+....
T Consensus 140 ~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~ 219 (292)
T 3o0g_A 140 LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL 219 (292)
T ss_dssp EEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHH
T ss_pred EEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHh
Confidence 999999999876432 334556899999999988653 588999999999999999987775 5556666666654421
Q ss_pred CCCCC-------------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 332 PDFRR-------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 332 ~~~~~-------------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..... ...+.+++++.+||.+||+.||++|||+.++|+||||++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 290 (292)
T 3o0g_A 220 GTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp CCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred CCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence 11111 11235788999999999999999999999999999999754
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-50 Score=423.43 Aligned_cols=258 Identities=34% Similarity=0.604 Sum_probs=228.6
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|.+++.||+|+||.||+|++..+|+.||||++.+...........+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~l 93 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIFM 93 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEE
Confidence 35799999999999999999999999999999999765332223456789999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||+||+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 94 v~E~~~gg~L~~~l~-----------------~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~---~~~ 153 (476)
T 2y94_A 94 VMEYVSGGELFDYIC-----------------KNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD---AHM 153 (476)
T ss_dssp EEECCSSEEHHHHTT-----------------SSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEC---TTC
T ss_pred EEeCCCCCcHHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEe---cCC
Confidence 999999999988663 346799999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++............+||+.|+|||++.+.. +.++|||||||++|+|++|..||.+......+..+..+..
T Consensus 154 ~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~ 233 (476)
T 2y94_A 154 NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF 233 (476)
T ss_dssp CEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCC
T ss_pred CeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCc
Confidence 89999999998876666666789999999999987653 6789999999999999999999999888888888887654
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..+ ..+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 234 ~~p----~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 274 (476)
T 2y94_A 234 YTP----QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDL 274 (476)
T ss_dssp CCC----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred CCC----ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcC
Confidence 332 45789999999999999999999999999999998754
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-49 Score=397.77 Aligned_cols=266 Identities=25% Similarity=0.357 Sum_probs=215.7
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC--chhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEc
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--LPIAVEDVKREVKILQALA--GHENVVKFYNAFED 168 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~ 168 (577)
.+.++|++.+.||+|+||.||+|++..+|+.||||++...... .......+.+|+.+++.+. +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3456899999999999999999999999999999998643211 1112345677888877764 49999999999986
Q ss_pred CC-----eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCC
Q 008127 169 DN-----YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 243 (577)
Q Consensus 169 ~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~ 243 (577)
.. .+++||||+. |+|.+++... ....+++..++.++.||+.||.|||++||+||||||+
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~---------------~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~ 149 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKA---------------PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 149 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTC---------------CTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTT
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhc---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence 54 5899999996 5998876432 2244899999999999999999999999999999999
Q ss_pred cEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 244 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 244 NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
|||++ .++.+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+
T Consensus 150 Nil~~---~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 226 (308)
T 3g33_A 150 NILVT---SGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226 (308)
T ss_dssp TEEEC---TTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH
T ss_pred HEEEc---CCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99998 478899999999988766666677899999999998854 56899999999999999999999999998888
Q ss_pred HHHHHHhCCCCCCCCC-----------------------CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 323 IFKEVLRNKPDFRRKP-----------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~-----------------------~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+..+.......+... .+.+++++.+||.+||+.||.+|||+.++|+||||+...
T Consensus 227 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 227 QLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp HHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred HHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 8777755322111111 235788999999999999999999999999999999754
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=401.98 Aligned_cols=267 Identities=36% Similarity=0.616 Sum_probs=231.2
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch---hhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~---~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.+.++|++.+.||+|+||.||+|++..+|+.||||++........ ...+.+.+|+.+++.+. ||||+++++++...
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 87 (321)
T 2a2a_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVITLHDVYENR 87 (321)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECS
T ss_pred hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCC-CCCcceEEEEEecC
Confidence 356789999999999999999999999999999999876543211 23677999999999995 99999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+.+|+||||+++++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~-----------------~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~ 150 (321)
T 2a2a_A 88 TDVVLILELVSGGELFDFLA-----------------QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150 (321)
T ss_dssp SEEEEEECCCCSCBHHHHHH-----------------TCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESC
T ss_pred CEEEEEEEcCCCCcHHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEec
Confidence 99999999999999988764 2367899999999999999999999999999999999999984
Q ss_pred CCC-CCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 250 AKE-DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 250 ~~~-~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.+. ...+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+
T Consensus 151 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i 230 (321)
T 2a2a_A 151 KNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230 (321)
T ss_dssp TTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH
T ss_pred CCCCcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 211 12799999999988766655667789999999998875 4588999999999999999999999999888888888
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
......++...++.+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~ 280 (321)
T 2a2a_A 231 TSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280 (321)
T ss_dssp HTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred HhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence 87665554444467889999999999999999999999999999998643
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-49 Score=397.32 Aligned_cols=256 Identities=29% Similarity=0.568 Sum_probs=215.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc-----------------------hhhHHHHHHHHHHHHH
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-----------------------PIAVEDVKREVKILQA 152 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~-----------------------~~~~~~~~~E~~~l~~ 152 (577)
++|++.+.||+|+||.||+|++..+|+.||||++....... ....+.+.+|+.++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999987653211 1123568899999999
Q ss_pred hcCCCCeeEEEEEEEc--CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q 008127 153 LAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 230 (577)
Q Consensus 153 l~~hpniv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~L 230 (577)
+ +||||+++++++.. .+.+|+||||+++++|.+.+ ....+++..++.++.||+.||.||
T Consensus 93 l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~------------------~~~~~~~~~~~~~~~qi~~~l~~l 153 (298)
T 2zv2_A 93 L-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP------------------TLKPLSEDQARFYFQDLIKGIEYL 153 (298)
T ss_dssp C-CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS------------------CSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh------------------hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 9 59999999999986 67899999999999987632 346799999999999999999999
Q ss_pred HhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCC-CccccccCCccccchhcccCC----CCCCchhhHHHHH
Q 008127 231 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVIT 305 (577)
Q Consensus 231 H~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~DiwSlG~il 305 (577)
|++||+||||||+|||++ .++.+||+|||++....... .....+||+.|+|||++.+.. +.++|||||||++
T Consensus 154 H~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l 230 (298)
T 2zv2_A 154 HYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230 (298)
T ss_dssp HHTTEECCCCCGGGEEEC---TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHH
T ss_pred HHCCeeccCCCHHHEEEC---CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHH
Confidence 999999999999999998 47889999999998765432 234568999999999987543 5678999999999
Q ss_pred HHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 306 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 306 ~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
|+|++|+.||.+.........+......++. .+.+++++.+||.+||..||.+|||+.++++||||+.
T Consensus 231 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~ 298 (298)
T 2zv2_A 231 YCFVFGQCPFMDERIMCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298 (298)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred HHHHHCCCCCCCccHHHHHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence 9999999999988887777777766554432 3578999999999999999999999999999999963
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-49 Score=404.34 Aligned_cols=260 Identities=28% Similarity=0.447 Sum_probs=223.8
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.....+|.+.+.||+|+||.||+|++..+|+.||||++...........+.+.+|+.+++++ +||||+++++++..++.
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~ 128 (348)
T 1u5q_A 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHT 128 (348)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred cchhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCe
Confidence 34556799999999999999999999999999999999765444445567889999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.|+|||||. |+|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 129 ~~lv~e~~~-g~l~~~l~~~----------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~--- 188 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEVH----------------KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS--- 188 (348)
T ss_dssp EEEEEECCS-EEHHHHHHHH----------------TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---
T ss_pred EEEEEecCC-CCHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---
Confidence 999999997 6787766432 36789999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.++.+||+|||++..... ....+||+.|+|||++. +.++.++|||||||++|+|++|+.||.+.+.......+
T Consensus 189 ~~~~~kL~DfG~a~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~ 265 (348)
T 1u5q_A 189 EPGLVKLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 265 (348)
T ss_dssp TTTEEEECCCTTCBSSSS---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred CCCCEEEeeccCceecCC---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 478999999999987643 23568999999999874 45688999999999999999999999988877777777
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
........ ....+++.+.+||.+||..||.+|||+.++++||||....
T Consensus 266 ~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~ 313 (348)
T 1u5q_A 266 AQNESPAL--QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 313 (348)
T ss_dssp HHSCCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred HhcCCCCC--CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence 66543222 2246789999999999999999999999999999998654
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=391.72 Aligned_cols=265 Identities=32% Similarity=0.621 Sum_probs=233.9
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC------chhhHHHHHHHHHHHHHhcCCCCeeEEEEEE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI------LPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~------~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 166 (577)
.+.++|++.+.||+|+||.||+|.++.+|+.||||++...... .....+.+.+|+.+++++.+||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 3557899999999999999999999999999999998654311 1123567889999999997799999999999
Q ss_pred EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
...+.+|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil 156 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK-----------------VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL 156 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEE
Confidence 9999999999999999999887543 57899999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcc-------cCCCCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-------RKSGPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
++ .++.+||+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|..||.+..
T Consensus 157 ~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 233 (298)
T 1phk_A 157 LD---DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233 (298)
T ss_dssp EC---TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Ec---CCCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence 98 47889999999998876666666778999999999874 235788999999999999999999999988
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 320 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.......+......+....++.++..+.+||.+||..||.+|||+.++++||||++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 234 QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp HHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred HHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 8888888888877776666678999999999999999999999999999999998754
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=414.35 Aligned_cols=262 Identities=33% Similarity=0.501 Sum_probs=208.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC--
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-- 170 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-- 170 (577)
.+.++|++++.||+|+||.||+|.++.+|+.||||++.... ........+.+|+.+++.+.+||||+++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc-cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 45568999999999999999999999999999999986542 234456778899999999977999999999997544
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+|||||+ |+|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~------------------~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~-- 143 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRA------------------NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLN-- 143 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHH------------------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC--
T ss_pred EEEEEecccC-cCHHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEc--
Confidence 7999999997 588776532 4689999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCC----------------------CCCccccccCCccccchhccc--CCCCCCchhhHHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKP----------------------GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITY 306 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~----------------------~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~ 306 (577)
.++.+||+|||+|+.... .......+||+.|+|||++.+ .++.++|||||||++|
T Consensus 144 -~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ 222 (388)
T 3oz6_A 144 -AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILG 222 (388)
T ss_dssp -TTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred -CCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHH
Confidence 478999999999976532 112345689999999998865 4688999999999999
Q ss_pred HHHhCCCCCCCCChhHHHHHHHhCCCCCC------------------------------C-------------CCCCCCC
Q 008127 307 ILLCGRRPFWDKTEDGIFKEVLRNKPDFR------------------------------R-------------KPWPSIS 343 (577)
Q Consensus 307 el~tg~~Pf~~~~~~~~~~~i~~~~~~~~------------------------------~-------------~~~~~~s 343 (577)
+|++|++||.+.+..+.+..++....... . ..+..++
T Consensus 223 ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (388)
T 3oz6_A 223 EILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCN 302 (388)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCC
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCC
Confidence 99999999999888777776653111000 0 0122678
Q ss_pred HHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 344 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 344 ~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
+++.+||.+||+.||.+|||+.++|+||||+...
T Consensus 303 ~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~ 336 (388)
T 3oz6_A 303 EEALDLLDKLLQFNPNKRISANDALKHPFVSIFH 336 (388)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred HHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhc
Confidence 9999999999999999999999999999998654
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-49 Score=393.28 Aligned_cols=265 Identities=41% Similarity=0.726 Sum_probs=235.8
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+.++|++++.||+|+||.||+|.+..+++.||||++...... ......+.+|+.+++++ +||||+++++++...+.+|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCeEE
Confidence 446899999999999999999999999999999998654332 23467789999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+++++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+||+++..+.+
T Consensus 98 lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~ 160 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR-----------------KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKD 160 (287)
T ss_dssp EEECCCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTT
T ss_pred EEEEccCCCCHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCc
Confidence 999999999998877543 568999999999999999999999999999999999999865456
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
..+||+|||++.............||+.|+|||++.+.++.++|||||||++|+|++|..||.+.+..+....+..+...
T Consensus 161 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 240 (287)
T 2wei_A 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA 240 (287)
T ss_dssp CCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred ccEEEeccCcceeecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Confidence 68999999999877655555666799999999999888899999999999999999999999999888888888887766
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
+....+..+++++.+||.+||..||.+|||+.++|+||||++..
T Consensus 241 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 284 (287)
T 2wei_A 241 FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (287)
T ss_dssp CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence 66556678899999999999999999999999999999998753
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=393.48 Aligned_cols=264 Identities=40% Similarity=0.731 Sum_probs=230.4
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.++|.+.+.||+|+||.||+|++..+|+.||||++..... .....+.+|+.+++.+ +||||+++++++...+.+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 81 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHY 81 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEE
Confidence 355689999999999999999999999999999999875432 2345688999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+...+.
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~ 144 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILER-----------------GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEE 144 (304)
T ss_dssp EEEECCCCSCBHHHHHHHH-----------------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSST
T ss_pred EEEEEcCCCccHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCC
Confidence 9999999999999877543 57899999999999999999999999999999999999954346
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
++.+||+|||++...... .....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.........+..+.
T Consensus 145 ~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~ 223 (304)
T 2jam_A 145 NSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGY 223 (304)
T ss_dssp TCCEEBCSCSTTCCCCCB-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCC
T ss_pred CCCEEEccCCcceecCCC-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC
Confidence 789999999999765432 33456799999999998754 5889999999999999999999999998888888888887
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
..+....++.+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (304)
T 2jam_A 224 YEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTA 270 (304)
T ss_dssp CCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred CCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCCc
Confidence 77766667789999999999999999999999999999999987543
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-49 Score=420.20 Aligned_cols=257 Identities=29% Similarity=0.512 Sum_probs=216.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++++.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.+. ||||++++++|...+.+|+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCS-CTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCC-CCeEeeEEEEEeeCCEEEE
Confidence 357999999999999999999999999999999997653333344567789999999984 9999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~ 253 (577)
|||||++|+|.+++... ..+++..++.++.||+.||.|||+ .|||||||||+|||++ .+
T Consensus 226 v~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~---~~ 285 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRE-----------------RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KD 285 (446)
T ss_dssp EECCCSSCBHHHHHHHH-----------------SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEEC---SS
T ss_pred EEeeCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEEC---CC
Confidence 99999999998877543 678999999999999999999998 9999999999999998 47
Q ss_pred CCeeEEecCCCcccC-CCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+.+||+|||+|+... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+....
T Consensus 286 ~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~ 365 (446)
T 4ejn_A 286 GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 365 (446)
T ss_dssp SCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC
T ss_pred CCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCC
Confidence 899999999998643 2334456789999999998865 46889999999999999999999999999988888888876
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
..++ ..+++++.+||.+||..||.+|| |+.++++||||+..
T Consensus 366 ~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 366 IRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp CCCC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred CCCC----ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 6544 45889999999999999999999 99999999999874
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=397.52 Aligned_cols=257 Identities=27% Similarity=0.511 Sum_probs=213.6
Q ss_pred ccceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.++|++.+.||+|+||.||+|++. .+|+.||||++.+.... .......+.+|+.+++.+. ||||+++++++...+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFIVDLIYAFQTGG 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCC-CTTBCCEEEEEECSS
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCC-CCCccceeEEEEcCC
Confidence 357999999999999999999985 68999999999765321 1224456789999999994 999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~-- 155 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLERE-----------------GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN-- 155 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC--
T ss_pred EEEEEEeCCCCCcHHHHHHhC-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEEC--
Confidence 999999999999999877543 5689999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
.++.+||+|||+++.... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+.
T Consensus 156 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~ 234 (327)
T 3a62_A 156 -HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234 (327)
T ss_dssp -TTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred -CCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 478999999999976432 233456789999999998865 46889999999999999999999999999888888888
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
.....++ +.+++++.+||.+||..||.+|| ++.++++||||+..
T Consensus 235 ~~~~~~p----~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 235 KCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp HTCCCCC----TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred hCCCCCC----CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 8765543 45889999999999999999999 89999999999864
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-49 Score=397.94 Aligned_cols=266 Identities=26% Similarity=0.426 Sum_probs=207.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++++.||+|+||.||+|.++.+|+.||||++..... ......+.+|+.+++++ +||||+++++++..++.+|+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCST--TCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc--cccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEEE
Confidence 479999999999999999999999999999999875432 22345688999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+ |+|.+++..... ......+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 82 ~e~~~-~~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~ 146 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTV-----------GNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN---KRGQ 146 (317)
T ss_dssp EECCC-CBHHHHHHHHHS-----------SSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCC
T ss_pred EEecC-CCHHHHHHhccc-----------cccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc---CCCC
Confidence 99997 589887754411 11224689999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 147 ~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~ 226 (317)
T 2pmi_A 147 LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMG 226 (317)
T ss_dssp EEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred EEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 999999999876432 33455689999999999865 468899999999999999999999999888777776654211
Q ss_pred CCCC------------------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 333 DFRR------------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 333 ~~~~------------------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
.... .....++.++.+||.+||+.||.+|||+.++|+||||++....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 303 (317)
T 2pmi_A 227 TPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHH 303 (317)
T ss_dssp SCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred CCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccch
Confidence 1000 0112478899999999999999999999999999999986543
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-49 Score=405.00 Aligned_cols=265 Identities=23% Similarity=0.350 Sum_probs=219.7
Q ss_pred CccccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc----CCCCeeEEE
Q 008127 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA----GHENVVKFY 163 (577)
Q Consensus 88 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~----~hpniv~~~ 163 (577)
+.....+.++|++++.||+|+||.||+|++..+++.||||++... ......+..|+.+++.+. +||||++++
T Consensus 27 ~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp CCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 334455778999999999999999999999999999999998643 235567788999999985 499999999
Q ss_pred EEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCC
Q 008127 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 243 (577)
Q Consensus 164 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~ 243 (577)
+++...+.+|+||||+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~ 166 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITRN---------------NYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPE 166 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHHT---------------TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcc
Confidence 9999999999999999 99999887543 2346899999999999999999999999999999999
Q ss_pred cEEeecC----------------------CCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhh
Q 008127 244 NFLFKSA----------------------KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWS 300 (577)
Q Consensus 244 NILl~~~----------------------~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwS 300 (577)
|||++.. ..++.+||+|||+|..... .....+||+.|+|||++.+ .++.++||||
T Consensus 167 NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 244 (360)
T 3llt_A 167 NILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILNLGWDVSSDMWS 244 (360)
T ss_dssp GEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTTCCCCTTHHHHH
T ss_pred cEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHcCCCCCCccchHH
Confidence 9999731 1267899999999986543 2345689999999998865 5689999999
Q ss_pred HHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC---------------------CCCC-------------------
Q 008127 301 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR---------------------KPWP------------------- 340 (577)
Q Consensus 301 lG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~---------------------~~~~------------------- 340 (577)
|||++|+|++|+.||.+....+.+..+.......+. ..|+
T Consensus 245 lG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 324 (360)
T 3llt_A 245 FGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLY 324 (360)
T ss_dssp HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhccccc
Confidence 999999999999999988877766655443222110 0011
Q ss_pred --CCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 341 --SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 341 --~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
..++.+.+||.+||+.||.+|||+.++|+||||+
T Consensus 325 ~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 325 KIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred ccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 1236788999999999999999999999999996
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=418.40 Aligned_cols=266 Identities=36% Similarity=0.634 Sum_probs=215.3
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc-----hhhHHHHHHHHHHHHHhcCCCCeeEEEEEE
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-----PIAVEDVKREVKILQALAGHENVVKFYNAF 166 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~-----~~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 166 (577)
..+.++|.+.+.||+|+||.||+|.++.+++.||||++.+..... ......+.+|+.+|+++ +||||+++++++
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~ 209 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFF 209 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence 446678999999999999999999999999999999987653221 11223578999999999 599999999998
Q ss_pred EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
.. +.+|+|||||++|+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 210 ~~-~~~~lv~e~~~~g~L~~~l~-----------------~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIl 271 (419)
T 3i6u_A 210 DA-EDYYIVLELMEGGELFDKVV-----------------GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVL 271 (419)
T ss_dssp ES-SEEEEEEECCTTCBGGGGTS-----------------SSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred ec-CceEEEEEcCCCCcHHHHHh-----------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEE
Confidence 65 45899999999999987552 3467999999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChh-
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTED- 321 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~- 321 (577)
++..+.+..+||+|||+|+...........+||+.|+|||++. ..++.++|||||||++|+|++|..||.+....
T Consensus 272 l~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~ 351 (419)
T 3i6u_A 272 LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 351 (419)
T ss_dssp ESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC
T ss_pred EecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH
Confidence 9865556679999999999876655566788999999999875 34567899999999999999999999765443
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 322 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.....+..+...+....|+.+++.+.+||.+||..||.+|||+.++|+||||++.
T Consensus 352 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 352 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp CHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred HHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 4455555555555444556789999999999999999999999999999999863
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-49 Score=427.18 Aligned_cols=259 Identities=26% Similarity=0.460 Sum_probs=224.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++.+.||+|+||.||+|+++.+|+.||||++.+...........+.+|+.+|+.+ +||||+++++++.+.+.+|+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEEE
Confidence 35799999999999999999999999999999999765433333456788999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||+||+|.+++... ....+++..++.++.||+.||.|||++|||||||||+|||++ .++
T Consensus 262 VmEy~~gg~L~~~l~~~---------------~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld---~~g 323 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHM---------------GQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD---DHG 323 (576)
T ss_dssp EECCCCSCBHHHHHHSS---------------SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTS
T ss_pred EEEcCCCCcHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEe---CCC
Confidence 99999999998876422 234599999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCC----hhHHHHHHHh
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLR 329 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~----~~~~~~~i~~ 329 (577)
.+||+|||+|............+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. ...+...+..
T Consensus 324 ~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~ 403 (576)
T 2acx_A 324 HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403 (576)
T ss_dssp CEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH
T ss_pred CeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc
Confidence 999999999988766666667799999999999876 46889999999999999999999998753 3445555655
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
....++ ..+|+++.+||.+||+.||.+|| ++.++++||||+..
T Consensus 404 ~~~~~p----~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 404 VPEEYS----ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp CCCCCC----TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred ccccCC----ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 444333 46899999999999999999999 89999999999864
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-49 Score=400.16 Aligned_cols=259 Identities=33% Similarity=0.588 Sum_probs=215.9
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+.++|++++.||+|+||.||+|++..+++.||||++..... ....+.+.+|+.+++.+ +||||+++++++...+..|
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~ 81 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY 81 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEE
Confidence 45689999999999999999999999999999999865432 12346688999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|||||++|+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 82 lv~e~~~~~~L~~~l~-----------------~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~ 141 (323)
T 3tki_A 82 LFLEYCSGGELFDRIE-----------------PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ER 141 (323)
T ss_dssp EEEECCTTEEGGGGSB-----------------TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TT
T ss_pred EEEEcCCCCcHHHHHh-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEe---CC
Confidence 9999999999987552 346799999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCC---CCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhH-HHHHH
Q 008127 254 SSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEV 327 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~-~~~~i 327 (577)
+.+||+|||++...... ......+||+.|+|||++.+.. +.++|||||||++|+|++|+.||.+..... .+...
T Consensus 142 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~ 221 (323)
T 3tki_A 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221 (323)
T ss_dssp CCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHH
T ss_pred CCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH
Confidence 88999999999765322 2234678999999999987543 668999999999999999999998765543 33333
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..... ....+..+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 222 ~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 222 KEKKT--YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp HTTCT--TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred hcccc--cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 33222 2234567899999999999999999999999999999998754
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-49 Score=388.53 Aligned_cols=258 Identities=29% Similarity=0.577 Sum_probs=222.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+..++..||||++.............+.+|+.+++.+. ||||+++++++.+.+.+++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCC-CCCCcchhheEecCCEEEEE
Confidence 57999999999999999999999999999999986543322334567899999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 88 ~e~~~~~~l~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~---~~~~ 147 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-----------------SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGE 147 (279)
T ss_dssp ECCCTTEEHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEEC---TTSC
T ss_pred EecCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEc---CCCC
Confidence 9999999999877543 5689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||++...... ......||+.|+|||++.+. ++.++||||||+++|+|++|..||......+....+......+
T Consensus 148 ~~l~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 226 (279)
T 3fdn_A 148 LKIADFGWSVHAPSS-RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226 (279)
T ss_dssp EEECSCCEESCC---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC
T ss_pred EEEEeccccccCCcc-cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCC
Confidence 999999998765432 23456899999999988765 4789999999999999999999999988888888887765544
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
+ ..+++.+.+||.+||..||.+|||+.++++||||+.....
T Consensus 227 ~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~~ 267 (279)
T 3fdn_A 227 P----DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 267 (279)
T ss_dssp C----TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCSS
T ss_pred C----CcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCccC
Confidence 3 4578999999999999999999999999999999976543
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-49 Score=392.53 Aligned_cols=258 Identities=28% Similarity=0.448 Sum_probs=210.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|++ .+|+.||||++...... ......+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 78 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKED-EGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLV 78 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccc-cccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEE
Confidence 4799999999999999999998 67999999998654321 22346688999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++ +|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 79 ~e~~~~-~l~~~~~~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~ 138 (288)
T 1ob3_A 79 FEHLDQ-DLKKLLDV----------------CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN---REGE 138 (288)
T ss_dssp EECCSE-EHHHHHHT----------------STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSC
T ss_pred EEecCC-CHHHHHHh----------------cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCC
Confidence 999975 88776532 236789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 139 ~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 218 (288)
T 1ob3_A 139 LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILG 218 (288)
T ss_dssp EEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred EEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHC
Confidence 999999999765432 23345689999999998864 368899999999999999999999998887777666654211
Q ss_pred CCCC-------------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 333 DFRR-------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 333 ~~~~-------------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.... ..++.+++++.+||.+||..||.+|||+.++|+||||++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 219 TPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287 (288)
T ss_dssp CCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred CCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 0000 0123578999999999999999999999999999999863
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-49 Score=412.57 Aligned_cols=260 Identities=28% Similarity=0.429 Sum_probs=211.4
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 170 (577)
...+|++.+.||+|+||.||+|++..++. ||+|++...... ..+|+.+++.+ +||||++++++|...+
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~-------~~~E~~il~~l-~h~niv~l~~~~~~~~~~~ 108 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF-------KNRELQIMRIV-KHPNVVDLKAFFYSNGDKK 108 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS-------CCHHHHHHHTC-CCTTBCCEEEEEEEESSSS
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch-------HHHHHHHHHhC-CCCCcceEEEEEEecCCCC
Confidence 45689999999999999999999877765 888887554321 23699999999 5999999999985433
Q ss_pred ---eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 171 ---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
.+|+|||||++ ++...+... ......+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 109 ~~~~~~lv~e~~~~-~l~~~~~~~-------------~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill 174 (394)
T 4e7w_A 109 DEVFLNLVLEYVPE-TVYRASRHY-------------AKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL 174 (394)
T ss_dssp SCEEEEEEEECCSE-EHHHHHHHH-------------HHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CceEEEEEeeccCc-cHHHHHHHH-------------HhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEE
Confidence 48899999976 444433221 1235679999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+. .++.+||+|||+|+...........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+.
T Consensus 175 ~~--~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~ 252 (394)
T 4e7w_A 175 DP--PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV 252 (394)
T ss_dssp ET--TTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred cC--CCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 83 477899999999988766665667789999999998865 46899999999999999999999999988777766
Q ss_pred HHHhCC-----------------CCCC---CC-----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNK-----------------PDFR---RK-----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~-----------------~~~~---~~-----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.++... ..++ .. ..+.+++++.+||.+||+.||.+|||+.++++||||++...
T Consensus 253 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 253 EIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp HHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred HHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 665411 0011 00 12347899999999999999999999999999999997654
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=403.16 Aligned_cols=263 Identities=26% Similarity=0.416 Sum_probs=212.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEEE
Confidence 479999999999999999999999999999999865431 11122345799999999 499999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++ |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 79 ~e~~~-~~l~~~~~~~----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~ 138 (324)
T 3mtl_A 79 FEYLD-KDLKQYLDDC----------------GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGE 138 (324)
T ss_dssp EECCS-EEHHHHHHHT----------------TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC---TTCC
T ss_pred ecccc-cCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC---CCCC
Confidence 99996 5888776432 35689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 139 ~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~ 218 (324)
T 3mtl_A 139 LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILG 218 (324)
T ss_dssp EEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred EEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 999999999765432 23445689999999998865 458899999999999999999999999888877776655322
Q ss_pred CCCCCC--------------------------CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCC
Q 008127 333 DFRRKP--------------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381 (577)
Q Consensus 333 ~~~~~~--------------------------~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~ 381 (577)
...... ++.+++++.+||.+||+.||.+|||+.++|+||||+.......
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~ 293 (324)
T 3mtl_A 219 TPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIH 293 (324)
T ss_dssp CCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTS
T ss_pred CCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccccc
Confidence 111111 2347889999999999999999999999999999998765443
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-49 Score=419.08 Aligned_cols=261 Identities=29% Similarity=0.438 Sum_probs=197.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 168 (577)
+.++|++++.||+|+||.||+|+++.+|+.||||++.... ......+.+.+|+.+|+.+ +||||+++++++..
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 128 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-EDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEK 128 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTT
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh-cCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCccc
Confidence 4568999999999999999999999999999999986542 2344567889999999999 59999999999843
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...+|+||||+ +|+|.+.+. ....+++..++.++.||+.||.|||++|||||||||+||||+
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~-----------------~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~ 190 (458)
T 3rp9_A 129 FDELYVVLEIA-DSDFKKLFR-----------------TPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN 190 (458)
T ss_dssp CCCEEEEECCC-SEEHHHHHH-----------------SSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC
T ss_pred CceEEEEEecc-ccchhhhcc-----------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEEC
Confidence 35799999998 578877653 346799999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCC----------------------------CccccccCCccccchhc-c-cCCCCCCch
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGK----------------------------KFQDIVGSAYYVAPEVL-K-RKSGPESDV 298 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~----------------------------~~~~~~gt~~y~aPE~~-~-~~~~~~~Di 298 (577)
.++.+||+|||+|+...... .....+||++|+|||++ . ..++.++||
T Consensus 191 ---~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~Di 267 (458)
T 3rp9_A 191 ---QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDV 267 (458)
T ss_dssp ---TTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHH
T ss_pred ---CCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHH
Confidence 47899999999998754221 23456899999999976 3 347899999
Q ss_pred hhHHHHHHHHHh-----------CCCCCCCCCh--------------------hHHHHHHH-------------------
Q 008127 299 WSIGVITYILLC-----------GRRPFWDKTE--------------------DGIFKEVL------------------- 328 (577)
Q Consensus 299 wSlG~il~el~t-----------g~~Pf~~~~~--------------------~~~~~~i~------------------- 328 (577)
||||||+|||++ |++||.+... .+.+..+.
T Consensus 268 wSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~ 347 (458)
T 3rp9_A 268 WSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDA 347 (458)
T ss_dssp HHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHH
T ss_pred HHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHH
Confidence 999999999999 7777766431 11111111
Q ss_pred ----hCCCCC----CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 329 ----RNKPDF----RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 329 ----~~~~~~----~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
...+.. ....++.+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~ 404 (458)
T 3rp9_A 348 KRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR 404 (458)
T ss_dssp HHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence 111100 1112466799999999999999999999999999999999764
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-49 Score=434.60 Aligned_cols=257 Identities=25% Similarity=0.438 Sum_probs=229.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|++++.||+|+||.||+|+++.+++.||||++.+.........+.+..|..++..+.+||+|+.+++++.+.+.+|||
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 57999999999999999999999999999999997653322334567889999999887899999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||++||+|.+++... ..+++..++.++.||+.||.|||++|||||||||+||||+ .+++
T Consensus 421 ~E~~~gg~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~---~~g~ 480 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQV-----------------GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGH 480 (674)
T ss_dssp EECCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEEC---SSSC
T ss_pred EeCcCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEc---CCCc
Confidence 9999999999887543 6799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCccc-CCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~-~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||+|+.. .........+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+..+++..++.....
T Consensus 481 ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~ 560 (674)
T 3pfq_A 481 IKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA 560 (674)
T ss_dssp EEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCC
T ss_pred EEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Confidence 999999999863 33344567899999999998875 4689999999999999999999999999999999999988766
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCH-----HHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~-----~~il~hp~f~~~ 376 (577)
++ ..+++++.+||.+||+.||.+||++ .+|++||||+..
T Consensus 561 ~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 561 YP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp CC----TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred CC----ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 55 4689999999999999999999997 999999999874
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=406.36 Aligned_cols=263 Identities=22% Similarity=0.308 Sum_probs=215.7
Q ss_pred cceeeeeeeccc--CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 96 RRYTIGKLLGHG--QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G--~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
++|++++.||+| +||.||+|+++.+|+.||||++..... .......+.+|+.+++.+ +|||||++++++...+.+|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEEE
Confidence 479999999999 999999999999999999999976543 234567889999999999 4999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|||||++|+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 103 lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~---~~ 164 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTH---------------FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VD 164 (389)
T ss_dssp EEEECCTTCBHHHHHHHT---------------CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TT
T ss_pred EEEEccCCCCHHHHHhhh---------------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CC
Confidence 999999999999877543 235689999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCC--------CCccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 254 SSLKATDFGLSDFIKPG--------KKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~--------~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
+.+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.....
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 244 (389)
T 3gni_B 165 GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 244 (389)
T ss_dssp CCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT
T ss_pred CCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 89999999988643211 11223579999999999875 46889999999999999999999998876655
Q ss_pred HHHHHHhCCCCC------------------------------------------CCCCCCCCCHHHHHHHHHccccCcCC
Q 008127 323 IFKEVLRNKPDF------------------------------------------RRKPWPSISNSAKDFVKKLLVKDPRA 360 (577)
Q Consensus 323 ~~~~i~~~~~~~------------------------------------------~~~~~~~~s~~~~~li~~~l~~dP~~ 360 (577)
.+..++.+.... ....+..+++++.+||.+||+.||.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 324 (389)
T 3gni_B 245 MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDA 324 (389)
T ss_dssp HHHHC--------------------------------------------------------CCHHHHHHHHHHTCSCTTT
T ss_pred HHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCccc
Confidence 554433221110 00123457889999999999999999
Q ss_pred CCCHHHHhcCccccccCC
Q 008127 361 RLTAAQALSHPWVREGGD 378 (577)
Q Consensus 361 Rpt~~~il~hp~f~~~~~ 378 (577)
|||+.++|+||||+....
T Consensus 325 Rpta~ell~hp~f~~~~~ 342 (389)
T 3gni_B 325 RPSASTLLNHSFFKQIKR 342 (389)
T ss_dssp SCCHHHHTTSGGGGGC--
T ss_pred CCCHHHHhcCHHHHHHhh
Confidence 999999999999997653
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-49 Score=416.78 Aligned_cols=258 Identities=28% Similarity=0.460 Sum_probs=208.6
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++++.||+|+||.||+|++..+|+.||||++.... ........+.+|+.+++.+ +||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 137 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLE 137 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTT
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccc
Confidence 4568999999999999999999999999999999997542 2344567789999999999 599999999999654
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|+|||||++ +|.+.+ ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 138 ~~~~~~lv~E~~~~-~l~~~~-------------------~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll 197 (464)
T 3ttj_A 138 EFQDVYLVMELMDA-NLCQVI-------------------QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197 (464)
T ss_dssp TCCEEEEEEECCSE-EHHHHH-------------------TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred cCCeEEEEEeCCCC-CHHHHH-------------------hhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE
Confidence 468999999975 455543 1458999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ .++.+||+|||+|+...........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..
T Consensus 198 ~---~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~ 274 (464)
T 3ttj_A 198 K---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274 (464)
T ss_dssp C---TTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred e---CCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 8 478999999999988766656677899999999998765 568899999999999999999999999887777666
Q ss_pred HHhCC----------------------CCCCCCCCC----C------------CCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 327 VLRNK----------------------PDFRRKPWP----S------------ISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 327 i~~~~----------------------~~~~~~~~~----~------------~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
++... +.+....++ . .++++.+||.+||..||.+|||+.++|
T Consensus 275 i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L 354 (464)
T 3ttj_A 275 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354 (464)
T ss_dssp HHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred HHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 64421 111111100 0 146789999999999999999999999
Q ss_pred cCcccccc
Q 008127 369 SHPWVREG 376 (577)
Q Consensus 369 ~hp~f~~~ 376 (577)
+||||+..
T Consensus 355 ~Hp~~~~~ 362 (464)
T 3ttj_A 355 QHPYINVW 362 (464)
T ss_dssp TSTTTGGG
T ss_pred cChhhhhc
Confidence 99999864
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-49 Score=398.64 Aligned_cols=263 Identities=25% Similarity=0.403 Sum_probs=210.1
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
..++|++++.||+|+||.||+|++..+|+.||||++..... .......+.+|+.+++++ +||||+++++++...+.+|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGC-CCTTBCCEEEEEEETTEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEEE
Confidence 34589999999999999999999999999999999875532 223455678999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC--
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-- 251 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~-- 251 (577)
+|||||+ |+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 110 lv~e~~~-~~L~~~~~~-----------------~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~ 171 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDK-----------------NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDAS 171 (329)
T ss_dssp EEEECCS-EEHHHHHHH-----------------CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC----
T ss_pred EEEecCC-CCHHHHHhh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCC
Confidence 9999997 588887643 35689999999999999999999999999999999999996321
Q ss_pred CCCCeeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
..+.+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+.
T Consensus 172 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~ 251 (329)
T 3gbz_A 172 ETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIF 251 (329)
T ss_dssp -CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred ccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHH
Confidence 3456999999999765432 33445688999999998865 35899999999999999999999999988877777765
Q ss_pred hCCCCCCCCCCC--------------------------CCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWP--------------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~--------------------------~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
..........|+ .+++++.+||.+||+.||.+|||+.++|+||||+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 252 EVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp HHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred HHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence 432111111111 167899999999999999999999999999999875
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-49 Score=403.38 Aligned_cols=285 Identities=33% Similarity=0.583 Sum_probs=228.1
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc--CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
..+.++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+.+|+.+++++ +||||+++++++.+.
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccC
Confidence 3466789999999999999999999999999999999865422 1234567899999999999 599999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhh--------------hhhHHH---------hhhcCCCCCHHHHHHHHHHHHHH
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTL--------------TSAWFL---------AIRKDSRYTEKDAAVVVRQMLRV 226 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~--------------~~~~~~---------~~~~~~~l~~~~~~~i~~qil~~ 226 (577)
+.+|+|||||+||+|.+.+......... ...... .......+++..++.++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999998876311000000 000000 00001234678889999999999
Q ss_pred HHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCC-----CccccccCCccccchhccc---CCCCCCch
Q 008127 227 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR---KSGPESDV 298 (577)
Q Consensus 227 l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~Di 298 (577)
|.|||++||+||||||+|||++. +....+||+|||++....... ......||+.|+|||++.+ .++.++||
T Consensus 181 l~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di 259 (345)
T 3hko_A 181 LHYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259 (345)
T ss_dssp HHHHHHTTEECCCCCGGGEEESC-SSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHH
T ss_pred HHHHHHCCccccCCChhhEEEec-CCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHH
Confidence 99999999999999999999974 123489999999998653211 2345689999999998863 46889999
Q ss_pred hhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 299 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 299 wSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
|||||++|+|++|+.||.+....+....+......+....+..+++.+.+||.+||..||.+|||+.++|+||||++...
T Consensus 260 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~ 339 (345)
T 3hko_A 260 WSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339 (345)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred HHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence 99999999999999999999999999999888777776666678999999999999999999999999999999998653
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-48 Score=387.53 Aligned_cols=265 Identities=36% Similarity=0.651 Sum_probs=225.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc---hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~---~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.++|++.+.||+|+||.||+|++..+|+.||||++....... ....+.+.+|+.+++++. ||||+++++++...+.
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLHDIFENKTD 82 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCC-CCCeeehhheecCCCe
Confidence 457999999999999999999999999999999987653321 123677999999999995 9999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++..+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~ 145 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAEK-----------------ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN 145 (283)
T ss_dssp EEEEEECCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS
T ss_pred EEEEEeecCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCC
Confidence 99999999999999877543 5689999999999999999999999999999999999998422
Q ss_pred -CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 252 -EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 252 -~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
.+..+||+|||++.............||+.|+|||++.+ .++.++||||||+++|+|++|..||.+....+....+..
T Consensus 146 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 225 (283)
T 3bhy_A 146 VPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISA 225 (283)
T ss_dssp SSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred CCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHh
Confidence 123899999999987765555566789999999998875 458899999999999999999999999888888888877
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
....+....++.+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 226 VNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp TCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred cccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 665554444567889999999999999999999999999999998753
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-48 Score=402.26 Aligned_cols=257 Identities=26% Similarity=0.493 Sum_probs=213.7
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcC-CCCeeEEEEEEEcCCeEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG-HENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~-hpniv~~~~~~~~~~~~~ 173 (577)
..+|++++.||+|+||.||+|.+.. ++.||||++..... .....+.+.+|+.+++.|.+ ||||+++++++..++.+|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~ 132 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 132 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE
Confidence 3569999999999999999999764 89999999876543 34466789999999999964 699999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
|||| +.+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ +
T Consensus 133 lv~E-~~~~~L~~~l~~-----------------~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~----~ 190 (390)
T 2zmd_A 133 MVME-CGNIDLNSWLKK-----------------KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----D 190 (390)
T ss_dssp EEEE-CCSEEHHHHHHH-----------------CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES----S
T ss_pred EEEe-cCCCCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE----C
Confidence 9999 568899887743 35789999999999999999999999999999999999996 4
Q ss_pred CCeeEEecCCCcccCCCC---CccccccCCccccchhccc------------CCCCCCchhhHHHHHHHHHhCCCCCCCC
Q 008127 254 SSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDK 318 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~------------~~~~~~DiwSlG~il~el~tg~~Pf~~~ 318 (577)
+.+||+|||+++...... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 270 (390)
T 2zmd_A 191 GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270 (390)
T ss_dssp SCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhh
Confidence 789999999998765432 2345689999999999864 4678899999999999999999999875
Q ss_pred Ch-hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 319 TE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 319 ~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.. ...+..++........+ ...+.++.+||.+||..||.+|||+.++|+||||+...
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 271 INQISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp CCHHHHHHHHHCTTSCCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred hHHHHHHHHHhCccccCCCC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence 43 34555666544433332 33578999999999999999999999999999998654
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-48 Score=415.98 Aligned_cols=260 Identities=27% Similarity=0.442 Sum_probs=223.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|+++.+|+.||||++.+...........+.+|+.+++.+ +||||++++++|...+.+|+|
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEEEE
Confidence 5799999999999999999999999999999999765433233456789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ......+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 264 mE~~~gg~L~~~l~~~-------------~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~---~~g~ 327 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNV-------------DEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD---DDGN 327 (543)
T ss_dssp ECCCTTCBHHHHHHTS-------------STTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSC
T ss_pred EEeccCCCHHHHHHHh-------------hcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEe---CCCC
Confidence 9999999998877432 01235699999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCC-ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCC----ChhHHHHHHHh
Q 008127 256 LKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLR 329 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~----~~~~~~~~i~~ 329 (577)
+||+|||+++....... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+. ...++...+..
T Consensus 328 vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~ 407 (543)
T 3c4z_A 328 VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407 (543)
T ss_dssp EEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH
T ss_pred EEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh
Confidence 99999999987654433 3456999999999998764 688999999999999999999999875 34566777777
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
....++ +.+|+++.+||.+||..||.+||+ +.++++||||+..
T Consensus 408 ~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 408 QAVTYP----DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp CCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred cccCCC----cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 655443 468999999999999999999996 5899999999864
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-49 Score=397.73 Aligned_cols=266 Identities=36% Similarity=0.636 Sum_probs=218.8
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC-----chhhHHHHHHHHHHHHHhcCCCCeeEEEEEE
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-----LPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-----~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 166 (577)
..+.++|++.+.||+|+||.||+|.+..+++.||||++...... .......+.+|+.+++.+ +||||+++++++
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~ 84 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFF 84 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEE
Confidence 34567899999999999999999999999999999998754321 112234578999999999 599999999999
Q ss_pred EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
..+. +|+||||+++|+|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 85 ~~~~-~~lv~e~~~~~~L~~~~~-----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl 146 (322)
T 2ycf_A 85 DAED-YYIVLELMEGGELFDKVV-----------------GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVL 146 (322)
T ss_dssp ESSS-EEEEEECCTTEETHHHHS-----------------TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred cCCc-eEEEEecCCCCcHHHHHh-----------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEE
Confidence 8765 899999999999988663 3467999999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChh-
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTED- 321 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~- 321 (577)
++..+.+..+||+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|..||......
T Consensus 147 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 226 (322)
T 2ycf_A 147 LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226 (322)
T ss_dssp ESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS
T ss_pred EecCCCCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH
Confidence 9864445679999999998775544445568999999999873 34688999999999999999999999765443
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 322 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.....+..+...+....+..+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~ 281 (322)
T 2ycf_A 227 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281 (322)
T ss_dssp CHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred HHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence 3445555555444333446789999999999999999999999999999999863
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=391.25 Aligned_cols=265 Identities=32% Similarity=0.538 Sum_probs=231.2
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.....++|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+ +||||+++++++.+.+
T Consensus 36 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 114 (335)
T 2owb_A 36 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDND 114 (335)
T ss_dssp ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred CcccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCC
Confidence 344567899999999999999999999999999999999776555556678899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+|||||++++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~~-----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-- 175 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKRR-----------------KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-- 175 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC--
T ss_pred eEEEEEecCCCCCHHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEc--
Confidence 999999999999998876433 6789999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
.++.+||+|||++..... ........||+.|+|||++.+. ++.++|||||||++|+|++|+.||......+.+..+.
T Consensus 176 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 254 (335)
T 2owb_A 176 -EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 254 (335)
T ss_dssp -TTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred -CCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh
Confidence 478899999999987643 2334456899999999998764 5889999999999999999999999888888877777
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 380 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~ 380 (577)
.....++ ..+++.+.+||.+||..||.+|||+.++++||||+......
T Consensus 255 ~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~ 302 (335)
T 2owb_A 255 KNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 302 (335)
T ss_dssp HTCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred cCCCCCC----ccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCccc
Confidence 7654433 35789999999999999999999999999999999765433
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-48 Score=390.24 Aligned_cols=261 Identities=28% Similarity=0.472 Sum_probs=213.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|.+..+|+.||||++..... .....+.+.+|+.+++++. ||||+++++++...+.+++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED-DPVIKKIALREIRMLKQLK-HPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHhCC-CCCccchhheeecCCeEEEE
Confidence 579999999999999999999999999999999866532 2345677889999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||++++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 81 ~e~~~~~~l~~~~~-----------------~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~ 140 (311)
T 4agu_A 81 FEYCDHTVLHELDR-----------------YQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSV 140 (311)
T ss_dssp EECCSEEHHHHHHH-----------------TSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSC
T ss_pred EEeCCCchHHHHHh-----------------hhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc---CCCC
Confidence 99999988876542 236799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+.....
T Consensus 141 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 220 (311)
T 4agu_A 141 IKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG 220 (311)
T ss_dssp EEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred EEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhc
Confidence 999999999876532 33456689999999998864 458899999999999999999999988877666554432100
Q ss_pred -------------------CCCCC--------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 333 -------------------DFRRK--------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 333 -------------------~~~~~--------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
..+.. .++.+++.+.+||.+||..||.+|||+.++|+||||+....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 221 DLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp SCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred ccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence 00000 12568899999999999999999999999999999998653
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-47 Score=382.15 Aligned_cols=262 Identities=32% Similarity=0.537 Sum_probs=229.2
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
...++|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+ +||||+++++++...+.+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 90 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFV 90 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEE
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEE
Confidence 3456899999999999999999999999999999999776555556678899999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 91 ~lv~e~~~~~~L~~~~~~~-----------------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~ 150 (294)
T 2rku_A 91 FVVLELCRRRSLLELHKRR-----------------KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---E 150 (294)
T ss_dssp EEEEECCTTCBHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---T
T ss_pred EEEEecCCCCCHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEc---C
Confidence 9999999999998866433 6789999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCC-CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 253 DSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
++.+||+|||++..... ........||+.|+|||++.+. ++.++||||||+++|+|++|+.||......+.+..+...
T Consensus 151 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 230 (294)
T 2rku_A 151 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230 (294)
T ss_dssp TCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT
T ss_pred CCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc
Confidence 78899999999987643 2334456899999999998764 588999999999999999999999988888877777765
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
....+ ..+++.+.+||.+||+.||.+|||+.++++||||+.....
T Consensus 231 ~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~ 275 (294)
T 2rku_A 231 EYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 275 (294)
T ss_dssp CCCCC----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCC
T ss_pred cCCCc----cccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCcC
Confidence 54333 4578999999999999999999999999999999876543
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-48 Score=382.99 Aligned_cols=258 Identities=30% Similarity=0.579 Sum_probs=224.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+..+++.||||++.............+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEEEE
Confidence 5799999999999999999999999999999998654322223356789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+||+++ .++.
T Consensus 93 ~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~ 152 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-----------------GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG---YKGE 152 (284)
T ss_dssp ECCCTTEEHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTCC
T ss_pred EEeCCCCcHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEc---CCCC
Confidence 9999999999877543 5689999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||++...... ......||+.|+|||++.+. ++.++||||||+++|+|++|..||......+....+......+
T Consensus 153 ~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 231 (284)
T 2vgo_A 153 LKIADFGWSVHAPSL-RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231 (284)
T ss_dssp EEECCCTTCEECSSS-CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC
T ss_pred EEEecccccccCccc-ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCC
Confidence 999999999765432 23456899999999988764 5889999999999999999999999888888887777765443
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCC
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
+ +.++..+.+||.+||..||.+|||+.++++||||+.....
T Consensus 232 ~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~ 272 (284)
T 2vgo_A 232 P----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 272 (284)
T ss_dssp C----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCC
T ss_pred C----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhccc
Confidence 3 4578999999999999999999999999999999976543
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=388.52 Aligned_cols=255 Identities=31% Similarity=0.536 Sum_probs=220.5
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|...+.||+|+||.||+|++..+|+.||||++..... ...+.+.+|+.+++.+ +||||+++++++...+.+|+||
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 121 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVLM 121 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch---hHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEE
Confidence 58888899999999999999999999999999875432 2456788999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+.+. ...+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+
T Consensus 122 e~~~~~~L~~~l~------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~ 180 (321)
T 2c30_A 122 EFLQGGALTDIVS------------------QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT---LDGRV 180 (321)
T ss_dssp CCCCSCBHHHHHT------------------TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCE
T ss_pred ecCCCCCHHHHHH------------------hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCcE
Confidence 9999999988652 35689999999999999999999999999999999999998 47889
Q ss_pred eEEecCCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 257 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 257 kl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
||+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+....+.......
T Consensus 181 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 260 (321)
T 2c30_A 181 KLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK 260 (321)
T ss_dssp EECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCC
T ss_pred EEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 99999999866433 233566899999999988654 5889999999999999999999999888877777776654322
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
......+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 261 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 261 -LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp -CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred -cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence 122345789999999999999999999999999999998754
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-48 Score=395.68 Aligned_cols=261 Identities=28% Similarity=0.441 Sum_probs=217.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-------
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------- 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------- 168 (577)
.+|++++.||+|+||.||+|+++.+|+.||||++...... ......+.+|+.+++.+. ||||+++++++..
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLK-HENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS-SSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEEC------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc-ccchHHHHHHHHHHHhcc-CCCcccHhheeecccccccc
Confidence 5899999999999999999999999999999998655432 223456789999999995 9999999999876
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
.+.+|+|||||++ +|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~----------------~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~ 157 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSN----------------VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 157 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHC----------------TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred CCceEEEEEeccCC-CHHHHHhh----------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE
Confidence 4578999999974 77765532 23569999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCC-----CCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKP-----GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||+|..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+...
T Consensus 158 ~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 234 (351)
T 3mi9_A 158 T---RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 234 (351)
T ss_dssp C---TTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred c---CCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 8 478999999999976542 223345689999999998865 358899999999999999999999999888
Q ss_pred hHHHHHHHhCCCCCCCCCCCCC----------------------------CHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSI----------------------------SNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~----------------------------s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
......+.......+...|+.+ ++.+.+||.+||..||.+|||+.++|+|||
T Consensus 235 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 314 (351)
T 3mi9_A 235 QHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314 (351)
T ss_dssp HHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence 8877776654333333333332 678999999999999999999999999999
Q ss_pred ccccCC
Q 008127 373 VREGGD 378 (577)
Q Consensus 373 f~~~~~ 378 (577)
|+....
T Consensus 315 f~~~~~ 320 (351)
T 3mi9_A 315 FWSDPM 320 (351)
T ss_dssp GGSSSC
T ss_pred cCCCCC
Confidence 987544
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-48 Score=382.66 Aligned_cols=258 Identities=34% Similarity=0.593 Sum_probs=216.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEEE
Confidence 35899999999999999999999999999999998654322223456789999999999 49999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 89 v~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~ 148 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKH-----------------GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD---AHM 148 (276)
T ss_dssp EEECCCSCBHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEEC---TTS
T ss_pred EEeccCCCcHHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEEC---CCC
Confidence 99999999999887543 5689999999999999999999999999999999999998 477
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++.............||+.|+|||++.+.. +.++||||||+++|+|++|..||...........+.....
T Consensus 149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~ 228 (276)
T 2h6d_A 149 NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF 228 (276)
T ss_dssp CEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred CEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc
Confidence 89999999998776555555678999999999987654 5789999999999999999999998888888877776654
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..+ ..++..+.++|.+||+.||.+|||+.++++||||++..
T Consensus 229 ~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 229 YIP----EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp CCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred cCc----hhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 332 45789999999999999999999999999999998754
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-47 Score=380.71 Aligned_cols=257 Identities=21% Similarity=0.351 Sum_probs=216.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----CCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~~ 171 (577)
..|++.+.||+|+||.||+|.+..++..||+|.+..... .....+.+.+|+.+++.+ +||||+++++++.. ...
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 103 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCce
Confidence 468999999999999999999999999999999876543 244567899999999999 59999999999875 467
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCcEEeec
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKS 249 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~NILl~~ 249 (577)
+|+||||+++|+|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~ 166 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRF-----------------KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG 166 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS
T ss_pred EEEEEEecCCCCHHHHHHHc-----------------cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEEC
Confidence 99999999999999887543 66899999999999999999999999 999999999999973
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhH-HHHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVL 328 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~-~~~~i~ 328 (577)
.++.+||+|||++..... .......||+.|+|||++.+.++.++|||||||++|+|++|+.||.+..... ....+.
T Consensus 167 --~~~~~kl~Dfg~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~ 243 (290)
T 1t4h_A 167 --PTGSVKIGDLGLATLKRA-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT 243 (290)
T ss_dssp --TTSCEEECCTTGGGGCCT-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHT
T ss_pred --CCCCEEEeeCCCcccccc-cccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHh
Confidence 467899999999976543 3344568999999999999889999999999999999999999998755444 444443
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+... .......++++.+||.+||..||.+|||+.++++||||++.
T Consensus 244 ~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 244 SGVKP--ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp TTCCC--GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred ccCCc--cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 33221 11224567899999999999999999999999999999863
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-49 Score=395.39 Aligned_cols=265 Identities=27% Similarity=0.431 Sum_probs=221.6
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN- 170 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~- 170 (577)
..+.++|++.+.||+|+||.||+|++..+++.||||++.............+.+|+.++.++ +||||+++++++....
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~ 86 (311)
T 3ork_A 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETP 86 (311)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEET
T ss_pred ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCC
Confidence 44667899999999999999999999999999999999776554555677899999999999 5999999999987543
Q ss_pred ---eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 171 ---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~ 149 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIVHTE-----------------GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred CCcccEEEEecCCCCCHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE
Confidence 459999999999999877543 578999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC----CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
+ .++.+||+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+....+
T Consensus 150 ~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~ 226 (311)
T 3ork_A 150 S---ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226 (311)
T ss_dssp E---TTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred c---CCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 8 47889999999998664332 22345799999999988764 5889999999999999999999999988888
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
....+.......+...++.+++++.+||.+||..||.+||++.+++.|+|++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp HHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 8777777655444444567899999999999999999999999999999998643
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=404.22 Aligned_cols=262 Identities=29% Similarity=0.491 Sum_probs=207.6
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++.+.||+|+||.||+|+++.+|+.||||++.... ........+.+|+.+|+.+. ||||+++++++...
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~ 101 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRILREITILNRLK-SDYIIRLYDLIIPDDLLK 101 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTTT
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHcC-CCCcceEEEEEecCCCCc
Confidence 5568999999999999999999999999999999996542 23445678899999999995 99999999999765
Q ss_pred -CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 -NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
+.+|+||||+. |+|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~-----------------~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~ 163 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFK-----------------TPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN 163 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHH-----------------SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred CCeEEEEEecCC-cCHHHHHh-----------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEEC
Confidence 57999999995 68887663 346799999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCC-----------------------CccccccCCccccchhc-c-cCCCCCCchhhHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGK-----------------------KFQDIVGSAYYVAPEVL-K-RKSGPESDVWSIGV 303 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~-----------------------~~~~~~gt~~y~aPE~~-~-~~~~~~~DiwSlG~ 303 (577)
.++.+||+|||+|+...... .....+||++|+|||++ . ..++.++|||||||
T Consensus 164 ---~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~ 240 (432)
T 3n9x_A 164 ---QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGC 240 (432)
T ss_dssp ---TTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred ---CCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHH
Confidence 47899999999998764321 23567899999999985 3 34688999999999
Q ss_pred HHHHHHhC-----------CCCCCCCCh-----------------hHHHHHH-----------------------HhCCC
Q 008127 304 ITYILLCG-----------RRPFWDKTE-----------------DGIFKEV-----------------------LRNKP 332 (577)
Q Consensus 304 il~el~tg-----------~~Pf~~~~~-----------------~~~~~~i-----------------------~~~~~ 332 (577)
|+|||++| .++|.+.+. .+.+..+ +...+
T Consensus 241 il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~ 320 (432)
T 3n9x_A 241 IFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFP 320 (432)
T ss_dssp HHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC
T ss_pred HHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCC
Confidence 99999984 444444321 1111111 11111
Q ss_pred CCCCC----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 333 DFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 333 ~~~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
..... .++.+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 321 ~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 321 HRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp CCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred CCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence 11111 13568999999999999999999999999999999998643
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-48 Score=396.68 Aligned_cols=258 Identities=29% Similarity=0.482 Sum_probs=212.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|++++.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.+. ||||+++++++...
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~ 100 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDETLD 100 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSCSSTT
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCC-CcCCCCceeeEecCCccc
Confidence 4578999999999999999999999999999999986543 23445677899999999995 99999999999865
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|+||||+ +++|.+.+.. ..+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 101 ~~~~~~lv~e~~-~~~L~~~~~~------------------~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll 161 (367)
T 1cm8_A 101 DFTDFYLVMPFM-GTDLGKLMKH------------------EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV 161 (367)
T ss_dssp TCCCCEEEEECC-SEEHHHHHHH------------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred cCceEEEEEecC-CCCHHHHHhc------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE
Confidence 3469999999 8888776531 468999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+ .++.+||+|||+++.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+.
T Consensus 162 ~---~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~ 236 (367)
T 1cm8_A 162 N---EDCELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK 236 (367)
T ss_dssp C---TTCCEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred c---CCCCEEEEeeeccccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 8 478899999999987543 3456789999999998865 56899999999999999999999999888777666
Q ss_pred HHHhCC-----------------------CCCCC----CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 326 EVLRNK-----------------------PDFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 326 ~i~~~~-----------------------~~~~~----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+.... +.... ..++.+++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus 237 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 237 EIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 654311 11111 12356789999999999999999999999999999998754
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-48 Score=399.99 Aligned_cols=259 Identities=28% Similarity=0.485 Sum_probs=215.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 168 (577)
..++|++++.||+|+||.||+|++..+|+.||||++..... ...+|+.+++.+ +||||++++++|..
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVL-DHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTC-CCTTBCCEEEEEEEC----
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHc-CCCCccchhheeeecCccc
Confidence 34689999999999999999999999999999999865432 124799999999 59999999999843
Q ss_pred ---------------------------------CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHH
Q 008127 169 ---------------------------------DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215 (577)
Q Consensus 169 ---------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (577)
..++++|||||+ |+|.+.+... ......+++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-------------~~~~~~l~~~~ 142 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSF-------------IRSGRSIPMNL 142 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHH-------------HHTTCCCCHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHH-------------HhcCCCCCHHH
Confidence 345899999997 5887766432 23457899999
Q ss_pred HHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCC
Q 008127 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSG 293 (577)
Q Consensus 216 ~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~ 293 (577)
++.++.||+.||.|||++||+||||||+|||++. .++.+||+|||+|+...........+||+.|+|||++.+ .++
T Consensus 143 ~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ 220 (383)
T 3eb0_A 143 ISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYT 220 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEET--TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCC
T ss_pred HHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcC--CCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCC
Confidence 9999999999999999999999999999999974 467899999999987766666667789999999998765 368
Q ss_pred CCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC------------CC-----CCC---C-----CCCCCCHHHHH
Q 008127 294 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK------------PD-----FRR---K-----PWPSISNSAKD 348 (577)
Q Consensus 294 ~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~------------~~-----~~~---~-----~~~~~s~~~~~ 348 (577)
.++|||||||++|+|++|+.||.+.+..+.+..++... +. ++. . ....+++++.+
T Consensus 221 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (383)
T 3eb0_A 221 PSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAID 300 (383)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHH
T ss_pred cchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHH
Confidence 89999999999999999999999988877776665311 11 110 0 11347889999
Q ss_pred HHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 349 FVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 349 li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
||.+||..||.+|||+.++|+||||++.
T Consensus 301 li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (383)
T 3eb0_A 301 LLEQILRYEPDLRINPYEAMAHPFFDHL 328 (383)
T ss_dssp HHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred HHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence 9999999999999999999999999865
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-48 Score=382.54 Aligned_cols=258 Identities=34% Similarity=0.608 Sum_probs=196.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEEEE
Confidence 4799999999999999999999999999999998654322223357789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+||+++ .++.
T Consensus 90 ~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~---~~~~ 150 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN----------------RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT---RNMN 150 (278)
T ss_dssp EECCTTEEHHHHHHT----------------CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEEC---TTCC
T ss_pred EecCCCCcHHHHHhh----------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCC
Confidence 999999999887642 235789999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||++...... .......||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........+......
T Consensus 151 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 230 (278)
T 3cok_A 151 IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE 230 (278)
T ss_dssp EEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCC
T ss_pred EEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccC
Confidence 999999999876432 223456799999999988754 588999999999999999999999877665555444333222
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
....++.++.+||.+||..||.+|||+.++++||||....
T Consensus 231 ----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 231 ----MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp ----CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred ----CccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 2245789999999999999999999999999999998654
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-48 Score=396.14 Aligned_cols=254 Identities=31% Similarity=0.564 Sum_probs=215.6
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch-----hhHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----IAVEDVKREVKILQALAGHENVVKFYNAFE 167 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 167 (577)
.+.++|++.+.||+|+||.||+|+++.+|+.||||++........ .....+.+|+.+++++ +||||+++++++.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~ 99 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFE 99 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEE
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe
Confidence 456789999999999999999999999999999999976543211 1334567899999999 5999999999999
Q ss_pred cCCeEEEEEeccCCC-chhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 168 DDNYVYIAMELCEGG-ELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 168 ~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
..+.+++||||+.+| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 100 ~~~~~~lv~e~~~~g~~l~~~~~-----------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIl 162 (335)
T 3dls_A 100 NQGFFQLVMEKHGSGLDLFAFID-----------------RHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIV 162 (335)
T ss_dssp CSSEEEEEEECCTTSCBHHHHHH-----------------TCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred eCCEEEEEEEeCCCCccHHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEE
Confidence 999999999999777 8877653 3467999999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
++ .++.+||+|||++............+||+.|+|||++.+.. +.++|||||||++|+|++|..||.....
T Consensus 163 l~---~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---- 235 (335)
T 3dls_A 163 IA---EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE---- 235 (335)
T ss_dssp EC---TTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----
T ss_pred Ec---CCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----
Confidence 98 47899999999998877666666778999999999987643 6789999999999999999999965322
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.... .......+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 236 --~~~~----~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 282 (335)
T 3dls_A 236 --TVEA----AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV 282 (335)
T ss_dssp --GTTT----CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred --HHhh----ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence 1111 1122245789999999999999999999999999999998754
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-47 Score=388.48 Aligned_cols=255 Identities=26% Similarity=0.490 Sum_probs=212.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYV 172 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~ 172 (577)
.++|++++.||+|+||.||+|++..+++.||||++... ..+.+.+|+.+++++.+||||+++++++.. ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 35799999999999999999999999999999998643 346789999999999779999999999987 6789
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++||||+++++|.+.+ ..+++..++.++.||+.||.|||++||+||||||+|||++. +
T Consensus 109 ~lv~e~~~~~~l~~~~--------------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~--~ 166 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLY--------------------QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--E 166 (330)
T ss_dssp EEEEECCCCCCHHHHG--------------------GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--T
T ss_pred EEEEeccCchhHHHHH--------------------HhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC--C
Confidence 9999999999987754 34789999999999999999999999999999999999984 3
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCC-hhHHHHHH--
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEV-- 327 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~-~~~~~~~i-- 327 (577)
+..+||+|||+|............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.... ..+.+..+
T Consensus 167 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~ 246 (330)
T 3nsz_A 167 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 246 (330)
T ss_dssp TTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHH
T ss_pred CCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHH
Confidence 34899999999988776666677789999999998865 46889999999999999999999995543 22222211
Q ss_pred -----------HhCCCCCC--------------------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 -----------LRNKPDFR--------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 -----------~~~~~~~~--------------------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
........ ......+++++.+||.+||..||.+|||+.++|+||||+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~ 326 (330)
T 3nsz_A 247 VLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326 (330)
T ss_dssp HHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred hcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence 11111110 01112378999999999999999999999999999999975
Q ss_pred C
Q 008127 377 G 377 (577)
Q Consensus 377 ~ 377 (577)
.
T Consensus 327 ~ 327 (330)
T 3nsz_A 327 V 327 (330)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=403.68 Aligned_cols=262 Identities=27% Similarity=0.398 Sum_probs=215.4
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc-----CCCCeeEEEEEE
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-----GHENVVKFYNAF 166 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpniv~~~~~~ 166 (577)
..+..+|++++.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.+. +||||+++++++
T Consensus 93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~ 168 (429)
T 3kvw_A 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF 168 (429)
T ss_dssp CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE
T ss_pred CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeec
Confidence 34667899999999999999999999999999999998654 234567888999998885 578999999999
Q ss_pred EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
...+.+|+||||+. ++|.+.+... ....+++..++.++.||+.||.|||++|||||||||+|||
T Consensus 169 ~~~~~~~lv~e~~~-~~L~~~l~~~---------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIL 232 (429)
T 3kvw_A 169 TFRNHICMTFELLS-MNLYELIKKN---------------KFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENIL 232 (429)
T ss_dssp EETTEEEEEECCCC-CBHHHHHHHT---------------TTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEE
T ss_pred ccCCeEEEEEeccC-CCHHHHHHhc---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 99999999999995 6898877543 2356899999999999999999999999999999999999
Q ss_pred eecCCCCCC--eeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHH
Q 008127 247 FKSAKEDSS--LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323 (577)
Q Consensus 247 l~~~~~~~~--vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~ 323 (577)
++. ++. +||+|||+|..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.
T Consensus 233 l~~---~~~~~vkL~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~ 307 (429)
T 3kvw_A 233 LKQ---QGRSGIKVIDFGSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQ 307 (429)
T ss_dssp ESS---TTSCCEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred Ecc---CCCcceEEeecccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 984 444 99999999976542 3345689999999998765 568999999999999999999999999888777
Q ss_pred HHHHHhCCCCC--------------------CC------------------------------CC-----CCCCCHHHHH
Q 008127 324 FKEVLRNKPDF--------------------RR------------------------------KP-----WPSISNSAKD 348 (577)
Q Consensus 324 ~~~i~~~~~~~--------------------~~------------------------------~~-----~~~~s~~~~~ 348 (577)
+..+....... +. .. ....++.+.+
T Consensus 308 l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 387 (429)
T 3kvw_A 308 LACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLD 387 (429)
T ss_dssp HHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHH
T ss_pred HHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHH
Confidence 66554311000 00 00 0123678999
Q ss_pred HHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 349 FVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 349 li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
||.+||++||.+|||+.++|+||||+....
T Consensus 388 li~~~L~~dP~~Rpta~e~L~Hpw~~~~~~ 417 (429)
T 3kvw_A 388 FLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417 (429)
T ss_dssp HHHHHTCSSTTTSCCHHHHHTSTTTC----
T ss_pred HHHHHCCCChhhCCCHHHHhCChhhccCCC
Confidence 999999999999999999999999997644
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-47 Score=381.44 Aligned_cols=264 Identities=26% Similarity=0.393 Sum_probs=220.0
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.+.+.++|++++.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++++ +||||+++++++...+
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~ 84 (294)
T 4eqm_A 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDD 84 (294)
T ss_dssp SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSS
T ss_pred hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCC
Confidence 345677999999999999999999999999999999998765554556678899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~-- 145 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESH-----------------GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID-- 145 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC--
T ss_pred eEEEEEeCCCCCCHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC--
Confidence 999999999999999877543 5789999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCC--CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.++.+||+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+........
T Consensus 146 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~ 224 (294)
T 4eqm_A 146 -SNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH 224 (294)
T ss_dssp -TTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH
T ss_pred -CCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 47889999999998765332 23346799999999988765 588899999999999999999999988877766665
Q ss_pred HhCCCC-CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 328 LRNKPD-FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 328 ~~~~~~-~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
+..... ......+.+|+.+.++|.+||..||.+||+..+.+.++|..-
T Consensus 225 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 225 IQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred hhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 554322 112234678999999999999999999997777777777554
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-47 Score=388.52 Aligned_cols=257 Identities=27% Similarity=0.503 Sum_probs=209.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCC-CCeeEEEEEEEcCCeEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-ENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-pniv~~~~~~~~~~~~~ 173 (577)
.++|++++.||+|+||.||+|.+ .+++.||||++..... .....+.+.+|+.++..+.+| |||+++++++..++.+|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 85 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence 45799999999999999999987 4688999999876543 344567899999999999632 99999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||| +.+|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ +
T Consensus 86 lv~e-~~~~~L~~~l~~-----------------~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~----~ 143 (343)
T 3dbq_A 86 MVME-CGNIDLNSWLKK-----------------KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----D 143 (343)
T ss_dssp EEEC-CCSEEHHHHHHH-----------------SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----T
T ss_pred EEEe-CCCCCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE----C
Confidence 9999 558899887743 36789999999999999999999999999999999999997 5
Q ss_pred CCeeEEecCCCcccCCCCC---ccccccCCccccchhcc------------cCCCCCCchhhHHHHHHHHHhCCCCCCCC
Q 008127 254 SSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK------------RKSGPESDVWSIGVITYILLCGRRPFWDK 318 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~------------~~~~~~~DiwSlG~il~el~tg~~Pf~~~ 318 (577)
+.+||+|||++........ ....+||+.|+|||++. ..++.++|||||||++|+|++|+.||.+.
T Consensus 144 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 223 (343)
T 3dbq_A 144 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 223 (343)
T ss_dssp TEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhh
Confidence 6799999999987654322 23568999999999885 34577899999999999999999999775
Q ss_pred Chh-HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 319 TED-GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 319 ~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
... ..+..++....... .....+.++.+||.+||..||.+|||+.++|+||||+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 281 (343)
T 3dbq_A 224 INQISKLHAIIDPNHEIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281 (343)
T ss_dssp CSHHHHHHHHHCTTSCCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred hhHHHHHHHHhcCCcccC--CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence 433 34444444333222 2234578899999999999999999999999999998643
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=398.75 Aligned_cols=260 Identities=28% Similarity=0.442 Sum_probs=212.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 168 (577)
...+|++.+.||+|+||.||+|++..+|+.||||++..... ...+|+++|+.| +|||||+++++|..
T Consensus 52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~ 123 (420)
T 1j1b_A 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKL-DHCNIVRLRYFFYSSGEKK 123 (420)
T ss_dssp EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTC-CCTTBCCEEEEEEEEETTT
T ss_pred ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHc-CCCCccceeeEEeccCCCC
Confidence 34579999999999999999999999999999999865432 134799999999 59999999998853
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..++++||||+++ +|.+.+... ......+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 124 ~~~~~~lv~e~~~~-~l~~~~~~~-------------~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl 189 (420)
T 1j1b_A 124 DEVYLNLVLDYVPE-TVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 189 (420)
T ss_dssp TEEEEEEEEECCCE-EHHHHHHHH-------------HHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE
T ss_pred cceeEEeehhcccc-cHHHHHHHH-------------hhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEE
Confidence 2247899999975 666554321 1235779999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+. +.+.+||+|||+|+...........+||+.|+|||++.+ .++.++||||||||+|||++|+.||.+.+..+.+.
T Consensus 190 ~~--~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~ 267 (420)
T 1j1b_A 190 DP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267 (420)
T ss_dssp ET--TTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred eC--CCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 84 346789999999987765555566789999999998864 46889999999999999999999999888776666
Q ss_pred HHHhC------------CCCCCC--------CC-----CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 326 EVLRN------------KPDFRR--------KP-----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 326 ~i~~~------------~~~~~~--------~~-----~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
+++.. .+.+.. .. .+.+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 268 ~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 65431 111111 11 135688999999999999999999999999999998754
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-47 Score=394.44 Aligned_cols=265 Identities=24% Similarity=0.369 Sum_probs=216.5
Q ss_pred cccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCC-----eeEEEE
Q 008127 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-----VVKFYN 164 (577)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn-----iv~~~~ 164 (577)
..+.+.++|++.+.||+|+||.||+|++..+++.||||++... ......+.+|+.+++.+..|++ |+.+++
T Consensus 48 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~ 123 (382)
T 2vx3_A 48 NGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKR 123 (382)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred cCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeee
Confidence 3455678999999999999999999999999999999998754 2345678889999998865664 999999
Q ss_pred EEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH--hcCceeccCCC
Q 008127 165 AFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH--LHGLVHRDMKP 242 (577)
Q Consensus 165 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH--~~~iiHrDlKp 242 (577)
++...+.+|+||||++ |+|.+.+... ....+++..++.++.||+.||.||| ..|||||||||
T Consensus 124 ~~~~~~~~~lv~e~~~-~~L~~~l~~~---------------~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp 187 (382)
T 2vx3_A 124 HFMFRNHLCLVFEMLS-YNLYDLLRNT---------------NFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKP 187 (382)
T ss_dssp EEEETTEEEEEEECCC-CBHHHHHHHT---------------TTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSG
T ss_pred eeccCCceEEEEecCC-CCHHHHHhhc---------------CcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCc
Confidence 9999999999999996 5998877543 2356899999999999999999999 57999999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED 321 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 321 (577)
+|||++. +.++.+||+|||+|+.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..
T Consensus 188 ~NIll~~-~~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 264 (382)
T 2vx3_A 188 ENILLCN-PKRSAIKIVDFGSSCQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264 (382)
T ss_dssp GGEEESS-TTSCCEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ccEEEec-CCCCcEEEEeccCceeccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999963 2467899999999987643 3346789999999998876 4688999999999999999999999998887
Q ss_pred HHHHHHHhCCCCCC------------------CCCC--------------C---C-------------------------
Q 008127 322 GIFKEVLRNKPDFR------------------RKPW--------------P---S------------------------- 341 (577)
Q Consensus 322 ~~~~~i~~~~~~~~------------------~~~~--------------~---~------------------------- 341 (577)
+.+..+.......+ ...| + .
T Consensus 265 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 344 (382)
T 2vx3_A 265 DQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVA 344 (382)
T ss_dssp HHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHH
T ss_pred HHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccch
Confidence 77766654211000 0000 0 0
Q ss_pred CCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 342 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 342 ~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.++++.+||.+||+.||++|||+.++|+||||+...
T Consensus 345 ~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 345 DYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 380 (382)
T ss_dssp HHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred hhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence 013789999999999999999999999999998753
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-47 Score=376.09 Aligned_cols=262 Identities=22% Similarity=0.343 Sum_probs=215.1
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
..+.++|++.+.||+|+||.||+|.+..+++.||||++...... ......+.+|+.++..+.+||||+++++++...+.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~ 85 (289)
T 1x8b_A 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG-SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH 85 (289)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT-SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTE
T ss_pred ccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe
Confidence 34567899999999999999999999999999999998764332 23456788999999999669999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+++||||+++|+|.+++.... .....+++..++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~ 152 (289)
T 1x8b_A 86 MLIQNEYCNGGSLADAISENY-------------RIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTS 152 (289)
T ss_dssp EEEEEECCTTCBHHHHHHHHH-------------HHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---
T ss_pred EEEEEEecCCCcHHHHHHhhc-------------ccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCC
Confidence 999999999999999886431 1236789999999999999999999999999999999999998432
Q ss_pred ----------------CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCC
Q 008127 252 ----------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 252 ----------------~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~ 313 (577)
....+||+|||++....... ...||+.|+|||++.+.. +.++|||||||++|+|++|.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~ 229 (289)
T 1x8b_A 153 IPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEP 229 (289)
T ss_dssp -----------------CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCcccccccccccccCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCC
Confidence 34589999999998765432 346999999999987653 468999999999999999998
Q ss_pred CCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 314 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
|+.... ....+..+... ...+.+++++.+||.+||..||.+|||+.++++||||+..
T Consensus 230 ~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 230 LPRNGD---QWHEIRQGRLP---RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp CCSSSH---HHHHHHTTCCC---CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred CCcchh---HHHHHHcCCCC---CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 875442 33444443321 2225688999999999999999999999999999999864
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=392.43 Aligned_cols=262 Identities=27% Similarity=0.398 Sum_probs=212.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc--hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL--PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~--~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.++|++++.||+|+||.||+|.+..+|+.||||++....... ......+.+|+.+++.+ +||||+++++++...+.+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCC
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCce
Confidence 457999999999999999999999999999999986543211 11224678999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++||||+++ +|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 88 ~lv~e~~~~-~l~~~~~~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~---~ 147 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKD----------------NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---E 147 (346)
T ss_dssp EEEEECCSE-EHHHHHTT----------------CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---T
T ss_pred EEEEEcCCC-CHHHHHHh----------------cCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEc---C
Confidence 999999975 77765532 235689999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCC-CCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 253 DSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
++.+||+|||++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....+.+..+..
T Consensus 148 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~ 227 (346)
T 1ua2_A 148 NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFE 227 (346)
T ss_dssp TCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 78999999999987643 233456789999999998864 357889999999999999999999999888887777765
Q ss_pred CCCCCCCCC------------------------CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKP------------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~------------------------~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
......... ++.+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 228 TLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 299 (346)
T ss_dssp HHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred HcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence 321111111 144678999999999999999999999999999998754
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=382.56 Aligned_cols=264 Identities=27% Similarity=0.498 Sum_probs=217.2
Q ss_pred cccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-
Q 008127 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED- 168 (577)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~- 168 (577)
......++|++++.||+|+||.||+|++..+|+.||||++..... ....+.+|+.+++++.+||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 334566789999999999999999999999999999999865432 346788999999999679999999999976
Q ss_pred -----CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCC
Q 008127 169 -----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 243 (577)
Q Consensus 169 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~ 243 (577)
.+.+|+||||+++|+|.+++... ....+++..++.++.||+.||.|||++||+||||||+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~ 158 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNT---------------KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQ 158 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHS---------------GGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGG
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhc---------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHH
Confidence 56899999999999999877542 2356899999999999999999999999999999999
Q ss_pred cEEeecCCCCCCeeEEecCCCcccCCC-CCccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCC
Q 008127 244 NFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFW 316 (577)
Q Consensus 244 NILl~~~~~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~ 316 (577)
|||++ .++.+||+|||++...... .......||+.|+|||++. ..++.++|||||||++|+|++|..||.
T Consensus 159 NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 235 (326)
T 2x7f_A 159 NVLLT---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 235 (326)
T ss_dssp GEEEC---TTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTT
T ss_pred HEEEc---CCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 99998 4788999999999876432 2234567999999999885 346889999999999999999999998
Q ss_pred CCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 317 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 317 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
+.........+...... ......+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 236 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 236 DMHPMRALFLIPRNPAP--RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp TSCHHHHHHHHHHSCCC--CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred CCcHHHHHHHhhcCccc--cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 88777766666554332 222356789999999999999999999999999999998753
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-47 Score=394.20 Aligned_cols=258 Identities=28% Similarity=0.444 Sum_probs=204.1
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 170 (577)
+.++|++++.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.+ +||||+++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 100 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLE 100 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTT
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC-ChHHHHHHHHHHHHHHhc-CCCCccceEEeeccccccc
Confidence 45689999999999999999999999999999999875432 234567788999999999 5999999999997654
Q ss_pred ---eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 171 ---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
.+|+|||||++ +|.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 101 ~~~~~~lv~e~~~~-~l~~~~~-------------------~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~ 160 (371)
T 2xrw_A 101 EFQDVYIVMELMDA-NLCQVIQ-------------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160 (371)
T ss_dssp TCCEEEEEEECCSE-EHHHHHH-------------------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred cccceEEEEEcCCC-CHHHHHh-------------------hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE
Confidence 78999999964 6766542 458899999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
+ .++.+||+|||+|............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..
T Consensus 161 ~---~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 237 (371)
T 2xrw_A 161 K---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 237 (371)
T ss_dssp C---TTSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred c---CCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 8 478899999999987765544556789999999998875 468899999999999999999999999888777776
Q ss_pred HHhCCCC----------------------CCCCC---------CCC-------CCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 327 VLRNKPD----------------------FRRKP---------WPS-------ISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 327 i~~~~~~----------------------~~~~~---------~~~-------~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
++..... +.... ++. .+.++.+||.+||..||.+|||+.++|
T Consensus 238 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l 317 (371)
T 2xrw_A 238 VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 317 (371)
T ss_dssp HHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHh
Confidence 6543211 11000 000 146789999999999999999999999
Q ss_pred cCcccccc
Q 008127 369 SHPWVREG 376 (577)
Q Consensus 369 ~hp~f~~~ 376 (577)
+||||+..
T Consensus 318 ~hp~~~~~ 325 (371)
T 2xrw_A 318 QHPYINVW 325 (371)
T ss_dssp HSHHHHTT
T ss_pred CCcchhhh
Confidence 99999853
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=394.35 Aligned_cols=260 Identities=31% Similarity=0.486 Sum_probs=201.7
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC---
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--- 169 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--- 169 (577)
.+.++|++++.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 103 (367)
T 2fst_X 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 103 (367)
T ss_dssp EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSG
T ss_pred CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEecCCcc
Confidence 34578999999999999999999999999999999986542 22345677889999999995 99999999999754
Q ss_pred ---CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 170 ---NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 170 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
..+|+|+||+ +++|.+.+. ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 104 ~~~~~~~lv~e~~-~~~L~~~~~------------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIl 164 (367)
T 2fst_X 104 EEFNDVYLVTHLM-GADLNNIVK------------------CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 164 (367)
T ss_dssp GGCCCCEEEEECC-CEECC-----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred ccCCeEEEEeccc-CCCHHHHHh------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEE
Confidence 5689999999 788877552 256899999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
++ .++.+||+|||+++.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+
T Consensus 165 l~---~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l 239 (367)
T 2fst_X 165 VN---EDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239 (367)
T ss_dssp EC---TTCCEEECC-----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred EC---CCCCEEEeeccccccccc--cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 98 478999999999987543 2445689999999998865 5688999999999999999999999988877666
Q ss_pred HHHHhCC-----------------------CCCCCC----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 325 KEVLRNK-----------------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 325 ~~i~~~~-----------------------~~~~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..++... +..+.. .++..++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus 240 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~ 319 (367)
T 2fst_X 240 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319 (367)
T ss_dssp HHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence 6554311 111111 1245788999999999999999999999999999999754
Q ss_pred C
Q 008127 378 D 378 (577)
Q Consensus 378 ~ 378 (577)
.
T Consensus 320 ~ 320 (367)
T 2fst_X 320 D 320 (367)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-47 Score=388.78 Aligned_cols=259 Identities=27% Similarity=0.435 Sum_probs=212.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|++..+|+.||||++..... .......+.+|+.+++.+. ||||+++++++...+.+|+|
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD-DKMVKKIAMREIKLLKQLR-HENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC-chHHHHHHHHHHHHHhhCC-CCCEeeEEEEeecCCEEEEE
Confidence 579999999999999999999999999999999865532 2345567889999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 103 ~e~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~---~~~~ 162 (331)
T 4aaa_A 103 FEFVDHTILDDLEL-----------------FPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS---QSGV 162 (331)
T ss_dssp EECCSEEHHHHHHH-----------------STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSC
T ss_pred EecCCcchHHHHHh-----------------hccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEc---CCCc
Confidence 99999887766432 236799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+.....
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 242 (331)
T 4aaa_A 163 VKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLG 242 (331)
T ss_dssp EEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred EEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC
Confidence 999999999865432 33455689999999999876 458899999999999999999999988877666655432110
Q ss_pred -------------------CCCC--------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 333 -------------------DFRR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 333 -------------------~~~~--------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
..+. ..++.+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 243 NLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp SCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred CCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence 0000 0124678999999999999999999999999999999864
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-47 Score=388.86 Aligned_cols=265 Identities=34% Similarity=0.604 Sum_probs=191.2
Q ss_pred ccccceeeee-eecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc---
Q 008127 93 DFDRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--- 168 (577)
Q Consensus 93 ~~~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--- 168 (577)
.+.++|.+.+ .||+|+||.||+|.++.+|+.||||++.... ...+|+..+.++.+||||+++++++..
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 96 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------KARQEVDHHWQASGGPHIVCILDVYENMHH 96 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH--------HHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH--------HHHHHHHHHHHhcCCCChHHHHHHHhhccC
Confidence 3567899965 6999999999999999999999999986431 123344443344479999999999876
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
...+|+|||||+||+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 97 ~~~~~~lv~e~~~gg~L~~~l~~~---------------~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll 161 (336)
T 3fhr_A 97 GKRCLLIIMECMEGGELFSRIQER---------------GDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLY 161 (336)
T ss_dssp TEEEEEEEEECCTTEEHHHHHHTC----------------CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CCceEEEEEeccCCCCHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 55689999999999999877432 23579999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHH---
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI--- 323 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--- 323 (577)
+..+.++.+||+|||++..... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......
T Consensus 162 ~~~~~~~~~kl~Dfg~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 240 (336)
T 3fhr_A 162 TSKEKDAVLKLTDFGFAKETTQ-NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 240 (336)
T ss_dssp SCSSTTCCEEECCCTTCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred EecCCCceEEEeccccceeccc-cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh
Confidence 8655567899999999986543 23345689999999998854 357889999999999999999999977655433
Q ss_pred -HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCC
Q 008127 324 -FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381 (577)
Q Consensus 324 -~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~ 381 (577)
...+......++...+..+++++.+||.+||..||.+|||+.++|+||||++......
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~ 299 (336)
T 3fhr_A 241 MKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQ 299 (336)
T ss_dssp ----------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGSCC
T ss_pred HHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccCCC
Confidence 2333344444555566789999999999999999999999999999999997654433
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-46 Score=375.95 Aligned_cols=259 Identities=27% Similarity=0.476 Sum_probs=223.9
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
...+.|++++.||+|+||.||+|++..+++.||||++..... ....+.+.+|+.+++.+ +||||+++++++...+.+
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 95 (303)
T 3a7i_A 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKL 95 (303)
T ss_dssp CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeE
Confidence 455689999999999999999999999999999999876543 23567899999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++++|.+++ ....+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 96 ~lv~e~~~~~~L~~~~------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~ 154 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLL------------------EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---E 154 (303)
T ss_dssp EEEEECCTTEEHHHHH------------------TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---T
T ss_pred EEEEEeCCCCcHHHHH------------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEEC---C
Confidence 9999999999998865 235789999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 253 DSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
++.+||+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++|..||...........+...
T Consensus 155 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 234 (303)
T 3a7i_A 155 HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 234 (303)
T ss_dssp TSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred CCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcC
Confidence 7889999999997765332 23456899999999988754 588999999999999999999999888877777666655
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.... ....++..+.+||.+||..||.+|||+.++++||||.....
T Consensus 235 ~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 235 NPPT---LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279 (303)
T ss_dssp CCCC---CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred CCCC---CccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence 4322 23468899999999999999999999999999999987544
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-47 Score=386.16 Aligned_cols=263 Identities=23% Similarity=0.380 Sum_probs=215.2
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC--
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-- 170 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-- 170 (577)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+.+++++. ||||+++++++....
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 82 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTR 82 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTC
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCCcceEEEEeecCCCc
Confidence 355689999999999999999999999999999999875432 224567789999999995 999999999998654
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec-
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS- 249 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~- 249 (577)
.+|+|||||++|+|.+++... .....+++..++.++.||+.||.|||++||+||||||+|||+..
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~--------------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~ 148 (319)
T 4euu_A 83 HKVLIMEFCPCGSLYTVLEEP--------------SNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIG 148 (319)
T ss_dssp CEEEEEECCTTCBHHHHHHSG--------------GGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEEC
T ss_pred eEEEEEeCCCCCCHHHHHHHh--------------ccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEecc
Confidence 789999999999999887533 12234899999999999999999999999999999999999832
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcc---------cCCCCCCchhhHHHHHHHHHhCCCCCCCCC-
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK---------RKSGPESDVWSIGVITYILLCGRRPFWDKT- 319 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~- 319 (577)
.+.++.+||+|||+++............||+.|+|||++. ..++.++|||||||++|+|++|+.||....
T Consensus 149 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 228 (319)
T 4euu_A 149 EDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228 (319)
T ss_dssp TTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTC
T ss_pred CCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 1246679999999998877666666778999999999875 456889999999999999999999996432
Q ss_pred ---hhHHHHHHHhCCCCC-------------------CC--CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 320 ---EDGIFKEVLRNKPDF-------------------RR--KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 320 ---~~~~~~~i~~~~~~~-------------------~~--~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
..+.+..++.+.+.. +. .....+++.+.+||.+||+.||++|||+.++|+||-
T Consensus 229 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 229 PRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp GGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred cchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence 345556666554321 10 001123457889999999999999999999999985
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-48 Score=395.09 Aligned_cols=257 Identities=27% Similarity=0.522 Sum_probs=215.2
Q ss_pred cceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
++|++++.||+|+||.||+|++. .+|+.||||++.+.... .....+.+.+|+.+++.+.+||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 57999999999999999999984 58999999998654321 112334567899999999779999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~--- 193 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR-----------------ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD--- 193 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH-----------------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---
T ss_pred EEEEeecCCCCCHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---
Confidence 99999999999999887543 5789999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCC--CccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCC----hhH
Q 008127 252 EDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKT----EDG 322 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~----~~~ 322 (577)
.++.+||+|||+++...... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.... ...
T Consensus 194 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~ 273 (355)
T 1vzo_A 194 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE 273 (355)
T ss_dssp TTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH
T ss_pred CCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHH
Confidence 47899999999997653222 2335689999999999875 24788999999999999999999997532 344
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
+...+....+.++ +.++..+.+||.+||..||.+|| |+.++++||||+..
T Consensus 274 ~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 274 ISRRILKSEPPYP----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp HHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHHHHhccCCCCC----cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 5555555544332 46889999999999999999999 99999999999864
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=390.16 Aligned_cols=257 Identities=26% Similarity=0.420 Sum_probs=205.6
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 170 (577)
+.++|++++.||+|+||.||+|+++.+|+.||||++.... .....+.+.+|+.+++++ +||||++++++|.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccch
Confidence 3457999999999999999999999999999999987543 234567899999999999 5999999999985433
Q ss_pred ------------------------------------------------------eEEEEEeccCCCchhHHHHHHhhhhh
Q 008127 171 ------------------------------------------------------YVYIAMELCEGGELLDRILAKMISTT 196 (577)
Q Consensus 171 ------------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~ 196 (577)
.+|+|||||++|+|.+++....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---- 156 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC---- 156 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC----
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc----
Confidence 4899999999999998875431
Q ss_pred hhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCC-----
Q 008127 197 LTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----- 271 (577)
Q Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~----- 271 (577)
.....++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 157 ----------~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~~~~~~~~~~~ 223 (332)
T 3qd2_B 157 ----------SLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLVTAMDQDEEEQTV 223 (332)
T ss_dssp ----------SGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEECSCC------
T ss_pred ----------CccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEe---CCCCEEEeecCcccccccchhhccc
Confidence 113356677899999999999999999999999999999998 47899999999998765432
Q ss_pred --------CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008127 272 --------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 342 (577)
Q Consensus 272 --------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 342 (577)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..|+.. .......+..... ...+...
T Consensus 224 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~ 298 (332)
T 3qd2_B 224 LTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKF---PLLFTQK 298 (332)
T ss_dssp --------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCC---CHHHHHH
T ss_pred cccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCC---CcccccC
Confidence 2234679999999998875 468899999999999999998777521 1222222322211 1112345
Q ss_pred CHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 343 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 343 s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
++.+.+||.+||..||.+|||+.++|+||||++
T Consensus 299 ~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 299 YPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp CHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred ChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 678899999999999999999999999999985
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-47 Score=391.79 Aligned_cols=260 Identities=29% Similarity=0.455 Sum_probs=216.4
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+..+|++++.||+|+||.||+|.+..+++.||||++.... .......+.+|+.+++++. ||||+++++++...
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 101 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQ 101 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTTT
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcC-CCCCccceeEEecCCccc
Confidence 3468999999999999999999999999999999987533 2345577899999999994 99999999999754
Q ss_pred -CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 -NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
..+|+||||+. |+|.+.+. ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 102 ~~~~~iv~e~~~-~~L~~~l~------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~ 162 (364)
T 3qyz_A 102 MKDVYIVQDLME-TDLYKLLK------------------TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162 (364)
T ss_dssp CCCEEEEEECCS-EEHHHHHH------------------HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred cceEEEEEcccC-cCHHHHHH------------------hCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEEC
Confidence 47999999996 58887663 24689999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCC----CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
.++.+||+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+
T Consensus 163 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 239 (364)
T 3qyz_A 163 ---TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 239 (364)
T ss_dssp ---TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG
T ss_pred ---CCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH
Confidence 47889999999998664322 1345689999999998643 36889999999999999999999999888777
Q ss_pred HHHHHHhCCCC-----------------------CCCC----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 323 IFKEVLRNKPD-----------------------FRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 323 ~~~~i~~~~~~-----------------------~~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.+..+...... .... .++.+++++.+||.+||..||.+|||+.++|+||||++
T Consensus 240 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 319 (364)
T 3qyz_A 240 QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319 (364)
T ss_dssp HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhh
Confidence 66665431110 0011 12467899999999999999999999999999999998
Q ss_pred cCC
Q 008127 376 GGD 378 (577)
Q Consensus 376 ~~~ 378 (577)
...
T Consensus 320 ~~~ 322 (364)
T 3qyz_A 320 YYD 322 (364)
T ss_dssp TCC
T ss_pred ccC
Confidence 643
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=375.07 Aligned_cols=262 Identities=23% Similarity=0.305 Sum_probs=200.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++.+.||+|+||.||+|.+..+|+.||||++..... .......+..+...++.+ +||||+++++++..++..|+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~-~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTV-DCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhC-CCCeEEEEeeeeeccCCEEE
Confidence 3579999999999999999999999999999999865432 122223333344445555 69999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCcEEeecCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrDlKp~NILl~~~~~~ 253 (577)
||||++ |+|.+.+... ......+++..++.++.||+.||.|||++ ||+||||||+|||++ .+
T Consensus 84 v~e~~~-~~l~~~l~~~-------------~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~---~~ 146 (290)
T 3fme_A 84 CMELMD-TSLDKFYKQV-------------IDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN---AL 146 (290)
T ss_dssp EEECCS-EEHHHHHHHH-------------HHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEEC---TT
T ss_pred EEehhc-cchHHHHHHH-------------HhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CC
Confidence 999997 5887766432 22457899999999999999999999998 999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcc-----cCCCCCCchhhHHHHHHHHHhCCCCCCCC-ChhHHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-----RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEV 327 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwSlG~il~el~tg~~Pf~~~-~~~~~~~~i 327 (577)
+.+||+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|+.||... .........
T Consensus 147 ~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 226 (290)
T 3fme_A 147 GQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226 (290)
T ss_dssp CCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH
T ss_pred CCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH
Confidence 899999999998776555555568999999999963 23577899999999999999999999763 444444444
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
...... ......+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 227 ~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~ 274 (290)
T 3fme_A 227 VEEPSP--QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274 (290)
T ss_dssp HHSCCC--CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred hccCCC--CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence 443322 222346889999999999999999999999999999998754
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-47 Score=398.91 Aligned_cols=269 Identities=26% Similarity=0.412 Sum_probs=197.2
Q ss_pred cccceee-eeeecccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE--c
Q 008127 94 FDRRYTI-GKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE--D 168 (577)
Q Consensus 94 ~~~~y~~-~~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~--~ 168 (577)
+.+.|.+ +++||+|+||.||+|+++ .+++.||||++..... ...+.+|+.+|+.|. ||||++++++|. .
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~ 91 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELK-HPNVISLQKVFLSHA 91 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCC-CTTBCCCCEEEEETT
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcC-CCCeeeEeeEEecCC
Confidence 4456887 568999999999999966 5789999999975532 245789999999995 999999999995 4
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...+|+||||+. |+|.+.+....... .......+++..++.++.||+.||.|||++||+||||||+|||+.
T Consensus 92 ~~~~~lv~e~~~-~~l~~~~~~~~~~~--------~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~ 162 (405)
T 3rgf_A 92 DRKVWLLFDYAE-HDLWHIIKFHRASK--------ANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM 162 (405)
T ss_dssp TTEEEEEEECCS-EEHHHHHHHHHHHC---------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred CCeEEEEEeCCC-CCHHHHHHHhcccc--------ccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEe
Confidence 778999999996 58888775432110 001223589999999999999999999999999999999999995
Q ss_pred cC-CCCCCeeEEecCCCcccCCC----CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChh
Q 008127 249 SA-KEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED 321 (577)
Q Consensus 249 ~~-~~~~~vkl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 321 (577)
.. ..++.+||+|||+|+..... ......+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+....
T Consensus 163 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 242 (405)
T 3rgf_A 163 GEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 242 (405)
T ss_dssp CSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC--
T ss_pred cCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcccc
Confidence 32 25689999999999876432 23345789999999998875 3688999999999999999999999765542
Q ss_pred ---------HHHHHHHhCCCCCCCCCCC----------------------------------CCCHHHHHHHHHccccCc
Q 008127 322 ---------GIFKEVLRNKPDFRRKPWP----------------------------------SISNSAKDFVKKLLVKDP 358 (577)
Q Consensus 322 ---------~~~~~i~~~~~~~~~~~~~----------------------------------~~s~~~~~li~~~l~~dP 358 (577)
+.+..+...........|+ ..++.+.+||.+||..||
T Consensus 243 ~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP 322 (405)
T 3rgf_A 243 IKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDP 322 (405)
T ss_dssp ----CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSG
T ss_pred ccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCc
Confidence 3444443321111111221 126789999999999999
Q ss_pred CCCCCHHHHhcCccccccC
Q 008127 359 RARLTAAQALSHPWVREGG 377 (577)
Q Consensus 359 ~~Rpt~~~il~hp~f~~~~ 377 (577)
.+|||+.++|+||||++..
T Consensus 323 ~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 323 IKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp GGSCCHHHHHTSGGGTSSS
T ss_pred ccCCCHHHHhcChhhccCC
Confidence 9999999999999998754
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-47 Score=374.56 Aligned_cols=259 Identities=33% Similarity=0.588 Sum_probs=218.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+.++|++.+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+.+++.+ +||||+++++++...+..|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEE
Confidence 34579999999999999999999999999999999865432 23457789999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+++++|.+++. ....+++..++.++.||+.||.|||++||+||||||+||+++ .+
T Consensus 82 lv~e~~~~~~L~~~l~-----------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~ 141 (276)
T 2yex_A 82 LFLEYCSGGELFDRIE-----------------PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ER 141 (276)
T ss_dssp EEEECCTTEEGGGGSB-----------------TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TT
T ss_pred EEEEecCCCcHHHHHh-----------------hccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc---cC
Confidence 9999999999987552 335789999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCC---CCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChh-HHHHHH
Q 008127 254 SSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEV 327 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~i 327 (577)
+.+||+|||++...... .......||+.|+|||++.+.. +.++|||||||++|+|++|..||.+.... ..+..+
T Consensus 142 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 221 (276)
T 2yex_A 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221 (276)
T ss_dssp CCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHH
T ss_pred CCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHh
Confidence 88999999999765322 2234568999999999987543 56899999999999999999999876543 333334
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
...... ...+..+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 222 ~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (276)
T 2yex_A 222 KEKKTY--LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (276)
T ss_dssp HTTCTT--STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred hhcccc--cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence 333222 223467899999999999999999999999999999998754
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-48 Score=402.50 Aligned_cols=257 Identities=19% Similarity=0.230 Sum_probs=204.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEE-------EE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFY-------NA 165 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~-------~~ 165 (577)
.++|++.+.||+|+||.||+|+++.+|+.||||++...........+.+.+|+.+++.+. +|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 468999999999999999999999999999999997654444456788999996555443 699999998 77
Q ss_pred EEcCC-----------------eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Q 008127 166 FEDDN-----------------YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAA 228 (577)
Q Consensus 166 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~ 228 (577)
+...+ ..|+||||| +|+|.+++....... .....+++..++.++.||+.||.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~----------~~~~~l~~~~~~~i~~qi~~aL~ 220 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHS----------STHKSLVHHARLQLTLQVIRLLA 220 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTT----------TTTHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccc----------cccccccHHHHHHHHHHHHHHHH
Confidence 77654 389999999 689999886541100 01123445788889999999999
Q ss_pred HHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC------------CCCCC
Q 008127 229 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK------------SGPES 296 (577)
Q Consensus 229 ~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~------------~~~~~ 296 (577)
|||++||+||||||+|||++ .++.+||+|||+|+... ......+| +.|+|||++.+. ++.++
T Consensus 221 ~LH~~~ivHrDikp~NIll~---~~~~~kL~DFG~a~~~~--~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T 3byv_A 221 SLHHYGLVHTYLRPVDIVLD---QRGGVFLTGFEHLVRDG--ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSF 294 (377)
T ss_dssp HHHHTTEECSCCCGGGEEEC---TTCCEEECCGGGCEETT--CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHH
T ss_pred HHHhCCeecCCCCHHHEEEc---CCCCEEEEechhheecC--CcccCCCC-cCccChhhhcccccccccccccccCChhh
Confidence 99999999999999999998 46899999999998643 34456678 999999998754 68899
Q ss_pred chhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 297 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 297 DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
|||||||++|+|++|+.||.+.........+.. .++.+++++.+||.+||..||.+|||+.++++||||+..
T Consensus 295 DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 366 (377)
T 3byv_A 295 DAWALGLVIYWIWCADLPITKDAALGGSEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 366 (377)
T ss_dssp HHHHHHHHHHHHHHSSCCC------CCSGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCCCcccccccchhhhhh--------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence 999999999999999999977654433332222 235688999999999999999999999999999999864
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=396.98 Aligned_cols=259 Identities=17% Similarity=0.179 Sum_probs=198.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc-CCCCeeEEE-------EEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-GHENVVKFY-------NAFE 167 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-~hpniv~~~-------~~~~ 167 (577)
..|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.|. +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45999999999999999999999999999999998765544556778889977777665 499988865 5554
Q ss_pred cC-----------------CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHH------HHHHHHHH
Q 008127 168 DD-----------------NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA------AVVVRQML 224 (577)
Q Consensus 168 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~i~~qil 224 (577)
.. ..+|||||||+ |+|.+++.... ..++...+ ..++.||+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----------------~~~~~~~~~~~~vk~~i~~qi~ 204 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----------------FVYVFRGDEGILALHILTAQLI 204 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----------------HSCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----------------cccchhhhhhhhhHHHHHHHHH
Confidence 33 34899999998 89999886541 12333344 56779999
Q ss_pred HHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc---CCCCCCchhhH
Q 008127 225 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSI 301 (577)
Q Consensus 225 ~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSl 301 (577)
.||.|||++||+||||||+|||++ .++.+||+|||+|+.... ......||+.|+|||++.+ .++.++|||||
T Consensus 205 ~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSl 279 (371)
T 3q60_A 205 RLAANLQSKGLVHGHFTPDNLFIM---PDGRLMLGDVSALWKVGT--RGPASSVPVTYAPREFLNASTATFTHALNAWQL 279 (371)
T ss_dssp HHHHHHHHTTEEETTCSGGGEEEC---TTSCEEECCGGGEEETTC--EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHH
T ss_pred HHHHHHHHCCCccCcCCHHHEEEC---CCCCEEEEecceeeecCC--CccCccCCcCCcChhhccCCCCCcCccccHHHH
Confidence 999999999999999999999998 478899999999986642 2224567899999999864 46889999999
Q ss_pred HHHHHHHHhCCCCCCCCChhHH--HHH---HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 302 GVITYILLCGRRPFWDKTEDGI--FKE---VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 302 G~il~el~tg~~Pf~~~~~~~~--~~~---i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
||++|+|++|+.||.+...... +.. .......+....++.+++.+.+||.+||+.||++|||+.++|+||||++.
T Consensus 280 G~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 359 (371)
T 3q60_A 280 GLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359 (371)
T ss_dssp HHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence 9999999999999977643211 000 11112223333446789999999999999999999999999999999864
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=380.90 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=211.8
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
...+|++.+.||+|+||.||+|.+..++. .||||++.... .....+.+.+|+.+++.+ +||||+++++++...+
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 123 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGR 123 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGG
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCC
Confidence 34689999999999999999999986665 49999987542 244567899999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+|||||++|+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~-- 185 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRT----------------HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD-- 185 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHT----------------TTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--
T ss_pred ccEEEeeCCCCCcHHHHHHh----------------cccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEC--
Confidence 99999999999999887642 235799999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+..
T Consensus 186 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~ 264 (325)
T 3kul_A 186 -SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264 (325)
T ss_dssp -TTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH
T ss_pred -CCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence 478999999999987643321 223456788999998874 45889999999999999999 99999999888888
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+..... ......+++.+.+||.+||..||.+|||+.++++
T Consensus 265 ~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 265 SSVEEGYR---LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp HHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcCCC---CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 87776532 2223568899999999999999999999999876
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=376.74 Aligned_cols=261 Identities=30% Similarity=0.459 Sum_probs=216.9
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.++|++++.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|+.+++.+ +||||+++++++...+.+
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 91 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKL 91 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC---HHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeE
Confidence 45678999999999999999999999999999999986543 23467789999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 92 ~lv~e~~~~~~l~~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~ 152 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLEL----------------DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT---L 152 (302)
T ss_dssp EEEEECCTTEEHHHHHHHH----------------TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---T
T ss_pred EEEEEeCCCCcHHHHHHhh----------------ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC---C
Confidence 9999999999998876432 36689999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCC-CCCccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 253 DSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
++.+||+|||++..... ........||+.|+|||++. ..++.++|||||||++|+|++|..||..........
T Consensus 153 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 232 (302)
T 2j7t_A 153 EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL 232 (302)
T ss_dssp TSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred CCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH
Confidence 77899999998754211 11223457999999999873 345789999999999999999999999888877777
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+........ .....++..+.+||.+||..||.+|||+.++++||||+...
T Consensus 233 ~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 283 (302)
T 2j7t_A 233 KIAKSDPPTL-LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT 283 (302)
T ss_dssp HHHHSCCCCC-SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred HHhccCCccc-CCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence 7766543321 12245789999999999999999999999999999998754
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=374.87 Aligned_cols=260 Identities=28% Similarity=0.511 Sum_probs=215.3
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+...++|++.+.||+|+||.||+|.+..+|+.||||.+.... ....+.+|+.+++.+ +||||+++++++...+.
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 98 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTD 98 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTE
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCE
Confidence 445678999999999999999999999999999999987543 345688999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+||+++
T Consensus 99 ~~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~--- 159 (314)
T 3com_A 99 LWIVMEYCGAGSVSDIIRLR----------------NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN--- 159 (314)
T ss_dssp EEEEEECCTTEEHHHHHHHH----------------TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---
T ss_pred EEEEeecCCCCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEEC---
Confidence 99999999999999877432 36789999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008127 252 EDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~ 329 (577)
.++.+||+|||++...... .......||+.|+|||++.+. ++.++|||||||++|+|++|..||...........+..
T Consensus 160 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 239 (314)
T 3com_A 160 TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT 239 (314)
T ss_dssp TTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred CCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc
Confidence 4788999999999766433 223456799999999988754 58899999999999999999999988777666555544
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.... .......++..+.+||.+||..||.+|||+.++++||||+...
T Consensus 240 ~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~ 286 (314)
T 3com_A 240 NPPP-TFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286 (314)
T ss_dssp SCCC-CCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred CCCc-ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence 4322 1122345789999999999999999999999999999999754
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=379.13 Aligned_cols=265 Identities=26% Similarity=0.375 Sum_probs=217.6
Q ss_pred cccceeeeeeecccCCeEEEEEEEc-CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEE---
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDK-ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFE--- 167 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~--- 167 (577)
+.++|++.+.||+|+||.||+|++. .+|+.||||++...... ......+.+|+.+++.+. +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc-ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4468999999999999999999985 67889999998654321 112234667888887774 5999999999987
Q ss_pred --cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcE
Q 008127 168 --DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 245 (577)
Q Consensus 168 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NI 245 (577)
....+++||||+. |+|.+++... ....+++..++.++.||+.||.|||++||+||||||+||
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~---------------~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Ni 151 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKV---------------PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI 151 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHS---------------CTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhc---------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHe
Confidence 5678999999997 6998877533 234589999999999999999999999999999999999
Q ss_pred EeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 246 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 246 Ll~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
|++ .++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+
T Consensus 152 li~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 228 (326)
T 1blx_A 152 LVT---SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228 (326)
T ss_dssp EEC---TTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred EEc---CCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 998 478999999999987654444556789999999998865 4688999999999999999999999988887777
Q ss_pred HHHHhCCCCC-----------------------CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 325 KEVLRNKPDF-----------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 325 ~~i~~~~~~~-----------------------~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
..++...... ....++.+++.+.+||.+||..||.+|||+.++++||||+....
T Consensus 229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 229 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305 (326)
T ss_dssp HHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred HHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence 7665421100 00123568899999999999999999999999999999997654
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=387.85 Aligned_cols=257 Identities=32% Similarity=0.510 Sum_probs=212.6
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE-
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV- 172 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~- 172 (577)
+.++|.+.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.+. ||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 117 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASSLR 117 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSST
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc-chhHHHHHHHHHHHHHhcC-CCCchhhhhheeccCCcc
Confidence 56789999999999999999999999999999999875432 3445678899999999995 99999999999877654
Q ss_pred -----EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 173 -----YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 173 -----~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
|+||||+. ++|.+.+ ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 118 ~~~~~~lv~e~~~-~~l~~~~-------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll 177 (371)
T 4exu_A 118 NFYDFYLVMPFMQ-TDLQKIM-------------------GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 177 (371)
T ss_dssp TCCCCEEEEECCC-EEHHHHT-------------------TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred cceeEEEEEcccc-ccHHHHh-------------------hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE
Confidence 99999996 5776543 2458999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+ .++.+||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+.
T Consensus 178 ~---~~~~~kL~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 252 (371)
T 4exu_A 178 N---EDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 252 (371)
T ss_dssp C---TTCCEEECSTTCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred C---CCCCEEEEecCccccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 8 478899999999986543 3345689999999998865 56889999999999999999999999888777666
Q ss_pred HHHhCCC-----------------------CCCCC----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 326 EVLRNKP-----------------------DFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 326 ~i~~~~~-----------------------~~~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.++.... ..... .++.+++.+.+||.+||+.||.+|||+.++|+||||+...
T Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 331 (371)
T 4exu_A 253 QILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 331 (371)
T ss_dssp HHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence 6543111 11111 1245789999999999999999999999999999998653
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=386.14 Aligned_cols=257 Identities=26% Similarity=0.413 Sum_probs=214.6
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++.+.||+|+||.||+|.+..+|+.||+|++.... .......+.+|+.+++.+ +||||+++++++..++.+|+
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 108 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISI 108 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEEE
Confidence 457999999999999999999999999999999987642 244567899999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCcEEeecCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrDlKp~NILl~~~~~~ 253 (577)
|||||++|+|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+|||++ .+
T Consensus 109 v~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~ 168 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKKA-----------------GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SR 168 (360)
T ss_dssp EECCCTTCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TT
T ss_pred EEECCCCCCHHHHHHHc-----------------CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC---CC
Confidence 99999999999877543 5689999999999999999999996 999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH------
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE------ 326 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~------ 326 (577)
+.+||+|||++...... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||......+....
T Consensus 169 ~~~kl~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 247 (360)
T 3eqc_A 169 GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 247 (360)
T ss_dssp CCEEECCCCCCHHHHHH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----
T ss_pred CCEEEEECCCCcccccc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccccc
Confidence 88999999999754322 23456899999999988754 58899999999999999999999987665443221
Q ss_pred ------------------------------------HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 ------------------------------------VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 ------------------------------------i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+..... +......++.++.+||.+||..||.+|||+.++|+|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 248 GDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp --------------------------CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 122111 111223478899999999999999999999999999
Q ss_pred ccccccC
Q 008127 371 PWVREGG 377 (577)
Q Consensus 371 p~f~~~~ 377 (577)
|||+...
T Consensus 326 p~~~~~~ 332 (360)
T 3eqc_A 326 AFIKRSD 332 (360)
T ss_dssp HHHHHHH
T ss_pred hHhhcch
Confidence 9998754
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=379.83 Aligned_cols=261 Identities=33% Similarity=0.510 Sum_probs=212.2
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE-----
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE----- 167 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~----- 167 (577)
.+..+|++++.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 83 (320)
T 2i6l_A 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD---PQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQ 83 (320)
T ss_dssp EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS---HHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCB
T ss_pred ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC---hHHHHHHHHHHHHHHhc-CCCCeeEEEEeccccccc
Confidence 45678999999999999999999999999999999986543 45667889999999999 5999999999874
Q ss_pred ---------cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceec
Q 008127 168 ---------DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 238 (577)
Q Consensus 168 ---------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHr 238 (577)
..+.+|+||||++ |+|.+.+ ....+++..++.++.||+.||.|||++||+||
T Consensus 84 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 144 (320)
T 2i6l_A 84 LTDDVGSLTELNSVYIVQEYME-TDLANVL------------------EQGPLLEEHARLFMYQLLRGLKYIHSANVLHR 144 (320)
T ss_dssp CCC----CCSCSEEEEEEECCS-EEHHHHH------------------TTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred cccccccccccCceeEEeeccC-CCHHHHh------------------hcCCccHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 3468999999997 6887765 23578999999999999999999999999999
Q ss_pred cCCCCcEEeecCCCCCCeeEEecCCCcccCCC----CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCC
Q 008127 239 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGR 312 (577)
Q Consensus 239 DlKp~NILl~~~~~~~~vkl~DFGla~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~ 312 (577)
||||+|||++. .++.+||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|+
T Consensus 145 dlkp~Nil~~~--~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~ 222 (320)
T 2i6l_A 145 DLKPANLFINT--EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222 (320)
T ss_dssp CCSGGGEEEET--TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSS
T ss_pred CCCHHHEEEcC--CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCC
Confidence 99999999974 4578999999999876432 22344578999999998753 4688999999999999999999
Q ss_pred CCCCCCChhHHHHHHHhCCCCCC----------------------C----CCCCCCCHHHHHHHHHccccCcCCCCCHHH
Q 008127 313 RPFWDKTEDGIFKEVLRNKPDFR----------------------R----KPWPSISNSAKDFVKKLLVKDPRARLTAAQ 366 (577)
Q Consensus 313 ~Pf~~~~~~~~~~~i~~~~~~~~----------------------~----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~ 366 (577)
.||.+....+.+..+....+... . ..++.+++++.+||.+||..||.+|||+.+
T Consensus 223 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 302 (320)
T 2i6l_A 223 TLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEE 302 (320)
T ss_dssp CSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred CCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHH
Confidence 99998887777766654332110 0 012468899999999999999999999999
Q ss_pred HhcCccccccCC
Q 008127 367 ALSHPWVREGGD 378 (577)
Q Consensus 367 il~hp~f~~~~~ 378 (577)
+|+||||+....
T Consensus 303 ll~hp~~~~~~~ 314 (320)
T 2i6l_A 303 ALSHPYMSIYSF 314 (320)
T ss_dssp HHTSHHHHTTCC
T ss_pred HhCCcccccccC
Confidence 999999997543
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=376.32 Aligned_cols=260 Identities=26% Similarity=0.471 Sum_probs=218.0
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE--cCCe
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFE--DDNY 171 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~--~~~~ 171 (577)
.++|++.+.||+|+||.||+|.+..+++.||||++...... .......+.+|+.+++.+ +||||+++++++. ..+.
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---C
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCCe
Confidence 45899999999999999999999999999999998754321 123457789999999999 5999999999984 4568
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||+++ |.+.+... ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~---------------~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~--- 143 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSV---------------PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT--- 143 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHS---------------TTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---
T ss_pred EEEEehhccCC-HHHHHHhC---------------cccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---
Confidence 99999999876 66655322 346799999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCC---CCccccccCCccccchhcccCC---CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~~---~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++...... .......||+.|+|||++.+.. +.++|||||||++|+|++|..||.+....+...
T Consensus 144 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 223 (305)
T 2wtk_C 144 TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFE 223 (305)
T ss_dssp TTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred CCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH
Confidence 4789999999999866432 2234567999999999987532 668999999999999999999999988888888
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.+......++ ..+++.+.+||.+||..||.+|||+.++++||||+....
T Consensus 224 ~i~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 224 NIGKGSYAIP----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp HHHHCCCCCC----SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred HHhcCCCCCC----CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 8877654433 467899999999999999999999999999999987654
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=391.50 Aligned_cols=266 Identities=23% Similarity=0.381 Sum_probs=210.8
Q ss_pred CccccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc-------CCCCee
Q 008127 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-------GHENVV 160 (577)
Q Consensus 88 ~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-------~hpniv 160 (577)
+.....+.++|++.+.||+|+||.||+|++..+++.||||++... ....+.+.+|+.+++.+. +||||+
T Consensus 29 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv 104 (397)
T 1wak_A 29 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVV 104 (397)
T ss_dssp SCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBC
T ss_pred EehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceee
Confidence 334455678999999999999999999999999999999998654 235677899999999995 288899
Q ss_pred EEEEEEE----cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-Cc
Q 008127 161 KFYNAFE----DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GL 235 (577)
Q Consensus 161 ~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~i 235 (577)
++++++. ....+|+||||+ +++|.+.+... ....+++..++.++.||+.||.|||++ ||
T Consensus 105 ~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~---------------~~~~~~~~~~~~i~~qi~~aL~~lH~~~gi 168 (397)
T 1wak_A 105 QLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKS---------------NYQGLPLPCVKKIIQQVLQGLDYLHTKCRI 168 (397)
T ss_dssp CEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHT---------------TTSCCCHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred eeecceeecCCCCceEEEEEecc-CccHHHHHHhc---------------ccCCCCHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 9999988 566899999999 67787766433 235699999999999999999999998 99
Q ss_pred eeccCCCCcEEeecCC----------------------------------------------CCCCeeEEecCCCcccCC
Q 008127 236 VHRDMKPENFLFKSAK----------------------------------------------EDSSLKATDFGLSDFIKP 269 (577)
Q Consensus 236 iHrDlKp~NILl~~~~----------------------------------------------~~~~vkl~DFGla~~~~~ 269 (577)
+||||||+|||++..+ ....+||+|||+|.....
T Consensus 169 vHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~ 248 (397)
T 1wak_A 169 IHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK 248 (397)
T ss_dssp ECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB
T ss_pred ecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc
Confidence 9999999999998421 113799999999987643
Q ss_pred CCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCCh------hHHHHHHHhCCCCCC-------
Q 008127 270 GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE------DGIFKEVLRNKPDFR------- 335 (577)
Q Consensus 270 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~------~~~~~~i~~~~~~~~------- 335 (577)
.....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+. ...+..+.......+
T Consensus 249 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 326 (397)
T 1wak_A 249 --HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAG 326 (397)
T ss_dssp --CSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHC
T ss_pred --cCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcc
Confidence 23456899999999988754 68899999999999999999999976542 222222211000000
Q ss_pred -----------------C-C-------------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 336 -----------------R-K-------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 336 -----------------~-~-------------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
. . .....++.+.+||.+||+.||.+|||+.++|+||||+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 327 KYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp TTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred cccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 0 0 00123456889999999999999999999999999973
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-46 Score=382.65 Aligned_cols=263 Identities=26% Similarity=0.379 Sum_probs=204.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN----- 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~----- 170 (577)
++|++.+.||+|+||.||+|++..+|+.||||++..... ......+|+..+..+ +||||++++++|...+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 97 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR----FRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRR 97 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCTT----CCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTT
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc----ccHHHHHHHHHHHhc-CCCCcccHHHhhhcccccccc
Confidence 579999999999999999999999999999998865432 223456778888888 5999999999986533
Q ss_pred --eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH--hcCceeccCCCCcEE
Q 008127 171 --YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH--LHGLVHRDMKPENFL 246 (577)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH--~~~iiHrDlKp~NIL 246 (577)
.+++||||+++ +|.+.+... ......+++..++.++.||+.||.||| ++||+||||||+|||
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~~-------------~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIl 163 (360)
T 3e3p_A 98 DIYLNVVMEYVPD-TLHRCCRNY-------------YRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVL 163 (360)
T ss_dssp CEEEEEEEECCSC-BHHHHHHHH-------------HTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEE
T ss_pred ceeEEEEeecccc-cHHHHHHHH-------------hhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEE
Confidence 38999999975 565544321 234577899999999999999999999 999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
++. .++.+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+
T Consensus 164 l~~--~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 241 (360)
T 3e3p_A 164 VNE--ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL 241 (360)
T ss_dssp EET--TTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred EeC--CCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHH
Confidence 983 367999999999998776666667789999999998854 3688999999999999999999999998887777
Q ss_pred HHHHhCCCCCC--------------------C--------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 325 KEVLRNKPDFR--------------------R--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 325 ~~i~~~~~~~~--------------------~--------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
..+........ . ......++++.+||.+||+.||.+|||+.++|+||||++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 321 (360)
T 3e3p_A 242 HEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321 (360)
T ss_dssp HHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred HHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccccc
Confidence 76654211000 0 0012256789999999999999999999999999999986
Q ss_pred CCC
Q 008127 377 GDA 379 (577)
Q Consensus 377 ~~~ 379 (577)
...
T Consensus 322 ~~~ 324 (360)
T 3e3p_A 322 HDP 324 (360)
T ss_dssp GCT
T ss_pred CCc
Confidence 543
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=376.85 Aligned_cols=264 Identities=27% Similarity=0.386 Sum_probs=214.8
Q ss_pred ccccccceeeeeeecccCCeEEEEEEE-cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCC------CeeEEE
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATD-KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE------NVVKFY 163 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~-~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp------niv~~~ 163 (577)
...+.++|++.+.||+|+||.||+|.+ ..+|+.||||++... ....+.+.+|+.+++.+. |+ +|++++
T Consensus 9 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~-~~~~~~~~~i~~~~ 83 (339)
T 1z57_A 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLN-TTDPNSTFRCVQML 83 (339)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHH-HHCTTCTTCBCCEE
T ss_pred CCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhh-hcCCCCceeeEeee
Confidence 344667999999999999999999998 568899999998653 235677899999999885 55 599999
Q ss_pred EEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCC
Q 008127 164 NAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 243 (577)
Q Consensus 164 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~ 243 (577)
+++...+.+|+||||+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+
T Consensus 84 ~~~~~~~~~~lv~e~~-~~~l~~~l~~~---------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~ 147 (339)
T 1z57_A 84 EWFEHHGHICIVFELL-GLSTYDFIKEN---------------GFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPE 147 (339)
T ss_dssp EEEEETTEEEEEEECC-CCBHHHHHHHT---------------TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGG
T ss_pred cccccCCcEEEEEcCC-CCCHHHHHHhc---------------CCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHH
Confidence 9999999999999999 88999877543 2346899999999999999999999999999999999
Q ss_pred cEEeecCCC----------------CCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHH
Q 008127 244 NFLFKSAKE----------------DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITY 306 (577)
Q Consensus 244 NILl~~~~~----------------~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~ 306 (577)
|||++..+. ++.+||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++|
T Consensus 148 Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ 225 (339)
T 1z57_A 148 NILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILI 225 (339)
T ss_dssp GEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHH
T ss_pred HEEEeccccccccCCccccccccccCCCceEeeCcccccCcc--ccccccCCccccChHHhhCCCCCcchhhHHHHHHHH
Confidence 999984221 56799999999986543 2345689999999998875 4688999999999999
Q ss_pred HHHhCCCCCCCCChhHHHHHHHhCCCCCCC----------------CCC------------------------CCCCHHH
Q 008127 307 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRR----------------KPW------------------------PSISNSA 346 (577)
Q Consensus 307 el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~----------------~~~------------------------~~~s~~~ 346 (577)
+|++|..||...+..+....+.......+. ..| ...++++
T Consensus 226 el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (339)
T 1z57_A 226 EYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL 305 (339)
T ss_dssp HHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHH
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHH
Confidence 999999999888776655443221111100 001 1124678
Q ss_pred HHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 347 KDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 347 ~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+||.+||..||.+|||+.++++||||+...
T Consensus 306 ~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 306 FDLIQKMLEYDPAKRITLREALKHPFFDLLK 336 (339)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred HHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence 8999999999999999999999999998753
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-47 Score=388.99 Aligned_cols=267 Identities=24% Similarity=0.408 Sum_probs=220.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchh--------------hHHHHHHHHHHHHHhcCCCCe
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPI--------------AVEDVKREVKILQALAGHENV 159 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~--------------~~~~~~~E~~~l~~l~~hpni 159 (577)
+.++|++.+.||+|+||.||+|.+ +|+.||||++......... ..+.+.+|+.+++++. ||||
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i 105 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NEYC 105 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC-CTTB
T ss_pred ccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC-CCCc
Confidence 456899999999999999999997 8999999998654321111 1277899999999995 9999
Q ss_pred eEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceec
Q 008127 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHR 238 (577)
Q Consensus 160 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHr 238 (577)
+++++++...+.+|+||||+++|+|.+++..... ........+++..++.++.||+.||.|||+ +||+||
T Consensus 106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---------l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~ 176 (348)
T 2pml_X 106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFV---------LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR 176 (348)
T ss_dssp CCCSEEEESSSEEEEEEECCTTCBSSEESSSEES---------SCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECC
T ss_pred ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhh---------hhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeec
Confidence 9999999999999999999999999875210000 000125779999999999999999999999 999999
Q ss_pred cCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC--CCC-CCchhhHHHHHHHHHhCCCCC
Q 008127 239 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGP-ESDVWSIGVITYILLCGRRPF 315 (577)
Q Consensus 239 DlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~-~~DiwSlG~il~el~tg~~Pf 315 (577)
||||+|||++ .++.+||+|||++...... ......||+.|+|||++.+. ++. ++|||||||++|+|++|..||
T Consensus 177 dl~p~Nil~~---~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 252 (348)
T 2pml_X 177 DVKPSNILMD---KNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252 (348)
T ss_dssp CCCGGGEEEC---TTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCChHhEEEc---CCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCC
Confidence 9999999998 4789999999999876443 44566899999999998765 234 899999999999999999999
Q ss_pred CCCCh-hHHHHHHHhCCCCCCCCC---------------CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 316 WDKTE-DGIFKEVLRNKPDFRRKP---------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 316 ~~~~~-~~~~~~i~~~~~~~~~~~---------------~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
..... .+....+......++... .+.+++++.+||.+||+.||.+|||+.++++||||+..
T Consensus 253 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 253 SLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp CCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred CCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 88776 677777766655444211 14688999999999999999999999999999999864
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-46 Score=385.12 Aligned_cols=266 Identities=21% Similarity=0.239 Sum_probs=220.4
Q ss_pred cccceeeeeeecccCCeEEEEEE-----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~-----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
..++|++++.||+|+||.||+|. +..+++.||||++.... .......+.+|+.+++++ +||||+++++++..
T Consensus 69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~ 145 (367)
T 3l9p_A 69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKF-NHQNIVRCIGVSLQ 145 (367)
T ss_dssp CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEec
Confidence 45689999999999999999999 45578899999986432 244556789999999999 59999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+..|+|||||++|+|.+++...... ......+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 146 ~~~~~lv~e~~~~g~L~~~l~~~~~~----------~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~ 215 (367)
T 3l9p_A 146 SLPRFILLELMAGGDLKSFLRETRPR----------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 215 (367)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHSCC----------SSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEES
T ss_pred CCCCEEEEEeCCCCCHHHHHHhhccc----------cCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEe
Confidence 99999999999999999988654110 01225689999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCC---CCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKP---GKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~---~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
..+.+..+||+|||+|+.... ........||+.|+|||++. +.++.++|||||||++|+|++ |..||.+....+.
T Consensus 216 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~ 295 (367)
T 3l9p_A 216 CPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 295 (367)
T ss_dssp CSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred cCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 654566799999999975421 12233457899999999875 456889999999999999998 9999999988888
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
...+..+.... ....+++.+.+||.+||+.||.+|||+.+++++.|+-.
T Consensus 296 ~~~i~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 296 LEFVTSGGRMD---PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp HHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHcCCCCC---CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 88877654322 23568899999999999999999999999999988643
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-46 Score=381.55 Aligned_cols=262 Identities=22% Similarity=0.363 Sum_probs=206.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC--------chhhHHHHHHHHHHHHHhcCCCCeeEEEEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI--------LPIAVEDVKREVKILQALAGHENVVKFYNA 165 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~--------~~~~~~~~~~E~~~l~~l~~hpniv~~~~~ 165 (577)
+.++|++.+.||+|+||.||+|.+.. |+.||||++...... .....+.+.+|+.+++++. ||||++++++
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~ 97 (362)
T 3pg1_A 20 MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH-HPNILGLRDI 97 (362)
T ss_dssp TTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC-CTTBCCCSEE
T ss_pred hccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC-CcCccceeee
Confidence 45689999999999999999999754 999999998653221 1233578999999999995 9999999999
Q ss_pred EEc-----CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccC
Q 008127 166 FED-----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 240 (577)
Q Consensus 166 ~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDl 240 (577)
+.. ...+|+||||++ |+|.+.+.. ....+++..++.++.||+.||.|||++||+||||
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl 160 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHD----------------QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDL 160 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHC----------------TTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHh----------------cccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCC
Confidence 843 447899999997 688776642 2357999999999999999999999999999999
Q ss_pred CCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCC
Q 008127 241 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDK 318 (577)
Q Consensus 241 Kp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~ 318 (577)
||+|||++ .++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.
T Consensus 161 kp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 237 (362)
T 3pg1_A 161 HPGNILLA---DNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237 (362)
T ss_dssp CGGGEEEC---TTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ChHHEEEc---CCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC
Confidence 99999998 478899999999987655555566789999999998864 4688999999999999999999999988
Q ss_pred ChhHHHHHHHhCCC------------------------CCCCCC----CCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 319 TEDGIFKEVLRNKP------------------------DFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 319 ~~~~~~~~i~~~~~------------------------~~~~~~----~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
...+.+..+..... ..+... .+.+++.+.+||.+||..||.+|||+.++|+|
T Consensus 238 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 238 TFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp SHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 87776666543110 111111 24568899999999999999999999999999
Q ss_pred ccccccC
Q 008127 371 PWVREGG 377 (577)
Q Consensus 371 p~f~~~~ 377 (577)
|||+...
T Consensus 318 p~f~~~~ 324 (362)
T 3pg1_A 318 PYFESLF 324 (362)
T ss_dssp GGGTTTC
T ss_pred chhhhcc
Confidence 9999764
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=378.43 Aligned_cols=261 Identities=32% Similarity=0.518 Sum_probs=214.1
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC---
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--- 169 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--- 169 (577)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++.... .......+.+|+.+++.+ +||||+++++++...
T Consensus 8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 84 (353)
T 2b9h_A 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFE 84 (353)
T ss_dssp CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCST
T ss_pred ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--cchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccC
Confidence 35678999999999999999999999999999999986432 244566788999999999 599999999988654
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+|+||||+. |+|.+.+.. ..+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 85 ~~~~~~lv~e~~~-~~L~~~~~~------------------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~ 145 (353)
T 2b9h_A 85 NFNEVYIIQELMQ-TDLHRVIST------------------QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI 145 (353)
T ss_dssp TCCCEEEEECCCS-EEHHHHHHH------------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred ccceEEEEEeccC-ccHHHHHhh------------------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE
Confidence 67999999996 588776531 468999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC-----------CccccccCCccccchhcc--cCCCCCCchhhHHHHHHHHHhCCCC
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK-----------KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRP 314 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~-----------~~~~~~gt~~y~aPE~~~--~~~~~~~DiwSlG~il~el~tg~~P 314 (577)
+ .++.+||+|||++....... .....+||+.|+|||++. ..++.++|||||||++|+|++|+.|
T Consensus 146 ~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p 222 (353)
T 2b9h_A 146 N---SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222 (353)
T ss_dssp C---TTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred c---CCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCC
Confidence 8 47889999999998654221 122457999999999875 3468899999999999999999999
Q ss_pred CCCCChhHHHHHHHhC------------------------CCCCCCC----CCCCCCHHHHHHHHHccccCcCCCCCHHH
Q 008127 315 FWDKTEDGIFKEVLRN------------------------KPDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQ 366 (577)
Q Consensus 315 f~~~~~~~~~~~i~~~------------------------~~~~~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~ 366 (577)
|.+.+..+.+..+... .+.++.. .++.+++++.+||.+||..||.+|||+.+
T Consensus 223 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 302 (353)
T 2b9h_A 223 FPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKE 302 (353)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHH
Confidence 9888766555444321 1111111 12468899999999999999999999999
Q ss_pred HhcCccccccCC
Q 008127 367 ALSHPWVREGGD 378 (577)
Q Consensus 367 il~hp~f~~~~~ 378 (577)
+|+||||+....
T Consensus 303 ll~hp~~~~~~~ 314 (353)
T 2b9h_A 303 ALEHPYLQTYHD 314 (353)
T ss_dssp HHTSGGGTTTCC
T ss_pred HhcCccccccCC
Confidence 999999997654
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=378.48 Aligned_cols=257 Identities=31% Similarity=0.509 Sum_probs=211.5
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe--
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY-- 171 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~-- 171 (577)
+.++|.+.+.||+|+||.||+|+++.+|+.||||++.... ........+.+|+.+++.+. ||||+++++++...+.
T Consensus 22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 99 (353)
T 3coi_A 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASSLR 99 (353)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSGG
T ss_pred cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcC-CCCcccHhheEecccccc
Confidence 4568999999999999999999999999999999986543 23345677899999999994 9999999999987654
Q ss_pred ----EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 172 ----VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 172 ----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
+|+||||+. |+|.+.+ ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~-------------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~ 159 (353)
T 3coi_A 100 NFYDFYLVMPFMQ-TDLQKIM-------------------GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 159 (353)
T ss_dssp GCCCCEEEEECCS-EEGGGTT-------------------TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE
T ss_pred cceeEEEEecccc-CCHHHHh-------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE
Confidence 599999996 5776543 2458999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+ .++.+||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+.
T Consensus 160 ~---~~~~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 234 (353)
T 3coi_A 160 N---EDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 234 (353)
T ss_dssp C---TTCCEEECSTTCTTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHH
T ss_pred C---CCCcEEEeecccccCCCC--CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 8 478899999999986543 2345689999999998865 46889999999999999999999999887766665
Q ss_pred HHHhCC-----------------------CCC----CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 326 EVLRNK-----------------------PDF----RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 326 ~i~~~~-----------------------~~~----~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+.... +.. ....++.+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 235 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 313 (353)
T 3coi_A 235 QILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313 (353)
T ss_dssp HHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence 554310 111 1122356789999999999999999999999999999998653
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=376.19 Aligned_cols=269 Identities=26% Similarity=0.470 Sum_probs=199.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++++ +||||+++++++...+..|+
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCC-CCTTBCCEEEEEESSSCEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEE
Confidence 3579999999999999999999988999999999865432 23456788999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++....... ......+++..++.++.||+.||.|||++||+||||||+||+++ .++
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~---------~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~ 158 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKG---------EHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDG 158 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTT---------TTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTC
T ss_pred EehhccCCchHHHHHHHhhcc---------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEc---CCC
Confidence 999999999999876431110 11245689999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCC------CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 255 SLKATDFGLSDFIKPGK------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||...........
T Consensus 159 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 238 (303)
T 2vwi_A 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 238 (303)
T ss_dssp CEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH
T ss_pred CEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH
Confidence 89999999987654321 1234579999999998864 568999999999999999999999988877766665
Q ss_pred HHhCCCCCCC------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 327 VLRNKPDFRR------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 327 i~~~~~~~~~------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.......... ..+..+++++.+||.+||..||.+|||+.++++||||+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 296 (303)
T 2vwi_A 239 TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN 296 (303)
T ss_dssp HHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred HhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCC
Confidence 5554332211 123567899999999999999999999999999999987543
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=370.55 Aligned_cols=259 Identities=24% Similarity=0.333 Sum_probs=208.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..+|++.+.||+|+||.||+|.+ +|+.||||++..... .....+.+.+|+.+++++. ||||+++++++...+.+++
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLR-HPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSTTCCEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCceEE
Confidence 45899999999999999999975 688999999876543 3445678999999999995 9999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCcEEeecCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~NILl~~~~~ 252 (577)
|||||++|+|.+++.... ....+++..++.++.||+.||.|||++| |+||||||+|||++ .
T Consensus 112 v~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~---~ 174 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSG--------------AREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD---K 174 (309)
T ss_dssp EEECCTTCBHHHHHHSTT--------------HHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEEC---T
T ss_pred EEecCCCCcHHHHHhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEe---C
Confidence 999999999998775321 0123889999999999999999999999 99999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCC-CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 253 DSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
++.+||+|||+++...... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+....+...
T Consensus 175 ~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~ 254 (309)
T 3p86_A 175 KYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254 (309)
T ss_dssp TCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHS
T ss_pred CCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 7899999999997654332 23456899999999998765 588999999999999999999999988888777776544
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc--Ccccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~--hp~f~~~ 376 (577)
..... ....+++++.+||.+||..||.+|||+.++++ .++++..
T Consensus 255 ~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 255 CKRLE--IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CCCCC--CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 33322 23568999999999999999999999999988 5666543
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=366.20 Aligned_cols=261 Identities=25% Similarity=0.458 Sum_probs=220.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE--cCCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE--DDNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~--~~~~~~ 173 (577)
++|++.+.||+|+||.||+|.+..+|+.||+|.+..... .....+.+.+|+.+++++ +||||+++++++. ..+.+|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEE
Confidence 579999999999999999999999999999999976543 234567899999999999 5999999999875 467899
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC-----ceeccCCCCcEEee
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG-----LVHRDMKPENFLFK 248 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~-----iiHrDlKp~NILl~ 248 (577)
+||||+++|+|.+++.... .....+++..++.++.||+.||.|||+.| |+||||||+|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~ 150 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGT-------------KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150 (279)
T ss_dssp EEEECCTTEEHHHHHHHHH-------------HTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEEC
T ss_pred EEEeCCCCCCHHHHHHhhc-------------ccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEc
Confidence 9999999999999886431 12356899999999999999999999999 99999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC-ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..||......+....
T Consensus 151 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 227 (279)
T 2w5a_A 151 ---GKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 227 (279)
T ss_dssp ---SSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred ---CCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHH
Confidence 478899999999987653322 234579999999998875 458889999999999999999999998888877777
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
+..+.... ....+++++.+||.+||..||.+|||+.++++|+|+.+..
T Consensus 228 i~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 228 IREGKFRR---IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp HHHTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred Hhhccccc---CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 77765421 2246789999999999999999999999999999998754
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-46 Score=371.65 Aligned_cols=256 Identities=27% Similarity=0.481 Sum_probs=208.5
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----- 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----- 168 (577)
+.++|++++.||+|+||.||+|++..+|+.||||++... ......+.+|+.+++.+ +||||+++++++..
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchh
Confidence 446899999999999999999999999999999998653 34567789999999999 59999999998864
Q ss_pred --------CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccC
Q 008127 169 --------DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 240 (577)
Q Consensus 169 --------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDl 240 (577)
.+.+|+||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl 142 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSE----------------NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDL 142 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHS----------------CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhcc----------------ccccchHHHHHHHHHHHHHHHHHHhCCeecccC
Confidence 46789999999999999987532 245688899999999999999999999999999
Q ss_pred CCCcEEeecCCCCCCeeEEecCCCcccCCC---------------CCccccccCCccccchhccc--CCCCCCchhhHHH
Q 008127 241 KPENFLFKSAKEDSSLKATDFGLSDFIKPG---------------KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGV 303 (577)
Q Consensus 241 Kp~NILl~~~~~~~~vkl~DFGla~~~~~~---------------~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~ 303 (577)
||+|||++ .++.+||+|||++...... .......||+.|+|||++.+ .++.++|||||||
T Consensus 143 kp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ 219 (303)
T 1zy4_A 143 KPMNIFID---ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGI 219 (303)
T ss_dssp CGGGEEEC---TTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHH
T ss_pred CHHhEEEc---CCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHH
Confidence 99999998 4788999999999865421 12345679999999999874 4688999999999
Q ss_pred HHHHHHhCCCCCCCC-ChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 304 ITYILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 304 il~el~tg~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
++|+|++ ||... ........+......++.......++.+.+||.+||..||.+|||+.++++||||+..
T Consensus 220 il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 220 IFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred HHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 9999998 66433 3344555555555555554455678889999999999999999999999999999753
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=379.60 Aligned_cols=266 Identities=23% Similarity=0.331 Sum_probs=215.8
Q ss_pred ccceeeeeeecccCCeEEEEEEEc-------CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK-------ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 167 (577)
.++|++++.||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++.+.+||||+++++++.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 468999999999999999999875 345679999987543 24456789999999999956999999999999
Q ss_pred cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 168 DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+.+|+|||||++|+|.+++........ .............+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGM-EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccc-cccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE
Confidence 99999999999999999998865421000 00000011123568999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCC---CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDG 322 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~ 322 (577)
+ .++.+||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|||++ |..||.+....+
T Consensus 237 ~---~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~ 313 (370)
T 2psq_A 237 T---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313 (370)
T ss_dssp C---TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred C---CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 8 47899999999998664332 2234567889999998865 46889999999999999999 999999988888
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..+..+... .....+++++.+||.+||..||.+|||+.++++
T Consensus 314 ~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 314 LFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp HHHHHHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 87777665322 223568899999999999999999999999986
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=375.58 Aligned_cols=265 Identities=26% Similarity=0.371 Sum_probs=214.8
Q ss_pred cccccccceeeeeeecccCCeEEEEEEEcCCC-CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCC------eeEE
Q 008127 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN------VVKF 162 (577)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn------iv~~ 162 (577)
....+.++|++.+.||+|+||.||+|.+..++ +.||||++... ....+.+.+|+.+++.+. |++ ++.+
T Consensus 13 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~ 87 (355)
T 2eu9_A 13 IGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIK-EKDKENKFLCVLM 87 (355)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHH-HHCTTSCSCBCCE
T ss_pred cCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHh-hcCCCCceeEEEe
Confidence 34556789999999999999999999998877 68999998653 235677889999999996 555 9999
Q ss_pred EEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCC
Q 008127 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 242 (577)
Q Consensus 163 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp 242 (577)
++++...+.+|+||||+ +++|.+.+... ....+++..++.++.||+.||.|||++||+||||||
T Consensus 88 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~---------------~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp 151 (355)
T 2eu9_A 88 SDWFNFHGHMCIAFELL-GKNTFEFLKEN---------------NFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKP 151 (355)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHT---------------TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCG
T ss_pred eeeeeeCCeEEEEEecc-CCChHHHHHhc---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 99999999999999999 67787766433 235689999999999999999999999999999999
Q ss_pred CcEEeecC----------------CCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHH
Q 008127 243 ENFLFKSA----------------KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVIT 305 (577)
Q Consensus 243 ~NILl~~~----------------~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il 305 (577)
+|||++.. ..++.+||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++
T Consensus 152 ~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 229 (355)
T 2eu9_A 152 ENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE--HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCIL 229 (355)
T ss_dssp GGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred HHEEEecccccccccccccccccccCCCcEEEeecCccccccc--cccCCcCCCcccCCeeeecCCCCCccchHHHHHHH
Confidence 99999432 1468899999999986543 2345689999999998865 568899999999999
Q ss_pred HHHHhCCCCCCCCChhHHHHHHHhCCCCCCC----------------CCC------------------------CCCCHH
Q 008127 306 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRR----------------KPW------------------------PSISNS 345 (577)
Q Consensus 306 ~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~----------------~~~------------------------~~~s~~ 345 (577)
|+|++|..||.+....+....+.......+. ..| ...+.+
T Consensus 230 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 2eu9_A 230 FEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 309 (355)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHH
Confidence 9999999999887776655443322111110 001 112347
Q ss_pred HHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 346 AKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 346 ~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
+.+||.+||..||.+|||+.++|+||||+...
T Consensus 310 l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 310 LFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 341 (355)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred HHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence 88999999999999999999999999999754
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-45 Score=367.64 Aligned_cols=259 Identities=26% Similarity=0.479 Sum_probs=209.6
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcC-CCCeeEEEEEEEcCCe
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG-HENVVKFYNAFEDDNY 171 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~-hpniv~~~~~~~~~~~ 171 (577)
...++|++++.||+|+||.||+|.+. +++.||||++..... .....+.+.+|+.+++++.+ ||||+++++++...+.
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 34567999999999999999999975 588999999876543 24466789999999999964 6999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+||| +.+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 103 ~~lv~e-~~~~~L~~~l~~-----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~--- 161 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKK-----------------KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--- 161 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHH-----------------CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE---
T ss_pred EEEEEe-cCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE---
Confidence 999999 568899887743 36789999999999999999999999999999999999997
Q ss_pred CCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc------------CCCCCCchhhHHHHHHHHHhCCCCCC
Q 008127 252 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFW 316 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~------------~~~~~~DiwSlG~il~el~tg~~Pf~ 316 (577)
++.+||+|||++........ ....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.
T Consensus 162 -~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 240 (313)
T 3cek_A 162 -DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240 (313)
T ss_dssp -TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred -CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchh
Confidence 47899999999987643322 234579999999999864 45778999999999999999999997
Q ss_pred CCCh-hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 317 DKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 317 ~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.... ...+..+........ .....+.++.+||.+||..||.+|||+.++|+||||+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 300 (313)
T 3cek_A 241 QIINQISKLHAIIDPNHEIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300 (313)
T ss_dssp TCCSHHHHHHHHHCTTSCCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred hHHHHHHHHHHHHhcccccC--CcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence 6543 334444444333222 2234678999999999999999999999999999998654
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-45 Score=365.93 Aligned_cols=257 Identities=26% Similarity=0.438 Sum_probs=207.6
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
|.....||+|+||.||+|.+..+++.||||.+.... ....+.+.+|+.+++.+ +||||+++++++...+.+++|||
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEE
Confidence 344458999999999999999999999999987653 23457789999999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
|+++++|.+++... .....+++..++.++.||+.||.|||++||+||||||+|||++. .++.+|
T Consensus 100 ~~~~~~L~~~l~~~--------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~k 163 (295)
T 2clq_A 100 QVPGGSLSALLRSK--------------WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT--YSGVLK 163 (295)
T ss_dssp CCSEEEHHHHHHHT--------------TCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTCCEE
T ss_pred eCCCCCHHHHHHhh--------------ccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC--CCCCEE
Confidence 99999999877543 11245678999999999999999999999999999999999984 367899
Q ss_pred EEecCCCcccCCCC-CccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHhCCCCCCCCChhH-HHHHH-HhCC
Q 008127 258 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEV-LRNK 331 (577)
Q Consensus 258 l~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~-~~~~i-~~~~ 331 (577)
|+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||....... ..... ....
T Consensus 164 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (295)
T 2clq_A 164 ISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKV 243 (295)
T ss_dssp ECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCC
T ss_pred EeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccc
Confidence 99999998764322 23456799999999998643 5789999999999999999999997644332 22121 1111
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.......+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 244 ---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 244 ---HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp ---CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred ---cccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 1122356889999999999999999999999999999998654
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=378.84 Aligned_cols=270 Identities=23% Similarity=0.270 Sum_probs=212.2
Q ss_pred cccceeeeeeecccCCeEEEEEE-----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~-----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
..++|++++.||+|+||.||+|+ +..+++.||||++.... .....+.+.+|+.++.++.+||||+++++++..
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 97 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTK 97 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeeeec
Confidence 34689999999999999999998 55677899999997543 234567799999999999779999999999987
Q ss_pred CC-eEEEEEeccCCCchhHHHHHHhhhhh------------------hhhhHHHh-------------------------
Q 008127 169 DN-YVYIAMELCEGGELLDRILAKMISTT------------------LTSAWFLA------------------------- 204 (577)
Q Consensus 169 ~~-~~~lv~e~~~~g~L~~~l~~~~~~~~------------------~~~~~~~~------------------------- 204 (577)
.+ .+++|||||++|+|.+++........ .+..+...
T Consensus 98 ~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (359)
T 3vhe_A 98 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVE 177 (359)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------
T ss_pred CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhh
Confidence 54 59999999999999998865421000 00000000
Q ss_pred ------hhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC---ccc
Q 008127 205 ------IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQD 275 (577)
Q Consensus 205 ------~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~ 275 (577)
......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++........ ...
T Consensus 178 ~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 254 (359)
T 3vhe_A 178 EEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGD 254 (359)
T ss_dssp ------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCGGGSCTTSCTTCEEC--
T ss_pred hcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCcEEEEeccceeeecccccchhccc
Confidence 00123389999999999999999999999999999999999998 477899999999986643322 235
Q ss_pred cccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHc
Q 008127 276 IVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 353 (577)
Q Consensus 276 ~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~ 353 (577)
..||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+.....+....... ....+++++.++|.+|
T Consensus 255 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~ 332 (359)
T 3vhe_A 255 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR--APDYTTPEMYQTMLDC 332 (359)
T ss_dssp CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC--CCTTCCHHHHHHHHHH
T ss_pred cCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHH
Confidence 678999999998764 46889999999999999998 9999988776555555444333222 2245889999999999
Q ss_pred cccCcCCCCCHHHHhcC
Q 008127 354 LVKDPRARLTAAQALSH 370 (577)
Q Consensus 354 l~~dP~~Rpt~~~il~h 370 (577)
|..||.+|||+.++++|
T Consensus 333 l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 333 WHGEPSQRPTFSELVEH 349 (359)
T ss_dssp TCSSGGGSCCHHHHHHH
T ss_pred ccCChhhCCCHHHHHHH
Confidence 99999999999999875
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=373.21 Aligned_cols=256 Identities=29% Similarity=0.521 Sum_probs=213.6
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch---hhHHHHHHHHHHHHHhc-CCCCeeEEEEEEE
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA-GHENVVKFYNAFE 167 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~---~~~~~~~~E~~~l~~l~-~hpniv~~~~~~~ 167 (577)
..+..+|++.+.||+|+||.||+|.+..+|+.||||++........ .....+.+|+.+++.+. .||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 4466789999999999999999999999999999999876533211 12244678999999996 3799999999999
Q ss_pred cCCeEEEEEeccCC-CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 168 DDNYVYIAMELCEG-GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 168 ~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
..+.+++|||++.+ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~-----------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIl 181 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITER-----------------GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL 181 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred cCCcEEEEEEcCCCCccHHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEE
Confidence 99999999999976 8998877543 67899999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
++. .++.+||+|||++...... ......||+.|+|||++.+.. +.++|||||||++|+|++|+.||....
T Consensus 182 l~~--~~~~~kL~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----- 253 (320)
T 3a99_A 182 IDL--NRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 253 (320)
T ss_dssp EET--TTTEEEECCCTTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----
T ss_pred EeC--CCCCEEEeeCccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-----
Confidence 983 3678999999999876533 344568999999999886543 567899999999999999999995432
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+......+ ...+++++.+||.+||..||.+|||+.++++||||++..
T Consensus 254 -~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 254 -EIIRGQVFF----RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp -HHHHCCCCC----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred -hhhcccccc----cccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 233333222 246889999999999999999999999999999998753
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-45 Score=360.17 Aligned_cols=247 Identities=21% Similarity=0.368 Sum_probs=212.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+. +++.||||++..... ..+.+.+|+.+++++. ||||+++++++.+.+.+|+|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEEE
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc----CHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCceEEE
Confidence 47999999999999999999976 577899999976543 3466899999999995 99999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 84 ~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~ 144 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQ----------------RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQV 144 (269)
T ss_dssp EECCTTCBHHHHHHTT----------------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---GGGC
T ss_pred EEeCCCCcHHHHHHhc----------------CcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc---CCCC
Confidence 9999999999877432 35689999999999999999999999999999999999998 4678
Q ss_pred eeEEecCCCcccCCCC--CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 145 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~ 224 (269)
T 4hcu_A 145 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 224 (269)
T ss_dssp EEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC
T ss_pred EEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCc
Confidence 9999999998654322 2234567889999998874 56889999999999999999 999999988888888877653
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
... ....+++.+.+||.+||..||.+|||+.++++|
T Consensus 225 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 225 RLY---KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp CCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCC---CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 322 224578999999999999999999999999875
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=365.99 Aligned_cols=259 Identities=24% Similarity=0.369 Sum_probs=195.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|.++.+|+.||||++..... .......+..+..+++.+ +||||+++++++...+.+|+|
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEE
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhc-CCCceeeEEEEEecCCcEEEE
Confidence 479999999999999999999999999999999876532 122223333444456666 699999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||+ ++ +...+... ....+++..++.++.||+.||.|||+. ||+||||||+|||++ .++
T Consensus 103 ~e~~-~~-~~~~l~~~---------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~ 162 (318)
T 2dyl_A 103 MELM-GT-CAEKLKKR---------------MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERG 162 (318)
T ss_dssp ECCC-SE-EHHHHHHH---------------HTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEEC---TTS
T ss_pred Eecc-CC-cHHHHHHH---------------hccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEEC---CCC
Confidence 9999 44 44433322 246789999999999999999999995 999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCCCC-ChhHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEV 327 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~~~-~~~~~~~~i 327 (577)
.+||+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|+.||... ...+.+..+
T Consensus 163 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 242 (318)
T 2dyl_A 163 QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV 242 (318)
T ss_dssp CEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH
T ss_pred CEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHH
Confidence 89999999998766555555668999999999984 34578899999999999999999999874 455566666
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
........ +....+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 243 ~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (318)
T 2dyl_A 243 LQEEPPLL-PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYE 291 (318)
T ss_dssp HHSCCCCC-CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHH
T ss_pred hccCCCCC-CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcc
Confidence 66544322 22346889999999999999999999999999999998754
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=357.17 Aligned_cols=248 Identities=25% Similarity=0.362 Sum_probs=212.4
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++.+.||+|+||.||+|.+. ++..||||++..... ..+.+.+|+.+++++. ||||+++++++...+.+|+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 80 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM----SEDEFFQEAQTMMKLS-HPKLVKFYGVCSKEYPIYI 80 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB----CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC----cHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCceEE
Confidence 357999999999999999999865 567899999976543 3466899999999995 9999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++ .++
T Consensus 81 v~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~ 141 (268)
T 3sxs_A 81 VTEYISNGCLLNYLRSH----------------GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVD---RDL 141 (268)
T ss_dssp EEECCTTCBHHHHHHHH----------------GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEEC---TTC
T ss_pred EEEccCCCcHHHHHHHc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEEC---CCC
Confidence 99999999999987543 24589999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||...........+...
T Consensus 142 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~ 221 (268)
T 3sxs_A 142 CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG 221 (268)
T ss_dssp CEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT
T ss_pred CEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC
Confidence 999999999986654332 223456778999999876 45889999999999999999 99999988888887777665
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..... ...+++.+.+||.+||..||.+|||+.+++++
T Consensus 222 ~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 222 HRLYR---PHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp CCCCC---CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred CCCCC---CCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 43322 24578999999999999999999999999875
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-45 Score=369.24 Aligned_cols=265 Identities=22% Similarity=0.326 Sum_probs=199.1
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
..++|++++.||+|+||.||+|.+..++. .||||++..... .....+.+.+|+.+++++ +||||+++++++....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSR 98 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC-
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHC-CCCceehhhceeeccc
Confidence 34589999999999999999999887765 899999875432 234567899999999999 5999999999998776
Q ss_pred eE------EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCc
Q 008127 171 YV------YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 171 ~~------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~N 244 (577)
.. ++||||+++|+|.+++...... .....+++..++.++.||+.||.|||++||+||||||+|
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~-----------~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~N 167 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIG-----------ENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARN 167 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC--------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhcc-----------ccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcce
Confidence 55 9999999999999988654211 112368999999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCC
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKT 319 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~ 319 (577)
||++ .++.+||+|||+|........ .....+|+.|+|||++.+. ++.++|||||||++|+|++ |..||.+..
T Consensus 168 Ili~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 244 (323)
T 3qup_A 168 CMLA---EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244 (323)
T ss_dssp EEEC---TTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred EEEc---CCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC
Confidence 9998 478999999999987644332 2234578899999988754 5889999999999999999 999999988
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC-------HHHHhcCccccccC
Q 008127 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-------AAQALSHPWVREGG 377 (577)
Q Consensus 320 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-------~~~il~hp~f~~~~ 377 (577)
..+....+...... ...+.+++++.+||.+||..||.+||| +++++.|||+....
T Consensus 245 ~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~ 306 (323)
T 3qup_A 245 NAEIYNYLIGGNRL---KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS 306 (323)
T ss_dssp GGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred hHHHHHHHhcCCCC---CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence 88888887765432 223568899999999999999999999 78889999998753
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=364.35 Aligned_cols=252 Identities=24% Similarity=0.379 Sum_probs=205.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+..+++.||||++.......+...+.+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEEEE
Confidence 5799999999999999999999999999999999765444445567899999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 113 ~e~~~~~~L~~~l~~~-----------------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~---~~~~ 172 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ-----------------GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS---ADDF 172 (309)
T ss_dssp EECCCCEEHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSC
T ss_pred EEecCCCCHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEc---CCCC
Confidence 9999999999877543 5689999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCC--CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+...... ...+....
T Consensus 173 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~ 251 (309)
T 2h34_A 173 AYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM-GAHINQAI 251 (309)
T ss_dssp EEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH-HHHHHSCC
T ss_pred EEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH-HHHhccCC
Confidence 9999999997664332 23356799999999988654 58899999999999999999999987765543 34444333
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCC-CHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARL-TAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-t~~~il~ 369 (577)
......++.+|+++.+||.+||..||.+|| |+.++++
T Consensus 252 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 252 PRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp CCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred CCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 333334567899999999999999999999 7777765
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=371.10 Aligned_cols=264 Identities=23% Similarity=0.322 Sum_probs=192.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.++.+|+.||||++..... ......+..|+..+.+..+||||+++++++...+.+|+|
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 579999999999999999999999999999999875432 334456667777444434799999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-CceeccCCCCcEEeecCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||+++ +|.+.+... .......+++..++.++.|++.||.|||+. ||+||||||+|||++ .++
T Consensus 100 ~e~~~~-~l~~~~~~~------------~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~---~~~ 163 (327)
T 3aln_A 100 MELMST-SFDKFYKYV------------YSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD---RSG 163 (327)
T ss_dssp ECCCSE-EHHHHHHHH------------HHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE---TTT
T ss_pred EeecCC-ChHHHHHHH------------HhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc---CCC
Confidence 999975 777766432 111246789999999999999999999998 999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcc-----cCCCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-----RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVL 328 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~ 328 (577)
.+||+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|+.||.+... .+.+..+.
T Consensus 164 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 243 (327)
T 3aln_A 164 NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV 243 (327)
T ss_dssp EEEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCC
T ss_pred CEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHh
Confidence 99999999998776544445558999999999983 3468899999999999999999999976432 12222222
Q ss_pred hCC-CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 329 RNK-PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 329 ~~~-~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+. +.+....+..+++.+.+||.+||..||.+|||+.++++||||....
T Consensus 244 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 293 (327)
T 3aln_A 244 KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE 293 (327)
T ss_dssp CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence 222 1222223356889999999999999999999999999999998654
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=375.17 Aligned_cols=253 Identities=18% Similarity=0.255 Sum_probs=204.9
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+..+|++.+.||+|+||.||+|.+..+|+.||||++..... ...+.+|+.+++.|.+||||+++++++...+..|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 81 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA 81 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence 44689999999999999999999999999999999865432 2347899999999966999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC-
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE- 252 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~- 252 (577)
+||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++..+.
T Consensus 82 lv~e~~-~~~L~~~~~~~----------------~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 144 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLC----------------DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNK 144 (330)
T ss_dssp EEEECC-CCBHHHHHHHT----------------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGT
T ss_pred EEEEeC-CCCHHHHHHHc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCC
Confidence 999999 99999877432 367999999999999999999999999999999999999984211
Q ss_pred -CCCeeEEecCCCcccCCCCC--------ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCCh--
Q 008127 253 -DSSLKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE-- 320 (577)
Q Consensus 253 -~~~vkl~DFGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~-- 320 (577)
...+||+|||+|+....... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+...
T Consensus 145 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~ 224 (330)
T 2izr_A 145 TQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT 224 (330)
T ss_dssp CTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS
T ss_pred CCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc
Confidence 12299999999986543221 2467899999999998764 58899999999999999999999987543
Q ss_pred -hHHHHHHHhCCCCCCCCC-CCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 321 -DGIFKEVLRNKPDFRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 321 -~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+.+..+.......+... ...++ ++.+||..||..||.+||++.++++
T Consensus 225 ~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 225 LKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 334444433222211111 12244 8999999999999999999998876
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=365.11 Aligned_cols=245 Identities=23% Similarity=0.348 Sum_probs=205.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++++ +||||+++++++.+++.+++|
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEEE
Confidence 5799999999999999999999999999999988543 245677899999999999 499999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 86 ~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~---~~~~ 146 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSM----------------DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVR---ENKN 146 (310)
T ss_dssp EECCTTCBHHHHHHHC----------------CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEC---TTSC
T ss_pred EEecCCCcHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEEC---CCCC
Confidence 9999999999877532 36789999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCc---------------cccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKF---------------QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT 319 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~---------------~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~ 319 (577)
+||+|||++......... ...+||+.|+|||++.+. ++.++|||||||++|+|++|..||....
T Consensus 147 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~ 226 (310)
T 3s95_A 147 VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYL 226 (310)
T ss_dssp EEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTS
T ss_pred EEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchh
Confidence 999999999765432211 156799999999998764 5889999999999999999999986533
Q ss_pred hhH-----HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 320 EDG-----IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 320 ~~~-----~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... ......... ..+.+++.+.+||.+||..||.+|||+.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 227 PRTMDFGLNVRGFLDRY------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp CBCTTSSBCHHHHHHHT------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhHHHHhhhhhcccccc------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 211 111111111 12457788999999999999999999999986
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=373.94 Aligned_cols=268 Identities=24% Similarity=0.340 Sum_probs=218.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCC-------CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKAN-------GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~-------~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 166 (577)
..++|.+.+.||+|+||.||+|.+..+ +..||||++.... .......+.+|+.+++++.+||||+++++++
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 346899999999999999999997543 3579999987553 2445678999999999996699999999999
Q ss_pred EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
...+.+|+|||||++|+|.+++....... ....+.........+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPG-LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 223 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSS-SSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccc-cccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEE
Confidence 99999999999999999999886541100 00000000112346999999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCC---CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChh
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTED 321 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~ 321 (577)
++ .++.+||+|||+|+...... ......||+.|+|||++.+. ++.++|||||||++|+|++ |..||.+....
T Consensus 224 l~---~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~ 300 (382)
T 3tt0_A 224 VT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 300 (382)
T ss_dssp EC---TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred Ec---CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 98 47899999999998765432 23345688999999988654 5889999999999999999 99999988888
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 322 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+....+...... .....+++++.+||.+||..||.+|||+.+++++
T Consensus 301 ~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 301 ELFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp HHHHHHHTTCCC---CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCCC---CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 887777665422 2235688999999999999999999999999874
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=360.22 Aligned_cols=253 Identities=22% Similarity=0.318 Sum_probs=206.5
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhh----HHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA----VEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~----~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
..++|++.+.||+|+||.||+|++..+++.||||++.......... .+.+.+|+.+++++ +||||+++++++...
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNP 95 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCC
Confidence 3468999999999999999999999999999999986544322211 16789999999999 599999999999776
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCcEEe
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLF 247 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~NILl 247 (577)
. ++||||+++|+|.+.+.. ....+++..++.++.||+.||.|||++| |+||||||+|||+
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~ 157 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLD----------------KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFL 157 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHC----------------TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEE
T ss_pred C--eEEEEecCCCCHHHHHhc----------------ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEE
Confidence 5 689999999999887643 2457999999999999999999999999 9999999999999
Q ss_pred ecCC--CCCCeeEEecCCCcccCCCCCccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 248 KSAK--EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 248 ~~~~--~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
+..+ ....+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.......
T Consensus 158 ~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 235 (287)
T 4f0f_A 158 QSLDENAPVCAKVADFGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235 (287)
T ss_dssp SCCCTTCSCCEEECCCTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH
T ss_pred eccCCCCceeEEeCCCCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH
Confidence 7421 122499999999975432 3455789999999999843 34778999999999999999999998765444
Q ss_pred H--HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 323 I--FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 323 ~--~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
. ...+..... .......+++++.+||.+||..||.+|||+.++++
T Consensus 236 ~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 236 IKFINMIREEGL--RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp HHHHHHHHHSCC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhccCC--CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 3 333333322 22233568999999999999999999999999986
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=377.96 Aligned_cols=263 Identities=25% Similarity=0.442 Sum_probs=208.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc----------CCCCeeEEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA----------GHENVVKFYN 164 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~----------~hpniv~~~~ 164 (577)
..+|++.+.||+|+||.||+|.+..+|+.||||++.... .....+.+|+.+++++. .||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc----cchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 458999999999999999999999999999999987542 34567889999999885 2899999999
Q ss_pred EEEcCC----eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-Cceecc
Q 008127 165 AFEDDN----YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRD 239 (577)
Q Consensus 165 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~-~iiHrD 239 (577)
++...+ .+++||||+ +++|.+.+... ....+++..++.++.||+.||.|||++ ||+|||
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~D 157 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKY---------------EHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTD 157 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHT---------------TTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSC
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHh---------------hccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence 988644 799999999 89999877543 235689999999999999999999998 999999
Q ss_pred CCCCcEEeecC---CCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCC
Q 008127 240 MKPENFLFKSA---KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPF 315 (577)
Q Consensus 240 lKp~NILl~~~---~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf 315 (577)
|||+|||++.. ...+.+||+|||++..... .....+||+.|+|||++.+. ++.++|||||||++|+|++|..||
T Consensus 158 ikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 235 (373)
T 1q8y_A 158 IKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235 (373)
T ss_dssp CSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC
T ss_pred CChHHeEEeccCCCcCcceEEEcccccccccCC--CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 99999999632 1344799999999987643 23456899999999988764 588999999999999999999999
Q ss_pred CCCC------hhHHHHHHHhCCCCCCC--------------------------------------CCCCCCCHHHHHHHH
Q 008127 316 WDKT------EDGIFKEVLRNKPDFRR--------------------------------------KPWPSISNSAKDFVK 351 (577)
Q Consensus 316 ~~~~------~~~~~~~i~~~~~~~~~--------------------------------------~~~~~~s~~~~~li~ 351 (577)
.+.. ....+..+.......+. ...+.+++++.+||.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 315 (373)
T 1q8y_A 236 EPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLS 315 (373)
T ss_dssp ---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHG
T ss_pred CCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHH
Confidence 7654 22222222211000000 001124567899999
Q ss_pred HccccCcCCCCCHHHHhcCccccccCCC
Q 008127 352 KLLVKDPRARLTAAQALSHPWVREGGDA 379 (577)
Q Consensus 352 ~~l~~dP~~Rpt~~~il~hp~f~~~~~~ 379 (577)
+||+.||.+|||+.++|+||||++....
T Consensus 316 ~~L~~dP~~Rpt~~ell~hp~f~~~~~~ 343 (373)
T 1q8y_A 316 PMLQLDPRKRADAGGLVNHPWLKDTLGM 343 (373)
T ss_dssp GGGCSSTTTCBCHHHHHTCGGGTTCTTC
T ss_pred HHhccCccccCCHHHHhhChhhhcccCc
Confidence 9999999999999999999999986543
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=366.78 Aligned_cols=267 Identities=23% Similarity=0.323 Sum_probs=213.6
Q ss_pred ccceeeeeeecccCCeEEEEEEEc-------CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK-------ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 167 (577)
.++|++.+.||+|+||.||+|.+. .++..||||++.... .......+.+|+.+++++.+||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 468999999999999999999975 467889999987543 24456789999999999966999999999999
Q ss_pred cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 168 DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+.+|+||||+++|+|.+++......... ............+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGME-YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCC-SCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhcccccc-ccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE
Confidence 999999999999999999988643110000 0000000112458999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDG 322 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~ 322 (577)
+ .++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+
T Consensus 191 ~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 267 (334)
T 2pvf_A 191 T---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267 (334)
T ss_dssp C---TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred c---CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH
Confidence 8 478999999999987654322 233467889999998865 45889999999999999999 999999888888
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
....+...... .....+++.+.+||.+||..||.+|||+.+++++
T Consensus 268 ~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 268 LFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp HHHHHHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCCCC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 77777665422 2235688999999999999999999999999863
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=356.27 Aligned_cols=251 Identities=26% Similarity=0.365 Sum_probs=200.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc-hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL-PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~-~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+|++.+.||+|+||.||+|.+. |..||||++....... ....+.+.+|+.+++.+. ||||+++++++...+.+|+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCC-CTTBCCEEEEECCC--CEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcC-CCCEeeEEEEEecCCceEE
Confidence 47999999999999999999864 8899999986543211 234577899999999995 9999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC---ceeccCCCCcEEeecCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAK 251 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~---iiHrDlKp~NILl~~~~ 251 (577)
||||+++++|.+.+ ....+++..++.++.||+.||.|||++| |+||||||+|||++...
T Consensus 84 v~e~~~~~~L~~~~------------------~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~ 145 (271)
T 3dtc_A 84 VMEFARGGPLNRVL------------------SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKV 145 (271)
T ss_dssp EEECCTTEEHHHHH------------------TSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCC
T ss_pred EEEcCCCCCHHHHh------------------hcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccc
Confidence 99999999997755 2367899999999999999999999999 99999999999998422
Q ss_pred -----CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 252 -----EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 252 -----~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||++....... .....||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+........
T Consensus 146 ~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~ 224 (271)
T 3dtc_A 146 ENGDLSNKILKITDFGLAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY 224 (271)
T ss_dssp SSSCCSSCCEEECCCCC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH
T ss_pred ccccccCcceEEccCCccccccccc-ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 16789999999998665433 2356899999999988754 5889999999999999999999999888777777
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+........ ....+++.+.+||.+||..||.+|||+.+++++
T Consensus 225 ~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 225 GVAMNKLALP--IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp HHHTSCCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhcCCCCCC--CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 7666544333 235688999999999999999999999999874
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-45 Score=364.11 Aligned_cols=255 Identities=20% Similarity=0.309 Sum_probs=209.3
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++.... ....+.+|+.+++.+.+||||+++++++......
T Consensus 7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~ 81 (298)
T 1csn_A 7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHN 81 (298)
T ss_dssp EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEE
T ss_pred ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCcee
Confidence 35568999999999999999999999999999999986543 2234788999999997799999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC-
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK- 251 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~- 251 (577)
|+||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 82 ~lv~e~~-~~~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~ 144 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLC----------------GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS 144 (298)
T ss_dssp EEEEECC-CCBHHHHHHHT----------------TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS
T ss_pred EEEEEec-CCCHHHHHHHh----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCC
Confidence 9999999 99999877532 34689999999999999999999999999999999999998421
Q ss_pred -CCCCeeEEecCCCcccCCCC--------CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCC--
Q 008127 252 -EDSSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT-- 319 (577)
Q Consensus 252 -~~~~vkl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~-- 319 (577)
....+||+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+..
T Consensus 145 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 224 (298)
T 1csn_A 145 KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 224 (298)
T ss_dssp TTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC
T ss_pred CCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc
Confidence 23449999999998765432 23456799999999998764 5889999999999999999999998743
Q ss_pred -hhHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 320 -EDGIFKEVLRNKPDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 320 -~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
....+..+.......+ ....+.+++++.+||.+||..||.+|||+.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 225 TNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp CHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred ccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 3344444433221111 1112468899999999999999999999999875
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-45 Score=376.89 Aligned_cols=250 Identities=23% Similarity=0.341 Sum_probs=211.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|.+.+.||+|+||.||+|.++.+++.||||++.... .......+.+|+.+++++ +||||+++++++...+.+|+
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEE
Confidence 358999999999999999999999999999999986442 234456788999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 190 v~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~---~~~ 250 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTE----------------GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKN 250 (377)
T ss_dssp EEECCTTCBHHHHHHHH----------------GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTC
T ss_pred EEEcCCCCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEc---CCC
Confidence 99999999999987543 24588999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCc---cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 255 SLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
.+||+|||+++........ ....+|+.|+|||++.+ .++.++|||||||++|||++ |..||.+....+....+..
T Consensus 251 ~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~ 330 (377)
T 3cbl_A 251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK 330 (377)
T ss_dssp CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHT
T ss_pred cEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 9999999999865432111 12245778999998864 46889999999999999998 9999998888777666655
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+.. . .....+++++.+||.+||..||.+|||+.++++
T Consensus 331 ~~~-~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 331 GGR-L--PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp TCC-C--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCC-C--CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 432 1 223457899999999999999999999999875
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=358.51 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=209.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++++.||+|+||.||+|.+. ++..||||++..... ..+.+.+|+.+++.+. ||||+++++++...+.+|+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC----CHHHHHHHHHHHhcCC-CCCEeeEEEEEecCCCeEE
Confidence 458999999999999999999875 677899999976543 3466889999999995 9999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 97 v~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~---~~~ 157 (283)
T 3gen_A 97 ITEYMANGCLLNYLREM----------------RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQG 157 (283)
T ss_dssp EECCCTTCBHHHHHHCG----------------GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTS
T ss_pred EEeccCCCcHHHHHHHh----------------ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEc---CCC
Confidence 99999999999877432 25689999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCC--CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.+||+|||++....... ......+|+.|+|||++.+ .++.++|||||||++|+|++ |+.||......+....+...
T Consensus 158 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~ 237 (283)
T 3gen_A 158 VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237 (283)
T ss_dssp CEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT
T ss_pred CEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc
Confidence 89999999998664321 1233457888999998864 56889999999999999998 99999988888888777765
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..... ...+++.+.+||.+||..||.+|||+.++++|
T Consensus 238 ~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 238 LRLYR---PHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp CCCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred cCCCC---CCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 43222 24578999999999999999999999999875
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=362.68 Aligned_cols=269 Identities=25% Similarity=0.288 Sum_probs=214.5
Q ss_pred ccceeeeeeecccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|++.+.||+|+||.||+|.+ ..+++.||||++..... ....+.+.+|+.+++++.+||||+++++++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh--HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 35899999999999999999985 45778999999875532 345678999999999996699999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhh-hhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLT-SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
+..++|||||++|+|.+++.......... ............+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT 179 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEc
Confidence 99999999999999999886542110000 00000011234689999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
.++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+......
T Consensus 180 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 180 ---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp ---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred ---CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 478899999999987654432 234567889999998764 46889999999999999999 9999988776665
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
....+....... ....+++.+.+||.+||..||.+|||+.+++++
T Consensus 257 ~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 257 FYKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp HHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhccCCCCC--CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 555554433222 235688999999999999999999999999863
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=380.89 Aligned_cols=264 Identities=28% Similarity=0.461 Sum_probs=200.2
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
..+.+.|.+.+.||+|+||+||.+. ..+|+.||||++... ..+.+.+|+.+++.+.+||||+++++++...+.
T Consensus 11 ~~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~ 83 (434)
T 2rio_A 11 QSLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRF 83 (434)
T ss_dssp CSCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred hhhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCe
Confidence 4456678889999999999998754 568999999998643 235678999999987679999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC-
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA- 250 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~- 250 (577)
+|||||||. |+|.+++........ .....++..++.++.||+.||.|||++||+||||||+|||++..
T Consensus 84 ~~lv~E~~~-gsL~~~l~~~~~~~~----------~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~ 152 (434)
T 2rio_A 84 LYIALELCN-LNLQDLVESKNVSDE----------NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSS 152 (434)
T ss_dssp EEEEECCCS-EEHHHHHHTC----------------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCH
T ss_pred EEEEEecCC-CCHHHHHhccCCCch----------hhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCc
Confidence 999999995 699988754311000 00112344567899999999999999999999999999999742
Q ss_pred ---------CCCCCeeEEecCCCcccCCCCC-----ccccccCCccccchhccc--------CCCCCCchhhHHHHHHHH
Q 008127 251 ---------KEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYIL 308 (577)
Q Consensus 251 ---------~~~~~vkl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~--------~~~~~~DiwSlG~il~el 308 (577)
..+..+||+|||+|........ ....+||+.|+|||++.+ .++.++|||||||++|+|
T Consensus 153 ~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~el 232 (434)
T 2rio_A 153 RFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232 (434)
T ss_dssp HHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHH
T ss_pred ccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHH
Confidence 1356899999999987654321 234689999999998854 357889999999999999
Q ss_pred Hh-CCCCCCCCChhHHHHHHHhCCCCCCCCC---CCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 309 LC-GRRPFWDKTEDGIFKEVLRNKPDFRRKP---WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 309 ~t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~---~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
++ |..||.+....+ ..++.+........ ...+++++.+||.+||+.||.+|||+.++++||||..
T Consensus 233 lt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 233 LSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp HTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred HhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence 99 999997654433 34444443332211 1234578999999999999999999999999999975
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=369.17 Aligned_cols=271 Identities=23% Similarity=0.283 Sum_probs=212.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|++.+.||+|+||.||+|.+. .++..||||++..... ....+.+.+|+.++.++.+||||+++++++...
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 468999999999999999999973 4567899999875421 234567899999999996699999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhh------HHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCC
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSA------WFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 243 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~ 243 (577)
+.+|+|||||++|+|.+++............ ..........+++..++.++.||+.||.|||++||+||||||+
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~ 201 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 201 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence 9999999999999999988643110000000 0000001245899999999999999999999999999999999
Q ss_pred cEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCC
Q 008127 244 NFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDK 318 (577)
Q Consensus 244 NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~ 318 (577)
|||++ .++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.
T Consensus 202 NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 202 NVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp GEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred hEEEc---CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 99998 478999999999987643322 234568889999998764 56889999999999999998 99999888
Q ss_pred ChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 319 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 319 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
.....+..++....... ....+++++.+||.+||..||.+|||+.++++|..
T Consensus 279 ~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 279 PVDANFYKLIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp CCSHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CcHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 77666666665543322 23457899999999999999999999999998654
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=357.19 Aligned_cols=250 Identities=22% Similarity=0.318 Sum_probs=215.4
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
...+|++.+.||+|+||.||+|.+..++..||||++.... ...+.+.+|+.+++++. ||||+++++++...+.+|
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS----THHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH----HHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCCEE
Confidence 4568999999999999999999999999999999987543 35677899999999995 999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+||+++ .+
T Consensus 86 ~v~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~ 147 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLREC---------------NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---EN 147 (288)
T ss_dssp EEEECCTTEEHHHHHHHC---------------CTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC---GG
T ss_pred EEEEcCCCCcHHHHHHhc---------------ccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc---CC
Confidence 999999999999877542 335689999999999999999999999999999999999998 46
Q ss_pred CCeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
+.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+..
T Consensus 148 ~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~ 227 (288)
T 3kfa_A 148 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227 (288)
T ss_dssp GCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT
T ss_pred CCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc
Confidence 7899999999987654332 234567889999998864 56889999999999999999 9999988888777776655
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... ......+++.+.+||.+||..||.+|||+.++++
T Consensus 228 ~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 228 DYR---MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp TCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCC---CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 422 2223568899999999999999999999999965
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-44 Score=358.61 Aligned_cols=256 Identities=26% Similarity=0.451 Sum_probs=201.6
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..+|++.+.||+|+||.||+|.+..+|+.||||++.............+.+|+.+++.+ +||||+++++++...+.+++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEEE
Confidence 35799999999999999999999999999999999765544456678899999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++|+|.+++... ......+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 110 v~e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~---~~~ 173 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHF-------------KKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATG 173 (310)
T ss_dssp EEECCCSCBHHHHHHHH-------------HHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTS
T ss_pred EEecCCCCCHHHHHHHh-------------cccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEc---CCC
Confidence 99999999999877532 12346789999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~--~~~~~~i~~~ 330 (577)
.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ......+...
T Consensus 174 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 253 (310)
T 2wqm_A 174 VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC 253 (310)
T ss_dssp CEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTT
T ss_pred CEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcc
Confidence 89999999998664332 2335679999999998865 458899999999999999999999976532 3344444433
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
. ++......+++++.+||.+||..||.+|||+.++++
T Consensus 254 ~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 254 D--YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp C--SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred c--CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 2 222333568899999999999999999999999876
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=362.23 Aligned_cols=267 Identities=24% Similarity=0.295 Sum_probs=214.8
Q ss_pred ccceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|.+.+.||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++.+ +||||+++++++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQD 98 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecC
Confidence 468999999999999999999873 456899999987543 244567899999999999 599999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhh-------hhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCC
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTL-------TSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 242 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp 242 (577)
+.+|+||||+++|+|.+++......... .............+++..++.++.||+.||.|||++||+||||||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp 178 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAA 178 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccch
Confidence 9999999999999999988654210000 000000011224589999999999999999999999999999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCC
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWD 317 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~ 317 (577)
+|||++ .++.+||+|||++........ .....+|+.|+|||++.+. ++.++|||||||++|+|++ |..||.+
T Consensus 179 ~NIli~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 179 RNILVA---EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp GGEEEE---TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred heEEEc---CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999998 477899999999986643322 2344678899999988654 5889999999999999999 9999998
Q ss_pred CChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 318 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 318 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.........+...... .....+++.+.+||.+||..||.+|||+.+++++
T Consensus 256 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 256 IPPERLFNLLKTGHRM---ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp CCGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHhhcCCcC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 8888777766654322 2235689999999999999999999999999874
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=356.75 Aligned_cols=250 Identities=23% Similarity=0.333 Sum_probs=200.3
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
..++|++.+.||+|+||.||+|.+..+ +..||+|.+.... .....+.+.+|+.+++++ +||||+++++++. ++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~ 88 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-EN 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SS
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCccceEEEEEc-cC
Confidence 346899999999999999999998654 4579999886542 244567899999999999 5999999999985 45
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~- 151 (281)
T 1mp8_A 89 PVWIIMELCTLGELRSFLQVR----------------KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS- 151 (281)
T ss_dssp SCEEEEECCTTEEHHHHHHHT----------------TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE-
T ss_pred ccEEEEecCCCCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECC-
Confidence 689999999999999877432 346899999999999999999999999999999999999984
Q ss_pred CCCCCeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....
T Consensus 152 --~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~ 229 (281)
T 1mp8_A 152 --NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 229 (281)
T ss_dssp --TTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH
T ss_pred --CCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHH
Confidence 68899999999987654332 223457889999998864 46889999999999999997 9999998888888877
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+...... ...+.+++.+.+||.+||..||.+|||+.++++
T Consensus 230 i~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 230 IENGERL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp HHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHcCCCC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 7665422 223568999999999999999999999999876
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=358.38 Aligned_cols=247 Identities=29% Similarity=0.566 Sum_probs=197.0
Q ss_pred cccceeee-eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----
Q 008127 94 FDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED---- 168 (577)
Q Consensus 94 ~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~---- 168 (577)
+.++|.+. +.||+|+||.||+|.+..+|+.||||++... ..+.+|+.++.++.+||||+++++++..
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 44568777 7899999999999999999999999998542 3467899988666689999999999876
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...+|+|||||++|+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~ 151 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDR---------------GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHC---------------TTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEES
T ss_pred CceEEEEEeecCCCcHHHHHHhc---------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEe
Confidence 67899999999999999877543 235799999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
..+.++.+||+|||++..... ..++.++|||||||++|+|++|..||.+.........+.
T Consensus 152 ~~~~~~~~kl~Dfg~a~~~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~ 211 (299)
T 3m2w_A 152 SKRPNAILKLTDFGFAKETTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 211 (299)
T ss_dssp SSSTTCCEEECCCTTCEECTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSC
T ss_pred cCCCCCcEEEecccccccccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHH
Confidence 644478899999999865431 224668999999999999999999997765443322111
Q ss_pred h----CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCCc
Q 008127 329 R----NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383 (577)
Q Consensus 329 ~----~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~~ 383 (577)
. ....++...+..+++++.+||.+||..||.+|||+.++++||||+........+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~~ 270 (299)
T 3m2w_A 212 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 270 (299)
T ss_dssp CSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCCB
T ss_pred HHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccCCCCC
Confidence 1 111111112246889999999999999999999999999999999876544443
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-45 Score=379.58 Aligned_cols=260 Identities=23% Similarity=0.397 Sum_probs=210.9
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC--
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-- 170 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-- 170 (577)
.+.++|++.+.||+|+||.||+|++..+|+.||||++..... ....+.+.+|+.+++++. ||||+++++++...+
T Consensus 6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 82 (396)
T 4eut_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTR 82 (396)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTC
T ss_pred CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCCCCeEEEeeccCCCC
Confidence 355789999999999999999999999999999999875432 224567789999999995 999999999998754
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec-
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS- 249 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~- 249 (577)
.+|+|||||++|+|.+++... .....+++..++.++.||+.||.|||++||+||||||+|||+..
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~--------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~ 148 (396)
T 4eut_A 83 HKVLIMEFCPCGSLYTVLEEP--------------SNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIG 148 (396)
T ss_dssp CEEEEECCCTTEEHHHHTTSG--------------GGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEEC
T ss_pred eeEEEEecCCCCCHHHHHHhh--------------hcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeec
Confidence 789999999999998876432 12234899999999999999999999999999999999999832
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc---------CCCCCCchhhHHHHHHHHHhCCCCCCC---
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCGRRPFWD--- 317 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~DiwSlG~il~el~tg~~Pf~~--- 317 (577)
.+.++.+||+|||+|+...........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||..
T Consensus 149 ~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 228 (396)
T 4eut_A 149 EDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228 (396)
T ss_dssp TTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTC
T ss_pred CCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc
Confidence 12456799999999988766555667789999999998753 346789999999999999999999964
Q ss_pred -CChhHHHHHHHhCCCCCCC-----------------CCC----CCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 318 -KTEDGIFKEVLRNKPDFRR-----------------KPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 318 -~~~~~~~~~i~~~~~~~~~-----------------~~~----~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
....+.+..++.+.+.... +.. ..+++.+.++|.+||..||++|||+.++++
T Consensus 229 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 229 PRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp TTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred ccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence 3345566667665542110 000 123457889999999999999999999754
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=365.87 Aligned_cols=266 Identities=21% Similarity=0.251 Sum_probs=216.0
Q ss_pred cccceeeeeeecccCCeEEEEEE-----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~-----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
..++|++++.||+|+||.||+|+ +..+++.||||++.... .......+.+|+.+++++ +||||+++++++..
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~ 104 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKF-NHQNIVRCIGVSLQ 104 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcC
Confidence 45689999999999999999998 55678899999986432 244566789999999999 59999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+.+|+|||||++|+|.+++...... ......+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 105 ~~~~~lv~e~~~~~~L~~~l~~~~~~----------~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~ 174 (327)
T 2yfx_A 105 SLPRFILMELMAGGDLKSFLRETRPR----------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 174 (327)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTSCC----------SSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEES
T ss_pred CCCcEEEEecCCCCcHHHHHHhhccc----------ccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEe
Confidence 99999999999999999988654110 01124589999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCC---CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
..+.+..+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+.
T Consensus 175 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 254 (327)
T 2yfx_A 175 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 254 (327)
T ss_dssp CSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred cCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHH
Confidence 65456689999999987543222 2234578999999998764 56889999999999999998 9999988888877
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
...+...... .....+++.+.+||.+||..||.+|||+.+++++.|+-.
T Consensus 255 ~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 255 LEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhcCCCC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 7777665432 223568899999999999999999999999999988653
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=359.75 Aligned_cols=247 Identities=15% Similarity=0.216 Sum_probs=204.9
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCC-------CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANG-------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 166 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~-------~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 166 (577)
..++|++.+.||+|+||.||+|.+..++ ..||+|++.... ....+.+.+|+.+++.+. ||||+++++++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~ 81 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKLS-HKHLVLNYGVC 81 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTSC-CTTBCCEEEEE
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhCC-CCCEeEEEEEE
Confidence 3468999999999999999999998877 479999986543 345678999999999995 99999999999
Q ss_pred EcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 167 EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 167 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
...+..|+|||||++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 82 ~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIl 145 (289)
T 4fvq_A 82 VCGDENILVQEFVKFGSLDTYLKKN----------------KNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNIL 145 (289)
T ss_dssp CCTTCCEEEEECCTTCBHHHHHHHT----------------GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred EeCCCCEEEEECCCCCCHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEE
Confidence 9999999999999999999987543 234899999999999999999999999999999999999
Q ss_pred eecCCCCCC--------eeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCC
Q 008127 247 FKSAKEDSS--------LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFW 316 (577)
Q Consensus 247 l~~~~~~~~--------vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~ 316 (577)
++. ++. +||+|||++..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..|+.
T Consensus 146 l~~---~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~ 219 (289)
T 4fvq_A 146 LIR---EEDRKTGNPPFIKLSDPGISITVLP---KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL 219 (289)
T ss_dssp EEE---CCBGGGTBCCEEEECCCCSCTTTSC---HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred Eec---CCcccccccceeeeccCcccccccC---ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCc
Confidence 985 333 99999999976532 234568999999998874 46889999999999999999665555
Q ss_pred CCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 317 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 317 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..........+.......+ ...++++.+||.+||..||.+|||+.++++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 220 SALDSQRKLQFYEDRHQLP----APKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp TTSCHHHHHHHHHTTCCCC----CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cccchHHHHHHhhccCCCC----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 5444444444444433333 3457789999999999999999999999884
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=365.36 Aligned_cols=256 Identities=27% Similarity=0.513 Sum_probs=203.6
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch---hhHHHHHHHHHHHHHhc---CCCCeeEEEEE
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA---GHENVVKFYNA 165 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~---~~~~~~~~E~~~l~~l~---~hpniv~~~~~ 165 (577)
..+.++|++.+.||+|+||.||+|.+..+|+.||||++........ .....+.+|+.++.++. +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 4466789999999999999999999999999999999876543211 12234567999999884 49999999999
Q ss_pred EEcCCeEEEEEec-cCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCc
Q 008127 166 FEDDNYVYIAMEL-CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 166 ~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~N 244 (577)
+...+..++|||| +.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N 169 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEK-----------------GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDEN 169 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGG
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhh
Confidence 9999999999999 7899999887543 568999999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCC--CCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
|+++. .++.+||+|||++...... ......||+.|+|||++.+.. +.++|||||||++|+|++|+.||....
T Consensus 170 il~~~--~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--- 243 (312)
T 2iwi_A 170 ILIDL--RRGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--- 243 (312)
T ss_dssp EEEET--TTTEEEECCCSSCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---
T ss_pred EEEeC--CCCeEEEEEcchhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH---
Confidence 99983 3678999999999876543 345668999999999886543 348999999999999999999996431
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+......+ ...++..+.+||.+||..||.+|||+.++++||||+...
T Consensus 244 ---~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~ 291 (312)
T 2iwi_A 244 ---EILEAELHF----PAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291 (312)
T ss_dssp ---HHHHTCCCC----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred ---HHhhhccCC----cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence 233333322 246889999999999999999999999999999999754
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=367.38 Aligned_cols=266 Identities=20% Similarity=0.239 Sum_probs=214.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|++++.||+|+||.||+|++. .+++.||||++.... .....+.+.+|+.+++.+ +||||+++++++...
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DNPNIVKLLGVCAVG 122 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSS
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccC
Confidence 468999999999999999999987 456899999987543 234567899999999999 599999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhh-------hhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCC
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTT-------LTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 242 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp 242 (577)
+.+|+||||+++|+|.+++........ ..............+++..++.++.||+.||.|||++||+||||||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp 202 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT 202 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCc
Confidence 999999999999999998865311000 0000000011126799999999999999999999999999999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCCCC---CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCC
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWD 317 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~ 317 (577)
+|||++ .++.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+
T Consensus 203 ~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 203 RNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp GGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ceEEEC---CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 999998 47789999999997653221 2234578999999998764 56889999999999999999 9999999
Q ss_pred CChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 318 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 318 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
....+....+..+.... ....+++.+.+||.+||..||.+|||+.++++
T Consensus 280 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~ 328 (343)
T 1luf_A 280 MAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHR 328 (343)
T ss_dssp SCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CChHHHHHHHhCCCcCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 88888887777654322 22468899999999999999999999999976
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=364.65 Aligned_cols=250 Identities=22% Similarity=0.297 Sum_probs=202.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEE----EEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~v----aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.++|++.+.||+|+||.||+|++..+|+.+ |+|.+.... .......+.+|+.+++++ +||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTST 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESSS
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCC
Confidence 357999999999999999999998887754 777765432 233567899999999999 5999999999998765
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.++|+||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~- 152 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREH----------------KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT- 152 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHS----------------TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE-
T ss_pred -eEEEEEecCCCcHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECC-
Confidence 78899999999999877542 367899999999999999999999999999999999999984
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
++.+||+|||+|+....... .....||+.|+|||++.+ .++.++|||||||++|+|++ |+.||.+....+...
T Consensus 153 --~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 230 (327)
T 3poz_A 153 --PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 230 (327)
T ss_dssp --TTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH
T ss_pred --CCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH
Confidence 78899999999986643322 223457889999998765 46889999999999999999 999998888777766
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+..... .. ..+.++..+.+|+.+||+.||.+|||+.+++++
T Consensus 231 ~~~~~~~-~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 231 ILEKGER-LP--QPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp HHHTTCC-CC--CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred HHHcCCC-CC--CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 6655432 12 235678999999999999999999999999874
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=365.56 Aligned_cols=266 Identities=24% Similarity=0.329 Sum_probs=213.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEE--EEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRV--AVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~v--aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
++|++.+.||+|+||.||+|++..+|..+ |||.+.... .......+.+|+.+++++.+||||+++++++...+.+|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 57999999999999999999999998865 999886432 23345678999999999966999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||+++|+|.+++........ ...+.........+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---~~ 178 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLET-DPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---EN 178 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHH-CHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GG
T ss_pred EEEecCCCCCHHHHHHhcccccc-cccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEc---CC
Confidence 99999999999998864321110 011111122346799999999999999999999999999999999999998 46
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+.+||+|||++.............+|+.|+|||++.+. ++.++|||||||++|+|++ |..||.+....+....+..+.
T Consensus 179 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~ 258 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 258 (327)
T ss_dssp GCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC
T ss_pred CeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCC
Confidence 78999999999754433333445678899999988754 5889999999999999998 999999988887777766542
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
. ......+++.+.+||.+||..||.+|||+.+++++
T Consensus 259 ~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 259 R---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp C---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred C---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2 12235688999999999999999999999999874
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=358.98 Aligned_cols=250 Identities=22% Similarity=0.323 Sum_probs=200.3
Q ss_pred cccceeeeeeecccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED- 168 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~- 168 (577)
..++|++++.||+|+||.||+|+ +..+++.||||++.... ....+.+.+|+.+++++. ||||+++++++..
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 83 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA 83 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC---HHHHHHHHHHHHHHHTCC-CTTBCCEEEEECHH
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC---HHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC
Confidence 34689999999999999999998 56789999999987543 345678999999999995 9999999999864
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
...+++|||||++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 84 ~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~ 147 (295)
T 3ugc_A 84 GRRNLKLIMEYLPYGSLRDYLQKH----------------KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147 (295)
T ss_dssp HHTSCEEEEECCTTCBHHHHHHHC----------------GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CCCceEEEEEeCCCCCHHHHHHhc----------------ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEE
Confidence 45689999999999999987543 2358999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh-
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED- 321 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~- 321 (577)
+. ++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..||......
T Consensus 148 ~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~ 224 (295)
T 3ugc_A 148 EN---ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 224 (295)
T ss_dssp EE---TTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHH
T ss_pred cC---CCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHH
Confidence 84 68899999999987654322 223457888999998864 4688999999999999999999998543211
Q ss_pred ---------------HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 322 ---------------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 322 ---------------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.....+ ..... ......+++++.+||.+||..||.+|||+.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 225 MRMIGNDKQGQMIVFHLIELL-KNNGR--LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHHHCTTCCTHHHHHHHHHHH-HTTCC--CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhhhcCccccchhHHHHHHHH-hccCc--CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 111122 22222 2223568899999999999999999999999875
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=357.12 Aligned_cols=251 Identities=26% Similarity=0.451 Sum_probs=211.5
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-- 168 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-- 168 (577)
.+.+..+|++.+.||+|+||.||+|.+..+|+.||||++.... ..+.+|+.+++.+ +||||+++++++..
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 77 (284)
T 2a19_B 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKL-DHVNIVHYNGCWDGFD 77 (284)
T ss_dssp CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHC-CCTTBCCEEEEEEEEE
T ss_pred cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhC-CCCCEEEEeeeEeccc
Confidence 4456778999999999999999999999999999999986543 2467899999999 59999999998864
Q ss_pred --------------CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 008127 169 --------------DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 234 (577)
Q Consensus 169 --------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~ 234 (577)
...+|+||||+++|+|.+++... ....+++..++.++.||+.||.|||++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 142 (284)
T 2a19_B 78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR---------------RGEKLDKVLALELFEQITKGVDYIHSKK 142 (284)
T ss_dssp EC---------CCEEEEEEEEECCCCSCBHHHHHHHG---------------GGSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCcccccccccccCcceEEEEEeccCCCCHHHHHhhc---------------cCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 45689999999999999987543 2357899999999999999999999999
Q ss_pred ceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCC
Q 008127 235 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 235 iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~ 313 (577)
|+||||||+|||++. ++.+||+|||++.............||+.|+|||++.+. ++.++|||||||++|+|++|..
T Consensus 143 i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~ 219 (284)
T 2a19_B 143 LINRDLKPSNIFLVD---TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD 219 (284)
T ss_dssp EECSCCSGGGEEEEE---TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCS
T ss_pred eeeccCCHHHEEEcC---CCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCC
Confidence 999999999999984 778999999999877655555567899999999988754 5889999999999999999999
Q ss_pred CCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 314 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 314 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
||... ......+..... ...+++.+.+||.+||..||.+|||+.++++|+|.-.
T Consensus 220 ~~~~~--~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 220 TAFET--SKFFTDLRDGII------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp SHHHH--HHHHHHHHTTCC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred cchhH--HHHHHHhhcccc------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 97432 223333333211 2457899999999999999999999999999988654
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=359.11 Aligned_cols=268 Identities=19% Similarity=0.266 Sum_probs=220.2
Q ss_pred ccccceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 167 (577)
...++|++.+.||+|+||.||+|.+. .+++.||||.+.... .......+.+|+.+++.+ +||||+++++++.
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVS 98 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGC-CCTTBCCEEEEEC
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEc
Confidence 34568999999999999999999876 467899999987543 234556789999999999 5999999999999
Q ss_pred cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 168 DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+..|+|||||++|+|.+++....... ........+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~-------~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli 171 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAM-------ANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV 171 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHH-------HHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhh-------ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEE
Confidence 9999999999999999999886542110 000112567899999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDG 322 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~ 322 (577)
+ .++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+
T Consensus 172 ~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 248 (322)
T 1p4o_A 172 A---EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248 (322)
T ss_dssp C---TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH
T ss_pred c---CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH
Confidence 8 478999999999986543221 234467899999998865 46889999999999999999 899999888888
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC------cccccc
Q 008127 323 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH------PWVREG 376 (577)
Q Consensus 323 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h------p~f~~~ 376 (577)
....+...... .....+++.+.+||.+||..||.+|||+.+++++ +||++.
T Consensus 249 ~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~ 305 (322)
T 1p4o_A 249 VLRFVMEGGLL---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305 (322)
T ss_dssp HHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHH
T ss_pred HHHHHHcCCcC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCccc
Confidence 87777665432 1235688999999999999999999999999986 565543
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-45 Score=381.52 Aligned_cols=255 Identities=26% Similarity=0.427 Sum_probs=196.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.+|.+.+.||+|+||+||. ....+|+.||||++..... ..+.+|+.+|+.+.+|||||++++++.+...+|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 3699999999999999764 3357899999999865432 22568999999996699999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC--CC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--ED 253 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~--~~ 253 (577)
||||. |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++..+ ..
T Consensus 97 ~E~~~-g~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~ 159 (432)
T 3p23_A 97 IELCA-ATLQEYVEQK----------------DFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGK 159 (432)
T ss_dssp EECCS-EEHHHHHHSS----------------SCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTB
T ss_pred EECCC-CCHHHHHHhc----------------CCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCc
Confidence 99995 6998877432 23455566789999999999999999999999999999996422 23
Q ss_pred CCeeEEecCCCcccCCCC----CccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 254 SSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
..+||+|||+|+...... .....+||+.|+|||++.+ .++.++|||||||++|+|++ |..||.........
T Consensus 160 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~ 239 (432)
T 3p23_A 160 IKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239 (432)
T ss_dssp CCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH
T ss_pred eeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH
Confidence 467899999998765332 2345689999999999863 34678999999999999999 99999655443332
Q ss_pred HHHHhCCCCCCC-CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 325 KEVLRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 325 ~~i~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+.. ...... ......+..+.+||.+||+.||.+|||+.++++||||...
T Consensus 240 -~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 240 -ILLG-ACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp -HHTT-CCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred -HHhc-cCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 2222 222111 1112245568999999999999999999999999999763
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=380.25 Aligned_cols=249 Identities=22% Similarity=0.323 Sum_probs=214.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
..+|++.+.||+|+||.||+|.++.++..||||++..... ..+.+.+|+.+|+++ +||||+++++++...+.+||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEE
Confidence 4579999999999999999999999999999999876532 457799999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||++|+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 294 v~E~~~~g~L~~~l~~~---------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~ 355 (495)
T 1opk_A 294 ITEFMTYGNLLDYLREC---------------NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENH 355 (495)
T ss_dssp EEECCTTCBHHHHHHHS---------------CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGG
T ss_pred EEEccCCCCHHHHHHhc---------------CcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC---CCC
Confidence 99999999999987542 235689999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.+||+|||+++....... .....+|+.|+|||++.+ .++.++|||||||++|||++ |..||.+.+..++...+...
T Consensus 356 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~ 435 (495)
T 1opk_A 356 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 435 (495)
T ss_dssp CEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT
T ss_pred cEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 899999999987653321 223456788999998864 46889999999999999999 99999988887777766554
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. ......+++.+.+||.+||+.||.+|||+.++++
T Consensus 436 ~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 436 YR---MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp CC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CC---CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 22 2233568899999999999999999999999976
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-44 Score=362.37 Aligned_cols=265 Identities=24% Similarity=0.302 Sum_probs=214.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCC-----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGD-----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|++.+.||+|+||.||+|.+..++. .||+|.+.... .....+.+.+|+.+++.+.+||||+++++++...
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 4689999999999999999999877664 79999986543 2345677999999999995699999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+.+|+|||||++|+|.+++............ .......+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPA---FAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC----------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhccccccccc---ccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECC
Confidence 9999999999999999988754211100000 0011356899999999999999999999999999999999999984
Q ss_pred CCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.......
T Consensus 200 ---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~ 276 (333)
T 2i1m_A 200 ---GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 276 (333)
T ss_dssp ---GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH
T ss_pred ---CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH
Confidence 77899999999986543322 234567889999998764 56889999999999999998 99999887766666
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+........ ....+++.+.+||.+||..||.+|||+.++++
T Consensus 277 ~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 277 YKLVKDGYQMA--QPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp HHHHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCC--CCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 66655443322 22457899999999999999999999999986
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=360.62 Aligned_cols=268 Identities=24% Similarity=0.271 Sum_probs=209.9
Q ss_pred ccceeeeeeecccCCeEEEEEEE-----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|++.+.||+|+||.||+|.+ ..+++.||||++.... .......+.+|+.++.++.+||||+++++++...
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 103 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 103 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence 46899999999999999999985 3567899999987543 2345667899999999997799999999998765
Q ss_pred -CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 -NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
+.+++|||||++|+|.+++........ .............+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182 (316)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTCTTSEE-CC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCceEEEEEcCCCCcHHHHHHhcccccc-cccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC
Confidence 459999999999999998754311000 000000000123489999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
.++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+......
T Consensus 183 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~ 259 (316)
T 2xir_A 183 ---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259 (316)
T ss_dssp ---GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH
T ss_pred ---CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH
Confidence 467899999999987644322 234578999999998765 46889999999999999998 9999988765544
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+...+....... ....+++.+.++|.+||..||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 260 FCRRLKEGTRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp HHHHHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhccCccCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 444333322222 224578999999999999999999999999875
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=370.04 Aligned_cols=249 Identities=23% Similarity=0.346 Sum_probs=200.0
Q ss_pred cceeeeeeecccCCeEEEEEEEc---CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+|.+.+.||+|+||.||+|++. .++..||||++.... .....+.+.+|+.+++++ +||||+++++++...+.+
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSC
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCce
Confidence 57999999999999999999876 467789999986542 244567899999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||||++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 122 ~lv~e~~~~~sL~~~l~~~----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~ 182 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKH----------------DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN---S 182 (373)
T ss_dssp EEEEECCTTCBHHHHHHTT----------------TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---T
T ss_pred EEEEeCCCCCcHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEc---C
Confidence 9999999999999877422 35689999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
++.+||+|||+++....... .....+|+.|+|||++.+ .++.++|||||||++|||++ |+.||.+....+....
T Consensus 183 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~ 262 (373)
T 2qol_A 183 NLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262 (373)
T ss_dssp TCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHH
T ss_pred CCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 78999999999987653321 122345788999998864 56889999999999999998 9999999888887777
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..+.. ......++..+.+||.+||..||.+|||+.++++
T Consensus 263 i~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 263 VDEGYR---LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp HHTTEE---CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHcCCC---CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 765422 1223467899999999999999999999999875
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=349.44 Aligned_cols=246 Identities=18% Similarity=0.209 Sum_probs=209.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC--CeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~--~~~~ 173 (577)
++|++.+.||+|+||.||+|++. |+.||||++..... .....+.+.+|+.+++++ +||||+++++++... +.++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDW-STRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTC-CHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSSCE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEeccccc-CHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCCeE
Confidence 47999999999999999999874 88999999876543 234567799999999999 599999999999876 7899
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCcEEeecCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAK 251 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~NILl~~~~ 251 (577)
+||||+++|+|.+++... ....+++..++.++.||+.||.|||++| |+||||||+|||++
T Consensus 86 lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~--- 147 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEG---------------TNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID--- 147 (271)
T ss_dssp EEEECCTTCBHHHHHHSC---------------SSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEEC---
T ss_pred eeecccCCCcHHHHHhhc---------------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEc---
Confidence 999999999999877432 2236899999999999999999999999 99999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCC-C---CCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-G---PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~---~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.++.++|+|||++..... ....||+.|+|||++.+.. + .++|||||||++|+|++|+.||.+....+....+
T Consensus 148 ~~~~~~l~~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 223 (271)
T 3kmu_A 148 EDMTARISMADVKFSFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV 223 (271)
T ss_dssp TTSCEEEEGGGSCCTTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH
T ss_pred CCcceeEEeccceeeecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH
Confidence 478899999998765332 3457899999999987643 2 3699999999999999999999998888877777
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
........ ..+.+++++.++|.+||..||.+|||+.++++
T Consensus 224 ~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 224 ALEGLRPT--IPPGISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp HHSCCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhcCCCCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 66543322 23568999999999999999999999999975
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=366.71 Aligned_cols=249 Identities=20% Similarity=0.274 Sum_probs=204.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCE----EEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~----vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
++|++.+.||+|+||.||+|.+..+++. ||+|.+..... ......+.+|+.+++.+ +||||+++++++. ++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~ 88 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GSS 88 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS--CSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BSS
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc--HHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CCc
Confidence 5799999999999999999999888876 77777643321 12234567899999999 5999999999886 456
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~--- 149 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQH----------------RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK--- 149 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSS----------------GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEES---
T ss_pred cEEEEEeCCCCCHHHHHHHc----------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEEC---
Confidence 89999999999999877432 24688899999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCC---CccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+++...... ......||+.|+|||++. +.++.++|||||||++|+|++ |..||.+....+....
T Consensus 150 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~ 229 (325)
T 3kex_A 150 SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL 229 (325)
T ss_dssp SSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHH
T ss_pred CCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHH
Confidence 47889999999998765432 234557888999999887 456889999999999999999 9999998887777776
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+........ ...++.++.+||.+||..||.+|||+.+++++
T Consensus 230 ~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 230 LEKGERLAQ---PQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHTTCBCCC---CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred HHcCCCCCC---CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 665432211 23467889999999999999999999999886
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=364.86 Aligned_cols=246 Identities=23% Similarity=0.291 Sum_probs=194.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----Ce
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD----NY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~----~~ 171 (577)
.+|++.+.||+|+||.||+|++. ++.||||++.... .......+|+.+++++ +||||+++++++... ..
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD----KQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEE
T ss_pred hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc----hHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCce
Confidence 47999999999999999999864 7899999986542 2345567799999999 599999999999864 35
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc----------CceeccCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH----------GLVHRDMK 241 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~----------~iiHrDlK 241 (577)
+|+|||||++|+|.+++.. ..+++..++.++.||+.||.|||+. ||+|||||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~------------------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlk 158 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKA------------------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK 158 (322)
T ss_dssp EEEEEECCTTCBHHHHHHH------------------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCS
T ss_pred EEEEEecCCCCCHHHHHHh------------------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCC
Confidence 7999999999999987742 4589999999999999999999999 99999999
Q ss_pred CCcEEeecCCCCCCeeEEecCCCcccCCCC---CccccccCCccccchhcccC------CCCCCchhhHHHHHHHHHhCC
Q 008127 242 PENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK------SGPESDVWSIGVITYILLCGR 312 (577)
Q Consensus 242 p~NILl~~~~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~DiwSlG~il~el~tg~ 312 (577)
|+|||++ .++.+||+|||+|+...... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+
T Consensus 159 p~Nill~---~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~ 235 (322)
T 3soc_A 159 SKNVLLK---NNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRC 235 (322)
T ss_dssp GGGEEEC---TTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred hHhEEEC---CCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCC
Confidence 9999998 47899999999997654332 23346899999999998753 355789999999999999999
Q ss_pred CCCCCCCh----------------hHHHHHHHhCCCCCCCC-CCC--CCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 313 RPFWDKTE----------------DGIFKEVLRNKPDFRRK-PWP--SISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 313 ~Pf~~~~~----------------~~~~~~i~~~~~~~~~~-~~~--~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.||.+... ......+.......... .+. ..++++.+||.+||..||.+|||+.++++
T Consensus 236 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 236 TAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp TTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99965422 12222222222111110 011 12345999999999999999999999875
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=348.85 Aligned_cols=246 Identities=22% Similarity=0.364 Sum_probs=210.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+. +++.||+|++..... ..+.+.+|+.+++.+ +||||+++++++...+.+|+|
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB----CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEE
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC----CHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEEE
Confidence 47999999999999999999976 677999999976543 346789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++ .++.
T Consensus 82 ~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~---~~~~ 142 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQ----------------RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQV 142 (267)
T ss_dssp ECCCTTCBHHHHHHHT----------------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---GGGC
T ss_pred EeCCCCCcHHHHHhhC----------------cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC---CCCC
Confidence 9999999999877432 35689999999999999999999999999999999999998 4778
Q ss_pred eeEEecCCCcccCCCC--CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||++....... ......||+.|+|||++.+ .++.++||||||+++|+|++ |..||.+....+....+..+.
T Consensus 143 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~ 222 (267)
T 3t9t_A 143 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 222 (267)
T ss_dssp EEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC
T ss_pred EEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Confidence 9999999998654321 1234467889999998874 45889999999999999999 999999888888887777654
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... ....+++.+.++|.+||..||.+|||+.++++
T Consensus 223 ~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 257 (267)
T 3t9t_A 223 RLY---KPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257 (267)
T ss_dssp CCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCC---CCccCcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 322 22457899999999999999999999999986
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-44 Score=356.86 Aligned_cols=254 Identities=20% Similarity=0.288 Sum_probs=203.4
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCC-eeEEEEEEEcCCe
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-VVKFYNAFEDDNY 171 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn-iv~~~~~~~~~~~ 171 (577)
.+.++|++.+.||+|+||.||+|++..+|+.||||++..... ...+.+|+.+++.+. |++ +..+..++...+.
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~-~~~~i~~~~~~~~~~~~ 79 (296)
T 3uzp_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQ-GGVGIPTIRWCGAEGDY 79 (296)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHT-TSTTCCCEEEEEEETTE
T ss_pred eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhh-cCCCCCccccccCCCCc
Confidence 355789999999999999999999999999999999865432 235789999999996 555 4555455567888
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~ 142 (296)
T 3uzp_A 80 NVMVMELL-GPSLEDLFNFC----------------SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK 142 (296)
T ss_dssp EEEEEECC-CCBHHHHHHHT----------------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGG
T ss_pred eEEEEEec-CCCHHHHHHhh----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCC
Confidence 99999999 99999877432 35799999999999999999999999999999999999995333
Q ss_pred CCCCeeEEecCCCcccCCCCC--------ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCC---
Q 008127 252 EDSSLKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT--- 319 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~--- 319 (577)
.++.+||+|||++........ .....||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+..
T Consensus 143 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 222 (296)
T 3uzp_A 143 KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT 222 (296)
T ss_dssp GTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred CCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh
Confidence 578899999999987654322 2456899999999998764 5889999999999999999999997643
Q ss_pred hhHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 320 EDGIFKEVLRNKPDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 320 ~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
....+..+.......+ ....+.+|+++.+||.+||+.||.+|||+.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 223 KRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp SSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 2233333333221111 1112457899999999999999999999999876
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=373.83 Aligned_cols=244 Identities=23% Similarity=0.335 Sum_probs=206.4
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-eEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-YVY 173 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-~~~ 173 (577)
.++|++.+.||+|+||.||+|.+. |+.||||++.... ..+.+.+|+.+++++ +||||+++++++.... .+|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-----TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-----HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCceE
Confidence 357999999999999999999864 7899999987543 346789999999999 5999999999987654 799
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|||||++|+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 264 iv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~ 325 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSR---------------GRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---ED 325 (450)
T ss_dssp EEEECCTTCBHHHHHHHH---------------CTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TT
T ss_pred EEEEecCCCcHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEC---CC
Confidence 999999999999988643 224479999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+.+||+|||+++..... .....+|+.|+|||++.+ .++.++|||||||++|||++ |+.||.+....+....+..+.
T Consensus 326 ~~~kl~DfG~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~ 403 (450)
T 1k9a_A 326 NVAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY 403 (450)
T ss_dssp SCEEECCCTTCEECC--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTC
T ss_pred CCEEEeeCCCccccccc--ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 89999999999865432 223467899999998865 46889999999999999998 999999888888887776653
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
. ....+.+++.+.+||.+||..||.+|||+.++++
T Consensus 404 ~---~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 404 K---MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp C---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred C---CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 2 2233568999999999999999999999999875
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=353.59 Aligned_cols=253 Identities=26% Similarity=0.435 Sum_probs=195.9
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+-..++|++.+.||+|+||.||+|.+. ..||||++..... .....+.+.+|+.+++++. ||||+++++++ ..+.
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~-~~~~ 93 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTR-HVNILLFMGYS-TAPQ 93 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSC-CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEE-CSSS
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCC-CHHHHHHHHHHHHHHHhCC-CCcEEEEEeec-cCCc
Confidence 334568999999999999999999754 3599999865532 3456678999999999994 99999999955 5566
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+++|||||++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 94 ~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~--- 154 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHA----------------SETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH--- 154 (289)
T ss_dssp CEEEEECCCEEEHHHHHTT----------------C---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---
T ss_pred cEEEEEecCCCcHHHHHhh----------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC---
Confidence 8999999999999886632 235689999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCC---CCCccccccCCccccchhcc----cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 252 EDSSLKATDFGLSDFIKP---GKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~---~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||++..... ........||+.|+|||++. ..++.++|||||||++|+|++|+.||.+....+..
T Consensus 155 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~ 234 (289)
T 3og7_A 155 EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234 (289)
T ss_dssp TTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH
T ss_pred CCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH
Confidence 478899999999976542 22334567999999999885 23467899999999999999999999886655544
Q ss_pred HHHH-hCCCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 325 KEVL-RNKPDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 325 ~~i~-~~~~~~~-~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.... ....... ......+++.+.+||.+||..||.+|||+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp HHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 4443 3322221 1223568899999999999999999999999976
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=352.52 Aligned_cols=252 Identities=25% Similarity=0.323 Sum_probs=203.2
Q ss_pred cccceeeeeeecccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
..++|++++.||+|+||.||+|+ +..+++.||||++..... ....+.+.+|+.+++.+. ||||+++++++...
T Consensus 19 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~ 95 (302)
T 4e5w_A 19 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLY-HENIVKYKGICTED 95 (302)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCC-CTTBCCEEEEEEC-
T ss_pred hhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc--chhHHHHHHHHHHHHhCC-CCCeeeeeeEEecC
Confidence 34579999999999999999998 567899999999875432 234577899999999994 99999999999876
Q ss_pred --CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 170 --NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 170 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+++||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 96 ~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~ 159 (302)
T 4e5w_A 96 GGNGIKLIMEFLPSGSLKEYLPKN----------------KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 159 (302)
T ss_dssp --CCEEEEEECCTTCBHHHHHHHH----------------TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CCceEEEEEEeCCCCcHHHHHHhc----------------cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEE
Confidence 6799999999999999987543 3568999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCC----
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK---- 318 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~---- 318 (577)
+. ++.+||+|||++........ .....||+.|+|||++.+. ++.++|||||||++|+|++|..|+...
T Consensus 160 ~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 236 (302)
T 4e5w_A 160 ES---EHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALF 236 (302)
T ss_dssp EE---TTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH
T ss_pred cC---CCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHH
Confidence 84 67899999999987654432 2345788899999988654 578899999999999999999886321
Q ss_pred ----------ChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 319 ----------TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 319 ----------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.........+..... ....+.+++.+.+||.+||..||.+|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 237 LKMIGPTHGQMTVTRLVNTLKEGKR--LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HHHHCSCCGGGHHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred hhccCCcccccCHHHHHHHHhccCC--CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 111122222222222 2233568999999999999999999999999976
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=348.60 Aligned_cols=250 Identities=22% Similarity=0.290 Sum_probs=206.6
Q ss_pred ccceeeeeeecccCCeEEEEEEEcC---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.++|++.+.||+|+||.||+|.+.. ++..||||.+.... .....+.+.+|+.+++.+ +||||+++++++..+ .
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-~ 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEEE-P 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECSS-S
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhC-CCCCcceEEEEEcCC-C
Confidence 3579999999999999999998654 34469999987653 234567899999999999 599999999998754 4
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.|+||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~-- 148 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERN----------------KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS-- 148 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHH----------------TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEE--
T ss_pred CEEEEecCCCCCHHHHHHhc----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECC--
Confidence 68999999999999887543 356899999999999999999999999999999999999984
Q ss_pred CCCCeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i 327 (577)
++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |+.||......+....+
T Consensus 149 -~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~ 227 (281)
T 3cc6_A 149 -PECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL 227 (281)
T ss_dssp -TTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHH
T ss_pred -CCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHH
Confidence 67899999999987654322 234567889999998864 46889999999999999998 99999888777777666
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
...... .....+++.+.++|.+||..||.+|||+.+++++
T Consensus 228 ~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 228 EKGDRL---PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp HHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hcCCCC---CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 654322 1224578999999999999999999999999863
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=360.33 Aligned_cols=251 Identities=24% Similarity=0.444 Sum_probs=188.4
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE-------
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE------- 167 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~------- 167 (577)
..+|++.+.||+|+||.||+|++..+|+.||||++.... ......+.+|+.++.++.+||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS---HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc---hHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 348999999999999999999999999999999985543 3456778999999999977999999999984
Q ss_pred -cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCc
Q 008127 168 -DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPEN 244 (577)
Q Consensus 168 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~N 244 (577)
....+++||||+. |+|.+++... .....+++..++.++.||+.||.|||+.| |+||||||+|
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~--------------~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~N 168 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKM--------------ESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVEN 168 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHH--------------HTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGG
T ss_pred cCCceEEEEEEecC-CCHHHHHHHh--------------hccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCccc
Confidence 3456899999995 7898877542 23467999999999999999999999999 9999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCCCCc-------------cccccCCccccchhcc----cCCCCCCchhhHHHHHHH
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPGKKF-------------QDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYI 307 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~~~~-------------~~~~gt~~y~aPE~~~----~~~~~~~DiwSlG~il~e 307 (577)
||++ .++.+||+|||++......... ....||+.|+|||++. ..++.++|||||||++|+
T Consensus 169 Il~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~e 245 (337)
T 3ll6_A 169 LLLS---NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYL 245 (337)
T ss_dssp CEEC---TTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHH
T ss_pred EEEC---CCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHH
Confidence 9998 4778999999999876543221 1456999999999873 234778999999999999
Q ss_pred HHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 308 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 308 l~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
|++|..||.+........ .... .......+..+.+||.+||..||.+|||+.+++++.+
T Consensus 246 l~~g~~p~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 246 LCFRQHPFEDGAKLRIVN----GKYS--IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp HHHSSCCC----------------CC--CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHhCCCCCcchhHHHhhc----Cccc--CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 999999997655443322 2221 2223456788999999999999999999999998754
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=350.83 Aligned_cols=251 Identities=21% Similarity=0.278 Sum_probs=210.2
Q ss_pred cceeeee-eecccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGK-LLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~-~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
++|.+.. .||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++.+ +||||+++++++. .+.+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~ 84 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQ-AEAL 84 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEE-SSSE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhC-CCCCEeEEEEEec-CCCc
Confidence 4677776 9999999999999864 467889999987643 244677899999999999 5999999999995 4568
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++||||+++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 85 ~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--- 145 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVG----------------KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN--- 145 (287)
T ss_dssp EEEEECCTTEEHHHHHTT----------------CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE---
T ss_pred EEEEEeCCCCCHHHHHHh----------------CCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcC---
Confidence 999999999999887632 2356899999999999999999999999999999999999984
Q ss_pred CCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |+.||.+....+....
T Consensus 146 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~ 225 (287)
T 1u59_A 146 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 225 (287)
T ss_dssp TTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH
T ss_pred CCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence 77899999999987643322 223457899999998874 45889999999999999998 9999998888887777
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
+..+... ...+.+++++.+||.+||..||.+|||+.+++++.+
T Consensus 226 i~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 226 IEQGKRM---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp HHTTCCC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HhcCCcC---CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 7665422 223568999999999999999999999999998655
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-44 Score=368.91 Aligned_cols=258 Identities=18% Similarity=0.232 Sum_probs=193.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCC-----CCEEEEEEecccccCchh--------hHHHHHHHHHHHHHhcCCCCe
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKMILPI--------AVEDVKREVKILQALAGHENV 159 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~~~~~--------~~~~~~~E~~~l~~l~~hpni 159 (577)
...++|++.+.||+|+||.||+|.+..+ ++.||||++......... ....+..|+..+..+ +||||
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~~i 110 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKL-KYLGV 110 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTC-SCCCS
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhc-cCCCC
Confidence 3455899999999999999999998764 588999998654310000 001122333444445 49999
Q ss_pred eEEEEEEEcC----CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCc
Q 008127 160 VKFYNAFEDD----NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL 235 (577)
Q Consensus 160 v~~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~i 235 (577)
+++++++... ..+||||||| |++|.+++... ...+++..++.++.||+.||.|||++||
T Consensus 111 v~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----------------~~~l~~~~~~~i~~qi~~~l~~lH~~~i 173 (364)
T 3op5_A 111 PKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----------------AKRFSRKTVLQLSLRILDILEYIHEHEY 173 (364)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT----------------TSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred CeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 9999998764 5689999999 99999877432 3679999999999999999999999999
Q ss_pred eeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCC--------CccccccCCccccchhcccC-CCCCCchhhHHHHHH
Q 008127 236 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITY 306 (577)
Q Consensus 236 iHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~ 306 (577)
+||||||+|||++. ..++.+||+|||+|+.+.... .....+||+.|+|||++.+. ++.++|||||||++|
T Consensus 174 iHrDlkp~Nill~~-~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~ 252 (364)
T 3op5_A 174 VHGDIKASNLLLNY-KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMI 252 (364)
T ss_dssp ECCCCCGGGEEEES-SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred EEecCCHHHEEEec-CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHH
Confidence 99999999999983 236889999999997654321 11345699999999998765 688999999999999
Q ss_pred HHHhCCCCCCCCChhHHHHHHHh----CC-CCCC--CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 307 ILLCGRRPFWDKTEDGIFKEVLR----NK-PDFR--RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 307 el~tg~~Pf~~~~~~~~~~~i~~----~~-~~~~--~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+|++|+.||.+............ .. ..+. ......+++++.+||..||..||.+||++.++++
T Consensus 253 el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 253 QWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 99999999986433222211111 00 0000 0011457899999999999999999999999876
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=358.51 Aligned_cols=249 Identities=22% Similarity=0.296 Sum_probs=202.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEE----EEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~v----aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
..+|++++.||+|+||.||+|.+..+++.| |+|.+.... .......+.+|+.+++.+ +||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTST 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESSS
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecCC
Confidence 357999999999999999999998888765 666554332 233567889999999999 5999999999998765
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.++|+||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~- 152 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREH----------------KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT- 152 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHT----------------TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE-
T ss_pred -ceEEEEecCCCcHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcC-
Confidence 78999999999999887543 367899999999999999999999999999999999999984
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+...
T Consensus 153 --~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~ 230 (327)
T 3lzb_A 153 --PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 230 (327)
T ss_dssp --TTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH
T ss_pred --CCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Confidence 77899999999987643322 233457889999998865 45889999999999999999 999999888877776
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+...... ...+.++.++.+||.+||..||.+|||+.++++
T Consensus 231 ~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 231 ILEKGERL---PQPPICTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp HHHTTCCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHcCCCC---CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 66554322 223568899999999999999999999999987
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=375.72 Aligned_cols=248 Identities=24% Similarity=0.344 Sum_probs=210.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
..++|++.+.||+|+||.||+|.+. ++..||||++..... ..+.+.+|+.+|+.+ +||||+++++++. .+.+|
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~ 258 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM----SVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIY 258 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCE
T ss_pred chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc----cHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccE
Confidence 4468999999999999999999875 467899999976532 467899999999999 5999999999986 56789
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|||||++|+|.+++... ....+++..++.++.||+.||.|||+++|+||||||+|||++ .+
T Consensus 259 lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~ 320 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSD---------------EGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---AS 320 (454)
T ss_dssp EEECCCTTCBHHHHHHSH---------------HHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TT
T ss_pred EEEeecCCCcHHHHHHhc---------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEC---CC
Confidence 999999999999988533 113578899999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCC--CccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
+.+||+|||+++...... ......+|+.|+|||++. +.++.++|||||||++|||++ |+.||.+.+..++...+..
T Consensus 321 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~ 400 (454)
T 1qcf_A 321 LVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 400 (454)
T ss_dssp CCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH
T ss_pred CcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 899999999998764321 112345678899999886 456889999999999999999 9999999988888887776
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+.. .+....+++++.+||.+||..||.+|||+.++++
T Consensus 401 ~~~---~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 401 GYR---MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp TCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCC---CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 532 2223568899999999999999999999999876
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-43 Score=356.39 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=205.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCC----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
..+|.+.+.||+|+||.||+|.+..++ ..||||++.... .......+.+|+.+++.+ +||||+++++++...+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 119 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYK 119 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSS
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCC
Confidence 458999999999999999999887553 359999986543 234566789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+++||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 120 ~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~-- 181 (333)
T 1mqb_A 120 PMMIITEYMENGALDKFLREK----------------DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN-- 181 (333)
T ss_dssp SEEEEEECCTTEEHHHHHHHT----------------TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC--
T ss_pred CcEEEEeCCCCCcHHHHHHhC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEEC--
Confidence 999999999999999877432 35789999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |+.||.+....+..
T Consensus 182 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~ 260 (333)
T 1mqb_A 182 -SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM 260 (333)
T ss_dssp -TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred -CCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence 478999999999987643221 123356889999998864 46889999999999999999 99999988888887
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..+..+.. ......+++.+.+||.+||..||.+||++.+++++
T Consensus 261 ~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 261 KAINDGFR---LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp HHHHTTCC---CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHCCCc---CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 77766532 12234688999999999999999999999998763
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-44 Score=355.98 Aligned_cols=255 Identities=20% Similarity=0.300 Sum_probs=198.1
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+|+.+++.+.+|++|..+..++...+..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence 355789999999999999999999999999999998755432 234788999999997444455555555778899
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++||||+ +++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++..+.
T Consensus 81 ~lv~e~~-~~~L~~~~~~~----------------~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~ 143 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFC----------------SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKK 143 (296)
T ss_dssp EEEEECC-CCBHHHHHHHT----------------TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGG
T ss_pred EEEEEcc-CCCHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCC
Confidence 9999999 99999877432 356999999999999999999999999999999999999943235
Q ss_pred CCCeeEEecCCCcccCCCCC--------ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh--
Q 008127 253 DSSLKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-- 321 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-- 321 (577)
++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....
T Consensus 144 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 223 (296)
T 4hgt_A 144 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK 223 (296)
T ss_dssp TTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS
T ss_pred CCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh
Confidence 78899999999987654322 235689999999998876 4588999999999999999999999764322
Q ss_pred -HHHHHHHhCCCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 322 -GIFKEVLRNKPDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 322 -~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+..+.......+ ......+|+++.+||.+||+.||.+|||+.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 224 RQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp SSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 23333322211111 1112457899999999999999999999999876
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=350.09 Aligned_cols=248 Identities=21% Similarity=0.291 Sum_probs=205.9
Q ss_pred cceeeee-eecccCCeEEEEEEE--cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGK-LLGHGQFGYTYVATD--KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~-~lG~G~fg~V~~~~~--~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+|.+.+ .||+|+||.||+|.+ ..+++.||||++..... .....+.+.+|+.+++.+ +||||+++++++ ..+.+
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCc
Confidence 4799988 999999999999954 56788999999875532 233467899999999999 599999999999 55678
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 93 ~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~--- 152 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQ-----------------NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT--- 152 (291)
T ss_dssp EEEEECCTTEEHHHHHHH-----------------CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---
T ss_pred EEEEEeCCCCCHHHHHHh-----------------CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeC---
Confidence 999999999999987743 356899999999999999999999999999999999999984
Q ss_pred CCCeeEEecCCCcccCCCCCc----cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
++.+||+|||++......... ....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....
T Consensus 153 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~ 232 (291)
T 1xbb_A 153 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 232 (291)
T ss_dssp TTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred CCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 678999999999876543321 22356789999998865 45789999999999999999 9999998888777777
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+...... .....+++.+.++|.+||..||.+|||+.++++
T Consensus 233 ~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 233 LEKGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp HHTTCCC---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 6654322 123568899999999999999999999999875
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-43 Score=353.02 Aligned_cols=257 Identities=19% Similarity=0.269 Sum_probs=204.0
Q ss_pred ccceeeeeeecccCCeEEEEEEEcC---CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC-
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN- 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~- 170 (577)
.++|.+.+.||+|+||.||+|.+.. ++..||||++..... .....+.+.+|+.+++++. ||||+++++++...+
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFS-HPNVIRLLGVCIEMSS 110 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEC---
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCC-CCCeeeeeEEEeeccc
Confidence 4589999999999999999998765 556899999875532 2345677999999999995 999999999998654
Q ss_pred ----eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 171 ----YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 171 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
..++||||+++|+|.+++..... ......+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIl 179 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRL-----------ETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCM 179 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTB-----------TTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhh-----------hcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEE
Confidence 45999999999999998754311 113467999999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChh
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTED 321 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~ 321 (577)
++ .++.+||+|||++........ .....+++.|+|||++.+. ++.++|||||||++|+|++ |..||.+....
T Consensus 180 i~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 256 (313)
T 3brb_A 180 LR---DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH 256 (313)
T ss_dssp EC---TTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred Ec---CCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH
Confidence 98 478899999999987643321 2234678899999988654 5889999999999999999 99999988888
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 322 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+....+..+... ...+.+++.+.+||.+||..||.+|||+.+++++
T Consensus 257 ~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 302 (313)
T 3brb_A 257 EMYDYLLHGHRL---KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ 302 (313)
T ss_dssp GHHHHHHTTCCC---CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCCC---CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 888777765422 2235688999999999999999999999999863
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=356.54 Aligned_cols=254 Identities=21% Similarity=0.345 Sum_probs=204.1
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE----cCC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE----DDN 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~----~~~ 170 (577)
.++|++.+.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.+++.+ +||||+++++++. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE---QQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS---HHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC---HHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCc
Confidence 357999999999999999999999999999999986542 34667889999999999 5999999999987 345
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+|+||||+++|+|.+++... ......+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~-- 168 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERL-------------KDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG-- 168 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-------------HTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC--
T ss_pred eeEEEEEeCCCCcHHHHHHHH-------------HhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc--
Confidence 789999999999999887543 12346799999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC----------ccccccCCccccchhcccC----CCCCCchhhHHHHHHHHHhCCCCCC
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK----------FQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFW 316 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~----------~~~~~gt~~y~aPE~~~~~----~~~~~DiwSlG~il~el~tg~~Pf~ 316 (577)
.++.+||+|||++........ .....||+.|+|||++.+. ++.++|||||||++|+|++|+.||.
T Consensus 169 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 247 (317)
T 2buj_A 169 -DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247 (317)
T ss_dssp -TTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred -CCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence 478899999999876432110 1234679999999998643 4789999999999999999999995
Q ss_pred CC--ChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCc
Q 008127 317 DK--TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371 (577)
Q Consensus 317 ~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp 371 (577)
.. ....... ....... .+..+.+++++.+||.+||..||.+|||+.+++++-
T Consensus 248 ~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 301 (317)
T 2buj_A 248 MVFQKGDSVAL-AVQNQLS--IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301 (317)
T ss_dssp HHHHTTSCHHH-HHHCC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hhhcccchhhH-HhhccCC--CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHh
Confidence 31 1111222 2222222 222356889999999999999999999999999853
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=363.37 Aligned_cols=260 Identities=22% Similarity=0.298 Sum_probs=205.8
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
....++|++.+.||+|+||.||+|.+ .+|+.||||++.... ....+.+.+|+.+++.+ +||||+++++++...+.
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPES---SQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCC---SSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTC
T ss_pred HHHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccC---hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCe
Confidence 34567899999999999999999995 478999999886543 23567899999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+||||+++|+|.+++... ......+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~--- 173 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGS-------------DLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD--- 173 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSS-------------CCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEEC---
T ss_pred EEEEEEcCCCCcHHHHHhcc-------------CCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEEC---
Confidence 99999999999998865321 01124589999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCC---CCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH--
Q 008127 252 EDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK-- 325 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~-- 325 (577)
.++.+||+|||++...... .......||+.|+|||++. +.++.++|||||||++|+|++|+.||.+....+...
T Consensus 174 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~ 253 (321)
T 2qkw_B 174 ENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA 253 (321)
T ss_dssp TTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHH
T ss_pred CCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHH
Confidence 4789999999999764322 2233457999999999875 456899999999999999999999997654322111
Q ss_pred ----HHH-hCCC------CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 326 ----EVL-RNKP------DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 326 ----~i~-~~~~------~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
... .... .......+..+..+.+++.+||..||++|||+.+++++..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 254 EWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp HHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111 1110 0111111234467899999999999999999999987643
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=357.66 Aligned_cols=249 Identities=24% Similarity=0.346 Sum_probs=204.8
Q ss_pred cceeeeeeecccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE--cC
Q 008127 96 RRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE--DD 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~--~~ 169 (577)
++|++.+.||+|+||.||+|+ +..+++.||||++.... ....+.+.+|+.+++++ +||||+++++++. ..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC---HHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCC
Confidence 479999999999999999998 56789999999987653 34567799999999999 5999999999886 45
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
..+|+||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~ 162 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRH----------------RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES 162 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHH----------------GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred ceEEEEEeecCCCCHHHHHHhc----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECC
Confidence 6799999999999999987543 245899999999999999999999999999999999999984
Q ss_pred CCCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChh---
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED--- 321 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~--- 321 (577)
++.+||+|||++........ .....||+.|+|||++.+. ++.++|||||||++|+|++|..||......
T Consensus 163 ---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~ 239 (327)
T 3lxl_A 163 ---EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR 239 (327)
T ss_dssp ---TTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH
T ss_pred ---CCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhh
Confidence 78899999999987654332 2345688899999988754 488999999999999999999998543321
Q ss_pred -----------HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 322 -----------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 322 -----------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
......+..... ....+.+++.+.+||.+||..||.+|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 296 (327)
T 3lxl_A 240 MMGCERDVPALSRLLELLEEGQR--LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGP 296 (327)
T ss_dssp HCC----CCHHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hcccccccccHHHHHHHhhcccC--CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 111222222222 2223568999999999999999999999999965
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=351.65 Aligned_cols=252 Identities=22% Similarity=0.343 Sum_probs=202.5
Q ss_pred ccceeeeeeecccCCeEEEEEEEcC-CCC--EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKA-NGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~-~~~--~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.++|++.+.||+|+||.||+|.+.. ++. .||||++...........+.+.+|+.+++++ +||||+++++++....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-
Confidence 3579999999999999999998643 333 6899998765443345678899999999999 5999999999998765
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.++||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~-- 156 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKH----------------QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT-- 156 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHH----------------GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE--
T ss_pred ceeeEecccCCCHHHHHHhc----------------cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcC--
Confidence 88999999999999987543 245889999999999999999999999999999999999984
Q ss_pred CCCCeeEEecCCCcccCCCCC----ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~ 325 (577)
++.+||+|||++........ .....+|+.|+|||++.+. ++.++|||||||++|+|++ |..||.+....+...
T Consensus 157 -~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 235 (291)
T 1u46_A 157 -RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 235 (291)
T ss_dssp -TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred -CCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH
Confidence 67899999999987654332 2234678899999988654 5789999999999999999 999999988888888
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+.......+ ....+++.+.++|.+||..||.+|||+.++++
T Consensus 236 ~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 236 KIDKEGERLP--RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp HHHTSCCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHccCCCCC--CCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 8876554333 23568999999999999999999999999987
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=352.06 Aligned_cols=247 Identities=23% Similarity=0.358 Sum_probs=195.8
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHH--hcCCCCeeEEEEEEEc--
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA--LAGHENVVKFYNAFED-- 168 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~--l~~hpniv~~~~~~~~-- 168 (577)
.+.++|++.+.||+|+||.||+|.+ +|+.||||++... ....+.+|.+++.. + +||||+++++++..
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l-~h~niv~~~~~~~~~~ 75 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR------DEKSWFRETELYNTVML-RHENILGFIASDMTSR 75 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHTCC-CCTTBCCEEEEEEEEE
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc------cchhhHHHHHHHHHhhc-cCcCeeeEEEeecccc
Confidence 4567899999999999999999986 6899999998653 33556678887777 5 69999999998654
Q ss_pred --CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH--------hcCceec
Q 008127 169 --DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH--------LHGLVHR 238 (577)
Q Consensus 169 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH--------~~~iiHr 238 (577)
...+|+||||+++|+|.+++ +...+++..++.++.||+.||.||| +.||+||
T Consensus 76 ~~~~~~~lv~e~~~~g~L~~~l------------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~ 137 (301)
T 3q4u_A 76 HSSTQLWLITHYHEMGSLYDYL------------------QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHR 137 (301)
T ss_dssp TTEEEEEEEECCCTTCBHHHHH------------------TTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECS
T ss_pred CCCceeEEehhhccCCCHHHHH------------------hhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecC
Confidence 35689999999999999876 2357899999999999999999999 9999999
Q ss_pred cCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC-----ccccccCCccccchhcccCC-------CCCCchhhHHHHHH
Q 008127 239 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITY 306 (577)
Q Consensus 239 DlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~-------~~~~DiwSlG~il~ 306 (577)
||||+|||++ .++.+||+|||+|........ ....+||+.|+|||++.+.. +.++|||||||++|
T Consensus 138 Dlkp~Nill~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~ 214 (301)
T 3q4u_A 138 DLKSKNILVK---KNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214 (301)
T ss_dssp CCCGGGEEEC---TTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCChHhEEEc---CCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHH
Confidence 9999999998 478999999999976543322 23458999999999987642 35899999999999
Q ss_pred HHHhC----------CCCCCCCCh----hHHHHHHHhCCCCCCCCCC----CCCCHHHHHHHHHccccCcCCCCCHHHHh
Q 008127 307 ILLCG----------RRPFWDKTE----DGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQAL 368 (577)
Q Consensus 307 el~tg----------~~Pf~~~~~----~~~~~~i~~~~~~~~~~~~----~~~s~~~~~li~~~l~~dP~~Rpt~~~il 368 (577)
+|++| ..||..... ..............+..+. ...++.+.+||.+||..||.+|||+.+++
T Consensus 215 el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~ 294 (301)
T 3q4u_A 215 EVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK 294 (301)
T ss_dssp HHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred HHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHH
Confidence 99999 889865322 2333333322221111110 12446799999999999999999999997
Q ss_pred c
Q 008127 369 S 369 (577)
Q Consensus 369 ~ 369 (577)
+
T Consensus 295 ~ 295 (301)
T 3q4u_A 295 K 295 (301)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=368.29 Aligned_cols=256 Identities=20% Similarity=0.224 Sum_probs=193.8
Q ss_pred cccceeeeeeecccCCeEEEEEEEcC---CCCEEEEEEecccccCch--------hhHHHHHHHHHHHHHhcCCCCeeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKMILP--------IAVEDVKREVKILQALAGHENVVKF 162 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vaiK~i~~~~~~~~--------~~~~~~~~E~~~l~~l~~hpniv~~ 162 (577)
..++|++.+.||+|+||.||+|.+.. ++..||||++........ .....+.+|+.+++.+ +||||+++
T Consensus 35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~ 113 (345)
T 2v62_A 35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLF 113 (345)
T ss_dssp TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCE
T ss_pred cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCccee
Confidence 45689999999999999999999987 788999999875432100 0123356788888888 59999999
Q ss_pred EEEEEc----CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceec
Q 008127 163 YNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 238 (577)
Q Consensus 163 ~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHr 238 (577)
++++.. ...+|+||||| +++|.+++.. ...+++..++.++.||+.||.|||++||+||
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~-----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 175 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ-----------------NGTFKKSTVLQLGIRMLDVLEYIHENEYVHG 175 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECE-EEEHHHHCBG-----------------GGBCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred ecccccccCCCcEEEEEEecc-CCCHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 999987 78899999999 9999886532 2478999999999999999999999999999
Q ss_pred cCCCCcEEeecCCCCCCeeEEecCCCcccCCCC--------CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHH
Q 008127 239 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILL 309 (577)
Q Consensus 239 DlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~ 309 (577)
||||+|||++.. ..+.+||+|||+|+.+.... ......||+.|+|||++.+. ++.++|||||||++|+|+
T Consensus 176 Dlkp~NIll~~~-~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell 254 (345)
T 2v62_A 176 DIKAANLLLGYK-NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWL 254 (345)
T ss_dssp CCSGGGEEEESS-STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred CcCHHHEEEccC-CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHH
Confidence 999999999842 12389999999997653221 12456899999999998765 588999999999999999
Q ss_pred hCCCCCCCCC--hhHHHHH---HHhCCCCCCC--CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 310 CGRRPFWDKT--EDGIFKE---VLRNKPDFRR--KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 310 tg~~Pf~~~~--~~~~~~~---i~~~~~~~~~--~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+|+.||.+.. ....... .....+.... .....+++++.+||.+||..||.+|||+.++++
T Consensus 255 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 255 CGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp HSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred hCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 9999996532 2222111 1111111000 011268899999999999999999999999877
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=364.03 Aligned_cols=247 Identities=16% Similarity=0.225 Sum_probs=198.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCC--------CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeE-----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKAN--------GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK----- 161 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~--------~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~----- 161 (577)
.++|++.+.||+|+||.||+|++..+ ++.||||++... ..+.+|+.+++++. ||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~-h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAA-KPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHC-CHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhc-ccchhhhhhhh
Confidence 46899999999999999999999874 889999998654 24788999999995 999887
Q ss_pred ----------EEEEEEc-CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q 008127 162 ----------FYNAFED-DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 230 (577)
Q Consensus 162 ----------~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~L 230 (577)
+++++.. ++.+|+||||| +++|.+++... ....+++..++.++.||+.||.||
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---------------~~~~l~~~~~~~i~~qi~~~L~~L 175 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS---------------PKHVLSERSVLQVACRLLDALEFL 175 (352)
T ss_dssp TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS---------------GGGCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC---------------CcCCCCHHHHHHHHHHHHHHHHHH
Confidence 6777765 78899999999 99999987532 236789999999999999999999
Q ss_pred HhcCceeccCCCCcEEeecCCCCC--CeeEEecCCCcccCCCC--------CccccccCCccccchhccc-CCCCCCchh
Q 008127 231 HLHGLVHRDMKPENFLFKSAKEDS--SLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKR-KSGPESDVW 299 (577)
Q Consensus 231 H~~~iiHrDlKp~NILl~~~~~~~--~vkl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~Diw 299 (577)
|++||+||||||+|||++. ++ .+||+|||+++...... ......||+.|+|||++.+ .++.++|||
T Consensus 176 H~~~ivH~Dikp~NIl~~~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 252 (352)
T 2jii_A 176 HENEYVHGNVTAENIFVDP---EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQ 252 (352)
T ss_dssp HHTTCBCSCCCGGGEEEET---TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred HhCCccCCCCCHHHEEEcC---CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHH
Confidence 9999999999999999984 55 89999999997654321 1234589999999999876 468899999
Q ss_pred hHHHHHHHHHhCCCCCCCCC--hhHHHHHH---HhCCCCCCC--CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 300 SIGVITYILLCGRRPFWDKT--EDGIFKEV---LRNKPDFRR--KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 300 SlG~il~el~tg~~Pf~~~~--~~~~~~~i---~~~~~~~~~--~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
||||++|+|++|+.||.+.. ...+.... ......+.. ..+..+++++.+||.+||..||.+|||+.++++
T Consensus 253 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 329 (352)
T 2jii_A 253 SLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN 329 (352)
T ss_dssp HHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence 99999999999999997753 22222222 222222211 123457899999999999999999999999876
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-43 Score=346.23 Aligned_cols=247 Identities=23% Similarity=0.340 Sum_probs=207.9
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++++.||+|+||.||+|.+. ++..||||.+..... ..+.+.+|+.+++.+ +||||+++++++.. +..++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQL-QHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc----cHHHHHHHHHHHHhC-CCcCcceEEEEEcC-CCcEE
Confidence 468999999999999999999865 567899999876532 356789999999999 59999999999874 45899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 85 v~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~ 146 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTP---------------SGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTL 146 (279)
T ss_dssp EEECCTTCBHHHHTTSH---------------HHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTS
T ss_pred EEecCCCCCHHHHHhcC---------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEc---CCC
Confidence 99999999999876422 113689999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008127 255 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~ 330 (577)
.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |+.||.+....+....+...
T Consensus 147 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 226 (279)
T 1qpc_A 147 SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226 (279)
T ss_dssp CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred CEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc
Confidence 899999999987654322 234467889999998874 45889999999999999999 99999988888877777665
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
... .....+++.+.+||.+||..||.+|||+.++++
T Consensus 227 ~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 227 YRM---VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp CCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCC---CCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 322 223568899999999999999999999999876
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=391.29 Aligned_cols=264 Identities=24% Similarity=0.392 Sum_probs=210.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc------C
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------D 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------~ 169 (577)
++|++.+.||.|+||.||+|.+..+|+.||||++.... .....+.+.+|+.+++++ +||||+++++++.. .
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTT
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCC
Confidence 57999999999999999999999999999999986542 345667899999999999 59999999998765 6
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+..|+|||||+||+|.+++... .....+++..++.++.||+.||.|||+.||+||||||+|||++.
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~--------------~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~ 156 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQF--------------ENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQP 156 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSS--------------SCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEEC
T ss_pred CeEEEEEEeCCCCCHHHHHHhc--------------ccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeec
Confidence 7889999999999999877432 12236899999999999999999999999999999999999996
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH--
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE-- 326 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~-- 326 (577)
.+....+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........
T Consensus 157 ~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i 236 (676)
T 3qa8_A 157 GPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236 (676)
T ss_dssp CSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTC
T ss_pred CCCceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhh
Confidence 44445699999999998776666667789999999998875 568899999999999999999999976533221100
Q ss_pred -------H-----HhCCCCCC------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 327 -------V-----LRNKPDFR------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 327 -------i-----~~~~~~~~------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
+ ..+...+. ....+.+++.+.+||.+||..||.+|||+.++++||||+..
T Consensus 237 ~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 237 REKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp C------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred hcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 0 11111111 11122356789999999999999999999999999999874
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-43 Score=371.24 Aligned_cols=255 Identities=25% Similarity=0.349 Sum_probs=208.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
..++|++.+.||+|+||.||+|.+.. +..||||++..... ..+.+.+|+.+++++ +||||+++++++.. +.+|
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~-~~~~ 254 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIY 254 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC----CHHHHHHHHHHHHhC-CCCCEeeEEEEEcC-CceE
Confidence 34689999999999999999999764 46799999876542 346789999999999 59999999999876 6789
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|||||++|+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 255 iv~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~ 316 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGE---------------TGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---EN 316 (452)
T ss_dssp EEECCCTTCBHHHHHSHH---------------HHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GG
T ss_pred EEehhhcCCCHHHHHHhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEC---CC
Confidence 999999999999987532 124689999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCC--ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
+.+||+|||+++....... .....+|+.|+|||++. +.++.++|||||||++|+|++ |+.||.+....+....+..
T Consensus 317 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~ 396 (452)
T 1fmk_A 317 LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396 (452)
T ss_dssp GCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT
T ss_pred CCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 8899999999987653221 23345788999999876 456889999999999999999 9999999888888877766
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc--Ccccccc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVREG 376 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~--hp~f~~~ 376 (577)
+.. .+..+.+++.+.+||.+||..||.+|||+.++++ ..++...
T Consensus 397 ~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 397 GYR---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp TCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred CCC---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 532 2223568899999999999999999999999987 3555543
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=348.35 Aligned_cols=249 Identities=22% Similarity=0.261 Sum_probs=204.4
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEE-EcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF-EDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~-~~~~~ 171 (577)
.+|++.+.||+|+||.||+|.+..++ ..||+|.+.... .....+.+.+|+.+++++ +||||+++++++ ..++.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCCc
Confidence 47999999999999999999875433 368999886533 244567899999999999 599999999985 45678
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.|+||||+++|+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 102 ~~~v~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~--- 162 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRN----------------ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD--- 162 (298)
T ss_dssp CEEEEECCTTCBHHHHHHC----------------TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---
T ss_pred eEEEEeCCCCCCHHHHHHh----------------cccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEC---
Confidence 8999999999999987742 235689999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCC-----CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++ |.+||.+....+..
T Consensus 163 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~ 242 (298)
T 3f66_A 163 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 242 (298)
T ss_dssp TTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH
T ss_pred CCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH
Confidence 47899999999998664322 1234568889999998865 45889999999999999999 67777777777777
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+........ ...+++.+.++|.+||..||.+|||+.++++
T Consensus 243 ~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 243 VYLLQGRRLLQ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp HHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhcCCCCCC---CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 77766544322 2457899999999999999999999999876
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=344.95 Aligned_cols=248 Identities=22% Similarity=0.269 Sum_probs=203.7
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE-
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV- 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~- 172 (577)
.|.+.+.||+|+||.||+|.+..++. .||+|.+.... .....+.+.+|+.+++.+ +||||+++++++...+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCc
Confidence 58888999999999999999766554 79999986533 344567889999999999 599999999999866554
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++||||+.+|+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 99 ~~v~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~---~ 159 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRS----------------PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD---E 159 (298)
T ss_dssp EEEECCCTTCBHHHHHHC----------------TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---T
T ss_pred EEEEecccCCCHHHHHhc----------------cccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---C
Confidence 999999999999987742 236789999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCC-----CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCC-CCCCCChhHHHH
Q 008127 253 DSSLKATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR-PFWDKTEDGIFK 325 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~-Pf~~~~~~~~~~ 325 (577)
++.+||+|||++...... .......+|+.|+|||++.+ .++.++|||||||++|+|++|.. ||......+...
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~ 239 (298)
T 3pls_A 160 SFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTH 239 (298)
T ss_dssp TCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHH
T ss_pred CCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHH
Confidence 789999999999865432 22234578999999999876 45889999999999999999554 455556656655
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+...... .....+++.+.+||.+||..||.+|||+.++++
T Consensus 240 ~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 240 FLAQGRRL---PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp HHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhhcCCCC---CCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 55554322 123457899999999999999999999999876
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-43 Score=345.79 Aligned_cols=243 Identities=22% Similarity=0.324 Sum_probs=197.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-CCeEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNYVYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~~~l 174 (577)
++|++.+.||+|+||.||+|.+ +|+.||||++.... ..+.+.+|+.+++++ +||||+++++++.. .+.+|+
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEE
T ss_pred hhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-----HHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceEE
Confidence 5799999999999999999976 48899999986543 456789999999999 59999999998754 457899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++ .++
T Consensus 93 v~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~ 154 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRG---------------RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDN 154 (278)
T ss_dssp EECCCTTEEHHHHHHHHH---------------HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTS
T ss_pred EEecCCCCCHHHHHHhcc---------------cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe---CCC
Confidence 999999999999885431 12378899999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||++...... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||......+....+..+..
T Consensus 155 ~~~l~Dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~ 232 (278)
T 1byg_A 155 VAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 232 (278)
T ss_dssp CEEECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC
T ss_pred cEEEeecccccccccc--ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC
Confidence 9999999999865432 233468899999998865 46889999999999999998 9999988887777777655422
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
......+++.+.++|.+||..||.+|||+.++++
T Consensus 233 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 233 ---MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence 2233568899999999999999999999999875
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-43 Score=352.67 Aligned_cols=252 Identities=23% Similarity=0.303 Sum_probs=202.9
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEeccccc-CchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM-ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
|..++.||+|+||.||+|.+ +++.||||++..... ......+.+.+|+.+++.+ +||||+++++++...+.+++||
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 109 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSDGDDLCLVY 109 (307)
T ss_dssp TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEE
T ss_pred cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEEecCCceEEEE
Confidence 55668999999999999974 688999999865422 2234567899999999999 5999999999999999999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCe
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~v 256 (577)
||+++|+|.+++... .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 110 e~~~~~~L~~~l~~~--------------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~ 172 (307)
T 2nru_A 110 VYMPNGSLLDRLSCL--------------DGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD---EAFTA 172 (307)
T ss_dssp ECCTTCBHHHHHHTG--------------GGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCE
T ss_pred EecCCCcHHHHHHhc--------------cCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEc---CCCcE
Confidence 999999999877432 1345689999999999999999999999999999999999998 47899
Q ss_pred eEEecCCCcccCCCCC---ccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhH----HHHHHHh
Q 008127 257 KATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG----IFKEVLR 329 (577)
Q Consensus 257 kl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~----~~~~i~~ 329 (577)
||+|||++........ .....||+.|+|||++.+.++.++|||||||++|+|++|..||.+..... +...+..
T Consensus 173 kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 252 (307)
T 2nru_A 173 KISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 252 (307)
T ss_dssp EECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHT
T ss_pred EEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhh
Confidence 9999999976543221 23457999999999998888999999999999999999999997654432 2222222
Q ss_pred CCCCC-------CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDF-------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~-------~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
....+ ........+..+.+++.+||..||.+|||+.++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~ 299 (307)
T 2nru_A 253 EEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299 (307)
T ss_dssp TSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 11100 01111224467899999999999999999999986
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-43 Score=372.20 Aligned_cols=255 Identities=18% Similarity=0.278 Sum_probs=206.8
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.++|++++.||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.|.+|++|+.+..++...+..
T Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~ 78 (483)
T 3sv0_A 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYN 78 (483)
T ss_dssp EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEE
T ss_pred CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEE
Confidence 355789999999999999999999999999999998765432 234788999999998667888888888888999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
+|||||+ +++|.+++... ...+++..++.++.||+.||.|||++|||||||||+||||+..+.
T Consensus 79 ~lvme~~-g~sL~~ll~~~----------------~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 141 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNFC----------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 141 (483)
T ss_dssp EEEEECC-CCBHHHHHHHT----------------TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGG
T ss_pred EEEEECC-CCCHHHHHHhh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCC
Confidence 9999999 99999877432 367999999999999999999999999999999999999953335
Q ss_pred CCCeeEEecCCCcccCCCCC--------ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCCh---
Q 008127 253 DSSLKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--- 320 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~--- 320 (577)
++.+||+|||+++....... ....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+...
T Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~ 221 (483)
T 3sv0_A 142 ANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK 221 (483)
T ss_dssp TTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH
T ss_pred CCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH
Confidence 78999999999987654322 225689999999998875 458899999999999999999999987543
Q ss_pred hHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 321 DGIFKEVLRNKPDF-RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 321 ~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+..+....... ....+..+++++.+||..||..||.+||++.++++
T Consensus 222 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 222 KQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 33333332221110 01112457899999999999999999999998765
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-43 Score=352.26 Aligned_cols=250 Identities=26% Similarity=0.352 Sum_probs=201.6
Q ss_pred cccce-eeeeeecccCCeEEEEEEE----cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 94 FDRRY-TIGKLLGHGQFGYTYVATD----KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 94 ~~~~y-~~~~~lG~G~fg~V~~~~~----~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
+..+| ++++.||+|+||.||++.. ..+|+.||||++.... .......+.+|+.+++++. ||||+++++++..
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 104 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLY-HEHIIKYKGCCED 104 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEE
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCC-CcchhhEEEEEec
Confidence 44556 9999999999999988753 4578999999987653 2445678999999999995 9999999999987
Q ss_pred --CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 169 --DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 169 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
...+++||||+++|+|.+++. ...+++..++.++.||+.||.|||+.||+||||||+|||
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~------------------~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil 166 (318)
T 3lxp_A 105 AGAASLQLVMEYVPLGSLRDYLP------------------RHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVL 166 (318)
T ss_dssp TTTTEEEEEECCCTTCBHHHHGG------------------GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred CCCceEEEEEecccCCcHHHHHh------------------hCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEE
Confidence 468999999999999988662 245899999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED 321 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 321 (577)
++ .++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..||......
T Consensus 167 ~~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~ 243 (318)
T 3lxp_A 167 LD---NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK 243 (318)
T ss_dssp EC---TTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH
T ss_pred Ec---CCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh
Confidence 98 478899999999987654432 234568889999998875 4578999999999999999999999653221
Q ss_pred --------------HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 322 --------------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 322 --------------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
......+..... ......+++++.+||.+||..||.+|||+.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 244 FLELIGIAQGQMTVLRLTELLERGER--LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHHHCSCCHHHHHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhhhcccccchhHHHHHHHHhcccC--CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 011222222222 2223568899999999999999999999999975
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-43 Score=361.65 Aligned_cols=250 Identities=22% Similarity=0.255 Sum_probs=198.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE-cCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE-DDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-~~~~ 171 (577)
..|++.+.||+|+||.||+|.+..++ ..||||.+.... .....+.+.+|+.+++++ +||||+++++++. .++.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~ 165 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGS 165 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCC
Confidence 35899999999999999999876443 468999886532 234567899999999999 5999999999875 4568
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
.|+||||+++|+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 166 ~~lv~e~~~~g~L~~~l~~----------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~--- 226 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRN----------------ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD--- 226 (373)
T ss_dssp CEEEEECCTTCBHHHHHHC----------------TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---
T ss_pred eEEEEECCCCCCHHHHHhh----------------cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEEC---
Confidence 8999999999999987742 235688999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCC-----CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||+++...... ......+|+.|+|||++.+ .++.++|||||||++|+|++ |.+||.+.+..+..
T Consensus 227 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~ 306 (373)
T 3c1x_A 227 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 306 (373)
T ss_dssp TTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH
T ss_pred CCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH
Confidence 47899999999998654322 1234567889999998865 46889999999999999999 78888877777777
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..+..+..... ...+++.+.++|.+||..||.+|||+.+++++
T Consensus 307 ~~~~~~~~~~~---p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 307 VYLLQGRRLLQ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp HHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 66666543222 24678999999999999999999999999863
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-43 Score=359.31 Aligned_cols=251 Identities=21% Similarity=0.248 Sum_probs=197.7
Q ss_pred ccceeeeeeecccCCeEEEEE-----EEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFE 167 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~-----~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~ 167 (577)
.++|.+.+.||+|+||.||+| .+..+++.||||++... ....+.+|+.+++.+. .||||+.+++++.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 467999999999999999999 46778999999998654 2456778888888874 2899999999999
Q ss_pred cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 168 DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
..+..|+|||||++|+|.+++.... ......+++..++.++.||+.||.|||++|||||||||+|||+
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll 205 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYK------------NTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFIL 205 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHH------------TSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhh------------cccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEe
Confidence 9999999999999999999886431 1124679999999999999999999999999999999999999
Q ss_pred ec--------CCCCCCeeEEecCCCcccC---CCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCC
Q 008127 248 KS--------AKEDSSLKATDFGLSDFIK---PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPF 315 (577)
Q Consensus 248 ~~--------~~~~~~vkl~DFGla~~~~---~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf 315 (577)
+. ...++.+||+|||+|+.+. ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||
T Consensus 206 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf 285 (365)
T 3e7e_A 206 GNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMK 285 (365)
T ss_dssp CGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCC
T ss_pred cccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcc
Confidence 74 1226899999999996543 33344567899999999998765 589999999999999999999999
Q ss_pred CCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCc
Q 008127 316 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371 (577)
Q Consensus 316 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp 371 (577)
......... ....+.. ...++.+.+++..||..+|.+|++..+.+.+.
T Consensus 286 ~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~ 333 (365)
T 3e7e_A 286 VKNEGGECK-----PEGLFRR---LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQK 333 (365)
T ss_dssp EEEETTEEE-----ECSCCTT---CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred ccCCCCcee-----echhccc---cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence 654321100 0111111 12457789999999999999997655555533
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=347.64 Aligned_cols=242 Identities=27% Similarity=0.411 Sum_probs=192.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||.||+|.+ +++.||||.+... ...+.+.+|+.+++++ +||||+++++++.+ ..|+|
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~--~~~lv 77 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE-----SERKAFIVELRQLSRV-NHPNIVKLYGACLN--PVCLV 77 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST-----THHHHHHHHHHHHHHC-CCTTBCCEEEBCTT--TTEEE
T ss_pred hHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh-----hHHHHHHHHHHHHhcC-CCCCcCeEEEEEcC--CcEEE
Confidence 4799999999999999999986 4789999998643 2457789999999999 59999999998874 47899
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---cCceeccCCCCcEEeecCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~---~~iiHrDlKp~NILl~~~~~ 252 (577)
|||+++|+|.+++... .....++...++.++.||+.||.|||+ +||+||||||+|||++.
T Consensus 78 ~e~~~~~~L~~~l~~~--------------~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~--- 140 (307)
T 2eva_A 78 MEYAEGGSLYNVLHGA--------------EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA--- 140 (307)
T ss_dssp EECCTTCBHHHHHHCS--------------SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEET---
T ss_pred EEcCCCCCHHHHHhcc--------------CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeC---
Confidence 9999999999877432 011347889999999999999999999 89999999999999984
Q ss_pred CCC-eeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChh--HHHHHHH
Q 008127 253 DSS-LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVL 328 (577)
Q Consensus 253 ~~~-vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~--~~~~~i~ 328 (577)
++. +||+|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||...... .....+.
T Consensus 141 ~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 218 (307)
T 2eva_A 141 GGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH 218 (307)
T ss_dssp TTTEEEECCCCC--------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHH
T ss_pred CCCEEEEcccccccccccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHh
Confidence 444 899999999765432 234579999999998876 4588999999999999999999999764332 2333333
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.... ......+++.+.+||.+||..||.+|||+.++++
T Consensus 219 ~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 219 NGTR---PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp TTCC---CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCC---CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 3221 2233568899999999999999999999999987
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-43 Score=355.29 Aligned_cols=261 Identities=19% Similarity=0.255 Sum_probs=203.2
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
...++|++.+.||+|+||.||+|.+ .+|+.||||++...... .....+.+|+.+++.+. ||||+++++++...+..
T Consensus 27 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~ 102 (326)
T 3uim_A 27 VASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQ--GGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTER 102 (326)
T ss_dssp TTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-------CCCHHHHHHHGGGTCC-CTTBCCCCEEECCSSCC
T ss_pred HHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCc--hHHHHHHHHHHHHHhcc-CCCccceEEEEecCCce
Confidence 3557899999999999999999974 46899999998764321 12235889999999995 99999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc---CceeccCCCCcEEeec
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKS 249 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~---~iiHrDlKp~NILl~~ 249 (577)
++|||||++|+|.+.+... ......+++..++.++.||+.||.|||++ ||+||||||+|||++
T Consensus 103 ~lv~e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~- 168 (326)
T 3uim_A 103 LLVYPYMANGSVASCLRER-------------PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD- 168 (326)
T ss_dssp EEEEECCTTCBHHHHHHCC-------------STTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC-
T ss_pred EEEEEeccCCCHHHHHHhc-------------cccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC-
Confidence 9999999999999877532 11234599999999999999999999999 999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCC--CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCC----CChhH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWD----KTEDG 322 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~----~~~~~ 322 (577)
.++.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.. .....
T Consensus 169 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 246 (326)
T 3uim_A 169 --EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246 (326)
T ss_dssp --TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCS
T ss_pred --CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccch
Confidence 47899999999998764322 2344569999999998864 458899999999999999999999952 11111
Q ss_pred HHHHHHhCCCC---C--------CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 323 IFKEVLRNKPD---F--------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 323 ~~~~i~~~~~~---~--------~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
........... . .....+..++.+.+++.+||+.||.+|||+.++++|-.-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 247 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp BHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 11122211100 0 000111233678999999999999999999999998763
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-44 Score=362.62 Aligned_cols=250 Identities=17% Similarity=0.223 Sum_probs=196.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC-----chhhHHHHHHHHHHHHHhc--------CCCCeeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-----LPIAVEDVKREVKILQALA--------GHENVVKF 162 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-----~~~~~~~~~~E~~~l~~l~--------~hpniv~~ 162 (577)
++|++++.||+|+||.||+|++ +|+.||||++...... .....+.+.+|+.+++.+. .||||+++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 5799999999999999999987 7899999999765321 2234577899999999986 48888888
Q ss_pred EEEEE------------------------------cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCC
Q 008127 163 YNAFE------------------------------DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212 (577)
Q Consensus 163 ~~~~~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 212 (577)
.+++. ..+.+|||||||++|++++.+. ...++
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~------------------~~~~~ 159 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR------------------TKLSS 159 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT------------------TTCCC
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH------------------hcCCC
Confidence 87653 2678999999999998876441 25689
Q ss_pred HHHHHHHHHHHHHHHHHHH-hcCceeccCCCCcEEeecCC-----------------CCCCeeEEecCCCcccCCCCCcc
Q 008127 213 EKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAK-----------------EDSSLKATDFGLSDFIKPGKKFQ 274 (577)
Q Consensus 213 ~~~~~~i~~qil~~l~~LH-~~~iiHrDlKp~NILl~~~~-----------------~~~~vkl~DFGla~~~~~~~~~~ 274 (577)
+..++.++.||+.||.||| ++|||||||||+|||++..+ ....+||+|||+|+.....
T Consensus 160 ~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---- 235 (336)
T 2vuw_A 160 LATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---- 235 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----
Confidence 9999999999999999999 99999999999999998522 0128999999999876532
Q ss_pred ccccCCccccchhcccCCCCCCchhhHHHH-HHHHHhCCCCCCCCCh-hHHHHHHHhCCC---CCCCCCCCCCCHHHHHH
Q 008127 275 DIVGSAYYVAPEVLKRKSGPESDVWSIGVI-TYILLCGRRPFWDKTE-DGIFKEVLRNKP---DFRRKPWPSISNSAKDF 349 (577)
Q Consensus 275 ~~~gt~~y~aPE~~~~~~~~~~DiwSlG~i-l~el~tg~~Pf~~~~~-~~~~~~i~~~~~---~~~~~~~~~~s~~~~~l 349 (577)
..+||+.|+|||++.+..+.++||||||++ .+++++|..||.+... ......+..... ......++.+|+++.+|
T Consensus 236 ~~~gt~~y~aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dl 315 (336)
T 2vuw_A 236 IVVFCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEF 315 (336)
T ss_dssp EEECCCCTTCSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHH
T ss_pred cEEEeecccChhhhcCCCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHH
Confidence 458999999999998877889999998777 7788899999843211 112233332211 11111133577899999
Q ss_pred HHHccccCcCCCCCHHHHh-cCcccc
Q 008127 350 VKKLLVKDPRARLTAAQAL-SHPWVR 374 (577)
Q Consensus 350 i~~~l~~dP~~Rpt~~~il-~hp~f~ 374 (577)
|.+||++| |+.++| +||||+
T Consensus 316 i~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 316 HRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp HHHGGGSS-----SHHHHHHHCGGGC
T ss_pred HHHHhccC-----CHHHHHhcCCCcC
Confidence 99999976 999999 999996
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=373.19 Aligned_cols=254 Identities=25% Similarity=0.354 Sum_probs=212.5
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
..++|++.+.||+|+||.||+|.+.. +..||||++..... ..+.+.+|+.+|++|. ||||+++++++.. +.+|
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-hpniv~~~~~~~~-~~~~ 337 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIY 337 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS----CHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCE
T ss_pred chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC----CHHHHHHHHHHHHhCC-CCCEeeEEEEEee-ccce
Confidence 34689999999999999999999764 46799999976542 3467899999999995 9999999999876 6789
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||||||++|+|.+++... ....+++..++.++.||+.||.|||++|||||||||+|||++ .+
T Consensus 338 lv~e~~~~gsL~~~l~~~---------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~ 399 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGE---------------TGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---EN 399 (535)
T ss_dssp EEECCCTTEEHHHHHSHH---------------HHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GG
T ss_pred EeeehhcCCcHHHHHhhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc---CC
Confidence 999999999999988532 124589999999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCC--CccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008127 254 SSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~ 329 (577)
+.+||+|||+++...... ......+|..|+|||++. +.++.++|||||||++|||++ |+.||.+....+++..+..
T Consensus 400 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~ 479 (535)
T 2h8h_A 400 LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479 (535)
T ss_dssp GCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHT
T ss_pred CcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 789999999998764321 122345778999999876 456889999999999999999 9999999888888877766
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC--ccccc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH--PWVRE 375 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h--p~f~~ 375 (577)
+.. ......++..+.+||.+||..||++|||+.++++. .+|..
T Consensus 480 ~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 480 GYR---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp TCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred CCC---CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 532 22235688999999999999999999999999873 55544
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-42 Score=376.97 Aligned_cols=246 Identities=22% Similarity=0.291 Sum_probs=203.3
Q ss_pred eee-eeeecccCCeEEEEEEE--cCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 98 YTI-GKLLGHGQFGYTYVATD--KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 98 y~~-~~~lG~G~fg~V~~~~~--~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
+.+ .+.||+|+||.||+|.+ ..+++.||||++..... .....+.+.+|+.++++|. |||||++++++..+ .+++
T Consensus 370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~-~~~l 446 (635)
T 4fl3_A 370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLD-NPYIVRMIGICEAE-SWML 446 (635)
T ss_dssp EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-CGGGHHHHHHHHHHHHHCC-CTTBCCEEEEEESS-SEEE
T ss_pred ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC-CEEE
Confidence 444 34899999999999955 45678999999875432 2345678999999999994 99999999999754 5889
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||++|+|.+++.. ...+++..++.++.||+.||.|||++|||||||||+|||++. ++
T Consensus 447 v~E~~~~g~L~~~l~~-----------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~---~~ 506 (635)
T 4fl3_A 447 VMEMAELGPLNKYLQQ-----------------NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT---QH 506 (635)
T ss_dssp EEECCTTEEHHHHHHH-----------------CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---TT
T ss_pred EEEccCCCCHHHHHhh-----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeC---CC
Confidence 9999999999987743 367899999999999999999999999999999999999984 77
Q ss_pred CeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 255 SLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
.+||+|||+|+.+..... .....||+.|+|||++.+ .++.++|||||||++|||++ |+.||.+....++...+.
T Consensus 507 ~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~ 586 (635)
T 4fl3_A 507 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586 (635)
T ss_dssp EEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred CEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 899999999987654322 223457889999998875 56889999999999999998 999999998888888777
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+... .....+++++.+||.+||..||.+|||+.++++
T Consensus 587 ~~~~~---~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 587 KGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp TTCCC---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred cCCCC---CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 65432 223568899999999999999999999999875
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-42 Score=350.08 Aligned_cols=251 Identities=22% Similarity=0.334 Sum_probs=193.6
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHh-cCCCCeeEEEEEEEcC
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDD 169 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~~hpniv~~~~~~~~~ 169 (577)
...+.++|++.+.||+|+||.||+|++. |+.||||++... ....+.+|.+++..+ .+||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 3456678999999999999999999864 899999998543 223445566665544 2699999999999876
Q ss_pred ----CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--------Ccee
Q 008127 170 ----NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH--------GLVH 237 (577)
Q Consensus 170 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~--------~iiH 237 (577)
..+|+|||||++|+|.+++.. ..+++..++.++.||+.||.|||++ ||+|
T Consensus 104 ~~~~~~~~lv~e~~~~g~L~~~l~~------------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH 165 (337)
T 3mdy_A 104 TGSWTQLYLITDYHENGSLYDYLKS------------------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAH 165 (337)
T ss_dssp CGGGCEEEEEECCCTTCBHHHHHHH------------------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEEC
T ss_pred CCCCCceEEEEeccCCCcHHHHhhc------------------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEe
Confidence 789999999999999987732 4689999999999999999999998 9999
Q ss_pred ccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCC-----ccccccCCccccchhcccCC-CCC------CchhhHHHHH
Q 008127 238 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRKS-GPE------SDVWSIGVIT 305 (577)
Q Consensus 238 rDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~-~~~------~DiwSlG~il 305 (577)
|||||+|||++ .++.+||+|||+|........ ....+||+.|+|||++.+.. ... +|||||||++
T Consensus 166 ~Dikp~Nill~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il 242 (337)
T 3mdy_A 166 RDLKSKNILVK---KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL 242 (337)
T ss_dssp SCCCGGGEEEC---TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHH
T ss_pred cccchHHEEEC---CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHH
Confidence 99999999998 478999999999976543322 12458999999999987654 333 8999999999
Q ss_pred HHHHhC----------CCCCCCCCh----hHHHHHHHhC-CCCCCCCC---CCCCCHHHHHHHHHccccCcCCCCCHHHH
Q 008127 306 YILLCG----------RRPFWDKTE----DGIFKEVLRN-KPDFRRKP---WPSISNSAKDFVKKLLVKDPRARLTAAQA 367 (577)
Q Consensus 306 ~el~tg----------~~Pf~~~~~----~~~~~~i~~~-~~~~~~~~---~~~~s~~~~~li~~~l~~dP~~Rpt~~~i 367 (577)
|+|++| ..||..... .......... ......+. ...+++++.+||.+||..||.+|||+.++
T Consensus 243 ~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 322 (337)
T 3mdy_A 243 WEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322 (337)
T ss_dssp HHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHH
Confidence 999999 777754321 2222222221 11111100 01355679999999999999999999999
Q ss_pred hcC
Q 008127 368 LSH 370 (577)
Q Consensus 368 l~h 370 (577)
++|
T Consensus 323 l~~ 325 (337)
T 3mdy_A 323 KKT 325 (337)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-42 Score=375.61 Aligned_cols=248 Identities=21% Similarity=0.305 Sum_probs=203.8
Q ss_pred cceeeee-eecccCCeEEEEEEEcC--CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGK-LLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~-~lG~G~fg~V~~~~~~~--~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.++.+.. .||+|+||.||+|.++. ++..||||++..... ....+.+.+|+.+|+++ +|||||++++++.. +.+
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~ 410 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EAL 410 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS--STTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC--hHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCe
Confidence 3566665 89999999999998763 566799999876432 33567899999999999 59999999999986 569
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||||++|+|.+++.. ....+++..++.++.||+.||.|||++|||||||||+|||++.
T Consensus 411 ~lv~E~~~~g~L~~~l~~----------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~--- 471 (613)
T 2ozo_A 411 MLVMEMAGGGPLHKFLVG----------------KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVN--- 471 (613)
T ss_dssp EEEEECCTTCBHHHHHTT----------------CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---
T ss_pred EEEEEeCCCCcHHHHHhh----------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcC---
Confidence 999999999999887632 2356899999999999999999999999999999999999984
Q ss_pred CCCeeEEecCCCcccCCCCCc----cccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
++.+||+|||+|+........ ....+|+.|+|||++. +.++.++|||||||++|||++ |+.||.+....++...
T Consensus 472 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~ 551 (613)
T 2ozo_A 472 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 551 (613)
T ss_dssp TTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHH
T ss_pred CCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence 789999999999876433221 2234668999999886 456889999999999999998 9999999888888887
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..+... ...+.+++++.+||.+||..||.+|||+.++++
T Consensus 552 i~~~~~~---~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 552 IEQGKRM---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp HHTTCCC---CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred HHcCCCC---CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 7765422 223568899999999999999999999999854
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-42 Score=346.98 Aligned_cols=250 Identities=23% Similarity=0.328 Sum_probs=202.2
Q ss_pred ccceeeeeeecccCCeEEEEEE----EcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
.++|++++.||+|+||.||+|+ +..+|+.||||++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 115 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAG 115 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC---SHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC--
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC---HHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecC
Confidence 4579999999999999999998 46689999999987643 34567899999999999 5999999999987643
Q ss_pred --eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 171 --YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~ 179 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKH----------------KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE 179 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHS----------------TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE
T ss_pred CCceEEEEECCCCCCHHHHHHhc----------------ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEc
Confidence 789999999999999877532 35689999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCC----ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCCh---
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE--- 320 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~--- 320 (577)
. ++.+||+|||++........ .....+|+.|+|||++.+. ++.++|||||||++|+|++|..||.....
T Consensus 180 ~---~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 256 (326)
T 2w1i_A 180 N---ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 256 (326)
T ss_dssp E---TTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH
T ss_pred C---CCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence 4 77899999999987654332 1234678889999988654 57899999999999999999999853211
Q ss_pred ---------hH---HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 321 ---------DG---IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 321 ---------~~---~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.. .+...+...... ...+.+++++.+||.+||..||.+|||+.++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 257 RMIGNDKQGQMIVFHLIELLKNNGRL--PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHCTTCCTHHHHHHHHHHHHTTCCC--CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhhccccchhhhHHHHHHHhhcCCCC--CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 111222222222 223568899999999999999999999999875
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-43 Score=366.03 Aligned_cols=255 Identities=19% Similarity=0.198 Sum_probs=194.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCC-CCe---------------
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-ENV--------------- 159 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h-pni--------------- 159 (577)
..|.+.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+. | +|+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~-~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLR-GIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGST-TCCSHHHHHHHTCBCCCCEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhc-cCCCHHHHHHhcccccchhh
Confidence 45889999999999999999999999999999987444333334677899999999885 4 221
Q ss_pred ------eEEEEEEEc-----CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Q 008127 160 ------VKFYNAFED-----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAA 228 (577)
Q Consensus 160 ------v~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~ 228 (577)
..+..++.. ...++++|+++ +++|.+.+..... .......+++..++.++.||+.||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~----------~~~~~~~l~~~~~~~i~~qi~~aL~ 225 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLS----------HSSTHKSLVHHARLQLTLQVIRLLA 225 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHH----------HTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhc----------ccccCCCCCHHHHHHHHHHHHHHHH
Confidence 111111221 22467888876 6899887742210 0112344677888999999999999
Q ss_pred HHHhcCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcc----------c-CCCCCCc
Q 008127 229 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----------R-KSGPESD 297 (577)
Q Consensus 229 ~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~----------~-~~~~~~D 297 (577)
|||++|||||||||+|||++ .++.+||+|||+++..... ....+| +.|+|||++. + .++.++|
T Consensus 226 ~LH~~~iiHrDiKp~NILl~---~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~D 299 (413)
T 3dzo_A 226 SLHHYGLVHTYLRPVDIVLD---QRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFD 299 (413)
T ss_dssp HHHHTTEECSCCCGGGEEEC---TTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHH
T ss_pred HHHhCCcccCCcccceEEEe---cCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhh
Confidence 99999999999999999998 4778999999998765432 455678 9999999883 2 2467899
Q ss_pred hhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 298 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 298 iwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
||||||++|+|++|+.||.+....+....++. .+..+|+.+.+||.+||..||.+|||+.++++||||+..
T Consensus 300 vwSlGvil~elltg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 300 TWTLGLAIYWIWCADLPNTDDAALGGSEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp HHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh--------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 99999999999999999987765544433322 234678999999999999999999999999999999763
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-42 Score=349.11 Aligned_cols=251 Identities=24% Similarity=0.344 Sum_probs=200.6
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHh-cCCCCeeEEEEEEEcC
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL-AGHENVVKFYNAFEDD 169 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~~hpniv~~~~~~~~~ 169 (577)
...+.++|++.+.||+|+||.||+|.+ +|+.||||++... ....+.+|++++..+ .+||||+++++++...
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 344667899999999999999999986 5899999998643 345678899999873 2699999999999877
Q ss_pred C----eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH--------hcCcee
Q 008127 170 N----YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH--------LHGLVH 237 (577)
Q Consensus 170 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH--------~~~iiH 237 (577)
. .+|+||||+++|+|.+++.. ..+++..++.++.||+.||.||| +.||+|
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~------------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH 170 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNR------------------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHH------------------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEEC
T ss_pred CCccceeEEEEeecCCCcHHHHHhc------------------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeee
Confidence 5 89999999999999987732 45889999999999999999999 899999
Q ss_pred ccCCCCcEEeecCCCCCCeeEEecCCCcccCCCC-----CccccccCCccccchhcccCC-------CCCCchhhHHHHH
Q 008127 238 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVIT 305 (577)
Q Consensus 238 rDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~~~~DiwSlG~il 305 (577)
|||||+|||++ .++.+||+|||++....... ......||+.|+|||++.+.. +.++|||||||++
T Consensus 171 ~Dlkp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il 247 (342)
T 1b6c_B 171 RDLKSKNILVK---KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 247 (342)
T ss_dssp SCCSGGGEEEC---TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEC---CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHH
Confidence 99999999998 47899999999997765433 224557999999999987653 2579999999999
Q ss_pred HHHHhC----------CCCCCCCC-----hhHHHHHHHhCCCCCCCC-CC--CCCCHHHHHHHHHccccCcCCCCCHHHH
Q 008127 306 YILLCG----------RRPFWDKT-----EDGIFKEVLRNKPDFRRK-PW--PSISNSAKDFVKKLLVKDPRARLTAAQA 367 (577)
Q Consensus 306 ~el~tg----------~~Pf~~~~-----~~~~~~~i~~~~~~~~~~-~~--~~~s~~~~~li~~~l~~dP~~Rpt~~~i 367 (577)
|+|++| ..||.... .......+.........+ .+ ...+..+.+||.+||..||.+|||+.++
T Consensus 248 ~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 327 (342)
T 1b6c_B 248 WEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 327 (342)
T ss_dssp HHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred HHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence 999999 78986642 233333333322211111 01 1233578999999999999999999999
Q ss_pred hcC
Q 008127 368 LSH 370 (577)
Q Consensus 368 l~h 370 (577)
++|
T Consensus 328 ~~~ 330 (342)
T 1b6c_B 328 KKT 330 (342)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=348.62 Aligned_cols=248 Identities=23% Similarity=0.339 Sum_probs=203.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++.+.||+|+||.||+|.+.. .||+|++...... ....+.+.+|+.+++++ +||||+++++++...+.+++
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDN-EDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCC-CCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEE
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCC-HHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEE
Confidence 4579999999999999999998753 4999998654321 22335577899999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
||||+++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++ ++
T Consensus 107 v~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~----~~ 166 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRD----------------AKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD----NG 166 (319)
T ss_dssp ECBCCCSEEHHHHTTS----------------SCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------
T ss_pred EeecccCCcHHHHHHh----------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe----CC
Confidence 9999999999886632 234689999999999999999999999999999999999997 56
Q ss_pred CeeEEecCCCcccCC------CCCccccccCCccccchhccc----------CCCCCCchhhHHHHHHHHHhCCCCCCCC
Q 008127 255 SLKATDFGLSDFIKP------GKKFQDIVGSAYYVAPEVLKR----------KSGPESDVWSIGVITYILLCGRRPFWDK 318 (577)
Q Consensus 255 ~vkl~DFGla~~~~~------~~~~~~~~gt~~y~aPE~~~~----------~~~~~~DiwSlG~il~el~tg~~Pf~~~ 318 (577)
.+||+|||++..... ........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.
T Consensus 167 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 246 (319)
T 2y4i_B 167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246 (319)
T ss_dssp CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC
T ss_pred CEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 899999999875431 122334569999999998864 2477899999999999999999999988
Q ss_pred ChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 319 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 319 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
........+..+.... .....++.++.+||.+||..||.+|||+.++++
T Consensus 247 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 247 PAEAIIWQMGTGMKPN--LSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp CHHHHHHHHHTTCCCC--CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHhccCCCCC--CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 8887777776654322 222357889999999999999999999999987
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-42 Score=349.32 Aligned_cols=251 Identities=24% Similarity=0.355 Sum_probs=187.5
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHH--HHhcCCCCeeEEEEEEE-----c
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL--QALAGHENVVKFYNAFE-----D 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l--~~l~~hpniv~~~~~~~-----~ 168 (577)
++|++++.||+|+||.||+|++ +++.||||++.... ...+..|.+++ ..+ +||||+++++.+. .
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLM-EHDNIARFIVGDERVTADG 83 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECTTS
T ss_pred HHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhc-cCcchhhheecccccccCC
Confidence 4799999999999999999965 78999999986542 23344454443 345 6999999998654 2
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc---------Cceecc
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLH---------GLVHRD 239 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~---------~iiHrD 239 (577)
...+|+|||||++|+|.+++.. ..+++..++.++.||+.||.|||+. ||+|||
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~------------------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~D 145 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSL------------------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRD 145 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHH------------------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSS
T ss_pred CceEEEEEecCCCCcHHHHHhh------------------cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecc
Confidence 3468999999999999987743 3458888999999999999999999 999999
Q ss_pred CCCCcEEeecCCCCCCeeEEecCCCcccCCCC---------CccccccCCccccchhcccC--------CCCCCchhhHH
Q 008127 240 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---------KFQDIVGSAYYVAPEVLKRK--------SGPESDVWSIG 302 (577)
Q Consensus 240 lKp~NILl~~~~~~~~vkl~DFGla~~~~~~~---------~~~~~~gt~~y~aPE~~~~~--------~~~~~DiwSlG 302 (577)
|||+|||++ .++.+||+|||++....... .....+||+.|+|||++.+. ++.++||||||
T Consensus 146 ikp~Nill~---~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 222 (336)
T 3g2f_A 146 LNSRNVLVK---NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG 222 (336)
T ss_dssp CSGGGEEEC---TTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHH
T ss_pred cccceEEEc---CCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHH
Confidence 999999998 46899999999997654321 12345799999999998752 35689999999
Q ss_pred HHHHHHHhCCCCCCCCCh-----------------hHHHHHHHhCC---CCCCCCCCC---CCCHHHHHHHHHccccCcC
Q 008127 303 VITYILLCGRRPFWDKTE-----------------DGIFKEVLRNK---PDFRRKPWP---SISNSAKDFVKKLLVKDPR 359 (577)
Q Consensus 303 ~il~el~tg~~Pf~~~~~-----------------~~~~~~i~~~~---~~~~~~~~~---~~s~~~~~li~~~l~~dP~ 359 (577)
|++|+|++|..||..... ........... +.++ ..|+ .+++.+.+||.+||..||.
T Consensus 223 ~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~ 301 (336)
T 3g2f_A 223 LIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFP-EAWKENSLAVRSLKETIEDCWDQDAE 301 (336)
T ss_dssp HHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCC-TTCCCCSHHHHHHHHHHHHHSCSSGG
T ss_pred HHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCC-cccccccchHHHHHHHHHHHhcCChh
Confidence 999999999777643211 11111121111 1111 1111 1445799999999999999
Q ss_pred CCCCHHHHh------cCccccccC
Q 008127 360 ARLTAAQAL------SHPWVREGG 377 (577)
Q Consensus 360 ~Rpt~~~il------~hp~f~~~~ 377 (577)
+|||+.+++ -++|-++..
T Consensus 302 ~Rps~~e~l~~L~~ll~~~~~~~~ 325 (336)
T 3g2f_A 302 ARLTAQXAEERMAELMMIWERNKS 325 (336)
T ss_dssp GSCCHHHHHHHHHHHHHCCCC---
T ss_pred hCcchHHHHHHHHHHHHHHHhccc
Confidence 999999994 467766543
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=370.97 Aligned_cols=249 Identities=23% Similarity=0.347 Sum_probs=207.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCC---CCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
.++|++.+.||+|+||.||+|.+..+ +..||||.+.... .....+.+.+|+.+++++ +||||+++++++. ++.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSS
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe-cCc
Confidence 46899999999999999999998654 4579999886532 234567899999999999 5999999999985 456
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|+|||||++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~----------------~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~-- 526 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVR----------------KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS-- 526 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHT----------------TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE--
T ss_pred eEEEEEcCCCCcHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeC--
Confidence 89999999999999877432 346899999999999999999999999999999999999984
Q ss_pred CCCCeeEEecCCCcccCCCCCc--cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i 327 (577)
++.+||+|||+++........ ....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+
T Consensus 527 -~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i 605 (656)
T 2j0j_A 527 -NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605 (656)
T ss_dssp -TTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred -CCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 788999999999876543322 23467889999998864 46889999999999999997 99999998888888887
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..+... ...+.+++.+.+||.+||..||.+|||+.++++
T Consensus 606 ~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 606 ENGERL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp HHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HcCCCC---CCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 765432 123568899999999999999999999999875
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-41 Score=335.93 Aligned_cols=228 Identities=15% Similarity=0.136 Sum_probs=188.1
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+.++|++.+.||+|+||.||+|++..+|+.||||++.............+.+|+.++..+ +||||+++++++...+.+
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~ 106 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGG 106 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcE
Confidence 4567899999999999999999999999999999999876554455668899999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||||+|++|.+++. ......++..++.||+.||.|||++||+||||||+|||++ .
T Consensus 107 ~lv~e~~~g~~L~~~l~-------------------~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~---~ 164 (286)
T 3uqc_A 107 LVVAEWIRGGSLQEVAD-------------------TSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS---I 164 (286)
T ss_dssp EEEEECCCEEEHHHHHT-------------------TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---T
T ss_pred EEEEEecCCCCHHHHHh-------------------cCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEc---C
Confidence 99999999999988662 1235667889999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH---HHHh
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK---EVLR 329 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~---~i~~ 329 (577)
++.+||+++| |++| ++.++|||||||++|+|++|+.||.+.+..+.+. ....
T Consensus 165 ~g~~kl~~~~-------------------~~~~------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~ 219 (286)
T 3uqc_A 165 DGDVVLAYPA-------------------TMPD------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTA 219 (286)
T ss_dssp TSCEEECSCC-------------------CCTT------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTT
T ss_pred CCCEEEEecc-------------------ccCC------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhc
Confidence 7889988543 3333 5778999999999999999999998765533111 1111
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 330 ~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
..........+.+++++.+||.+||..||.+| |+.++++
T Consensus 220 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 220 GQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp SCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred cCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 11111112235689999999999999999999 9999987
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=377.09 Aligned_cols=245 Identities=24% Similarity=0.365 Sum_probs=203.1
Q ss_pred ccccccceeeeeeecccCCeEEEEEEEcC-CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
...+.++|++.+.||+|+||.||+|.+.. +|+.||||++.... .......+.+|+.++.++ +||||+++++++...
T Consensus 75 g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~ 151 (681)
T 2pzi_A 75 GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHT 151 (681)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEE
T ss_pred CCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeec
Confidence 34566899999999999999999999976 78999999886542 234567789999999999 499999999999875
Q ss_pred Ce-----EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCc
Q 008127 170 NY-----VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 170 ~~-----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~N 244 (577)
+. .||||||++|++|.+.+ ...+++..++.++.||+.||.|||++|||||||||+|
T Consensus 152 ~~~~~~~~~lv~E~~~g~~L~~~~-------------------~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~N 212 (681)
T 2pzi_A 152 DRHGDPVGYIVMEYVGGQSLKRSK-------------------GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPEN 212 (681)
T ss_dssp CTTSCEEEEEEEECCCCEECC-----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred CCCCCceeEEEEEeCCCCcHHHHH-------------------hCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHH
Confidence 54 79999999999997744 1368999999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
||++. +.+||+|||+++..... ...+||+.|+|||++.+.++.++|||||||++|+|++|..||.+.....
T Consensus 213 Ill~~----~~~kl~DFG~a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-- 283 (681)
T 2pzi_A 213 IMLTE----EQLKLIDLGAVSRINSF---GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDG-- 283 (681)
T ss_dssp EEECS----SCEEECCCTTCEETTCC---SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSS--
T ss_pred eEEeC----CcEEEEecccchhcccC---CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccccc--
Confidence 99983 48999999999876543 4568999999999998888889999999999999999999986532110
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
.+ ........++.+.+||.+||..||.+||++.+++.|+|+.
T Consensus 284 ------~~--~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 284 ------LP--EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ------CC--TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ------cc--ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 00 0011112457899999999999999999999999999875
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=321.43 Aligned_cols=232 Identities=15% Similarity=0.095 Sum_probs=159.5
Q ss_pred eecccCCeEEEEEEEcCCCCEEEEEEecccccC-------chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-------LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 103 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-------~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
.++.|++|.+..++....|+.||||++.+.... .....+++.+|+++|+++.+||||+++++++++++.+|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 356788888888888889999999998754221 1234577999999999998899999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+|++|.+.|.. ..++++. .|+.||+.||.|||++|||||||||+|||++ .++.
T Consensus 321 MEyv~G~~L~d~i~~-----------------~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~---~dg~ 377 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA-----------------GEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVD---ARQH 377 (569)
T ss_dssp EECCCSEEHHHHHHT-----------------TCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEEC---TTSC
T ss_pred EecCCCCcHHHHHHh-----------------CCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEEC---CCCC
Confidence 999999999998753 3667654 4789999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
|||+|||+|+..... ....+.+||+.|||||++.+.+..++|+||+|+++++|.++..|+ ...+.. .+.
T Consensus 378 vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~--------~~~l~~-~~~- 447 (569)
T 4azs_A 378 ARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNW--------LYAVWQ-EPV- 447 (569)
T ss_dssp EEECCCTTEESCC---CCSHHHHHHHHHHHHHHC-----------------CCCCTTHHHH--------HHHHHT-SCG-
T ss_pred EEEeecccCeeCCCCCccccCceechhhccHHHhCCCCCCcccccccccchhhhccccchh--------HHHhhc-CCC-
Confidence 999999999876533 344567999999999999999889999999999999887765443 111111 111
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
.. ..+..+...++..+|..||.......++|..
T Consensus 448 --~~-----~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 480 (569)
T 4azs_A 448 --ER-----WNFVLLLALFEKKAKLPSAEQQRGATEQWII 480 (569)
T ss_dssp --GG-----CSHHHHHHHHHTGGGSCCGGGSSCCHHHHHH
T ss_pred --CC-----CcHHHHHHHHhCCCCCCCCChhhhccchhHH
Confidence 01 1245667777778888888776666666654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-28 Score=262.66 Aligned_cols=185 Identities=18% Similarity=0.168 Sum_probs=142.6
Q ss_pred eeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch-----hhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-----IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 99 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-----~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
...+.||+|+||.||+| ...+..+|+|.......... ...+.+.+|+++++++. ||||+++..++...+..|
T Consensus 339 ~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~ 415 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVK-DFGIPAPYIFDVDLDNKR 415 (540)
T ss_dssp ---------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGG-GGTCCCCCEEEEETTTTE
T ss_pred CCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcC-CCCcCceEEEEEeCCccE
Confidence 44668999999999999 45678999998755433222 12455899999999995 999995555555666779
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||||||+|++|.+++.. +..++.||+.||.|||++||+||||||+|||++ .
T Consensus 416 lVmE~~~ggsL~~~l~~-------------------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~----~ 466 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED-------------------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD----K 466 (540)
T ss_dssp EEEECCCSEEHHHHSTT-------------------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES----S
T ss_pred EEEECCCCCCHHHHHHH-------------------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC----C
Confidence 99999999999886521 568999999999999999999999999999998 3
Q ss_pred CCeeEEecCCCcccCCCCC--------ccccccCCccccchhccc---CCCCCCchhhHHHHHHHHHhCCCCCC
Q 008127 254 SSLKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFW 316 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~--------~~~~~gt~~y~aPE~~~~---~~~~~~DiwSlG~il~el~tg~~Pf~ 316 (577)
.+||+|||+|+....... ....+||+.|+|||++.. .|+..+|+||..+-..+.+.++.+|.
T Consensus 467 -~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 467 -DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp -SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred -eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 899999999988754322 135689999999999874 45778899999999998888877763
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=217.14 Aligned_cols=180 Identities=31% Similarity=0.496 Sum_probs=141.0
Q ss_pred cCccccccCCCCCCcccHHHHHhhHHhhhhhhhhHHHHHhhccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhh
Q 008127 369 SHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 448 (577)
Q Consensus 369 ~hp~f~~~~~~~~~~~~~~~~~~lk~~~~~s~l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~ 448 (577)
.|||.+... ....+++...+.++++|...+++++..+..+...++++++..++++|..+|.|++|.|+.+||..+|..
T Consensus 8 ~~~~~~~~~-~~~~~l~~~~~~~l~~f~~~~~lk~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~- 85 (197)
T 3pm8_A 8 SSGRENLYF-QGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKK- 85 (197)
T ss_dssp ----------CCSCCCCTTHHHHHHHTTTSCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-
T ss_pred cchHhhhcc-CCCCCCCHHHHHHHHHHHHccHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-
Confidence 589988654 456677888999999999999999999999999999999999999999999999999999999999954
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc-
Q 008127 449 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 527 (577)
Q Consensus 449 ~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 527 (577)
+|..+++.+++.+|+.+|.|++|.|+|+||+.++........ ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 86 ~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~------~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~ 159 (197)
T 3pm8_A 86 IGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLK------KEVCLIPFKFFDIDGNGKISVEELKRIFGRDD 159 (197)
T ss_dssp HC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCS------HHHHHHHHHHHCTTCSSEECHHHHHHHHC---
T ss_pred hCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhh------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc
Confidence 788889999999999999999999999999986654322211 2368889999999999999999999999877
Q ss_pred -C------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 528 -G------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 528 -~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
+ +++.+|+.+|.|+||.|+|+||+.+|++
T Consensus 160 ~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 160 IENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp -CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred cCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence 3 4899999999999999999999999975
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-26 Score=213.17 Aligned_cols=177 Identities=27% Similarity=0.430 Sum_probs=147.5
Q ss_pred cCccccccCCCCCCcccHHHHHhhHHhhhhhhhhHHHHHhhccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhh
Q 008127 369 SHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 448 (577)
Q Consensus 369 ~hp~f~~~~~~~~~~~~~~~~~~lk~~~~~s~l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~ 448 (577)
.|||+-... ....+++...+.+|++|...+++++..+..+...++++++++++++|..+|.|++|+|+.+||..+|. .
T Consensus 3 ~~~~~~~~~-~~~~~l~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~-~ 80 (191)
T 3k21_A 3 HHHHHSSGR-ENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLE-K 80 (191)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-H
T ss_pred CCccccCCc-cccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHH-H
Confidence 577776543 34456777899999999999999999999999999999999999999999999999999999999995 5
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC
Q 008127 449 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG 528 (577)
Q Consensus 449 ~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 528 (577)
+|..++ .++..+|..+|.|++|.|+|+||+.++..... .. ...++.+|+.+|+|++|+|+.+||+.++...+
T Consensus 81 ~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~----~~---~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~ 152 (191)
T 3k21_A 81 DGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQ----LS---KKLIYCAFRVFDVDNDGEITTAELAHILYNGN 152 (191)
T ss_dssp TTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGG----CC---HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSS
T ss_pred cCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhh----cc---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcC
Confidence 888888 89999999999999999999999987654321 11 23678899999999999999999999986522
Q ss_pred -----------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 529 -----------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 529 -----------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
++.++|..+|.|+||.|+|+||+.+|+
T Consensus 153 ~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 153 KKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp SCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred CCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 378999999999999999999999885
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-25 Score=220.03 Aligned_cols=159 Identities=24% Similarity=0.261 Sum_probs=122.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch---------------hhHHHHHHHHHHHHHhcCCCCeeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---------------IAVEDVKREVKILQALAGHENVVK 161 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~---------------~~~~~~~~E~~~l~~l~~hpniv~ 161 (577)
.|.+++.||+|+||.||+|.+ .+|+.||||++........ .....+.+|+.+++++. |++++.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~~~v~~ 168 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPK 168 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCC
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-CCCcCe
Confidence 466779999999999999998 8899999999864321100 23567899999999996 455544
Q ss_pred EEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCC
Q 008127 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 241 (577)
Q Consensus 162 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlK 241 (577)
++.. +..|+|||||+||+|.+ + .......++.||+.||.|||++||+|||||
T Consensus 169 ---~~~~-~~~~lvmE~~~g~~L~~-l-----------------------~~~~~~~i~~qi~~~l~~lH~~giiHrDlk 220 (282)
T 1zar_A 169 ---VYAW-EGNAVLMELIDAKELYR-V-----------------------RVENPDEVLDMILEEVAKFYHRGIVHGDLS 220 (282)
T ss_dssp ---EEEE-ETTEEEEECCCCEEGGG-C-----------------------CCSCHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred ---EEec-cceEEEEEecCCCcHHH-c-----------------------chhhHHHHHHHHHHHHHHHHHCCCEeCCCC
Confidence 4433 45699999999999976 2 112345799999999999999999999999
Q ss_pred CCcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-----------CCCCCCchhhH
Q 008127 242 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-----------KSGPESDVWSI 301 (577)
Q Consensus 242 p~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~DiwSl 301 (577)
|+|||++ ++.+||+|||+|+. +..|+|||++.. +++..+|+|.+
T Consensus 221 p~NILl~----~~~vkl~DFG~a~~------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~ 275 (282)
T 1zar_A 221 QYNVLVS----EEGIWIIDFPQSVE------------VGEEGWREILERDVRNIITYFSRTYRTEKDINSA 275 (282)
T ss_dssp TTSEEEE----TTEEEECCCTTCEE------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred HHHEEEE----CCcEEEEECCCCeE------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence 9999998 57899999999863 346789998742 34566676653
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=7e-25 Score=200.91 Aligned_cols=139 Identities=30% Similarity=0.509 Sum_probs=123.8
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++++++++|+++|..||+|++|+|+.+||..+| +.+|..+++.++..++..+|.|++|.|+|+||+..+......
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l-~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~-- 79 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKS-- 79 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHH-HHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCS--
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhccc--
Confidence 56889999999999999999999999999999999 458999999999999999999999999999999866532211
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
. .....++.+|+.||+|++|+|+.+||+.++...+ +++++|+.+| |+||+|+|+||+.+|.+
T Consensus 80 ~---~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k 147 (176)
T 2lhi_A 80 N---DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 147 (176)
T ss_dssp S---HHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred C---CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence 1 1234688999999999999999999999998877 4899999999 99999999999999975
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.91 E-value=8.8e-25 Score=194.51 Aligned_cols=139 Identities=30% Similarity=0.534 Sum_probs=123.5
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 491 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~ 491 (577)
.++++++++|+++|..+|+|++|+|+..||..++ +.+|..+++.++..++..+|.+++|.|+|.||+..+...... .
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l-~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~--~ 79 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLM-RTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRE--T 79 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHH-HHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTT--T
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHH-HhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcc--c
Confidence 5789999999999999999999999999999999 458999999999999999999999999999999876543221 1
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 492 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.. ...++.+|+.||+|++|+|+.+||+.++...| +++++|+.+|.|+||.|+|+||+.+|.+
T Consensus 80 ~~---~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 80 DT---EEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp TT---HHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred Cc---HHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 11 23688899999999999999999999998776 4899999999999999999999999975
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-24 Score=194.72 Aligned_cols=144 Identities=19% Similarity=0.319 Sum_probs=122.5
Q ss_pred ccchHHHhhhccccccccC--CCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 412 TLDDEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~--d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
+++++++++++++|..||. |++|+|+..||..+| +.+|..+++.++..++. .|.+++|.|+|+||+.++.......
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~l-r~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~ 79 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLL-RCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKD 79 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHH-HHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHH-HHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhccc
Confidence 5788999999999999995 899999999999999 56999999999998865 5778999999999998775433222
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCC--CCCCcccHHHHHHHHhhcccC
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADI--DKDGRISLSEFRRLLRTASIS 560 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~--d~dG~i~~~EF~~~l~~~~~~ 560 (577)
.... ...++.||+.||+|++|+|+.+||+.+|...| +++++++.+|. |+||+|+|+||+++|....+.
T Consensus 80 ~~~~---~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~p~p 155 (159)
T 3i5g_C 80 TGTA---ADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAGPFP 155 (159)
T ss_dssp TTCC---HHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHCSCC
T ss_pred ccch---HHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCCCCC
Confidence 1122 23688899999999999999999999998877 59999999995 899999999999999865443
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.4e-24 Score=213.28 Aligned_cols=140 Identities=29% Similarity=0.585 Sum_probs=122.9
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
.+++++++++|+++|+.||.|++|+|+.+||..+| +.+|..+++.+++.+|+.+|.|++|.|+|+||+.++..... .
T Consensus 294 E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aL-rsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk--~ 370 (440)
T 3u0k_A 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMK--D 370 (440)
T ss_dssp BCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHH-HHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC-----
T ss_pred hhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhc--C
Confidence 57899999999999999999999999999999999 56999999999999999999999999999999987654221 1
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
... ...++++|+.||+|++|+|+.+||+.++...+ +++++|+.+|.|+||.|+|+||+++|..
T Consensus 371 ~d~---eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMtS 439 (440)
T 3u0k_A 371 TDS---EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439 (440)
T ss_dssp ------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred CCh---HHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence 111 23678899999999999999999999998766 4899999999999999999999999864
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.90 E-value=6e-24 Score=187.89 Aligned_cols=135 Identities=27% Similarity=0.509 Sum_probs=118.9
Q ss_pred hHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccH
Q 008127 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 494 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~ 494 (577)
++++++++++|..||.|++|+|+.+||..+| +.+|..+++.++..++..+|.|++|.|+|+||+.++..... . .
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l-~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~--~---~ 75 (143)
T 2obh_A 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAM-RALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMS--E---K 75 (143)
T ss_dssp HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHH-HHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHH--H---H
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhc--c---c
Confidence 5678899999999999999999999999999 55999999999999999999999999999999987653211 1 1
Q ss_pred HHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 495 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 495 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
.....++.+|+.||+|++|+|+.+||+.++...| ++.++|+.+|.|+||.|+|+||+.+|.
T Consensus 76 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 76 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred cHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 1134688899999999999999999999987766 489999999999999999999999885
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-23 Score=189.58 Aligned_cols=163 Identities=29% Similarity=0.462 Sum_probs=140.4
Q ss_pred cHHHHHhhHHhhhhhhhhHHHHHhhccccc--hHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHH
Q 008127 385 DISVLNNMRQFVKYSRLKQFALRALASTLD--DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEIL 462 (577)
Q Consensus 385 ~~~~~~~lk~~~~~s~l~~~~l~~~~~~~~--~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~ 462 (577)
+...+.+|+.|...+.+++..+..+...++ ++++.+++++|..+|.|++|+|+.+||..+|. .+|.. +.++..+|
T Consensus 3 ~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~-~~g~~--~~~~~~~~ 79 (180)
T 3mse_B 3 SPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLA-SVGIK--KWDINRIL 79 (180)
T ss_dssp CHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHH-HTTCC--HHHHHHHH
T ss_pred CHHHHHHHHHHHHHhHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHH-HcCCC--HHHHHHHH
Confidence 457789999999999999999999988887 88999999999999999999999999999995 47754 58899999
Q ss_pred HhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhC
Q 008127 463 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEAD 538 (577)
Q Consensus 463 ~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D 538 (577)
..+|.|++|.|+|+||+.++....... ...++.+|+.+|+|++|+|+.+||+.++...+ +++++|..+|
T Consensus 80 ~~~D~d~~g~i~~~Ef~~~~~~~~~~~-------~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~d 152 (180)
T 3mse_B 80 QALDINDRGNITYTEFMAGCYRWKNIE-------STFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVH 152 (180)
T ss_dssp HHHCTTCCSEECHHHHHHHHSCCTTC---------CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred HHhCCCCCCcCcHHHHHHHHHhcccCC-------HHHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCCCHHHHHHHHHHhh
Confidence 999999999999999998765432211 12678899999999999999999999998433 5899999999
Q ss_pred CCCC--------CcccHHHHHHHHhhc
Q 008127 539 IDKD--------GRISLSEFRRLLRTA 557 (577)
Q Consensus 539 ~d~d--------G~i~~~EF~~~l~~~ 557 (577)
.|+| |.|+|+||+.+|...
T Consensus 153 ~~~d~~~~~~~~G~i~~~eF~~~l~~~ 179 (180)
T 3mse_B 153 SIKKGIPREHIINKISFQEFKDYMLST 179 (180)
T ss_dssp TC---------CCCBCHHHHHHHHHTT
T ss_pred hccCcccccccCCeeeHHHHHHHHHhc
Confidence 9999 999999999999753
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.3e-23 Score=193.40 Aligned_cols=168 Identities=31% Similarity=0.464 Sum_probs=145.5
Q ss_pred cccHHHHHhhHHhhhhhhhhHHHHHhhcccc-chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhC-----------C
Q 008127 383 PIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL-----------P 450 (577)
Q Consensus 383 ~~~~~~~~~lk~~~~~s~l~~~~l~~~~~~~-~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~-----------~ 450 (577)
+.....+.+++.|...+.+++..+..+...+ +++++.+++++|..+|.|++|.|+.+||..++.. + +
T Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~ 81 (191)
T 3khe_A 3 HALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRK-LMQWKGDTVSDLD 81 (191)
T ss_dssp CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HHC-----CCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH-HHhhccccccccc
Confidence 3456788999999999999999999998877 8899999999999999999999999999999954 4 5
Q ss_pred CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC--
Q 008127 451 WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 528 (577)
Q Consensus 451 ~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-- 528 (577)
..+++.++..+|..+|.|++|.|+|+||+.++....... . ...+..+|+.+|+|++|+|+.+||+.++....
T Consensus 82 ~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~---~---~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~ 155 (191)
T 3khe_A 82 SSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLL---S---RERLLAAFQQFDSDGSGKITNEELGRLFGVTEVD 155 (191)
T ss_dssp HHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHC---C---HHHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCC
T ss_pred chhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccc---h---HHHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCC
Confidence 667788999999999999999999999998765432211 1 23678899999999999999999999998222
Q ss_pred --cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 529 --SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 529 --~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
++..+|..+|.|+||.|+|+||+.+|...
T Consensus 156 ~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 186 (191)
T 3khe_A 156 DETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186 (191)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 48999999999999999999999999764
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.6e-23 Score=186.27 Aligned_cols=159 Identities=41% Similarity=0.709 Sum_probs=131.9
Q ss_pred HhhhhhhhhHHHHHhhccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcce
Q 008127 394 QFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473 (577)
Q Consensus 394 ~~~~~s~l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i 473 (577)
.|...+.+++..+..+...++++++.+++++|..+|.|++|.|+.+||..++. .+|..+++.++..+|..+|.|++|.|
T Consensus 2 ~f~~~~~~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i 80 (166)
T 2aao_A 2 QFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLK-RVGANLKESEILDLMQAADVDNSGTI 80 (166)
T ss_dssp ----CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGG-GGTCCCCHHHHHHHHHHHCTTCCSSB
T ss_pred chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCeE
Confidence 46667788888888888889999999999999999999999999999999995 48999999999999999999999999
Q ss_pred ehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHH
Q 008127 474 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSE 549 (577)
Q Consensus 474 ~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~E 549 (577)
+|+||+..+....... ....++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+|
T Consensus 81 ~~~ef~~~~~~~~~~~------~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~d~~~dg~i~~~e 154 (166)
T 2aao_A 81 DYKEFIAATLHLNKIE------REDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNE 154 (166)
T ss_dssp CHHHHHHHHTTCHHHH------TTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC--------CCHHHHHCTTCSSSBCHHH
T ss_pred cHHHHHHHHHHHhhcc------cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence 9999998765432211 123678899999999999999999999998765 478899999999999999999
Q ss_pred HHHHHhhccc
Q 008127 550 FRRLLRTASI 559 (577)
Q Consensus 550 F~~~l~~~~~ 559 (577)
|+.++.+.++
T Consensus 155 F~~~~~~~~~ 164 (166)
T 2aao_A 155 FVAMMQKGSI 164 (166)
T ss_dssp HHHHHC----
T ss_pred HHHHHHhccc
Confidence 9999987543
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-23 Score=182.56 Aligned_cols=139 Identities=29% Similarity=0.535 Sum_probs=121.9
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 491 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~ 491 (577)
.++++++++++++|..+|.|++|.|+.+||..+|. .+|..+++.++..++..+|.|++|.|+|+||+.++......
T Consensus 3 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~--- 78 (148)
T 1exr_A 3 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKE--- 78 (148)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHH---
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccC---
Confidence 46788899999999999999999999999999995 58999999999999999999999999999999876542111
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 492 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
......++.+|+.+|+|++|+|+.+||+.++...| ++.++|+.+|.|+||.|+|+||+.+|..
T Consensus 79 --~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 79 --QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp --HHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred --CCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence 11124678899999999999999999999987766 4899999999999999999999999864
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=189.16 Aligned_cols=162 Identities=18% Similarity=0.261 Sum_probs=129.0
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHH-----HHHHhhCCCCccHH-----HHHHHHHhhcCCCCcceehhhH
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMR-----QALAKDLPWKLKES-----RVLEILQAIDCNTDGLVDFSEF 478 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~-----~~l~~~~~~~~~~~-----~~~~~~~~~D~d~dg~i~f~EF 478 (577)
+...++++++++++++|..+|.|++|+|+.+||. .++ +.+|..++.. ++..+|..+|.|++|.|+|+||
T Consensus 10 ~~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l-~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF 88 (195)
T 1qv0_A 10 KTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDIC-AKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQF 88 (195)
T ss_dssp SCCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHH-HHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHH
T ss_pred CcccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHH-HHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHH
Confidence 4445688999999999999999999999999999 566 4588888876 6899999999999999999999
Q ss_pred HHHHhhhhhhc-----ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccH
Q 008127 479 VAATLHVHQLE-----EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISL 547 (577)
Q Consensus 479 ~~~~~~~~~~~-----~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~ 547 (577)
+.++....... ..........+..+|+.||+|++|+|+.+||+.++...| +++.+|+.+|.|+||.|+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~ 168 (195)
T 1qv0_A 89 LDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDV 168 (195)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEH
T ss_pred HHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCH
Confidence 98765432211 111111122344899999999999999999999997666 4899999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCC
Q 008127 548 SEFRRLLRTASISSRNVPPSPSGH 571 (577)
Q Consensus 548 ~EF~~~l~~~~~~~~~~~~~~~~~ 571 (577)
+||+.++.....+.++..||.=|.
T Consensus 169 ~eF~~~~~~~~~s~d~~~~g~~g~ 192 (195)
T 1qv0_A 169 DEMTRQHLGFWYTLDPEADGLYGN 192 (195)
T ss_dssp HHHHHHHHHHHTTCCGGGTTTTTT
T ss_pred HHHHHHHHHHccCCCccCccccCC
Confidence 999999999888888888874443
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=99.88 E-value=7.9e-23 Score=182.59 Aligned_cols=136 Identities=21% Similarity=0.378 Sum_probs=117.6
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++++++++|+++|..||+|++|+|+..||..+| +.+|..+++.++..++. +++|.|+|+||+.++..... .
T Consensus 8 ~~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l-~~lg~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~--~ 80 (153)
T 3i5g_B 8 VKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMF-SSLGRVPPDDELNAMLK----ECPGQLNFTAFLTLFGEKVS--G 80 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHH-HHTTSCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTTTT--T
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHH-HHcCCCccHHHHHHHHH----hccCCccHHHHHHHHHhhhc--c
Confidence 35889999999999999999999999999999999 56999999999888775 46788999999987654322 1
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
... ...++.+|+.||+|++|+|+.+||+.+|...| +++++|+.+|.| ||.|+|+||+++|.+.
T Consensus 81 ~~~---~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~ 149 (153)
T 3i5g_B 81 TDP---EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKA 149 (153)
T ss_dssp CCC---HHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCS
T ss_pred ccc---HHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCC
Confidence 222 23688999999999999999999999999887 499999999988 9999999999999764
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-22 Score=179.32 Aligned_cols=145 Identities=29% Similarity=0.494 Sum_probs=124.7
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~ 488 (577)
|...++++++++++++|..+|.|++|.|+.+||..+|. .+|..+++.++..++..+|.+++|.|+|+||+..+......
T Consensus 1 m~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~ 79 (153)
T 3ox6_A 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMR-TMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLA 79 (153)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHH-HTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTT
T ss_pred CcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhc
Confidence 45678899999999999999999999999999999995 58999999999999999999999999999999877543221
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcC-cC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL-KG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
.. ........++.+|+.+|+|++|+|+.+||+.++.. .+ +++.++..+|.|+||.|+|+||+.+|.
T Consensus 80 ~~-~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 80 ET-ADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp CC-HHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred cc-cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 11 11111346888999999999999999999999877 55 489999999999999999999999875
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.6e-22 Score=184.16 Aligned_cols=157 Identities=18% Similarity=0.191 Sum_probs=132.1
Q ss_pred ccccchHHHhhhccccccc-cCCCCCCCCHHHHHHHHHhhC----CCCccHHHHHHHH-----------HhhcCCCCcce
Q 008127 410 ASTLDDEELADLRDQFDAI-DVDKNGSISLEEMRQALAKDL----PWKLKESRVLEIL-----------QAIDCNTDGLV 473 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~-D~d~dG~i~~~el~~~l~~~~----~~~~~~~~~~~~~-----------~~~D~d~dg~i 473 (577)
...+++++.++++++|..+ |.|+||+|+.+||..++.. + |..++..++..++ ..+|.|++|.|
T Consensus 3 ~~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~-~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i 81 (191)
T 2ccm_A 3 AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKK-ICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQV 81 (191)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHH-HHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCE
T ss_pred hhhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHH-HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeE
Confidence 4567788899999999999 9999999999999999965 5 8888888999888 99999999999
Q ss_pred ehhhHHHHHhhhhhh---cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCccc
Q 008127 474 DFSEFVAATLHVHQL---EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRIS 546 (577)
Q Consensus 474 ~f~EF~~~~~~~~~~---~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~ 546 (577)
+|+||+.++...... ...........++.+|+.+|+|++|+|+.+||+.++...| ++..+|+.+|.|+||.|+
T Consensus 82 ~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~ 161 (191)
T 2ccm_A 82 TKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVT 161 (191)
T ss_dssp EHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHHHHHHHHTTTTTSCCB
T ss_pred CHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCcC
Confidence 999999877543210 0111122234688899999999999999999999997765 589999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCC
Q 008127 547 LSEFRRLLRTASISSRNVPPS 567 (577)
Q Consensus 547 ~~EF~~~l~~~~~~~~~~~~~ 567 (577)
|+||+.++.....+.++..|+
T Consensus 162 ~~Ef~~~~~~~~~s~d~~~~~ 182 (191)
T 2ccm_A 162 REIFARLWTEYFVSNDRGAKG 182 (191)
T ss_dssp HHHHHHHHHHHHHCCCTTCGG
T ss_pred HHHHHHHHHHHhcCCCCCCCc
Confidence 999999999988787777665
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.8e-22 Score=183.90 Aligned_cols=155 Identities=19% Similarity=0.266 Sum_probs=128.9
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHH-----HHHHhhCCCCccHH-----HHHHHHHhhcCCCCcceehhhHHHH
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMR-----QALAKDLPWKLKES-----RVLEILQAIDCNTDGLVDFSEFVAA 481 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~-----~~l~~~~~~~~~~~-----~~~~~~~~~D~d~dg~i~f~EF~~~ 481 (577)
..+++++++++++|..+|.|++|+|+.+||. .++ +.+|..++.. +++.+|+.+|.|++|.|+|+||+..
T Consensus 9 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l-~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~ 87 (191)
T 1uhk_A 9 FDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVI-NNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEG 87 (191)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHH
T ss_pred cCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHH-HHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHH
Confidence 3477889999999999999999999999999 777 5589888887 6899999999999999999999987
Q ss_pred Hhhhhhhc-----ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHH
Q 008127 482 TLHVHQLE-----EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEF 550 (577)
Q Consensus 482 ~~~~~~~~-----~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF 550 (577)
+....... ....+.....++.+|+.+|+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF 167 (191)
T 1uhk_A 88 WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEM 167 (191)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHH
T ss_pred HHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 65432211 111111112234899999999999999999999987665 4899999999999999999999
Q ss_pred HHHHhhcccCCCCCCCC
Q 008127 551 RRLLRTASISSRNVPPS 567 (577)
Q Consensus 551 ~~~l~~~~~~~~~~~~~ 567 (577)
+.+|.....+.++..||
T Consensus 168 ~~~~~~~~~s~d~~~~g 184 (191)
T 1uhk_A 168 TRQHLGFWYTMDPACEK 184 (191)
T ss_dssp HHHHHHHHTTCCGGGTT
T ss_pred HHHHHHHhcCCCCCCcc
Confidence 99999988888887777
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.3e-22 Score=180.38 Aligned_cols=142 Identities=28% Similarity=0.471 Sum_probs=123.5
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++++++.+++++|..+|.|++|.|+.+||..+| +.+|..++..++..+|..+|.|++|.|+|+||+..+......
T Consensus 20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l-~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~-- 96 (169)
T 3qrx_A 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGE-- 96 (169)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHH-HHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHH--
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcc--
Confidence 45788999999999999999999999999999999 558999999999999999999999999999999877543211
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
......+..+|+.+|+|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+.+|+..+
T Consensus 97 ---~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 167 (169)
T 3qrx_A 97 ---RDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167 (169)
T ss_dssp ---HHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC---
T ss_pred ---cCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHhcc
Confidence 11234678899999999999999999999998766 489999999999999999999999997643
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.87 E-value=7.6e-22 Score=177.70 Aligned_cols=146 Identities=26% Similarity=0.467 Sum_probs=124.9
Q ss_pred hccccchHHHhhhccccccccCCC-CCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 487 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~-dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~ 487 (577)
+...++++++++++++|..+|.|+ +|.|+.+||..+|. .+|..+++.++..+|+.+|.|++|.|+|+||+.++.....
T Consensus 8 ~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~ 86 (161)
T 1dtl_A 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMR-MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 86 (161)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC
T ss_pred HHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhc
Confidence 456788899999999999999999 99999999999995 5899999999999999999999999999999987765322
Q ss_pred hcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 488 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 488 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
... .......++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 87 ~~~--~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 160 (161)
T 1dtl_A 87 DDS--KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160 (161)
T ss_dssp -------CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred ccc--cchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcC
Confidence 000 111234688899999999999999999999998776 48999999999999999999999999753
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-22 Score=176.34 Aligned_cols=140 Identities=29% Similarity=0.503 Sum_probs=121.7
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~ 488 (577)
|...++++++.+++++|..+|.|++|.|+.+||..++. .+|..++..++..++..+|.+++|.|+|+||+..+......
T Consensus 1 m~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~ 79 (147)
T 4ds7_A 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMR-SLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKC 79 (147)
T ss_dssp ---CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHT
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH-HhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccC
Confidence 45678899999999999999999999999999999995 58999999999999999999999999999999877543211
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
. .....+..+|+.+|+|++|+|+.+||+.++...+ ++..++..+| |+||.|+|+||+.+|.
T Consensus 80 ~-----~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 80 N-----DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp H-----HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred C-----CcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 1 1124678899999999999999999999998766 4889999999 9999999999999885
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.86 E-value=7e-22 Score=177.89 Aligned_cols=141 Identities=24% Similarity=0.412 Sum_probs=124.6
Q ss_pred ccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
...++++++++++++|..+|.|++|+|+.+||..+|. .+|..++..++..++..+|.+++|.|+|+||+..+.......
T Consensus 14 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~ 92 (161)
T 3fwb_A 14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMK-ALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKR 92 (161)
T ss_dssp TTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcC
Confidence 4567889999999999999999999999999999995 589999999999999999999999999999998776432211
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.. ...++.+|+.+|+|++|+|+.+||+.++...+ ++..+|+.+|.|+||.|+|+||+.+|..
T Consensus 93 --~~---~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 93 --DP---LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp --CH---HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred --Cc---HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 11 24678899999999999999999999998766 5899999999999999999999999874
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=178.48 Aligned_cols=151 Identities=17% Similarity=0.209 Sum_probs=124.7
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHH----HHHhhCCCCccHHHHH-----------HHHHhhcCCCCcceehhhH
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQ----ALAKDLPWKLKESRVL-----------EILQAIDCNTDGLVDFSEF 478 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~----~l~~~~~~~~~~~~~~-----------~~~~~~D~d~dg~i~f~EF 478 (577)
+++++++++++|..+|.|++|+|+.+||.. ++ +.+|..++..++. .+|..+|.|++|.|+|+||
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l-~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef 80 (176)
T 1nya_A 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIA-EAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQF 80 (176)
T ss_dssp CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHH-HHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHH-HHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHH
Confidence 567889999999999999999999999999 55 5689999888887 8999999999999999999
Q ss_pred HHHHhhhhhhccc--ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHH
Q 008127 479 VAATLHVHQLEEH--DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRR 552 (577)
Q Consensus 479 ~~~~~~~~~~~~~--~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~ 552 (577)
+.++......... ........++.+|+.+|+|++|+|+.+||+.++...| ++..+|+.+|.|+||.|+|+||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~ 160 (176)
T 1nya_A 81 IRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLT 160 (176)
T ss_dssp HHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred HHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence 9877653322111 0111124688899999999999999999999887655 589999999999999999999999
Q ss_pred HHhhcccCCCCCCC
Q 008127 553 LLRTASISSRNVPP 566 (577)
Q Consensus 553 ~l~~~~~~~~~~~~ 566 (577)
+|..... ..+.+|
T Consensus 161 ~~~~~~~-~~~~~p 173 (176)
T 1nya_A 161 AVRDFHF-GRLDVE 173 (176)
T ss_dssp HHSCCSS-SCSSCC
T ss_pred HHHHHhc-CCCCCc
Confidence 9988665 444444
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.2e-22 Score=180.97 Aligned_cols=142 Identities=27% Similarity=0.534 Sum_probs=121.1
Q ss_pred ccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
...++++++.+++++|..+|.|++|.|+.+||..+|. .+|..+++.++..+|..+|.|++|.|+|+||+..+......
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~- 79 (179)
T 2f2o_A 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD- 79 (179)
T ss_dssp ----CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHH-
T ss_pred cccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccC-
Confidence 4567888999999999999999999999999999995 58999999999999999999999999999999876543211
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
......++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 80 ----~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 149 (179)
T 2f2o_A 80 ----TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149 (179)
T ss_dssp ----HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-
T ss_pred ----cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc
Confidence 11124678899999999999999999999997766 48999999999999999999999999764
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.3e-22 Score=176.93 Aligned_cols=144 Identities=20% Similarity=0.366 Sum_probs=122.9
Q ss_pred cccchHHHhhhcccccccc-CCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 411 STLDDEELADLRDQFDAID-VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D-~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
..++++++.+++++|..+| .|++|+|+.+||..+|. .+|..++..++..+|+.+|.|++|.|+|+||+.++.......
T Consensus 5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~ 83 (158)
T 2jnf_A 5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILE-VLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEE 83 (158)
T ss_dssp TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHH-HTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCC
T ss_pred hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccc
Confidence 4578889999999999999 99999999999999995 589999999999999999999999999999998776432211
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.. .......++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|.+
T Consensus 84 ~~-~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 155 (158)
T 2jnf_A 84 VN-PEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155 (158)
T ss_dssp CC-TTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSS
T ss_pred cc-hhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 00 000112577899999999999999999999997665 4899999999999999999999999865
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.8e-22 Score=176.40 Aligned_cols=136 Identities=18% Similarity=0.258 Sum_probs=115.0
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhh-cCCCCcceehhhHHHHHhhhhhh---cccc
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-DCNTDGLVDFSEFVAATLHVHQL---EEHD 492 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~-D~d~dg~i~f~EF~~~~~~~~~~---~~~~ 492 (577)
++++++++|..+|.|++|+|+.+||..+|. .+|..+++.++..++..+ |.|++|.|+|+||+..+...... ....
T Consensus 2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 80 (148)
T 1m45_A 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLR-AIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKA 80 (148)
T ss_dssp -CCCCTTCHHHHCTTCCSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-HhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccc
Confidence 467899999999999999999999999995 589999999999999999 99999999999999887654211 1111
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
. ...++.+|+.+|+|++|+|+.+||+.++...| ++..+|+.+|.|+||.|+|+||+.+|..
T Consensus 81 ~---~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 81 K---TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp C---THHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred c---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 1 23678899999999999999999999998766 4899999999999999999999999864
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.6e-22 Score=174.64 Aligned_cols=134 Identities=19% Similarity=0.372 Sum_probs=117.7
Q ss_pred hHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccH
Q 008127 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 494 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~ 494 (577)
++++++++++|..+|.|++|.|+.+||..+|. .+|..+++.++..+|+.+|.|++|.|+|+||+.++...... ...
T Consensus 2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~--~~~- 77 (142)
T 2bl0_C 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLK-QFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQ--TTS- 77 (142)
T ss_dssp CHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHH-HHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTT--CCC-
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcC--CCh-
Confidence 56788999999999999999999999999995 48999999999999999999999999999999877642211 111
Q ss_pred HHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 495 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 495 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
...++.+|+.+|+|++|+|+.+||+.++...+ +++.+|..+| |+||.|+|+||+.+|.
T Consensus 78 --~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 78 --EDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp --HHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred --HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 23688899999999999999999999998766 4899999999 9999999999998764
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-21 Score=179.23 Aligned_cols=153 Identities=16% Similarity=0.216 Sum_probs=127.2
Q ss_pred cchHHHhhhccccccc-cCCCCCCCCHHHHHHHHHhhCC----CCccHHHHHHH-----------HHhhcCCCCcceehh
Q 008127 413 LDDEELADLRDQFDAI-DVDKNGSISLEEMRQALAKDLP----WKLKESRVLEI-----------LQAIDCNTDGLVDFS 476 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~-D~d~dG~i~~~el~~~l~~~~~----~~~~~~~~~~~-----------~~~~D~d~dg~i~f~ 476 (577)
+++++.++++++|..+ |.|+||.|+.+||..++.. ++ ..++..++..+ |..+|.|++|.|+|+
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~ 80 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTR-YKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWE 80 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHH-HHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHH
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHH-HHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHH
Confidence 4677889999999999 9999999999999999854 56 77888888765 999999999999999
Q ss_pred hHHHHHhhhhhh---cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHH
Q 008127 477 EFVAATLHVHQL---EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSE 549 (577)
Q Consensus 477 EF~~~~~~~~~~---~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~E 549 (577)
||+.++...... ...........++.+|+.+|+|++|+|+.+||+.++...+ ++..+|+.+|.|+||.|+|+|
T Consensus 81 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~e 160 (185)
T 2sas_A 81 EYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNR 160 (185)
T ss_dssp HHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHH
T ss_pred HHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHhcCCCCCcCcHHH
Confidence 999877653221 1111111234688899999999999999999999997764 699999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCC
Q 008127 550 FRRLLRTASISSRNVPPS 567 (577)
Q Consensus 550 F~~~l~~~~~~~~~~~~~ 567 (577)
|+.++.....+.+ ..|+
T Consensus 161 f~~~~~~~~~s~~-~~~~ 177 (185)
T 2sas_A 161 YKELYYRLLTSPA-ADAG 177 (185)
T ss_dssp HHHHHHHHHHCSS-CSGG
T ss_pred HHHHHHHHhcCCC-CCCc
Confidence 9999999877777 5554
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.85 E-value=7e-22 Score=186.27 Aligned_cols=155 Identities=19% Similarity=0.243 Sum_probs=117.4
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCC--CccHHHHHHHH-------HhhcCCCCcceehhhHHHH
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEIL-------QAIDCNTDGLVDFSEFVAA 481 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~--~~~~~~~~~~~-------~~~D~d~dg~i~f~EF~~~ 481 (577)
..++++++.+++++|..+|.|++|+|+.+||..+|.. +|. .+++.++..++ +.+|.|++|.|+|+||+.+
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~ 106 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDR-MRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEA 106 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEECHHHHTHHHHH-HHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHH
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-HHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence 5677888999999999999999999999999999954 676 78899999999 9999999999999999987
Q ss_pred Hhh----hh--hhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHH
Q 008127 482 TLH----VH--QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFR 551 (577)
Q Consensus 482 ~~~----~~--~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~ 551 (577)
+.. .. .+.... ......++.+|+.+|+|++|+|+.+||+.++...| +++.+|..+|.|+||.|+|+||+
T Consensus 107 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~I~~~EF~ 185 (208)
T 2hpk_A 107 NRVFAEAERERERRGEP-SLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELV 185 (208)
T ss_dssp HHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHHHHHHHCTTCCSSBCHHHHH
T ss_pred HHHHhhhhhhhhccCCh-HHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 751 00 111111 11112378899999999999999999999986554 58999999999999999999999
Q ss_pred HHHhhcccCC-CCCCCC
Q 008127 552 RLLRTASISS-RNVPPS 567 (577)
Q Consensus 552 ~~l~~~~~~~-~~~~~~ 567 (577)
.+|.....+. ++..|+
T Consensus 186 ~~~~~~~~~~~d~~~~g 202 (208)
T 2hpk_A 186 HLFRKFWMEPYDPQWDG 202 (208)
T ss_dssp HHHHHHHC---------
T ss_pred HHHHHHhcCCCCCCCcc
Confidence 9999877666 666665
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-21 Score=175.02 Aligned_cols=146 Identities=27% Similarity=0.469 Sum_probs=126.1
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~ 488 (577)
+...++++++.+++++|..+|.|++|.|+..||..++. .+|..++..++..+|+.+|.|++|.|+|+||+..+......
T Consensus 10 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 88 (162)
T 1top_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR-MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE 88 (162)
T ss_dssp HHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhcc
Confidence 44578899999999999999999999999999999995 58999999999999999999999999999999877543211
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
. ........++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 89 ~--~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 89 D--AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp H--HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred c--cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 1 1011234688899999999999999999999998776 48999999999999999999999999754
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.85 E-value=6.9e-22 Score=183.19 Aligned_cols=139 Identities=35% Similarity=0.649 Sum_probs=122.1
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++++++++++++|..+|.|++|.|+.+||..+| +.+|..+++.++..+|..+|.|++|.|+|+||+.++........
T Consensus 2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l-~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~ 80 (188)
T 1s6i_A 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER 80 (188)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHH-TTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH-HHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCH
Confidence 35678889999999999999999999999999999 45899999999999999999999999999999987754322111
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
. ..++.+|+.+|+|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+.+|..
T Consensus 81 ~------~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 144 (188)
T 1s6i_A 81 E------ENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144 (188)
T ss_dssp C------CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSC
T ss_pred H------HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 1 2467799999999999999999999998765 5899999999999999999999999975
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-21 Score=189.50 Aligned_cols=145 Identities=16% Similarity=0.149 Sum_probs=106.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCE--EEEEEecccccC---------------------chhhHHHHHHHHHHHHHh
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMI---------------------LPIAVEDVKREVKILQAL 153 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~--vaiK~i~~~~~~---------------------~~~~~~~~~~E~~~l~~l 153 (577)
-|.+.+.||+|+||.||+|.+..+|+. ||||++...... .......+.+|+.+|.+|
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 378999999999999999998778999 999987543210 001224678999999999
Q ss_pred cCCCCe--eEEEEEEEcCCeEEEEEeccCC-CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q 008127 154 AGHENV--VKFYNAFEDDNYVYIAMELCEG-GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 230 (577)
Q Consensus 154 ~~hpni--v~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~L 230 (577)
. |+++ +.+++. +..+|||||+.+ |.+...+.... ...++..+..++.||+.||.||
T Consensus 128 ~-~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~----------------~~~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 128 K-EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELG----------------RELKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp H-HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHG----------------GGGGGSCHHHHHHHHHHHHHHH
T ss_pred H-hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHh----------------hccChHHHHHHHHHHHHHHHHH
Confidence 5 7653 444432 246899999942 42222221110 0112456788999999999999
Q ss_pred H-hcCceeccCCCCcEEeecCCCCCCeeEEecCCCccc
Q 008127 231 H-LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267 (577)
Q Consensus 231 H-~~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~ 267 (577)
| +.|||||||||+|||++ . .++|+|||+|...
T Consensus 187 H~~~givHrDlkp~NILl~----~-~~~liDFG~a~~~ 219 (258)
T 1zth_A 187 YQEAELVHADLSEYNIMYI----D-KVYFIDMGQAVTL 219 (258)
T ss_dssp HHTSCEECSSCSTTSEEES----S-SEEECCCTTCEET
T ss_pred HHHCCEEeCCCCHHHEEEc----C-cEEEEECcccccC
Confidence 9 99999999999999997 3 8999999999754
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-21 Score=183.08 Aligned_cols=145 Identities=17% Similarity=0.177 Sum_probs=125.2
Q ss_pred hhhhHHHHHhhccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhH
Q 008127 399 SRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEF 478 (577)
Q Consensus 399 s~l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF 478 (577)
..++......+...++++++++++++|..+|.|++|.|+.+||..+| +.+|..+++.+++.+++.+|.|++|.|+|+||
T Consensus 31 ~~~~~~~~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l-~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF 109 (220)
T 3sjs_A 31 PSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQ-FPGGIRLSPQTALRMMRIFDTDFNGHISFYEF 109 (220)
T ss_dssp HHHHTSTTGGGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCC-BGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHH
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHH
Confidence 33444444456677899999999999999999999999999999999 45799999999999999999999999999999
Q ss_pred HHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHH
Q 008127 479 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRR 552 (577)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~ 552 (577)
+.++... ..++.+|+.+|+|++|+|+.+||+.++...| +++.+++.+| |+||.|+|+||+.
T Consensus 110 ~~~~~~~------------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~ 176 (220)
T 3sjs_A 110 MAMYKFM------------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIA 176 (220)
T ss_dssp HHHHHHH------------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHH
T ss_pred HHHHHHH------------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHH
Confidence 9876532 2577899999999999999999999998766 4899999999 9999999999999
Q ss_pred HHhhc
Q 008127 553 LLRTA 557 (577)
Q Consensus 553 ~l~~~ 557 (577)
+|...
T Consensus 177 ~~~~l 181 (220)
T 3sjs_A 177 ICAFA 181 (220)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88653
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-21 Score=169.60 Aligned_cols=138 Identities=17% Similarity=0.277 Sum_probs=120.4
Q ss_pred cchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhh---cCCCCcceehhhHHHHHhhhhhhc
Q 008127 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI---DCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~---D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
++++++.+++++|..+|.|++|+|+..||..+|. .+|..++..++..++..+ |.++ |.|+|+||+..+.......
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~-~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~ 79 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIAR-ALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNK 79 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccC
Confidence 5778899999999999999999999999999995 589999999999999999 9999 9999999998776532122
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
... ....++.+|+.+|+|++|+|+.+||+.++...| ++..+|.. |.|+||.|+|+||+.+|..
T Consensus 80 ~~~---~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 80 DQG---TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred Ccc---hHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 111 234688899999999999999999999998766 48999999 9999999999999999864
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-21 Score=174.69 Aligned_cols=140 Identities=21% Similarity=0.382 Sum_probs=122.4
Q ss_pred ccchHHHhhhccccccccC--CCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 412 TLDDEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~--d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
.++++++.+++++|..+|. |++|+|+.+||..+|. .+|..++..++..+ ..+|.|++|.|+|+||+.++......
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~- 78 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCR-CLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDC- 78 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHH-HTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTS-
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHH-HcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhc-
Confidence 4678899999999999999 9999999999999995 58999999999999 99999999999999999877654321
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHH--hCCCCCCcccHHHHHHHHhhc
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEE--ADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~--~D~d~dG~i~~~EF~~~l~~~ 557 (577)
.... ...++.+|+.+|+|++|+|+.+||+.++...| ++..+|+. +|.|+||.|+|+||+.+|...
T Consensus 79 ~~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_C 79 EQGT---FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151 (156)
T ss_dssp CCCC---HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred cCCh---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence 0111 24688899999999999999999999998766 48999999 999999999999999999864
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-21 Score=171.48 Aligned_cols=134 Identities=25% Similarity=0.458 Sum_probs=117.3
Q ss_pred cchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccc
Q 008127 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 492 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~ 492 (577)
++++++++++++|..+|.|++|+|+.+||..+|. .+|..++..++..++.. ++|.|+|+||+.++...... ..
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~--~~ 73 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLA-SMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNG--TD 73 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHH-HTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTS--SC
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHH-HhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhcc--CC
Confidence 4678899999999999999999999999999994 58999999999988876 89999999999877643221 11
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
. ...++.+|+.+|+|++|+|+.+||+.++...| +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 74 ~---~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 74 P---EDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH 140 (143)
T ss_dssp C---HHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred c---HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 1 23688899999999999999999999998776 4899999999999999999999999975
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.84 E-value=3.5e-21 Score=175.74 Aligned_cols=149 Identities=18% Similarity=0.261 Sum_probs=122.2
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCC----CCccHHH-H--------HHHHHhhcCCCCcceehhhHHH
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESR-V--------LEILQAIDCNTDGLVDFSEFVA 480 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~----~~~~~~~-~--------~~~~~~~D~d~dg~i~f~EF~~ 480 (577)
+++++++++++|..+|.|++|+|+.+||..+|.. ++ ..++..+ + +.+|+.+| ++|.|+|+||+.
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~ 77 (174)
T 1q80_A 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAER-FAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFIN 77 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHH-HHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHH-HHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHH
Confidence 3577889999999999999999999999999954 55 7888777 6 46788899 999999999998
Q ss_pred HHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 481 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
++..... ...........++.+|+.+|+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 156 (174)
T 1q80_A 78 SMKEMVK-NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD 156 (174)
T ss_dssp HHHHHTT-STTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHcC-cccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCceEeHHHHHHHHHH
Confidence 7765432 1111111234688899999999999999999999886554 6999999999999999999999999998
Q ss_pred cccCCCCCCCC
Q 008127 557 ASISSRNVPPS 567 (577)
Q Consensus 557 ~~~~~~~~~~~ 567 (577)
.. +.++..|+
T Consensus 157 ~~-~~~~~~~g 166 (174)
T 1q80_A 157 FF-MNDGDSTN 166 (174)
T ss_dssp HH-HCCCCSST
T ss_pred Hh-ccCcccCC
Confidence 77 66666655
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-21 Score=184.98 Aligned_cols=148 Identities=18% Similarity=0.242 Sum_probs=124.5
Q ss_pred HHhhccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhh---------cCCCCcceehh
Q 008127 406 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI---------DCNTDGLVDFS 476 (577)
Q Consensus 406 l~~~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~---------D~d~dg~i~f~ 476 (577)
...+...++++++.+++++|..+|.|++|+|+.+||..++.+.+|..++..++..++..+ |.|++|.|+|+
T Consensus 38 ~~~l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~ 117 (226)
T 2lvv_A 38 RCAIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLV 117 (226)
T ss_dssp HHHSCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCB
T ss_pred HHHhchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHH
Confidence 334566788999999999999999999999999999996667788888877777777777 99999999999
Q ss_pred hHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc---C----cHHHHHHHhCCCCCCcccHHH
Q 008127 477 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---G----SIDPLLEEADIDKDGRISLSE 549 (577)
Q Consensus 477 EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~---~----~~~~~~~~~D~d~dG~i~~~E 549 (577)
||+.++........ ...++.+|+.||+|++|+|+.+||+.++... + ++..+|..+|.|+||.|+|+|
T Consensus 118 EF~~~~~~~~~~~~------~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~E 191 (226)
T 2lvv_A 118 EFLEFRLMLCYIYD------IFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDE 191 (226)
T ss_dssp CHHHHHHHHHHHHH------HHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHHH
T ss_pred HHHHHHHHHHhccC------HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence 99986443322211 2368889999999999999999999998654 3 599999999999999999999
Q ss_pred HHHHHhhccc
Q 008127 550 FRRLLRTASI 559 (577)
Q Consensus 550 F~~~l~~~~~ 559 (577)
|+.+|.....
T Consensus 192 F~~~~~~~~~ 201 (226)
T 2lvv_A 192 FSCWAVTKKL 201 (226)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhcCC
Confidence 9999987543
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.84 E-value=3.4e-22 Score=178.07 Aligned_cols=140 Identities=19% Similarity=0.327 Sum_probs=112.9
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC--CCcceehhhHHHHHhhhhhhc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d--~dg~i~f~EF~~~~~~~~~~~ 489 (577)
.++++++++++++|..+|.|++|+|+.+||..+|. .+|..++..++..++..+|.| ++|.|+|+||+.++.......
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~ 81 (151)
T 1w7j_B 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMR-ALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNR 81 (151)
T ss_dssp --------CHHHHHHHHCCSSSSEEESTTHHHHHH-HTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccC
Confidence 46778899999999999999999999999999995 589999999999999999999 999999999998776532211
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.. .....++.+|+.+|+|++|+|+.+||+.++...| ++..+|+.+| |+||.|+|+||+.+|.+
T Consensus 82 ~~---~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~~ 150 (151)
T 1w7j_B 82 GQ---GTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHILS 150 (151)
T ss_dssp ---------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred CC---CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence 11 1123567799999999999999999999998766 4899999999 99999999999998853
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-20 Score=170.17 Aligned_cols=137 Identities=20% Similarity=0.325 Sum_probs=118.5
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
..++++++.+++.+|..+|.|++|.|+.+||..+|. .+|. .++..++..++... +|.|+|+||+.++......
T Consensus 17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~- 90 (166)
T 2mys_B 17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFA-AMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKG- 90 (166)
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhcc-
Confidence 467888999999999999999999999999999995 5898 99999999999864 7999999999877543211
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
... ...++.+|+.||+|++|+|+.+||+.++...| +++.+|..+|.|+||.|+|+||+.+|...
T Consensus 91 -~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 91 -ADP---EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred -CCc---HHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence 111 24678899999999999999999999998766 48999999999999999999999999863
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-21 Score=181.68 Aligned_cols=151 Identities=25% Similarity=0.366 Sum_probs=122.3
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc--
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE-- 489 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~-- 489 (577)
.++++++++++++|..+|.|++|+|+.+||..+ ..+|..++ +..+|..+|.|++|.|+|+||+.++.......
T Consensus 22 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~--~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~ 96 (202)
T 2bec_A 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI--GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDE 96 (202)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC--HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH--HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchh
Confidence 578889999999999999999999999999998 34666554 89999999999999999999998776543200
Q ss_pred ---------ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc-C------cHHHHHHH----hCCCCCCcccHHH
Q 008127 490 ---------EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-G------SIDPLLEE----ADIDKDGRISLSE 549 (577)
Q Consensus 490 ---------~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~------~~~~~~~~----~D~d~dG~i~~~E 549 (577)
..........++.+|+.||+|++|+|+.+||+.++... | +++.++.. +|.|+||.|+|+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~E 176 (202)
T 2bec_A 97 DTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVE 176 (202)
T ss_dssp HHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHH
T ss_pred cccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHH
Confidence 00011123578899999999999999999999999776 5 36667777 9999999999999
Q ss_pred HHHHHhhcccCCCCCCCC
Q 008127 550 FRRLLRTASISSRNVPPS 567 (577)
Q Consensus 550 F~~~l~~~~~~~~~~~~~ 567 (577)
|+.+|....+......|.
T Consensus 177 F~~~~~~~~~~~~~~~~~ 194 (202)
T 2bec_A 177 FTKSLEKMDVEQKMSIRI 194 (202)
T ss_dssp HHHTTTTSCHHHHTSCTT
T ss_pred HHHHHHHhCccceEEEee
Confidence 999999877765554443
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.4e-21 Score=180.80 Aligned_cols=148 Identities=18% Similarity=0.251 Sum_probs=121.8
Q ss_pred HHHhhccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhh---------cCCCCcceeh
Q 008127 405 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI---------DCNTDGLVDF 475 (577)
Q Consensus 405 ~l~~~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~---------D~d~dg~i~f 475 (577)
+...+...++++++.+++++|..+|.|++|+|+.+||..+|...+|..++..++..++..+ |.|++|.|+|
T Consensus 34 l~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~ 113 (219)
T 3cs1_A 34 IRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDF 113 (219)
T ss_dssp HHHHSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSS
T ss_pred HHHHhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCH
Confidence 3445667789999999999999999999999999999999965578887777776665533 4489999999
Q ss_pred hhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-------cHHHHHHHhCCCCCCcccHH
Q 008127 476 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLS 548 (577)
Q Consensus 476 ~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~ 548 (577)
+||+..+....... ....++.+|+.||+|++|+|+.+||+.++...| +++.+|..+|.|+||.|+|+
T Consensus 114 ~EF~~~~~~~~~~~------~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~ 187 (219)
T 3cs1_A 114 VEFLEFRLMLCYIY------DFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFD 187 (219)
T ss_dssp BCHHHHHHHHHHHH------HHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHH
T ss_pred HHHHHHHHHHhccc------hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence 99998764332221 124688899999999999999999999885433 58999999999999999999
Q ss_pred HHHHHHhhcc
Q 008127 549 EFRRLLRTAS 558 (577)
Q Consensus 549 EF~~~l~~~~ 558 (577)
||+.+|....
T Consensus 188 EF~~~~~~~~ 197 (219)
T 3cs1_A 188 EFAAWASAVK 197 (219)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9999998754
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4e-20 Score=167.13 Aligned_cols=143 Identities=19% Similarity=0.177 Sum_probs=115.8
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHH---hhCCCCccHHHHHHH-----------HHhhcCCCCcceehhhHHHHH
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALA---KDLPWKLKESRVLEI-----------LQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~---~~~~~~~~~~~~~~~-----------~~~~D~d~dg~i~f~EF~~~~ 482 (577)
++++++++|..+|.|++|+|+.+||..++. +.+|..++..++..+ |..+|.|++|.|+|+||+.++
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~ 81 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA 81 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 357899999999999999999999999853 346888888777755 799999999999999999876
Q ss_pred hhhhhhcccc-cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 483 LHVHQLEEHD-SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 483 ~~~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
.......... .......++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~ 161 (166)
T 3akb_A 82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVPAFARY 161 (166)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 5432211100 011123588899999999999999999999887655 58999999999999999999999999875
Q ss_pred cc
Q 008127 558 SI 559 (577)
Q Consensus 558 ~~ 559 (577)
..
T Consensus 162 ~~ 163 (166)
T 3akb_A 162 FT 163 (166)
T ss_dssp TS
T ss_pred hc
Confidence 44
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5e-20 Score=159.92 Aligned_cols=130 Identities=25% Similarity=0.365 Sum_probs=112.5
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHH
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 500 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~ 500 (577)
++++|..+|.|++|+|+.+||..++. .++..++..++..+|+.+|.|++|.|+|+||+.++...... ........+
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~---~~~~~~~~~ 77 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVS-KKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQ---DLSDDKIGL 77 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHH-TTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCC---SSHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH-HcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhccc---ccCCCHHHH
Confidence 67889999999999999999999995 58889999999999999999999999999999876421111 111112358
Q ss_pred HHHHhhcCCCCCCcccHHHHhhhhcCcCc--HHHHHHHhCCCCCCcccHHHHHHHH
Q 008127 501 QAAFEKFDIDRDGFITPEELRMHTGLKGS--IDPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 501 ~~~F~~~D~d~~G~I~~~El~~~l~~~~~--~~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
+.+|+.+|+|++|+|+.+||+.++...+. +..+|..+|.|+||.|+|+||+.+|
T Consensus 78 ~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 78 KVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHHHHCCSSSSEEEHHHHHHHHTTTTCHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHHHHCCCCCCccCHHHHHHHHHHhCHHHHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 88999999999999999999999998887 8999999999999999999999886
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.1e-20 Score=171.75 Aligned_cols=139 Identities=29% Similarity=0.410 Sum_probs=115.0
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccccc
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 493 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~ 493 (577)
...++.+++++|..+|.|++|+|+.+||..+|. .+|..+++.++..+|..+|.|++|.|+|+||+..+.... .
T Consensus 32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~------~ 104 (204)
T 3e3r_A 32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLA-KLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPM------S 104 (204)
T ss_dssp --------CHHHHHHCTTCCSSBCHHHHHHHHH-TTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCC------C
T ss_pred CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHH-HcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhc------C
Confidence 346778999999999999999999999999994 589999999999999999999999999999998764321 1
Q ss_pred HHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc-------C------cHHHHHHHhCC-CCCCcccHHHHHHHHhhccc
Q 008127 494 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-------G------SIDPLLEEADI-DKDGRISLSEFRRLLRTASI 559 (577)
Q Consensus 494 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-------~------~~~~~~~~~D~-d~dG~i~~~EF~~~l~~~~~ 559 (577)
......++.+|+.+|+|++|+|+.+||+.++... + +++.+|+.+|. |+||.|+|+||+.+|...+.
T Consensus 105 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~ 184 (204)
T 3e3r_A 105 QAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSA 184 (204)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcCc
Confidence 1223468899999999999999999999999853 2 38889999999 99999999999999988663
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.1e-20 Score=165.87 Aligned_cols=138 Identities=31% Similarity=0.543 Sum_probs=113.5
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccccc
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 493 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~ 493 (577)
+++++++++++|..+|.|++|+|+.+|| .++ ..++..+ ++..+|+.+|.|++|.|+|+||+.++...... ..
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l-~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~--~~- 72 (155)
T 3ll8_B 1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-MSL-PELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVK--GD- 72 (155)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSSBCHHHH-TTS-GGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSS--CC-
T ss_pred CHHHHHHHHHHHHHhCcCCCCeEcHHHH-HHh-hccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHccc--CC-
Confidence 3578899999999999999999999999 555 3355443 78999999999999999999999877543211 11
Q ss_pred HHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcC-cC------cHHHHHHH----hCCCCCCcccHHHHHHHHhhcccCC
Q 008127 494 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL-KG------SIDPLLEE----ADIDKDGRISLSEFRRLLRTASISS 561 (577)
Q Consensus 494 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-~~------~~~~~~~~----~D~d~dG~i~~~EF~~~l~~~~~~~ 561 (577)
....++.+|+.+|+|++|+|+.+||+.++.. .+ ++..+++. +|.|+||.|+|+||+.+|....+..
T Consensus 73 --~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~ 149 (155)
T 3ll8_B 73 --KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 149 (155)
T ss_dssp --HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGCGGG
T ss_pred --HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccCchh
Confidence 1246888999999999999999999998876 34 36777777 9999999999999999999876644
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-20 Score=165.58 Aligned_cols=137 Identities=19% Similarity=0.368 Sum_probs=116.2
Q ss_pred ccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
...++++++.+++++|..+|.|++|.|+.+||..+|. .+|..++..++..++. +++|.|+|+||+.++.....
T Consensus 9 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~-- 81 (156)
T 1wdc_B 9 LTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISE-QLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLS-- 81 (156)
T ss_dssp ---CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHH-HHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTC--
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhc--
Confidence 3567888999999999999999999999999999995 4799999999999986 47999999999987764321
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
.... ...++.+|+.||+|++|+|+.+||+.++...| +++.+|+.+|.| ||.|+|+||+.+|...
T Consensus 82 ~~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 82 GTDS---EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp SCCC---HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred CCCh---HHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcC
Confidence 1111 23688899999999999999999999998766 489999999999 9999999999999763
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-20 Score=174.21 Aligned_cols=136 Identities=24% Similarity=0.337 Sum_probs=118.5
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++++++.+|+++|..+|.|++|+|+..||..+|. .+|..++..++..++..+ +|.|+|+||+.++......
T Consensus 49 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~-- 121 (196)
T 3dtp_E 49 AMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFD-SLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAG-- 121 (196)
T ss_dssp CSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHH-TTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCS--
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcC--
Confidence 457888999999999999999999999999999994 589999999999999887 8999999999877542211
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
... ...+..+|+.||+|++|+|+.+||+.++ ..| ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 122 ~~~---~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 190 (196)
T 3dtp_E 122 TDE---EDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKG 190 (196)
T ss_dssp SCC---HHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSSC
T ss_pred CCc---HHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcC
Confidence 111 2367889999999999999999999999 777 48999999999999999999999999753
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5.9e-21 Score=191.76 Aligned_cols=195 Identities=22% Similarity=0.307 Sum_probs=144.3
Q ss_pred CCHHHHHHHHHcc---ccCcCCCCCHHHHhcC------ccccccCCCC-----------------------CCcccHHHH
Q 008127 342 ISNSAKDFVKKLL---VKDPRARLTAAQALSH------PWVREGGDAS-----------------------EIPIDISVL 389 (577)
Q Consensus 342 ~s~~~~~li~~~l---~~dP~~Rpt~~~il~h------p~f~~~~~~~-----------------------~~~~~~~~~ 389 (577)
++.++.+|.++++ ..+|..|.+.++.+.| +|++.+.... +.+....++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~g~~~~e~q~~~~vl 96 (323)
T 1ij5_A 17 VHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLL 96 (323)
T ss_dssp HHHHHHHHHHHHTTCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhhhHHHHHHHHhhcCCCCCcchhhHHHH
Confidence 4567888999888 7899999999999999 9988763211 011111234
Q ss_pred HhhH-HhhhhhhhhHHHHHhhccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC
Q 008127 390 NNMR-QFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468 (577)
Q Consensus 390 ~~lk-~~~~~s~l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d 468 (577)
.+|+ +|...+.++. +...++++++..++.+|..+|.|++|+|+..||..+|. .+|..+++.++..+|..+|.|
T Consensus 97 ~~l~~~f~~~~~lkk-----~~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~-~lg~~~~~~~i~~l~~~~D~d 170 (323)
T 1ij5_A 97 KDLEDDASGYNRLRP-----SKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLA-KYADTIPEGPLKKLFVMVEND 170 (323)
T ss_dssp HHC------------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHH-HHHTTSCSSHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhHHH-----HHHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhcCC
Confidence 4444 4444444443 45678999999999999999999999999999999995 488889999999999999999
Q ss_pred CCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHH-HHHHhCCCC
Q 008127 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDP-LLEEADIDK 541 (577)
Q Consensus 469 ~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~-~~~~~D~d~ 541 (577)
++|.|+|.+|+.++. ....+..+|+.||+|++|+|+.+||..++ .| ++.. +|..+|.|+
T Consensus 171 ~~G~I~f~ef~~l~~------------~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~ 236 (323)
T 1ij5_A 171 TKGRMSYITLVAVAN------------DLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDE 236 (323)
T ss_dssp CSSTHHHHHHTTSHH------------HHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTC
T ss_pred CCCcCcHHHHHhhhh------------HHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCC
Confidence 999999999975321 12245568999999999999999999887 33 4788 999999999
Q ss_pred CCcccHHHHHHHHhh
Q 008127 542 DGRISLSEFRRLLRT 556 (577)
Q Consensus 542 dG~i~~~EF~~~l~~ 556 (577)
||.|+|+||+.+|..
T Consensus 237 dG~Is~~EF~~~l~~ 251 (323)
T 1ij5_A 237 SDDVGFSEYVHLGLC 251 (323)
T ss_dssp SSCEEHHHHHHHHHH
T ss_pred CCEEeHHHHHHHHHH
Confidence 999999999988754
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.81 E-value=9.9e-20 Score=169.08 Aligned_cols=126 Identities=25% Similarity=0.384 Sum_probs=114.2
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHH
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 497 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~ 497 (577)
.++++++|..+|.|++|.|+.+||..+| ..+|..+++.++..+|+.+|.|++|.|+|+||+..+...
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l-~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------------ 92 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAISVPELNAAL-SSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------------ 92 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHH-CBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH------------
Confidence 4689999999999999999999999999 557888999999999999999999999999999866421
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.+|+|++|+|+.+||+.++...| ++..+|+.+|.|+||.|+|+||+.++..
T Consensus 93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 157 (191)
T 1y1x_A 93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF 157 (191)
T ss_dssp HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 2577899999999999999999999998776 4899999999999999999999999864
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.81 E-value=4.4e-20 Score=162.04 Aligned_cols=131 Identities=21% Similarity=0.283 Sum_probs=111.4
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHH
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 496 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~ 496 (577)
++++++++|..+|.|++|+|+.+||..+|. .+|..++..++..++. +++|.|+|+||+.++.......... .
T Consensus 3 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~---~ 74 (140)
T 1ggw_A 3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLR-ACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPG---D 74 (140)
T ss_dssp CCTTTHHHHHHTCSSSSSEECHHHHHHHHH-HTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSC---C
T ss_pred hHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcc---c
Confidence 456899999999999999999999999995 5899999999999987 8899999999998775432211111 1
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
...++.+|+.+|+|++|+|+.+||+.++...| +++.+|+.+|. +||.|+|+||+.+|..
T Consensus 75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence 24688899999999999999999999987655 48999999999 9999999999999863
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-20 Score=163.18 Aligned_cols=128 Identities=23% Similarity=0.329 Sum_probs=111.5
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHH
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 500 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~ 500 (577)
++++|..+|.|++|.|+.+||..+|. .+|..++..++..++.. +++|.|+|+||+..+..... .. ......+
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~-~~---~~~~~~l 78 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSALR-SLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIK-TP---TEQSKEM 78 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHHH-HTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCC-CG---GGGHHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHHH-HhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhh-cC---cccHHHH
Confidence 89999999999999999999999995 58999999999999988 88999999999987754310 11 1123468
Q ss_pred HHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 501 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 501 ~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
+.+|+.+|+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 79 ~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 79 LDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp HHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 8899999999999999999999997766 4899999999999999999999999975
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.80 E-value=9.9e-20 Score=165.96 Aligned_cols=128 Identities=27% Similarity=0.344 Sum_probs=112.9
Q ss_pred HHHhhhccccccccCCCCCCCCHHHHHHHHHhhCC-CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccH
Q 008127 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 494 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~ 494 (577)
.+.++++++|..+|.|++|+|+.+||..+|. .+| ..+++.++..+++.+|.|++|.|+|+||+..+...
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~--------- 73 (172)
T 2znd_A 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALS-NGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI--------- 73 (172)
T ss_dssp --CHHHHHHHHHHCTTCSSCEEHHHHHHHCC-CSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH---------
T ss_pred cchhHHHHHHHHhCCCCCCcCcHHHHHHHHH-hcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH---------
Confidence 3456899999999999999999999999994 466 67899999999999999999999999999765421
Q ss_pred HHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 495 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 495 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.+|+|++|+|+.+||+.++...| ++..+++.+|.|+||.|+|+||+.++..
T Consensus 74 ---~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 138 (172)
T 2znd_A 74 ---TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV 138 (172)
T ss_dssp ---HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred ---HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 2577899999999999999999999987766 4899999999999999999999988864
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=186.79 Aligned_cols=140 Identities=29% Similarity=0.559 Sum_probs=120.8
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++++++++++++|..+|.|+||.|+.+||..+|. .++..++.++++.+|+.+|.|++|.|+|+||+.++......
T Consensus 304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~-~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~-- 380 (450)
T 3sg6_A 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD-- 380 (450)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccc--
Confidence 356778889999999999999999999999999995 58999999999999999999999999999999877543221
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
... ...++.+|+.+|+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 381 ~~~---~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~~ 449 (450)
T 3sg6_A 381 TDS---EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449 (450)
T ss_dssp --C---HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred cch---hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 111 23678899999999999999999999998766 4899999999999999999999999863
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-19 Score=164.86 Aligned_cols=126 Identities=22% Similarity=0.338 Sum_probs=111.6
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCC-------CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~-------~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
++++++++|..+| |++|.|+.+||..+|...+| ..+++.++..+++.+|.|++|.|+|+||+..+...
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~---- 76 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI---- 76 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH----
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH----
Confidence 5778999999999 99999999999999965325 67889999999999999999999999999776531
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.+|+|++|+|+.+||+.++...| ++..++..+| |+||.|+|+||+.++..
T Consensus 77 --------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~ 140 (173)
T 1alv_A 77 --------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR 140 (173)
T ss_dssp --------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred --------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence 3577899999999999999999999987665 4889999999 99999999999988764
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.8e-19 Score=166.92 Aligned_cols=134 Identities=25% Similarity=0.319 Sum_probs=114.6
Q ss_pred HHHhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccH
Q 008127 416 EELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 494 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~d-~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~ 494 (577)
-..++++++|..||.| ++|+|+.+||..+|. .+|...+..++..+|..+|.|++|.|+|+||+.++...... ..
T Consensus 19 ~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~---~~- 93 (204)
T 1jba_A 19 ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFK-VPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRG---TL- 93 (204)
T ss_dssp HHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHH-CCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSC---CC-
T ss_pred CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHH-HhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccC---CH-
Confidence 3456788899999999 899999999999994 57888889999999999999999999999999877643221 11
Q ss_pred HHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc--------------------C---cHHHHHHHhCCCCCCcccHHHHH
Q 008127 495 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--------------------G---SIDPLLEEADIDKDGRISLSEFR 551 (577)
Q Consensus 495 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~--------------------~---~~~~~~~~~D~d~dG~i~~~EF~ 551 (577)
...++.+|+.+|+|++|+|+.+||+.++... . ++..+|+.+|.|+||.|+|+||+
T Consensus 94 --~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~ 171 (204)
T 1jba_A 94 --EHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171 (204)
T ss_dssp --THHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHH
T ss_pred --HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence 1367889999999999999999999887543 1 48889999999999999999999
Q ss_pred HHHhh
Q 008127 552 RLLRT 556 (577)
Q Consensus 552 ~~l~~ 556 (577)
.++..
T Consensus 172 ~~~~~ 176 (204)
T 1jba_A 172 EGARR 176 (204)
T ss_dssp HHHTT
T ss_pred HHHHc
Confidence 99974
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=99.78 E-value=8.1e-20 Score=172.13 Aligned_cols=144 Identities=24% Similarity=0.439 Sum_probs=115.5
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++++++++++++|..+|.|++|+|+.+||..++ .+|..++. +.+++.+|.|++|.|+|+||+.++........
T Consensus 21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~--~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~ 95 (208)
T 2ct9_A 21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP--ELAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIED 95 (208)
T ss_dssp HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH--HHHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--HcCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccc
Confidence 45788999999999999999999999999999865 35666554 56889999999999999999987764332111
Q ss_pred cc----------cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc-C------cHHHH----HHHhCCCCCCcccHHH
Q 008127 491 HD----------SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-G------SIDPL----LEEADIDKDGRISLSE 549 (577)
Q Consensus 491 ~~----------~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~------~~~~~----~~~~D~d~dG~i~~~E 549 (577)
.. .......++.+|+.||+|++|+|+.+||+.++... | ++..+ |+.+|.|+||.|+|+|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~E 175 (208)
T 2ct9_A 96 NEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTE 175 (208)
T ss_dssp ----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHH
T ss_pred hhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence 00 00123578899999999999999999999998764 5 35555 9999999999999999
Q ss_pred HHHHHhhccc
Q 008127 550 FRRLLRTASI 559 (577)
Q Consensus 550 F~~~l~~~~~ 559 (577)
|+.+|....+
T Consensus 176 F~~~~~~~~~ 185 (208)
T 2ct9_A 176 FVKVLEKVDV 185 (208)
T ss_dssp HHHTTTTSCG
T ss_pred HHHHHhccCh
Confidence 9999986543
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.77 E-value=8.5e-19 Score=161.37 Aligned_cols=138 Identities=25% Similarity=0.375 Sum_probs=113.1
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++++++.++.+.|+.+ |++|.|+.+||..++.......+++.++..+|+.+|.|++|.|+|+||+.++......
T Consensus 13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~-- 88 (183)
T 1s6c_A 13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRG-- 88 (183)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHC--
T ss_pred cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCC--
Confidence 456777777766666654 7899999999999996533344789999999999999999999999999877643221
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc------------------CcHHHHHHHhCCCCCCcccHHHHHH
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK------------------GSIDPLLEEADIDKDGRISLSEFRR 552 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~------------------~~~~~~~~~~D~d~dG~i~~~EF~~ 552 (577)
. ....++.+|+.+|+|++|+|+.+||+.++... .++..+|+.+|.|+||.|+|+||+.
T Consensus 89 -~---~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~ 164 (183)
T 1s6c_A 89 -T---VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE 164 (183)
T ss_dssp -C---HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred -C---HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 1 12467889999999999999999999888653 2488899999999999999999999
Q ss_pred HHhh
Q 008127 553 LLRT 556 (577)
Q Consensus 553 ~l~~ 556 (577)
+|..
T Consensus 165 ~~~~ 168 (183)
T 1s6c_A 165 SXQE 168 (183)
T ss_dssp HTTS
T ss_pred HHhc
Confidence 9865
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=166.60 Aligned_cols=137 Identities=21% Similarity=0.349 Sum_probs=116.8
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 491 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~ 491 (577)
.++++++..+.+.|.. .|++|.|+.+||..++....+...+...++.+|+.+|.|++|.|+|+||+.++......
T Consensus 60 ~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~--- 134 (229)
T 3dd4_A 60 KFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRG--- 134 (229)
T ss_dssp HHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHS---
T ss_pred CCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCC---
Confidence 4667888888888876 67889999999999997667777888899999999999999999999999877643321
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc------------------CcHHHHHHHhCCCCCCcccHHHHHHH
Q 008127 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK------------------GSIDPLLEEADIDKDGRISLSEFRRL 553 (577)
Q Consensus 492 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~------------------~~~~~~~~~~D~d~dG~i~~~EF~~~ 553 (577)
.. ...++.+|+.||+|++|+|+.+||..++... ..++.+|+.+|.|+||.|+|+||+.+
T Consensus 135 ~~---~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~ 211 (229)
T 3dd4_A 135 TV---QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIES 211 (229)
T ss_dssp CH---HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHH
T ss_pred Ch---HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHH
Confidence 11 2468889999999999999999999988653 24899999999999999999999999
Q ss_pred Hhh
Q 008127 554 LRT 556 (577)
Q Consensus 554 l~~ 556 (577)
+..
T Consensus 212 ~~~ 214 (229)
T 3dd4_A 212 CQK 214 (229)
T ss_dssp HHT
T ss_pred HHh
Confidence 975
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-18 Score=166.60 Aligned_cols=140 Identities=27% Similarity=0.412 Sum_probs=115.4
Q ss_pred cccchHHHhhhccccccccCC--CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh
Q 008127 411 STLDDEELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d--~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~ 488 (577)
..++++++.+++++|..+|.| ++|.|+.+||..+|.. +....+..+..+|+.+|.|++|.|+|+||+.++......
T Consensus 40 ~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~--~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~ 117 (226)
T 2zfd_A 40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPN 117 (226)
T ss_dssp SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS--CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTT
T ss_pred CCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc--cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccC
Confidence 468899999999999999999 9999999999999954 334455678889999999999999999999877643211
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc----CcC------c----HHHHHHHhCCCCCCcccHHHHHHHH
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG----LKG------S----IDPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~----~~~------~----~~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
.. ....++.+|+.+|+|++|+|+.+||+.++. ..| + +..+|+.+|.|+||.|+|+||+.+|
T Consensus 118 --~~---~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~ 192 (226)
T 2zfd_A 118 --AP---IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV 192 (226)
T ss_dssp --SC---HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHH
T ss_pred --CC---HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 11 124688899999999999999999999884 223 2 3556679999999999999999999
Q ss_pred hhc
Q 008127 555 RTA 557 (577)
Q Consensus 555 ~~~ 557 (577)
...
T Consensus 193 ~~~ 195 (226)
T 2zfd_A 193 LRH 195 (226)
T ss_dssp HHS
T ss_pred HhC
Confidence 864
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.77 E-value=6.4e-19 Score=164.57 Aligned_cols=128 Identities=18% Similarity=0.325 Sum_probs=112.8
Q ss_pred cchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCC-----CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhh
Q 008127 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 487 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~-----~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~ 487 (577)
+++.+++++++ |..+|.|++|+|+.+||..+|.. +|. .+++.+++.+|+.+|.|++|.|+|+||+..+...
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~-- 102 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-- 102 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHH-HTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH--
T ss_pred CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHH-hcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH--
Confidence 45567889999 99999999999999999999954 665 5789999999999999999999999999866432
Q ss_pred hcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 488 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 488 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.+|+|++|+|+.+||+.++...+ +++.++..+ |+||.|+|+||+.++..
T Consensus 103 ----------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~ 165 (198)
T 1juo_A 103 ----------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVK 165 (198)
T ss_dssp ----------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHH
T ss_pred ----------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 2577899999999999999999999997766 488999999 89999999999998764
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.5e-20 Score=171.12 Aligned_cols=151 Identities=19% Similarity=0.257 Sum_probs=121.9
Q ss_pred ccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHh-----hCCCCccHHHHHHHH---------HhhcCCCCcceeh
Q 008127 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-----DLPWKLKESRVLEIL---------QAIDCNTDGLVDF 475 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~-----~~~~~~~~~~~~~~~---------~~~D~d~dg~i~f 475 (577)
...++++++++++++|..+|.|++|+|+.+||..++.. .+|..++..++..++ ..+|.|++|.|+|
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~ 84 (186)
T 2hps_A 5 TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVN 84 (186)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHH
T ss_pred cccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccH
Confidence 34567788999999999999999999999999999954 248888899999884 9999999999999
Q ss_pred hhHHHHHhhhhhhcccccHHHHHHHHHHH--hhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccH
Q 008127 476 SEFVAATLHVHQLEEHDSEKWHLRSQAAF--EKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISL 547 (577)
Q Consensus 476 ~EF~~~~~~~~~~~~~~~~~~~~~~~~~F--~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~ 547 (577)
+| .++..... . ......+..+| +.||+|++|+|+.+||+.++...+ ++..+|+.+|.|+||.|+|
T Consensus 85 ~E--~~~~~~~~--~---~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~ 157 (186)
T 2hps_A 85 AT--DSLLKMKG--E---EKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISR 157 (186)
T ss_dssp HH--HHHHHCCT--H---HHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEH
T ss_pred HH--HHHHHhcC--C---hHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcH
Confidence 99 33322111 1 01112344566 888999999999999999987666 4899999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCC
Q 008127 548 SEFRRLLRTASISSRNVPPS 567 (577)
Q Consensus 548 ~EF~~~l~~~~~~~~~~~~~ 567 (577)
+||+.+|.....+.++..|+
T Consensus 158 ~ef~~~~~~~~~~~~~~~~~ 177 (186)
T 2hps_A 158 DEFLVTVNDFLFGLEETALA 177 (186)
T ss_dssp HHHHHHHHHHHHCSSCCHHH
T ss_pred HHHHHHHHHHhcCCCCCCcc
Confidence 99999999877766665543
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.1e-19 Score=157.07 Aligned_cols=129 Identities=16% Similarity=0.148 Sum_probs=111.6
Q ss_pred hHHHhhhccccccccCCC-CCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccccc
Q 008127 415 DEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 493 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~-dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~ 493 (577)
.+++.+++++|..+|.|+ +|.|+.+||..+|. .+|..++..++..++..+|.+ |+|+||+..+..... ....
T Consensus 10 ~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~--~~~~ 82 (146)
T 2qac_A 10 LEEKVDESDVRIYFNEKSSGGKISIDNASYNAR-KLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVH--DKDN 82 (146)
T ss_dssp HHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCC--TTCC
T ss_pred HHHHHHHHHHHHHhCccCCCCcccHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhc--Ccch
Confidence 456788999999999999 99999999999995 589999999999999999987 999999987754211 1111
Q ss_pred HHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 494 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 494 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
...++.+|+.||+|++|+|+.+||+.++...| +++.++..+ |+||.|+|+||+.+|.
T Consensus 83 ---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 83 ---VEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp ---HHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred ---HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 23688899999999999999999999997766 488999999 9999999999999985
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-18 Score=161.39 Aligned_cols=133 Identities=20% Similarity=0.368 Sum_probs=110.9
Q ss_pred hhhccccccccCC-CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHH
Q 008127 419 ADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 497 (577)
Q Consensus 419 ~~l~~~F~~~D~d-~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~ 497 (577)
++++++|..+|.| ++|.|+.+||..++....+...+..++..+|+.+|.|++|.|+|+||+.++..... ... .
T Consensus 25 ~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~---~~~---~ 98 (190)
T 2l2e_A 25 KELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSR---GEL---N 98 (190)
T ss_dssp HHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSC---SCS---H
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcC---CCH---H
Confidence 3567789999999 89999999999999664345567788999999999999999999999987754321 111 2
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCc------------------CcHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLK------------------GSIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~------------------~~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++.+|+.+|.|++|+|+.+||..++... .++..+|+.+|.|+||.|+|+||+.++...
T Consensus 99 ~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 176 (190)
T 2l2e_A 99 DKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRD 176 (190)
T ss_dssp HHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTC
T ss_pred HHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 367889999999999999999999887651 148899999999999999999999999763
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-18 Score=163.14 Aligned_cols=140 Identities=25% Similarity=0.419 Sum_probs=115.4
Q ss_pred cccchHHHhhhccccccccCC--CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh
Q 008127 411 STLDDEELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d--~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~ 488 (577)
..++++++.+++++|..+|.| ++|.|+.+||..+|.. .....+..++.+|..+|.|++|.|+|+||+.++......
T Consensus 29 ~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~--~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~ 106 (207)
T 2ehb_A 29 TPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR--NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPS 106 (207)
T ss_dssp SSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS--CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTT
T ss_pred CCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc--cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccC
Confidence 468889999999999999999 9999999999999954 334445678889999999999999999999877643211
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcC----cC------c----HHHHHHHhCCCCCCcccHHHHHHHH
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL----KG------S----IDPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~----~~------~----~~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
.. ....++.+|+.+|+|++|+|+.+||+.++.. .+ + +..+|+.+|.|+||.|+|+||+.+|
T Consensus 107 --~~---~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 181 (207)
T 2ehb_A 107 --AP---VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFV 181 (207)
T ss_dssp --SC---HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred --CC---HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 11 1246888999999999999999999998842 22 2 3556679999999999999999999
Q ss_pred hhc
Q 008127 555 RTA 557 (577)
Q Consensus 555 ~~~ 557 (577)
...
T Consensus 182 ~~~ 184 (207)
T 2ehb_A 182 SLN 184 (207)
T ss_dssp HHC
T ss_pred HhC
Confidence 864
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.3e-18 Score=162.94 Aligned_cols=137 Identities=24% Similarity=0.339 Sum_probs=112.2
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
.++.++++++.+.|+.. |++|.|+.+||..++.. ++. ..++.++..+|+.+|.|++|.|+|+||+.++......
T Consensus 47 ~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~-l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~-- 121 (224)
T 1s1e_A 47 NFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQ-FFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRG-- 121 (224)
T ss_dssp SCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHT-TCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHH-hcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccC--
Confidence 47777766666555543 48999999999999965 554 4789999999999999999999999999877643321
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc------------------CcHHHHHHHhCCCCCCcccHHHHHH
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK------------------GSIDPLLEEADIDKDGRISLSEFRR 552 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~------------------~~~~~~~~~~D~d~dG~i~~~EF~~ 552 (577)
.. ...++.+|+.+|+|++|+|+.+||+.++... .++..+|+.+|.|+||.|+|+||+.
T Consensus 122 -~~---~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~ 197 (224)
T 1s1e_A 122 -TV---HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE 197 (224)
T ss_dssp -CH---HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHH
T ss_pred -CH---HHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 11 2467889999999999999999999887543 2388999999999999999999999
Q ss_pred HHhhc
Q 008127 553 LLRTA 557 (577)
Q Consensus 553 ~l~~~ 557 (577)
++...
T Consensus 198 ~~~~~ 202 (224)
T 1s1e_A 198 SCQED 202 (224)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99763
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-18 Score=157.11 Aligned_cols=114 Identities=16% Similarity=0.202 Sum_probs=99.6
Q ss_pred ccCCCCCCCCHHHHHHHHHhhC------CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHH
Q 008127 428 IDVDKNGSISLEEMRQALAKDL------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 501 (577)
Q Consensus 428 ~D~d~dG~i~~~el~~~l~~~~------~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~ 501 (577)
=+.|++|+|+.+||..+|.. + |..+++++++.+++.+|.|++|.|+|+||+.++... ..++
T Consensus 13 ~~~~~dG~I~~~EL~~~l~~-l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------------~~l~ 79 (174)
T 2i7a_A 13 GLVPRGSDIDATQLQGLLNQ-ELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------------VHYQ 79 (174)
T ss_dssp CSCC-CCCEEHHHHHHHHHH-HHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------------HHHH
T ss_pred ccCCCCCcCCHHHHHHHHHH-HHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------------HHHH
Confidence 37899999999999999954 5 668889999999999999999999999999866431 2577
Q ss_pred HHHhhcCCCCCCcccHHHHhhhhcCc----C------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 502 AAFEKFDIDRDGFITPEELRMHTGLK----G------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 502 ~~F~~~D~d~~G~I~~~El~~~l~~~----~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.+|+.|| |++|+|+.+||+.++... | +++.+++.+| |+||.|+|+||+.+|..
T Consensus 80 ~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~ 142 (174)
T 2i7a_A 80 HVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR 142 (174)
T ss_dssp HHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH
T ss_pred HHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH
Confidence 8999999 999999999999999887 6 4889999999 99999999999988864
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-18 Score=160.17 Aligned_cols=136 Identities=24% Similarity=0.368 Sum_probs=113.1
Q ss_pred cccchHHHhhhccccccccC-----CC-C--CCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcc-eehhhHHHH
Q 008127 411 STLDDEELADLRDQFDAIDV-----DK-N--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVAA 481 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~-----d~-d--G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~-i~f~EF~~~ 481 (577)
+.++++++.+++++|..+|. |+ + |.|+.+||.. | +.+|..++.. .++..+|.|++|. |+|+||+.+
T Consensus 12 ~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l-~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~ 86 (183)
T 1dgu_A 12 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-L-PELKANPFKE---RICRVFSTSPAKDSLSFEDFLDL 86 (183)
T ss_dssp CSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-S-TTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-H-HhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHH
Confidence 46788999999999999999 68 8 9999999999 7 5688887754 5788899999999 999999987
Q ss_pred HhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-----------cHH----HHHHHhCCCCCCccc
Q 008127 482 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SID----PLLEEADIDKDGRIS 546 (577)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~----~~~~~~D~d~dG~i~ 546 (577)
+....... . ....++.+|+.||+|++|+|+.+||+.++...+ ++. .+|..+|.|+||.|+
T Consensus 87 ~~~~~~~~--~---~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~ 161 (183)
T 1dgu_A 87 LSVFSDTA--T---PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTIN 161 (183)
T ss_dssp HHHHSTTC--C---HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEE
T ss_pred HHHhcCCC--C---HHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEc
Confidence 76432211 1 123688899999999999999999999886542 233 499999999999999
Q ss_pred HHHHHHHHhh
Q 008127 547 LSEFRRLLRT 556 (577)
Q Consensus 547 ~~EF~~~l~~ 556 (577)
|+||+.+|..
T Consensus 162 ~~EF~~~~~~ 171 (183)
T 1dgu_A 162 LSEFQHVISR 171 (183)
T ss_dssp HHHHHHHHCS
T ss_pred HHHHHHHHHh
Confidence 9999999975
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-18 Score=163.72 Aligned_cols=131 Identities=24% Similarity=0.347 Sum_probs=106.5
Q ss_pred hhhccccccccCC-CCCCCCHHHHHHHHHhhCCCCccH-HHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHH
Q 008127 419 ADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 496 (577)
Q Consensus 419 ~~l~~~F~~~D~d-~dG~i~~~el~~~l~~~~~~~~~~-~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~ 496 (577)
++++++|+.||.+ ++|+|+.+||..+| +.++..+.. .++..+|..+|.|++|.|+|+||+.++..... .. .
T Consensus 19 ~ei~~~f~~fD~~~~~G~is~~El~~~l-~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~---~~---~ 91 (211)
T 2ggz_A 19 QETHVWYRTFMMEYPSGLQTLHEFKTLL-GLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQ---EK---M 91 (211)
T ss_dssp -----CCCSHHHHCTTSEEEHHHHHHHT-TCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSC---SS---H
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHH-HHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhcc---Cc---h
Confidence 4578899999998 99999999999999 457776554 56999999999999999999999987764321 11 1
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
...++.+|+.||+|++|+|+.+||+.++...+ .+..+|+.+|.|+||.|+|+||+.+|..
T Consensus 92 ~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 163 (211)
T 2ggz_A 92 EQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163 (211)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence 24678899999999999999999998886542 2788999999999999999999999874
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-18 Score=159.42 Aligned_cols=131 Identities=15% Similarity=0.257 Sum_probs=108.6
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhc---CCCCcceehhhHHHHHhhhhhhcc
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID---CNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D---~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
+.+++.+++++|..+| ++|+|+.+||..+| |..+++..+..++..+| .+++|.|+|+||+..+.... .
T Consensus 23 ~~~~~~~~~~~F~~~D--~dG~I~~~el~~~l----g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~---~ 93 (179)
T 3a8r_A 23 GNDGWAAVEKRFNQLQ--VDGVLLRSRFGKCI----GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLT---D 93 (179)
T ss_dssp CCCCHHHHHHHHHHHC--BTTBEEGGGHHHHH----TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHH---C
T ss_pred chhhHHHHHHHHhccC--CCCCCcHHHHHHHH----CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHc---C
Confidence 3356788999999999 89999999999865 66788888999999888 56789999999998764321 1
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc-CcC-------------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG-LKG-------------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~-~~~-------------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.. ....++.+|+.||+|+||+|+.+||+.++. ..| +++.+|+.+|.|+||.|+|+||+.+|..
T Consensus 94 ~~---~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 170 (179)
T 3a8r_A 94 QG---FDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ 170 (179)
T ss_dssp CC---HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC-
T ss_pred CC---HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 11 134788999999999999999999999886 322 4788999999999999999999999975
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-18 Score=162.72 Aligned_cols=132 Identities=23% Similarity=0.346 Sum_probs=110.9
Q ss_pred HhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCCccH-HHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHH
Q 008127 418 LADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 495 (577)
Q Consensus 418 ~~~l~~~F~~~D~d-~dG~i~~~el~~~l~~~~~~~~~~-~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~ 495 (577)
.++++++|..||.+ ++|+|+.+||..+| +.+|..++. .++..+|..+|.|++|.|+|+||+.++..... ...
T Consensus 13 ~~el~~~f~~fd~~~~~G~i~~~e~~~~l-~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~---~~~-- 86 (198)
T 2r2i_A 13 ATECHQWYKKFMTECPSGQLTLYEFKQFF-GLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLK---GKV-- 86 (198)
T ss_dssp TSCHHHHHHHHHHHCTTSEECHHHHHHHH-TCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSS---CCH--
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHH-HHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHcc---Cch--
Confidence 45678889999998 89999999999999 457776665 45999999999999999999999987754321 111
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-------------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 496 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 496 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
...++.+|+.||+|++|+|+.+||+.++...+ .+..+|+.+|.|+||.|+|+||+.++..
T Consensus 87 -~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 159 (198)
T 2r2i_A 87 -DQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159 (198)
T ss_dssp -HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred -HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 23678899999999999999999999886542 2788999999999999999999999864
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.75 E-value=2.4e-18 Score=172.73 Aligned_cols=130 Identities=23% Similarity=0.343 Sum_probs=115.3
Q ss_pred HHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHH-HHHhhcCCCCcceehhhHHHHHhhhhhhcccccH
Q 008127 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 494 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~-~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~ 494 (577)
.....+..+|..+|.|++|+|+.+||..+| +|..++..++.. +|..+|.|++|.|+|+||+.++....
T Consensus 185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l---~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~-------- 253 (323)
T 1ij5_A 185 NDLAALVADFRKIDTNSNGTLSRKEFREHF---VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL-------- 253 (323)
T ss_dssp HHHHTSCCCHHHHCTTCCSEECHHHHHHHH---HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH--------
T ss_pred hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH---cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH--------
Confidence 456789999999999999999999999998 577788899999 99999999999999999998765432
Q ss_pred HHHHHHHHHHhhcCCCCCCcccHHHHhhhh-cCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhcccC
Q 008127 495 KWHLRSQAAFEKFDIDRDGFITPEELRMHT-GLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTASIS 560 (577)
Q Consensus 495 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l-~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~~~ 560 (577)
.+..+|+.||+|++|+|+.+||+.++ ...| ++..+|..+|.|+||.|+|+||+.+|.....|
T Consensus 254 ----~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~~~~S 322 (323)
T 1ij5_A 254 ----VLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLMFHD 322 (323)
T ss_dssp ----HHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHHHC--
T ss_pred ----HHHHHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHhcCC
Confidence 46779999999999999999999999 6665 59999999999999999999999999876543
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.75 E-value=4e-18 Score=154.47 Aligned_cols=119 Identities=18% Similarity=0.321 Sum_probs=105.2
Q ss_pred cccccccCCCCCCCCHHHHHHHHHhhCCC-----CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHH
Q 008127 423 DQFDAIDVDKNGSISLEEMRQALAKDLPW-----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 497 (577)
Q Consensus 423 ~~F~~~D~d~dG~i~~~el~~~l~~~~~~-----~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~ 497 (577)
+.|..+|.|++|.|+.+||..++.. +|. .++..+++.+|+.+|.|++|.|+|+||+.++...
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------------ 71 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------------ 71 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHH-HTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------------
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHh-hcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------------
Confidence 3588999999999999999999954 665 6789999999999999999999999999866432
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.+|+|++|+|+.+||+.++...| ++..++..+ |+||.|+|+||+.++..
T Consensus 72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~ 134 (167)
T 1gjy_A 72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVK 134 (167)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHH
Confidence 2577899999999999999999999998776 488899998 89999999999998854
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.7e-18 Score=154.34 Aligned_cols=119 Identities=18% Similarity=0.310 Sum_probs=105.2
Q ss_pred cccccccCCCCCCCCHHHHHHHHHhhCCC-----CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHH
Q 008127 423 DQFDAIDVDKNGSISLEEMRQALAKDLPW-----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 497 (577)
Q Consensus 423 ~~F~~~D~d~dG~i~~~el~~~l~~~~~~-----~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~ 497 (577)
..|..+|.|++|.|+.+||..+|. .+|. .+++.++..+++.+|.|++|.|+|+||+.++...
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~-~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------------ 69 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLT-QSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------------ 69 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHH-HHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------------
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHH-HhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------------
Confidence 358999999999999999999995 4675 6789999999999999999999999999866431
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.+|+|++|+|+.+||+.++...| ++..++..+ |+||.|+|+||+.++..
T Consensus 70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~ 132 (165)
T 1k94_A 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVK 132 (165)
T ss_dssp HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 2577899999999999999999999997766 488899999 89999999999998864
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.5e-18 Score=158.20 Aligned_cols=137 Identities=21% Similarity=0.382 Sum_probs=111.7
Q ss_pred ccchHHHhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 412 TLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d-~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
.++.+ +++++|..||.+ ++|.|+.+||..++....+...+..++..+|..+|.|++|.|+|+||+.++......
T Consensus 21 ~~~~~---~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~-- 95 (190)
T 1g8i_A 21 YFTEK---EVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRG-- 95 (190)
T ss_dssp SSCHH---HHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHC--
T ss_pred CCCHH---HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCC--
Confidence 44544 456677778877 899999999999996644545667889999999999999999999999877543221
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc----C--------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR 552 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~EF~~ 552 (577)
.. ...++.+|+.+|+|++|+|+.+||+.++... | ++..+|+.+|.|+||.|+|+||+.
T Consensus 96 -~~---~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~ 171 (190)
T 1g8i_A 96 -TL---DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQE 171 (190)
T ss_dssp -CH---HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHH
T ss_pred -CH---HHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHH
Confidence 11 2367889999999999999999999887651 1 488999999999999999999999
Q ss_pred HHhhc
Q 008127 553 LLRTA 557 (577)
Q Consensus 553 ~l~~~ 557 (577)
++...
T Consensus 172 ~~~~~ 176 (190)
T 1g8i_A 172 GSKAD 176 (190)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99763
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.8e-18 Score=160.40 Aligned_cols=132 Identities=19% Similarity=0.254 Sum_probs=110.0
Q ss_pred hhhccccccccCC-CCCCCCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHH
Q 008127 419 ADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 496 (577)
Q Consensus 419 ~~l~~~F~~~D~d-~dG~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~ 496 (577)
+++..+|..||.+ ++|.|+.+||..++.. ++. ..+..++..+|+.+|.|++|.|+|+||+.++....... ..
T Consensus 33 ~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~-~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~--~~--- 106 (207)
T 2d8n_A 33 EELCSWYQSFLKDCPTGRITQQQFQSIYAK-FFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGK--TN--- 106 (207)
T ss_dssp HHHHHHHHHHHHHCTTSEEEHHHHHHHHHH-TCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSS--SS---
T ss_pred HHHHHHHHHHHhhCCCCCCCHHHHHHHHHH-hccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCC--HH---
Confidence 3566678888888 7999999999999965 554 37888999999999999999999999998776432211 11
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCc----C----------------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G----------------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~----------------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.+|+|++|+|+.+||+.++... | ++..+|+.+|.|+||.|+|+||+.+|..
T Consensus 107 -~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 185 (207)
T 2d8n_A 107 -QKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLA 185 (207)
T ss_dssp -TTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHH
T ss_pred -HHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHh
Confidence 256779999999999999999999888654 3 3899999999999999999999999986
Q ss_pred c
Q 008127 557 A 557 (577)
Q Consensus 557 ~ 557 (577)
.
T Consensus 186 ~ 186 (207)
T 2d8n_A 186 N 186 (207)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-18 Score=165.11 Aligned_cols=136 Identities=24% Similarity=0.359 Sum_probs=111.8
Q ss_pred cccchHHHhhhccccccccC-----CC-C--CCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcc-eehhhHHHH
Q 008127 411 STLDDEELADLRDQFDAIDV-----DK-N--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVAA 481 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~-----d~-d--G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~-i~f~EF~~~ 481 (577)
+.++++++.++.++|..+|. |+ + |+|+.+||.. | ..+|..++. +.+|+.+|.|++|. |+|+||+.+
T Consensus 43 t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l-~~lg~~~~~---~~lf~~~D~d~dG~~I~f~EF~~~ 117 (214)
T 2l4h_A 43 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-L-PELKANPFK---ERICRVFSTSPAKDSLSFEDFLDL 117 (214)
T ss_dssp CSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-C-HHHHTSTTH---HHHHHHHCCSSSCCSEEHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-h-hccCCChHH---HHHHHHhCcCCCCCEecHHHHHHH
Confidence 57899999999999999998 66 6 9999999998 6 446777664 46788899999999 999999987
Q ss_pred HhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-----------cHH----HHHHHhCCCCCCccc
Q 008127 482 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SID----PLLEEADIDKDGRIS 546 (577)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~----~~~~~~D~d~dG~i~ 546 (577)
+...... .. ....++.+|+.||+|++|+|+.+||+.++...+ +++ .+|+.+|.|+||.|+
T Consensus 118 ~~~~~~~--~~---~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is 192 (214)
T 2l4h_A 118 LSVFSDT--AT---PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTIN 192 (214)
T ss_dssp HHHTSSC--SC---HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBC
T ss_pred HHHHcCC--CC---HHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCC
Confidence 7643221 11 124688899999999999999999998875431 244 599999999999999
Q ss_pred HHHHHHHHhh
Q 008127 547 LSEFRRLLRT 556 (577)
Q Consensus 547 ~~EF~~~l~~ 556 (577)
|+||+.++..
T Consensus 193 ~~EF~~~~~~ 202 (214)
T 2l4h_A 193 LSEFQHVISR 202 (214)
T ss_dssp SHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999975
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.73 E-value=7.1e-18 Score=156.55 Aligned_cols=135 Identities=22% Similarity=0.409 Sum_probs=109.8
Q ss_pred ccchHHHhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCC-ccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc
Q 008127 412 TLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d-~dG~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~ 489 (577)
.++.++ ++++|..||.+ ++|.|+.+||..++.. ++.. .....+..+|..+|.|++|.|+|+||+.++.....
T Consensus 21 ~~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~-- 94 (193)
T 1bjf_A 21 DFTEHE---IQEWYKGFLRDCPSGHLSMEEFKKIYGN-FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSR-- 94 (193)
T ss_dssp SCCHHH---HHHHHHHHHHHSTTSEEEHHHHHHHHTT-TSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTS--
T ss_pred CCCHHH---HHHHHHHHHHHCCCCCcCHHHHHHHHHH-hcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcC--
Confidence 456554 56678888888 8999999999999954 5543 35678999999999999999999999987754321
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc----C--------------cHHHHHHHhCCCCCCcccHHHHH
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFR 551 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~EF~ 551 (577)
... ...++.+|+.+|+|++|+|+.+||..++... | .+..+|+.+|.|+||.|+|+||+
T Consensus 95 -~~~---~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~ 170 (193)
T 1bjf_A 95 -GKL---EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFI 170 (193)
T ss_dssp -SCH---HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHH
T ss_pred -CCH---HHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence 111 2467889999999999999999999887531 2 28899999999999999999999
Q ss_pred HHHhh
Q 008127 552 RLLRT 556 (577)
Q Consensus 552 ~~l~~ 556 (577)
.++..
T Consensus 171 ~~~~~ 175 (193)
T 1bjf_A 171 RGAKS 175 (193)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99864
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.73 E-value=8e-18 Score=170.50 Aligned_cols=143 Identities=17% Similarity=0.220 Sum_probs=98.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC-----------ch--------hhHHHHHHHHHHHHHhcCCC
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI-----------LP--------IAVEDVKREVKILQALAGHE 157 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-----------~~--------~~~~~~~~E~~~l~~l~~hp 157 (577)
-|.++..||+|+||.||+|.+. +|+.||||++...... .. .......+|...|.+|. ++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~-~~ 173 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY-EE 173 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH-hc
Confidence 3999999999999999999974 7999999987532110 00 01112346777888884 44
Q ss_pred CeeEEEEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCcee
Q 008127 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 237 (577)
Q Consensus 158 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiH 237 (577)
++.-..-+.... .+|||||++|++|... .....+..++.||+.+|.+||.+||||
T Consensus 174 gv~vp~p~~~~~--~~LVME~i~G~~L~~l-----------------------~~~~~~~~l~~qll~~l~~lH~~gIVH 228 (397)
T 4gyi_A 174 GFPVPEPIAQSR--HTIVMSLVDALPMRQV-----------------------SSVPDPASLYADLIALILRLAKHGLIH 228 (397)
T ss_dssp TCSCCCEEEEET--TEEEEECCSCEEGGGC-----------------------CCCSCHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCCCCeeeeccC--ceEEEEecCCccHhhh-----------------------cccHHHHHHHHHHHHHHHHHHHCCCcC
Confidence 432211111122 3799999998887431 112245678899999999999999999
Q ss_pred ccCCCCcEEeecCCCC-------CCeeEEecCCCcc
Q 008127 238 RDMKPENFLFKSAKED-------SSLKATDFGLSDF 266 (577)
Q Consensus 238 rDlKp~NILl~~~~~~-------~~vkl~DFGla~~ 266 (577)
|||||.|||++..++. ..+.|+||+-+..
T Consensus 229 rDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 229 GDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence 9999999999852210 1388999986643
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-17 Score=153.62 Aligned_cols=136 Identities=22% Similarity=0.391 Sum_probs=109.1
Q ss_pred ccchHHHhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 412 TLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d-~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
.++++++ +++|..||.+ ++|.|+.+||..++....+...+...+..+|..+|.|++|.|+|+||..++......
T Consensus 21 ~~~~~~i---~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~-- 95 (190)
T 1fpw_A 21 YFDRREI---QQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRG-- 95 (190)
T ss_dssp CSTHHHH---HHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCC--
T ss_pred CCCHHHH---HHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccC--
Confidence 4566554 4556666665 899999999999996543444556789999999999999999999999877543211
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc----C--------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR 552 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~EF~~ 552 (577)
.. ...++.+|+.+|.|++|+|+.+||..++... | ++..+|+.+|.|+||.|+|+||+.
T Consensus 96 -~~---~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~ 171 (190)
T 1fpw_A 96 -TL---EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFRE 171 (190)
T ss_dssp -CS---THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHH
T ss_pred -Cc---HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 11 1367789999999999999999999887651 1 388999999999999999999999
Q ss_pred HHhh
Q 008127 553 LLRT 556 (577)
Q Consensus 553 ~l~~ 556 (577)
++..
T Consensus 172 ~~~~ 175 (190)
T 1fpw_A 172 GSKV 175 (190)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 9976
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.71 E-value=3.8e-18 Score=166.49 Aligned_cols=141 Identities=20% Similarity=0.288 Sum_probs=114.7
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccH------HHHHHHHHhhcCCCCcceehhhHHHHHhhh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKE------SRVLEILQAIDCNTDGLVDFSEFVAATLHV 485 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~------~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~ 485 (577)
.+++.+.++++++|..+|.|++|.|+.+||..+|. .+|..++. .++..+|..+|.|++|.|+|+||+..+...
T Consensus 9 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~-~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~ 87 (263)
T 2f33_A 9 QSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQ-ELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTE 87 (263)
T ss_dssp TTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHH-HHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSC
T ss_pred hcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHH-HHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhh
Confidence 45667788999999999999999999999999995 46655554 789999999999999999999999876432
Q ss_pred hh------hcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc----C------cHHH----HHHHhCCCCCCcc
Q 008127 486 HQ------LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G------SIDP----LLEEADIDKDGRI 545 (577)
Q Consensus 486 ~~------~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~------~~~~----~~~~~D~d~dG~i 545 (577)
.. ...... ...++.+|+.+|+|++|+|+.+||+.++... | ++.. ++..+|.|+||.|
T Consensus 88 ~~~~~~~~~~~~~~---~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i 164 (263)
T 2f33_A 88 ENFLLLFRCQQLKS---CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKL 164 (263)
T ss_dssp TTHHHHHGGGTSSC---HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCB
T ss_pred hhHHHHHHHhhccH---HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeE
Confidence 00 011111 2468889999999999999999999988654 3 2444 9999999999999
Q ss_pred cHHHHHHHHhh
Q 008127 546 SLSEFRRLLRT 556 (577)
Q Consensus 546 ~~~EF~~~l~~ 556 (577)
+|+||+.++..
T Consensus 165 ~~~ef~~~~~~ 175 (263)
T 2f33_A 165 ELTEMARLLPV 175 (263)
T ss_dssp CHHHHHHHSCT
T ss_pred cHHHHHHHHHH
Confidence 99999998753
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-17 Score=162.70 Aligned_cols=135 Identities=20% Similarity=0.317 Sum_probs=111.3
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhC----CCCccHHHHHH----HHHhhcCCCCcceehhhHHHHHhhh----
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDL----PWKLKESRVLE----ILQAIDCNTDGLVDFSEFVAATLHV---- 485 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~----~~~~~~~~~~~----~~~~~D~d~dg~i~f~EF~~~~~~~---- 485 (577)
..+++.+|..+|.|++|+|+.+||..+|.. + |..+++.++.. ++..+|.|++|.|+|+||+.++...
T Consensus 102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~ 180 (263)
T 2f33_A 102 CEEFMKTWRKYDTDHSGFIETEELKNFLKD-LLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFL 180 (263)
T ss_dssp HHHHHHHHTTSSTTTCSSBCHHHHHHHHHH-HHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-HHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHH
Confidence 456889999999999999999999999955 4 88888888877 9999999999999999999876431
Q ss_pred -hhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----------cHHHHHHH-hCCCCCCcccHHHHHHH
Q 008127 486 -HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDPLLEE-ADIDKDGRISLSEFRRL 553 (577)
Q Consensus 486 -~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~~~~~-~D~d~dG~i~~~EF~~~ 553 (577)
........ ...++.+|+.||+|++|+|+.+||+.++...+ ++..++.. +|.|+||.|+|+||+.+
T Consensus 181 ~~~~~~~~~---~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~ 257 (263)
T 2f33_A 181 LKFQGIKMC---GKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALI 257 (263)
T ss_dssp HHHHHTCCC---HHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGGTHHH
T ss_pred HHhcCcchH---HHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHHHHHH
Confidence 00001111 24678899999999999999999998875332 58888887 79999999999999999
Q ss_pred Hhh
Q 008127 554 LRT 556 (577)
Q Consensus 554 l~~ 556 (577)
|..
T Consensus 258 ~~~ 260 (263)
T 2f33_A 258 LSA 260 (263)
T ss_dssp HCC
T ss_pred Hhc
Confidence 975
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.8e-17 Score=158.94 Aligned_cols=137 Identities=21% Similarity=0.368 Sum_probs=112.1
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 491 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~ 491 (577)
.++.+++..+.+.|+. .+++|.|+.+||..++....+...+..++..+|..+|.|++|.|+|+||+.++..... .
T Consensus 87 ~~s~~ei~~l~~~fd~--~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~---~ 161 (256)
T 2jul_A 87 KFTKKELQSLYRGFKN--ECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLR---G 161 (256)
T ss_dssp TSCHHHHHHHHHHHHH--HCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHS---C
T ss_pred CCCHHHHHHHHHHHHh--hCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhc---c
Confidence 4677776666555542 2489999999999999665456778889999999999999999999999987764321 1
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc----C--------------cHHHHHHHhCCCCCCcccHHHHHHH
Q 008127 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRRL 553 (577)
Q Consensus 492 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~EF~~~ 553 (577)
.. ...++.+|+.+|.|++|+|+.+||..++... | +++.+|+.+|.|+||.|+|+||+.+
T Consensus 162 ~~---~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~ 238 (256)
T 2jul_A 162 TV---HEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLET 238 (256)
T ss_dssp CH---HHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHH
T ss_pred Ch---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHH
Confidence 11 2467889999999999999999999887543 2 4889999999999999999999999
Q ss_pred Hhh
Q 008127 554 LRT 556 (577)
Q Consensus 554 l~~ 556 (577)
+..
T Consensus 239 ~~~ 241 (256)
T 2jul_A 239 CQK 241 (256)
T ss_dssp HHH
T ss_pred HHh
Confidence 975
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-17 Score=163.74 Aligned_cols=139 Identities=21% Similarity=0.328 Sum_probs=109.4
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhC---CCCccHHHHH----HHHHhhcCCCCcceehhhHHHHHhhhh----
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDL---PWKLKESRVL----EILQAIDCNTDGLVDFSEFVAATLHVH---- 486 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~---~~~~~~~~~~----~~~~~~D~d~dg~i~f~EF~~~~~~~~---- 486 (577)
..+++.+|..+|.|++|+|+.+||..++.... |..+++.++. .+|..+|.|++|.|+|+||+..+....
T Consensus 103 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~ 182 (272)
T 2be4_A 103 SVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLL 182 (272)
T ss_dssp HHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSST
T ss_pred HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHh
Confidence 35688999999999999999999999995521 7788887765 499999999999999999987653210
Q ss_pred --hhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----------cHHH----HHHHhCCCCCCcccHHHH
Q 008127 487 --QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDP----LLEEADIDKDGRISLSEF 550 (577)
Q Consensus 487 --~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~----~~~~~D~d~dG~i~~~EF 550 (577)
.............++.+|+.+|+|++|+|+.+||+.++...+ +++. +|..+|.|+||.|+|+||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF 262 (272)
T 2be4_A 183 QFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSEL 262 (272)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHH
T ss_pred hhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 000001112235688899999999999999999998886432 2444 999999999999999999
Q ss_pred HHHHhh
Q 008127 551 RRLLRT 556 (577)
Q Consensus 551 ~~~l~~ 556 (577)
+.+|..
T Consensus 263 ~~~~~~ 268 (272)
T 2be4_A 263 ALCLGL 268 (272)
T ss_dssp HHHTTC
T ss_pred HHHHcc
Confidence 999874
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-17 Score=163.27 Aligned_cols=142 Identities=25% Similarity=0.415 Sum_probs=113.7
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHh---hCCC--CccHHHHHHH----HHhhcCCCCcceehhhHHHHH
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK---DLPW--KLKESRVLEI----LQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~---~~~~--~~~~~~~~~~----~~~~D~d~dg~i~f~EF~~~~ 482 (577)
.++..+.++++++|..+|.|++|+|+.+||..+|.. .+|. .+++.++..+ |..+|.|++|.|+|+||+.++
T Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~ 83 (272)
T 2be4_A 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI 83 (272)
T ss_dssp CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence 355566778999999999999999999999999952 5788 8888888764 478999999999999999874
Q ss_pred hh--------hhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc----C------cH----HHHHHHhCCC
Q 008127 483 LH--------VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G------SI----DPLLEEADID 540 (577)
Q Consensus 483 ~~--------~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~------~~----~~~~~~~D~d 540 (577)
.. ......... ...++.+|+.+|+|++|+|+.+||+.++... | ++ ..+|+.+|.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~---~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~ 160 (272)
T 2be4_A 84 LPQEENFLLIFRREAPLDN---SVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKN 160 (272)
T ss_dssp SCHHHHHHHHHHHHSCCCC---HHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSS
T ss_pred hhhhHHHHHHHhhccCccc---HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccC
Confidence 32 111111111 2367889999999999999999999988754 3 23 4599999999
Q ss_pred CCCcccHHHHHHHHhh
Q 008127 541 KDGRISLSEFRRLLRT 556 (577)
Q Consensus 541 ~dG~i~~~EF~~~l~~ 556 (577)
+||.|+|+||+.++..
T Consensus 161 ~dg~i~~~ef~~~~~~ 176 (272)
T 2be4_A 161 KDGRLDLNDLARILAL 176 (272)
T ss_dssp CSSEEEHHHHGGGSCC
T ss_pred CCCcCcHHHHHHHHhh
Confidence 9999999999988754
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.67 E-value=7.6e-17 Score=178.43 Aligned_cols=131 Identities=19% Similarity=0.283 Sum_probs=117.1
Q ss_pred ccchHH-HhhhccccccccCCCCCCCCHHHHHHHHHhhC-------CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 412 TLDDEE-LADLRDQFDAIDVDKNGSISLEEMRQALAKDL-------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 412 ~~~~~~-~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~-------~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
.+++++ .++++++|+.+| |+||.|+.+||..+|...+ +..++.++++.|++.+|.|++|.|+|+||+.++.
T Consensus 524 ~ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~ 602 (714)
T 3bow_A 524 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT 602 (714)
T ss_dssp CCSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 367777 889999999999 9999999999999996532 6789999999999999999999999999998765
Q ss_pred hhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 484 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.. ..++.+|+.||+|++|+|+.+||+.++...| +++.++..+| |+||.|+|+||+.+|..
T Consensus 603 ~~------------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~ 668 (714)
T 3bow_A 603 KI------------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR 668 (714)
T ss_dssp HH------------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHH
T ss_pred HH------------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence 32 2577899999999999999999999998776 4899999999 99999999999998864
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-15 Score=127.35 Aligned_cols=97 Identities=27% Similarity=0.377 Sum_probs=84.3
Q ss_pred hCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc
Q 008127 448 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 527 (577)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 527 (577)
++|. +++.+++.+++.+| ++|.|+|+||+.++... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 slG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (108)
T 2pvb_A 2 SFAG-LKDADVAAALAACS--AADSFKHKEFFAKVGLA-----SKS---LDDVKKAFYVIDQDKSGFIEEDELKLFLQNF 70 (108)
T ss_dssp CCTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG-----GSC---HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred CcCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC-----hhH---HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 4788 99999999999999 89999999999876421 111 2468889999999999999999999999877
Q ss_pred ---C------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 528 ---G------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 528 ---~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
+ ++..+|+.+|.|+||.|+|+||+.+|.
T Consensus 71 ~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 71 SPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred hccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 4 489999999999999999999999886
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.62 E-value=8e-16 Score=128.58 Aligned_cols=97 Identities=22% Similarity=0.365 Sum_probs=84.5
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc-
Q 008127 449 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 527 (577)
Q Consensus 449 ~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 527 (577)
++..+++++++.+++.+| ++|.|+|+||+.++... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 3 l~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~ 72 (109)
T 3fs7_A 3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGLS-----SKT---PDQIKKVFGILDQDKSGFIEEEELQLFLKNFS 72 (109)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT-----TCC---HHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTC
T ss_pred ccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhcC-----CCc---HHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHh
Confidence 567889999999999999 79999999999876531 111 2468889999999999999999999999877
Q ss_pred --C------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 528 --G------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 528 --~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
+ +++.+|+.+|.|+||.|+|+||+.+|+
T Consensus 73 ~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 73 SSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp TTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred cccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 4 489999999999999999999999986
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-16 Score=180.15 Aligned_cols=142 Identities=20% Similarity=0.325 Sum_probs=121.8
Q ss_pred HhhccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhh
Q 008127 407 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 486 (577)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~ 486 (577)
..+...++.+++.+++.+|..||.|++|+|+.+||..+|. .+|..+++.+++.+|..+|.|+||.|+|+||+.++....
T Consensus 713 ~~~~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~-~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 791 (863)
T 1sjj_A 713 TRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLI-SMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRET 791 (863)
T ss_dssp HCCCCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHH-HHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHS
T ss_pred HhhccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence 3445677888899999999999999999999999999995 589999999999999999999999999999998775432
Q ss_pred hhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCC-----CCCcccHHHHHHHHhh
Q 008127 487 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADID-----KDGRISLSEFRRLLRT 556 (577)
Q Consensus 487 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d-----~dG~i~~~EF~~~l~~ 556 (577)
.. ... ...+..+|+.| .|++|+|+.+||+.++. ..+++.+|..+|.+ +||.|+|+||+.+|.+
T Consensus 792 ~~--~~~---~~~l~~aF~~~-~d~~G~Is~~El~~~l~-~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~ 859 (863)
T 1sjj_A 792 AD--TDT---ADQVMASFKIL-AGDKNYITVDELRRELP-PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYG 859 (863)
T ss_dssp TT--CSS---SHHHHHHHHGG-GTSSSEEEHHHHHHHSC-HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSC
T ss_pred cC--CCC---HHHHHHHHHHH-hCCCCcCcHHHHHHHCC-HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhc
Confidence 11 111 13578899999 89999999999999996 44689999999987 7999999999999975
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.4e-16 Score=172.35 Aligned_cols=129 Identities=14% Similarity=0.161 Sum_probs=58.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
..++++|+.||.|+||+|+.+||..+|. .+|..+++++++.+|+.+|.|++|.|+|+||+.++.... . . .
T Consensus 11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~-~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~---~--~----~ 80 (624)
T 1djx_A 11 HWIHSCLRKADKNKDNKMNFKELKDFLK-ELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLT---Q--R----A 80 (624)
T ss_dssp ----------------------------------------------------------CTTHHHHHHT---C--C----H
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhc---c--H----H
Confidence 3689999999999999999999999994 589999999999999999999999999999998775431 1 1 2
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCc-C-------cHHHHHHHhCCC----CCCcccHHHHHHHHhhcc
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLK-G-------SIDPLLEEADID----KDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~-------~~~~~~~~~D~d----~dG~i~~~EF~~~l~~~~ 558 (577)
.++++|+.||++ +|+|+.+||+.+|... + +++++|+.+|.| +||.|+|+||+.+|....
T Consensus 81 el~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~~ 151 (624)
T 1djx_A 81 EIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD 151 (624)
T ss_dssp HHHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHSTT
T ss_pred HHHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCcc
Confidence 578899999985 9999999999998743 2 489999999998 799999999999998643
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=127.48 Aligned_cols=98 Identities=24% Similarity=0.376 Sum_probs=85.0
Q ss_pred hCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc
Q 008127 448 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 527 (577)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 527 (577)
++|..+++.+++.+++.+| ++|.|+|+||+.++... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 slg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 71 (109)
T 1bu3_A 2 AFSGILADADVAAALKACE--AADSFNYKAFFAKVGLT-----AKS---ADDIKKAFFVIDQDKSGFIEEDELKLFLQVF 71 (109)
T ss_dssp CCSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG-----GSC---HHHHHHHHHHHCTTCSSSEEHHHHHTHHHHH
T ss_pred cccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC-----hhh---HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 4789999999999999999 89999999999876421 111 2468889999999999999999999988766
Q ss_pred ---C------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 528 ---G------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 528 ---~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
+ ++..+++.+|.|+||.|+|+||+.+|.
T Consensus 72 ~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 72 SAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp STTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred cccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 4 489999999999999999999999885
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.61 E-value=9.4e-16 Score=128.35 Aligned_cols=99 Identities=28% Similarity=0.408 Sum_probs=85.1
Q ss_pred hCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc
Q 008127 448 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 527 (577)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 527 (577)
++|..+++.+++.+++.+| ++|.|+|+||+.++.. . ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~----~-~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 71 (110)
T 1pva_A 2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGL----K-AMS---ANDVKKVFKAIDADASGFIEEEELKFVLKSF 71 (110)
T ss_dssp CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC----T-TSC---HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc----C-cch---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4577889999999999999 8999999999987632 1 111 2468889999999999999999999999876
Q ss_pred ---C------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 528 ---G------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 528 ---~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
+ ++..+++.+|.|+||.|+|+||+.+|..
T Consensus 72 ~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 72 AADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp CTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred hhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 4 4899999999999999999999999875
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-15 Score=127.12 Aligned_cols=98 Identities=27% Similarity=0.397 Sum_probs=83.9
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc-
Q 008127 449 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 527 (577)
Q Consensus 449 ~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 527 (577)
+|..+++++++.+++.+|. +|.|+|+||+.++... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 l~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~ 71 (109)
T 5pal_A 2 MTKVLKADDINKAISAFKD--PGTFDYKRFFHLVGLK-----GKT---DAQVKEVFEILDKDQSGFIEEEELKGVLKGFS 71 (109)
T ss_dssp GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTCT-----TCC---HHHHHHHHHHHCTTCSSEECHHHHHTHHHHHC
T ss_pred CCCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhhc-----cCc---HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 4556889999999999997 8999999999876431 111 2468889999999999999999999988766
Q ss_pred --C------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 528 --G------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 528 --~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
+ ++..+|+.+|.|+||.|+|+||+.+|+.
T Consensus 72 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 72 AHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp TTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 4 4899999999999999999999999975
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-15 Score=127.59 Aligned_cols=98 Identities=22% Similarity=0.299 Sum_probs=83.6
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc-
Q 008127 449 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 527 (577)
Q Consensus 449 ~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 527 (577)
+|..+++.+++.+++.+| ++|.|+|+||+.++... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 lg~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~ 71 (109)
T 1rwy_A 2 MTDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGLK-----KKS---ADDVKKVFHILDKDKSGFIEEDELGSILKGFS 71 (109)
T ss_dssp HHHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTGG-----GSC---HHHHHHHHHHHSTTCSSEECHHHHHTHHHHHC
T ss_pred CCCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhcC-----cch---HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHh
Confidence 456789999999999999 89999999999876321 111 2468889999999999999999999988766
Q ss_pred --C------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 528 --G------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 528 --~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
+ +++.+++.+|.|+||.|+|+||+.+|..
T Consensus 72 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 72 SDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp TTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred ccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 3 4899999999999999999999999864
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.7e-15 Score=125.10 Aligned_cols=97 Identities=21% Similarity=0.315 Sum_probs=83.0
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc-
Q 008127 449 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 527 (577)
Q Consensus 449 ~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 527 (577)
++..+++.+++.+++.+| ++|.|+|+||+.++... . .. ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~----~-~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~ 71 (108)
T 1rro_A 2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGLS----K-MS---ASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQ 71 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSGG----G-SC---HHHHHHHHHHHCTTCSSEECTHHHHTGGGGTC
T ss_pred ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhcC----c-cc---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHh
Confidence 456789999999999998 89999999999876321 1 11 2468889999999999999999999999876
Q ss_pred --C------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 528 --G------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 528 --~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
+ ++..+|+.+|.|+||.|+|+||+.+|.
T Consensus 72 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 72 SDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp TTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred hccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 3 489999999999999999999999885
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=4e-15 Score=140.21 Aligned_cols=152 Identities=16% Similarity=0.223 Sum_probs=109.3
Q ss_pred hHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc--ccc
Q 008127 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE--EHD 492 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~--~~~ 492 (577)
......+..+|..+|.|++|.|+.+||..++.. ++......++..+|+.+|.|++|.|+++||..++....... ...
T Consensus 53 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~-~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~ 131 (211)
T 2ggz_A 53 QKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNL-IMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTL 131 (211)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-HSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSC
T ss_pred cchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHH-hccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccc
Confidence 344566899999999999999999999999954 56677788999999999999999999999998776432111 111
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcccHHHHHHHHhhcccCC---CCCCCCCC
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISS---RNVPPSPS 569 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~~~~---~~~~~~~~ 569 (577)
.. ...+..+|+.+|.|++|.|+.+||..++....++.++|.. .++|+||+.+|....... ...+|++.
T Consensus 132 ~~--~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~-------~~d~~~f~~~~~~~~~~~~~~~~~~~~~~ 202 (211)
T 2ggz_A 132 SP--EEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYK-------SFDFSNVLRVICNGKQPDMETDSSKSPDK 202 (211)
T ss_dssp TH--HHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTTTTHHHHHH-------HSCTTHHHHHHHHHC--------------
T ss_pred cH--HHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCHHHHHHHhc-------cCCHHHHHHHHhcCCCCchhhcCCCCCcc
Confidence 11 2357789999999999999999999999988889999883 344999999998755322 22224445
Q ss_pred CCCCCCC
Q 008127 570 GHRNPRK 576 (577)
Q Consensus 570 ~~~~~~~ 576 (577)
+-.||+|
T Consensus 203 ~~~~~~~ 209 (211)
T 2ggz_A 203 AGLGKVK 209 (211)
T ss_dssp -------
T ss_pred ccccccc
Confidence 5557766
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.7e-15 Score=172.92 Aligned_cols=129 Identities=21% Similarity=0.339 Sum_probs=100.7
Q ss_pred cchHH-HhhhccccccccCCCCCCCCHHHHHHHHHhhCCC--------CccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 413 LDDEE-LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--------KLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 413 ~~~~~-~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~--------~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
+++++ +++++++|..+| |++|.|+.+||..+|.. ++. .++..+++.+++.+|.|++|.|+|+||+.++.
T Consensus 527 l~~~e~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~-~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~ 604 (900)
T 1qxp_A 527 LSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNR-IISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWN 604 (900)
T ss_dssp --------------CCCC-CSSSSCCCSCTTTTTCC----------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHH
T ss_pred CCcchHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHH-hhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 33343 789999999999 99999999999999944 554 78899999999999999999999999998765
Q ss_pred hhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 484 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.. ..++.+|+.||+|++|+|+.+||+.++...| +++.++..+| |+||.|+|+||+.++..
T Consensus 605 ~~------------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~ 670 (900)
T 1qxp_A 605 RI------------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR 670 (900)
T ss_dssp HH------------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHH
T ss_pred HH------------HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence 32 3678899999999999999999999998776 4899999999 99999999999988864
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-14 Score=134.80 Aligned_cols=125 Identities=20% Similarity=0.208 Sum_probs=106.4
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++..... ... ..
T Consensus 63 ~~~~~l~~~~D~d~dG~I~~~EF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~---~~~---~~ 129 (191)
T 1y1x_A 63 ATTEKLLHMYDKNHSGEITFDEFKDLHHF-------ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGY---QVS---EQ 129 (191)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSC---CCC---HH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHH-------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCC---CCC---HH
Confidence 35667789999999999999999998853 368899999999999999999999987754311 111 23
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCc--ccHHHHHHHHhh
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGR--ISLSEFRRLLRT 556 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~--i~~~EF~~~l~~ 556 (577)
.+..+|+.+|.|++|.|+.+||..++.....+..+|+.+|.|+||. ++|+||+.++..
T Consensus 130 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~~ 189 (191)
T 1y1x_A 130 TFQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFTFDTFIGGSVS 189 (191)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHHHHHHHHHHHHHhCcCCCceEEeeHHHHHHHHHh
Confidence 5778999999999999999999999987778899999999999999 789999998764
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.56 E-value=2.6e-15 Score=139.09 Aligned_cols=124 Identities=21% Similarity=0.300 Sum_probs=96.4
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhh-------hccc
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ-------LEEH 491 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~-------~~~~ 491 (577)
..+..+|..+|.|++|.|+..||..++.. ++...++.++..+|+.+|.|++|.|+++||..++..... +...
T Consensus 63 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~ 141 (193)
T 1bjf_A 63 KFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPED 141 (193)
T ss_dssp HHHHHHHHHHCSSCSSEEEHHHHHHHHHH-HTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGG
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH-HcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcc
Confidence 45788999999999999999999999954 666778889999999999999999999999987754321 1111
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcc
Q 008127 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI 545 (577)
Q Consensus 492 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i 545 (577)
+ ......+..+|+.+|+|++|.|+.+||..++....++.++| .+|.|+||.|
T Consensus 142 ~-~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~-~~D~~~dG~i 193 (193)
T 1bjf_A 142 E-STPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLL-QCDPSSAGQF 193 (193)
T ss_dssp G-SSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCTHHHHTT-CC--------
T ss_pred c-ccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcCHHHHHHh-ccCCCCCCCC
Confidence 1 01234578899999999999999999999998888899999 9999999986
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.4e-15 Score=126.80 Aligned_cols=98 Identities=23% Similarity=0.336 Sum_probs=83.3
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc-
Q 008127 449 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 527 (577)
Q Consensus 449 ~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 527 (577)
++..+++.+++.+++.+| ++|.|+|+||+.++... .... ..++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~----~~~~----~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~ 71 (108)
T 2kyc_A 2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGMS----KKSS----SQLKEIFRILDNDQSGFIEEDELKYFLQRFE 71 (108)
T ss_dssp TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT----TCCS----SSHHHHCSSSCSCCSSCCCGGGTTTSHHHHS
T ss_pred ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC----cccH----HHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh
Confidence 677899999999999999 89999999999876321 1111 257789999999999999999999988765
Q ss_pred --C------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 528 --G------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 528 --~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
+ ++..+++.+|.|+||.|+|+||+.+|++
T Consensus 72 ~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 108 (108)
T 2kyc_A 72 SGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQS 108 (108)
T ss_dssp SSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHHC
T ss_pred hccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHhC
Confidence 3 5899999999999999999999999863
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.54 E-value=7.7e-15 Score=127.68 Aligned_cols=97 Identities=20% Similarity=0.296 Sum_probs=60.4
Q ss_pred HHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-------
Q 008127 456 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------- 528 (577)
Q Consensus 456 ~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------- 528 (577)
..++++|+.+|.|++|.|+|+||+.++..... . ......++.+|+.||+|++|+|+.+||+.++...|
T Consensus 3 p~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~--~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~ 77 (135)
T 3h4s_E 3 PTEKSMLLETTSTTKMETKYEDMLPVMAEKMD--V---EEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKE 77 (135)
T ss_dssp ----------------CCCC-----------C--H---HHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHH
T ss_pred hhHHHHHHHHcCCCCCcEeHHHHHHHHHHHcc--c---cchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHH
Confidence 35678999999999999999999987653211 1 11234788999999999999999999999998776
Q ss_pred cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 529 SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 529 ~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
+++.+|+.+|.|+||.|+|+||+.+|...
T Consensus 78 e~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 78 DAQGMVREGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHHHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence 38999999999999999999999999764
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.53 E-value=2.4e-14 Score=130.08 Aligned_cols=124 Identities=15% Similarity=0.236 Sum_probs=104.0
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
.+..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++..... ... ...
T Consensus 45 ~~~~l~~~~D~~~~g~i~~~ef~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~---~~~---~~~ 111 (172)
T 2znd_A 45 TVRSIISMFDRENKAGVNFSEFTGVWKY-------ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGY---RLS---DQF 111 (172)
T ss_dssp HHHHHHHHHCSSSSSEECHHHHHHHHHH-------HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC---CCC---HHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCccCHHHHHHHHHHcCC---CCC---HHH
Confidence 4566788899999999999999998853 367899999999999999999999987754321 111 135
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCccc--HHHHHHHHhh
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRIS--LSEFRRLLRT 556 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~--~~EF~~~l~~ 556 (577)
+..+|+.+|.|++|.|+.+||..++.....+..+|+.+|.|+||.|+ |+||+.++..
T Consensus 112 ~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~ 170 (172)
T 2znd_A 112 HDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 170 (172)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence 77899999999999999999999888777789999999999999995 8999988764
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.52 E-value=3.6e-14 Score=133.06 Aligned_cols=123 Identities=18% Similarity=0.247 Sum_probs=103.7
Q ss_pred cccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC-CCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHh
Q 008127 427 AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 505 (577)
Q Consensus 427 ~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d-~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~ 505 (577)
.++.+++|.|+.+||..++. .++ ++..++..+|..+|.+ ++|.|+++||..++....... .. ...+..+|+
T Consensus 7 ~mg~~~~g~l~~~el~~~~~-~~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~--~~---~~~~~~~f~ 78 (207)
T 2d8n_A 7 GMGNSKSGALSKEILEELQL-NTK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDT--DP---KAYAQHVFR 78 (207)
T ss_dssp -CTTCCTTCCCHHHHHHHHH-HSS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTS--CC---HHHHHHHHH
T ss_pred hhccccCCCCCHHHHHHHHH-HcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCC--Cc---HHHHHHHHH
Confidence 37899999999999999994 466 5889999999999999 799999999998776432111 11 236788999
Q ss_pred hcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 506 KFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 506 ~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
.+|.|++|.|+.+||..++...+ ++..+|+.+|.|+||.|+++||..++...
T Consensus 79 ~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~ 136 (207)
T 2d8n_A 79 SFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAI 136 (207)
T ss_dssp HHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence 99999999999999998886544 59999999999999999999999999864
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=4.3e-14 Score=128.46 Aligned_cols=125 Identities=14% Similarity=0.151 Sum_probs=101.7
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh-cccccHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL-EEHDSEKWH 497 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~-~~~~~~~~~ 497 (577)
.+++.+|..+|.|++|.|+.+||..++.. ..++..+|+.+| |++|.|+.+||..++...... -.... .
T Consensus 46 ~~~~~l~~~~D~d~~G~I~f~EF~~~~~~-------~~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~---~ 114 (174)
T 2i7a_A 46 DECRSLVALMELKVNGRLDQEEFARLWKR-------LVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFIS---R 114 (174)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHH-------HHHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCC---H
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCC---H
Confidence 35667888999999999999999988754 257899999999 999999999999877543110 01111 1
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCC-cccHHHHHHHHh
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDG-RISLSEFRRLLR 555 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG-~i~~~EF~~~l~ 555 (577)
..+..+++.+| |++|.|+.+||..++.....+..+|+.+|.|++| .++++||+.++.
T Consensus 115 ~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~~~~~~~F~~~D~d~~GI~~~~~Ef~~~~~ 172 (174)
T 2i7a_A 115 ELLHLVTLRYS-DSVGRVSFPSLVCFLMRLEAMAKTFRNLSKDGKGLYLTEMEWMSLVM 172 (174)
T ss_dssp HHHHHHHHHHS-CTTSEECHHHHHHHHHHHHHHHHHHHHHCSSSSCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCceecHHHHHHHHH
Confidence 35677899999 9999999999999887777789999999999999 459999998764
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.48 E-value=6.4e-14 Score=132.72 Aligned_cols=124 Identities=12% Similarity=0.059 Sum_probs=104.0
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++..... .... .
T Consensus 87 ~~~~~l~~~~D~d~dg~I~~~EF~~~~~~-------~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~---~~~~---~ 153 (220)
T 3sjs_A 87 QTALRMMRIFDTDFNGHISFYEFMAMYKF-------MELAYNLFVMNARARSGTLEPHEILPALQQLGF---YINQ---R 153 (220)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHHHHCCSSTTEECHHHHHHHHHHHTC---CCCH---H
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCC---CCCH---H
Confidence 35677888899999999999999999854 267999999999999999999999987764321 1111 2
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHh-CCCCCC------cccHHHHHHHHhh
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEA-DIDKDG------RISLSEFRRLLRT 556 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~-D~d~dG------~i~~~EF~~~l~~ 556 (577)
.+..+|+.+| |+||.|+.+||..++.....+.++|+.+ |.+++| .|+|+||+.++..
T Consensus 154 ~~~~l~~~~d-d~dg~I~~~eF~~~~~~l~~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~ 217 (220)
T 3sjs_A 154 TSLLLHRLFA-RGMAFCDLNCWIAICAFAAQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS 217 (220)
T ss_dssp HHHHHHHHHC---CCSEEHHHHHHHHHHHHHHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence 5778999999 9999999999999998888899999999 999999 8999999998865
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.4e-13 Score=156.99 Aligned_cols=136 Identities=22% Similarity=0.314 Sum_probs=105.4
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc------c-
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE------E- 490 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~------~- 490 (577)
+++++.+|+.+|.|++|+|+.+||..+|. .+|..+++++++.++..+| |++|.|+|+||+.++.....+. +
T Consensus 606 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~-~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~~~D~ 683 (900)
T 1qxp_A 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIE-AAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDP 683 (900)
T ss_dssp HHHHHHHHGGGCTTCCSCCBHHHHHHHHH-HTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHhhCCCCCCeECHHHHHHHHH-HhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHhhCC
Confidence 46789999999999999999999999995 5899999999999999999 9999999999998765321100 0
Q ss_pred -c---------------------------------------ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC--
Q 008127 491 -H---------------------------------------DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 528 (577)
Q Consensus 491 -~---------------------------------------~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-- 528 (577)
. ...+....++.+|+.+|.+ +|.|+.+||+.++...+
T Consensus 684 d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~El~~~L~~~~~~ 762 (900)
T 1qxp_A 684 ENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSATELMNILNKVVTR 762 (900)
T ss_dssp SCCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHHHHTTTSCC----
T ss_pred CCCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHhccc
Confidence 0 0011233567788888887 88899999999987643
Q ss_pred ------------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 529 ------------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 529 ------------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.++.+++.+|.|+||+|+|+||+.++..
T Consensus 763 ~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~ 802 (900)
T 1qxp_A 763 HPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN 802 (900)
T ss_dssp CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHH
T ss_pred ccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHH
Confidence 3789999999999999999999999864
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=99.46 E-value=3.9e-14 Score=156.87 Aligned_cols=125 Identities=14% Similarity=0.182 Sum_probs=95.1
Q ss_pred Hhhhccccc--cccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcC-------CCCcceehhhHHHHHhhhhhh
Q 008127 418 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC-------NTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 418 ~~~l~~~F~--~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~-------d~dg~i~f~EF~~~~~~~~~~ 488 (577)
...++++|. .||+|+||+|+..||..+|. . .+.+++.+++.+|. +++|.|+|+||+.++....
T Consensus 145 ~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~-~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~-- 216 (799)
T 2zkm_X 145 STFLDKILVKLKMQLNSEGKIPVKNFFQMFP-A-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC-- 216 (799)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHHSC-S-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS--
T ss_pred HHHHHHHhHHhccCCCCCCeECHHHHHHHHh-h-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc--
Confidence 456889999 89999999999999999883 2 46899999999985 8899999999998876432
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc-C---------------cHHHHHHHhCCC----CCCcccHH
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-G---------------SIDPLLEEADID----KDGRISLS 548 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~---------------~~~~~~~~~D~d----~dG~i~~~ 548 (577)
. . ..++++|+.||+|++|+|+.+||+.+|... | +++++|+.+|.| +||.|+|+
T Consensus 217 -~--r----~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~e 289 (799)
T 2zkm_X 217 -P--R----PEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPE 289 (799)
T ss_dssp -C--C----HHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHH
T ss_pred -C--H----HHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchh
Confidence 1 1 257889999999999999999999988754 2 478999999999 89999999
Q ss_pred HHHHHHhhc
Q 008127 549 EFRRLLRTA 557 (577)
Q Consensus 549 EF~~~l~~~ 557 (577)
||+.+|...
T Consensus 290 eF~~~L~S~ 298 (799)
T 2zkm_X 290 GMVWFLCGP 298 (799)
T ss_dssp HHHHHHHST
T ss_pred hhhhcccCc
Confidence 999999864
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-13 Score=124.40 Aligned_cols=122 Identities=17% Similarity=0.233 Sum_probs=100.9
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
..+..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++..... .... .
T Consensus 47 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~---~~~~---~ 113 (173)
T 1alv_A 47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNN-------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGF---HLNE---H 113 (173)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTC---CCCH---H
T ss_pred HHHHHHHHHHcCCCCCccCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCC---CCCH---H
Confidence 45677888999999999999999998853 368899999999999999999999987754321 1111 3
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
.+..+|+.+| |++|.|+.+||..++.....+..+|+.+|.|+||.|+.+ |.++|.
T Consensus 114 ~~~~~~~~~d-d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~-~~~~l~ 168 (173)
T 1alv_A 114 LYSMIIRRYS-DEGGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVN-IQEWLQ 168 (173)
T ss_dssp HHHHHHHHHT-CSSSCBCHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEE-HHHHHH
T ss_pred HHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeecHh-HHHHHH
Confidence 5677899999 999999999999988877789999999999999999866 655554
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.5e-13 Score=115.37 Aligned_cols=107 Identities=17% Similarity=0.289 Sum_probs=75.0
Q ss_pred hHHHhhhccccccccCCCCCCCCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
+..++.++.+|+.||.| +|+|+..||+.+|... ++...++.+++.||+.+|.|+||.|+|+||+.++.....
T Consensus 11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~--- 86 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTI--- 86 (121)
T ss_dssp HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHH---
Confidence 45678999999999998 8999999999999542 577788999999999999999999999999988764321
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCC
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKD 542 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~d 542 (577)
...+.|....+..+++... ...+.++|+++|.|||
T Consensus 87 --------~~he~f~~~~k~~~~~~~~---------d~~~~e~~~~~d~~gd 121 (121)
T 4drw_A 87 --------ACNDYFVVHMKQENLYFQG---------DSTVHEILSKLSLEGD 121 (121)
T ss_dssp --------HHHHHHTTSCC------------------CCHHHHHHHCCC---
T ss_pred --------HHHHHHHHHHHHhccCCCC---------chHHHHHHHHhcccCC
Confidence 1123455555444444433 2236777777777765
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=1e-13 Score=113.32 Aligned_cols=71 Identities=35% Similarity=0.578 Sum_probs=66.4
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHH
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~ 482 (577)
..++++++++++++|+.||.|++|+|+.+||+.+|. .+|..+++.+++.+|+.+|.|+||.|+|+||+.+|
T Consensus 28 ~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~-~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 28 VDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMR-SLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp CCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHH-HHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 457888999999999999999999999999999995 58999999999999999999999999999999765
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.38 E-value=7.1e-13 Score=122.22 Aligned_cols=119 Identities=26% Similarity=0.335 Sum_probs=97.6
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc------ccc
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HDS 493 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~------~~~ 493 (577)
.+..+|..+|.|++|.|+.+||..++.. ++...++.++..+|+.+|.|++|.|+++||..++........ ...
T Consensus 64 ~~~~~f~~~D~d~~G~i~~~ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~ 142 (190)
T 1fpw_A 64 FANHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDE 142 (190)
T ss_dssp HHHHHHHTCCSSCSSEECHHHHHHHHHH-HSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCC
T ss_pred HHHHHHHHHCCCCCCcEeHHHHHHHHHH-HccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCccccc
Confidence 4788999999999999999999999954 677778899999999999999999999999987765321100 000
Q ss_pred HHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCC
Q 008127 494 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADI 539 (577)
Q Consensus 494 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~ 539 (577)
......+..+|+.+|.|++|.|+.+||..++.....+.++|..+|.
T Consensus 143 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~d~ 188 (190)
T 1fpw_A 143 ATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLYDG 188 (190)
T ss_dssp CCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTTHHHHHHHHHC
T ss_pred chHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHHhhccc
Confidence 1123467889999999999999999999999988888888887764
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.38 E-value=1e-12 Score=121.20 Aligned_cols=118 Identities=17% Similarity=0.294 Sum_probs=98.7
Q ss_pred CCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC-CCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCC
Q 008127 431 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDI 509 (577)
Q Consensus 431 d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d-~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~ 509 (577)
+.+|.|+.+|+..+... ++ ++..++..+|..+|.| ++|.|+++||..++....... .. ...+..+|+.+|.
T Consensus 3 ~~~~~l~~~el~~~~~~-~~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~--~~---~~~~~~~f~~~D~ 74 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRS-TR--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFG--DP---SAFAEYVFNVFDA 74 (190)
T ss_dssp CSSCCSCHHHHHHHHHH-HC--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCS--CH---HHHHHHHHHHHCS
T ss_pred cccccCCHHHHHHHHHh-cC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCC--Cc---cHHHHHHHHHhcC
Confidence 45789999999998844 44 5788999999999999 899999999998775432111 11 2357789999999
Q ss_pred CCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 510 DRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 510 d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
|++|.|+.+||..++...+ ++..+|+.+|.|+||.|+++||..++..
T Consensus 75 d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 75 DKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp SSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred CCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 9999999999999887665 4888999999999999999999999876
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.38 E-value=7.9e-13 Score=119.34 Aligned_cols=120 Identities=16% Similarity=0.199 Sum_probs=97.4
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++..... ... ..
T Consensus 42 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~---~~~---~~ 108 (167)
T 1gjy_A 42 ETCRLMVSMLDRDMSGTMGFNEFKELWAV-------LNGWRQHFISFDSDRSGTVDPQELQKALTTMGF---RLN---PQ 108 (167)
T ss_dssp HHHHHHHHHHCTTCCSCBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSEECHHHHHHHHHTTTC---CCC---HH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC---CCC---HH
Confidence 35677888999999999999999998854 368899999999999999999999987754211 111 13
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcccHH--HHHHH
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLS--EFRRL 553 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~--EF~~~ 553 (577)
.+..+|+.+ |++|.|+.+||..++.....+..+|+.+|.|++|.|+.+ +|+.+
T Consensus 109 ~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~~~~~l~~ 163 (167)
T 1gjy_A 109 TVNSIAKRY--STSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQC 163 (167)
T ss_dssp HHHHHHHHT--CBTTBEEHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred HHHHHHHHh--CcCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCeeEEeeHHHHHHH
Confidence 566788888 899999999999988877788999999999999999965 55443
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.8e-12 Score=126.32 Aligned_cols=140 Identities=17% Similarity=0.145 Sum_probs=108.6
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAM 176 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~ 176 (577)
.|++...+|.|+.+.||++.. .+..+++|+...... .....+.+|+.+++.|..+..++++++++...+..|+||
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~---~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYK---GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGT---TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred cceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccC---CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 588888999999999999963 468999998864211 112358899999999976788899999999899999999
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh------------------------
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL------------------------ 232 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~------------------------ 232 (577)
||++|.+|.+.+ .+......++.++..+|..||+
T Consensus 90 e~i~G~~l~~~~----------------------~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (263)
T 3tm0_A 90 SEADGVLCSEEY----------------------EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLN 147 (263)
T ss_dssp ECCSSEEHHHHC----------------------CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHH
T ss_pred EecCCeehhhcc----------------------CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHh
Confidence 999998886531 0112234677888888888887
Q ss_pred -----------------------------------cCceeccCCCCcEEeecCCCCCCeeEEecCCCcc
Q 008127 233 -----------------------------------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266 (577)
Q Consensus 233 -----------------------------------~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~ 266 (577)
..++|+|++|.|||++. +..+.|+||+.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~---~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 148 NDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKD---GKVSGFIDLGRSGR 213 (263)
T ss_dssp TTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEET---TEEEEECCCTTCEE
T ss_pred ccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEEC---CcEEEEEEchhccc
Confidence 45899999999999972 34557999997753
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-12 Score=121.27 Aligned_cols=120 Identities=18% Similarity=0.257 Sum_probs=97.0
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc---c
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE---E 490 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~---~ 490 (577)
.......+..+|..+|.|++|.|+..||..++.. ++...+..++..+|+.+|.|++|.|+++||..++....... .
T Consensus 47 ~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~ 125 (198)
T 2r2i_A 47 SPSANKYVEQMFETFDFNKDGYIDFMEYVAALSL-VLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNE 125 (198)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH-HSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSS
T ss_pred CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-HccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCc
Confidence 3444556899999999999999999999999954 66677888999999999999999999999998876543211 1
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHH
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 536 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~ 536 (577)
.... ...+..+|+.+|.|++|.|+.+||..++....++.+++..
T Consensus 126 ~~~~--~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~ 169 (198)
T 2r2i_A 126 AMTA--EEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTR 169 (198)
T ss_dssp CCCH--HHHHHHHHHHHCTTCSSEECHHHHHHHHTTCHHHHHHHHS
T ss_pred hhhH--HHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCHHHHHHHhc
Confidence 1111 2347789999999999999999999999877777777763
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.37 E-value=8.1e-13 Score=118.94 Aligned_cols=122 Identities=14% Similarity=0.188 Sum_probs=98.7
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++..... .... .
T Consensus 40 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~---~~~~---~ 106 (165)
T 1k94_A 40 ETCRIMIAMLDRDHTGKMGFNAFKELWAA-------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGY---RLSP---Q 106 (165)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTC---CCCH---H
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhCCCCCceECHHHHHHHHHHhCC---CCCH---H
Confidence 35677888899999999999999998854 368899999999999999999999887754321 1111 2
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.+..+|+.+ |++|.|+.+||..++.....+..+|+.+|.|++|.|+.+ |.++|..
T Consensus 107 ~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~-~~~~l~~ 161 (165)
T 1k94_A 107 TLTTIVKRY--SKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFI-YDDFLQG 161 (165)
T ss_dssp HHHHHHHHH--CBTTBCBHHHHHHHHHHHHHHHHHHHTTCTTCCSEEEEE-HHHHHHH
T ss_pred HHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeee-HHHHHHH
Confidence 566778888 899999999999988877778999999999999999776 6666643
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.37 E-value=3.1e-13 Score=118.62 Aligned_cols=95 Identities=18% Similarity=0.205 Sum_probs=46.7
Q ss_pred HHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----------
Q 008127 459 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---------- 528 (577)
Q Consensus 459 ~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~---------- 528 (577)
..+|..+|.|+||.|+|+||+..+.......... ......++.+|+.||+|++|+|+.+||+.++...+
T Consensus 30 ~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~-~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~ 108 (143)
T 3a4u_B 30 FSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAE-MSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL 108 (143)
T ss_dssp ---------------------------------C-CCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccc-cCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence 3466667777777777777765543321100000 01123677899999999999999999999987651
Q ss_pred ----cH----HHHHHHhCCCCCCcccHHHHHHHH
Q 008127 529 ----SI----DPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 529 ----~~----~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
++ +.+|+.+|.|+||+|+|+||+.+|
T Consensus 109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 24 455599999999999999999876
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-12 Score=121.36 Aligned_cols=121 Identities=16% Similarity=0.207 Sum_probs=96.9
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++..... .... .
T Consensus 73 ~~~~~l~~~~D~d~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~---~~~~---~ 139 (198)
T 1juo_A 73 ETCRLMVSMLDRDMSGTMGFNEFKELWAV-------LNGWRQHFISFDTDRSGTVDPQELQKALTTMGF---RLSP---Q 139 (198)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHH-------HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTC---CCCH---H
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHH-------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCC---CCCH---H
Confidence 35667788899999999999999998854 368889999999999999999999887654321 1111 2
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcccH--HHHHHHH
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISL--SEFRRLL 554 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~--~EF~~~l 554 (577)
.+..+|+.+ |++|.|+.+||..++.....+..+|+.+|.|+||.|+. .+|+.++
T Consensus 140 ~~~~l~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~is~~~~~~l~~~ 195 (198)
T 1juo_A 140 AVNSIAKRY--STNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCV 195 (198)
T ss_dssp HHHHHHHHT--CSSSSEEHHHHHHHHHHHHHHHHHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeecHHHHHHHH
Confidence 566788888 89999999999998887778899999999999999887 6666554
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.2e-12 Score=115.82 Aligned_cols=89 Identities=12% Similarity=0.263 Sum_probs=70.7
Q ss_pred hHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccH
Q 008127 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 494 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~ 494 (577)
.++.++++.+|..||.|++|+|+.+||..+|. .+|..+++.+++.+|..+|.|++|.|+|+||+.++... .
T Consensus 46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~---~----- 116 (150)
T 2jjz_A 46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMME-KLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK---R----- 116 (150)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHH-HTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS---S-----
T ss_pred HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHH-HcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh---H-----
Confidence 46778999999999999999999999999995 58999999999999999999999999999999877532 1
Q ss_pred HHHHHHHHHHhhcCCCCCCcc
Q 008127 495 KWHLRSQAAFEKFDIDRDGFI 515 (577)
Q Consensus 495 ~~~~~~~~~F~~~D~d~~G~I 515 (577)
..+..+|+.||.|++|+-
T Consensus 117 ---~~i~~aF~~~D~d~~G~~ 134 (150)
T 2jjz_A 117 ---SAVLKLVMMFEGKANESS 134 (150)
T ss_dssp ---CCHHHHHHC---------
T ss_pred ---HHHHHHHHHHcCCCCCCC
Confidence 146779999999999984
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.32 E-value=1.6e-12 Score=119.05 Aligned_cols=119 Identities=19% Similarity=0.242 Sum_probs=94.4
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc------cc
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HD 492 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~------~~ 492 (577)
..+..+|..+|.|++|.|+.+||..++.. ++...+..++..+|+.+|.|++|.|+++||..++........ ..
T Consensus 56 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~ 134 (183)
T 1s6c_A 56 TYAHYLFNAFDTTQTGSVKFEDFVTALSI-LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLK 134 (183)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHH-HcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCcc
Confidence 45677899999999999999999999854 555667889999999999999999999999988765321100 00
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhC
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 538 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 538 (577)
.......+..+|+.+|.|++|.|+.+||..++.....+...|..+|
T Consensus 135 ~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~l~~~d 180 (183)
T 1s6c_A 135 EDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDDNIMRSLQLFQ 180 (183)
T ss_dssp ---CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcChHHHHHHHHhh
Confidence 1111246788999999999999999999999988877777777665
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.6e-12 Score=103.28 Aligned_cols=74 Identities=27% Similarity=0.460 Sum_probs=64.6
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
|...+++++.++++.+|..+|.|++|+|+.+||..+|. .+| .+++.+++.+|..+|.|++|.|+|+||+.++..
T Consensus 1 m~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 74 (86)
T 2opo_A 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALK-TLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 74 (86)
T ss_dssp -----CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHH-TTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CCccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHH-HcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 34567888899999999999999999999999999995 588 899999999999999999999999999987754
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-12 Score=115.62 Aligned_cols=89 Identities=11% Similarity=0.251 Sum_probs=74.6
Q ss_pred hHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccH
Q 008127 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 494 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~ 494 (577)
.+++++++.+|..||.|++|+|+.+||..+|. .+|..+++.+++.+|..+|.|++|.|+|+||+.++... .
T Consensus 44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~-~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~---~----- 114 (147)
T 1wy9_A 44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLE-KLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK---R----- 114 (147)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS---G-----
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh---H-----
Confidence 57888999999999999999999999999995 58999999999999999999999999999999876532 1
Q ss_pred HHHHHHHHHHhhcCCCCCCcc
Q 008127 495 KWHLRSQAAFEKFDIDRDGFI 515 (577)
Q Consensus 495 ~~~~~~~~~F~~~D~d~~G~I 515 (577)
..+..+|+.||.|++|..
T Consensus 115 ---~~~~~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 115 ---SAILRMILMYEEKNKEHK 132 (147)
T ss_dssp ---GGGGGGGGGCCCC-----
T ss_pred ---HHHHHHHHHHccCCCCCC
Confidence 135669999999999984
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.31 E-value=2.9e-12 Score=119.98 Aligned_cols=131 Identities=20% Similarity=0.198 Sum_probs=95.5
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhh-hh-cccccHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH-QL-EEHDSEKWH 497 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~-~~-~~~~~~~~~ 497 (577)
.+.++|..+|.|++|.|+..||..++...........++..+|+.+|.|++|.|+++||..++.... .. ......+..
T Consensus 75 ~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~ 154 (207)
T 2ehb_A 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIE 154 (207)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHH
Confidence 4567899999999999999999999955333445678899999999999999999999998775321 11 111222333
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcccHHHHH
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFR 551 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~ 551 (577)
..+..+|+.+|.|++|.|+.+||..++.....+...+.. ..-+|+.++|.+|+
T Consensus 155 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~~ 207 (207)
T 2ehb_A 155 VMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTL-PYLKDINRTFPSFV 207 (207)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHCGGGGGGGCC-TTTTSTTTC-----
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHhcc-hhhhhhhhcCcCcC
Confidence 446789999999999999999999988766554444432 33568999999885
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.28 E-value=3.5e-12 Score=121.50 Aligned_cols=120 Identities=19% Similarity=0.256 Sum_probs=95.3
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc------c
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH------D 492 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~------~ 492 (577)
..+..+|..+|.|++|.|+.+||..++.. +.....++.+..+|+.+|.|+||.|+++||..++......... .
T Consensus 102 ~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~-~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~ 180 (229)
T 3dd4_A 102 TYAHFLFNAFDTDHNGAVSFEDFIKGLSI-LLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLK 180 (229)
T ss_dssp HHHHHHHHTTCSSCCSSCCHHHHHHHHHH-HHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHcCCCCCCeEeHHHHHHHHHH-HcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcc
Confidence 34677899999999999999999999854 4445667899999999999999999999999887654211000 0
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCC
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADI 539 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~ 539 (577)
.......+..+|+.+|+|+||.|+.+||..++.....+..+|..+|.
T Consensus 181 ~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~D~ 227 (229)
T 3dd4_A 181 EDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFEN 227 (229)
T ss_dssp ---CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhCHHHHHHHHhccc
Confidence 00011357789999999999999999999999988888888888874
|
| >2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A | Back alignment and structure |
|---|
Probab=99.28 E-value=3.9e-13 Score=114.45 Aligned_cols=99 Identities=17% Similarity=0.205 Sum_probs=50.5
Q ss_pred hhCCCCccHHHHHHHHHhhcCCCCcceehhhHHH-----HHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHh
Q 008127 447 KDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA-----ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 521 (577)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~-----~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~ 521 (577)
+.+|..+++.+++.++..+ +|.|+|+||+. ++.... . ... ....++++|+.|| |+|+.+||+
T Consensus 3 r~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~-~-~~~---~~~~l~~aF~~fD----G~I~~~El~ 69 (123)
T 2kld_A 3 TAIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLK-L-KKN---TVDDISESLRQGG----GKLNFDELR 69 (123)
T ss_dssp ---------------------------------------------------------CCSCSSTTTT----TCEEHHHHH
T ss_pred hhcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhh-c-Chh---HHHHHHHHHHHhC----CCCCHHHHH
Confidence 4589999999999999876 89999999998 443211 1 111 1134677999998 999999999
Q ss_pred hhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 522 MHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 522 ~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
.++...| ++.++++.+|.|+||.|+|+||+.+|....
T Consensus 70 ~~l~~lG~t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 110 (123)
T 2kld_A 70 QDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLE 110 (123)
T ss_dssp HHTTTCCSSHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTT
T ss_pred HHHHHhCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 9998877 589999999999999999999999986544
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=4e-12 Score=123.33 Aligned_cols=119 Identities=20% Similarity=0.228 Sum_probs=96.2
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc------cc
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HD 492 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~------~~ 492 (577)
..+..+|..+|.|++|.|+.+||..++.. ++....++++..+|+.+|.|++|.|+++||..++........ ..
T Consensus 129 ~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~-~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~ 207 (256)
T 2jul_A 129 TYAHFLFNAFDADGNGAIHFEDFVVGLSI-LLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILR 207 (256)
T ss_dssp HHHHHHHHHSSCSCCSEECSHHHHHHHHH-HHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSC
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHH-HhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccc
Confidence 45788999999999999999999999954 566678899999999999999999999999988765421100 00
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhC
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 538 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 538 (577)
.......+..+|+.+|.|+||.|+.+||..++.....+.+.|..+|
T Consensus 208 ~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~~l~~~l~~~d 253 (256)
T 2jul_A 208 EDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQLFE 253 (256)
T ss_dssp CCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHCSSHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhCHHHHHHHHhhc
Confidence 0112346788999999999999999999999988777878777765
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.27 E-value=9.6e-12 Score=116.10 Aligned_cols=118 Identities=17% Similarity=0.148 Sum_probs=95.2
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc-----cc-
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE-----EH- 491 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~-----~~- 491 (577)
...+..+|..+|.|++|.|+.+||..++.. ++...+..++..+|+.+|.|++|.|+++||..++....... +.
T Consensus 58 ~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~ 136 (204)
T 1jba_A 58 TQYVEAMFRAFDTNGDNTIDFLEYVAALNL-VLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVE 136 (204)
T ss_dssp HHHHHHHHHHHCCSSSSEECHHHHHHHHHH-HSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTT
T ss_pred HHHHHHHHHHHcCCCCCeEeHHHHHHHHHH-HccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCcccc
Confidence 346778899999999999999999999954 56667788999999999999999999999998876542111 00
Q ss_pred -----ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHH
Q 008127 492 -----DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 536 (577)
Q Consensus 492 -----~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~ 536 (577)
........+..+|+.+|.|+||.|+.+||..++....++.+++..
T Consensus 137 ~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~ 186 (204)
T 1jba_A 137 AEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQM 186 (204)
T ss_dssp SSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTTTTHHHHHHS
T ss_pred ccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHcChHHHHHHHh
Confidence 000112467889999999999999999999999988888888773
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=4.7e-12 Score=103.32 Aligned_cols=59 Identities=32% Similarity=0.571 Sum_probs=54.4
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
...++++|+.||+|++|+|+.+||+.++...| +++++|+.+|.|+||.|+|+||+.+|.
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG 99 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence 45789999999999999999999999998776 699999999999999999999999873
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3e-12 Score=117.97 Aligned_cols=119 Identities=21% Similarity=0.233 Sum_probs=92.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc------cc
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HD 492 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~------~~ 492 (577)
..+..+|..+|.|++|.|+.+||..++.. ++...+..++..+|+.+|.|++|.|+++||..++........ ..
T Consensus 63 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~ 141 (190)
T 1g8i_A 63 KFATFVFNVFDENKDGRIEFSEFIQALSV-TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEE 141 (190)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGG
T ss_pred HHHHHHHHHHhcCCCCeEeHHHHHHHHHH-hcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccc
Confidence 34788999999999999999999999854 555677889999999999999999999999987765311100 00
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhC
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 538 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 538 (577)
.......+..+|+.+|.|++|.|+.+||..++.....+...+..+|
T Consensus 142 ~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~~~~~~~~~~~~ 187 (190)
T 1g8i_A 142 ENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSLYD 187 (190)
T ss_dssp GSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHHHHHHHCCBT
T ss_pred cccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhChHHHHHHhhhc
Confidence 0111346788999999999999999999998876655655555443
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.1e-11 Score=99.58 Aligned_cols=89 Identities=28% Similarity=0.486 Sum_probs=72.2
Q ss_pred cchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccc
Q 008127 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 492 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~ 492 (577)
.++++.++++.+|..+|.|++|+|+.+||..+|. .+|..+++.++..+|..+|.|++|.|+|+||+.++....... .
T Consensus 3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~--~ 79 (92)
T 2kn2_A 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMI-NLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGG--G 79 (92)
T ss_dssp CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTC--C
T ss_pred CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCC--C
Confidence 4566778999999999999999999999999995 589999999999999999999999999999998776433221 1
Q ss_pred cHHHHHHHHHHHh
Q 008127 493 SEKWHLRSQAAFE 505 (577)
Q Consensus 493 ~~~~~~~~~~~F~ 505 (577)
... ...++.||+
T Consensus 80 ~~~-~~~l~~aF~ 91 (92)
T 2kn2_A 80 GNG-WSRLRRKFS 91 (92)
T ss_dssp CHH-HHHHHHHHT
T ss_pred Cch-HHHHHHHhc
Confidence 111 235667775
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.25 E-value=2.1e-11 Score=118.27 Aligned_cols=82 Identities=13% Similarity=0.104 Sum_probs=61.4
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCC-eeEEEEEEEcCCeEEEE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn-iv~~~~~~~~~~~~~lv 175 (577)
.|.+....+.|..+.||++. ..+|..+++|..... ....+.+|+.+++.+..+.- +++++++....+..|+|
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~-~~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLS-AQGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEE-CTTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CCceEecccCCCCceEEEEe-cCCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 46665544566779999996 356778999986543 12347889999999975522 56788888888889999
Q ss_pred EeccCCCchh
Q 008127 176 MELCEGGELL 185 (577)
Q Consensus 176 ~e~~~~g~L~ 185 (577)
|||++|.+|.
T Consensus 94 ~e~i~G~~l~ 103 (264)
T 1nd4_A 94 LGEVPGQDLL 103 (264)
T ss_dssp EECCSSEETT
T ss_pred EEecCCcccC
Confidence 9999998873
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.24 E-value=5.9e-12 Score=110.37 Aligned_cols=105 Identities=19% Similarity=0.169 Sum_probs=51.5
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh------c
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL------E 489 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~------~ 489 (577)
.-...|..+|.|+||.|+.+||..++...+. ....++++..+|+.+|.|++|.|+++||..++...... .
T Consensus 28 ~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~ 107 (143)
T 3a4u_B 28 ASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAP 107 (143)
T ss_dssp -----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC------------
T ss_pred CCHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCC
Confidence 3456899999999999999999998855322 12345788999999999999999999999766543210 0
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhh
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 524 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l 524 (577)
.....+....+..+|+.+|.|+||.|+.+||..++
T Consensus 108 ~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 108 LMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp -CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 11222333345778899999999999999998765
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.24 E-value=6.9e-12 Score=119.00 Aligned_cols=118 Identities=19% Similarity=0.255 Sum_probs=92.2
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh-c----c-cc
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL-E----E-HD 492 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~-~----~-~~ 492 (577)
..+..+|..+|.|++|.|+.+||..++.. ++....++++..+|+.+|.|++|.|+++||..++...... - . ..
T Consensus 89 ~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~-~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~ 167 (224)
T 1s1e_A 89 TYAHYLFNAFDTTQTGSVKFEDFVTALSI-LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLK 167 (224)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGC
T ss_pred HHHHHHHHHhcCCCCCcEeHHHHHHHHHH-HccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCC
Confidence 45677899999999999999999999854 4455678899999999999999999999999887653211 0 0 01
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHh
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEA 537 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~ 537 (577)
.......+..+|+.+|.|+||.|+.+||..++.....+...|...
T Consensus 168 ~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~~l~~~l~~~ 212 (224)
T 1s1e_A 168 EDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLF 212 (224)
T ss_dssp SSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTCHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHHHHHHhcCC
Confidence 111124678899999999999999999999988766566665543
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.23 E-value=3.4e-11 Score=109.13 Aligned_cols=100 Identities=20% Similarity=0.200 Sum_probs=80.9
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCcc-------HHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccccc
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK-------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 493 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~-------~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~ 493 (577)
+..+|..+|.|++|.|+.+||..++......... ...+..+|+.+|.|++|.|+++||..++.... + .
T Consensus 60 ~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-~----~ 134 (176)
T 1nya_A 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG-M----S 134 (176)
T ss_dssp HHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT-C----C
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC-C----C
Confidence 3488999999999999999999998653332222 36789999999999999999999998776532 1 1
Q ss_pred HHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC
Q 008127 494 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG 528 (577)
Q Consensus 494 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 528 (577)
...+..+|+.+|.|++|.|+.+||..++....
T Consensus 135 ---~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~ 166 (176)
T 1nya_A 135 ---KAEAAEAFNQVDTNGNGELSLDELLTAVRDFH 166 (176)
T ss_dssp ---HHHHHHHHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred ---HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHh
Confidence 23577899999999999999999998886543
|
| >1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A | Back alignment and structure |
|---|
Probab=99.22 E-value=5.4e-11 Score=112.90 Aligned_cols=129 Identities=13% Similarity=0.185 Sum_probs=94.5
Q ss_pred hhhccccccccC-CCCCCCCHHHHHHHHHhh-------CCCCc-----cHHHHHHHHHhhcCCCCcceehhhHHHHHhhh
Q 008127 419 ADLRDQFDAIDV-DKNGSISLEEMRQALAKD-------LPWKL-----KESRVLEILQAIDCNTDGLVDFSEFVAATLHV 485 (577)
Q Consensus 419 ~~l~~~F~~~D~-d~dG~i~~~el~~~l~~~-------~~~~~-----~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~ 485 (577)
..+.++|+.... .++..|+..++...|... .+... .+..+..+|+.||.|++|.|+|.||+.++...
T Consensus 82 ~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~~aLs~l 161 (261)
T 1eg3_A 82 SAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISL 161 (261)
T ss_dssp HHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHHHHHHHH
Confidence 344555555433 356688999988776431 12111 13456779999999999999999999877654
Q ss_pred hhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcC-------cC------------cHHHHHHHhCCCCCCccc
Q 008127 486 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL-------KG------------SIDPLLEEADIDKDGRIS 546 (577)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-------~~------------~~~~~~~~~D~d~dG~i~ 546 (577)
.... ..++++.+|++|| |+||+|+.+||..++.. .| .++.+|+.+| +||.|+
T Consensus 162 ~rG~------leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It 232 (261)
T 1eg3_A 162 CKAH------LEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIE 232 (261)
T ss_dssp SSSC------HHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBC
T ss_pred cCCC------HHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCC
Confidence 3221 1347889999999 99999999999987743 12 1788999986 899999
Q ss_pred HHHHHHHHhh
Q 008127 547 LSEFRRLLRT 556 (577)
Q Consensus 547 ~~EF~~~l~~ 556 (577)
.+||+..++.
T Consensus 233 ~~EFl~~~~~ 242 (261)
T 1eg3_A 233 AALFLDWMRL 242 (261)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999875
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.6e-11 Score=135.95 Aligned_cols=124 Identities=15% Similarity=0.227 Sum_probs=105.3
Q ss_pred hhhcccccc--ccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC-------CCcceehhhHHHHHhhhhhhc
Q 008127 419 ADLRDQFDA--IDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-------TDGLVDFSEFVAATLHVHQLE 489 (577)
Q Consensus 419 ~~l~~~F~~--~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d-------~dg~i~f~EF~~~~~~~~~~~ 489 (577)
..++++|.. +|.|+||.|+..|+..+|.. ...+++.+|+.+|.+ ++|.|+|+||..++....
T Consensus 150 ~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~------~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~--- 220 (885)
T 3ohm_B 150 TFLRKAYTKLKLQVNQDGRIPVKNILKMFSA------DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLC--- 220 (885)
T ss_dssp HHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG------GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHS---
T ss_pred HHHHHHHHHhcCccCCCCccCHHHHHHHHhc------CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcC---
Confidence 567888887 89999999999999998842 467899999999987 889999999998775432
Q ss_pred ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----------------cHHHHHHHhCCC----CCCcccHHH
Q 008127 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------------SIDPLLEEADID----KDGRISLSE 549 (577)
Q Consensus 490 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------------~~~~~~~~~D~d----~dG~i~~~E 549 (577)
. . .+++++|+.||.+++|+|+.+||+.+|...+ ++.++|+.+|.+ ++|.|++++
T Consensus 221 ~--R----~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~Lsldg 294 (885)
T 3ohm_B 221 L--R----PDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEG 294 (885)
T ss_dssp C--C----HHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHH
T ss_pred C--H----HHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhh
Confidence 1 1 2578899999999999999999999997542 278899999999 799999999
Q ss_pred HHHHHhhc
Q 008127 550 FRRLLRTA 557 (577)
Q Consensus 550 F~~~l~~~ 557 (577)
|..+|...
T Consensus 295 F~~yL~S~ 302 (885)
T 3ohm_B 295 FSRYLGGE 302 (885)
T ss_dssp HHHHHTST
T ss_pred hhhhccCc
Confidence 99999863
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.21 E-value=6.6e-12 Score=119.35 Aligned_cols=132 Identities=20% Similarity=0.168 Sum_probs=91.9
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhh-h-hcccccHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH-Q-LEEHDSEKWH 497 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~-~-~~~~~~~~~~ 497 (577)
.+.++|..+|.|++|.|+.+||..++...........++..+|+.+|.|++|.|+++||..++.... . .......+..
T Consensus 86 ~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~ 165 (226)
T 2zfd_A 86 FADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIE 165 (226)
T ss_dssp HHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence 3566899999999999999999999965333445677899999999999999999999998775321 1 1111223333
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcccHHHHHH
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRR 552 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~~ 552 (577)
..+..+|+.+|.|+||.|+.+||..++.....+...+.. ..-++..++|.+|+.
T Consensus 166 ~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~~~ 219 (226)
T 2zfd_A 166 DIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTL-QYLKDITTTFPSFVF 219 (226)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHHSGGGGGGGCC-GGGGGHHHHC-----
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHhch-HHhhchhhcchhHHh
Confidence 456789999999999999999999988765443333221 122344566666653
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.1e-11 Score=100.84 Aligned_cols=70 Identities=21% Similarity=0.346 Sum_probs=61.8
Q ss_pred hHHHhhhcccccccc-CCCC-CCCCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D-~d~d-G~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..+..|+++|+.|| .|++ |+|+.+||+.+|... +|..+++.+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 346788999999998 8998 999999999999643 367788999999999999999999999999987654
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.7e-11 Score=98.18 Aligned_cols=75 Identities=25% Similarity=0.461 Sum_probs=68.1
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
|...++++++.+++.+|..+|.|++|+|+.+||..+|. .+|..+++.++..+|..+|.|++|.|+|+||+.++..
T Consensus 10 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR-MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 44457888999999999999999999999999999995 5899999999999999999999999999999987643
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.19 E-value=2e-11 Score=135.17 Aligned_cols=125 Identities=18% Similarity=0.171 Sum_probs=105.4
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
+++..+|..+|.|++|.|+.+||..++... .++..+|+.+|.|++|.|+.+||..++..... ... ..
T Consensus 575 ~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~-------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~---~ls---~~ 641 (714)
T 3bow_A 575 ETCKIMVDMLDEDGSGKLGLKEFYILWTKI-------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGF---KLP---CQ 641 (714)
T ss_dssp HHHHHHHHHHCCSSCSSBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTE---ECC---HH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHH-------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCC---CCC---HH
Confidence 356778889999999999999999998542 78999999999999999999999987754321 111 13
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
.+..+|+.+| |+||.|+.+||..++.....+.++|+.+|.|+||.|+++|+..++...
T Consensus 642 ~~~~l~~~~D-d~dG~Isf~EF~~~l~~~~~l~~~F~~~D~d~dG~Is~~el~~l~~~~ 699 (714)
T 3bow_A 642 LHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFSV 699 (714)
T ss_dssp HHHHHHHHHS-CTTCEECHHHHHHHHHHHHHHHHHHSSSCSSCCSEEEEEHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEHHHHHHHHHHH
Confidence 6778999999 999999999999998877788999999999999999999988776543
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.6e-11 Score=106.44 Aligned_cols=102 Identities=13% Similarity=0.044 Sum_probs=60.8
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHH
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 500 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~ 500 (577)
.+++|..+|.|++|.|+.+||..++...+.......++..+|+.+|.|++|.|+.+||..++..... .... ...+
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--~~~~---~~e~ 79 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGI--EGMS---KEDA 79 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTC--CCCC---HHHH
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCC--CCCC---HHHH
Confidence 4678999999999999999999988553443445678999999999999999999999987754321 1111 1357
Q ss_pred HHHHhhcCCCCCCcccHHHHhhhhcCc
Q 008127 501 QAAFEKFDIDRDGFITPEELRMHTGLK 527 (577)
Q Consensus 501 ~~~F~~~D~d~~G~I~~~El~~~l~~~ 527 (577)
..+|+.+|.|++|.|+.+||..++...
T Consensus 80 ~~~~~~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 80 QGMVREGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence 789999999999999999999888654
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.18 E-value=6.3e-11 Score=101.87 Aligned_cols=94 Identities=23% Similarity=0.366 Sum_probs=77.9
Q ss_pred HHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcC---cC------
Q 008127 458 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL---KG------ 528 (577)
Q Consensus 458 ~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~---~~------ 528 (577)
+..+|..+|.|++|.|+++||..++..... ... ...+..+|+.+|.|++|.|+.+||..++.. ..
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~---~~~---~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 75 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRA---IKN---EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI 75 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCC---SSH---HHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCC---CCC---HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHH
Confidence 678999999999999999999987654321 111 236788999999999999999999998852 21
Q ss_pred cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 529 SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 529 ~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
++..+|+.+|.|++|.|+++||..++...
T Consensus 76 ~~~~~f~~~D~d~~G~i~~~e~~~~l~~~ 104 (134)
T 1jfj_A 76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKH 104 (134)
T ss_dssp HHHHHHHHHCCSSSSEEEHHHHHHHHTTT
T ss_pred HHHHHHHHHCCCCCCccCHHHHHHHHHHh
Confidence 48899999999999999999999999753
|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
Probab=99.17 E-value=2.3e-11 Score=96.41 Aligned_cols=74 Identities=14% Similarity=0.169 Sum_probs=67.4
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHH---HHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR---VLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~---~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
|...++++++.+++.+|..||.|++|+|+..||..+|. .+|..+++.+ +..+|..+|.|++|.|+| ||+.++..
T Consensus 4 ~~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 4 KARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLT-KLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp CCCCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHH-HTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 45667888999999999999999999999999999994 5899999999 999999999999999999 99987643
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.7e-11 Score=94.84 Aligned_cols=70 Identities=27% Similarity=0.613 Sum_probs=64.4
Q ss_pred cchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
+++++.++++.+|..+|.|++|+|+.+||..+|. .+|..+++.++..+|..+|.|++|.|+|+||+.++.
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 70 (77)
T 2joj_A 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMR-ALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMT 70 (77)
T ss_dssp CCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHH-HHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH-HhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 3567888999999999999999999999999995 479999999999999999999999999999998765
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.17 E-value=2.5e-11 Score=97.59 Aligned_cols=70 Identities=29% Similarity=0.340 Sum_probs=62.7
Q ss_pred cchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhh
Q 008127 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 485 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~ 485 (577)
+++++.++++++|+.||.|+||+|+.+||..+|.. +| .++.++..+++.+|.|+||.|+|+||+.++...
T Consensus 3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~-~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK-SK--LPILELSHIWELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHH-HS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 46788899999999999999999999999999955 55 678899999999999999999999999877543
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.16 E-value=3e-11 Score=97.73 Aligned_cols=70 Identities=23% Similarity=0.234 Sum_probs=62.8
Q ss_pred cchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhh
Q 008127 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 485 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~ 485 (577)
+++++.++++++|+.||+|+||+|+.+||..+|.. +| .++.+++.+++.+|.|+||.|+|+||+.++...
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~-~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 73 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK-TG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLI 73 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHT-TT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH-cC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 46778899999999999999999999999999954 55 678899999999999999999999999877543
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=3.6e-11 Score=100.63 Aligned_cols=89 Identities=19% Similarity=0.322 Sum_probs=63.4
Q ss_pred hHHHhhhccccccccC-CCCC-CCCHHHHHHHHHhhCCCC-----ccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhh
Q 008127 415 DEELADLRDQFDAIDV-DKNG-SISLEEMRQALAKDLPWK-----LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 487 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~-d~dG-~i~~~el~~~l~~~~~~~-----~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~ 487 (577)
++++.+++++|..||. |++| +|+.+||..+|...+|.. .++.+++.+|+.+|.|+||.|+|+||+.++....
T Consensus 8 ~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~- 86 (113)
T 1xk4_C 8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT- 86 (113)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH-
Confidence 3457889999999995 9999 999999999996457742 5789999999999999999999999998775321
Q ss_pred hcccccHHHHHHHHHHHhhcCCCCCCcc
Q 008127 488 LEEHDSEKWHLRSQAAFEKFDIDRDGFI 515 (577)
Q Consensus 488 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I 515 (577)
......|...| +++|.=
T Consensus 87 ----------~~~~~~f~~~~-~~~g~~ 103 (113)
T 1xk4_C 87 ----------WASHEKMHEGD-EGPGHH 103 (113)
T ss_dssp ----------HHHHC-------------
T ss_pred ----------HHHHHHHhhCC-CCCccc
Confidence 13345788888 888863
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=4.8e-11 Score=97.67 Aligned_cols=70 Identities=20% Similarity=0.393 Sum_probs=60.4
Q ss_pred hHHHhhhcccccccc-CCCC-CCCCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D-~d~d-G~i~~~el~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..+++++++|+.|| .|+| |+|+.+||+.+|...+| ..+++.+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 9 e~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 456789999999998 7786 89999999999964454 4568999999999999999999999999987754
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.6e-10 Score=102.21 Aligned_cols=108 Identities=19% Similarity=0.182 Sum_probs=83.2
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
.+..+|..+|.|++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++...... .....+....
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~-~~~~~~~~~~ 117 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-NLKDTQLQQI 117 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGG-GSCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc-CCCHHHHHHH
Confidence 456789999999999999999999996543444667889999999999999999999999877542111 1122222334
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcCcC
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGLKG 528 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 528 (577)
+..+|..+|.|++|.|+.+||..++...+
T Consensus 118 ~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 146 (155)
T 3ll8_B 118 VDKTIINADKDGDGRISFEEFCAVVGGLD 146 (155)
T ss_dssp HHHHHHHHCTTSSSSBCHHHHHHHHGGGC
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence 45556669999999999999999887654
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=4.9e-11 Score=95.76 Aligned_cols=70 Identities=20% Similarity=0.387 Sum_probs=59.2
Q ss_pred hHHHhhhcccccccc-CCCC-CCCCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D-~d~d-G~i~~~el~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..+++++++|+.|| .||+ |+|+.+||+.+|...+| ...++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 6 e~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 456789999999998 6885 89999999999964455 3457899999999999999999999999987654
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.13 E-value=3.7e-11 Score=99.77 Aligned_cols=70 Identities=19% Similarity=0.363 Sum_probs=61.6
Q ss_pred hHHHhhhcccccccc-CCCCC-CCCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAID-VDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D-~d~dG-~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
.+++++++++|+.|| .|++| +|+.+||..+|... +|..+++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 18 ~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 18 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 456789999999999 89997 99999999999543 556778899999999999999999999999987653
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=5.7e-11 Score=98.95 Aligned_cols=71 Identities=20% Similarity=0.298 Sum_probs=64.1
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 485 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~ 485 (577)
.+++++.++++++|+.||.|+||+|+.+||..+|. +..+++.++..+|+.+|.|+||.|+|+||+.++...
T Consensus 7 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~---~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~ 77 (111)
T 2kgr_A 7 AVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM---QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLI 77 (111)
T ss_dssp SSCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH---TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH---hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 45778889999999999999999999999999995 567889999999999999999999999999877543
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.12 E-value=3.5e-11 Score=97.77 Aligned_cols=61 Identities=16% Similarity=0.197 Sum_probs=53.7
Q ss_pred HHHHHHHhhcC-CCCC-CcccHHHHhhhhcC-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 498 LRSQAAFEKFD-IDRD-GFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 498 ~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
..++++|+.|| +||+ |+|+.+||+.++.. ++ +++++|+.+|.|+||.|+|+||+.+|....
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~~ 83 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC 83 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 46889999997 8998 99999999998874 23 499999999999999999999999997644
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.12 E-value=4.8e-11 Score=109.08 Aligned_cols=95 Identities=18% Similarity=0.211 Sum_probs=76.8
Q ss_pred cccccccCCCCCCCCHHHHHHHHHhhCCC--------CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccH
Q 008127 423 DQFDAIDVDKNGSISLEEMRQALAKDLPW--------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 494 (577)
Q Consensus 423 ~~F~~~D~d~dG~i~~~el~~~l~~~~~~--------~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~ 494 (577)
.+|..+|.|++|.|+.+||..++...... ......+..+|+.+|.|++|.|+++||..++.... +..
T Consensus 64 ~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g-~~~---- 138 (185)
T 2sas_A 64 DLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ-LQC---- 138 (185)
T ss_dssp HHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC-CCC----
T ss_pred HHHHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC-CCH----
Confidence 56999999999999999999988653222 22457899999999999999999999998765432 211
Q ss_pred HHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 495 KWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 495 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
..+..+|+.+|.|+||.|+.+||..++.
T Consensus 139 ---~~~~~~~~~~D~d~dG~i~~~ef~~~~~ 166 (185)
T 2sas_A 139 ---ADVPAVYNVITDGGKVTFDLNRYKELYY 166 (185)
T ss_dssp ---SSHHHHHHHHHTTTTSCCSHHHHHHHHH
T ss_pred ---HHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 1466799999999999999999988763
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.12 E-value=5.9e-11 Score=104.93 Aligned_cols=89 Identities=18% Similarity=0.276 Sum_probs=73.8
Q ss_pred CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC---
Q 008127 452 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--- 528 (577)
Q Consensus 452 ~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--- 528 (577)
.+++.+++.++..+|.+++ |.+|..+ .+....++.+|+.||+|++|+|+.+||+.++...|
T Consensus 20 ~~~~~~~~~i~~~~d~~~~----~~~~~~l------------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~ 83 (150)
T 2jjz_A 20 ARQERRLAEINREFLCDQK----YSDEENL------------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPK 83 (150)
T ss_dssp HHHHHHHHHHHHHHHTCGG----GSSCTTH------------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCC
T ss_pred CCcHHHHHHHHHHhccCCC----chhhHhH------------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCC
Confidence 4678899999999998765 5555321 11234688899999999999999999999998766
Q ss_pred ---cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 529 ---SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 529 ---~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
++..++..+|.|+||.|+|+||+.++..
T Consensus 84 ~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~ 114 (150)
T 2jjz_A 84 THLEMKKMISEVTGGVSDTISYRDFVNMMLG 114 (150)
T ss_dssp CHHHHHHHHHHHHTTSCSSBCHHHHHHHHHS
T ss_pred CHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 4899999999999999999999999975
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.8e-10 Score=95.68 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=78.9
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++++ ++.++|..+| ++|.|+.+||..++.. ......++..+|+.+|.|++|.|+.+||..++........
T Consensus 5 ~~~~~~---ei~~~~~~~D--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~ 76 (109)
T 3fs7_A 5 DILSAK---DIESALSSCQ--AADSFNYKSFFSTVGL---SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSAR 76 (109)
T ss_dssp GTSCHH---HHHHHHHHTC--STTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSC
T ss_pred CcCCHH---HHHHHHHhcC--CCCcCcHHHHHHHHhc---CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccc
Confidence 344554 4566677777 8999999999999842 3456789999999999999999999999876654310011
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
... ...+..+|+.+|.|++|.|+.+||..++.
T Consensus 77 ~~~---~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 77 VLT---SAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCC---HHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred cCC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 111 23577899999999999999999998775
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.5e-11 Score=97.62 Aligned_cols=79 Identities=30% Similarity=0.397 Sum_probs=63.3
Q ss_pred CCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCC
Q 008127 468 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDK 541 (577)
Q Consensus 468 d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~ 541 (577)
|++|.|+|+|++ +. ..+..... ..++.+|+.||+|++|+|+.+||+.++...+ ++..+++.+|.|+
T Consensus 1 ~~~G~i~~~e~~--~~--~~l~~~~~----~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~ 72 (87)
T 1s6j_A 1 HSSGHIDDDDKH--MA--ERLSEEEI----GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72 (87)
T ss_dssp CCSSSSSSHHHH--SS--SSSCSSST----TTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTC
T ss_pred CCCCccCccHHH--HH--HHCCHHHH----HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC
Confidence 578999999943 22 12222111 2467799999999999999999999998777 4899999999999
Q ss_pred CCcccHHHHHHHH
Q 008127 542 DGRISLSEFRRLL 554 (577)
Q Consensus 542 dG~i~~~EF~~~l 554 (577)
||.|+|+||+.++
T Consensus 73 ~g~i~~~eF~~~~ 85 (87)
T 1s6j_A 73 SGTIDYGEFIAAT 85 (87)
T ss_dssp SSEECHHHHTTCC
T ss_pred CCcCcHHHHHHHH
Confidence 9999999998754
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=99.11 E-value=9.7e-11 Score=96.30 Aligned_cols=70 Identities=24% Similarity=0.357 Sum_probs=62.9
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 485 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~ 485 (577)
.++++++++++++|+.||+ +||+|+.+|+..+|.. +| +++.++..|++.+|.|+||.|+|+||+.++...
T Consensus 8 ~ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~-~g--l~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~ 77 (106)
T 1eh2_A 8 AVKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLN-SK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 77 (106)
T ss_dssp SSCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHT-TT--CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHH-cC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 3567889999999999999 9999999999999954 65 678899999999999999999999999887654
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1e-10 Score=95.11 Aligned_cols=70 Identities=23% Similarity=0.332 Sum_probs=59.5
Q ss_pred hHHHhhhccccccccCCC---CCCCCHHHHHHHHHhhCCCCc----cHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAIDVDK---NGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~---dG~i~~~el~~~l~~~~~~~~----~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..+++|+++|+.||.++ +|+|+.+||+.+|...++..+ ++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 7 e~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~ 83 (100)
T 3nxa_A 7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGG 83 (100)
T ss_dssp HHHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 356788999999999964 799999999999966555333 3789999999999999999999999987764
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.10 E-value=3.1e-10 Score=104.31 Aligned_cols=104 Identities=23% Similarity=0.337 Sum_probs=82.1
Q ss_pred CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc-----ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcC
Q 008127 452 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH-----DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL 526 (577)
Q Consensus 452 ~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~-----~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 526 (577)
.....++..+|..+|.|++|.|+++||..++......... ........+..+|+.+|.|++|.|+.+||..++..
T Consensus 36 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~ 115 (191)
T 3khe_A 36 LEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMD 115 (191)
T ss_dssp TTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 3345689999999999999999999999877643111100 11112346788999999999999999999988754
Q ss_pred cC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 527 KG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 527 ~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
.. .+..+|+.+|.|+||.|+++||..++.
T Consensus 116 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~ 150 (191)
T 3khe_A 116 KQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150 (191)
T ss_dssp HHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred hcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc
Confidence 42 588899999999999999999999987
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.10 E-value=3.7e-10 Score=115.17 Aligned_cols=142 Identities=25% Similarity=0.413 Sum_probs=103.4
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEec--ccccCchhhHHHHHHHHHHHHHhcC-CCCeeEEEEEEEcC---CeEEE
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIE--KNKMILPIAVEDVKREVKILQALAG-HENVVKFYNAFEDD---NYVYI 174 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~--~~~~~~~~~~~~~~~E~~~l~~l~~-hpniv~~~~~~~~~---~~~~l 174 (577)
++.|+.|.++.||++.. .+..+++|+.. ..... .....+.+|+.+++.|.. +..+++++.++.+. +..|+
T Consensus 43 ~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEEC--SSCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred EEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 56799999999999974 35688899775 32211 123568899999999963 34588888888766 45899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh----------------------
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL---------------------- 232 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~---------------------- 232 (577)
||||++|..+.+.. -..++..+...++.+++.+|..||+
T Consensus 119 vme~v~G~~l~~~~-------------------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS-------------------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQI 179 (359)
T ss_dssp EEECCCCBCCCCTT-------------------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHH
T ss_pred EEEecCCeecCCCc-------------------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHH
Confidence 99999998774311 1346778888889999999999997
Q ss_pred ------------------------------------cCceeccCCCCcEEeecCCCCCCeeEEecCCCcc
Q 008127 233 ------------------------------------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266 (577)
Q Consensus 233 ------------------------------------~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~ 266 (577)
..++|+|++|.|||++..+ ...+.|+||+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~-~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 180 ERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTE-PRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSS-SCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCC-CcEEEEECcccccc
Confidence 3589999999999998411 12368999998864
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.10 E-value=6.1e-11 Score=103.85 Aligned_cols=100 Identities=14% Similarity=0.292 Sum_probs=77.9
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
++..+|..+|.|++|.|+.+||..++........+..++..+|+.+|.|++|.|+.+||..++..... .... ..
T Consensus 43 ~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~---~~~~---~~ 116 (143)
T 2obh_A 43 EIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGE---NLTD---EE 116 (143)
T ss_dssp HHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTC---CCCH---HH
T ss_pred HHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC---CCCH---HH
Confidence 45667888999999999999999887543222234567899999999999999999999987653211 1111 35
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 117 ~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 117 LQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 77899999999999999999988764
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=6.1e-11 Score=90.02 Aligned_cols=66 Identities=30% Similarity=0.535 Sum_probs=60.3
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
..++++.+|..+|.|++|+|+.+||..++ +.+|..+++.++..+|..+|.|++|.|+|+||+.++.
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l-~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAM-AGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHG-GGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 34678999999999999999999999999 4589999999999999999999999999999997653
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.7e-10 Score=103.95 Aligned_cols=93 Identities=22% Similarity=0.278 Sum_probs=79.4
Q ss_pred HHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc-----CcH
Q 008127 456 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-----GSI 530 (577)
Q Consensus 456 ~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-----~~~ 530 (577)
.++..+|..+|.|++|.|+++||..++.... .. . ..+..+|+.+|.|++|.|+.+||..++... ..+
T Consensus 39 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g-~~----~---~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~ 110 (180)
T 3mse_B 39 KYINELFYKLDTNHNGSLSHREIYTVLASVG-IK----K---WDINRILQALDINDRGNITYTEFMAGCYRWKNIESTFL 110 (180)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT-CC----H---HHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC-CC----H---HHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHHH
Confidence 5778899999999999999999998775432 11 1 357789999999999999999999877654 258
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 531 DPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 531 ~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..+|+.+|.|+||.|+.+||..++.+
T Consensus 111 ~~~F~~~D~d~~G~I~~~El~~~l~~ 136 (180)
T 3mse_B 111 KAAFNKIDKDEDGYISKSDIVSLVHD 136 (180)
T ss_dssp HHHHHHHCTTCSSCBCHHHHHHHTTT
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHcC
Confidence 89999999999999999999999984
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=5.4e-11 Score=95.43 Aligned_cols=71 Identities=32% Similarity=0.554 Sum_probs=63.0
Q ss_pred ccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
...+++++.++++.+|+.+|.|++|+|+.+||..+|. .+| .++.+++.+|..+|.|++|.|+|+||+.++.
T Consensus 18 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~-~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~ 88 (91)
T 2pmy_A 18 GADGDGEELARLRSVFAACDANRSGRLEREEFRALCT-ELR--VRPADAEAVFQRLDADRDGAITFQEFARGFL 88 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHH-HTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHH
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHH-HcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 3456678889999999999999999999999999995 477 6788999999999999999999999997654
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.3e-10 Score=106.98 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=76.6
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHhhCC--------CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccccc
Q 008127 422 RDQFDAIDVDKNGSISLEEMRQALAKDLP--------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 493 (577)
Q Consensus 422 ~~~F~~~D~d~dG~i~~~el~~~l~~~~~--------~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~ 493 (577)
..+|..+|.|++|.|+.+||..++..... .......+..+|+.+|.|++|.|+++||..++.... + .
T Consensus 67 ~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g-~----~ 141 (191)
T 2ccm_A 67 DGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG-I----P 141 (191)
T ss_dssp HHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT-C----C
T ss_pred HHHHHhcCCCCCCeECHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C----C
Confidence 35558999999999999999998855211 123356789999999999999999999998775432 1 1
Q ss_pred HHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 494 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 494 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
...+..+|+.+|+|+||.|+.+||..++.
T Consensus 142 ---~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~ 170 (191)
T 2ccm_A 142 ---KSDCDAAFDTLSDGGKTMVTREIFARLWT 170 (191)
T ss_dssp ---HHHHHHHHHHHTTTTTSCCBHHHHHHHHH
T ss_pred ---HHHHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence 13577899999999999999999988763
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.09 E-value=3e-11 Score=95.96 Aligned_cols=72 Identities=33% Similarity=0.681 Sum_probs=65.0
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHH
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 481 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~ 481 (577)
+...++++++++++++|..+|.|++|+|+..||..+|. .+|..+++.++..+|..+|.|++|.|+|+||+.+
T Consensus 13 ~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~ 84 (87)
T 1s6j_A 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 84 (87)
T ss_dssp SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHH-TTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTC
T ss_pred HHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 44556677788999999999999999999999999994 5899999999999999999999999999999854
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.08 E-value=1e-10 Score=95.20 Aligned_cols=70 Identities=24% Similarity=0.356 Sum_probs=61.4
Q ss_pred hHHHhhhcccccccc-CCCCC-CCCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAID-VDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D-~d~dG-~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
++++++++++|+.|| .|++| +|+.+||..+|... +|..+++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 6 ~~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 81 (99)
T 2y5i_A 6 EGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA 81 (99)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 346788999999997 89998 99999999999543 466788999999999999999999999999987754
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.08 E-value=1.1e-10 Score=104.16 Aligned_cols=101 Identities=19% Similarity=0.295 Sum_probs=80.0
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCC---CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLP---WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 496 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~---~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~ 496 (577)
.+..+|..+|.|++|.|+.+||..++..... .......+..+|+.+|.|++|.|+.+||..++.... ....
T Consensus 56 ~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g---~~~~--- 129 (161)
T 1dtl_A 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG---ETIT--- 129 (161)
T ss_dssp HHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC-----CCC---
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC---CCCC---
Confidence 4667899999999999999999999865433 345567899999999999999999999987654321 1111
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcC
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGL 526 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 526 (577)
...+..+|+.+|.|++|.|+.+||..++..
T Consensus 130 ~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 130 EDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp HHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 235778999999999999999999987753
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.08 E-value=8.5e-11 Score=88.05 Aligned_cols=63 Identities=21% Similarity=0.451 Sum_probs=58.3
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
+++++|..+|.|++|+|+.+||..++. .+|..+++.++..+|..+|.|++|.|+|+||+.++.
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVAL-AFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHH-HTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 578899999999999999999999995 589999999999999999999999999999997664
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=99.08 E-value=4.1e-11 Score=92.95 Aligned_cols=64 Identities=31% Similarity=0.560 Sum_probs=58.4
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
++++.+|..+|.|++|+|+.+||..++.. +| .+++.++..++..+|.|++|.|+|+||+..+..
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 66 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRT-LG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNA 66 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHH-HH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 46788999999999999999999999954 77 889999999999999999999999999987654
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=99.08 E-value=1.3e-10 Score=93.28 Aligned_cols=69 Identities=23% Similarity=0.434 Sum_probs=60.7
Q ss_pred hHHHhhhccccccccCCCCC---CCCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAIDVDKNG---SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~dG---~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..+..++++|+.|| ++|| +|+.+||+.+|... +|..+++.+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 5 e~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 80 (92)
T 3rm1_A 5 EKAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAM 80 (92)
T ss_dssp HHHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 346778999999999 7777 99999999999432 788889999999999999999999999999987754
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.2e-10 Score=100.99 Aligned_cols=101 Identities=20% Similarity=0.307 Sum_probs=82.0
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
++..+|..+|.+++|.|+..||..++.........++++..+|+.+|.|++|.|+.+||..++..... ... ...
T Consensus 47 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~---~~~---~~e 120 (148)
T 2lmt_A 47 ELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGE---KVT---DEE 120 (148)
T ss_dssp HHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTC---CCC---HHH
T ss_pred HHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCc---ccc---HHH
Confidence 46677888999999999999999988665666677888999999999999999999999877654321 111 135
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcC
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGL 526 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~ 526 (577)
+..+|+.+|.|+||.|+.+||..++..
T Consensus 121 ~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 121 IDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp HHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 778999999999999999999987753
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=1e-10 Score=95.70 Aligned_cols=61 Identities=16% Similarity=0.237 Sum_probs=52.9
Q ss_pred HHHHHHHHhhcC-CCCC-CcccHHHHhhhhcC-cC----------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 497 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 497 ~~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-~~----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
...++++|+.|| +||+ |+|+.+||+.++.. .+ +++++|+.+|.|+||.|+|+||+.+|...
T Consensus 12 ~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 357889999997 7886 89999999998874 22 49999999999999999999999998764
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.07 E-value=3.4e-10 Score=94.00 Aligned_cols=103 Identities=15% Similarity=0.233 Sum_probs=78.3
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 491 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~ 491 (577)
.+++++ +.++|..+|. +|.|+.+||..++.. ......++..+|+.+|.|++|.|+++||..++.........
T Consensus 5 ~~s~~e---i~~~~~~~d~--~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~ 76 (109)
T 5pal_A 5 VLKADD---INKAISAFKD--PGTFDYKRFFHLVGL---KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRD 76 (109)
T ss_dssp TSCHHH---HHHHHHHTCS--TTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCC
T ss_pred cCCHHH---HHHHHHHhCC--CCcCcHHHHHHHHhh---ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCC
Confidence 345544 5666777776 899999999998842 34567899999999999999999999999877543110111
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 492 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
.. ...+..+|+.+|.|++|.|+.+||..++.
T Consensus 77 ~~---~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 77 LN---DTETKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp CC---HHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred CC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 11 23577899999999999999999988764
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.2e-10 Score=104.26 Aligned_cols=96 Identities=21% Similarity=0.174 Sum_probs=76.2
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHhhCCCC-cc-----HHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHH
Q 008127 422 RDQFDAIDVDKNGSISLEEMRQALAKDLPWK-LK-----ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 495 (577)
Q Consensus 422 ~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~-~~-----~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~ 495 (577)
..+|..+|.|++|.|+.+||..++....... .. ...+..+|+.+|.|++|.|+++||..++.... + .
T Consensus 58 ~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~-~----~-- 130 (166)
T 3akb_A 58 QGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG-V----P-- 130 (166)
T ss_dssp HHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT-C----C--
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-C----C--
Confidence 4789999999999999999999875422111 01 23488999999999999999999998776432 1 1
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 496 WHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 496 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
...+..+|+.+|.|++|.|+.+||..++.
T Consensus 131 -~~~~~~~~~~~D~d~dg~i~~~ef~~~~~ 159 (166)
T 3akb_A 131 -EDLARQAAAALDTDGDGKVGETEIVPAFA 159 (166)
T ss_dssp -HHHHHHHHHHHCTTCSSBCCHHHHHHHHH
T ss_pred -HHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 13577899999999999999999988764
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A | Back alignment and structure |
|---|
Probab=99.07 E-value=8.9e-11 Score=94.84 Aligned_cols=70 Identities=23% Similarity=0.382 Sum_probs=56.3
Q ss_pred hHHHhhhcccccccc-CCC-CCCCCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAID-VDK-NGSISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D-~d~-dG~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
++++++++++|+.|| .|+ +|+|+.+||+.+|... +|..+++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 5 ~~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp HHHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 356788999999999 798 5899999999999643 456678889999999999999999999999987753
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.9e-10 Score=114.50 Aligned_cols=184 Identities=16% Similarity=0.248 Sum_probs=113.6
Q ss_pred eeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCC--eeEEEEEEEcCC---eEEEEE
Q 008127 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN--VVKFYNAFEDDN---YVYIAM 176 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpn--iv~~~~~~~~~~---~~~lv~ 176 (577)
+.++.|....||++. ..+++|+.... .....+.+|+.+|+.+..+.. ++.++......+ ..|+||
T Consensus 26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN-----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CEEEECSSEEEEEST-----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred EecCCCCcceEEEEC-----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 458999999999873 46889975422 345678999999998854433 344554443333 358899
Q ss_pred eccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh------------------------
Q 008127 177 ELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL------------------------ 232 (577)
Q Consensus 177 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~------------------------ 232 (577)
++++|.+|.+... ..++..+...++.+++..|..||+
T Consensus 96 ~~i~G~~l~~~~~-------------------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
T 3sg8_A 96 TKIKGVPLTPLLL-------------------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKK 156 (304)
T ss_dssp ECCCCEECCHHHH-------------------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHH
T ss_pred cccCCeECCcccc-------------------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHH
Confidence 9999988865322 123333444444444444444443
Q ss_pred ----------------------------------cCceeccCCCCcEEeecCCCCCCeeEEecCCCcccCCCCCcccccc
Q 008127 233 ----------------------------------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 278 (577)
Q Consensus 233 ----------------------------------~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~g 278 (577)
..++|+|++|.||+++.. ....+.|+||+.+....+.........
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~-~~~~~~~iD~~~~~~~~~~~Dl~~~~~ 235 (304)
T 3sg8_A 157 IKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE-KNTICGIIDFGDAAISDPDNDFISLME 235 (304)
T ss_dssp HHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT-TTEEEEECCCTTCEEECTTHHHHTTCC
T ss_pred HHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCC-CCCEEEEEeCCCCccCChHHHHHHHHh
Confidence 247999999999999831 135678999999875432211111110
Q ss_pred CCccccchhcc---cCCCC------------CCchhhHHHHHHHHHhCCCCC
Q 008127 279 SAYYVAPEVLK---RKSGP------------ESDVWSIGVITYILLCGRRPF 315 (577)
Q Consensus 279 t~~y~aPE~~~---~~~~~------------~~DiwSlG~il~el~tg~~Pf 315 (577)
...-.+|+... ..|.. ..+.|++|.++|.+.+|..+|
T Consensus 236 ~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 236 DDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 00002333221 11211 158999999999999998887
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1e-10 Score=105.35 Aligned_cols=102 Identities=16% Similarity=0.247 Sum_probs=81.4
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
.++..+|..+|.|++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++.... .... ..
T Consensus 64 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g---~~~~---~~ 137 (169)
T 3qrx_A 64 EEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELG---ENLT---EE 137 (169)
T ss_dssp HHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT---CCCC---HH
T ss_pred HHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC---CCCC---HH
Confidence 35677788999999999999999999855333334467889999999999999999999998775432 1111 13
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcC
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGL 526 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~ 526 (577)
.+..+|+.+|.|++|.|+.+||..++..
T Consensus 138 ~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 138 ELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 5778999999999999999999988764
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.7e-10 Score=100.60 Aligned_cols=99 Identities=13% Similarity=0.173 Sum_probs=81.4
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
.+..+|..+|.|++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++..... ... ...
T Consensus 43 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~---~~~---~~~ 116 (142)
T 2bl0_C 43 AFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGD---RLK---PHE 116 (142)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSS---CCC---HHH
T ss_pred HHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC---CCC---HHH
Confidence 46778999999999999999999998654445567889999999999999999999999987754321 111 135
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
+..+|+.+| |++|.|+.+||..++.
T Consensus 117 ~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 117 FAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp HHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred HHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 778999999 9999999999988764
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=1.2e-10 Score=93.52 Aligned_cols=61 Identities=16% Similarity=0.226 Sum_probs=52.9
Q ss_pred HHHHHHHHhhcC-CCCC-CcccHHHHhhhhcC-cC----------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 497 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 497 ~~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-~~----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
...++++|+.|| +||+ |+|+.+||+.++.. .+ +++++|+.+|.|+||.|+|+||+.+|...
T Consensus 9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 357889999997 6885 89999999998874 32 48999999999999999999999999764
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.06 E-value=8.5e-11 Score=95.00 Aligned_cols=61 Identities=25% Similarity=0.298 Sum_probs=55.6
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
..++++|+.||+|++|+|+.+|++.++...+ ++.++++.+|.|+||.|+|+||+.+|....
T Consensus 10 ~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~ 74 (95)
T 1c07_A 10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLIS 74 (95)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence 4688899999999999999999999998776 589999999999999999999999997654
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.5e-10 Score=107.68 Aligned_cols=108 Identities=18% Similarity=0.193 Sum_probs=82.1
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc-ccccHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE-EHDSEKWH 497 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~-~~~~~~~~ 497 (577)
.++..+|..+|.|++|.|+.+||..++.. .........+..+|+.+|.|++|.|+++||..++....... ........
T Consensus 73 ~~~~~~~~~~D~d~dg~i~~~ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~ 151 (204)
T 3e3r_A 73 AEAEGVCRKWDRNGSGTLDLEEFLRALRP-PMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTED 151 (204)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHTSC-CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHH
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHh-hcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChH
Confidence 35677899999999999999999998843 44445567899999999999999999999998765321000 00001112
Q ss_pred HHHHHHHhhcCC-CCCCcccHHHHhhhhcCc
Q 008127 498 LRSQAAFEKFDI-DRDGFITPEELRMHTGLK 527 (577)
Q Consensus 498 ~~~~~~F~~~D~-d~~G~I~~~El~~~l~~~ 527 (577)
..+..+|+.+|. |+||.|+.+||..++...
T Consensus 152 ~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~ 182 (204)
T 3e3r_A 152 EVLRRFLDNFDSSEKDGQVTLAEFQDYYSGV 182 (204)
T ss_dssp HHHHHHHHHHSCSSCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCCcCcHHHHHHHHHHc
Confidence 357889999999 999999999999877543
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.06 E-value=2.4e-10 Score=94.85 Aligned_cols=61 Identities=18% Similarity=0.293 Sum_probs=53.7
Q ss_pred HHHHHHHHhhcC-CCCCC-cccHHHHhhhhcC-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 497 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 497 ~~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
...++.+|+.|| +|++| +|+.+||+.++.. ++ +++++|+.+|.|+||.|+|+||+.+|...
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 357889999999 89997 9999999998864 32 59999999999999999999999998764
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.05 E-value=2.2e-10 Score=95.05 Aligned_cols=61 Identities=20% Similarity=0.230 Sum_probs=55.8
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
..++++|+.||+|++|+|+.+|++.++...+ ++.++++.+|.|+||.|+|+||+.+|....
T Consensus 22 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~~ 86 (110)
T 1iq3_A 22 EYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIV 86 (110)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 4688899999999999999999999998765 699999999999999999999999997654
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.05 E-value=1.8e-10 Score=92.54 Aligned_cols=62 Identities=23% Similarity=0.324 Sum_probs=55.5
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhccc
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASI 559 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~~ 559 (577)
..++++|+.||+|++|+|+.+|++.++...+ ++.++++.+|.|+||.|+|+||+.+|.....
T Consensus 9 ~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~~ 74 (92)
T 1fi6_A 9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVA 74 (92)
T ss_dssp HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
Confidence 4688899999999999999999999987665 5889999999999999999999999976543
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.05 E-value=8.7e-10 Score=97.91 Aligned_cols=97 Identities=12% Similarity=0.160 Sum_probs=79.5
Q ss_pred HHHHHHHHhhc-CCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc---------
Q 008127 456 SRVLEILQAID-CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG--------- 525 (577)
Q Consensus 456 ~~~~~~~~~~D-~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~--------- 525 (577)
.++..+|..+| .|++|.|+.+||..++..... ... ...+..+|+.+|.|++|.|+.+||..++.
T Consensus 13 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~---~~~---~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~ 86 (158)
T 2jnf_A 13 KLLETAFRDFETPEGSGRVSTDQIGIILEVLGI---QQT---KSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNP 86 (158)
T ss_dssp HHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTC---SCS---HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCT
T ss_pred HHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCC---CCC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccch
Confidence 35678999999 999999999999987754321 111 23577899999999999999999998773
Q ss_pred --CcCcHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 526 --LKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 526 --~~~~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
....+..+|+.+|.|++|.|+.+||..++....
T Consensus 87 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g 121 (158)
T 2jnf_A 87 EQMQQELREAFRLYDKEGNGYISTDVMREILAELD 121 (158)
T ss_dssp TTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhC
Confidence 233599999999999999999999999998643
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.2e-10 Score=93.95 Aligned_cols=66 Identities=33% Similarity=0.539 Sum_probs=60.2
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
..++++++|..+|.|++|+|+.+||..+|. .+|..+++.+++.+|+.+|.|++|.|+|+||+.++.
T Consensus 27 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~-~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 27 SEEEIREAFRVEDKDGNGYISAAELRHVMT-NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp CHHHHHHHHHHHCTTCCSCBCHHHHHHHHH-HHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 456789999999999999999999999995 478899999999999999999999999999997653
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.05 E-value=3e-11 Score=100.26 Aligned_cols=71 Identities=21% Similarity=0.267 Sum_probs=62.4
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 485 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~ 485 (577)
.+++++.++++++|+.||+|++|+|+.+||+.+|. .+| ++++++..|++.+|.|+||.|+|+||+.++...
T Consensus 15 ~ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~-~~g--l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~ 85 (110)
T 1iq3_A 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFT-KSK--LSIPELSYIWELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCC-SSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHH-HcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 35677889999999999999999999999999994 455 567789999999999999999999999877543
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.05 E-value=1e-10 Score=95.19 Aligned_cols=67 Identities=16% Similarity=0.187 Sum_probs=59.7
Q ss_pred HHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhh
Q 008127 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 485 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~ 485 (577)
++.++++++|+.||+|+||+|+.+|+..+|.. +| .++.++..|++.+|.|+||.|+|+||+.++...
T Consensus 8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~-~~--l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~ 74 (99)
T 1qjt_A 8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK-SG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRLV 74 (99)
T ss_dssp TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHT-SS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 45678999999999999999999999999954 55 678999999999999999999999999877543
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.3e-10 Score=95.90 Aligned_cols=60 Identities=25% Similarity=0.467 Sum_probs=53.3
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCc-----C------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLK-----G------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-----~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
...++.+|+.||.| +|+|+.+||+.+|... + +++++|+.+|.|+||+|+|+||+.+|.+.
T Consensus 14 ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l 84 (121)
T 4drw_A 14 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 84 (121)
T ss_dssp HHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 35788999999998 8999999999998762 2 49999999999999999999999999764
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.05 E-value=1.8e-10 Score=104.84 Aligned_cols=103 Identities=22% Similarity=0.352 Sum_probs=81.0
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
++..+|..+|.|++|.|+.+||..++............+..+|..+|.|++|.|+.+||..++..... ... ...
T Consensus 48 ~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~---~~~---~~~ 121 (179)
T 2f2o_A 48 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE---KLT---DEE 121 (179)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC-----CCC---HHH
T ss_pred HHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC---CCC---HHH
Confidence 46778999999999999999999988553332344567899999999999999999999987754321 111 235
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcCcC
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGLKG 528 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 528 (577)
+..+|+.+|.|++|.|+.+||..++...+
T Consensus 122 ~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 150 (179)
T 2f2o_A 122 VDEMIREADIDGDGQVNYEEFVQMMTAKG 150 (179)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHSCC--
T ss_pred HHHHHHHcCCCCCCcCcHHHHHHHHHHcC
Confidence 77899999999999999999999887654
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.04 E-value=3.1e-10 Score=106.72 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=82.1
Q ss_pred cccccccCCCCCC-CCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh---cccccHHHHH
Q 008127 423 DQFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL---EEHDSEKWHL 498 (577)
Q Consensus 423 ~~F~~~D~d~dG~-i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~---~~~~~~~~~~ 498 (577)
++|..+|.|++|. |+.+||..++.........++.+..+|+.+|.|++|.|+.+||..++...... ......+...
T Consensus 95 ~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~ 174 (214)
T 2l4h_A 95 RICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ 174 (214)
T ss_dssp HHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHH
T ss_pred HHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHH
Confidence 4688899999999 99999999996533334556789999999999999999999999877654320 0112222233
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcC
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKG 528 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 528 (577)
.+..+|+.+|.|+||.|+.+||..++....
T Consensus 175 ~~~~~~~~~D~d~dG~Is~~EF~~~~~~~p 204 (214)
T 2l4h_A 175 LIDNILEESDIDRDGTINLSEFQHVISRSP 204 (214)
T ss_dssp HHHHHHHHHCCSCCSSBCSHHHHHHHHTCH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHhCh
Confidence 455699999999999999999998886543
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.04 E-value=2.2e-10 Score=102.11 Aligned_cols=100 Identities=15% Similarity=0.229 Sum_probs=81.7
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
.+..+|..+|.|++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++..... ... ...
T Consensus 60 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~---~~~---~~~ 133 (161)
T 3fwb_A 60 EILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGE---TLT---DEE 133 (161)
T ss_dssp HHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC---CCC---HHH
T ss_pred HHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCC---CCC---HHH
Confidence 46778889999999999999999988654444455788999999999999999999999987754321 111 236
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 134 ~~~~~~~~d~~~~g~i~~~eF~~~~~ 159 (161)
T 3fwb_A 134 LRAMIEEFDLDGDGEINENEFIAICT 159 (161)
T ss_dssp HHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 77899999999999999999998764
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.04 E-value=2.8e-10 Score=105.00 Aligned_cols=104 Identities=18% Similarity=0.222 Sum_probs=81.9
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
..+..+|..+|.|++|.|+.+||..++... .......+..+|+.+|.|++|.|+.+||..++..... .....++...
T Consensus 87 ~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~--~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~-~~~l~~~~~~ 163 (191)
T 3k21_A 87 YNFDLLLDQIDSDGSGKIDYTEFIAAALDR--KQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNK-KGNITQRDVN 163 (191)
T ss_dssp TTHHHHHHHHCTTCSSSEEHHHHHHHHSCG--GGCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSS-CSCCCHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHhh--hhccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCC-CCCCCHhHHH
Confidence 466788999999999999999999987332 2466789999999999999999999999987753211 1111111123
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
.+..+|+.+|.|+||.|+.+||..+++
T Consensus 164 ~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 164 RVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp HHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 578899999999999999999998775
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.04 E-value=5.8e-10 Score=92.56 Aligned_cols=98 Identities=14% Similarity=0.125 Sum_probs=75.4
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
++.++|..+| ++|.|+.+||..++.. ......++..+|+.+|.|++|.|+++||..++........... ...
T Consensus 11 e~~~~~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~ 82 (109)
T 1bu3_A 11 DVAAALKACE--AADSFNYKAFFAKVGL---TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALT---DAE 82 (109)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCC---HHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHHc---ChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCC---HHH
Confidence 4556677777 8999999999998842 1345778999999999999999999999987754310011111 135
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 83 ~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 83 TKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 77899999999999999999988764
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=99.04 E-value=1e-10 Score=96.12 Aligned_cols=70 Identities=20% Similarity=0.364 Sum_probs=59.7
Q ss_pred hHHHhhhcccccccc-CCCC-CCCCHHHHHHHHHhhCCCCc-cHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLPWKL-KESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D-~d~d-G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
++++++++++|+.|| .|++ |+|+.+||..+|...+|... ++.+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 18 e~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~ 90 (106)
T 2h2k_A 18 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 90 (106)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 356788999999999 7997 79999999999965467443 3478999999999999999999999987754
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.04 E-value=6.3e-10 Score=92.30 Aligned_cols=98 Identities=17% Similarity=0.188 Sum_probs=75.8
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
++..+|..+| ++|.|+.+||..++.. ......++..+|+.+|.|++|.|+.+||..++........... ...
T Consensus 10 e~~~~~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~ 81 (109)
T 1rwy_A 10 DIKKAIGAFT--AADSFDHKKFFQMVGL---KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLS---AKE 81 (109)
T ss_dssp HHHHHHHTTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCC---HHH
T ss_pred HHHHHHHHcC--CCCcEeHHHHHHHHhc---CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCC---HHH
Confidence 4556677777 8999999999998832 1346789999999999999999999999987764311011111 135
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 82 ~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 82 TKTLMAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 77899999999999999999988764
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=6.1e-10 Score=103.56 Aligned_cols=107 Identities=14% Similarity=0.126 Sum_probs=81.6
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCC----------------CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLP----------------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~----------------~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..+|..+|.|++|.|+.+||..++..... .......+..+|+.+|.|++|.|+.+||..++..
T Consensus 63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 142 (202)
T 2bec_A 63 GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRL 142 (202)
T ss_dssp HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 667899999999999999999999965433 3445678999999999999999999999987764
Q ss_pred hhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC
Q 008127 485 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG 528 (577)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 528 (577)
... ......+....+..+|+.+|.|+||.|+.+||..++...+
T Consensus 143 ~~g-~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 185 (202)
T 2bec_A 143 MVG-VQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMD 185 (202)
T ss_dssp SCC-SCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTSC
T ss_pred hcC-CCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHhC
Confidence 311 1111222222344455559999999999999999887654
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A | Back alignment and structure |
|---|
Probab=99.03 E-value=7.1e-11 Score=95.43 Aligned_cols=70 Identities=27% Similarity=0.400 Sum_probs=61.0
Q ss_pred hHHHhhhcccccccc-CCCCC-CCCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAID-VDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D-~d~dG-~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
++++++++++|+.|| .|++| +|+.+||+.+|... +|..+++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 8 e~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 8 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 456788999999999 89998 99999999999543 355678899999999999999999999999987653
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.03 E-value=1.9e-10 Score=101.25 Aligned_cols=100 Identities=23% Similarity=0.366 Sum_probs=79.0
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
++..+|..+|.|++|.|+.+||..++...........++..+|+.+|.|++|.|+.+||..++..... ... ...
T Consensus 47 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~---~~~---~~~ 120 (148)
T 1exr_A 47 ELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE---KLT---DDE 120 (148)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTC---CCC---HHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCC---CCC---HHH
Confidence 46678889999999999999999887543333345568889999999999999999999987754321 111 135
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 121 ~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 121 VDEMIREADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp HHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 77899999999999999999987764
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.7e-10 Score=93.81 Aligned_cols=60 Identities=18% Similarity=0.242 Sum_probs=54.7
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
.++++|+.||+|++|+|+.+|++.++...+ ++.++++.+|.|+||.|+|+||+.+|....
T Consensus 12 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~~ 75 (99)
T 1qjt_A 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRLVA 75 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence 577899999999999999999999998776 589999999999999999999999997533
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.03 E-value=5.8e-10 Score=92.35 Aligned_cols=98 Identities=16% Similarity=0.153 Sum_probs=74.8
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
++..+|..+| ++|.|+.+||..++.. ......++..+|+.+|.|++|.|+.+||..++........... ...
T Consensus 10 e~~~l~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~ 81 (108)
T 2pvb_A 10 DVAAALAACS--AADSFKHKEFFAKVGL---ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT---DAE 81 (108)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCC---HHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHhC---ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCC---HHH
Confidence 4556677777 8999999999998843 1345788999999999999999999999876654310011111 235
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 82 ~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 82 TKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 77899999999999999999987764
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=99.03 E-value=2.8e-10 Score=92.55 Aligned_cols=62 Identities=23% Similarity=0.331 Sum_probs=53.3
Q ss_pred HHHHHHHHhhcCCCC---CCcccHHHHhhhhcCc-----C------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 497 HLRSQAAFEKFDIDR---DGFITPEELRMHTGLK-----G------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~---~G~I~~~El~~~l~~~-----~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
...++++|+.||+|+ +|+|+.+||+.++... + +++++|+.+|.|+||.|+|+||+.+|....
T Consensus 10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~ 85 (100)
T 3nxa_A 10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGIT 85 (100)
T ss_dssp HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 357889999999964 7999999999988642 1 489999999999999999999999997643
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.02 E-value=5.8e-10 Score=92.39 Aligned_cols=104 Identities=17% Similarity=0.218 Sum_probs=77.7
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..+++++ +.++|..+| ++|.|+.+||..++.. ......++..+|+.+|.|++|.|+.+||..++........
T Consensus 4 ~~~t~~e---~~~~~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~ 75 (108)
T 1rro_A 4 DILSAED---IAAALQECQ--DPDTFEPQKFFQTSGL---SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAR 75 (108)
T ss_dssp GTSCHHH---HHHHHHHTC--STTCCCHHHHHHHHSG---GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSC
T ss_pred ccCCHHH---HHHHHHHcc--CCCCcCHHHHHHHHhc---CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccC
Confidence 3455544 455666677 8999999999998832 1345778999999999999999999999876654311011
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
... ...+..+|+.+|.|++|.|+.+||..++.
T Consensus 76 ~~~---~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 76 ELT---ESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CCC---HHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CCC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 111 23577899999999999999999988764
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.9e-10 Score=114.28 Aligned_cols=109 Identities=19% Similarity=0.316 Sum_probs=82.5
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~ 488 (577)
+...++++ ++.++|..+|.|++|.|+.+||..++...+.....++++..+|+.+|.|++|.|+.+||..++.....
T Consensus 331 LG~~~Tee---EI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe- 406 (440)
T 3u0k_A 331 LGQNPTEA---ELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 406 (440)
T ss_dssp TTCCCCHH---HHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTC-
T ss_pred cCCCCCHH---HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCC-
Confidence 33445554 46678899999999999999999998654444455678999999999999999999999987754321
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcC
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL 526 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 526 (577)
.-.+ ..+..+|+.+|.|+||.|+.+||.++|..
T Consensus 407 --~LSd---eEIdeLfke~D~DgDGkIsyeEFvkmMtS 439 (440)
T 3u0k_A 407 --KLTD---EEVDEMIREADIDGDGQVNYEEFVQMMTA 439 (440)
T ss_dssp --CCCH---HHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred --CCCH---HHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence 1111 35778999999999999999999988753
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.02 E-value=2.4e-10 Score=100.11 Aligned_cols=99 Identities=21% Similarity=0.335 Sum_probs=80.2
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
.+..+|..+|.|++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++..... ... ...
T Consensus 48 ~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~---~~~---~~~ 121 (147)
T 4ds7_A 48 EVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE---KLT---DAE 121 (147)
T ss_dssp HHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC---CCC---HHH
T ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCC---CCC---HHH
Confidence 46778888999999999999999998654344455678999999999999999999999987754321 111 135
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
+..+|+.+| |++|.|+.+||..++.
T Consensus 122 ~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 122 VDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred HHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 778999999 9999999999998775
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.1e-10 Score=93.95 Aligned_cols=69 Identities=13% Similarity=0.363 Sum_probs=64.0
Q ss_pred hHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+++..+++.+|..+|.|++|+|+.+||..+|. .+|..+++.++..++..+|.|++|.|+|+||+.++..
T Consensus 28 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~ 96 (107)
T 2d58_A 28 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLE-KLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLG 96 (107)
T ss_dssp HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 67788999999999999999999999999995 5899999999999999999999999999999987653
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
Probab=99.02 E-value=1.6e-10 Score=127.34 Aligned_cols=118 Identities=15% Similarity=0.221 Sum_probs=95.5
Q ss_pred cccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhh-------cCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 427 AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-------DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 427 ~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~-------D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
.||+|+||.|+..|+...|. ..+ ....+++.+++.+ |.+++|.|+|+||..++.... .. .+
T Consensus 163 ~fd~n~dG~Is~kEl~~~l~-~~~--~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~---~R------~E 230 (816)
T 3qr0_A 163 TTVEMEKNKIPVKAIQKCLS-KDK--DDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL---ER------SE 230 (816)
T ss_dssp HHTSCCSSEEEHHHHHHHHC-SCH--HHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC---CC------TH
T ss_pred hccCCCCCCCCHHHHHHHHH-hcC--ChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC---CH------HH
Confidence 37899999999999999883 232 1235688899888 677899999999998776432 11 25
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcCcC----------------cHHHHHHHhCC--C----CCCcccHHHHHHHHhhc
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGLKG----------------SIDPLLEEADI--D----KDGRISLSEFRRLLRTA 557 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------------~~~~~~~~~D~--d----~dG~i~~~EF~~~l~~~ 557 (577)
++++|+.||.|++|+|+. ||+.+|...+ ++.++++.+|. | ++|.|++++|..+|...
T Consensus 231 I~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S~ 309 (816)
T 3qr0_A 231 IEGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCE 309 (816)
T ss_dssp HHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHSG
T ss_pred HHHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhcc
Confidence 788999999999999999 9999997543 27788988876 5 78999999999999864
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.01 E-value=1.9e-09 Score=95.56 Aligned_cols=105 Identities=12% Similarity=0.102 Sum_probs=82.3
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..+..++ ..+ ..+|.|++|.|+.+||..++...... ......+..+|+.+|.|++|.|+.+||..++.....
T Consensus 43 ~~~~~~~---~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--- 115 (156)
T 1wdc_C 43 NPRNEDV---FAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGE--- 115 (156)
T ss_dssp CCCHHHH---HHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSS---
T ss_pred CCCHHHH---HHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC---
Confidence 3454444 444 77899999999999999998664443 566789999999999999999999999987754321
Q ss_pred cccHHHHHHHHHHHhh--cCCCCCCcccHHHHhhhhcC
Q 008127 491 HDSEKWHLRSQAAFEK--FDIDRDGFITPEELRMHTGL 526 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~--~D~d~~G~I~~~El~~~l~~ 526 (577)
... ...+..+|+. +|.|++|.|+.+||..++..
T Consensus 116 ~~~---~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_C 116 RLS---DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150 (156)
T ss_dssp CCC---HHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred CCC---HHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence 111 1357789999 99999999999999887753
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=99.01 E-value=8.9e-11 Score=87.72 Aligned_cols=62 Identities=27% Similarity=0.378 Sum_probs=56.5
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
++++|..+|.|++|+|+.+||..++.. +|..+++.+++.+|+.+|.|++|.|+|+||+.++.
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHH-ccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 567899999999999999999999954 67788889999999999999999999999997664
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.01 E-value=2.5e-10 Score=101.88 Aligned_cols=102 Identities=21% Similarity=0.288 Sum_probs=80.3
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCc---cHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL---KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 496 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~---~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~ 496 (577)
.+..+|..+|.|++|.|+.+||..++........ ....+..+|+.+|.|++|.|+.+||..++.... ....
T Consensus 57 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g---~~~~--- 130 (162)
T 1top_A 57 ELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG---EHVT--- 130 (162)
T ss_dssp HHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTT---CCCC---
T ss_pred HHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC---CCCC---
Confidence 4567899999999999999999998854221112 456789999999999999999999998775432 1111
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCc
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLK 527 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 527 (577)
...+..+|+.+|.|++|.|+.+||..++...
T Consensus 131 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 1357789999999999999999999887653
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=6.4e-10 Score=101.63 Aligned_cols=105 Identities=14% Similarity=0.136 Sum_probs=80.3
Q ss_pred ccccccCCCCCC-CCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh---cccccHHHHHH
Q 008127 424 QFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL---EEHDSEKWHLR 499 (577)
Q Consensus 424 ~F~~~D~d~dG~-i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~---~~~~~~~~~~~ 499 (577)
+|..+|.|++|. |+.+||..++............+..+|+.+|.|++|.|+.+||..++...... ......+....
T Consensus 65 l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~ 144 (183)
T 1dgu_A 65 ICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQL 144 (183)
T ss_dssp HHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred HHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHH
Confidence 577789999999 99999999986654444556789999999999999999999999877643220 01111111222
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcCcC
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGLKG 528 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 528 (577)
+..+|+.+|.|++|.|+.+||..++....
T Consensus 145 ~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 173 (183)
T 1dgu_A 145 IDNILEESDIDRDGTINLSEFQHVISRSP 173 (183)
T ss_dssp HHHHHHHHCTTSSSEEEHHHHHHHHCSSC
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHhCh
Confidence 34599999999999999999999887654
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.00 E-value=3.6e-10 Score=99.19 Aligned_cols=100 Identities=13% Similarity=0.180 Sum_probs=78.0
Q ss_pred hhccccccc-cCCCCCCCCHHHHHHHHHhh--C---CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccccc
Q 008127 420 DLRDQFDAI-DVDKNGSISLEEMRQALAKD--L---PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 493 (577)
Q Consensus 420 ~l~~~F~~~-D~d~dG~i~~~el~~~l~~~--~---~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~ 493 (577)
++..+|..+ |.|++|.|+.+||..++... . ........+..+|+.+|.|++|.|+.+||..++..... ...
T Consensus 41 ~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~---~~~ 117 (148)
T 1m45_A 41 LVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGE---KLT 117 (148)
T ss_dssp HHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTT---CCC
T ss_pred HHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC---CCC
Confidence 466778899 99999999999999998553 1 33455678999999999999999999999987754321 111
Q ss_pred HHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 494 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 494 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
...+..+|+.+|.|++|.|+.+||..++.
T Consensus 118 ---~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 118 ---DAEVDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp ---HHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred ---HHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 23577899999999999999999998764
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.6e-10 Score=92.72 Aligned_cols=69 Identities=22% Similarity=0.409 Sum_probs=60.6
Q ss_pred hHHHhhhcccccccc-CCCCC-CCCHHHHHHHHHhhCC--CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAID-VDKNG-SISLEEMRQALAKDLP--WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D-~d~dG-~i~~~el~~~l~~~~~--~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
++++.+++++|..|| +|++| +|+.+||..+|...++ . +++.+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~-~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~ 78 (92)
T 2kax_A 6 EKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGE-MKESSIDDLMKSLDKNSDQEIDFKEYSVFLTM 78 (92)
T ss_dssp HHHHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTT-TCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 356788999999999 99999 9999999999965433 4 78889999999999999999999999987754
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1e-09 Score=91.10 Aligned_cols=98 Identities=19% Similarity=0.293 Sum_probs=75.2
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
++..+|..+| ++|.|+.+||..++. + ......++..+|..+|.|++|.|+.+||..++........... ...
T Consensus 11 e~~~~~~~~d--~~g~i~~~ef~~~~~--~-~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~ 82 (110)
T 1pva_A 11 DIKKALDAVK--AEGSFNHKKFFALVG--L-KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT---DAE 82 (110)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHT--C-TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC---HHH
T ss_pred HHHHHHHhcC--CCCcCcHHHHHHHHc--c-CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCC---HHH
Confidence 4556666677 899999999999883 2 2346788999999999999999999999876654311011111 235
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 83 ~~~~~~~~d~~~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 83 TKAFLKAADKDGDGKIGIDEFETLVH 108 (110)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 77899999999999999999988765
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=99.00 E-value=3.5e-10 Score=93.22 Aligned_cols=80 Identities=19% Similarity=0.267 Sum_probs=62.8
Q ss_pred ceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcc
Q 008127 472 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRI 545 (577)
Q Consensus 472 ~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i 545 (577)
.++++++...+..... . ....++.+|+.||+|++|+|+.+||+.++...+ ++..++..+|.|+||.|
T Consensus 5 ~~~~~~~~~~l~~~~~--~-----~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i 77 (105)
T 1wlz_A 5 ATADRDILARLHKAVT--S-----HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRL 77 (105)
T ss_dssp TTCCHHHHHHHHHHHH--H-----THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCB
T ss_pred chhHHHHHHHHHHHHH--c-----hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCC
Confidence 4667777765543211 1 124678899999999999999999999997766 48999999999999999
Q ss_pred cHHHHHHHHhhcc
Q 008127 546 SLSEFRRLLRTAS 558 (577)
Q Consensus 546 ~~~EF~~~l~~~~ 558 (577)
+|+||+.+|....
T Consensus 78 ~~~eF~~~~~~~~ 90 (105)
T 1wlz_A 78 KYPDFLSRFSSET 90 (105)
T ss_dssp CHHHHHHHHC---
T ss_pred cHHHHHHHHhccC
Confidence 9999999997643
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.00 E-value=3.7e-10 Score=84.51 Aligned_cols=57 Identities=30% Similarity=0.518 Sum_probs=52.4
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.++..
T Consensus 3 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 56799999999999999999999998766 4899999999999999999999999875
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.00 E-value=1e-09 Score=100.96 Aligned_cols=97 Identities=21% Similarity=0.261 Sum_probs=79.8
Q ss_pred HHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------c
Q 008127 456 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------S 529 (577)
Q Consensus 456 ~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~ 529 (577)
.++..+|..+|.|++|.|+++||..++..... ... ...+..+|+.+|.|++|.|+.+||..++.... .
T Consensus 10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~---~~~---~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~ 83 (188)
T 1s6i_A 10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGS---ELM---ESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREEN 83 (188)
T ss_dssp CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTC---CCC---HHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCS
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCC---CCC---HHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHH
Confidence 35788999999999999999999987754321 111 13577899999999999999999998775442 5
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 530 IDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 530 ~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
+..+|+.+|.|+||.|+.+||..++....
T Consensus 84 l~~~F~~~D~d~dG~Is~~El~~~l~~~g 112 (188)
T 1s6i_A 84 LVSAFSYFDKDGSGYITLDEIQQACKDFG 112 (188)
T ss_dssp THHHHHHTTTTCSSEEEHHHHHHTTTTTT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHcC
Confidence 89999999999999999999999987543
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=98.99 E-value=3.9e-10 Score=87.05 Aligned_cols=61 Identities=26% Similarity=0.447 Sum_probs=55.2
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
...++.+|+.||+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.++...
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 72 (77)
T 2joj_A 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEK 72 (77)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHH
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 35688899999999999999999999998776 48899999999999999999999998753
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=98.99 E-value=4.4e-10 Score=92.32 Aligned_cols=61 Identities=18% Similarity=0.324 Sum_probs=53.1
Q ss_pred HHHHHHHHhhcC-CCCC-CcccHHHHhhhhcC-c-------CcHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 497 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-K-------GSIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 497 ~~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-~-------~~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
...++.+|+.|| +|++ |+|+.+||+.++.. . .+++++|+.+|.|+||.|+|+||+.+|...
T Consensus 21 ~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 21 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 357889999999 7997 79999999998853 2 269999999999999999999999998754
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=96.42 Aligned_cols=101 Identities=17% Similarity=0.251 Sum_probs=79.1
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCc----cHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 495 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~----~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~ 495 (577)
++..+|..+|.|++|.|+.+||..++........ ....+..+|+.+|.|++|.|+.+||..++...... ...
T Consensus 48 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~--~~~-- 123 (153)
T 3ox6_A 48 ELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGH--QVG-- 123 (153)
T ss_dssp HHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSS--CCC--
T ss_pred HHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcC--CCC--
Confidence 4567888899999999999999998854322222 25778999999999999999999999877542111 111
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 496 WHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 496 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
...+..+|+.+|.|++|.|+.+||..++.
T Consensus 124 -~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 124 -HRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp -HHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred -HHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 13577899999999999999999998774
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-10 Score=90.24 Aligned_cols=66 Identities=24% Similarity=0.456 Sum_probs=59.8
Q ss_pred HHHhhhccccccccCCCCCCCCHHHHHHHHHhhCC-CCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
+..++++ +|..+|.|++|+|+.+||..+| ..+| ..+++.++..+|..+|.|++|.|+|+||+.++.
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l-~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 72 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIM-QKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 72 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHS-STTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHH-HHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 4456789 9999999999999999999999 4588 889999999999999999999999999998764
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=98.99 E-value=5.1e-10 Score=115.30 Aligned_cols=127 Identities=20% Similarity=0.248 Sum_probs=96.0
Q ss_pred cccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHH
Q 008127 425 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 504 (577)
Q Consensus 425 F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F 504 (577)
++.+|.+.+|.|...++.......+ ......++..+|..+|.|+||.|+.+||..++..... ... ...+..+|
T Consensus 282 ~k~iD~de~g~i~~~e~~~~~~~~l-s~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~---~~s---~eel~~Lf 354 (450)
T 3sg6_A 282 LKGIDFKEDGNILGHKLEYNTRDQL-TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPT---EAELQDMI 354 (450)
T ss_dssp EEEESCCTTSTTTTTCBCCC---CC-CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC---CCC---HHHHHHHH
T ss_pred cccCCccccccchhhhhhhhhcccC-CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC---CCC---HHHHHHHH
Confidence 3557899999998877643221111 1112357888999999999999999999987754321 111 23577899
Q ss_pred hhcCCCCCCcccHHHHhhhhcCcC-------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 505 EKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 505 ~~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
+.+|.|++|.|+.+||..++.... .+..+|+.+|.|+||.|+.+||..+|....
T Consensus 355 ~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG 415 (450)
T 3sg6_A 355 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 415 (450)
T ss_dssp HTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT
T ss_pred HHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhC
Confidence 999999999999999998876432 388899999999999999999999998754
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1e-10 Score=91.87 Aligned_cols=69 Identities=25% Similarity=0.406 Sum_probs=60.4
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCC--CCccHHHHHH----HHHhhcCCCCcceehhhHHHHHh
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP--WKLKESRVLE----ILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~--~~~~~~~~~~----~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
+++..++++.+|..+|.|++|+|+.+||..++.. +| ..+++.++.. +|..+|.|++|.|+|+||+..+.
T Consensus 2 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~ 76 (83)
T 1yx7_A 2 ACKVKAELEAAFKKLDANGDGYVTALELQTFMVT-LDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANA 76 (83)
T ss_dssp CSCSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHH-HTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-HccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhH
Confidence 3455678999999999999999999999999954 67 7788888888 99999999999999999996543
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=98.98 E-value=5.8e-10 Score=89.91 Aligned_cols=59 Identities=34% Similarity=0.572 Sum_probs=54.0
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.||+|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+.+|..
T Consensus 29 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93 (94)
T ss_dssp HHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 4688899999999999999999999987766 4899999999999999999999999864
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.98 E-value=3.6e-10 Score=85.69 Aligned_cols=59 Identities=44% Similarity=0.701 Sum_probs=54.0
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.+|+|++|+|+.+||+.++...+ ++..++..+|.|+||.|+|+||+.++..
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp HHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 3678899999999999999999999998876 4899999999999999999999998863
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1.6e-10 Score=93.02 Aligned_cols=69 Identities=20% Similarity=0.405 Sum_probs=61.0
Q ss_pred HHHhhhccccccccC-CCCC-CCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAIDV-DKNG-SISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~-d~dG-~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+...+++.+|..||. |++| +|+..||..+|.+.+|..++..+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 7 ~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~ 77 (93)
T 1xk4_A 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 456789999999999 9999 99999999999545787677788999999999999999999999987653
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.2e-10 Score=85.55 Aligned_cols=56 Identities=25% Similarity=0.504 Sum_probs=51.3
Q ss_pred HHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 501 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 501 ~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
+.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.++..
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 4589999999999999999999998765 5889999999999999999999999875
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=98.98 E-value=7.7e-10 Score=102.55 Aligned_cols=96 Identities=19% Similarity=0.222 Sum_probs=70.7
Q ss_pred HHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------c
Q 008127 456 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------S 529 (577)
Q Consensus 456 ~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~ 529 (577)
..+..+|..+|.|++|.|+++||..++...... .. ...+..+|+.+|.|++|.|+.+||..++.... .
T Consensus 57 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~--~~----~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~ 130 (197)
T 3pm8_A 57 NNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQ--KI----PPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEV 130 (197)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----------CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCC--CC----HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHH
Confidence 456789999999999999999999877643211 11 13577899999999999999999988775443 4
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 530 IDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 530 ~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
+..+|+.+|.|++|.|+.+||..++...
T Consensus 131 l~~~F~~~D~d~~G~Is~~El~~~l~~~ 158 (197)
T 3pm8_A 131 CLIPFKFFDIDGNGKISVEELKRIFGRD 158 (197)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHC--
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 8889999999999999999999999865
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.6e-09 Score=97.10 Aligned_cols=97 Identities=21% Similarity=0.227 Sum_probs=78.5
Q ss_pred HHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------c
Q 008127 456 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------S 529 (577)
Q Consensus 456 ~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~ 529 (577)
..+..+|..+|.|++|.|+++||..++..... .... ..+..+|+.+|.|++|.|+.+||..++.... .
T Consensus 27 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~---~~~~---~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 100 (166)
T 2aao_A 27 AGLKEMFNMIDADKSGQITFEELKAGLKRVGA---NLKE---SEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDH 100 (166)
T ss_dssp HHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTC---CCCH---HHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHH
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCC---CCCH---HHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHH
Confidence 35678999999999999999999987654311 1111 2577899999999999999999998875542 4
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 530 IDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 530 ~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
+..+|+.+|.|++|.|+.+||..++....
T Consensus 101 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~~ 129 (166)
T 2aao_A 101 LFAAFTYFDKDGSGYITPDELQQACEEFG 129 (166)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHTCC--
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 88899999999999999999999987654
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A | Back alignment and structure |
|---|
Probab=98.97 E-value=6.8e-10 Score=89.61 Aligned_cols=59 Identities=20% Similarity=0.329 Sum_probs=51.8
Q ss_pred HHHHHHHhhcC-CCC-CCcccHHHHhhhhcC-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 498 LRSQAAFEKFD-IDR-DGFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 498 ~~~~~~F~~~D-~d~-~G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.|| +|+ +|+|+.+||+.++.. ++ +++++|+.+|.|+||.|+|+||+.+|..
T Consensus 9 ~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 46888999999 798 589999999998864 23 4899999999999999999999999875
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A | Back alignment and structure |
|---|
Probab=98.96 E-value=4.7e-10 Score=96.27 Aligned_cols=66 Identities=23% Similarity=0.350 Sum_probs=59.6
Q ss_pred HHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhh
Q 008127 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 485 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~ 485 (577)
++.++++++|+.|| |+||+|+.+|++.+|.+ ++ +++.++..|++.+|.|+||.|+|+||+.+|..+
T Consensus 48 ~e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~-~g--l~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li 113 (139)
T 2jq6_A 48 KDKPTYDEIFYTLS-PVNGKITGANAKKEMVK-SK--LPNTVLGKIWKLADVDKDGLLDDEEFALANHLI 113 (139)
T ss_dssp GTHHHHHHHHHHSC-CSSSEEEHHHHHHHHHH-TT--CCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-CCCCeECHHHHHHHHHH-hC--cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 56788999999999 99999999999999965 55 678999999999999999999999999887643
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=98.96 E-value=6.7e-10 Score=90.30 Aligned_cols=60 Identities=17% Similarity=0.281 Sum_probs=52.8
Q ss_pred HHHHHHHhhcC-CCCCC-cccHHHHhhhhcC-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++.+|+.|| +|++| +|+.+||+.++.. ++ +++++|+.+|.|+||.|+|+||+.+|...
T Consensus 10 ~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 10 DALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 46889999997 89998 9999999998864 33 48999999999999999999999998753
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A | Back alignment and structure |
|---|
Probab=98.96 E-value=3.8e-10 Score=90.75 Aligned_cols=70 Identities=27% Similarity=0.419 Sum_probs=62.1
Q ss_pred hHHHhhhcccccccc-CCCCC-CCCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAID-VDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D-~d~dG-~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
++++.+++.+|..+| .|++| +|+..||..+|... +|..+++.+++.+|..+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 80 (93)
T 1k2h_A 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 346778999999999 79999 99999999999532 678899999999999999999999999999987653
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=98.95 E-value=9.8e-10 Score=87.71 Aligned_cols=61 Identities=33% Similarity=0.502 Sum_probs=55.4
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
...++.+|+.||+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.++...
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~ 85 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 45788999999999999999999999998766 48999999999999999999999998763
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=7.3e-10 Score=88.72 Aligned_cols=60 Identities=27% Similarity=0.414 Sum_probs=54.9
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
...++.+|+.||+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.++..
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 45788999999999999999999999987766 5899999999999999999999999875
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=98.95 E-value=1.1e-09 Score=89.87 Aligned_cols=61 Identities=20% Similarity=0.302 Sum_probs=54.8
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
...++++|+.||+ +||+|+.+|++.++...+ ++.++++.+|.|+||.|+|+||+.+|....
T Consensus 14 ~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~~ 78 (106)
T 1eh2_A 14 KAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVY 78 (106)
T ss_dssp HHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 3467889999999 999999999999998777 589999999999999999999999987543
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=98.95 E-value=5.6e-10 Score=98.89 Aligned_cols=64 Identities=14% Similarity=0.270 Sum_probs=59.4
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
.+.++.+|+.||.|++|+|+.+||+.+|. .+|..+++++++.|++.+|.| ||.|+|+||+.+|.
T Consensus 84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~-~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~ 147 (153)
T 3i5g_B 84 EDALRNAFSMFDEDGQGFIPEDYLKDLLE-NMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKG 147 (153)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHH-SSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHH
T ss_pred HHHHHHHHhccccCCCCeEeHHHHHHHHH-HcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhc
Confidence 35789999999999999999999999995 589999999999999999988 99999999998775
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=1e-09 Score=91.35 Aligned_cols=62 Identities=21% Similarity=0.347 Sum_probs=54.7
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
...++.+|+.||+|++|+|+.+||+.++...+ ++..+++.+|.|+||.|+|+||+.+|....
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~ 78 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLID 78 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence 34688899999999999999999999987433 589999999999999999999999987644
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=98.95 E-value=7.2e-10 Score=98.90 Aligned_cols=66 Identities=21% Similarity=0.407 Sum_probs=60.1
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcC--CCCcceehhhHHHHHhh
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC--NTDGLVDFSEFVAATLH 484 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~--d~dg~i~f~EF~~~~~~ 484 (577)
.++++++|+.||.|++|+|+.+||+.+|. .+|..+++++++.|++.+|. |+||.|+|+||+.+|..
T Consensus 84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~-~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~ 151 (159)
T 3i5g_C 84 ADEFMEAFKTFDREGQGLISSAEIRNVLK-MLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151 (159)
T ss_dssp HHHHHHHHHHHCTTSSSEECHHHHHHHHH-HSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHC
Confidence 45688999999999999999999999995 59999999999999999995 88999999999987753
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=98.93 E-value=1.1e-09 Score=87.87 Aligned_cols=59 Identities=20% Similarity=0.372 Sum_probs=52.5
Q ss_pred HHHHHHHhhcCCCCCC---cccHHHHhhhhcC-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFDIDRDG---FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G---~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++.+|+.|| ++|| +|+.+||+.++.. ++ +++++|+.+|.|+||.|+|+||+.+|...
T Consensus 9 ~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 9 VALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 46888999999 7766 9999999999887 55 48999999999999999999999998764
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.5e-09 Score=85.76 Aligned_cols=61 Identities=31% Similarity=0.483 Sum_probs=55.4
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-----cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
...++.+|+.+|+|++|+|+.+||+.++...| ++..+++.+|.|+||.|+|+||+.++...
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 45788999999999999999999999987765 58999999999999999999999999764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 577 | ||||
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 3e-82 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 5e-80 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-78 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 3e-78 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-77 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-76 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-74 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 3e-73 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 6e-73 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 9e-73 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-71 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-71 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 4e-71 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 4e-68 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 7e-67 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 8e-67 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 6e-66 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 8e-66 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 6e-64 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-60 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 4e-60 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 5e-60 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-59 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 1e-58 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-58 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 1e-57 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 3e-57 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-56 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-56 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 3e-56 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 4e-56 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-55 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-55 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 3e-55 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-54 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 6e-53 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 9e-53 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-52 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 6e-52 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-51 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 5e-51 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 5e-51 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 7e-51 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 8e-51 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 8e-51 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-50 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-50 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 2e-50 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 6e-50 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-49 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 8e-49 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-48 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 5e-48 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 9e-47 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-46 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 4e-44 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-42 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-42 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 4e-42 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 1e-41 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 6e-41 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 3e-40 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 5e-21 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 2e-06 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 4e-20 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 1e-19 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 5e-19 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 1e-18 | |
| d1dtla_ | 156 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-18 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 2e-18 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 5e-04 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 1e-17 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 2e-16 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 3e-16 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 9e-04 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 0.004 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 6e-16 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 8e-09 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 8e-16 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 8e-16 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 3e-15 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 3e-15 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 4e-04 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 6e-15 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 8e-09 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 6e-15 | |
| d1s6ia_ | 182 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 2e-14 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 5e-14 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 6e-14 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 1e-13 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 3e-13 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 3e-13 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 1e-08 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 1e-12 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 1e-12 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 1e-08 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 2e-12 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 1e-06 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 3e-12 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 2e-10 | |
| d1auib_ | 165 | a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch | 4e-12 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 9e-12 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 1e-11 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 2e-11 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 1e-11 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 5e-10 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 2e-11 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 2e-08 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 3e-11 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-07 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 4e-11 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 5e-09 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 6e-11 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 3e-06 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 1e-10 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 3e-10 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 1e-10 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 1e-06 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 1e-10 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 1e-10 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 6e-10 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 0.001 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 4e-10 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 2e-08 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 4e-10 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 3e-09 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 4e-04 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 4e-10 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 3e-08 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 0.002 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 1e-09 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 1e-07 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 3e-07 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 2e-09 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-08 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 0.003 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 2e-09 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 2e-05 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 2e-09 | |
| d1wdcb_ | 142 | a.39.1.5 (B:) Myosin Essential Chain {Bay scallop | 3e-09 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 4e-09 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 5e-09 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 1e-07 | |
| d1wdcc_ | 152 | a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop | 6e-09 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 9e-09 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 7e-08 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-08 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 3e-04 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 2e-08 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 3e-08 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 0.002 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 5e-08 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 5e-07 | |
| d1ggwa_ | 140 | a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo | 6e-08 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 9e-08 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 8e-06 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-07 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 3e-07 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 1e-04 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 3e-07 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 2e-05 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 7e-07 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 0.002 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 1e-06 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 0.002 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 1e-06 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 4e-06 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 0.001 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 5e-06 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 0.004 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 1e-05 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 3e-05 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 2e-04 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 5e-05 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 8e-05 | |
| d1qlsa_ | 95 | a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), | 1e-04 | |
| d3cr5x1 | 90 | a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru | 1e-04 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 2e-04 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 2e-04 | |
| d1sraa_ | 151 | a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPAR | 3e-04 | |
| d1j55a_ | 94 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 5e-04 | |
| d1xk4c1 | 83 | a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sa | 0.002 | |
| d2hf5a1 | 33 | a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien | 0.003 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 257 bits (658), Expect = 3e-82
Identities = 115/313 (36%), Positives = 165/313 (52%), Gaps = 22/313 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D Y +LG G F +A DK VA+K I K + ++ E+ +L
Sbjct: 5 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIAVLH 62
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
+ H N+V + +E ++Y+ M+L GGEL DRI + Y
Sbjct: 63 KIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-----------------VEKGFY 104
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
TE+DA+ ++ Q+L H G+VHRD+KPEN L+ S EDS + +DFGLS PG
Sbjct: 105 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 164
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
G+ YVAPEVL +K D WSIGVI YILLCG PF+D+ + +F+++L+
Sbjct: 165 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA 224
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN 390
+ +F W IS+SAKDF++ L+ KDP R T QAL HPW+ G A + I SV
Sbjct: 225 EYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSE 283
Query: 391 NMRQFVKYSRLKQ 403
+++ S+ KQ
Sbjct: 284 QIKKNFAKSKWKQ 296
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 253 bits (648), Expect = 5e-80
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 22/302 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y I + LG G FG + +KA G K I P+ VK E+ I+ L H
Sbjct: 30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLH-H 85
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
++ ++AFED + + +E GGEL DRI +D + +E +
Sbjct: 86 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIA----------------AEDYKMSEAEV 129
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+RQ H H +VH D+KPEN + K+ SS+K DFGL+ + P + +
Sbjct: 130 INYMRQACEGLKHMHEHSIVHLDIKPENIMC-ETKKASSVKIIDFGLATKLNPDEIVKVT 188
Query: 277 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
+A + APE++ R+ G +D+W+IGV+ Y+LL G PF + + + V R +F
Sbjct: 189 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 248
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQF 395
+ S+S AKDF+K LL K+PR RLT AL HPW++ I S N +RQ
Sbjct: 249 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQK 308
Query: 396 VK 397
+K
Sbjct: 309 IK 310
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 248 bits (635), Expect = 3e-78
Identities = 95/291 (32%), Positives = 150/291 (51%), Gaps = 25/291 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y I + LG G FG + T++A G+ A K + E V++E++ + L H
Sbjct: 27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES---DKETVRKEIQTMSVLR-H 82
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+V ++AFEDDN + + E GGEL +++ + ++ +E +A
Sbjct: 83 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV----------------ADEHNKMSEDEA 126
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
+RQ+ + H + VH D+KPEN +F + K + LK DFGL+ + P + +
Sbjct: 127 VEYMRQVCKGLCHMHENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSVKVT 185
Query: 277 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+A + APEV + K G +D+WS+GV++YILL G PF + +D + V +
Sbjct: 186 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 245
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG---GDASEIP 383
+ IS KDF++KLL+ DP R+T QAL HPW+ G G S+IP
Sbjct: 246 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 296
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 246 bits (628), Expect = 3e-78
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 33/295 (11%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM------ILPIAVEDVKREV 147
F Y ++LG G K AVK I+ + E +EV
Sbjct: 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 60
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
IL+ ++GH N+++ + +E + + ++ +L + GEL D + +
Sbjct: 61 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-----------------TE 103
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+EK+ ++R +L V H +VHRD+KPEN L +D ++K TDFG S +
Sbjct: 104 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQL 160
Query: 268 KPGKKFQDIVGSAYYVAPEVL-------KRKSGPESDVWSIGVITYILLCGRRPFWDKTE 320
PG+K +++ G+ Y+APE++ G E D+WS GVI Y LL G PFW + +
Sbjct: 161 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 220
Query: 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+ + ++ F W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 221 MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 246 bits (628), Expect = 1e-77
Identities = 81/322 (25%), Positives = 149/322 (46%), Gaps = 27/322 (8%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
K+ +Y I + LG G+FG + + ++ K ++ VK+E+ IL
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----DQVLVKKEISILN 56
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
H N++ + +FE + + E G ++ +RI
Sbjct: 57 IA-RHRNILHLHESFESMEELVMIFEFISGLDIFERI----------------NTSAFEL 99
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
E++ V Q+ H H + H D++PEN ++ + S++K +FG + +KPG
Sbjct: 100 NEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQLKPGD 158
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
F+ + + Y APEV + +D+WS+G + Y+LL G PF +T I + ++
Sbjct: 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNA 218
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN 390
+ F + + IS A DFV +LLVK+ ++R+TA++AL HPW+++ + + V+
Sbjct: 219 EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE----RVSTKVIR 274
Query: 391 NMRQFVKYSRLKQFALRALAST 412
++ Y L + L + S
Sbjct: 275 TLKHRRYYHTLIKKDLNMVVSA 296
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 243 bits (622), Expect = 2e-76
Identities = 88/348 (25%), Positives = 155/348 (44%), Gaps = 33/348 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
+ D ++LG G G +K ++ A+K ++ +REV++
Sbjct: 7 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA--------RREVELH 58
Query: 151 QALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIR 206
+ ++V+ + +E+ + I ME +GGEL RI R
Sbjct: 59 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------R 103
Query: 207 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 266
D +TE++A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 104 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 163
Query: 267 IKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE----D 321
+ YYVAPEVL + D+WS+GVI YILLCG PF+
Sbjct: 164 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 223
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 381
G+ + + +F W +S K ++ LL +P R+T + ++HPW+ + +
Sbjct: 224 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 283
Query: 382 IPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAID 429
P+ S + + ++ +K+ ALA+ D E ++ DA +
Sbjct: 284 TPLHTSRVLKEDKE-RWEDVKEEMTSALATMRVDYEQIKIKKIEDASN 330
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 236 bits (602), Expect = 2e-74
Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 27/280 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I L H
Sbjct: 7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 65
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+++ Y F D VY+ +E G + ++K S++ E+
Sbjct: 66 PNILRLYGYFHDATRVYLILEYAPLGTVYRE-----------------LQKLSKFDEQRT 108
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
A + ++ + CH ++HRD+KPEN L S LK DFG S P + +
Sbjct: 109 ATYITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHA-PSSRRTTL 164
Query: 277 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ Y+ PE+++ + + D+WS+GV+ Y L G+ PF T +K + R + F
Sbjct: 165 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF- 223
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
++ A+D + +LL +P R + L HPW+
Sbjct: 224 ---PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 234 bits (597), Expect = 3e-73
Identities = 96/289 (33%), Positives = 151/289 (52%), Gaps = 23/289 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---PIAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
IL+ + H NV+ + +E+ V + +EL GGEL D + +
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL-----------------AEK 107
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGLSDFI 267
TE++A ++Q+L H + H D+KPEN + +K DFGL+ I
Sbjct: 108 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 268 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326
G +F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 227
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
V +F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 228 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 233 bits (595), Expect = 6e-73
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 28/293 (9%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + E + E+ +++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRE 73
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+ N+V + +++ + +++ ME GG L D + ++
Sbjct: 74 N-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD------------------VVTETCMD 114
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGK 271
E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQS 171
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383
+ +S +DF+ + L D R +A + L H +++ S +
Sbjct: 232 GT-PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLT 283
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 233 bits (595), Expect = 9e-73
Identities = 78/322 (24%), Positives = 138/322 (42%), Gaps = 33/322 (10%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
+ D ++ ++ + +GHG FG Y A D N + VA+KK+ + +D+ +EV+
Sbjct: 9 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRF 68
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
LQ L H N +++ + ++ ++ ME C G L
Sbjct: 69 LQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSAS-----------------DLLEVHKK 110
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
E + A V L+ A H H ++HRD+K N L E +K DFG + + P
Sbjct: 111 PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAP 167
Query: 270 GKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325
F VG+ Y++APEV+ + + + DVWS+G+ L + P ++
Sbjct: 168 ANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY 224
Query: 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 385
+ +N+ S ++FV L K P+ R T+ L H +V + I
Sbjct: 225 HIAQNES--PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDL 282
Query: 386 IS-VLNNMRQF--VKYSRLKQF 404
I + +R+ ++Y ++K+
Sbjct: 283 IQRTKDAVRELDNLQYRKMKKI 304
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 229 bits (584), Expect = 1e-71
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 29/288 (10%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 60
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
HENVVKFY + N Y+ +E C GGEL DRI D E
Sbjct: 61 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPE 102
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG--- 270
DA Q++ H G+ HRD+KPEN L +LK +DFGL+ +
Sbjct: 103 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE---RDNLKISDFGLATVFRYNNRE 159
Query: 271 KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
+ + G+ YVAPE+LKR+ DVWS G++ +L G P+ ++
Sbjct: 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 219
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376
+ K + PW I ++ + K+LV++P AR+T W +
Sbjct: 220 KEKKTYL-NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 229 bits (584), Expect = 2e-71
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 31/295 (10%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D + + + I LG G FG Y A +K A K I+ +ED E+ IL
Sbjct: 7 DLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDIL 63
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+ H N+VK +AF +N ++I +E C GG + + + +
Sbjct: 64 ASCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM----------------LELERP 106
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 269
TE VV +Q L H + ++HRD+K N LF D +K DFG+S +
Sbjct: 107 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRT 163
Query: 270 GKKFQDIVGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323
++ +G+ Y++APEV+ R ++DVWS+G+ + P + +
Sbjct: 164 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 223
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378
++ +++P +P S++ KDF+KK L K+ AR T +Q L HP+V +
Sbjct: 224 LLKIAKSEPPTLAQP-SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 277
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 227 bits (581), Expect = 4e-71
Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 29/283 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 67
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
VK Y F+DD +Y + + GELL IRK + E
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKY-----------------IRKIGSFDETCT 110
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 273
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 111 RFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA 167
Query: 274 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
VG+A YV+PE+L KS SD+W++G I Y L+ G PF E IF+++++ +
Sbjct: 168 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 227
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
DF A+D V+KLLV D RL + + ++
Sbjct: 228 DF----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 266
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 221 bits (564), Expect = 4e-68
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 27/282 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + K+LG G FG ++A K A+K ++K+ +++ VE E ++L H
Sbjct: 3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + F+ ++ ME GG+L+ I+ ++ A
Sbjct: 63 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYH-----------------IQSCHKFDLSRA 105
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQD 275
+++ H G+V+RD+K +N L +D +K DFG+ + + K
Sbjct: 106 TFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNT 162
Query: 276 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334
G+ Y+APE+L + D WS GV+ Y +L G+ PF + E+ +F + + P +
Sbjct: 163 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY 222
Query: 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-LSHPWVRE 375
+ AKD + KL V++P RL HP RE
Sbjct: 223 ----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 260
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 216 bits (551), Expect = 7e-67
Identities = 70/285 (24%), Positives = 126/285 (44%), Gaps = 30/285 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + +G G +G K++G + K+++ M + + EV +L+ L H
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELK-HP 63
Query: 158 NVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
N+V++Y+ D + +YI ME CEGG+L I ++ E+
Sbjct: 64 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-------------TKGTKERQYLDEEF 110
Query: 216 AAVVVRQMLRVAAECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
V+ Q+ ECH H ++HRD+KP N ++K DFGL+ +
Sbjct: 111 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLGDFGLARILNHD 167
Query: 271 KKF-QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
F + VG+ YY++PE + R S +SD+WS+G + Y L PF ++ + ++
Sbjct: 168 TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 227
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373
K R+ S+ + + ++L R + + L +P +
Sbjct: 228 EGKF---RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 216 bits (551), Expect = 8e-67
Identities = 69/284 (24%), Positives = 113/284 (39%), Gaps = 24/284 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G++LG G ++A D VAVK + + P +RE + AL H
Sbjct: 8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NH 66
Query: 157 ENVVKFYNAFEDDN----YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+V Y+ E + YI ME +G L D + + T
Sbjct: 67 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV-----------------HTEGPMT 109
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG-LSDFIKPGK 271
K A V+ + H +G++HRD+KP N + + + ++D
Sbjct: 110 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 169
Query: 272 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
+ ++G+A Y++PE + S SDV+S+G + Y +L G PF + + + +R
Sbjct: 170 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 229
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
P +S V K L K+P R A + VR
Sbjct: 230 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 214 bits (545), Expect = 6e-66
Identities = 54/286 (18%), Positives = 107/286 (37%), Gaps = 31/286 (10%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
R +G G F Y D VA +++ K+ + K E ++L+ L
Sbjct: 9 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQ- 66
Query: 156 HENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
H N+V+FY+++E + + EL G L + ++
Sbjct: 67 HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL-----------------KRFKVM 109
Query: 212 TEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
K RQ+L+ H ++HRD+K +N S+K D GL+ K
Sbjct: 110 KIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATL-KR 166
Query: 270 GKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVL 328
+ ++G+ ++APE+ + K DV++ G+ + P+ + I++ V
Sbjct: 167 ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT 226
Query: 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374
K+ ++ + ++ R + L+H + +
Sbjct: 227 SGVKPAS--FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 213 bits (544), Expect = 8e-66
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 35/288 (12%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKIL 150
+ +Y +G LLG G FG Y ++ VA+K +EK+++ + + V EV +L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 151 QAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
+ + +G V++ + FE + + +E E + L I +
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF----------------ITERG 105
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
E+ A Q+L CH G++HRD+K EN L LK DFG +K
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSGALLKD 163
Query: 270 GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
+ D G+ Y PE + R G + VWS+G++ Y ++CG PF E+
Sbjct: 164 -TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EI 216
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375
+R + FR +S+ + ++ L P R T + +HPW+++
Sbjct: 217 IRGQVFFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 210 bits (536), Expect = 6e-64
Identities = 70/321 (21%), Positives = 113/321 (35%), Gaps = 66/321 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ LG G G + + K +G +A K I P + RE+++L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECN-S 63
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+V FY AF D + I ME +GG L + +K R E+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----------------KKAGRIPEQIL 106
Query: 217 AVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 275
V +++ H ++HRD+KP N L S +K DFG+S +
Sbjct: 107 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS---RGEIKLCDFGVSGQLIDSMA-NS 162
Query: 276 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRNK 331
VG+ Y++PE L+ +SD+WS+G+ + GR P +F +
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD 222
Query: 332 PDF-------------------------------------RRKPWPSISNSAKDFVKKLL 354
+ P S +DFV K L
Sbjct: 223 AAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCL 282
Query: 355 VKDPRARLTAAQALSHPWVRE 375
+K+P R Q + H +++
Sbjct: 283 IKNPAERADLKQLMVHAFIKR 303
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 201 bits (511), Expect = 2e-60
Identities = 68/284 (23%), Positives = 124/284 (43%), Gaps = 33/284 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I + LG G FG ++ + NG A+K ++K ++ VE E +L + H
Sbjct: 6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THP 64
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+++ + F+D +++ M+ EGGEL + R+ A
Sbjct: 65 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ-----------------RFPNPVAK 107
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 277
++ H +++RD+KPEN L ++ +K TDFG + ++ +
Sbjct: 108 FYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVP--DVTYTLC 162
Query: 278 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
G+ Y+APEV+ + D WS G++ Y +L G PF+D ++++L + F
Sbjct: 163 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF-- 220
Query: 337 KPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 375
P + KD + +L+ +D RL +HPW +E
Sbjct: 221 --PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 262
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 201 bits (512), Expect = 4e-60
Identities = 61/288 (21%), Positives = 113/288 (39%), Gaps = 31/288 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA-- 154
+++ +++G G FG Y G A+K ++K ++ + E +L ++
Sbjct: 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
+V AF + + ++L GG+L + + ++E
Sbjct: 65 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYH-----------------LSQHGVFSEA 107
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 274
D +++ H +V+RD+KP N L E ++ +D GL+ K
Sbjct: 108 DMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHA 164
Query: 275 DIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332
VG+ Y+APEVL++ +D +S+G + + LL G PF E+ R
Sbjct: 165 -SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTL 222
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVRE 375
+ S S + ++ LL +D RL A + P+ R
Sbjct: 223 TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 200 bits (510), Expect = 5e-60
Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 32/285 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ KLLG G FG + +KA G A+K + K +I V E ++LQ H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHP 65
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+ AF+ + + ME GGEL + ++ +TE+ A
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFH-----------------LSRERVFTEERAR 108
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDI 276
+++ H +V+RD+K EN + +D +K TDFGL G +
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTF 165
Query: 277 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF- 224
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 375
++S AK + LL KDP+ RL A + + H +
Sbjct: 225 ---PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 197 bits (503), Expect = 1e-59
Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 34/283 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ T+G+ +G G FG Y VAVK + P ++ K EV +L+ H
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPT-PQQLQAFKNEVGVLRKTR-H 63
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N++ F + + I + CEG L + ++++
Sbjct: 64 VNILLFM-GYSTAPQLAIVTQWCEGSSLYHHL----------------HIIETKFEMIKL 106
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---KF 273
+ RQ + H ++HRD+K N ED ++K DFGL+ +F
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 274 QDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 329
+ + GS ++APEV++ + +SDV++ G++ Y L+ G+ P+ + ++
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 223
Query: 330 NK--PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
K + + K + + L K R Q L+
Sbjct: 224 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 197 bits (501), Expect = 1e-58
Identities = 80/330 (24%), Positives = 120/330 (36%), Gaps = 63/330 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 62
Query: 153 LAGHENVVKFYNAFEDDN-----YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
HEN++ + VY+ L + K
Sbjct: 63 FR-HENIIGINDIIRAPTIEQMKDVYLVTHLMGA-------------------DLYKLLK 102
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+LR H ++HRD+KP N L LK DFGL+
Sbjct: 103 TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLARVA 159
Query: 268 KPGK----KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTED 321
P + V + +Y APE++ D+WS+G I +L R F K
Sbjct: 160 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 219
Query: 322 GIFKEVLR-----------------------NKPDFRRKPW----PSISNSAKDFVKKLL 354
+L + P + PW P+ + A D + K+L
Sbjct: 220 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 279
Query: 355 VKDPRARLTAAQALSHPWVREGGDASEIPI 384
+P R+ QAL+HP++ + D S+ PI
Sbjct: 280 TFNPHKRIEVEQALAHPYLEQYYDPSDEPI 309
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (499), Expect = 2e-58
Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 57/320 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQ 65
Query: 149 ILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWF 202
I++ L H N+V+ F +D+ Y+ + ++
Sbjct: 66 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--------------AR 110
Query: 203 LAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 262
R + + Q+ R A H G+ HRD+KP+N L + + LK DFG
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFG 168
Query: 263 LSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTE 320
+ + G+ + S YY APE++ + DVWS G + LL G+ F +
Sbjct: 169 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
Query: 321 DGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLV 355
E+++ P + PW P A +LL
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 288
Query: 356 KDPRARLTAAQALSHPWVRE 375
P ARLT +A +H + E
Sbjct: 289 YTPTARLTPLEACAHSFFDE 308
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 193 bits (492), Expect = 1e-57
Identities = 73/317 (23%), Positives = 127/317 (40%), Gaps = 66/317 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y + + LG G++ + A + N ++V VK ++ K + +KRE+KIL+ L G
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK------KKIKREIKILENLRGG 89
Query: 157 ENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
N++ + +D + E + T+
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY--------------------QTLTDY 129
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 274
D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+++
Sbjct: 130 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYN 187
Query: 275 DIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKT------------- 319
V S Y+ PE+L D+WS+G + ++ + PF+
Sbjct: 188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 247
Query: 320 -----EDGIFKEVLRNKPDF----------------RRKPWPSISNSAKDFVKKLLVKDP 358
D I K + P F + +S A DF+ KLL D
Sbjct: 248 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 307
Query: 359 RARLTAAQALSHPWVRE 375
++RLTA +A+ HP+
Sbjct: 308 QSRLTAREAMEHPYFYT 324
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 193 bits (490), Expect = 3e-57
Identities = 69/304 (22%), Positives = 116/304 (38%), Gaps = 26/304 (8%)
Query: 86 TDFGYDK--DFDR-RYTIGKLLGHGQFGYTYVATDKANGDR-----VAVKKIEKNKMILP 137
++ YD +F R GK+LG G FG AT VAVK +++
Sbjct: 24 REYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--S 81
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
E + E+K++ L HEN+V A +Y+ E C G+LL+ + +K +
Sbjct: 82 SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSE 141
Query: 198 TSAWFLAIRK------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251
+ ++ + T +D Q+ + VHRD+ N L
Sbjct: 142 DEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV---T 198
Query: 252 EDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY- 306
+K DFGL+ I + + ++APE L +SDVWS G++ +
Sbjct: 199 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWE 258
Query: 307 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 366
I G P+ D F ++++N F+ + ++ D R R +
Sbjct: 259 IFSLGVNPYPGIPVDANFYKLIQN--GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPN 316
Query: 367 ALSH 370
S
Sbjct: 317 LTSF 320
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 190 bits (483), Expect = 1e-56
Identities = 71/303 (23%), Positives = 110/303 (36%), Gaps = 50/303 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL--PIAVEDVKREVKILQALAGHENV 159
LG GQF Y A DK VA+KKI+ RE+K+LQ L H N+
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNI 62
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
+ +AF + + + + E + T
Sbjct: 63 IGLLDAFGHKSNISLVFDFMETDLE-----------------VIIKDNSLVLTPSHIKAY 105
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 278
+ L+ H H ++HRD+KP N L E+ LK DFGL+ F P + + V
Sbjct: 106 MLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFGLAKSFGSPNRAYTHQVV 162
Query: 279 SAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 336
+ +Y APE+L R G D+W++G I LL ++ +
Sbjct: 163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 222
Query: 337 KPWP------------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372
+ WP + + D ++ L + +P AR+TA QAL +
Sbjct: 223 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 282
Query: 373 VRE 375
Sbjct: 283 FSN 285
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (481), Expect = 3e-56
Identities = 63/280 (22%), Positives = 111/280 (39%), Gaps = 10/280 (3%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D++ ++G G FG A K +G R+ + D E+++L
Sbjct: 8 DWND-IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 66
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
L H N++ A E Y+Y+A+E G LLD + + T A+ +A S +
Sbjct: 67 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLET-DPAFAIANSTASTLS 125
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
+ + R +HRD+ N L E+ K DFGLS + K
Sbjct: 126 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVK 182
Query: 273 FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRN 330
++A E L SDVWS GV+ + ++ G P+ T +++++ +
Sbjct: 183 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 242
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
+R + + + D +++ + P R + AQ L
Sbjct: 243 ---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (480), Expect = 3e-56
Identities = 73/314 (23%), Positives = 122/314 (38%), Gaps = 52/314 (16%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKIEKNKMILPIAVEDVKREVKILQA 152
D++Y +G G +G + A D NG R VA+K++ REV +L+
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRH 63
Query: 153 LAG--HENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
L H NVV+ ++ + + + + E + +L
Sbjct: 64 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLT----------------TYLDK 107
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
+ + ++ Q+LR H H +VHRD+KP+N L S +K DFGL+
Sbjct: 108 VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLAR 164
Query: 266 FIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324
+V + +Y APEVL + S D+WS+G I + + F ++
Sbjct: 165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 224
Query: 325 KEVLRNKPDFRRKPWP-----------------------SISNSAKDFVKKLLVKDPRAR 361
++L + WP I KD + K L +P R
Sbjct: 225 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 284
Query: 362 LTAAQALSHPWVRE 375
++A ALSHP+ ++
Sbjct: 285 ISAYSALSHPYFQD 298
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (481), Expect = 4e-56
Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 34/293 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMIL-PIAVEDVKREVKILQA 152
+ + K+LG G +G ++ + G A+K ++K ++ E + E ++L+
Sbjct: 25 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+ +V + AF+ + +++ ++ GGEL + + R+T
Sbjct: 85 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL-----------------SQRERFT 127
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP--G 270
E + + V +++ H G+++RD+K EN L + + TDFGLS
Sbjct: 128 EHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFVADET 184
Query: 271 KKFQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
++ D G+ Y+AP++++ D WS+GV+ Y LL G PF E E+
Sbjct: 185 ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI 244
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 375
R +S AKD +++LL+KDP+ RL A + H + ++
Sbjct: 245 SRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 187 bits (475), Expect = 1e-55
Identities = 77/307 (25%), Positives = 120/307 (39%), Gaps = 51/307 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y + +G G +G Y A + G+ A+KKI K RE+ IL+ L H
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKED-EGIPSTTIREISILKELK-H 59
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+VK Y+ + + E + L + A
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLK-----------------KLLDVCEGGLESVTA 102
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQD 275
+ Q+L A CH ++HRD+KP+N L + LK DFGL+ P +K+
Sbjct: 103 KSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR---EGELKIADFGLARAFGIPVRKYTH 159
Query: 276 IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ + +Y AP+VL +K D+WS+G I ++ G F +E + R
Sbjct: 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGT 219
Query: 334 FRRKPWPSI-------------------------SNSAKDFVKKLLVKDPRARLTAAQAL 368
K WP++ S D + K+L DP R+TA QAL
Sbjct: 220 PNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
Query: 369 SHPWVRE 375
H + +E
Sbjct: 280 EHAYFKE 286
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 188 bits (479), Expect = 2e-55
Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 49/321 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
+ Y + +G G +G A D G +VA+KK+ + + + RE+++L+
Sbjct: 15 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS-ELFAKRAYRELRLLKH 73
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+ HENV+ + F D + + + + K +
Sbjct: 74 MR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-------------DLGKLMKHEKLG 119
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
E +V QML+ H G++HRD+KP N ED LK DFGL+ +
Sbjct: 120 EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQ--ADSE 174
Query: 273 FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR- 329
V + +Y APEV+ + D+WS+G I ++ G+ F KE+++
Sbjct: 175 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKV 234
Query: 330 ----------------------NKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLT 363
P+ +K + SI S A + ++K+LV D R+T
Sbjct: 235 TGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT 294
Query: 364 AAQALSHPWVREGGDASEIPI 384
A +AL+HP+ D + P
Sbjct: 295 AGEALAHPYFESLHDTEDEPQ 315
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (475), Expect = 3e-55
Identities = 76/329 (23%), Positives = 117/329 (35%), Gaps = 65/329 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y +G G FG + A + G +VA+KK+ RE+KILQ L H
Sbjct: 11 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLK-H 68
Query: 157 ENVVKFYNAFED--------DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKD 208
ENVV +Y+ + CE L
Sbjct: 69 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA-----------------GLLSNVL 111
Query: 209 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 268
++T + V++ +L H + ++HRDMK N L D LK DFGL+
Sbjct: 112 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFS 168
Query: 269 PGKK-----FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED 321
K + + V + +Y PE+L +R GP D+W G I + TE
Sbjct: 169 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 228
Query: 322 GIFKEVLRNKPDFRRKPWPSISN----------------------------SAKDFVKKL 353
+ + + WP++ N A D + KL
Sbjct: 229 HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKL 288
Query: 354 LVKDPRARLTAAQALSHPWVREGGDASEI 382
LV DP R+ + AL+H + S++
Sbjct: 289 LVLDPAQRIDSDDALNHDFFWSDPMPSDL 317
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 184 bits (468), Expect = 2e-54
Identities = 57/311 (18%), Positives = 106/311 (34%), Gaps = 39/311 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G+ +G G FG Y+ TD A G+ VA+K + E KI + + G
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGG 62
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ + +Y + MEL L +++ K
Sbjct: 63 VGIPTIRWCGAEGDYNVMVMELLGPSLE-----------------DLFNFCSRKFSLKTV 105
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ-- 274
++ QM+ H +HRD+KP+NFL K+ + + DFGL+ + + Q
Sbjct: 106 LLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI 165
Query: 275 ------DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
++ G+A Y + D+ S+G + G P+ ++
Sbjct: 166 PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 225
Query: 328 LRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREGGDAS 380
R P + ++ + + Q + + R+G
Sbjct: 226 ERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS-Y 284
Query: 381 EIPIDISVLNN 391
+ D ++L
Sbjct: 285 DYVFDWNMLKF 295
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (457), Expect = 6e-53
Identities = 69/307 (22%), Positives = 121/307 (39%), Gaps = 49/307 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+ + +G G +G Y A +K G+ VA+KKI + RE+ +L+ L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKEL-NH 60
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
N+VK + +N +Y+ E F+ +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKK----------------FMDASALTGIPLPLI 104
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQD 275
+ Q+L+ A CH H ++HRD+KP+N L + ++K DFGL+ P + +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTH 161
Query: 276 IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333
V + +Y APE+L + D+WS+G I ++ R F +E + R
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 334 FRRKPWPS-------------------------ISNSAKDFVKKLLVKDPRARLTAAQAL 368
WP + + + ++L DP R++A AL
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 369 SHPWVRE 375
+HP+ ++
Sbjct: 282 AHPFFQD 288
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (454), Expect = 9e-53
Identities = 57/278 (20%), Positives = 100/278 (35%), Gaps = 34/278 (12%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ + + +G G+FG + + G++VAVK I+ + + E ++ L
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDAT-----AQAFLAEASVMTQLR- 58
Query: 156 HENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEK 214
H N+V+ E+ +YI E G L+D +L R S
Sbjct: 59 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD---------------YLRSRGRSVLGGD 103
Query: 215 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 274
+ + VHRD+ N L ED+ K +DFGL+ +
Sbjct: 104 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQD-- 158
Query: 275 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKP 332
+ APE L+ K +SDVWS G++ + + GR P+ + V +
Sbjct: 159 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-- 216
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
++ + + +K D R + Q
Sbjct: 217 -YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (454), Expect = 2e-52
Identities = 70/297 (23%), Positives = 109/297 (36%), Gaps = 21/297 (7%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILP 137
T YD ++ R + GK LG G FG AT VAVK ++ +
Sbjct: 10 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--L 67
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTL 197
E + E+K+L L H N+V A + E C G+LL+ + K S
Sbjct: 68 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 127
Query: 198 T-SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 256
+ ++ + + +D Q+ + A +HRD+ N L
Sbjct: 128 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRIT 184
Query: 257 KATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGR 312
K DFGL+ IK + + ++APE + ESDVWS G+ + L
Sbjct: 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 244
Query: 313 RP-FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 368
+ D F ++++ FR D +K DP R T Q +
Sbjct: 245 SSPYPGMPVDSKFYKMIKE--GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 176 bits (447), Expect = 6e-52
Identities = 56/277 (20%), Positives = 100/277 (36%), Gaps = 32/277 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
T K LG GQFG + VA+K I++ M + ++ E K++ L+ HE
Sbjct: 6 LTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLS-HE 59
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAA 217
+V+ Y ++I E G LL+ + R+ +
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL----------------REMRHRFQTQQLL 103
Query: 218 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQD 275
+ + + +HRD+ N L + +K +DFGLS ++ +
Sbjct: 104 EMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVG 160
Query: 276 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPD 333
+ PEVL +SD+W+ GV+ + I G+ P+ T + + +
Sbjct: 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 220
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
+R S + + R T LS+
Sbjct: 221 YR---PHLASEKVYTIMYSCWHEKADERPTFKILLSN 254
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 176 bits (446), Expect = 3e-51
Identities = 65/294 (22%), Positives = 105/294 (35%), Gaps = 37/294 (12%)
Query: 89 GYDKDFDR-RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVK 144
+ K+ D I +++G G+FG K G R VA+K ++ D
Sbjct: 18 EFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT--EKQRRDFL 75
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLA 204
E I+ H NV+ V I E E G L
Sbjct: 76 SEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSL----------------DSFL 118
Query: 205 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 264
+ D ++T ++R + VHRD+ N L + K +DFGLS
Sbjct: 119 RQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLS 175
Query: 265 DFIKPGKKFQD------IVGSAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFW 316
F++ + APE ++ RK SDVWS G++ + ++ G RP+W
Sbjct: 176 RFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 235
Query: 317 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
D T + + + D+R P ++ + KD R Q ++
Sbjct: 236 DMTNQDVINAIEQ---DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (442), Expect = 5e-51
Identities = 55/285 (19%), Positives = 94/285 (32%), Gaps = 32/285 (11%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQ 151
++ + + LG G FG A + VAVK ++ + + P A++D REV +
Sbjct: 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
+L H N+++ Y + EL G LLDR+ + +
Sbjct: 67 SL-DHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRL----------------RKHQGHF 108
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 271
+ Q+ +HRD+ N L +K DFGL +
Sbjct: 109 LLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRALPQND 165
Query: 272 KFQ----DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK 325
+ APE LK ++ SD W GV + + G+ P+ I
Sbjct: 166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 225
Query: 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
++ + R + + + P R T
Sbjct: 226 KIDKEGERLPR--PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 268
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 177 bits (448), Expect = 5e-51
Identities = 81/321 (25%), Positives = 126/321 (39%), Gaps = 49/321 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
+ RY +G G +G A D G RVAVKK+ + I + RE+++L+
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKH 73
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
+ HENV+ + F + ++ + T L A I K + T
Sbjct: 74 MK-HENVIGLLDVFTPARSLEEFNDVY-------------LVTHLMGADLNNIVKCQKLT 119
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
+ ++ Q+LR H ++HRD+KP N ED LK DFGL+ +
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDE 174
Query: 273 FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 331 KPDFR---------------------------RKPWPSISNSAKDFVKKLLVKDPRARLT 363
+ + A D ++K+LV D R+T
Sbjct: 235 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 294
Query: 364 AAQALSHPWVREGGDASEIPI 384
AAQAL+H + + D + P+
Sbjct: 295 AAQALAHAYFAQYHDPDDEPV 315
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 176 bits (447), Expect = 7e-51
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 33/285 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
++ K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NF 100
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+VK +F+D++ +Y+ ME GGE+ +R+ R++E A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSH-----------------LRRIGRFSEPHA 143
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 276
Q++ H L++RD+KPEN L + ++ TDFG + +K + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWTL 198
Query: 277 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 335
G+ +APE++ K D W++GV+ Y + G PF+ I+++++ K F
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF- 257
Query: 336 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 375
S+ KD ++ LL D R +H W
Sbjct: 258 ---PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (442), Expect = 8e-51
Identities = 65/308 (21%), Positives = 122/308 (39%), Gaps = 51/308 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y + +G G +G + A ++ + VA+K++ + RE+ +L+ L H
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELK-H 60
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+N+V+ ++ D + + E C+ + +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFD-----------------SCNGDLDPEIV 103
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQD 275
+ Q+L+ CH ++HRD+KP+N L + LK +FGL+ F P + +
Sbjct: 104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR---NGELKLANFGLARAFGIPVRCYSA 160
Query: 276 IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKP 332
V + +Y P+VL + D+WS G I L RP + D K + R
Sbjct: 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 220
Query: 333 DFRRKPWPS-------------------------ISNSAKDFVKKLLVKDPRARLTAAQA 367
+ WPS ++ + +D ++ LL +P R++A +A
Sbjct: 221 TPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
Query: 368 LSHPWVRE 375
L HP+ +
Sbjct: 281 LQHPYFSD 288
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 176 bits (447), Expect = 8e-51
Identities = 75/334 (22%), Positives = 128/334 (38%), Gaps = 70/334 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+RY K +G G G A D VA+KK+ + + RE+ +++ +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCV-N 74
Query: 156 HENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDS 209
H+N++ N F E+ VY+ MEL +
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--------------------M 114
Query: 210 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 115 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGT 171
Query: 270 GKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328
V + YY APE +L D+WS+G I ++ + F + + +V+
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 231
Query: 329 R----------------------NKPDFRRKPWPSI----------------SNSAKDFV 350
N+P + +P + ++ A+D +
Sbjct: 232 EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL 291
Query: 351 KKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
K+LV DP R++ AL HP++ D +E+
Sbjct: 292 SKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA 325
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (442), Expect = 1e-50
Identities = 61/293 (20%), Positives = 108/293 (36%), Gaps = 18/293 (6%)
Query: 90 YDKDFD---RRYTIGKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKMILPIA 139
D ++ R +GK LG G FG +A +VAVK ++ +
Sbjct: 4 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--EKD 61
Query: 140 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
+ D+ E+++++ + H+N++ A D +Y+ +E G L + L L
Sbjct: 62 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE-YLQARRPPGLEY 120
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + + KD Q+ R +HRD+ N L
Sbjct: 121 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG 180
Query: 260 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWD 317
I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 181 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 240
Query: 318 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
+ +FK + R + +N ++ P R T Q +
Sbjct: 241 VPVEELFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (439), Expect = 1e-50
Identities = 53/278 (19%), Positives = 104/278 (37%), Gaps = 32/278 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
T + +G GQFG ++ N D+VA+K I + M + ED E +++ L H
Sbjct: 6 ELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SH 59
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+V+ Y + + + E E G L D + + +
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSD----------------YLRTQRGLFAAETL 103
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQ 274
+ + A ++HRD+ N L E+ +K +DFG++ F+ +
Sbjct: 104 LGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSST 160
Query: 275 DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFW-DKTEDGIFKEVLRNKP 332
+ +PEV + +SDVWS GV+ + + + + +++ + +++
Sbjct: 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-- 218
Query: 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
FR S + + P R ++ L
Sbjct: 219 -FRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (440), Expect = 2e-50
Identities = 66/293 (22%), Positives = 105/293 (35%), Gaps = 36/293 (12%)
Query: 88 FGYDK-DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR 145
D + R + LG G FG ++ T RVA+K ++ M + E +
Sbjct: 7 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM----SPEAFLQ 61
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
E ++++ L HE +V+ Y ++ YI E G LLD +
Sbjct: 62 EAQVMKKL-RHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKG--------------- 104
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
+ Q+ A VHRD++ N L E+ K DFGL+
Sbjct: 105 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLAR 161
Query: 266 FIKPGK--KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTED 321
I+ + Q + APE +SDVWS G++ L GR P+
Sbjct: 162 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 221
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPW 372
+ +V R +R P S D + + K+P R T + +
Sbjct: 222 EVLDQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 271
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 172 bits (436), Expect = 6e-50
Identities = 61/285 (21%), Positives = 105/285 (36%), Gaps = 30/285 (10%)
Query: 90 YDK-DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
YDK + +R T+ LG GQ+G Y K VAVK ++++ M VE+ +E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEA 64
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRK 207
+++ + H N+V+ + YI E G LLD +L
Sbjct: 65 AVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLD---------------YLRECN 108
Query: 208 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 267
+ + Q+ +HRD+ N L E+ +K DFGLS +
Sbjct: 109 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM 165
Query: 268 KPGK--KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324
+ APE L +SDVW+ GV+ + + + +
Sbjct: 166 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 225
Query: 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
E+L + D+R + + ++ +P R + A+
Sbjct: 226 YELL--EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 170 bits (432), Expect = 2e-49
Identities = 58/288 (20%), Positives = 108/288 (37%), Gaps = 35/288 (12%)
Query: 89 GYDKDFD---RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR 145
++ +++ + + LG GQFG ++ +VAVK +++ M + +
Sbjct: 3 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLA 57
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAI 205
E +++ L H+ +V+ Y + +YI E E G L+D FL
Sbjct: 58 EANLMKQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVD---------------FLKT 100
Query: 206 RKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265
+ T + Q+ A +HRD++ N L K DFGL+
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC---KIADFGLAR 157
Query: 266 FIKPGKKF--QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTED 321
I+ + + + APE + +SDVWS G++ ++ GR P+ T
Sbjct: 158 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
Query: 322 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
+ + + R +R + ++ + P R T S
Sbjct: 218 EVIQNLERG---YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 168 bits (427), Expect = 8e-49
Identities = 58/282 (20%), Positives = 103/282 (36%), Gaps = 37/282 (13%)
Query: 102 KLLGHGQFGYTYVAT--DKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
K LG G FG K VAVK + KN+ P +++ E ++Q L + +
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQL-DNPYI 70
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVV 219
V+ E +++ + ME+ E G L + +++ +K+ +
Sbjct: 71 VRMIGICEAESW-MLVMEMAELGPLNKYL-----------------QQNRHVKDKNIIEL 112
Query: 220 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD---- 275
V Q+ VHRD+ N L + K +DFGLS ++ + +
Sbjct: 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVT---QHYAKISDFGLSKALRADENYYKAQTH 169
Query: 276 IVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 333
+ APE + K +SDVWS GV+ + G++P+ + + + +
Sbjct: 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE-- 227
Query: 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ---ALSHPW 372
R D + D R A L + +
Sbjct: 228 -RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (424), Expect = 2e-48
Identities = 55/289 (19%), Positives = 97/289 (33%), Gaps = 38/289 (13%)
Query: 97 RYTIGKL-LGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQAL 153
I + LG G FG + + VA+K +++ E++ RE +I+ L
Sbjct: 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQL 66
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
+ +V+ + + + ME+ GG L + + K
Sbjct: 67 -DNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFL----------------VGKREEIPV 108
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+ A ++ Q+ VHRD+ N L K +DFGLS + +
Sbjct: 109 SNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALGADDSY 165
Query: 274 QD----IVGSAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 327
+ APE + RK SDVWS GV + L G++P+ + +
Sbjct: 166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 225
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWV 373
+ K R + P + + R Q + +
Sbjct: 226 EQGK---RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 166 bits (421), Expect = 5e-48
Identities = 61/281 (21%), Positives = 103/281 (36%), Gaps = 33/281 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQAL 153
R +G+ +G GQFG + + + VA+K + E +E ++
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS--DSVREKFLQEALTMRQF 65
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTE 213
H ++VK +N V+I MELC GEL +
Sbjct: 66 -DHPHIVKLIGVIT-ENPVWIIMELCTLGELRS----------------FLQVRKYSLDL 107
Query: 214 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 273
+ Q+ A VHRD+ N L S + +K DFGLS +++ +
Sbjct: 108 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYY 164
Query: 274 Q--DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 329
+ ++APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 165 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 224
Query: 330 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
+ R P+ + + K DP R + +
Sbjct: 225 GE---RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 163 bits (414), Expect = 9e-47
Identities = 49/288 (17%), Positives = 102/288 (35%), Gaps = 37/288 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
Y +G+ +G G FG + T+ N +VA+K + ++ E + + LAG
Sbjct: 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGC 60
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDA 216
+ Y ++ + + ++L S L +++ K
Sbjct: 61 TGIPNVYYFGQEGLHNVLVIDLLG-----------------PSLEDLLDLCGRKFSVKTV 103
Query: 217 AVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLSDFIKPG---- 270
A+ +QML H LV+RD+KP+NFL ++K + + DFG+ F +
Sbjct: 104 AMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 163
Query: 271 ----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG--- 322
++ +++ G+A Y++ + D+ ++G + L G P+
Sbjct: 164 HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ 223
Query: 323 -IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
+ + + R+ ++ A
Sbjct: 224 KYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 163 bits (413), Expect = 1e-46
Identities = 51/295 (17%), Positives = 103/295 (34%), Gaps = 27/295 (9%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKRE 146
++ R + +G G FG + A VAVK +++ D +RE
Sbjct: 9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQRE 66
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI-------LAKMISTTLTS 199
++ + N+VK + + E G+L + + + + + L++
Sbjct: 67 AALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST 125
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
++ + + + RQ+ A VHRD+ N L E+ +K
Sbjct: 126 RARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIA 182
Query: 260 DFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR-P 314
DFGLS I ++ + ++ PE + + ESDVW+ GV+ + + P
Sbjct: 183 DFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 242
Query: 315 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
++ + + V + + ++ K P R +
Sbjct: 243 YYGMAHEEVIYYVRDGN---ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (397), Expect = 4e-44
Identities = 54/280 (19%), Positives = 99/280 (35%), Gaps = 31/280 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK--NKMILPIAVEDVKREVKILQALAG 155
+ K+LG G FG Y G++V + K + P A +++ E ++ ++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-D 69
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKD 215
+ +V + I +L G LLD + +
Sbjct: 70 NPHVCRLLGICLTSTVQLI-TQLMPFGCLLDYV----------------REHKDNIGSQY 112
Query: 216 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--- 272
Q+ + LVHRD+ N L K +K TDFGL+ + +K
Sbjct: 113 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH 169
Query: 273 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 330
+ ++A E + + +SDVWS GV + L+ G +P+ I + +
Sbjct: 170 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 229
Query: 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
+ R P + + K + D +R + +
Sbjct: 230 E---RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (386), Expect = 1e-42
Identities = 54/295 (18%), Positives = 108/295 (36%), Gaps = 32/295 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+ T+ + LG G FG Y K RVA+K + + + E +++
Sbjct: 21 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS--MRERIEFLNEASVMK 78
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRY 211
+VV+ + MEL G+L + + + +
Sbjct: 79 EF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA-------MANNPVLAPP 130
Query: 212 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG- 270
+ + ++ A + + VHRD+ N + ED ++K DFG++ I
Sbjct: 131 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETD 187
Query: 271 --KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 326
+K + +++PE LK SDVWS GV+ + I +P+ + + + +
Sbjct: 188 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 247
Query: 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS------HPWVRE 375
V+ + + + ++ +P+ R + + +S P RE
Sbjct: 248 VMEGG---LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (383), Expect = 2e-42
Identities = 51/282 (18%), Positives = 96/282 (34%), Gaps = 33/282 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQA 152
T K++G G+FG Y K + + VA+K ++ D E I+
Sbjct: 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT--EKQRVDFLGEAGIMGQ 65
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYT 212
H N+++ + I E E G + KD ++
Sbjct: 66 F-SHHNIIRLEGVISKYKPMMIITEYMENG----------------ALDKFLREKDGEFS 108
Query: 213 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 272
++R + VHRD+ N L + K +DFGLS ++ +
Sbjct: 109 VLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPE 165
Query: 273 ----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327
+ APE + RK SDVWS G++ + ++ + + + +
Sbjct: 166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA 225
Query: 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369
+ + FR ++ + + ++ R A +S
Sbjct: 226 IND--GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (382), Expect = 4e-42
Identities = 69/296 (23%), Positives = 109/296 (36%), Gaps = 23/296 (7%)
Query: 90 YDKD---FDR-RYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKMILPIAV 140
YD F R R +GK LG G FG A A VAVK +++
Sbjct: 3 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEH 60
Query: 141 EDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKMISTTLTS 199
+ E+KIL + H NVV A + + + +E C+ G L + +K
Sbjct: 61 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 120
Query: 200 AWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259
+ KD T + Q+ + +HRD+ N L E + +K
Sbjct: 121 VAPEDLYKD-FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKIC 176
Query: 260 DFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRR-P 314
DFGL+ I + D ++APE + R +SDVWS GV+ + + P
Sbjct: 177 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 236
Query: 315 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
+ D F L+ R + + + +P R T ++ + H
Sbjct: 237 YPGVKIDEEFCRRLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 290
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (380), Expect = 1e-41
Identities = 53/287 (18%), Positives = 98/287 (34%), Gaps = 36/287 (12%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQ 151
+++G G FG Y T N + AVK + + V E I++
Sbjct: 26 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--IGEVSQFLTEGIIMK 83
Query: 152 ALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
+ H NV+ + + + + G+L + +
Sbjct: 84 DFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN----------------FIRNETHN 126
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
T KD Q+ + VHRD+ N + E ++K DFGL+ +
Sbjct: 127 PTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDK 183
Query: 271 KKFQD-----IVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFW-DKTEDGI 323
+ ++A E L+ +K +SDVWS GV+ + L+ P + D I
Sbjct: 184 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 243
Query: 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370
+L+ + R + + + K R + ++ +S
Sbjct: 244 TVYLLQGR---RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 149 bits (377), Expect = 6e-41
Identities = 72/349 (20%), Positives = 126/349 (36%), Gaps = 77/349 (22%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL- 153
D RY + + LG G F ++A D N VA+K + +K+ E + E+K+LQ +
Sbjct: 12 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDEIKLLQRVN 67
Query: 154 ---------AGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWF 202
G +++K + F N V++ M GE L ++ K
Sbjct: 68 DADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK----------- 116
Query: 203 LAIRKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSL-KATD 260
+ + +Q+L H G++H D+KPEN L + +L +
Sbjct: 117 ---YEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKI 173
Query: 261 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKT 319
L + + + + + + Y +PEVL G +D+WS + + L+ G F
Sbjct: 174 ADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 233
Query: 320 EDGIFKEV---------------------------------LRNKPDFRRKPWPSI---- 342
K+ LRN + P +
Sbjct: 234 GHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEK 293
Query: 343 -------SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 384
+ DF+ +L DPR R A ++HPW+++ EI +
Sbjct: 294 YKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 342
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (368), Expect = 3e-40
Identities = 59/308 (19%), Positives = 110/308 (35%), Gaps = 56/308 (18%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ-ALA 154
R + + +G G+FG + + G+ VAVK + RE +I Q +
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREE------RSWFREAEIYQTVML 54
Query: 155 GHENVVKFYNAFEDDN----YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSR 210
HEN++ F A DN +++ + E G L D + ++ L+
Sbjct: 55 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST----- 109
Query: 211 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 270
A+ + + + + HRD+K +N L K++ + D GL+
Sbjct: 110 -----ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSA 161
Query: 271 KKFQD-----IVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRRPF--- 315
D VG+ Y+APEVL +S +D++++G++ + +
Sbjct: 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221
Query: 316 ------------WDKTEDGIFKEVLRNKPDFR---RKPWPSISNSAKDFVKKLLVKDPRA 360
D + + + K V K R +++ + A
Sbjct: 222 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 281
Query: 361 RLTAAQAL 368
RLTA +
Sbjct: 282 RLTALRIK 289
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 87.6 bits (216), Expect = 5e-21
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
+S L +E++A+ ++ F D D NGSIS E+ + E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEIDVDG 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 528
+ ++FSEF+A + + + E AF+ FD + DG I+ EL+ G
Sbjct: 60 NHQIEFSEFLALMSRQLKSNDSEQELLE-----AFKVFDKNGDGLISAAELKHVLTSIGE 114
Query: 529 -----SIDPLLEEADIDKDGRISLSEFRRLLR 555
+D +L E D G I++ +F LL
Sbjct: 115 KLTDAEVDDMLREVS-DGSGEINIQQFAALLS 145
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.6 bits (107), Expect = 2e-06
Identities = 23/129 (17%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
Query: 352 KLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAS 411
L KD +++++ L+ G SE ++ + +F
Sbjct: 17 ALFDKDNNGSISSSE-LATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQ 75
Query: 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
++ +L + F D + +G IS E++ L + KL ++ V ++L+ + + G
Sbjct: 76 LKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL-TSIGEKLTDAEVDDMLREVS-DGSG 133
Query: 472 LVDFSEFVA 480
++ +F A
Sbjct: 134 EINIQQFAA 142
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 85.4 bits (210), Expect = 4e-20
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 470
+ L +E +A+ + FD D D G IS +E+ + + + I++ +D +
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGS 70
Query: 471 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS- 529
G +DF EF+ + + + + L F FD + DGFI EEL G
Sbjct: 71 GTIDFEEFLVMMVRQMKEDAKGKSEEELA--NCFRIFDKNADGFIDIEELGEILRATGEH 128
Query: 530 -----IDPLLEEADIDKDGRISLSEFRRLL 554
I+ L++++D + DGRI EF +++
Sbjct: 129 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 83.4 bits (205), Expect = 1e-19
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + E+ + +++ +D + +G
Sbjct: 3 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGT 61
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL------ 526
+DF EF++ + ++ + E AF+ FD D +G I+ ELR
Sbjct: 62 IDFPEFLSLMARKMKEQDSEEELIE-----AFKVFDRDGNGLISAAELRHVMTNLGEKLT 116
Query: 527 KGSIDPLLEEADIDKDGRISLSEFRRLLRT 556
+D ++ EADID DG I+ EF R++ +
Sbjct: 117 DDEVDEMIREADIDGDGHINYEEFVRMMVS 146
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.0 bits (204), Expect = 5e-19
Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 28/177 (15%)
Query: 399 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
S+LK + L ++E+ F +G + ++ + P+
Sbjct: 3 SKLKPEVVEELTRKTYFTEKEVQQWYKGFI--KDCPSGQLDAAGFQKIYKQFFPFGDPTK 60
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+ D N DG ++FSEF+ A L + + AF+ +D+D DG+IT
Sbjct: 61 FATFVFNVFDENKDGRIEFSEFIQA------LSVTSRGTLDEKLRWAFKLYDLDNDGYIT 114
Query: 517 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
E+ + +D + D + DG+++L EF+ +
Sbjct: 115 RNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 171
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 81.8 bits (201), Expect = 1e-18
Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 28/177 (15%)
Query: 399 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
S+L+ ++ L + + E+ + F +G +S+EE ++ P+
Sbjct: 2 SKLRPEVMQDLLESTDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASK 59
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+ + D N DG +DF EF+ A + + KW AF +D+D +G+I+
Sbjct: 60 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKW------AFSMYDLDGNGYIS 113
Query: 517 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
E+ + + + + + D ++DG++SL EF R +
Sbjct: 114 KAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 170
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 81.2 bits (199), Expect = 1e-18
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 407 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 465
+A L +E+ + + FD + ++GSIS +E+ + + + L + E++ +
Sbjct: 2 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVM-RMLGQNPTPEELQEMIDEV 60
Query: 466 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525
D + G VDF EF+ + + + + L F FD + DG+I EEL++
Sbjct: 61 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS--DLFRMFDKNADGYIDLEELKIMLQ 118
Query: 526 LKGS------IDPLLEEADIDKDGRISLSEFRRLLR 555
G I+ L+++ D + DGRI EF ++
Sbjct: 119 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 81.2 bits (199), Expect = 2e-18
Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 20/163 (12%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP---------WKLKESRVLEILQ 463
+ + + F+ +DV+ NG ISL+EM + + K + V
Sbjct: 6 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 65
Query: 464 AIDCNTDGLVDFSEFV-----AATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 518
D+ ++ AT + + +++ + A F+ D D++G IT +
Sbjct: 66 GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 125
Query: 519 ELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555
E + +T G + DID+ G++ + E R
Sbjct: 126 EWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 168
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 39.2 bits (90), Expect = 5e-04
Identities = 25/152 (16%), Positives = 44/152 (28%), Gaps = 2/152 (1%)
Query: 345 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK-YSRLKQ 403
S + V K + + V + +++ + +L
Sbjct: 30 SLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLAT 89
Query: 404 FALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQ 463
L A FD +D D+NG+I+L+E + K E +
Sbjct: 90 DELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYT-KAAGIIQSSEDCEETFR 148
Query: 464 AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 495
D + G +D E L + EK
Sbjct: 149 VCDIDESGQLDVDEMTRQHLGFWYTMDPACEK 180
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.7 bits (190), Expect = 1e-17
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 474
+E+ ++R+ FD D D G+I ++E+ + + L ++ K+ + +++ ID G ++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKEL-KVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 475 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 528
F +F+ ++ E AF+ FD D G I+ + L+ G
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILK-----AFKLFDDDETGKISFKNLKRVAKELGENLTDE 115
Query: 529 SIDPLLEEADIDKDGRISLSEFRRLL 554
+ +++EAD D DG +S EF R++
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEFLRIM 141
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 75.6 bits (185), Expect = 2e-16
Identities = 36/178 (20%), Positives = 69/178 (38%), Gaps = 28/178 (15%)
Query: 399 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 456
S+L + L L + D E+ F + +G ++ E+ + + P+ E
Sbjct: 6 SKLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPED 63
Query: 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+ D + +G + F EF+ + + W AFE +D++ DG+IT
Sbjct: 64 FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSW------AFELYDLNHDGYIT 117
Query: 517 PEELR----MHTGLKGS--------------IDPLLEEADIDKDGRISLSEFRRLLRT 556
+E+ + GS + + + D ++DG I+L EFR +
Sbjct: 118 FDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 74.7 bits (182), Expect = 3e-16
Identities = 24/155 (15%), Positives = 46/155 (29%), Gaps = 15/155 (9%)
Query: 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK----------DLPWKLKESRVLEILQA 464
D + ++ F+ ID DK+G+I+ + + + +
Sbjct: 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61
Query: 465 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 521
+D + F+ ++ F D + D I+ +E
Sbjct: 62 TAVAGGKGIDETTFI-NSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 522 -MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
M K + D + DG +SL EF
Sbjct: 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 38.1 bits (87), Expect = 9e-04
Identities = 12/75 (16%), Positives = 21/75 (28%), Gaps = 17/75 (22%)
Query: 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE---------------- 536
S+ W + + F + D D+DG IT + + E
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 537 -ADIDKDGRISLSEF 550
+ I + F
Sbjct: 61 LTAVAGGKGIDETTF 75
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 36.6 bits (83), Expect = 0.004
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
L F A+D +++ +IS +E L ++ AID N DGL+
Sbjct: 89 KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM---LGLDKTMAPASFDAIDTNNDGLL 145
Query: 474 DFSEFVAATLHVHQLEEHDSEKW 496
EFV A + + K
Sbjct: 146 SLEEFVIAGSDFFMNDGDSTNKV 168
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 71.1 bits (174), Expect = 6e-16
Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 407 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 466
+ +A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++ A D
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAAD 69
Query: 467 CNTDGLVDFSEFVAATLH 484
+ G +D+ EF+AAT+H
Sbjct: 70 IDKSGTIDYGEFIAATVH 87
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 50.7 bits (121), Expect = 8e-09
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 468 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 527
++ G +D + A E SE+ + F+ D D G IT +EL+
Sbjct: 1 HSSGHIDDDDKHMA--------ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRV 52
Query: 528 GS------IDPLLEEADIDKDGRISLSEF 550
GS I L++ ADIDK G I EF
Sbjct: 53 GSELMESEIKDLMDAADIDKSGTIDYGEF 81
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 73.3 bits (179), Expect = 8e-16
Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 26/161 (16%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
EL L F + +G ++ E +Q A+ P + + A D G
Sbjct: 10 FTKRELQVLYRGFK--NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 67
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT-------- 524
V F +FV A + + H+ +W F +DI++DG+I EE+
Sbjct: 68 VKFEDFVTALSILLRGTVHEKLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMG 121
Query: 525 ----------GLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
+ +D ++ D +KDG ++L EF +
Sbjct: 122 KYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ 162
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 73.5 bits (179), Expect = 8e-16
Identities = 26/169 (15%), Positives = 49/169 (28%), Gaps = 21/169 (12%)
Query: 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLP--------------WKLKESRVLEILQAI 465
L+ +FD D D NG++ + + + +
Sbjct: 8 RLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEA 67
Query: 466 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS--QAAFEKFDIDRDGFITPEELRMH 523
+DG + +F+ T ++ + S L + D + DG I +E
Sbjct: 68 GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAW 127
Query: 524 TGLKGS----IDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSP 568
G + D + +G +SL E +R R
Sbjct: 128 LTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVR-DFHFGRLDVELL 175
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 72.1 bits (176), Expect = 3e-15
Identities = 37/220 (16%), Positives = 67/220 (30%), Gaps = 50/220 (22%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM---------------ILPIAVED 142
IGKL+G G+ + + VK + +A+
Sbjct: 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60
Query: 143 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWF 202
+ E + LQ L V K Y + + MEL +
Sbjct: 61 ARNEFRALQKLQ-GLAVPKVYAWEGN----AVLMELIDAK-------------------- 95
Query: 203 LAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 262
+ R ++ V+ +L A+ + G+VH D+ N L + + DF
Sbjct: 96 ----ELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV----SEEGIWIIDFP 147
Query: 263 LSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIG 302
S + + +++I+ R E D+ S
Sbjct: 148 QSVEVGE-EGWREILERDVRNIITYFSRTYRTEKDINSAI 186
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.7 bits (172), Expect = 3e-15
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 11/142 (7%)
Query: 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI--DCNTDGLVDFSE 477
+ ++ F+ D +G I + + + L + VL++L D VDF
Sbjct: 1 EFKEAFELFDRVGDGKILYSQCGDVM-RALGQNPTNAEVLKVLGNPKSDELKSRRVDFET 59
Query: 478 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGSIDPL- 533
F+ V + + + +L F FD + +G + ELR G K + + +
Sbjct: 60 FLPMLQAVAKNRGQGTYEDYL---EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVE 116
Query: 534 -LEEADIDKDGRISLSEFRRLL 554
+ D +G I+ F + +
Sbjct: 117 TVLAGHEDSNGCINYEAFLKHI 138
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (89), Expect = 4e-04
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 422 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 481
+ F D + NG + E+R L K+ E V +L +++G +++ F+
Sbjct: 80 LEGFRVFDKEGNGKVMGAELRHV-LTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKH 137
Query: 482 TL 483
L
Sbjct: 138 IL 139
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 68.8 bits (168), Expect = 6e-15
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 18/108 (16%)
Query: 460 EILQAID-CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 518
+I +A+D +G + +F A + F+ D D GFI E
Sbjct: 10 DIKKALDAVKAEGSFNHKKFFALVGLKAMSANDVKK--------VFKAIDADASGFIEEE 61
Query: 519 ELRMH------TGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 557
EL+ G + L+ AD D DG+I + EF L+ A
Sbjct: 62 ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 109
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 51.4 bits (123), Expect = 8e-09
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 467
L D++ F AID D +G I EE++ L L ++ L+A D
Sbjct: 32 LVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADK 91
Query: 468 NTDGLVDFSEFVA 480
+ DG + EF
Sbjct: 92 DGDGKIGIDEFET 104
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 71.2 bits (173), Expect = 6e-15
Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 20/163 (12%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD----LPWKLKESRVLEILQAID-- 466
+ + + FD +D++ NG I+L+E+ + D L ++++ ++
Sbjct: 8 DNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFR 67
Query: 467 ---CNTDGLVDFSEFVAA-----TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 518
+ F +F+ T + + ++ A F+ FD D G IT +
Sbjct: 68 GCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLD 127
Query: 519 ELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 555
E + + + G + D+D G + + E R
Sbjct: 128 EWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 170
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 69.7 bits (169), Expect = 2e-14
Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 11/150 (7%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++ A D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAADIDK 59
Query: 470 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 528
G +D+ EF+AAT+H+++LE + +AF FD D G+IT +E++ G
Sbjct: 60 SGTIDYGEFIAATVHLNKLEREE------NLVSAFSYFDKDGSGYITLDEIQQACKDFGL 113
Query: 529 ---SIDPLLEEADIDKDGRISLSEFRRLLR 555
ID +++E D D DG+I EF ++R
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMR 143
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 68.5 bits (166), Expect = 5e-14
Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 22/165 (13%)
Query: 413 LDDEELADLRDQFDAI-DVDKNGSISLEEMRQALAKDLPW--------------KLKESR 457
L+D + ++ FD D++ +GSI + + + E
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 458 VLEILQAIDCNTDGLVDFSEFVAA---TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 514
++ D N D +V + E++A T+ + R F+ D+ DG
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 515 ITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 555
+ EE + + + + L+ ++ L
Sbjct: 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYY 166
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 68.0 bits (165), Expect = 6e-14
Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 411 STLDDEELADLRDQFDAID--VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+ E+ L + F I V +G I+ EE + AL K + + D
Sbjct: 9 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF--ADRVFDLFDTK 66
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR------- 521
+G++ F EF H + + +F+ +D+ + GFI +E++
Sbjct: 67 HNGILGFEEF-----ARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATL 121
Query: 522 -------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
T ++ ID EEAD DG+I E+R L+
Sbjct: 122 AESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 162
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 67.6 bits (164), Expect = 1e-13
Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 30/181 (16%)
Query: 397 KYSRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 454
K L + L L +EEL+ F +G I+ +E + +K P
Sbjct: 4 KSGALSKEILEELQLNTKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADP 61
Query: 455 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 514
++ + ++ D N+DG +DF E+V A + + +W AF +D+D +G
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEW------AFSLYDVDGNGT 115
Query: 515 ITPEEL--------------------RMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 554
I+ E+ + + + D +++ EF
Sbjct: 116 ISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGT 175
Query: 555 R 555
Sbjct: 176 L 176
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.0 bits (160), Expect = 3e-13
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 31/167 (18%)
Query: 413 LDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
+ + A L++ + + +G++ + E ++ K + V + +A D N D
Sbjct: 15 VGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFF-KVPDNEEATQYVEAMFRAFDTNGDN 73
Query: 472 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHTGLK 527
+DF E+VAA V + KW F+ +D DR+G I +E + LK
Sbjct: 74 TIDFLEYVAALNLVLRGTLEHKLKW------TFKIYDKDRNGCIDRQELLDIVESIYKLK 127
Query: 528 GS-------------------IDPLLEEADIDKDGRISLSEFRRLLR 555
+ +D + D + DG++SL+EF R
Sbjct: 128 KACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 174
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 63.8 bits (155), Expect = 3e-13
Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 19/114 (16%)
Query: 453 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 512
LK + + + A G D+ F + + + FE D D+
Sbjct: 6 LKADDINKAISA--FKDPGTFDYKRFFHLVGLKGKTDAQ--------VKEVFEILDKDQS 55
Query: 513 GFITPEELR------MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 557
GFI EEL+ G + LL D D DG+I EF +++ A
Sbjct: 56 GFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 51.1 bits (122), Expect = 1e-08
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 406 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQ 463
+ + +++ F+ +D D++G I EE++ L L ++ +L
Sbjct: 30 FHLVGLKGKTDA--QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLA 87
Query: 464 AIDCNTDGLVDFSEFVA 480
A D + DG + EF
Sbjct: 88 AGDSDHDGKIGADEFAK 104
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.4 bits (156), Expect = 1e-12
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 24/162 (14%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLE-ILQAIDCNT 469
L +E+ +F + + S+ Q + + +LK + E I + +
Sbjct: 11 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSP 70
Query: 470 -DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR------- 521
+ F +F+ D + + AF FD D DG + E+L
Sbjct: 71 AKDSLSFEDFLDLLSVFSDTATPDIKSHY-----AFRIFDFDDDGTLNREDLSRLVNCLT 125
Query: 522 --------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
+ +K ID +LEE+DID+DG I+LSEF+ ++
Sbjct: 126 GEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 167
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 62.3 bits (151), Expect = 1e-12
Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 19/112 (16%)
Query: 453 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 512
LK++ V L A C+ EF A + K + AF D D+
Sbjct: 5 LKDADVAAALAA--CSAADSFKHKEFFAKVGL--------ASKSLDDVKKAFYVIDQDKS 54
Query: 513 GFITPEELRMHTGLKGSIDP---------LLEEADIDKDGRISLSEFRRLLR 555
GFI +EL++ L + D D DG I + EF +++
Sbjct: 55 GFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 51.1 bits (122), Expect = 1e-08
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDC 467
L + L D++ F ID DK+G I +E++ L P L ++ L D
Sbjct: 31 KVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDK 90
Query: 468 NTDGLVDFSEFVA 480
+ DG++ EF A
Sbjct: 91 DGDGMIGVDEFAA 103
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 60.4 bits (146), Expect = 2e-12
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
+S L +E++A+ ++ F D D NGSIS E+ + L E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATV-MRSLGLSPSEAEVNDLMNEIDVDG 59
Query: 470 DGLVDFSEFVA 480
+ ++FSEF+A
Sbjct: 60 NHQIEFSEFLA 70
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.2 bits (104), Expect = 1e-06
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 554
+ AF FD D +G I+ EL G ++ L+ E D+D + +I SEF L+
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 61.1 bits (148), Expect = 3e-12
Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 18/107 (16%)
Query: 460 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 518
+I A+ +C + +F + S+ + + F D D+ G++ +
Sbjct: 10 DIAAALQECQDPDTFEPQKFFQTS--------GLSKMSASQVKDIFRFIDNDQSGYLDGD 61
Query: 519 ELR------MHTGLKGSIDP---LLEEADIDKDGRISLSEFRRLLRT 556
EL+ + + L++ AD D DG+I EF+ ++ +
Sbjct: 62 ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.1 bits (135), Expect = 2e-10
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 467
S L + ++D F ID D++G + +E++ L K +L ES ++ A D
Sbjct: 32 TSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADN 91
Query: 468 NTDGLVDFSEFVA 480
+ DG + EF
Sbjct: 92 DGDGKIGADEFQE 104
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.4 bits (150), Expect = 4e-12
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 13/163 (7%)
Query: 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 468
+ S D +E+ L +F +D+D +GS+S+EE LP + V ++ D +
Sbjct: 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEF-----MSLPELQQNPLVQRVIDIFDTD 60
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG--- 525
+G VDF EF+ + +K + D + L+M G
Sbjct: 61 GNGEVDFKEFIEGVSQFSV-KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 119
Query: 526 ----LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 564
L+ +D + AD D DGRIS EF ++ I + V
Sbjct: 120 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 162
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 60.5 bits (145), Expect = 9e-12
Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 6/132 (4%)
Query: 425 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484
F IDV+ +G++S EE++ ++K K ++ + +
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQ----LLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 485 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--SIDPLLEEADIDKD 542
++ D + + ++ D+D DG +T EE+ G + + +AD + D
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGD 121
Query: 543 GRISLSEFRRLL 554
G I+L EF
Sbjct: 122 GYITLEEFLEFS 133
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 61.7 bits (149), Expect = 1e-11
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 14/95 (14%)
Query: 422 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 481
F D+DK+GS+S EMR A+ + +KL ++ +++ A + + ++DF FV
Sbjct: 96 LTIFRKFDLDKSGSMSAYEMRMAI-EAAGFKLPC-QLHQVIVARFADDELIIDFDNFVRC 153
Query: 482 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+ + L + F++ D + G I
Sbjct: 154 LVRLEILFK------------IFKQLDPENTGTIQ 176
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 60.9 bits (147), Expect = 2e-11
Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 26/156 (16%)
Query: 412 TLDDEELAD-LRDQFDAIDVDKNGSISLEEMRQALAKDLPW-------KLKESRVLEILQ 463
L +EE+ D + F + + IS++E++ L + + ++
Sbjct: 12 VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVN 70
Query: 464 AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 521
+D + +G + EF + F KFD+D+ G ++ E+R
Sbjct: 71 LMDRDGNGKLGLVEFNILWNRIRNYLTI------------FRKFDLDKSGSMSAYEMRMA 118
Query: 522 ---MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 554
L + ++ D + I F R L
Sbjct: 119 IEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCL 154
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 57.9 bits (140), Expect = 1e-11
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 479
++ F D + +G I +E + + K L ++ V E ++ D + +G++D EF+
Sbjct: 3 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 62
Query: 480 A 480
Sbjct: 63 D 63
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 53.3 bits (128), Expect = 5e-10
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRL 553
AF+ FD + DG I +E + G ++ ++EAD D +G I + EF L
Sbjct: 5 LRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDL 64
Query: 554 LR 555
++
Sbjct: 65 IK 66
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 57.6 bits (139), Expect = 2e-11
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 474
+++AD F D + +G IS E+ AL E R ++ ID + DG +
Sbjct: 2 PQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVR--RMMAEIDTDGDGFIS 59
Query: 475 FSEFVA 480
F EF
Sbjct: 60 FDEFTD 65
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 49.5 bits (118), Expect = 2e-08
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 501 QAAFEKFDIDRDGFITPEELR-----MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
+ F++FD + DG I+ EL + + + ++ E D D DG IS EF R
Sbjct: 9 ERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFAR 68
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 57.3 bits (138), Expect = 3e-11
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E +A+ + FD D D G IS +E+ + + + I++ +D + G
Sbjct: 8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGSGT 66
Query: 473 VDFSEFVA 480
+DF EF+
Sbjct: 67 IDFEEFLV 74
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 47.3 bits (112), Expect = 1e-07
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 554
+AAF+ FD D G I+ +EL + G +D ++EE D D G I EF ++
Sbjct: 17 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 76
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 58.1 bits (140), Expect = 4e-11
Identities = 22/114 (19%), Positives = 35/114 (30%), Gaps = 19/114 (16%)
Query: 453 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 512
L + + + A D +F +K + F D D+
Sbjct: 6 LSAEDIKKAIGA--FTAADSFDHKKFFQMV--------GLKKKSADDVKKVFHILDKDKS 55
Query: 513 GFITPEELR---MHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA 557
GFI +EL L+ D D DG+I + EF L+ +
Sbjct: 56 GFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 51.9 bits (124), Expect = 5e-09
Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDC 467
L + D++ F +D DK+G I +E+ L L ++ A D
Sbjct: 32 MVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDK 91
Query: 468 NTDGLVDFSEFVA 480
+ DG + EF
Sbjct: 92 DGDGKIGVEEFST 104
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 56.5 bits (136), Expect = 6e-11
Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +E++A+ ++ F D D +G+I+ +E+ + L E+ + +++ +D + +G
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGT 60
Query: 473 VDFSEFVA 480
+DF EF+
Sbjct: 61 IDFPEFLT 68
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 43.0 bits (101), Expect = 3e-06
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 554
+ AF FD D DG IT +EL G + ++ E D D +G I EF ++
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 55.6 bits (134), Expect = 1e-10
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
+ + ++ F D D +G+I+++++R+ K+L L E + E++ D N D +
Sbjct: 4 ERDSREEILKAFRLFDDDNSGTITIKDLRRVA-KELGENLTEEELQEMIAEADRNDDNEI 62
Query: 474 DFSEFVA 480
D EF+
Sbjct: 63 DEDEFIR 69
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 54.5 bits (131), Expect = 3e-10
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 490 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDG 543
E DS + AF FD D G IT ++LR G + ++ EAD + D
Sbjct: 4 ERDSRE---EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDN 60
Query: 544 RISLSEFRRLLRTASI 559
I EF R+++ S+
Sbjct: 61 EIDEDEFIRIMKKTSL 76
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 55.8 bits (134), Expect = 1e-10
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 407 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 465
+A L +E+ + + FD + ++GSIS +E+ + + + L + E++ +
Sbjct: 3 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVM-RMLGQNPTPEELQEMIDEV 61
Query: 466 DCNTDGLVDFSEFVA 480
D + G VDF EF+
Sbjct: 62 DEDGSGTVDFDEFLV 76
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 44.6 bits (105), Expect = 1e-06
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 501 QAAFEKFDID-RDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRL 553
+AAF+ F + DG I+ +EL + G + +++E D D G + EF +
Sbjct: 18 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 77
Query: 554 L 554
+
Sbjct: 78 M 78
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (140), Expect = 1e-10
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 21/149 (14%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDG 471
+ L F A+ ++G I +E+++ L + ++ +D + G
Sbjct: 4 QTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSG 62
Query: 472 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGS 529
+ F+EF ++ +H F FD DR G + P+EL+ + T
Sbjct: 63 TMGFNEFKELWAVLNGWRQH------------FISFDTDRSGTVDPQELQKALTTMGFRL 110
Query: 530 IDPLLEE--ADIDKDGRISLSEFRRLLRT 556
+ +G+I+ ++
Sbjct: 111 SPQAVNSIAKRYSTNGKITFDDYIACCVK 139
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (140), Expect = 1e-10
Identities = 22/144 (15%), Positives = 45/144 (31%), Gaps = 25/144 (17%)
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALAK----DLPWKLKESRVLEILQAIDCNTDGLVDFS 476
+ F A+ ++G + EE+++ L + ++ +D + G + F+
Sbjct: 2 VYTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 477 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 536
F + + F D D G + ELR + L +
Sbjct: 61 AFK------------ELWAALNAWKENFMTVDQDGSGTVEHHELRQ--AIGLMGYRLSPQ 106
Query: 537 ------ADIDKDGRISLSEFRRLL 554
K+GRI ++
Sbjct: 107 TLTTIVKRYSKNGRIFFDDYVACC 130
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.2 bits (135), Expect = 6e-10
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 15/93 (16%)
Query: 424 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483
F +D D +G++ E+RQA+ + ++L + I++ +G + F ++VA +
Sbjct: 75 NFMTVDQDGSGTVEHHELRQAI-GLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCV 131
Query: 484 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+ L + F K D + G
Sbjct: 132 KLRALTD------------FFRKRDHLQQGSAN 152
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.3 bits (86), Expect = 0.001
Identities = 15/92 (16%), Positives = 23/92 (25%), Gaps = 1/92 (1%)
Query: 468 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 527
DG VD E L + S + D D G + +
Sbjct: 11 GQDGEVDAEELQRC-LTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL 69
Query: 528 GSIDPLLEEADIDKDGRISLSEFRRLLRTASI 559
+ D D G + E R+ +
Sbjct: 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGY 101
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 57.1 bits (137), Expect = 4e-10
Identities = 26/156 (16%), Positives = 52/156 (33%), Gaps = 26/156 (16%)
Query: 412 TLDDEELAD-LRDQFDAIDVDKNGSISLEEMRQALAKDLPW-------KLKESRVLEILQ 463
++E++ D R F + ++ IS E++ L + L ++
Sbjct: 10 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVD 68
Query: 464 AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 521
+D + G + EF + + Q + + D+DR G + E+R
Sbjct: 69 MLDEDGSGKLGLKEF------------YILWTKIQKYQKIYREIDVDRSGTMNSYEMRKA 116
Query: 522 ---MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 554
L + ++ D + I F R L
Sbjct: 117 LEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCL 152
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 52.1 bits (124), Expect = 2e-08
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 422 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 481
+ + IDVD++G+++ EMR+AL ++ +KL ++ +++ A + + ++DF FV
Sbjct: 94 QKIYREIDVDRSGTMNSYEMRKAL-EEAGFKLPC-QLHQVIVARFADDELIIDFDNFVRC 151
Query: 482 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+ + L + F++ D + G I
Sbjct: 152 LVRLEILFK------------IFKQLDPENTGTIQ 174
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 53.8 bits (129), Expect = 4e-10
Identities = 13/63 (20%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEF 478
+ + F+ D +K+G +SL+E R+ + +++ + ID + +G ++ EF
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVA-LAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
Query: 479 VAA 481
+
Sbjct: 60 TSC 62
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 51.5 bits (123), Expect = 3e-09
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 501 QAAFEKFDIDRDGFITPEELR------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 554
+ FEKFD ++DG ++ +E R + I EE D+D +G ++ EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Query: 555 R 555
Sbjct: 64 E 64
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 36.8 bits (85), Expect = 4e-04
Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 6/64 (9%)
Query: 456 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 515
S + + D N DG + EF FE+ D+D +G +
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREV------ALAFSPYFTQEDIVKFFEEIDVDGNGEL 54
Query: 516 TPEE 519
+E
Sbjct: 55 NADE 58
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 54.2 bits (130), Expect = 4e-10
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 554
F FD + DG+I EEL++ G I+ L+++ D + DGRI EF +
Sbjct: 18 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 77
Query: 555 R 555
+
Sbjct: 78 K 78
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 49.2 bits (117), Expect = 3e-08
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
EE +L D F D + +G I LEE++ L + E + E+++ D N DG +
Sbjct: 12 KTEE--ELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIEELMKDGDKNNDGRI 68
Query: 474 DFSEFVA 480
D+ EF+
Sbjct: 69 DYDEFLE 75
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 35.3 bits (81), Expect = 0.002
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 8/88 (9%)
Query: 441 MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 500
M + + D K +E + ++ + D N DG +D E L+
Sbjct: 1 MVRCMKDDSKGKTEE-ELSDLFRMFDKNADGYIDLEELK------IMLQATGETITEDDI 53
Query: 501 QAAFEKFDIDRDGFITPEE-LRMHTGLK 527
+ + D + DG I +E L G++
Sbjct: 54 EELMKDGDKNNDGRIDYDEFLEFMKGVE 81
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 57.7 bits (138), Expect = 1e-09
Identities = 34/182 (18%), Positives = 61/182 (33%), Gaps = 24/182 (13%)
Query: 402 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEI 461
LR L +E+ LR F + V +G S ++++Q L + E + ++
Sbjct: 105 GYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVL-AKYADTIPEGPLKKL 163
Query: 462 LQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS--------------------- 500
++ +T G + + VA + L + +
Sbjct: 164 FVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKS 223
Query: 501 --QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 558
A F D D + E + L AD DK G++S E +++L A
Sbjct: 224 VQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAH 283
Query: 559 IS 560
I
Sbjct: 284 IP 285
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 51.2 bits (121), Expect = 1e-07
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 7/78 (8%)
Query: 484 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-------MHTGLKGSIDPLLEE 536
V E L + + D D+ G ++ EE++ + + +
Sbjct: 239 DVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSV 298
Query: 537 ADIDKDGRISLSEFRRLL 554
D+D +S EF L+
Sbjct: 299 VDVDDSKSLSYQEFVMLV 316
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 50.4 bits (119), Expect = 3e-07
Identities = 12/56 (21%), Positives = 24/56 (42%)
Query: 425 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 480
+ D DK+G +S EE+++ L + + +D + + + EFV
Sbjct: 259 YAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVM 314
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 52.2 bits (125), Expect = 2e-09
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 554
F FD + DGFI EEL G I+ L++++D + DGRI EF +++
Sbjct: 12 ANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 71
Query: 555 R 555
Sbjct: 72 E 72
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 49.9 bits (119), Expect = 1e-08
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
EE +L + F D + +G I +EE+ + + + E + ++++ D N DG +
Sbjct: 6 KSEE--ELANCFRIFDKNADGFIDIEELGEI-LRATGEHVIEEDIEDLMKDSDKNNDGRI 62
Query: 474 DFSEFVA 480
DF EF+
Sbjct: 63 DFDEFLK 69
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 34.5 bits (79), Expect = 0.003
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 455 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 514
E + + D N DG +D E L + + D + DG
Sbjct: 8 EEELANCFRIFDKNADGFIDIEELG------EILRATGEHVIEEDIEDLMKDSDKNNDGR 61
Query: 515 ITPEE-LRMHTGLK 527
I +E L+M G++
Sbjct: 62 IDFDEFLKMMEGVQ 75
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 52.1 bits (125), Expect = 2e-09
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVD 474
EL + +++ A + +S EE++Q + + P LK R L ++ Q +D N DG V
Sbjct: 7 AELKSIFEKYAAKE-GDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVS 65
Query: 475 FSEFVAATLHVHQ 487
F EF + Q
Sbjct: 66 FEEFQVLVKKISQ 78
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 41.0 bits (96), Expect = 2e-05
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 501 QAAFEKFDI--DRDGFITPEELR--MHTGLKG------SIDPLLEEADIDKDGRISLSEF 550
++ FEK+ ++ EEL+ + ++D L +E D + DG +S EF
Sbjct: 10 KSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEF 69
Query: 551 RRLLR 555
+ L++
Sbjct: 70 QVLVK 74
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 2e-09
Identities = 17/148 (11%), Positives = 33/148 (22%), Gaps = 30/148 (20%)
Query: 428 IDVDKNGSISLEEMRQALAKD-LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 486
+ ++ G I ++ Q D + S D + + + +
Sbjct: 16 MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC 75
Query: 487 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS----------------- 529
E F + ++T E L K
Sbjct: 76 PRPE---------IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQV 126
Query: 530 ---IDPLLEEADIDKDGRISLSEFRRLL 554
ID + G++S L
Sbjct: 127 QGLIDKYEPSGINAQRGQLSPEGMVWFL 154
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 53.5 bits (127), Expect = 3e-09
Identities = 23/149 (15%), Positives = 57/149 (38%), Gaps = 17/149 (11%)
Query: 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 472
L +++ ++++ F IDVD++G +S E+++ + + A+ G
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKEL-----TAMLKEAPGP 55
Query: 473 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR------MHTGL 526
++F+ F ++ + AF FD + E ++
Sbjct: 56 LNFTMF-----LSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFN 110
Query: 527 KGSIDPLLEEADIDKDGRISLSEFRRLLR 555
K + +EA ++ G+ +F +++
Sbjct: 111 KDEMRMTFKEAPVE-GGKFDYVKFTAMIK 138
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.6 bits (127), Expect = 4e-09
Identities = 17/140 (12%), Positives = 42/140 (30%), Gaps = 6/140 (4%)
Query: 421 LRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEF 478
+D F D G+I+ + + L P ++ ++ + +D
Sbjct: 4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITG 63
Query: 479 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE-ELRMHTGLKGS---IDPLL 534
+ ++ + + + G K + +D LL
Sbjct: 64 LIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELL 123
Query: 535 EEADIDKDGRISLSEFRRLL 554
+ ++D +G I +F +
Sbjct: 124 KGVEVDSNGEIDYKKFIEDV 143
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 53.4 bits (127), Expect = 5e-09
Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 25/151 (16%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-------KLKESRVLEILQAIDCN 468
EE+ R F + + +S E+ L K + ++ +D +
Sbjct: 1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-----MH 523
T G + F EF + QA +++FD+DR G I EL
Sbjct: 60 TTGKLGFEEF------------KYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAG 107
Query: 524 TGLKGSIDPLLEEADIDKDGRISLSEFRRLL 554
L + ++ D+ G + F L
Sbjct: 108 FHLNEHLYSMIIRRYSDEGGNMDFDNFISCL 138
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 49.5 bits (117), Expect = 1e-07
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Query: 422 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 481
+ + DVD++G+I E+ A + + L E I++ G +DF F++
Sbjct: 80 QAIYKQFDVDRSGTIGSSELPGAF-EAAGFHLNEHLYSMIIRRYSDE-GGNMDFDNFISC 137
Query: 482 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 516
+ + + AF+ D D G I
Sbjct: 138 LVRLDAMFR------------AFKSLDKDGTGQIQ 160
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 52.7 bits (125), Expect = 6e-09
Identities = 23/151 (15%), Positives = 55/151 (36%), Gaps = 10/151 (6%)
Query: 413 LDDEELADLRDQFDAIDVDKN--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 470
L +E+ DL+D F+ D G++ ++ + L + V + +
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVC-RCLGINPRNEDVFAV-GGTHKMGE 58
Query: 471 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS- 529
+ F EF+ A + E+ + + F++ + G + S
Sbjct: 59 KSLPFEEFLPAYEGLMDCEQGTFADYMEAFK-TFDREGQGFISGAELRHVLTALGERLSD 117
Query: 530 --IDPLLEEADI--DKDGRISLSEFRRLLRT 556
+D +++ D+ D +G + +F + +
Sbjct: 118 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.8 bits (121), Expect = 9e-09
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 15/83 (18%)
Query: 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK---------------DLPWKLKESRVL 459
D + + F D++ +G + +E+ K + +
Sbjct: 12 DPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMRE 71
Query: 460 EILQAIDCNTDGLVDFSEFVAAT 482
+++ +D N D LV EF+A+T
Sbjct: 72 HVMKNVDTNQDRLVTLEEFLAST 94
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.5 bits (115), Expect = 7e-08
Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 24/92 (26%)
Query: 486 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR----------------------MH 523
+L+ D +++ + F DI+ DG + +EL M
Sbjct: 6 EELDGLDPNRFNPK--TFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREME 63
Query: 524 TGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 555
+ +++ D ++D ++L EF +
Sbjct: 64 EERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 95
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 50.0 bits (119), Expect = 2e-08
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTD 470
+ + + F DK G ++ E++R + K+ P + V +I++ +D D
Sbjct: 5 EHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRD 63
Query: 471 GLVDFSEFVA 480
G V F F +
Sbjct: 64 GKVGFQSFFS 73
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 38.0 bits (88), Expect = 3e-04
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 502 AAFEKFDIDRDGFITPEELR-----------MHTGLKGSIDPLLEEADIDKDGRISLSEF 550
F KF D G++T E+LR + ++D ++++ D +DG++ F
Sbjct: 13 FTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSF 71
Query: 551 RRLL 554
L+
Sbjct: 72 FSLI 75
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.0 bits (123), Expect = 2e-08
Identities = 29/164 (17%), Positives = 49/164 (29%), Gaps = 24/164 (14%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 469
A+ + + L + F +D D++G IS E++QAL+ V I+ D
Sbjct: 10 AAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDREN 69
Query: 470 DGLVD------------------------FSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 505
V+ S + L
Sbjct: 70 KAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIR 129
Query: 506 KFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSE 549
KFD G I ++ + + + D D+DG I +S
Sbjct: 130 KFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSY 173
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 48.7 bits (116), Expect = 3e-08
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 416 EELADLRDQFDA-IDVDKNGSI-SLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 473
+ L + D + + N +++++ L + P +++ + +D NTDG V
Sbjct: 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAV 66
Query: 474 DFSEFVA 480
+F EF+
Sbjct: 67 NFQEFLI 73
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 35.2 bits (81), Expect = 0.002
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Query: 502 AAFEKF-DIDRDGFI-TPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRR 552
+ K+ I + ++L+ K D +E DI+ DG ++ EF
Sbjct: 14 DVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLI 73
Query: 553 LL 554
L+
Sbjct: 74 LV 75
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.7 bits (113), Expect = 5e-08
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 479
++R+ F D D NG IS E+R +L KL + V E+++ D + DG V++ EFV
Sbjct: 4 EIREAFRVFDKDGNGYISAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 62
Query: 480 A 480
Sbjct: 63 Q 63
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.0 bits (106), Expect = 5e-07
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 554
+ AF FD D +G+I+ ELR G +D ++ EADID DG+++ EF +++
Sbjct: 6 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 49.6 bits (117), Expect = 6e-08
Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 9/142 (6%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 475
+ + + F D G I + DL ++ L + I+ VD
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSI-----GDLLRACGQNPTLAEITEIESTLPAEVDM 56
Query: 476 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS---IDP 532
+F+ + + + ++ F+K G + G K S +D
Sbjct: 57 EQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDE 116
Query: 533 LLEEADIDKDGRISLSEFRRLL 554
LL+ + DG ++ +F +++
Sbjct: 117 LLKGVPVK-DGMVNYHDFVQMI 137
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 46.9 bits (111), Expect = 9e-08
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 479
D F D + G +S+ ++R L L KL ++ V E+L+ ++ +++G +D+ +F+
Sbjct: 2 DFVKAFQVFDKESTGKVSVGDLRYML-TGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.6 bits (97), Expect = 8e-06
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 501 QAAFEKFDIDRDGFITPE---ELRMHTGLKGS---IDPLLEEADIDKDGRISLSEF 550
AF+ FD + G ++ + G K + +D LL+ ++D +G I +F
Sbjct: 4 VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 59
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 47.3 bits (112), Expect = 2e-07
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW------KLKESRVLEILQ 463
++T + + + D F ++ I + + ++ P K + + ++ +
Sbjct: 1 SNTQAERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFE 59
Query: 464 AIDCNTDGLVDFSEFV 479
D N D +DFSEF+
Sbjct: 60 KKDKNEDKKIDFSEFL 75
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 46.8 bits (111), Expect = 3e-07
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNG---SISLEEMRQALAKDLPW----KLKESRVLEIL 462
A L+ + L + F K G ++ E+++ L ++LP + E+ +++
Sbjct: 1 ACPLE-KALDVMVSTFHKYS-GKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLM 58
Query: 463 QAIDCNTDGLVDFSEFVA 480
+D N D VDF E+
Sbjct: 59 SNLDSNRDNEVDFQEYCV 76
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 39.1 bits (91), Expect = 1e-04
Identities = 10/72 (13%), Positives = 25/72 (34%), Gaps = 15/72 (20%)
Query: 502 AAFEKFDIDRDG---FITPEELR-----------MHTGLKGSIDPLLEEADIDKDGRISL 547
+ F K+ ++G + EL+ + + L+ D ++D +
Sbjct: 13 STFHKYS-GKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDF 71
Query: 548 SEFRRLLRTASI 559
E+ L ++
Sbjct: 72 QEYCVFLSCIAM 83
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 46.1 bits (109), Expect = 3e-07
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK-DLPWKLKESRVLEILQAIDCNTDGLV 473
EE+ + F A + D IS EE++ + S + E+++ +D N DG V
Sbjct: 4 PEEIKGAFEVFAAKEGD-PNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEV 62
Query: 474 DFSEFVA 480
F EF+
Sbjct: 63 SFEEFLV 69
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.7 bits (95), Expect = 2e-05
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 501 QAAFEKFDID--RDGFITPEELR--------MHTGLKGSIDPLLEEADIDKDGRISLSEF 550
+ AFE F I+ EEL+ ++D ++EE D + DG +S EF
Sbjct: 8 KGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEF 67
Query: 551 RRLLRTAS 558
+++ S
Sbjct: 68 LVMMKKIS 75
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 45.6 bits (108), Expect = 7e-07
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 416 EELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGL 472
E + + F A + S+S+ E ++ + + LP LK+ L E ++++D N D
Sbjct: 11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSE 70
Query: 473 VDFSEFVA 480
+ F+E+
Sbjct: 71 LKFNEYWR 78
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 36.0 bits (83), Expect = 0.002
Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 502 AAFEKFDIDRDG---FITPEELR--------MHTGLKGSIDPLLEEADIDKDGRISLSEF 550
F F ++G ++ E + GS+D ++ D+++D + +E+
Sbjct: 18 TTFFTFA-RQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEY 76
Query: 551 RRLL 554
RL+
Sbjct: 77 WRLI 80
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 44.8 bits (106), Expect = 1e-06
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 415 DEELADLRDQFDAIDVDKNG---SISLEEMRQALAKDLP----WKLKESRVLEILQAIDC 467
++ +A + F + G + E+++ L K+L + +E + + +D
Sbjct: 5 EQAVAAIVCTFQEYA-GRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDT 63
Query: 468 NTDGLVDFSEFVA 480
N D VDF E+V
Sbjct: 64 NKDCEVDFVEYVR 76
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 35.6 bits (82), Expect = 0.002
Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 13/66 (19%)
Query: 502 AAFEKF-DIDRDGF-ITPEELR-----------MHTGLKGSIDPLLEEADIDKDGRISLS 548
F+++ D + + EL+ + + + D +KD +
Sbjct: 13 CTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFV 72
Query: 549 EFRRLL 554
E+ R L
Sbjct: 73 EYVRSL 78
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 46.6 bits (109), Expect = 1e-06
Identities = 23/162 (14%), Positives = 50/162 (30%), Gaps = 25/162 (15%)
Query: 410 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-------DLPWKLKESRVLEIL 462
A ++D + +L + F A+D D +G+IS+ E+ AL+ KL
Sbjct: 11 ARHMNDNQ--ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHS 68
Query: 463 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD-------------- 508
I + + + D +AA
Sbjct: 69 GEITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRK 128
Query: 509 --IDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLS 548
R G + ++ + + + D ++ G+++ +
Sbjct: 129 FDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFT 170
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 43.4 bits (102), Expect = 4e-06
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDG 471
E L ++ + DK +S +E++ L +L + V +I++ +D N DG
Sbjct: 9 ETLINVFHAHSGKEGDK-YKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDG 67
Query: 472 LVDFSEFVA 480
VDF EFV
Sbjct: 68 EVDFQEFVV 76
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 36.5 bits (84), Expect = 0.001
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 15/67 (22%)
Query: 502 AAFEKFDIDRDG---FITPEELRMHTGLKGS-----------IDPLLEEADIDKDGRISL 547
F ++G ++ +EL+ + S +D +++E D + DG +
Sbjct: 13 NVFHAHS-GKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDF 71
Query: 548 SEFRRLL 554
EF L+
Sbjct: 72 QEFVVLV 78
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (100), Expect = 5e-06
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 479
+ +F+ D K +IS EE R + L + + + + N G + + +F+
Sbjct: 21 AITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 79
Query: 480 AA 481
+
Sbjct: 80 SR 81
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.7 bits (79), Expect = 0.004
Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Query: 487 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGSIDPLLEEA---DID 540
+L + + +H FE FD + I+ EE R + + ++
Sbjct: 10 RLHKAVTSHYH-AITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVN 68
Query: 541 KDGRISLSEFRRLL 554
GR+ +F
Sbjct: 69 AKGRLKYPDFLSRF 82
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.9 bits (98), Expect = 1e-05
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
+ E+ A FD++ NG +S ++++ L KL + + + D + DG
Sbjct: 3 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN---SKLPVDILGRVWELSDIDHDG 58
Query: 472 LVDFSEFVAA 481
++D EF A
Sbjct: 59 MLDRDEFAVA 68
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.8 bits (95), Expect = 3e-05
Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Query: 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
+ E A + F D D +G +S E+R+ L L + + I D G
Sbjct: 3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIF---LKTGLPSTLLAHIWSLCDTKDCG 59
Query: 472 LVDFSEFVAATLHVHQ 487
+ +F A + Q
Sbjct: 60 KLSKDQFALAFHLISQ 75
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (90), Expect = 2e-04
Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE----EADIDKDGRISLSEF---RRL 553
F K D D DGF++ E+R G LL D G++S +F L
Sbjct: 13 DEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72
Query: 554 LRTASISSRNVPPS 567
+ I + P
Sbjct: 73 ISQKLIKGIDPPHV 86
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 39.8 bits (93), Expect = 5e-05
Identities = 15/70 (21%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 415 DEELADLRDQFDA-IDVDKNG-SISLEEMRQALAKD--LPWKLKESRVLEILQAIDCNTD 470
D+ + L F + + ++S +E+++ + K+ + KL+++ + +++ +D N D
Sbjct: 5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKD 64
Query: 471 GLVDFSEFVA 480
V+F E+V
Sbjct: 65 QEVNFQEYVT 74
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 39.4 bits (92), Expect = 8e-05
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 415 DEELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCN 468
+E L + + F ++ ++S E++Q L K+L ++ + EI Q +D N
Sbjct: 4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN 63
Query: 469 TDGLVDFSEFV 479
D VDF EF+
Sbjct: 64 QDEQVDFQEFI 74
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Score = 39.0 bits (91), Expect = 1e-04
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 471
E L + + D + IS E + +L + + + +++ +D ++DG
Sbjct: 9 ESLIAIFQKHAGRDGNNT-KISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDG 67
Query: 472 LVDFSEFV 479
+DF EF+
Sbjct: 68 QLDFQEFL 75
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Score = 38.6 bits (90), Expect = 1e-04
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 471
L D+ Q+ + DK+ + E+++ + +L L+E + V ++++ +D + DG
Sbjct: 9 VALIDVFHQYSGREGDKH-KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDG 67
Query: 472 LVDFSEFV 479
DF EF+
Sbjct: 68 ECDFQEFM 75
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 38.5 bits (89), Expect = 2e-04
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 471
+ DE+ +QF I D NG I ++ K KL + I + D + DG
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK---SKLPILELSHIWELSDFDKDG 58
Query: 472 LVDFSEFVAA 481
+ EF AA
Sbjct: 59 ALTLDEFCAA 68
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 38.9 bits (90), Expect = 2e-04
Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 501 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE----ADIDKDGRISLSEFRRLLRT 556
+ + + + G + + G D +L + AD D G +S EF LR
Sbjct: 14 EKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73
Query: 557 ASISSRNVPPSPS 569
+ + + S S
Sbjct: 74 VACAQNGLEVSLS 86
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} Length = 151 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (91), Expect = 3e-04
Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 484 HVHQLEEHDSEKWHLRSQAA----FEKFDIDR-DGFITPEEL----RMHTGLKGSIDPLL 534
H +L D EK + F + D DG+++ EL ++
Sbjct: 59 HPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFF 118
Query: 535 EEADIDKDGRISLSEF 550
E D+D D I+L E+
Sbjct: 119 ETCDLDNDKYIALDEW 134
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Score = 37.4 bits (87), Expect = 5e-04
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 427 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 479
+ +++ E++ + K+LP L+ + V ++L+ +D N D VDFSEF+
Sbjct: 19 SGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFI 75
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Score = 35.4 bits (82), Expect = 0.002
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 431 DKNGSISLEEMRQALAKDLPWKLK-----ESRVLEILQAIDCNTDGLVDFSEFV 479
+++ E ++ + KDL LK E + I++ +D N D + F EF+
Sbjct: 24 GHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 77
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 33.0 bits (76), Expect = 0.003
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 503 AFEKFDIDRDGFITPEELR 521
AF FD D +G+I+ ELR
Sbjct: 8 AFRVFDKDGNGYISAAELR 26
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 577 | |||
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.93 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.87 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.86 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.86 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.86 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.86 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.85 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.85 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.84 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 99.84 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 99.83 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.83 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 99.82 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 99.82 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.82 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.8 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 99.78 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 99.78 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.77 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.77 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.77 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.77 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.77 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.75 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.75 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 99.75 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.73 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.73 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 99.73 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.73 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 99.71 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.71 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.71 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 99.71 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.7 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 99.68 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.67 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.67 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.64 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.58 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.56 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.52 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.48 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.46 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.45 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.45 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.44 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.43 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.41 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.4 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.4 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.4 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.37 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.34 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.34 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.33 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.33 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.33 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.31 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.3 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.3 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.3 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.29 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.28 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.28 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.27 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.27 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.26 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.26 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.25 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.25 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.24 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.22 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.21 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.21 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.2 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.19 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.17 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.15 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 99.15 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.14 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.13 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.12 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.11 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.11 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.1 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.1 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.1 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 99.08 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.07 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.05 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 99.05 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.04 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.01 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 99.01 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 99.01 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.0 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.99 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.98 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.98 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.96 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.95 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.94 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.94 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.94 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 98.94 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.94 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 98.93 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.93 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.93 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.93 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.92 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.9 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.9 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.89 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.89 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 98.86 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.85 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 98.84 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.82 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 98.81 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.81 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 98.79 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 98.79 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.79 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.79 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 98.77 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 98.77 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.75 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 98.75 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 98.74 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 98.74 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.73 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.72 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.71 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 98.7 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.69 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.69 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.68 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 98.65 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 98.64 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 98.64 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.64 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 98.64 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 98.56 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 98.5 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.49 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.42 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.29 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.29 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.26 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 98.24 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.18 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.18 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.13 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.12 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.06 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 98.06 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 98.05 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.98 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 97.97 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.96 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.95 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 97.8 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 97.18 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.14 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.06 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.13 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 96.1 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 93.08 | |
| d1h8ba_ | 73 | alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | 93.03 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 90.01 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 89.87 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 89.53 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 88.96 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 88.35 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 86.47 | |
| d1h8ba_ | 73 | alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | 86.2 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.5e-62 Score=488.26 Aligned_cols=266 Identities=40% Similarity=0.721 Sum_probs=221.6
Q ss_pred cccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 92 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
+++.++|++++.||+|+||+||+|+++.+|+.||||++.+.... .....+.+|+.+|+++ +|||||++++++.+++.
T Consensus 5 edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 81 (307)
T d1a06a_ 5 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE--GKEGSMENEIAVLHKI-KHPNIVALDDIYESGGH 81 (307)
T ss_dssp SCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred CCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh--hHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence 45677899999999999999999999999999999999765432 2345688999999999 59999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+|||||||+||+|.+++. ....+++..++.++.||+.||.|||++|||||||||+|||+...+
T Consensus 82 ~~lvmE~~~gg~L~~~l~-----------------~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~ 144 (307)
T d1a06a_ 82 LYLIMQLVSGGELFDRIV-----------------EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD 144 (307)
T ss_dssp EEEEECCCCSCBHHHHHH-----------------TCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS
T ss_pred EEEEEeccCCCcHHHhhh-----------------cccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccC
Confidence 999999999999998774 346899999999999999999999999999999999999998655
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
+++.+||+|||+|+...........+||+.|+|||++.+. ++.++|||||||++|+|++|++||.+....+....+...
T Consensus 145 ~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~ 224 (307)
T d1a06a_ 145 EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA 224 (307)
T ss_dssp TTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTT
T ss_pred CCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhcc
Confidence 6789999999999987766666778999999999998765 689999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
...++.+.++.+|+++.+||.+||.+||.+|||+.|+|+||||+...
T Consensus 225 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~ 271 (307)
T d1a06a_ 225 EYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT 271 (307)
T ss_dssp CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSSC
T ss_pred CCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence 88887777888999999999999999999999999999999998643
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-61 Score=470.71 Aligned_cols=255 Identities=29% Similarity=0.576 Sum_probs=228.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+++++++ +|||||++++++.+++.+|||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-CCCCCCeEEEEEEECCEEEEE
Confidence 4699999999999999999999999999999999765433334567789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ..+++..++.++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 85 mEy~~~g~L~~~l~~~-----------------~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~ 144 (263)
T d2j4za1 85 LEYAPLGTVYRELQKL-----------------SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGE 144 (263)
T ss_dssp EECCTTCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSC
T ss_pred EeecCCCcHHHHHhhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceec---CCCC
Confidence 9999999999887543 6799999999999999999999999999999999999998 4788
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||+|...... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+....+.+
T Consensus 145 ~kl~DFG~a~~~~~~-~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~ 223 (263)
T d2j4za1 145 LKIADFGWSVHAPSS-RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 223 (263)
T ss_dssp EEECCCCSCSCCCCC-CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC
T ss_pred EeecccceeeecCCC-cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 999999999876543 34567899999999999875 5889999999999999999999999999999999888876554
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
+ +.+|+++.+||.+||+.||.+|||+.|+|+||||+..
T Consensus 224 p----~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~~ 261 (263)
T d2j4za1 224 P----DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 261 (263)
T ss_dssp C----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred C----ccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCCc
Confidence 3 4589999999999999999999999999999999853
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-61 Score=469.82 Aligned_cols=259 Identities=33% Similarity=0.575 Sum_probs=217.8
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+-++|++++.||+|+||+||+|+++.+|+.||||++..... ....+.+.+|+.+|+++ +|||||++++++.+++.+|
T Consensus 3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~~l~~l-~HpnIv~~~~~~~~~~~~~ 79 (271)
T d1nvra_ 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY 79 (271)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHhC-CCCCEeeEeeeeccCceeE
Confidence 34579999999999999999999999999999999976542 22446789999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||||||+||+|.+++. ....+++..++.++.||+.||.|||++|||||||||+|||++ .+
T Consensus 80 ivmEy~~gg~L~~~l~-----------------~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~---~~ 139 (271)
T d1nvra_ 80 LFLEYCSGGELFDRIE-----------------PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ER 139 (271)
T ss_dssp EEEECCTTEEGGGGSB-----------------TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TT
T ss_pred EEEeccCCCcHHHHHh-----------------cCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEEC---CC
Confidence 9999999999988552 346799999999999999999999999999999999999998 46
Q ss_pred CCeeEEecCCCcccCCCC---CccccccCCccccchhcccC-C-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+.+||+|||+|+...... .....+||+.|||||++.+. + +.++|||||||++|+|++|++||.............
T Consensus 140 ~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~ 219 (271)
T d1nvra_ 140 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 219 (271)
T ss_dssp CCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHH
T ss_pred CCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 889999999998764332 24567899999999998765 3 567999999999999999999998765544333333
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
..... ....++.+|+++.+||.+||+.||++|||+.|+|+||||++.
T Consensus 220 ~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~ 266 (271)
T d1nvra_ 220 KEKKT-YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266 (271)
T ss_dssp HTTCT-TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred hcCCC-CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence 33322 234457789999999999999999999999999999999864
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-60 Score=469.15 Aligned_cols=266 Identities=36% Similarity=0.635 Sum_probs=237.2
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc---hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL---PIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~---~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.+.++|++++.||+|+||+||+|+++.+|+.||||++.+..... ....+.+.+|+.+|++| +|||||+++++|.++
T Consensus 7 ~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~ 85 (293)
T d1jksa_ 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENK 85 (293)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred CcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEEC
Confidence 46678999999999999999999999999999999997654322 22467899999999999 599999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+.+|||||||+||+|.+++... ..+++..++.++.||+.||.|||++|||||||||+|||++.
T Consensus 86 ~~~~iv~E~~~gg~L~~~i~~~-----------------~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~ 148 (293)
T d1jksa_ 86 TDVILILELVAGGELFDFLAEK-----------------ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD 148 (293)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESC
T ss_pred CEEEEEEEcCCCccccchhccc-----------------cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEec
Confidence 9999999999999999987543 67999999999999999999999999999999999999985
Q ss_pred CC-CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 250 AK-EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 250 ~~-~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.+ ....+||+|||+|.............||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+
T Consensus 149 ~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i 228 (293)
T d1jksa_ 149 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 228 (293)
T ss_dssp SSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 32 1236999999999988776667778999999999998765 689999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
......++...++.+|+++.+||.+||+.||.+|||+.++|+||||+..
T Consensus 229 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 277 (293)
T d1jksa_ 229 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277 (293)
T ss_dssp HTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred HhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 8887776665567899999999999999999999999999999999864
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.8e-59 Score=460.67 Aligned_cols=263 Identities=33% Similarity=0.623 Sum_probs=237.1
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCc------hhhHHHHHHHHHHHHHhcCCCCeeEEEEEEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMIL------PIAVEDVKREVKILQALAGHENVVKFYNAFE 167 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~------~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 167 (577)
|.++|++++.||+|+||+||+|+++.+|+.||||++.+..... ....+.+.+|+.++++|..|||||++++++.
T Consensus 1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 80 (277)
T d1phka_ 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 80 (277)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence 3568999999999999999999999999999999997654322 1234568899999999977999999999999
Q ss_pred cCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 168 DDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 168 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
+++.+|||||||+||+|.+++... ..+++..++.++.||+.||+|||++|||||||||+|||+
T Consensus 81 ~~~~~~ivmE~~~~g~L~~~l~~~-----------------~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill 143 (277)
T d1phka_ 81 TNTFFFLVFDLMKKGELFDYLTEK-----------------VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 143 (277)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred cCcceEEEEEcCCCchHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE
Confidence 999999999999999999988544 679999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-------CCCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||+|+.+.........+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.
T Consensus 144 ~---~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~ 220 (277)
T d1phka_ 144 D---DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 220 (277)
T ss_dssp C---TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred c---CCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCH
Confidence 8 588999999999998876666677899999999998753 247789999999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.+.+..++.+...++...++.+|+++.+||.+||+.||.+|||+.++|+||||+++
T Consensus 221 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~ 276 (277)
T d1phka_ 221 MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 276 (277)
T ss_dssp HHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred HHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence 99999999988877777778899999999999999999999999999999999864
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-60 Score=466.65 Aligned_cols=257 Identities=28% Similarity=0.493 Sum_probs=224.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++++.||+|+||+||+|+++.+|+.||||++...... ..+.+.+|+.+++++ +|||||+++++|.+++.+||
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~i 94 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMREN-KNPNIVNYLDSYLVGDELWV 94 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh---HHHHHHHHHHHHHhC-CCCCEeeEeEEEEECCEEEE
Confidence 35799999999999999999999999999999998765432 356789999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||+||+|.+.+. ...+++..++.++.||+.||.|||++|||||||||+|||++ .++
T Consensus 95 vmEy~~gg~L~~~~~------------------~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~ 153 (293)
T d1yhwa1 95 VMEYLAGGSLTDVVT------------------ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDG 153 (293)
T ss_dssp EEECCTTCBHHHHHH------------------HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTC
T ss_pred EEEecCCCcHHHHhh------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEEC---CCC
Confidence 999999999987542 24689999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCC-CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||+|+.+... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 154 ~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~ 233 (293)
T d1yhwa1 154 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 233 (293)
T ss_dssp CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS
T ss_pred cEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC
Confidence 9999999999876543 344567899999999998765 58899999999999999999999999888777777665433
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
. ....++.+|+++++||.+||..||.+|||+.|+|+||||+...
T Consensus 234 ~-~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~~ 277 (293)
T d1yhwa1 234 P-ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277 (293)
T ss_dssp C-CCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred C-CCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCC
Confidence 2 2223467899999999999999999999999999999998543
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=1.3e-59 Score=476.97 Aligned_cols=264 Identities=36% Similarity=0.600 Sum_probs=237.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+.++|++++.||+|+||.||+|+++.+|+.||||++.+.. ......+.+|+.+|++| +|||||+++++|.+++.+|
T Consensus 27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ 102 (352)
T d1koba_ 27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMV 102 (352)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc---hhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEE
Confidence 3457999999999999999999999999999999987653 23456788999999999 5999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||||||+||+|.+.+.. ....+++.+++.++.||+.||.|||++|||||||||+||||+. ..+
T Consensus 103 ivmE~~~gg~L~~~~~~----------------~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~-~~~ 165 (352)
T d1koba_ 103 LILEFLSGGELFDRIAA----------------EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKA 165 (352)
T ss_dssp EEEECCCCCBHHHHTTC----------------TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTC
T ss_pred EEEEcCCCChHHHHHHh----------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc-cCC
Confidence 99999999999875532 2357999999999999999999999999999999999999974 246
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+.+||+|||+|............+||+.|+|||++.+. ++.++|||||||++|+|+||+.||.+.+..+.+..+.....
T Consensus 166 ~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~ 245 (352)
T d1koba_ 166 SSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW 245 (352)
T ss_dssp CCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC
T ss_pred CeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence 79999999999988776666778999999999998765 58899999999999999999999999999999999999888
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.++...++.+|+++.+||.+||+.||.+|||+.|+|+||||+....
T Consensus 246 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~ 291 (352)
T d1koba_ 246 EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 291 (352)
T ss_dssp CCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCcc
Confidence 8887778899999999999999999999999999999999987543
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-60 Score=466.48 Aligned_cols=256 Identities=33% Similarity=0.579 Sum_probs=225.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+++|+++ +|||||+++++|.+++.+|||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~iv 86 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFG 86 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CSTTBCCEEEEEECSSEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-CCCCeeEEEEEEEECCEEEEE
Confidence 4699999999999999999999999999999999765433334567899999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ..+++..++.++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 87 mEy~~gg~L~~~~~~~-----------------~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~---~~~~ 146 (288)
T d1uu3a_ 87 LSYAKNGELLKYIRKI-----------------GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMH 146 (288)
T ss_dssp ECCCTTEEHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSC
T ss_pred EEccCCCCHHHhhhcc-----------------CCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccC---CCce
Confidence 9999999999876543 6799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC---CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||+|+.+... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+++.++....
T Consensus 147 vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~ 226 (288)
T d1uu3a_ 147 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 226 (288)
T ss_dssp EEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTC
T ss_pred EEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCC
Confidence 999999999876432 223457899999999998764 6889999999999999999999999999999999998876
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHH------HhcCcccccc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ------ALSHPWVREG 376 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~------il~hp~f~~~ 376 (577)
..++ ..+|+++.+||.+||+.||.+|||++| +++||||+..
T Consensus 227 ~~~p----~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i 273 (288)
T d1uu3a_ 227 YDFP----EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273 (288)
T ss_dssp CCCC----TTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred CCCC----ccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence 6544 468999999999999999999999987 5889999864
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.3e-59 Score=476.74 Aligned_cols=263 Identities=35% Similarity=0.630 Sum_probs=237.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+-++|++++.||+|+||.||+|+++.+|+.||||++.... ....+.+.+|+.+|++|. |||||+++++|.+++.+|
T Consensus 24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~ 99 (350)
T d1koaa2 24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMV 99 (350)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS---HHHHHHHHHHHHHHHHTC-CTTBCCEEEEEEETTEEE
T ss_pred CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc---hhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 3458999999999999999999999999999999997653 235677899999999995 999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
||||||+||+|.+++.. ....+++..++.++.||+.||.|||++|||||||||+|||++. +.+
T Consensus 100 ivmE~~~gg~L~~~l~~----------------~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~-~~~ 162 (350)
T d1koaa2 100 MIYEFMSGGELFEKVAD----------------EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRS 162 (350)
T ss_dssp EEECCCCSCBHHHHHTC----------------TTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTS
T ss_pred EEEEcCCCCCHHHHHHh----------------hcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc-CCC
Confidence 99999999999887632 2357999999999999999999999999999999999999974 235
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+.+||+|||+|+.+.........+||+.|||||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 163 ~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~ 242 (350)
T d1koaa2 163 NELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW 242 (350)
T ss_dssp CCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred CeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence 78999999999988776666778999999999998765 58899999999999999999999999999999999998887
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.++...++.+|+++.+||.+||+.||.+|||+.|+|+||||+...
T Consensus 243 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~ 287 (350)
T d1koaa2 243 NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 287 (350)
T ss_dssp CSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 777666778999999999999999999999999999999999754
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-59 Score=465.07 Aligned_cols=258 Identities=31% Similarity=0.479 Sum_probs=225.2
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.+.|++++.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|+++|+++ +|||||++++++.+++.+||
T Consensus 11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~l 86 (288)
T d2jfla1 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWI 86 (288)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS---SGGGGGTHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC---HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCeEEE
Confidence 356999999999999999999999999999999987653 23456788999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||+||+|.+++... ...+++..++.++.||+.||.|||++|||||||||+|||++ .++
T Consensus 87 vmEy~~~g~L~~~~~~~----------------~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~---~~~ 147 (288)
T d2jfla1 87 LIEFCAGGAVDAVMLEL----------------ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDG 147 (288)
T ss_dssp EEECCTTEEHHHHHHHH----------------TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTS
T ss_pred EEecCCCCcHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC---CCC
Confidence 99999999998876433 36799999999999999999999999999999999999998 478
Q ss_pred CeeEEecCCCcccCCC-CCccccccCCccccchhcc------cCCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 255 SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.+||+|||+|+..... ......+||+.|+|||++. ..++.++|||||||++|+|++|++||.+.+..+.+..+
T Consensus 148 ~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i 227 (288)
T d2jfla1 148 DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 227 (288)
T ss_dssp CEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH
T ss_pred CEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHH
Confidence 8999999999765322 2234578999999999874 23578999999999999999999999999999999888
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
....+... ..++.+|+++.+||.+||+.||.+|||+.|+|+||||+..
T Consensus 228 ~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~ 275 (288)
T d2jfla1 228 AKSEPPTL-AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275 (288)
T ss_dssp HHSCCCCC-SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred HcCCCCCC-CccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 88764332 2235689999999999999999999999999999999853
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-59 Score=456.29 Aligned_cols=253 Identities=21% Similarity=0.351 Sum_probs=217.4
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----CCeEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DNYVY 173 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~~~~~ 173 (577)
|++.+.||+|+||+||+|+++.+++.||+|++...... ....+.+.+|+++|+++. |||||+++++|.+ +..+|
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~-~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~~~ 88 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIV 88 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhCC-CCCeeeEEEEEeeccccCCEEE
Confidence 47888999999999999999999999999998765442 345678999999999995 9999999999864 45789
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--ceeccCCCCcEEeecCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAK 251 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~--iiHrDlKp~NILl~~~~ 251 (577)
||||||++|+|.+++... ..+++..++.++.||+.||.|||+++ ||||||||+|||++.
T Consensus 89 ivmE~~~~g~L~~~l~~~-----------------~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~-- 149 (270)
T d1t4ha_ 89 LVTELMTSGTLKTYLKRF-----------------KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG-- 149 (270)
T ss_dssp EEEECCCSCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS--
T ss_pred EEEeCCCCCcHHHHHhcc-----------------ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeC--
Confidence 999999999999887543 67899999999999999999999998 999999999999973
Q ss_pred CCCCeeEEecCCCcccCCCCCccccccCCccccchhcccCCCCCCchhhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhC
Q 008127 252 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN 330 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-~~~~~~i~~~ 330 (577)
.++.+||+|||+|+.... ......+||+.|+|||++.+.++.++|||||||++|+|++|+.||.+... ..++..+..+
T Consensus 150 ~~~~~Kl~DFGla~~~~~-~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~ 228 (270)
T d1t4ha_ 150 PTGSVKIGDLGLATLKRA-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG 228 (270)
T ss_dssp TTSCEEECCTTGGGGCCT-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT
T ss_pred CCCCEEEeecCcceeccC-CccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcC
Confidence 467899999999986543 34456789999999999999999999999999999999999999977654 4455555543
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
... ......+++++.+||.+||.+||++|||+.|+|+||||+
T Consensus 229 ~~~--~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 229 VKP--ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp CCC--GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred CCC--cccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 321 222345789999999999999999999999999999996
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.2e-59 Score=467.02 Aligned_cols=259 Identities=27% Similarity=0.433 Sum_probs=227.3
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
++.+.|++++.||+|+||+||+|+++.+|+.||||++...........+.+.+|+.+|++| +|||||+++++|.+++.+
T Consensus 12 dp~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~ 90 (309)
T d1u5ra_ 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTA 90 (309)
T ss_dssp CHHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEE
T ss_pred CcHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEECCEE
Confidence 3456799999999999999999999999999999999876655555677899999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|||||||++|+|...+. ....+++..++.++.||+.||.|||++|||||||||+|||++ .
T Consensus 91 ~iv~E~~~~g~l~~~~~-----------------~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~ 150 (309)
T d1u5ra_ 91 WLVMEYCLGSASDLLEV-----------------HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---E 150 (309)
T ss_dssp EEEEECCSEEHHHHHHH-----------------HTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---T
T ss_pred EEEEEecCCCchHHHHH-----------------hCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEC---C
Confidence 99999999998865432 246799999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
++.+||+|||+|..... ....+||+.|+|||++.+ .++.++|||||||++|||++|..||.+.+..+.+..+.
T Consensus 151 ~~~~Kl~DFG~a~~~~~---~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~ 227 (309)
T d1u5ra_ 151 PGLVKLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA 227 (309)
T ss_dssp TTEEEECCCTTCBSSSS---BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred CCCEEEeecccccccCC---CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 78999999999987643 245689999999999853 46889999999999999999999999988888888887
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
....... ....+|+++.+||.+||+.||.+|||+.++|+||||+...
T Consensus 228 ~~~~~~~--~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~ 274 (309)
T d1u5ra_ 228 QNESPAL--QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (309)
T ss_dssp HSCCCCC--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred hCCCCCC--CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCC
Confidence 7654332 2356899999999999999999999999999999998643
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-59 Score=468.58 Aligned_cols=256 Identities=30% Similarity=0.527 Sum_probs=230.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+++ +|||||+++++|.+++.+|+|
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-CCCCEEEEEeeeccccccccc
Confidence 4699999999999999999999999999999999865443334567789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ..+++..++.++.||+.||+|||++|||||||||+|||++ .++.
T Consensus 84 ~ey~~gg~L~~~~~~~-----------------~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~---~~g~ 143 (337)
T d1o6la_ 84 MEYANGGELFFHLSRE-----------------RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGH 143 (337)
T ss_dssp EECCTTCBHHHHHHHH-----------------SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSC
T ss_pred eeccCCCchhhhhhcc-----------------cCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEec---CCCC
Confidence 9999999998877544 7899999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCC-CCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||+|+.... .......+||+.|+|||++.+ .++.++|||||||++|||++|++||.+.+..+++..+......
T Consensus 144 vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~ 223 (337)
T d1o6la_ 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223 (337)
T ss_dssp EEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred EEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCC
Confidence 99999999987643 444567899999999999875 4689999999999999999999999999999999999888765
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
++ ..+|+++.+||.+||++||.+|| +++++++||||+..
T Consensus 224 ~p----~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i 267 (337)
T d1o6la_ 224 FP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp CC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred CC----ccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence 54 46899999999999999999999 49999999999864
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-59 Score=454.29 Aligned_cols=257 Identities=26% Similarity=0.469 Sum_probs=213.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~ 173 (577)
++|++++.||+|+||+||+|+++.+|+.||||++...... +...+.+.+|+++++++ +|||||++++++.+ ++.+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~~ 81 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLY 81 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC-HHHHHHHHHHHHHTTSC-CCTTBCCEEEEEEC----CEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCC-HHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEeCCCCEEE
Confidence 4799999999999999999999999999999999876543 44567899999999999 59999999999865 56799
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC-----ceeccCCCCcEEee
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG-----LVHRDMKPENFLFK 248 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~-----iiHrDlKp~NILl~ 248 (577)
||||||+||+|.+++... ......+++..++.++.||+.||.|||++| ||||||||+|||++
T Consensus 82 ivmEy~~~g~L~~~i~~~-------------~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~ 148 (269)
T d2java1 82 IVMEYCEGGDLASVITKG-------------TKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 148 (269)
T ss_dssp EEEECCTTEEHHHHHHHH-------------HHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC
T ss_pred EEEecCCCCcHHHHHHhc-------------cccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcC
Confidence 999999999999987543 123467999999999999999999999976 99999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCC-CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+|+.+.... .....+||+.|+|||++.+ .++.++|||||||++|||+||+.||.+.+..++...
T Consensus 149 ---~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~ 225 (269)
T d2java1 149 ---GKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 225 (269)
T ss_dssp ---TTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ---CCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHH
Confidence 47899999999998765433 3356789999999999865 468899999999999999999999999999988888
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 373 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f 373 (577)
+..+.... .+..+|+++.+||.+||+.||.+|||+.|+|+|||+
T Consensus 226 i~~~~~~~---~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 226 IREGKFRR---IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp HHHTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred HHcCCCCC---CCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 88765432 235689999999999999999999999999999995
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-59 Score=466.20 Aligned_cols=263 Identities=29% Similarity=0.552 Sum_probs=235.8
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
++.++|++++.||+|+||+||+|+++.+|+.||||++.... .....+.+|+++|+.+ +|||||+++++|.+++.+
T Consensus 2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~ 76 (321)
T d1tkia_ 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIA-RHRNILHLHESFESMEEL 76 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEE
T ss_pred CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc----ccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEE
Confidence 45678999999999999999999999999999999997653 2345688999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|||||||+||+|.+++.. ....+++.+++.++.||+.||.|||++||+||||||+|||++. +.
T Consensus 77 ~lvmE~~~gg~L~~~i~~----------------~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~-~~ 139 (321)
T d1tkia_ 77 VMIFEFISGLDIFERINT----------------SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RR 139 (321)
T ss_dssp EEEECCCCCCBHHHHHTS----------------SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SS
T ss_pred EEEEecCCCCcHHHHHHh----------------cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC-CC
Confidence 999999999999887632 2347999999999999999999999999999999999999974 23
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~ 331 (577)
...+||+|||+++...........+||+.|+|||.+.+. ++.++|||||||++|+|++|..||.+.+..+.+..+....
T Consensus 140 ~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~ 219 (321)
T d1tkia_ 140 SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAE 219 (321)
T ss_dssp CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC
T ss_pred ceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence 568999999999987766666677899999999988654 5889999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
..++...|+.+|+++.+||.+||..||.+|||+.|+|+||||++..
T Consensus 220 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~ 265 (321)
T d1tkia_ 220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred CCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCc
Confidence 8777767778999999999999999999999999999999998643
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.8e-58 Score=459.85 Aligned_cols=254 Identities=27% Similarity=0.551 Sum_probs=227.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+++++ +|||||++++++.+++.+|+|
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-cCcChhheeeeEeeCCeeeeE
Confidence 3699999999999999999999999999999999765433334567899999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|...+.. ...+++..++.++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 83 mE~~~gg~l~~~~~~-----------------~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~---~~g~ 142 (316)
T d1fota_ 83 MDYIEGGELFSLLRK-----------------SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---KNGH 142 (316)
T ss_dssp ECCCCSCBHHHHHHH-----------------TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC---TTSC
T ss_pred eeecCCccccccccc-----------------cccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEc---CCCC
Confidence 999999999876643 37789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||+|+.... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+++..++.+...+
T Consensus 143 vkL~DFG~a~~~~~--~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~ 220 (316)
T d1fota_ 143 IKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF 220 (316)
T ss_dssp EEECCCSSCEECSS--CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCC
T ss_pred EEEecCccceEecc--ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCC
Confidence 99999999987653 33467899999999998765 6899999999999999999999999999999999999876554
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
+ +.+|+++.++|.+||..||.+|+ |++++++||||++.
T Consensus 221 p----~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i 263 (316)
T d1fota_ 221 P----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 263 (316)
T ss_dssp C----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred C----CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence 3 46899999999999999999996 99999999999874
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-58 Score=463.02 Aligned_cols=257 Identities=27% Similarity=0.420 Sum_probs=214.3
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEE
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~l 174 (577)
.++|++++.||+|+||+||+|+++.+|+.||||++.... .+.....+.+|+.+|+++ +|||||+++++|.+++.+||
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~i 81 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISI 81 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGC-CCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEE
Confidence 468999999999999999999999999999999987543 234567889999999999 59999999999999999999
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCceeccCCCCcEEeecCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiHrDlKp~NILl~~~~~~ 253 (577)
|||||+||+|.+++.+. ..+++..++.++.||+.||.|||+ +||+||||||+|||++ .+
T Consensus 82 VmEy~~gg~L~~~l~~~-----------------~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~---~~ 141 (322)
T d1s9ja_ 82 CMEHMDGGSLDQVLKKA-----------------GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SR 141 (322)
T ss_dssp EEECCTTEEHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TT
T ss_pred EEEcCCCCcHHHHHhhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeEC---CC
Confidence 99999999999887543 679999999999999999999997 5999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH------
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE------ 326 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~------ 326 (577)
+.+||+|||+|+..... ...+.+||+.|+|||++.+ .++.++||||+||++|||++|+.||.+.+.......
T Consensus 142 ~~vkl~DFGla~~~~~~-~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~ 220 (322)
T d1s9ja_ 142 GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 220 (322)
T ss_dssp CCEEECCCCCCHHHHHH-TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----
T ss_pred CCEEEeeCCCccccCCC-ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhc
Confidence 89999999999865432 2346799999999999876 579999999999999999999999977654322110
Q ss_pred ------------------------------------HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 ------------------------------------VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 ------------------------------------i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+....+ +..+...+|+++.+||.+||+.||.+|||++|+|+|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 221 GDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp -------------------------CCCCHHHHHHHHHTSCC--CCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCcccCCcccccccccccccccccccchhHHHHHhhhhccCC--ccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 001000 011112367899999999999999999999999999
Q ss_pred ccccccC
Q 008127 371 PWVREGG 377 (577)
Q Consensus 371 p~f~~~~ 377 (577)
|||+...
T Consensus 299 pf~~~~~ 305 (322)
T d1s9ja_ 299 AFIKRSD 305 (322)
T ss_dssp HHHHHHH
T ss_pred HhhCcCC
Confidence 9998643
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.5e-57 Score=461.70 Aligned_cols=254 Identities=28% Similarity=0.505 Sum_probs=228.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|+++.+|+.||||++.+.........+.+.+|+.+|+.+ +|||||++++++.+.+.+|+|
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-CCCcEeecccccccccccccc
Confidence 4799999999999999999999999999999999765433334567789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+.||+|.+.+... ..+++..++.++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 120 ~e~~~~g~l~~~l~~~-----------------~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~---~~g~ 179 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRRI-----------------GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGY 179 (350)
T ss_dssp EECCTTCBHHHHHHHH-----------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSC
T ss_pred cccccccchhhhHhhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccC---CCCC
Confidence 9999999999877544 6799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 256 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
+||+|||+|+.+.. .....+||+.|||||++.+. ++.++|||||||++|+|+||+.||.+.+...++..+....+.+
T Consensus 180 ikL~DFG~a~~~~~--~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~ 257 (350)
T d1rdqe_ 180 IQVTDFGFAKRVKG--RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257 (350)
T ss_dssp EEECCCTTCEECSS--CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred EEeeeceeeeeccc--ccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCC
Confidence 99999999987753 33467899999999998765 5889999999999999999999999999999999998876554
Q ss_pred CCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 335 RRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 335 ~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
+ +.+|+++.+||.+||..||.+|+ |++++++||||+..
T Consensus 258 p----~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~ 300 (350)
T d1rdqe_ 258 P----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp C----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred C----ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence 3 56899999999999999999995 99999999999864
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-58 Score=463.91 Aligned_cols=266 Identities=29% Similarity=0.564 Sum_probs=222.0
Q ss_pred ccceeeee-eecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc----C
Q 008127 95 DRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----D 169 (577)
Q Consensus 95 ~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~----~ 169 (577)
-++|.+.. .||+|+||+||+|+++.+|+.||||++... ..+.+|+.++.++.+|||||+++++|.+ +
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~ 81 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 81 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCC
Confidence 45798875 699999999999999999999999998643 3467899998777679999999999875 4
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
..+|||||||+||+|.+++... ....+++.+++.++.||+.||.|||++||+||||||+|||++.
T Consensus 82 ~~~~ivmEy~~gg~L~~~i~~~---------------~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~ 146 (335)
T d2ozaa1 82 KCLLIVMECLDGGELFSRIQDR---------------GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS 146 (335)
T ss_dssp EEEEEEEECCCSEEHHHHHHSC---------------SCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESC
T ss_pred CEEEEEEECCCCCcHHHHHHhc---------------CCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccc
Confidence 6799999999999999977432 2357999999999999999999999999999999999999986
Q ss_pred CCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
.+..+.+||+|||+|+...........+||+.|+|||++.+. ++.++|||||||++|+|+||++||.+.+.......+.
T Consensus 147 ~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~ 226 (335)
T d2ozaa1 147 KRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 226 (335)
T ss_dssp SSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-------
T ss_pred ccccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHH
Confidence 556788999999999987766666778999999999998764 6899999999999999999999998776555444433
Q ss_pred ----hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCCCCCCc
Q 008127 329 ----RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 383 (577)
Q Consensus 329 ----~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~~~~ 383 (577)
.....++...++.+|+++.+||.+||+.||.+|||+.++|+||||++.......+
T Consensus 227 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~~~ 285 (335)
T d2ozaa1 227 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 285 (335)
T ss_dssp -CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSSCCCE
T ss_pred HHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCCCCCC
Confidence 3333444444557899999999999999999999999999999998765544433
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-57 Score=454.60 Aligned_cols=257 Identities=28% Similarity=0.502 Sum_probs=226.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.++.+..+|||||++++++.+++.+|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 46999999999999999999999999999999997654333344567778888776533699999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++... ..+++.+++.++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 82 mEy~~~g~L~~~i~~~-----------------~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~---~~~~ 141 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSC-----------------HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGH 141 (320)
T ss_dssp EECCTTCBHHHHHHHH-----------------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSC
T ss_pred EeecCCCcHHHHhhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeec---CCCc
Confidence 9999999999987544 6789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
+||+|||+|+..... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+++..+..+.+.
T Consensus 142 ~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~ 221 (320)
T d1xjda_ 142 IKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF 221 (320)
T ss_dssp EEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred eeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Confidence 999999999866533 33455789999999999876 4588999999999999999999999999999999999887665
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHH-HHhcCcccccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAA-QALSHPWVREG 376 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~-~il~hp~f~~~ 376 (577)
++ +.+|+++.+||.+||++||.+|||+. ++++||||++.
T Consensus 222 ~p----~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 222 YP----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp CC----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred CC----ccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence 44 45899999999999999999999996 89999999864
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.2e-56 Score=457.63 Aligned_cols=258 Identities=23% Similarity=0.368 Sum_probs=215.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHH---HHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE---VKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E---~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
++|++++.||+|+||.||+|+++.+|+.||||++.+...........+.+| +.+++.+ +|||||+++++|.+++.+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~-~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcC-CCCcEEEEEEEEEECCEE
Confidence 369999999999999999999999999999999976543222233444555 4555555 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|||||||+||+|.+++... ..+++..++.++.||+.||.|||++|||||||||+|||++ .
T Consensus 83 ~ivmE~~~gg~L~~~l~~~-----------------~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~---~ 142 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQH-----------------GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---E 142 (364)
T ss_dssp EEEECCCCSCBHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---S
T ss_pred EEEEEecCCCcHHHHHHhc-----------------ccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEc---C
Confidence 9999999999999887544 6789999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCCccccccCCccccchhcc-c-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008127 253 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-R-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 330 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 330 (577)
++.+||+|||+|+..... .....+||+.|+|||++. + .++.++|||||||++|+|+||+.||.+........ +...
T Consensus 143 ~g~iKl~DFGla~~~~~~-~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~~~~ 220 (364)
T d1omwa3 143 HGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRM 220 (364)
T ss_dssp SSCEEECCCTTCEECSSS-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH-HHHH
T ss_pred CCcEEEeeeceeeecCCC-cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHh
Confidence 789999999999876543 345668999999999885 3 36889999999999999999999998765543332 2222
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC-----HHHHhcCcccccc
Q 008127 331 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 376 (577)
Q Consensus 331 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt-----~~~il~hp~f~~~ 376 (577)
........++.+|+++.+||.+||.+||.+||| |+++++||||+..
T Consensus 221 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i 271 (364)
T d1omwa3 221 TLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271 (364)
T ss_dssp SSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred cccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence 222233344679999999999999999999999 7999999999874
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-56 Score=436.07 Aligned_cols=253 Identities=29% Similarity=0.541 Sum_probs=213.2
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch---hhHHHHHHHHHHHHHhc-CCCCeeEEEEEEEcC
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA-GHENVVKFYNAFEDD 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~---~~~~~~~~E~~~l~~l~-~hpniv~~~~~~~~~ 169 (577)
+.++|++++.||+|+||.||+|+++.+|+.||||++.+...... .....+.+|+.+|+++. .|||||++++++.++
T Consensus 2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~ 81 (273)
T d1xwsa_ 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 81 (273)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence 45689999999999999999999999999999999976543211 11234678999999995 389999999999999
Q ss_pred CeEEEEEeccCC-CchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 NYVYIAMELCEG-GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 ~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
+.+|+||||+.+ +++.+.+... ..+++..++.++.||+.||.|||++|||||||||+|||++
T Consensus 82 ~~~~lv~e~~~~~~~l~~~~~~~-----------------~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~ 144 (273)
T d1xwsa_ 82 DSFVLILERPEPVQDLFDFITER-----------------GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 144 (273)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred CeEEEEEEeccCcchHHHHHhcc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEe
Confidence 999999999976 5666655433 6799999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-C-CCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
. +++.+||+|||+|+.... ......+||+.|+|||++.+. + +.++|||||||++|+|++|+.||.+. ..
T Consensus 145 ~--~~~~vkl~DFG~a~~~~~-~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~ 215 (273)
T d1xwsa_ 145 L--NRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EE 215 (273)
T ss_dssp T--TTTEEEECCCTTCEECCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HH
T ss_pred c--CCCeEEECccccceeccc-ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc------hH
Confidence 4 357899999999986543 344567899999999998754 3 56789999999999999999999653 23
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
+......++ +.+|+++.+||.+||..||++|||++|+|+||||++.
T Consensus 216 i~~~~~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 261 (273)
T d1xwsa_ 216 IIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261 (273)
T ss_dssp HHHCCCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred HhhcccCCC----CCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 455544333 4689999999999999999999999999999999864
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-56 Score=443.70 Aligned_cols=258 Identities=26% Similarity=0.364 Sum_probs=211.9
Q ss_pred eeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCch--hhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEe
Q 008127 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP--IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 177 (577)
Q Consensus 100 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~--~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e 177 (577)
.+++||+|+||+||+|+++.+|+.||||++........ .....+.+|+.+|+++ +|||||++++++..++.+|||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~~~~~~~ivmE 80 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFD 80 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEE
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeeccCCceeehhh
Confidence 46789999999999999999999999999876533211 1234688999999999 59999999999999999999999
Q ss_pred ccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCee
Q 008127 178 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 257 (577)
Q Consensus 178 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vk 257 (577)
||.++++... ......+++..++.++.||+.||+|||++||+||||||+|||++ .++.+|
T Consensus 81 ~~~~~~~~~~-----------------~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~---~~~~~K 140 (299)
T d1ua2a_ 81 FMETDLEVII-----------------KDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLK 140 (299)
T ss_dssp CCSEEHHHHH-----------------TTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEE
T ss_pred hhcchHHhhh-----------------hhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEec---CCCccc
Confidence 9988765432 22457799999999999999999999999999999999999998 478999
Q ss_pred EEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008127 258 ATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 334 (577)
Q Consensus 258 l~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~ 334 (577)
|+|||+|+..... ......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+.......
T Consensus 141 L~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~ 220 (299)
T d1ua2a_ 141 LADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTP 220 (299)
T ss_dssp ECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred cccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCC
Confidence 9999999876543 33456789999999998753 35889999999999999999999999999888887776421111
Q ss_pred CCC------------------------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 335 RRK------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 335 ~~~------------------------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
... .++.+++++.+||.+||+.||++|||++|+|+||||++...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~ 288 (299)
T d1ua2a_ 221 TEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG 288 (299)
T ss_dssp CTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred ChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCC
Confidence 000 02357889999999999999999999999999999997643
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-55 Score=436.10 Aligned_cols=262 Identities=26% Similarity=0.437 Sum_probs=215.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+++.+|+.||||++..... .....+.+.+|+++|+++ +|||||+++++|.+++.+|+|
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~Hp~Iv~~~~~~~~~~~~~iv 79 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLV 79 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhC-CCCcEEEeccccccccceeEE
Confidence 479999999999999999999999999999999965432 223456789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||.+ ++.+.+.. .....+++..++.++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 80 ~e~~~~-~~~~~~~~---------------~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~---~~~~ 140 (298)
T d1gz8a_ 80 FEFLHQ-DLKKFMDA---------------SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGA 140 (298)
T ss_dssp EECCSE-EHHHHHHH---------------TTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSC
T ss_pred EeecCC-chhhhhhh---------------hcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeec---ccCc
Confidence 999965 44444322 2356799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||+|+..... ......+||+.|+|||++... ++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 141 ~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~ 220 (298)
T d1gz8a_ 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220 (298)
T ss_dssp EEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred ceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcC
Confidence 999999999876533 334566899999999986543 47889999999999999999999998887777766654211
Q ss_pred CCCCC-------------------------CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 333 DFRRK-------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 333 ~~~~~-------------------------~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
..... .++.+|+++.+||.+||+.||.+|||+.|+|+||||++...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~ 291 (298)
T d1gz8a_ 221 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291 (298)
T ss_dssp CCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred CCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence 11110 02357889999999999999999999999999999987643
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.8e-55 Score=431.46 Aligned_cols=261 Identities=28% Similarity=0.434 Sum_probs=220.5
Q ss_pred ccccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC--
Q 008127 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN-- 170 (577)
Q Consensus 93 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~-- 170 (577)
.+.++|++.+.||+|+||.||+|+++.+|+.||||++.+.....+.....+.+|+.+++.+ +|||||++++++...+
T Consensus 4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-~hpniv~~~~~~~~~~~~ 82 (277)
T d1o6ya_ 4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPA 82 (277)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEECSS
T ss_pred CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-CCCCCCcccceeeeccCC
Confidence 3567899999999999999999999999999999999876655566677899999999999 5999999999987543
Q ss_pred --eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 171 --YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+|||||||+||+|.+.+... ..+++.+++.++.||+.||.|||++|||||||||+|||++
T Consensus 83 ~~~~~lvmE~~~g~~L~~~~~~~-----------------~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~ 145 (277)
T d1o6ya_ 83 GPLPYIVMEYVDGVTLRDIVHTE-----------------GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 145 (277)
T ss_dssp SEEEEEEEECCCEEEHHHHHHHH-----------------CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE
T ss_pred CceEEEEEECCCCCEehhhhccc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccC
Confidence 489999999999998876543 6799999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCC----CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~ 323 (577)
.++.++|+|||.+....... .....+||+.|+|||++.+. ++.++|||||||++|+|+||++||.+.+..+.
T Consensus 146 ---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~ 222 (277)
T d1o6ya_ 146 ---ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 222 (277)
T ss_dssp ---TTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ---ccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH
Confidence 47889999999987553322 33456899999999998765 68899999999999999999999999999899
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 374 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~ 374 (577)
+..++...+..+...++.+|+++.+||.+||++||.+||+..+.|.|+|.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r 273 (277)
T d1o6ya_ 223 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273 (277)
T ss_dssp HHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence 888888877766666788999999999999999999999555555677764
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-55 Score=436.12 Aligned_cols=264 Identities=26% Similarity=0.357 Sum_probs=216.6
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCC-CCEEEEEEecccccCchhhHHHHHHHHHHHHHhc--CCCCeeEEEEEEEc---
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKAN-GDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFED--- 168 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~-~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~--- 168 (577)
.++|++++.||+|+||+||+|++..+ ++.||||++...... ......+.+|+.+|+.|. +||||++++++|..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhcc-chHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 46899999999999999999999766 567999998654322 112234667888887774 69999999999853
Q ss_pred --CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEE
Q 008127 169 --DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 246 (577)
Q Consensus 169 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NIL 246 (577)
...+|++||||.++.+.... ......+++..++.++.||+.||+|||++|||||||||+|||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NIL 148 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLD----------------KVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL 148 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHH----------------HSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred ccCceEEEEEEeccCCchhhhh----------------hccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEE
Confidence 35789999999887654322 124567999999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 247 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 247 l~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
++ .++.+||+|||++............+||+.|+|||++.+ .++.++|||||||++|||++|++||.+.+..+.+.
T Consensus 149 i~---~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~ 225 (305)
T d1blxa_ 149 VT---SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 225 (305)
T ss_dssp EC---TTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred Ec---CCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 98 478999999999987765556667899999999998765 56899999999999999999999999998888877
Q ss_pred HHHhCCCCC-----------------------CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 326 EVLRNKPDF-----------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 326 ~i~~~~~~~-----------------------~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
.++...... ....++.+++.+.+||.+||++||++|||+.|+|+||||++...
T Consensus 226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~ 301 (305)
T d1blxa_ 226 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 301 (305)
T ss_dssp HHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred HHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchh
Confidence 765421100 00123457899999999999999999999999999999998653
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.1e-54 Score=423.35 Aligned_cols=252 Identities=21% Similarity=0.294 Sum_probs=212.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++.+.||+|+||+||+|+++.+|+.||||++..... ..+.+.+|+++|+++ +|||||+++++|.+++.+|||
T Consensus 17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~----~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~iv 91 (287)
T d1opja_ 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYII 91 (287)
T ss_dssp GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc----hHHHHHHHHHHHHhC-CCCCEecCCccEeeCCeeEEE
Confidence 579999999999999999999999999999999876542 456799999999999 499999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||++|+|.+++... ....+++..++.++.||+.||.|||++|||||||||+||||+ .++.
T Consensus 92 ~E~~~~g~l~~~l~~~---------------~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~---~~~~ 153 (287)
T d1opja_ 92 TEFMTYGNLLDYLREC---------------NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHL 153 (287)
T ss_dssp EECCTTCBHHHHHHHS---------------CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGC
T ss_pred eecccCcchHHHhhhc---------------cccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEEC---CCCc
Confidence 9999999999877543 346789999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCC-ChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~-~~~~~~~~i~~~~ 331 (577)
+||+|||+|+....... .....||+.|+|||++. +.++.++|||||||++|||++|..||... +...++..+.. .
T Consensus 154 ~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~-~ 232 (287)
T d1opja_ 154 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 232 (287)
T ss_dssp EEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-T
T ss_pred EEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhc-C
Confidence 99999999987654332 23456899999999876 45688999999999999999976666544 44444444433 3
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.. ...++.+|+++.+||.+||+.||++|||+.++++ +|+.
T Consensus 233 ~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~--~L~~ 272 (287)
T d1opja_ 233 YR--MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ--AFET 272 (287)
T ss_dssp CC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH--HHHH
T ss_pred CC--CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH--HHHH
Confidence 22 2233568999999999999999999999999976 4443
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-54 Score=421.45 Aligned_cols=250 Identities=24% Similarity=0.390 Sum_probs=204.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+.. ..||||++..... .+...+.+.+|+.+|+++ +|||||++++++.. +.+|||
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~~~~~~~~-~~~~lv 81 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKT-RHVNILLFMGYSTA-PQLAIV 81 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSC-CTTHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-SSCEEE
T ss_pred ccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCEeeeeEEEec-cEEEEE
Confidence 57999999999999999999743 3699999876543 244678899999999999 59999999998754 568999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||+||+|.+++.. ....+++..+..++.||+.||+|||+++||||||||+|||++ .++.
T Consensus 82 ~Ey~~~g~L~~~l~~----------------~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~---~~~~ 142 (276)
T d1uwha_ 82 TQWCEGSSLYHHLHI----------------IETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLT 142 (276)
T ss_dssp EECCCEEEHHHHHHT----------------SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTSS
T ss_pred EecCCCCCHHHHHhh----------------ccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEc---CCCC
Confidence 999999999987742 236799999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC---CCccccccCCccccchhccc----CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 256 LKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 256 vkl~DFGla~~~~~~---~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
+||+|||+|+..... ......+||+.|||||++.+ .++.++|||||||++|||+||+.||.+.+.......++
T Consensus 143 ~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~ 222 (276)
T d1uwha_ 143 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222 (276)
T ss_dssp EEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH
T ss_pred EEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHH
Confidence 999999999876432 23346789999999999853 35788999999999999999999998877665555544
Q ss_pred hCCCCCC--CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 329 RNKPDFR--RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 329 ~~~~~~~--~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
......+ ....+.+|+++.+||.+||..||.+|||+.+++++
T Consensus 223 ~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp HHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 4332211 22345789999999999999999999999999875
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.6e-53 Score=430.63 Aligned_cols=253 Identities=26% Similarity=0.506 Sum_probs=212.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc--CCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--~~~~~ 173 (577)
++|+++++||+|+||+||+|+++.+|+.||||++... ..+.+.+|+.+|+.+.+||||++++++|.. ...++
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~ 108 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 108 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCcee
Confidence 5799999999999999999999999999999998654 245688999999999779999999999984 45799
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|||||.+++|... ...+++..++.++.||+.||.|||++|||||||||+|||++. ++
T Consensus 109 ~v~e~~~~~~L~~~--------------------~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~--~~ 166 (328)
T d3bqca1 109 LVFEHVNNTDFKQL--------------------YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EH 166 (328)
T ss_dssp EEEECCCSCBGGGT--------------------TTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TT
T ss_pred EEEeecCCCcHHHH--------------------hcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC--CC
Confidence 99999999998652 256999999999999999999999999999999999999984 34
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChh-HHHHHHHh-
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLR- 329 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~-~~~~~i~~- 329 (577)
..+||+|||+|+...........+||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+..
T Consensus 167 ~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~ 246 (328)
T d3bqca1 167 RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 246 (328)
T ss_dssp TEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHH
T ss_pred CeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHH
Confidence 5799999999998877767778899999999998765 3588999999999999999999999765432 22211110
Q ss_pred ------------CCCC--------------------CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCcccccc
Q 008127 330 ------------NKPD--------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 376 (577)
Q Consensus 330 ------------~~~~--------------------~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~ 376 (577)
.... .....+..+++++.+||.+||++||.+|||++|+|+||||+..
T Consensus 247 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v 325 (328)
T d3bqca1 247 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325 (328)
T ss_dssp HCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred HCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 0000 0111223478999999999999999999999999999999874
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=8.8e-54 Score=423.92 Aligned_cols=257 Identities=28% Similarity=0.424 Sum_probs=211.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|+++++||+|+||+||+|+++ +|+.||||++..... .....+.+.+|+.+|+++ +|||||+++++|..++..|++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~i~ 78 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-DEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLV 78 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEE
T ss_pred CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhC-CCCcEEeeeeecccCCceeEE
Confidence 48999999999999999999985 789999999976543 223457789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
|||+.++.+.... .....+++..++.++.||+.||+|||++|||||||||+|||++ .++.
T Consensus 79 ~e~~~~~~~~~~~-----------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~---~~~~ 138 (286)
T d1ob3a_ 79 FEHLDQDLKKLLD-----------------VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN---REGE 138 (286)
T ss_dssp EECCSEEHHHHHH-----------------TSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSC
T ss_pred EEeehhhhHHHHH-----------------hhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEc---CCCC
Confidence 9999776554322 2457899999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCC-CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008127 256 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 256 vkl~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
+||+|||+|...... .......||+.|+|||.+.+ .++.++|||||||++|||++|+.||.+.+..+.+.++.....
T Consensus 139 ~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~ 218 (286)
T d1ob3a_ 139 LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILG 218 (286)
T ss_dssp EEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred EEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhC
Confidence 999999999876433 23345679999999998864 348899999999999999999999999888777776643111
Q ss_pred CCCC-------------------------CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 333 DFRR-------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 333 ~~~~-------------------------~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
.... ...+.+++.+.+||.+||++||++|||+.|+|+||||++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 219 TPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (286)
T ss_dssp CCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred CCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence 1100 112457889999999999999999999999999999985
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-53 Score=430.36 Aligned_cols=258 Identities=28% Similarity=0.426 Sum_probs=213.9
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc------CC
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------DN 170 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------~~ 170 (577)
+|+.+++||+|+||+||+|+++.+|+.||||++...... ..+|+.+|++| +||||++++++|.. ..
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-------~~~Ei~il~~l-~h~niv~~~~~~~~~~~~~~~~ 92 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEV 92 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS-------CCHHHHHHHHC-CCTTBCCEEEEEEEC--CCSCC
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH-------HHHHHHHHHhc-CCCCCCcEEEEEEecCccCCce
Confidence 699999999999999999999999999999999765421 24799999999 59999999999853 34
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
++|||||||+++ +.+.+.. .......+++..++.++.||+.||+|||++|||||||||+|||++.
T Consensus 93 ~~~lv~Ey~~~~-~~~~l~~-------------~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~- 157 (350)
T d1q5ka_ 93 YLNLVLDYVPET-VYRVARH-------------YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP- 157 (350)
T ss_dssp EEEEEEECCSEE-HHHHHHH-------------HHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT-
T ss_pred EEEEEEeccCCc-cHHHHHh-------------hhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEec-
Confidence 689999999765 4443322 1224578999999999999999999999999999999999999984
Q ss_pred CCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i~ 328 (577)
++..+||+|||+|............+||+.|+|||++.+ .++.++|||||||++|||++|++||.+.+..+.+..+.
T Consensus 158 -~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~ 236 (350)
T d1q5ka_ 158 -DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236 (350)
T ss_dssp -TTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHH
T ss_pred -CCCceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHH
Confidence 345899999999988776666677899999999997653 46899999999999999999999999888777766654
Q ss_pred hCC-----------------CCCC--------CCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 329 RNK-----------------PDFR--------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 329 ~~~-----------------~~~~--------~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
... ..++ ....+.+++++.+||.+||.+||++|||+.|+|+||||++...
T Consensus 237 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 237 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp HHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred HHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence 310 0111 0113457899999999999999999999999999999997643
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-53 Score=428.96 Aligned_cols=268 Identities=24% Similarity=0.297 Sum_probs=214.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC-----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD-----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++++.||+|+||+||+|+++.+++ .||+|.+..... ......+.+|+.+|.++.+|||||++++++.+.+
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~ 114 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGACTLSG 114 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC--HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence 579999999999999999999876554 699998865432 2345678999999999967999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhh------hhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCc
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLT------SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 244 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~N 244 (577)
.+|||||||++|+|.++|.......... ............+++..++.++.||+.||.|||+++||||||||+|
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~N 194 (325)
T d1rjba_ 115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN 194 (325)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhc
Confidence 9999999999999999886432110000 0000011123568999999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCC
Q 008127 245 FLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKT 319 (577)
Q Consensus 245 ILl~~~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~ 319 (577)
||++ .++.+||+|||+|+....... .....||+.|||||++. +.++.++|||||||++|||+| |++||.+.+
T Consensus 195 ill~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~ 271 (325)
T d1rjba_ 195 VLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 271 (325)
T ss_dssp EEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred cccc---cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence 9998 478999999999987654332 23567899999999876 556889999999999999998 899999887
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 320 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 320 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..+.+.+++.....++ .+..+|+++.+||.+||+.||++|||+++|++|
T Consensus 272 ~~~~~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 272 VDANFYKLIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp CSHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCC--CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 7777777777654433 235689999999999999999999999999875
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-53 Score=417.31 Aligned_cols=252 Identities=22% Similarity=0.327 Sum_probs=211.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|+++ +++.||||++..... ..+.+.+|+.+++++ +|||||++++++.+ +.+|+|
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~-~~~~iv 85 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQL-QHQRLVRLYAVVTQ-EPIYII 85 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEE
T ss_pred HHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcC----CHHHHHHHHHHHHhC-CCCCEeEEEeeecc-CCeEEE
Confidence 57999999999999999999975 678899999976542 356799999999999 59999999998765 557999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||++|+|.+++... ....+++..++.++.||+.||.|||+++|+||||||+||||+ .++.
T Consensus 86 ~Ey~~~g~L~~~~~~~---------------~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~---~~~~ 147 (272)
T d1qpca_ 86 TEYMENGSLVDFLKTP---------------SGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLS 147 (272)
T ss_dssp EECCTTCBHHHHTTSH---------------HHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSC
T ss_pred EEeCCCCcHHHHHhhc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeee---cccc
Confidence 9999999998865322 224589999999999999999999999999999999999998 5789
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhC-CCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG-RRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg-~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||+|+....... .....||+.|+|||++.+ .++.++|||||||++|||+|| .+||...+..+++..+..+.
T Consensus 148 ~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~ 227 (272)
T d1qpca_ 148 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 227 (272)
T ss_dssp EEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC
T ss_pred eeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC
Confidence 99999999987754432 235679999999998874 568899999999999999995 55566667777777776653
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc--Cccccc
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVRE 375 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~--hp~f~~ 375 (577)
.. ...+.+|+++.+||.+||+.||++|||+.++++ |+||..
T Consensus 228 ~~---~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts 270 (272)
T d1qpca_ 228 RM---VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (272)
T ss_dssp CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC---CCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence 22 223568999999999999999999999999998 888864
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-53 Score=413.59 Aligned_cols=247 Identities=21% Similarity=0.365 Sum_probs=202.3
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||.||+|+++ +++.||||++..... ..+.+.+|+.+++++ +|||||+++++|..++.+|+|
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~lv 78 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLV 78 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcC----cHHHHHHHHHHHHhc-CCCCcccccceeccCCceEEE
Confidence 46999999999999999999975 577899999976542 346799999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||++|+|.+++.. ....+++..++.++.||+.||.|||+++|+||||||+|||++ .++.
T Consensus 79 ~E~~~~g~L~~~l~~----------------~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~---~~~~ 139 (263)
T d1sm2a_ 79 FEFMEHGCLSDYLRT----------------QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQV 139 (263)
T ss_dssp EECCTTCBHHHHHHT----------------TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEEC---GGGC
T ss_pred EEecCCCcHHHHhhc----------------cccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeec---CCCC
Confidence 999999999987643 236689999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||+|+....... .....||+.|+|||++.+ .++.++|||||||++|||+| |.+||...+..+++..+..+.
T Consensus 140 ~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~ 219 (263)
T d1sm2a_ 140 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 219 (263)
T ss_dssp EEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTC
T ss_pred eEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcC
Confidence 99999999987654332 234679999999999875 56889999999999999999 577777777777888777754
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
... .+..+++++.+||.+||+.||++|||++++++|
T Consensus 220 ~~~---~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 220 RLY---KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp CCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCC---CccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 322 224578999999999999999999999999875
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.4e-53 Score=420.21 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=202.6
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCC---EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
.+|++.+.||+|+||+||+|+++.+|+ .||||.+.... .....+.+.+|+.+|++| +|||||++++++..++.+
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~ 102 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQF-DHPNVIHLEGVVTKSTPV 102 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSC
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEE
Confidence 479999999999999999999887765 58899876543 244567899999999999 599999999999999999
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||||++|+|.+++.. ....+++.+++.++.||+.||.|||+++||||||||+||||+ .
T Consensus 103 ~iv~Ey~~~g~L~~~~~~----------------~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~---~ 163 (299)
T d1jpaa_ 103 MIITEFMENGSLDSFLRQ----------------NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVN---S 163 (299)
T ss_dssp EEEEECCTTEEHHHHHHT----------------TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---T
T ss_pred EEEEEecCCCcceeeecc----------------ccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEEC---C
Confidence 999999999999886642 235799999999999999999999999999999999999998 4
Q ss_pred CCCeeEEecCCCcccCCCCCc------cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKKF------QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~~------~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
++.+||+|||+|+.+...... ....||+.|+|||++.+ .++.++|||||||++|||+| |+.||.+.+..++.
T Consensus 164 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~ 243 (299)
T d1jpaa_ 164 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 243 (299)
T ss_dssp TCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred CCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHH
Confidence 789999999999876543221 23468999999998864 56889999999999999998 89999999988888
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..+..+.. .+.+..+++++.+||.+||+.||.+|||+.+++++
T Consensus 244 ~~i~~~~~---~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 244 NAIEQDYR---LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp HHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHcCCC---CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 88776532 22335689999999999999999999999998764
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-53 Score=416.19 Aligned_cols=254 Identities=20% Similarity=0.291 Sum_probs=213.0
Q ss_pred cceeeeee-ecccCCeEEEEEEEcC--CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKL-LGHGQFGYTYVATDKA--NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~-lG~G~fg~V~~~~~~~--~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
++|.+.+. ||+|+||+||+|.++. ++..||||++.... .....+.+.+|+++|+++ +|||||++++++..+ .+
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~-~~ 83 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQAE-AL 83 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEESS-SE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc--CHHHHHHHHHHHHHHHhC-CCCCEeeEeeeeccC-eE
Confidence 36788874 9999999999998764 44579999987543 244567899999999999 599999999999764 58
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|||||||++|+|.+++.. ....+++..++.++.||+.||.|||++|||||||||+|||++.
T Consensus 84 ~lvmE~~~~g~L~~~l~~----------------~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~--- 144 (285)
T d1u59a_ 84 MLVMEMAGGGPLHKFLVG----------------KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN--- 144 (285)
T ss_dssp EEEEECCTTEEHHHHHTT----------------CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE---
T ss_pred EEEEEeCCCCcHHHHhhc----------------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeecc---
Confidence 999999999999886532 2467999999999999999999999999999999999999984
Q ss_pred CCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
++.+||+|||+|+.+..... ....+||+.|+|||++.+ .++.++|||||||++|||+| |+.||.+.+..++...
T Consensus 145 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~ 224 (285)
T d1u59a_ 145 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 224 (285)
T ss_dssp TTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH
T ss_pred CCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 78999999999987654332 234578999999998864 56889999999999999998 9999999888888887
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHH---hcCccccc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA---LSHPWVRE 375 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~i---l~hp~f~~ 375 (577)
+..+... ..++.+|+++.+||.+||..||++|||+.++ |+|+|+.-
T Consensus 225 i~~~~~~---~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~ 273 (285)
T d1u59a_ 225 IEQGKRM---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 273 (285)
T ss_dssp HHTTCCC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHcCCCC---CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 7765432 2236789999999999999999999999888 66888753
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-52 Score=426.83 Aligned_cols=258 Identities=29% Similarity=0.488 Sum_probs=210.5
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 170 (577)
+.++|+++++||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|+++ +|||||+++++|...+
T Consensus 16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpniv~l~~~~~~~~~~~ 93 (346)
T d1cm8a_ 16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLD 93 (346)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTT
T ss_pred cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhc-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEeccCcccc
Confidence 56799999999999999999999999999999999976433 345567889999999999 5999999999998654
Q ss_pred ---eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 171 ---YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 171 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
.+|+||||| +++|...+ . ...+++..++.++.||+.||.|||++|||||||||+|||+
T Consensus 94 ~~~~~~lv~e~~-~~~l~~~~-~-----------------~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~ 154 (346)
T d1cm8a_ 94 DFTDFYLVMPFM-GTDLGKLM-K-----------------HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV 154 (346)
T ss_dssp TCCCCEEEEECC-SEEHHHHH-H-----------------HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred ccceEEEEEecc-cccHHHHH-H-----------------hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc
Confidence 579999999 55555433 1 2679999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 325 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~ 325 (577)
+ .++.+||+|||+|+.... .....+||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+....+.
T Consensus 155 ~---~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~ 229 (346)
T d1cm8a_ 155 N---EDCELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK 229 (346)
T ss_dssp C---TTCCEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred c---cccccccccccceeccCC--ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHH
Confidence 8 588999999999987643 3456789999999998764 34889999999999999999999998887766555
Q ss_pred HHHhC-----------------------CCCCCCC----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 326 EVLRN-----------------------KPDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 326 ~i~~~-----------------------~~~~~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
.+... .+..... ..+.+++++.+||.+||+.||.+|||+.|+|+||||+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 230 EIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp HHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 44321 1111111 2356789999999999999999999999999999999754
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-53 Score=422.94 Aligned_cols=259 Identities=27% Similarity=0.419 Sum_probs=210.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-------
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------- 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------- 168 (577)
++|+++++||+|+||+||+|+++.+|+.||||++...... ......+.+|+.+|+++ +||||+++++++..
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l-~h~nii~~~~~~~~~~~~~~~ 87 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNR 87 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT-TSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEC-------
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHHh-cCCCccceEeeeecccccccc
Confidence 5899999999999999999999999999999998765432 33456788999999999 59999999998854
Q ss_pred -CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEe
Q 008127 169 -DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 247 (577)
Q Consensus 169 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl 247 (577)
++.+|+|||||.++.+... ......+++..++.++.||+.||.|||++|||||||||+|||+
T Consensus 88 ~~~~~~iv~e~~~~~~~~~~-----------------~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl 150 (318)
T d3blha1 88 CKGSIYLVFDFCEHDLAGLL-----------------SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 150 (318)
T ss_dssp ---CEEEEEECCCEEHHHHH-----------------TCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred cCceEEEEEeccCCCccchh-----------------hhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheee
Confidence 4568999999987655321 2234679999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEEecCCCcccCCC-----CCccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCCh
Q 008127 248 KSAKEDSSLKATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE 320 (577)
Q Consensus 248 ~~~~~~~~vkl~DFGla~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 320 (577)
+ .++.+||+|||+|...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.
T Consensus 151 ~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~ 227 (318)
T d3blha1 151 T---RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 227 (318)
T ss_dssp C---TTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred c---CCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCH
Confidence 8 4789999999999765432 22345689999999998764 468999999999999999999999998888
Q ss_pred hHHHHHHHhCCCCCCCCCCCC----------------------------CCHHHHHHHHHccccCcCCCCCHHHHhcCcc
Q 008127 321 DGIFKEVLRNKPDFRRKPWPS----------------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPW 372 (577)
Q Consensus 321 ~~~~~~i~~~~~~~~~~~~~~----------------------------~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~ 372 (577)
......+......+....+.. .++++.+||.+||++||++|||+.|+|+|||
T Consensus 228 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpf 307 (318)
T d3blha1 228 QHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307 (318)
T ss_dssp HHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred HHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChh
Confidence 777666544322222211111 3667889999999999999999999999999
Q ss_pred cccc
Q 008127 373 VREG 376 (577)
Q Consensus 373 f~~~ 376 (577)
|+..
T Consensus 308 f~~~ 311 (318)
T d3blha1 308 FWSD 311 (318)
T ss_dssp GSSS
T ss_pred hccC
Confidence 9964
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-53 Score=408.60 Aligned_cols=247 Identities=22% Similarity=0.333 Sum_probs=215.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|+++++||+|+||+||+|+++ +++.||||++.+... ..+.+.+|+.+++++ +||||++++++|.+++.+++|
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~----~~~~~~~Ev~~~~~l-~HpnIv~~~g~~~~~~~~~iv 77 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFII 77 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS----CHHHHHHHHHHHHTC-CCTTBCCEEEEECCSSSEEEE
T ss_pred HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC----CHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEE
Confidence 36899999999999999999974 778999999987543 346789999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 78 ~Ey~~~g~l~~~~~~~----------------~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~---~~~~ 138 (258)
T d1k2pa_ 78 TEYMANGCLLNYLREM----------------RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGV 138 (258)
T ss_dssp EECCTTEEHHHHHHSG----------------GGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEEC---TTCC
T ss_pred EEccCCCcHHHhhhcc----------------ccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEc---CCCc
Confidence 9999999998876432 35688999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||+|+....... .....||+.|+|||++.+ .++.++|||||||++|||+| |+.||.+.+..++...+..+.
T Consensus 139 ~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~ 218 (258)
T d1k2pa_ 139 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 218 (258)
T ss_dssp EEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC
T ss_pred EEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCC
Confidence 99999999987654332 234679999999998864 56889999999999999998 899999999998888887754
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.. ..+..+++++.+||.+||+.||.+|||+.++++|
T Consensus 219 ~~---~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 219 RL---YRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp CC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred CC---CCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 32 2235688999999999999999999999999986
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-53 Score=414.81 Aligned_cols=247 Identities=22% Similarity=0.304 Sum_probs=204.6
Q ss_pred eeecccCCeEEEEEEEc--CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEEEecc
Q 008127 102 KLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179 (577)
Q Consensus 102 ~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv~e~~ 179 (577)
++||+|+||+||+|.++ .+++.||||++..... .+...+.+.+|+.+|+++ +|||||+++++|..+ .+|||||||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~g~~~~~-~~~lvmE~~ 89 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQL-DNPYIVRMIGICEAE-SWMLVMEMA 89 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEESS-SEEEEEECC
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC-CHHHHHHHHHHHHHHHhC-CCCCCceEEEEeccC-CEEEEEEcC
Confidence 47999999999999864 4567899999865432 344567899999999999 599999999999765 578999999
Q ss_pred CCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCCeeEE
Q 008127 180 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 259 (577)
Q Consensus 180 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~vkl~ 259 (577)
++|+|.+++.. ...+++..++.++.||+.||.|||+++||||||||+|||++. ++.+||+
T Consensus 90 ~~g~L~~~l~~-----------------~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~---~~~~kl~ 149 (277)
T d1xbba_ 90 ELGPLNKYLQQ-----------------NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT---QHYAKIS 149 (277)
T ss_dssp TTEEHHHHHHH-----------------CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---TTEEEEC
T ss_pred CCCcHHHHHhh-----------------ccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccc---cCccccc
Confidence 99999887643 367999999999999999999999999999999999999984 7899999
Q ss_pred ecCCCcccCCCCCc----cccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008127 260 DFGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 333 (577)
Q Consensus 260 DFGla~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~~ 333 (577)
|||+|+........ ....||+.|+|||++.+ .++.++|||||||++|||+| |+.||.+.+..++...+..+...
T Consensus 150 DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~ 229 (277)
T d1xbba_ 150 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 229 (277)
T ss_dssp CCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC
T ss_pred chhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 99999876543322 23579999999998865 46889999999999999998 89999998888888777765322
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHH---hcCcccc
Q 008127 334 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA---LSHPWVR 374 (577)
Q Consensus 334 ~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~i---l~hp~f~ 374 (577)
..++.+|+++.+||.+||+.||.+|||+.++ |+|+|+.
T Consensus 230 ---~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 270 (277)
T d1xbba_ 230 ---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 270 (277)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ---CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence 2235689999999999999999999999998 4566653
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-53 Score=424.75 Aligned_cols=261 Identities=26% Similarity=0.474 Sum_probs=216.9
Q ss_pred cceeeeeeecccCCeEEEEEEE---cCCCCEEEEEEecccccC-chhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATD---KANGDRVAVKKIEKNKMI-LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~---~~~~~~vaiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
++|++++.||+|+||+||+|++ +.+|+.||||++.+.... .....+.+.+|+.+++++.+||||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 4699999999999999999987 447899999998754321 112345678999999999866999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+++|||||.+|+|.+++... ..+++..++.++.||+.||.|||++|||||||||+|||++
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~-----------------~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~--- 163 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQR-----------------ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD--- 163 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHH-----------------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---
T ss_pred eeeeeecccccHHHHHHHhc-----------------ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeec---
Confidence 99999999999999887544 6788999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCC--CCccccccCCccccchhcccC---CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPG--KKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~--~~~~~~~gt~~y~aPE~~~~~---~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
.++.+||+|||+|+..... .......||+.|+|||.+.+. ++.++|||||||+||+|++|+.||.+.+..+....
T Consensus 164 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~ 243 (322)
T d1vzoa_ 164 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE 243 (322)
T ss_dssp TTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH
T ss_pred CCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 4789999999999865432 223467899999999988642 47789999999999999999999988765554444
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCC-----CHHHHhcCcccccc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 376 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rp-----t~~~il~hp~f~~~ 376 (577)
+...........+..+|+++.+||.+||++||.+|| |++|+|+||||+..
T Consensus 244 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i 298 (322)
T d1vzoa_ 244 ISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298 (322)
T ss_dssp HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence 443322222222356899999999999999999999 58999999999864
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-52 Score=426.08 Aligned_cols=261 Identities=28% Similarity=0.463 Sum_probs=210.7
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN--- 170 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~--- 170 (577)
+..+|++++.||+|+||+||+|+++.+|+.||||++.+.. .....+.+.+|+.+|++| +||||+++++++....
T Consensus 6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l-~hp~iv~~~~~~~~~~~~~ 82 (345)
T d1pmea_ 6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQ 82 (345)
T ss_dssp CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTT
T ss_pred cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeeccccc
Confidence 4468999999999999999999999999999999997543 244567889999999999 5999999999997543
Q ss_pred --eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 171 --YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 171 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
.+|++ +|+.+|+|.+++.. ..+++..++.++.||+.||+|||++|||||||||+|||++
T Consensus 83 ~~~~~l~-~~~~~g~L~~~l~~------------------~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~ 143 (345)
T d1pmea_ 83 MKDVYLV-THLMGADLYKLLKT------------------QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 143 (345)
T ss_dssp CCCEEEE-EECCCEEHHHHHHH------------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred cceEEEE-EeecCCchhhhhhc------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEEC
Confidence 34555 55669999987632 4689999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCC----CccccccCCccccchhccc--CCCCCCchhhHHHHHHHHHhCCCCCCCCChhH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 322 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 322 (577)
.++.+||+|||+|....... .....+||+.|+|||++.. .++.++||||+||++|+|++|+.||.+.+..+
T Consensus 144 ---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~ 220 (345)
T d1pmea_ 144 ---TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 220 (345)
T ss_dssp ---TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ---CCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHH
Confidence 47899999999997654322 2345689999999998743 35788999999999999999999998877655
Q ss_pred HHHHHHhC-----------------------CCCCCC----CCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q 008127 323 IFKEVLRN-----------------------KPDFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 375 (577)
Q Consensus 323 ~~~~i~~~-----------------------~~~~~~----~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~ 375 (577)
........ .+.... ..++.+++++.+||.+||+.||.+|||+.++|+||||+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~ 300 (345)
T d1pmea_ 221 QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 300 (345)
T ss_dssp HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred HHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence 54443221 111111 113568899999999999999999999999999999997
Q ss_pred cCCC
Q 008127 376 GGDA 379 (577)
Q Consensus 376 ~~~~ 379 (577)
....
T Consensus 301 ~~~~ 304 (345)
T d1pmea_ 301 YYDP 304 (345)
T ss_dssp TCCG
T ss_pred CCCC
Confidence 6543
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-52 Score=410.95 Aligned_cols=260 Identities=23% Similarity=0.401 Sum_probs=216.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.+ +||||++++++|.+...+++|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~iv 79 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC-ChHHHHHHHHHHHHHHhc-CcCCEEeeccccccccceeEE
Confidence 479999999999999999999999999999999976543 344678899999999999 599999999999999999999
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
++++.+++|...+. ....+++..++.++.|++.||+|||++|||||||||+|||++. ++.
T Consensus 80 ~~~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~---~~~ 139 (292)
T d1unla_ 80 FEFCDQDLKKYFDS-----------------CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR---NGE 139 (292)
T ss_dssp EECCSEEHHHHHHH-----------------TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TCC
T ss_pred eeeccccccccccc-----------------cccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccccc---CCc
Confidence 99998887765442 3478899999999999999999999999999999999999984 678
Q ss_pred eeEEecCCCcccCCCC-CccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCC-CCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFW-DKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~-~~~~~~~~~~i~~~~ 331 (577)
+||+|||.|+...... ......+++.|+|||++.+. ++.++|||||||++|+|++|+.||. +.+..+.+..+....
T Consensus 140 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~ 219 (292)
T d1unla_ 140 LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL 219 (292)
T ss_dssp EEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHH
T ss_pred eeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhc
Confidence 9999999998765433 33455688899999987653 4889999999999999999999865 445555555543211
Q ss_pred CCC-------------------------CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccC
Q 008127 332 PDF-------------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 377 (577)
Q Consensus 332 ~~~-------------------------~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~ 377 (577)
... .....+.+++.+.+||.+||+.||.+||||+|+|+||||++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~ 290 (292)
T d1unla_ 220 GTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp CCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred CCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence 110 0112245788999999999999999999999999999998754
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-51 Score=406.54 Aligned_cols=255 Identities=24% Similarity=0.337 Sum_probs=207.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
++|++++.||+|+||+||+|+++.+ +.||||++..... ..+.+.+|+.+++++ +|||||++++++.+ +.+|+|
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~----~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~-~~~~lv 89 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIV 89 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEE
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccC----CHHHHHHHHHHHHhc-ccCCEeEEEEEEec-CCeEEE
Confidence 5799999999999999999998655 5799999975542 346799999999999 59999999999865 457899
Q ss_pred EeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCCC
Q 008127 176 MELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 255 (577)
Q Consensus 176 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~~ 255 (577)
||||++|+|...+... ....+++.+++.++.||+.||.|||++||+||||||+||||+ .++.
T Consensus 90 ~Ey~~~g~l~~~~~~~---------------~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~---~~~~ 151 (285)
T d1fmka3 90 TEYMSKGSLLDFLKGE---------------TGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLV 151 (285)
T ss_dssp ECCCTTCBHHHHHSHH---------------HHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGC
T ss_pred EEecCCCchhhhhhhc---------------ccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEEC---CCCc
Confidence 9999999998876543 235689999999999999999999999999999999999998 4789
Q ss_pred eeEEecCCCcccCCCCC--ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCC-CCCCCCChhHHHHHHHhCC
Q 008127 256 LKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 256 vkl~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~-~Pf~~~~~~~~~~~i~~~~ 331 (577)
+||+|||+|+....... .....||+.|+|||++. +.++.++|||||||++|||++|. +||.+....+++..+..+.
T Consensus 152 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~ 231 (285)
T d1fmka3 152 CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 231 (285)
T ss_dssp EEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC
T ss_pred EEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC
Confidence 99999999987654332 23467999999999876 45688999999999999999954 4555666666777776543
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc--CccccccCC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVREGGD 378 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~--hp~f~~~~~ 378 (577)
. .+..+.+|+++.+||.+||+.||++|||++++++ ++||+...+
T Consensus 232 ~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p 277 (285)
T d1fmka3 232 R---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 277 (285)
T ss_dssp C---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred C---CCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCC
Confidence 2 2234678999999999999999999999999998 899987643
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-51 Score=405.59 Aligned_cols=249 Identities=24% Similarity=0.345 Sum_probs=202.2
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
++|++++.||+|+||.||+|++..++ ..||||.+.... .....+.+.+|+.+++++ +|||||++++++. ++.+
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~~ 82 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPV 82 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SSSC
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCeE
Confidence 47999999999999999999987543 468899885443 344567899999999999 5999999999996 4678
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
|+|||||++|+|.+++... ...+++..++.++.||+.||.|||+++||||||||+|||++.
T Consensus 83 ~iv~E~~~~g~l~~~~~~~----------------~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~--- 143 (273)
T d1mp8a_ 83 WIIMELCTLGELRSFLQVR----------------KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS--- 143 (273)
T ss_dssp EEEEECCTTEEHHHHHHHT----------------TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---
T ss_pred EEEEEeccCCcHHhhhhcc----------------CCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecC---
Confidence 9999999999998866432 467899999999999999999999999999999999999984
Q ss_pred CCCeeEEecCCCcccCCCC--CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 328 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~ 328 (577)
++.+||+|||+|+...... ......||+.|+|||++.+ .++.++|||||||++|||++ |.+||.+.+..+++..+.
T Consensus 144 ~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~ 223 (273)
T d1mp8a_ 144 NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 223 (273)
T ss_dssp TTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred CCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 7889999999998765332 2234578999999999864 56889999999999999998 899999999999988887
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 329 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 329 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
.+... +.++.+|+++.+||.+||..||.+|||+.++++|
T Consensus 224 ~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 224 NGERL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp TTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCCC---CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 76432 3346789999999999999999999999999764
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-51 Score=421.00 Aligned_cols=260 Identities=30% Similarity=0.435 Sum_probs=213.3
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD---- 169 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~---- 169 (577)
+.++|+++++||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+++|++| +|||||++++++...
T Consensus 16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~h~~iv~~~~~~~~~~~~~ 93 (348)
T d2gfsa1 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLE 93 (348)
T ss_dssp EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSTT
T ss_pred CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhc-ChHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeccccc
Confidence 35689999999999999999999999999999999976543 234556789999999999 599999999998643
Q ss_pred -CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 170 -NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 170 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...++|++|+.||+|.+++ ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 94 ~~~~~~i~~~~~gg~L~~~~------------------~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~ 155 (348)
T d2gfsa1 94 EFNDVYLVTHLMGADLNNIV------------------KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 155 (348)
T ss_dssp TCCCCEEEEECCSEEHHHHH------------------TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred cCceEEEEEeecCCchhhhc------------------ccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccc
Confidence 3345667778899998765 235799999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC--CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 326 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~ 326 (577)
.++.+|++|||+|.... .......||+.|+|||++.+. ++.++|||||||++|+|++|++||.+.+.......
T Consensus 156 ---~~~~~kl~dfg~a~~~~--~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~ 230 (348)
T d2gfsa1 156 ---EDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230 (348)
T ss_dssp ---TTCCEEECCC----CCT--GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ---ccccccccccchhcccC--cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 47899999999997653 334567899999999986543 47899999999999999999999998887776666
Q ss_pred HHhCCCCC-----------------------CCC----CCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCccccccCC
Q 008127 327 VLRNKPDF-----------------------RRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 378 (577)
Q Consensus 327 i~~~~~~~-----------------------~~~----~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp~f~~~~~ 378 (577)
+....... ... .+..+++++.+||.+||+.||.+|||+.|+|+||||++...
T Consensus 231 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~ 309 (348)
T d2gfsa1 231 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309 (348)
T ss_dssp HHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred HHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCC
Confidence 64422111 111 12467899999999999999999999999999999997654
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-51 Score=401.98 Aligned_cols=249 Identities=21% Similarity=0.306 Sum_probs=200.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC----CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCe
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 171 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~----~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 171 (577)
..|++.++||+|+||.||+|.++.++ ..||||++.... .......+.+|+.+++++ +|||||++++++...+.
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l-~H~nIv~~~g~~~~~~~ 83 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKP 83 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSS
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc--ChHHHHHHHHHHHHHHhc-CCCCEeeeeEEEecCCc
Confidence 46999999999999999999987655 479999986543 234556789999999999 49999999999999999
Q ss_pred EEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC
Q 008127 172 VYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 251 (577)
Q Consensus 172 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~ 251 (577)
+++|||||.+|++.+.+... ...+++..+..++.||+.||+|||+++||||||||+||||+
T Consensus 84 ~~~v~e~~~~~~l~~~~~~~----------------~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~--- 144 (283)
T d1mqba_ 84 MMIITEYMENGALDKFLREK----------------DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN--- 144 (283)
T ss_dssp EEEEEECCTTEEHHHHHHHT----------------TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---
T ss_pred eEEEEEecccCcchhhhhcc----------------cccccHHHHHHHHHHHHHhhhhccccccccCccccceEEEC---
Confidence 99999999999998765432 46799999999999999999999999999999999999998
Q ss_pred CCCCeeEEecCCCcccCCCCC----ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhC-CCCCCCCChhHHHH
Q 008127 252 EDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG-RRPFWDKTEDGIFK 325 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg-~~Pf~~~~~~~~~~ 325 (577)
.++.+||+|||+|+....... .....||+.|+|||++.+ .++.++|||||||++|||++| .+||.+.+..+++.
T Consensus 145 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~ 224 (283)
T d1mqba_ 145 SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK 224 (283)
T ss_dssp TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred CCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHH
Confidence 478999999999987654322 234568999999998865 568899999999999999995 44555566666776
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..+.. .+....++.++.+||.+||..||++|||+.++++
T Consensus 225 ~i~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 225 AINDGFR---LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp HHHTTCC---CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHhccCC---CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 6655432 2223568899999999999999999999999976
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-51 Score=418.92 Aligned_cols=257 Identities=28% Similarity=0.451 Sum_probs=201.4
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc------
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED------ 168 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~------ 168 (577)
.++|+++++||+|+||+||+|+++.+|+.||||++.+... .......+.+|+.+|+++ +|||||+++++|..
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~f~~~~~~~~ 93 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEE 93 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc-CHHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeccccccc
Confidence 3689999999999999999999999999999999976543 344567789999999999 59999999999963
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
...+|+|||||.++ +.+.+ ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 94 ~~~~~iv~Ey~~~~-l~~~~-------------------~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~ 153 (355)
T d2b1pa1 94 FQDVYLVMELMDAN-LCQVI-------------------QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 153 (355)
T ss_dssp CCEEEEEEECCSEE-HHHHH-------------------TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred CceeEEEEeccchH-HHHhh-------------------hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc
Confidence 46899999999665 44432 25689999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCCCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~i 327 (577)
.++.+|++|||+++...........+||+.|+|||++.+. +++++||||+||++|+|++|++||.+.+.......+
T Consensus 154 ---~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i 230 (355)
T d2b1pa1 154 ---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 230 (355)
T ss_dssp ---TTCCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred ---cccceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHH
Confidence 4788999999999887766666778899999999998754 588999999999999999999999888766655554
Q ss_pred Hh----------------------CCCCCCCCCC----------------CCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 328 LR----------------------NKPDFRRKPW----------------PSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 328 ~~----------------------~~~~~~~~~~----------------~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+. .........+ ...++++.+||.+||..||++||||+|+|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~ 310 (355)
T d2b1pa1 231 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310 (355)
T ss_dssp HHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 32 1111111110 113567899999999999999999999999
Q ss_pred Ccccccc
Q 008127 370 HPWVREG 376 (577)
Q Consensus 370 hp~f~~~ 376 (577)
||||+..
T Consensus 311 Hpw~~~~ 317 (355)
T d2b1pa1 311 HPYINVW 317 (355)
T ss_dssp STTTGGG
T ss_pred CcccCCC
Confidence 9999864
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-51 Score=401.78 Aligned_cols=251 Identities=22% Similarity=0.331 Sum_probs=203.1
Q ss_pred cceeeeeeecccCCeEEEEEEEcCC-C--CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKAN-G--DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~-~--~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
++|++.+.||+|+||.||+|++..+ + ..||||++.+.........+.+.+|+.+|+++ +|||||++++++.++ .+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~~-~~ 85 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTP-PM 85 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSS-SC
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeec-ch
Confidence 4699999999999999999986533 3 36899998776554556678899999999999 599999999999764 67
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++|||||++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 86 ~lv~e~~~~~~l~~~~~~~----------------~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~--- 146 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKH----------------QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT--- 146 (273)
T ss_dssp EEEEECCTTCBHHHHHHHH----------------GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE---
T ss_pred heeeeeecCcchhhhhhcc----------------cCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcccc---
Confidence 8999999999999877543 356899999999999999999999999999999999999984
Q ss_pred CCCeeEEecCCCcccCCCCC----ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 326 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 326 (577)
++.+||+|||+++....... .....||+.|+|||++.+. ++.++|||||||++|||+| |+.||.+.+..+....
T Consensus 147 ~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~ 226 (273)
T d1u46a_ 147 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 226 (273)
T ss_dssp TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH
T ss_pred ccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHH
Confidence 67899999999987654332 2244688899999988765 4788999999999999998 8999999999999988
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+......++ .++.+|+++.+||.+||..||++|||+.++++
T Consensus 227 i~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 227 IDKEGERLP--RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp HHTSCCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCC--CcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 887654433 34678999999999999999999999999863
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-51 Score=407.91 Aligned_cols=249 Identities=22% Similarity=0.274 Sum_probs=205.3
Q ss_pred ceeeeeeecccCCeEEEEEEEcCCCC----EEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeE
Q 008127 97 RYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172 (577)
Q Consensus 97 ~y~~~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 172 (577)
+|+++++||+|+||+||+|.+..+|+ +||+|.+.... .....+.+.+|+.+++++ +|||||+++++|.++ ..
T Consensus 10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~-~~ 85 (317)
T d1xkka_ 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TV 85 (317)
T ss_dssp TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHC-CCTTBCCEEEEEESS-SE
T ss_pred HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC-Ce
Confidence 69999999999999999999988876 57888775432 234567899999999999 599999999999875 46
Q ss_pred EEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCC
Q 008127 173 YIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 252 (577)
Q Consensus 173 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~ 252 (577)
++++|||.+|+|.+.+... ...+++..++.++.||+.||.|||++|||||||||+|||++.
T Consensus 86 ~~v~e~~~~~~l~~~~~~~----------------~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~--- 146 (317)
T d1xkka_ 86 QLITQLMPFGCLLDYVREH----------------KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--- 146 (317)
T ss_dssp EEEEECCTTCBHHHHHHHT----------------SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE---
T ss_pred eEEEEeccCCccccccccc----------------ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCC---
Confidence 7888999999998876432 467999999999999999999999999999999999999984
Q ss_pred CCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008127 253 DSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 327 (577)
Q Consensus 253 ~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i 327 (577)
++.+||+|||+|+....... .....||+.|+|||++.+ .++.++|||||||++|||+| |.+||.+.+..++...+
T Consensus 147 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i 226 (317)
T d1xkka_ 147 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 226 (317)
T ss_dssp TTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHH
T ss_pred CCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence 78999999999987654332 234568999999998764 56889999999999999998 89999888888887777
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcCc
Q 008127 328 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 371 (577)
Q Consensus 328 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~hp 371 (577)
..+... +.++.+++++.+||.+||..||.+|||+.++++|.
T Consensus 227 ~~~~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l 267 (317)
T d1xkka_ 227 EKGERL---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 267 (317)
T ss_dssp HHTCCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HcCCCC---CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHH
Confidence 665422 22356889999999999999999999999999873
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-51 Score=404.51 Aligned_cols=267 Identities=23% Similarity=0.256 Sum_probs=203.0
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-C
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-D 169 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~ 169 (577)
++|++++.||+|+||.||+|++.. +++.||||++..... ....+.+.+|+.++.++.+||||+.+++++.. +
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~ 90 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 90 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC--cHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence 579999999999999999999754 456899999865432 34567788999999998889999999998765 4
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
+.+++|||||++|+|.+++........ +............+++..++.++.||+.||.|||+++||||||||+||||+
T Consensus 91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~- 168 (299)
T d1ywna1 91 GPLMVIVEFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 168 (299)
T ss_dssp SCCEEEEECCTTCBHHHHHHHTGGGBC-C-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-
T ss_pred CeEEEEEEecCCCcHHHHHHhcccccc-ccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeEC-
Confidence 578999999999999999875422110 000000111235689999999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCC---CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhC-CCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG-RRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg-~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||+|+...... .....+||+.|+|||++.+ .++.++|||||||++|||++| .+||.+....+.+
T Consensus 169 --~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~ 246 (299)
T d1ywna1 169 --EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 246 (299)
T ss_dssp --GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred --CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 47899999999998654332 2345689999999998865 468899999999999999986 5678777666655
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
..++.....+. .++.+++++.+||.+||+.||.+|||+.++++|
T Consensus 247 ~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 247 CRRLKEGTRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp HHHHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhcCCCCC--CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 55554433322 235689999999999999999999999999986
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-51 Score=408.43 Aligned_cols=266 Identities=23% Similarity=0.302 Sum_probs=215.8
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCE--EEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~--vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
++|++.+.||+|+||.||+|+++.+|.. ||||.+.... .....+.+.+|+.+|.++.+|||||+++++|..++.+|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc--ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 4799999999999999999999988875 6677764332 23345679999999999866999999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|||||++|+|.++|......... ............+++..+..++.||+.||.|||+++||||||||+|||++. +
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~---~ 163 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETD-PAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE---N 163 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHC-HHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG---G
T ss_pred EEEEecCCCcHHHHHhhccccccc-hhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcC---C
Confidence 999999999999988654222111 112223335578999999999999999999999999999999999999984 7
Q ss_pred CCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCC-CCCCCCChhHHHHHHHhCC
Q 008127 254 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVLRNK 331 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~-~Pf~~~~~~~~~~~i~~~~ 331 (577)
+.+||+|||+|+............||+.|+|||.+.+ .++.++|||||||++|||++|. +||.+.+..+++..+..+.
T Consensus 164 ~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~ 243 (309)
T d1fvra_ 164 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 243 (309)
T ss_dssp GCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC
T ss_pred CceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcC
Confidence 8999999999987665555556689999999998864 4688999999999999999965 6788888888888876653
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 332 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 332 ~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
. ...+..+++++.+||.+||+.||++|||+.+++++
T Consensus 244 ~---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 244 R---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp C---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred C---CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 2 22345689999999999999999999999999986
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-50 Score=394.05 Aligned_cols=243 Identities=22% Similarity=0.327 Sum_probs=199.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-CCeEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNYVYI 174 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~~~l 174 (577)
++|++++.||+|+||.||+|++ +|..||||++.... ..+.+.+|+.+++++ +||||+++++++.+ .+.+|+
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~-----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~l 78 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYI 78 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEE
T ss_pred HHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcHH-----HHHHHHHHHHHHHhC-CCCCEeeEEEEEEecCCcEEE
Confidence 3699999999999999999986 47899999996543 456789999999999 59999999999854 567899
Q ss_pred EEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCCC
Q 008127 175 AMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 254 (577)
Q Consensus 175 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~~ 254 (577)
|||||++|+|.+++.... ...+++..++.++.||+.||.|||+.+||||||||+|||++ .++
T Consensus 79 v~ey~~~g~L~~~l~~~~---------------~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~---~~~ 140 (262)
T d1byga_ 79 VTEYMAKGSLVDYLRSRG---------------RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDN 140 (262)
T ss_dssp EECCCTTEEHHHHHHHHH---------------HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTS
T ss_pred EEeccCCCCHHHHHHhcC---------------CCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheec---CCC
Confidence 999999999999886441 13478999999999999999999999999999999999998 578
Q ss_pred CeeEEecCCCcccCCCCCccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008127 255 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 332 (577)
Q Consensus 255 ~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~~ 332 (577)
.+||+|||+++..... .....+|+.|+|||++. +.+++++|||||||++|||+| |++||...+..++...+..+..
T Consensus 141 ~~kl~dfg~s~~~~~~--~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~ 218 (262)
T d1byga_ 141 VAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 218 (262)
T ss_dssp CEEECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC
T ss_pred CEeecccccceecCCC--CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC
Confidence 9999999999876432 34457899999999875 556889999999999999998 7999988888888888766432
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 333 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 333 ~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
....+.+++++.+||.+||..||.+|||+.++++
T Consensus 219 ---~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~ 252 (262)
T d1byga_ 219 ---MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 252 (262)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 1223568899999999999999999999999976
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-50 Score=397.24 Aligned_cols=265 Identities=24% Similarity=0.359 Sum_probs=210.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCC-------CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANG-------DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 168 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~-------~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 168 (577)
++|++++.||+|+||.||+|++..++ ..||||++.+.. .......+.+|+.++.++.+|||||+++++|.+
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~ 90 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 90 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence 58999999999999999999876554 479999987643 234567889999999999779999999999999
Q ss_pred CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEee
Q 008127 169 DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 248 (577)
Q Consensus 169 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~ 248 (577)
++.+|+|||||++|+|.+++..... ................+++..++.++.||+.||+|||+++||||||||+|||++
T Consensus 91 ~~~~~~v~e~~~~g~l~~~i~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~ 169 (299)
T d1fgka_ 91 DGPLYVIVEYASKGNLREYLQARRP-PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 169 (299)
T ss_dssp SSSCEEEECCCTTCBHHHHHHTTSC-C------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCeEEEEEEccCCCcHHHHHHhhcC-CccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeec
Confidence 9999999999999999998864311 111111111222346799999999999999999999999999999999999998
Q ss_pred cCCCCCCeeEEecCCCcccCCCC---CccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHH
Q 008127 249 SAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 323 (577)
Q Consensus 249 ~~~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~ 323 (577)
.++.+||+|||+++...... .....+||+.|+|||++. +.++.++|||||||++|||++ |.+||.+.+..++
T Consensus 170 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~ 246 (299)
T d1fgka_ 170 ---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246 (299)
T ss_dssp ---TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred ---CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHH
Confidence 47899999999998765432 234568999999999875 567899999999999999998 7999988888887
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 324 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 324 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
+..+..+. .+ ..+..+|+++.+||.+||+.||.+|||+.++++
T Consensus 247 ~~~i~~~~-~~--~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 247 FKLLKEGH-RM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp HHHHHTTC-CC--CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHcCC-CC--CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 77766543 22 223568999999999999999999999999976
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.2e-50 Score=398.56 Aligned_cols=266 Identities=18% Similarity=0.219 Sum_probs=213.7
Q ss_pred ccceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 169 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 169 (577)
.++|++++.||+|+||+||+|+++ .+++.||||++.... .....+.+.+|+.+|+++ +||||++++++|...
T Consensus 12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~ 88 (301)
T d1lufa_ 12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DNPNIVKLLGVCAVG 88 (301)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSS
T ss_pred HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhc-CCCCcccceeeeccC
Confidence 357999999999999999999875 356789999987543 234567899999999999 599999999999999
Q ss_pred CeEEEEEeccCCCchhHHHHHHhhhhhhh-------hhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCC
Q 008127 170 NYVYIAMELCEGGELLDRILAKMISTTLT-------SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 242 (577)
Q Consensus 170 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp 242 (577)
+..++|||||++|+|.+++.......... ............+++..++.++.||+.||.|||+++||||||||
T Consensus 89 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp 168 (301)
T d1lufa_ 89 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT 168 (301)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred CceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcc
Confidence 99999999999999999886532111100 00111112335689999999999999999999999999999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCCCC---CccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCC-CCCCC
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR-RPFWD 317 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~-~Pf~~ 317 (577)
+|||++. ++.+||+|||+|+...+.. ......||+.|+|||++.+ .++.++|||||||++|||++|. +||.+
T Consensus 169 ~NILld~---~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~ 245 (301)
T d1lufa_ 169 RNCLVGE---NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 245 (301)
T ss_dssp GGEEECG---GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred cceEECC---CCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC
Confidence 9999984 7889999999997654332 2335679999999998875 5688999999999999999985 68988
Q ss_pred CChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 318 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 318 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+..++...+..+... ..+..+++++.+||.+||+.||++|||+.+|++
T Consensus 246 ~~~~e~~~~v~~~~~~---~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 246 MAHEEVIYYVRDGNIL---ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp SCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCC---CCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8888888888776532 223578999999999999999999999999864
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-49 Score=395.22 Aligned_cols=264 Identities=20% Similarity=0.277 Sum_probs=219.9
Q ss_pred cceeeeeeecccCCeEEEEEEEcC-----CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++++.||+|+||.||+|.++. ++..||||++.... .......+.+|+.+++++ +|||||++++++..++
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~ 96 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQ 96 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHc-CCCCEeeeeeEEecCC
Confidence 589999999999999999998753 45789999997543 234556789999999999 5999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 250 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~ 250 (577)
.+++|||||++|+|.+++....... ........++...+..++.||+.||.|||+++|+||||||+|||++
T Consensus 97 ~~~lv~e~~~~g~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld-- 167 (308)
T d1p4oa_ 97 PTLVIMELMTRGDLKSYLRSLRPAM-------ANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA-- 167 (308)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHH-------HHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC--
T ss_pred ceeEEEeecCCCCHHHHHHhccccc-------ccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeec--
Confidence 9999999999999999886542111 1111234578999999999999999999999999999999999998
Q ss_pred CCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhC-CCCCCCCChhHHHH
Q 008127 251 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCG-RRPFWDKTEDGIFK 325 (577)
Q Consensus 251 ~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg-~~Pf~~~~~~~~~~ 325 (577)
.++++||+|||+|+....... .....||+.|+|||.+.+. ++.++|||||||++|||+|| .+||.+.+..+.+.
T Consensus 168 -~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~ 246 (308)
T d1p4oa_ 168 -EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 246 (308)
T ss_dssp -TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHH
T ss_pred -CCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 578999999999986643322 2345799999999988754 57899999999999999998 58888888888888
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc------Cccccc
Q 008127 326 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS------HPWVRE 375 (577)
Q Consensus 326 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~------hp~f~~ 375 (577)
.+..+... ...+.+|+.+.+||.+||+.||.+|||+.++++ +|+|++
T Consensus 247 ~i~~~~~~---~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~ 299 (308)
T d1p4oa_ 247 FVMEGGLL---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299 (308)
T ss_dssp HHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred HHHhCCCC---CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence 88775432 223568899999999999999999999999998 666654
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-49 Score=395.24 Aligned_cols=267 Identities=25% Similarity=0.290 Sum_probs=215.0
Q ss_pred cceeeeeeecccCCeEEEEEEEc-----CCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 170 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 170 (577)
++|++++.||+|+||.||+|++. .+++.||||++..... ......+.+|+.++..+.+|||||++++++...+
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~ 100 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccC--HHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC
Confidence 58999999999999999999863 4667999999976542 3456679999999999977999999999999999
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhh-hhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeec
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLT-SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 249 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~ 249 (577)
.+|+|||||++|+|.+++.......... ..+.........+++..++.++.||+.||.|||+++||||||||+|||++
T Consensus 101 ~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~- 179 (311)
T d1t46a_ 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT- 179 (311)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE-
T ss_pred EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccc-
Confidence 9999999999999999887542111000 00011112345799999999999999999999999999999999999998
Q ss_pred CCCCCCeeEEecCCCcccCCCCC---ccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHh-CCCCCCCCChhHHH
Q 008127 250 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 324 (577)
Q Consensus 250 ~~~~~~vkl~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~ 324 (577)
.++.+||+|||+++....... ....+||+.|+|||++.+ .++.++|||||||++|||+| |.+||.+....+.+
T Consensus 180 --~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~ 257 (311)
T d1t46a_ 180 --HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (311)
T ss_dssp --TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred --ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 478999999999987754332 234689999999998874 56889999999999999998 66667777776766
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 325 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 325 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
.+++....... ....+|+++.+||.+||+.||.+|||+.++++
T Consensus 258 ~~~i~~~~~~~--~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 258 YKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp HHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCC--CcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 66665543322 22467899999999999999999999999986
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-49 Score=396.20 Aligned_cols=261 Identities=21% Similarity=0.301 Sum_probs=206.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+.++|++++.||+|+||+||+|++..+|+.||||++..... ...+.+|+++++.+.+|++|+.+..++...+..+
T Consensus 5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ 79 (299)
T d1ckia_ 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79 (299)
T ss_dssp ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEE
T ss_pred ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-----CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEE
Confidence 34689999999999999999999999999999998865432 2347889999999975556777777778889999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+||||| +++|.+.+.. ....+++..+..++.|++.||+|||++|||||||||+|||++..+.+
T Consensus 80 ivme~~-~~~l~~~~~~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~ 142 (299)
T d1ckia_ 80 MVMELL-GPSLEDLFNF----------------CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKG 142 (299)
T ss_dssp EEEECC-CCBHHHHHHH----------------TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGT
T ss_pred EEEEEc-CCchhhhhhh----------------ccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCC
Confidence 999999 5666654432 34679999999999999999999999999999999999999765567
Q ss_pred CCeeEEecCCCcccCCCC--------CccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCChhHHH
Q 008127 254 SSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 324 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 324 (577)
..+||+|||+|+.+.... .....+||+.|+|||++.+. ++.++|||||||++|||++|+.||.........
T Consensus 143 ~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~ 222 (299)
T d1ckia_ 143 NLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR 222 (299)
T ss_dssp TCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-----
T ss_pred ceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHH
Confidence 789999999998765432 22456899999999998765 688999999999999999999999876554433
Q ss_pred HHHH---hCCCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCHH---HHhcCcccccc
Q 008127 325 KEVL---RNKPDF-RRKPWPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREG 376 (577)
Q Consensus 325 ~~i~---~~~~~~-~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~---~il~hp~f~~~ 376 (577)
..+. ...... ....++.+|+++.+||.+||..||.+||++. ++|+|+|.+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~ 281 (299)
T d1ckia_ 223 QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 281 (299)
T ss_dssp --HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcC
Confidence 2221 111001 1112356889999999999999999999987 55778876543
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.2e-48 Score=384.41 Aligned_cols=248 Identities=21% Similarity=0.243 Sum_probs=200.5
Q ss_pred eeeeeeecccCCeEEEEEEEcCCC---CEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEc-CCeEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED-DNYVY 173 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~-~~~~~ 173 (577)
+.+.++||+|+||+||+|++..++ ..||||++.+.. .....+.+.+|+++|++++ |||||++++++.. ++.++
T Consensus 29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~ 105 (311)
T d1r0pa_ 29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL 105 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCC--CHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEETTTEEE
T ss_pred eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhCC-CCCEeEEeEEEEecCCceE
Confidence 344678999999999999986643 368999986432 3456788999999999995 9999999998764 67899
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCCCC
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 253 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~~~ 253 (577)
+|||||++|+|.+++.. ....+++..++.++.|++.||.|||+.+|+||||||+|||++ ++
T Consensus 106 lv~E~~~~g~l~~~~~~----------------~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~---~~ 166 (311)
T d1r0pa_ 106 VVLPYMKHGDLRNFIRN----------------ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---EK 166 (311)
T ss_dssp EEEECCTTCBHHHHHHC----------------TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TT
T ss_pred EEEEEeecCchhhhhcc----------------ccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeEC---CC
Confidence 99999999999886642 235677888999999999999999999999999999999998 47
Q ss_pred CCeeEEecCCCcccCCCCC-----ccccccCCccccchhcc-cCCCCCCchhhHHHHHHHHHhCCCCCCCC-ChhHHHHH
Q 008127 254 SSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKE 326 (577)
Q Consensus 254 ~~vkl~DFGla~~~~~~~~-----~~~~~gt~~y~aPE~~~-~~~~~~~DiwSlG~il~el~tg~~Pf~~~-~~~~~~~~ 326 (577)
+.+||+|||+++....... .....||+.|+|||++. +.++.++|||||||++|||+||..||... +..++...
T Consensus 167 ~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~ 246 (311)
T d1r0pa_ 167 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 246 (311)
T ss_dssp CCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHH
T ss_pred CCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence 8999999999987643322 22457899999999876 56788999999999999999977777654 44455566
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhcC
Q 008127 327 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 370 (577)
Q Consensus 327 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~h 370 (577)
+..+.... ..+.+++++.+||.+||..||++|||+.|+++|
T Consensus 247 i~~g~~~~---~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 247 LLQGRRLL---QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCCC---CcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 66554322 224678999999999999999999999999986
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.4e-47 Score=379.93 Aligned_cols=254 Identities=20% Similarity=0.314 Sum_probs=206.0
Q ss_pred cccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 94 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
+.++|++++.||+|+||+||+|++..+|+.||||++..... ...+.+|+++++.|.+|+|++.+++++......|
T Consensus 3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 77 (293)
T d1csna_ 3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 77 (293)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccE
Confidence 45689999999999999999999999999999998865432 2346789999999987799999999999999999
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCCCcEEeecCC--
Q 008127 174 IAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-- 251 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp~NILl~~~~-- 251 (577)
+||||| +++|.+.+... ...++...+..++.|++.||+|||++|||||||||+|||++...
T Consensus 78 ~vme~~-~~~l~~~~~~~----------------~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~ 140 (293)
T d1csna_ 78 LVIDLL-GPSLEDLLDLC----------------GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSK 140 (293)
T ss_dssp EEEECC-CCBHHHHHHHT----------------TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSST
T ss_pred EEEEec-CCCHHHHHHhh----------------ccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccc
Confidence 999999 78988766432 35799999999999999999999999999999999999997421
Q ss_pred CCCCeeEEecCCCcccCCC--------CCccccccCCccccchhcccC-CCCCCchhhHHHHHHHHHhCCCCCCCCCh--
Q 008127 252 EDSSLKATDFGLSDFIKPG--------KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE-- 320 (577)
Q Consensus 252 ~~~~vkl~DFGla~~~~~~--------~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwSlG~il~el~tg~~Pf~~~~~-- 320 (577)
..+.+||+|||+|+..... ......+||+.|||||++.+. ++.++|||||||++|+|++|+.||.+...
T Consensus 141 ~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~ 220 (293)
T d1csna_ 141 NANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT 220 (293)
T ss_dssp TTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC
T ss_pred cCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchh
Confidence 3568999999999865432 123456899999999998765 68899999999999999999999976543
Q ss_pred -hHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 321 -DGIFKEVLRNKPDF-RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 321 -~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
...+..+....... .....+.+|+++.+++..|+..+|.+||+++.+.+
T Consensus 221 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~ 271 (293)
T d1csna_ 221 NKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271 (293)
T ss_dssp HHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 23333332221111 11123568899999999999999999999876643
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-47 Score=378.90 Aligned_cols=247 Identities=23% Similarity=0.283 Sum_probs=186.6
Q ss_pred ccceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC----
Q 008127 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN---- 170 (577)
Q Consensus 95 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~---- 170 (577)
.++|.+.+.||+|+||.||+|++ +|+.||||++.... ........|+..+..+ +|||||++++++.+.+
T Consensus 2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~----~~~~~~e~ei~~~~~~-~HpnIv~~~~~~~~~~~~~~ 74 (303)
T d1vjya_ 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhHHHHHHHHHHHhhC-CCCcCcceEEEEEeCCCcce
Confidence 46799999999999999999974 68999999986542 1122233444455566 5999999999987543
Q ss_pred eEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh--------cCceeccCCC
Q 008127 171 YVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL--------HGLVHRDMKP 242 (577)
Q Consensus 171 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~--------~~iiHrDlKp 242 (577)
.+|+|||||++|+|.+++.. ..+++..++.++.|++.||.|||+ +|||||||||
T Consensus 75 ~~~lv~Ey~~~g~L~~~l~~------------------~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp 136 (303)
T d1vjya_ 75 QLWLVSDYHEHGSLFDYLNR------------------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 136 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHH------------------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCG
T ss_pred EEEEEEecccCCCHHHHHhc------------------CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCc
Confidence 68999999999999998742 358899999999999999999996 5999999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCCCC-----CccccccCCccccchhcccC-------CCCCCchhhHHHHHHHHHh
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLC 310 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-------~~~~~DiwSlG~il~el~t 310 (577)
+||||+ .++.+||+|||+++...... .....+||+.|+|||++.+. ++.++|||||||+||||+|
T Consensus 137 ~NILl~---~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~t 213 (303)
T d1vjya_ 137 KNILVK---KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213 (303)
T ss_dssp GGEEEC---TTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEc---CCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhh
Confidence 999998 57899999999998764432 22356899999999998754 3567999999999999999
Q ss_pred CCCCCCCC---------------ChhHHHHHHHhCCCCCCC-CCC--CCCCHHHHHHHHHccccCcCCCCCHHHHhc
Q 008127 311 GRRPFWDK---------------TEDGIFKEVLRNKPDFRR-KPW--PSISNSAKDFVKKLLVKDPRARLTAAQALS 369 (577)
Q Consensus 311 g~~Pf~~~---------------~~~~~~~~i~~~~~~~~~-~~~--~~~s~~~~~li~~~l~~dP~~Rpt~~~il~ 369 (577)
|..||... ........+......... ..+ ...+..+.+|+.+||..||++|||+.++++
T Consensus 214 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~ 290 (303)
T d1vjya_ 214 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred CCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 98887321 112222222222211110 011 112245889999999999999999999876
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.5e-45 Score=372.61 Aligned_cols=269 Identities=24% Similarity=0.417 Sum_probs=202.1
Q ss_pred cccc-cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhc----------CCCCee
Q 008127 92 KDFD-RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA----------GHENVV 160 (577)
Q Consensus 92 ~~~~-~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~----------~hpniv 160 (577)
+.+. .+|+++++||+|+||+||+|+++.+|+.||||++.+.. ...+.+.+|+.+++.+. .||||+
T Consensus 8 ~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~----~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv 83 (362)
T d1q8ya_ 8 EPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHIL 83 (362)
T ss_dssp CEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBC
T ss_pred CCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc----cchHHHHHHHHHHHHhcchhhhhhhhcCcCceE
Confidence 3343 47999999999999999999999999999999997653 34567788999998874 368899
Q ss_pred EEEEEEEc--CCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-cCcee
Q 008127 161 KFYNAFED--DNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVH 237 (577)
Q Consensus 161 ~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~-~~iiH 237 (577)
++++++.. ....+++++++..+....... .......+++..++.++.||+.||.|||+ .||+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvH 149 (362)
T d1q8ya_ 84 KLLDHFNHKGPNGVHVVMVFEVLGENLLALI--------------KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIH 149 (362)
T ss_dssp CCCEEEEEEETTEEEEEEEECCCCEEHHHHH--------------HHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred EEEEEeeeccccceeeeeeeccccccccccc--------------ccccccCCcHHHHHHHHHHHHHHHHHHhhhcCccc
Confidence 99998764 456777888776665443322 22345788999999999999999999998 89999
Q ss_pred ccCCCCcEEeecCCCC---CCeeEEecCCCcccCCCCCccccccCCccccchhccc-CCCCCCchhhHHHHHHHHHhCCC
Q 008127 238 RDMKPENFLFKSAKED---SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR 313 (577)
Q Consensus 238 rDlKp~NILl~~~~~~---~~vkl~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwSlG~il~el~tg~~ 313 (577)
|||||+|||++..+.. ..+||+|||.|..... .....+||+.|+|||++.+ .++.++||||+||++++|++|+.
T Consensus 150 rDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~ 227 (362)
T d1q8ya_ 150 TDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 227 (362)
T ss_dssp SCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred ccCChhHeeeeccCcccccceeeEeeccccccccc--ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCC
Confidence 9999999999852211 2499999999976542 3345689999999998764 56899999999999999999999
Q ss_pred CCCCCChh------HHHHHHHh--CC-------------------------CCCC-----------CCCCCCCCHHHHHH
Q 008127 314 PFWDKTED------GIFKEVLR--NK-------------------------PDFR-----------RKPWPSISNSAKDF 349 (577)
Q Consensus 314 Pf~~~~~~------~~~~~i~~--~~-------------------------~~~~-----------~~~~~~~s~~~~~l 349 (577)
||...... ..+...+. +. .... ...++..++++.+|
T Consensus 228 pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 307 (362)
T d1q8ya_ 228 LFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 307 (362)
T ss_dssp CC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHH
T ss_pred CCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHH
Confidence 99653321 11111110 00 0000 00112245679999
Q ss_pred HHHccccCcCCCCCHHHHhcCccccccCCCC
Q 008127 350 VKKLLVKDPRARLTAAQALSHPWVREGGDAS 380 (577)
Q Consensus 350 i~~~l~~dP~~Rpt~~~il~hp~f~~~~~~~ 380 (577)
|.+||++||.+|||++|+|+||||++.....
T Consensus 308 l~~mL~~dP~~Rpta~e~L~Hp~f~~~~~~~ 338 (362)
T d1q8ya_ 308 LSPMLQLDPRKRADAGGLVNHPWLKDTLGME 338 (362)
T ss_dssp HGGGGCSSTTTCBCHHHHHTCGGGTTCTTCT
T ss_pred HHHHCCCChhHCcCHHHHhcCcccCCCCCcc
Confidence 9999999999999999999999999765433
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=2.7e-26 Score=211.28 Aligned_cols=166 Identities=23% Similarity=0.220 Sum_probs=122.3
Q ss_pred eeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccC---------------chhhHHHHHHHHHHHHHhcCCCCeeEE
Q 008127 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI---------------LPIAVEDVKREVKILQALAGHENVVKF 162 (577)
Q Consensus 98 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---------------~~~~~~~~~~E~~~l~~l~~hpniv~~ 162 (577)
|.++++||+|+||.||+|.+. +|+.||||++...... .........+|...+.++. |++++..
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~v~~~ 79 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPKV 79 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCCE
T ss_pred chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc-CCCcceE
Confidence 468899999999999999874 7899999987532110 0112344567889999994 9999988
Q ss_pred EEEEEcCCeEEEEEeccCCCchhHHHHHHhhhhhhhhhHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCceeccCCC
Q 008127 163 YNAFEDDNYVYIAMELCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 242 (577)
Q Consensus 163 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~LH~~~iiHrDlKp 242 (577)
+++.. .++||||++++.+. .++...+..++.|++.+|.|||++||+||||||
T Consensus 80 ~~~~~----~~lvme~~~~~~~~------------------------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP 131 (191)
T d1zara2 80 YAWEG----NAVLMELIDAKELY------------------------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQ 131 (191)
T ss_dssp EEEET----TEEEEECCCCEEGG------------------------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCST
T ss_pred EEecC----CEEEEEeecccccc------------------------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCCh
Confidence 76532 27999999876542 234555678999999999999999999999999
Q ss_pred CcEEeecCCCCCCeeEEecCCCcccCCCCCccccccCCcccc------chhcccCCCCCCchhhHHHH
Q 008127 243 ENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA------PEVLKRKSGPESDVWSIGVI 304 (577)
Q Consensus 243 ~NILl~~~~~~~~vkl~DFGla~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~~DiwSlG~i 304 (577)
+|||++ +..++|+|||+|........ ..|.. .+.+...++.++|+||+.--
T Consensus 132 ~NILv~----~~~~~liDFG~a~~~~~~~~-------~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~ 188 (191)
T d1zara2 132 YNVLVS----EEGIWIIDFPQSVEVGEEGW-------REILERDVRNIITYFSRTYRTEKDINSAIDR 188 (191)
T ss_dssp TSEEEE----TTEEEECCCTTCEETTSTTH-------HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred hheeee----CCCEEEEECCCcccCCCCCc-------HHHHHHHHHHHHHHHcCCCCCcccHHHHHHH
Confidence 999998 34599999999976542211 11211 23345677899999997543
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.87 E-value=1.6e-22 Score=177.28 Aligned_cols=138 Identities=29% Similarity=0.534 Sum_probs=122.2
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 491 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~ 491 (577)
.++++++++|+++|..+|+|++|+|+.+||..++.. .+..+++..+..++..+|.+++|.|+|+||+..+.......
T Consensus 2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~-- 78 (146)
T d1exra_ 2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQ-- 78 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHH--
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHh-cCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhcc--
Confidence 468899999999999999999999999999999954 78899999999999999999999999999998765332211
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 492 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
.....++.+|+.+|+|++|+|+.+||+.++...+ +++++|+.+|.|+||+|+|+||+++|.
T Consensus 79 ---~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~ 145 (146)
T d1exra_ 79 ---DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 145 (146)
T ss_dssp ---HHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred ---ChHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence 1134688899999999999999999999998776 589999999999999999999999985
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.86 E-value=3e-22 Score=178.79 Aligned_cols=143 Identities=28% Similarity=0.476 Sum_probs=124.7
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 491 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~ 491 (577)
.++++++++|+++|..+|+|++|+|+.+||..+|. .++..+++..+..++..+|.+++|.|+|.||+..+...... .
T Consensus 13 ~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~--~ 89 (162)
T d1topa_ 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR-MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE--D 89 (162)
T ss_dssp HSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHH--H
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHh-ccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhh--h
Confidence 46789999999999999999999999999999995 58999999999999999999999999999998766533221 1
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 492 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
....+...++.+|+.+|.|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+++|.++
T Consensus 90 ~~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 161 (162)
T d1topa_ 90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred cccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHcC
Confidence 1222345678899999999999999999999998776 48999999999999999999999999875
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.86 E-value=2.5e-22 Score=174.87 Aligned_cols=133 Identities=20% Similarity=0.393 Sum_probs=115.8
Q ss_pred cchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccc
Q 008127 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 492 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~ 492 (577)
++++++++++++|..+|.|++|.|+..||..+| +.+|..+++.++..++. +++|.|+|+||+.++... +....
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l-~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~--~~~~~ 73 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAIS-EQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDK--LSGTD 73 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHH-HHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHH--TCSCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHH-HHhhcCCCHHHHHHHHH----hccCcccccccccccccc--ccccc
Confidence 478899999999999999999999999999999 45899999999998885 578999999999877643 22222
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
. ...++.+|+.||+|++|+|+.+||+.++..+| +++++|+.+|.| +|+|+|+||+++|++
T Consensus 74 ~---~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~ 139 (142)
T d1wdcb_ 74 S---EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG 139 (142)
T ss_dssp C---HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred h---hhhHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhc
Confidence 2 23688899999999999999999999998777 589999999998 699999999999986
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.86 E-value=9.5e-22 Score=174.29 Aligned_cols=146 Identities=26% Similarity=0.468 Sum_probs=124.0
Q ss_pred hccccchHHHhhhccccccccCCC-CCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 487 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~-dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~ 487 (577)
....++++++++++++|..||.|+ ||.|+..||..+|+ .+|..+++.++..++..++.+++|.+++++|...+.....
T Consensus 4 ~~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (156)
T d1dtla_ 4 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMR-MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 82 (156)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC
T ss_pred HHHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHH-HcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhccc
Confidence 345788999999999999999995 89999999999995 5999999999999999999999999999999876543322
Q ss_pred hcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 488 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 488 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
.... ......++.+|+.||.|++|+|+.+||+.++...+ ++..+|+.+|.|+||.|+|+||+++|+++
T Consensus 83 ~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g~ 156 (156)
T d1dtla_ 83 DDSK--GKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 156 (156)
T ss_dssp -------CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred cccc--ccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcCC
Confidence 1111 11234688899999999999999999999998877 58999999999999999999999999874
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.86 E-value=3e-22 Score=175.46 Aligned_cols=139 Identities=30% Similarity=0.505 Sum_probs=122.5
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++++++++|+++|+.+|.|++|+|+.+||..++.. .|..+++..+..++..++.++++.++|++|+..+........
T Consensus 2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (146)
T d1lkja_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRS-LGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSND 80 (146)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh-cCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhcccc
Confidence 4678999999999999999999999999999999954 799999999999999999999999999999986654322211
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
....++.||+.||+|++|+|+.+||+.++...| ++..+|+.+| |+||+|+|+||+++|.+
T Consensus 81 -----~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~k 146 (146)
T d1lkja_ 81 -----SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 146 (146)
T ss_dssp -----HHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHCC
T ss_pred -----HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHhCC
Confidence 124688899999999999999999999998777 5899999999 99999999999999863
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.85 E-value=7.4e-22 Score=170.16 Aligned_cols=129 Identities=26% Similarity=0.383 Sum_probs=113.3
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHH
Q 008127 422 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 501 (577)
Q Consensus 422 ~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~ 501 (577)
..+|+.+|.|+||.|+..||..++. .++..+++.+++.+|..+|.+++|.|+|+||+.++..... .........++
T Consensus 3 e~~F~~~D~d~dG~is~~E~~~~l~-~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~---~~~~~~~~~~~ 78 (134)
T d1jfja_ 3 EALFKEIDVNGDGAVSYEEVKAFVS-KKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQG---QDLSDDKIGLK 78 (134)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHH-TTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSC---CSSHHHHHHHH
T ss_pred HHHHHHHcCCCcCCCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhhhcccccccccccccccccccc---ccccccccccc
Confidence 5689999999999999999999994 5899999999999999999999999999999987653222 22233345688
Q ss_pred HHHhhcCCCCCCcccHHHHhhhhcCcC--cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008127 502 AAFEKFDIDRDGFITPEELRMHTGLKG--SIDPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 502 ~~F~~~D~d~~G~I~~~El~~~l~~~~--~~~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
.+|+.+|.|++|+|+.+|++.++...+ .+.++|+.+|.|+||+|+|+||+++|
T Consensus 79 ~~F~~~D~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~D~d~dG~is~~EF~~~~ 133 (134)
T d1jfja_ 79 VLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHHHCCSSSSEEEHHHHHHHHTTTTCHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred ccccccccccCCcccHHHHHHHHHhcCcHHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence 999999999999999999999998887 48889999999999999999999987
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.85 E-value=8.7e-22 Score=172.23 Aligned_cols=134 Identities=16% Similarity=0.268 Sum_probs=113.1
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC--CCcceehhhHHHHHhhhhhhcccccHH
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLEEHDSEK 495 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d--~dg~i~f~EF~~~~~~~~~~~~~~~~~ 495 (577)
.++|+++|..||.|++|+|+.+||..+| +.+|..++..++..++..++.+ ++|.|+|+||+..+..........
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l-~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~--- 78 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIA-RALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQG--- 78 (145)
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHH-HHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccc---
Confidence 4678999999999999999999999999 5589999999999999988765 688999999998775433222111
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 496 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 496 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
....++.+|+.||+|++|+|+.+||+.++...| +++.+++. |.|+||+|+|+||+++|..
T Consensus 79 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dG~I~y~eF~~~ll~ 144 (145)
T d2mysc_ 79 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 144 (145)
T ss_pred hHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh-cCCCCCeEEHHHHHHHHhc
Confidence 124688899999999999999999999998877 48888874 8899999999999998864
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=2.1e-21 Score=168.89 Aligned_cols=135 Identities=27% Similarity=0.478 Sum_probs=119.6
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccccc
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 493 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~ 493 (577)
++++.++|+++|..+|+|++|+|+..||..++. .+|..++...+..++..+|.+++|.|+|+||+..+......
T Consensus 1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~----- 74 (141)
T d2obha1 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMR-ALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSE----- 74 (141)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHH-hcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhh-----
Confidence 357888999999999999999999999999995 58999999999999999999999999999999876543221
Q ss_pred HHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008127 494 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 494 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
......++.+|+.+|.+++|+|+.+||+.++...| ++..+|+.+|.|+||+|+|+||+++|
T Consensus 75 ~~~~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m 141 (141)
T d2obha1 75 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (141)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred hccHHHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence 11234688999999999999999999999998777 49999999999999999999999986
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.84 E-value=1.2e-21 Score=172.67 Aligned_cols=138 Identities=22% Similarity=0.401 Sum_probs=116.7
Q ss_pred cchHHHhhhccccccccC--CCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 413 LDDEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~--d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
++++++++++++|..||. |++|+|+..||..+| +.+|..+++.++..+. ..|.+++|.|+|+||+.++........
T Consensus 1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l-~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~ 78 (152)
T d1wdcc_ 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVC-RCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQ 78 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHH-HHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHH-HHhccCccHhhhhhhh-hhhccccccccccccccccccccccch
Confidence 467899999999999995 899999999999999 5699999999998764 568889999999999987764332221
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCC--CCCcccHHHHHHHHhh
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADID--KDGRISLSEFRRLLRT 556 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d--~dG~i~~~EF~~~l~~ 556 (577)
. . ...++.+|+.||+|++|+|+.+||+.++...| +++++++.+|.+ ++|+|+|+||++.|..
T Consensus 79 ~-~---~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~ 148 (152)
T d1wdcc_ 79 G-T---FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148 (152)
T ss_dssp C-C---HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred h-H---HHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhc
Confidence 1 1 23678899999999999999999999998877 599999999865 5689999999999875
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.83 E-value=1.8e-21 Score=168.92 Aligned_cols=130 Identities=20% Similarity=0.308 Sum_probs=110.2
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHH
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 497 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~ 497 (577)
..+++++|..||.|++|+|+..||..+| +.+|..+++.++..+ +.+.+|.|+|+||+.++........... .
T Consensus 4 ~~~fke~F~~~D~d~dG~I~~~el~~~l-~~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~---~ 75 (140)
T d1ggwa_ 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLL-RACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGD---P 75 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHH-HHTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCC---H
T ss_pred HHHHHHHHHHHCCCCCCeECHHHHHHHH-HHHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhH---H
Confidence 3689999999999999999999999999 569999999887654 6688999999999987754332222222 2
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++++|+.||+|++|+|+.+||+.+|...| +++++++.+|.| ||+|+|+||+++|..
T Consensus 76 ~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s 139 (140)
T d1ggwa_ 76 EEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred HHHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHhc
Confidence 3688899999999999999999999998766 599999999998 999999999999863
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.83 E-value=1.9e-21 Score=176.74 Aligned_cols=141 Identities=34% Similarity=0.630 Sum_probs=124.2
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++++++++|+++|+.+|.|++|+|+.+||..+|. .++..+++.+++.+++.+|.+++|.|+|++|+.++........
T Consensus 2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~-~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 80 (182)
T d1s6ia_ 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER 80 (182)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHT-TTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHH-HcCCccccccchhhhhhhhccccccchHHHHHHHHHhhccccc
Confidence 457888999999999999999999999999999994 5899999999999999999999999999999986654333222
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
. ..++.+|+.+|.+++|+|+.+||+.++...+ +++.+|+.+|.|+||+|+|+||+++|+...
T Consensus 81 ~------e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~~ 146 (182)
T d1s6ia_ 81 E------ENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRK 146 (182)
T ss_dssp C------CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred H------HHHHHHHHHHhhcCCCccchhhhhhhhhhcCccHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhCc
Confidence 1 1467799999999999999999999998766 599999999999999999999999998643
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.82 E-value=2.2e-21 Score=169.80 Aligned_cols=136 Identities=18% Similarity=0.261 Sum_probs=111.7
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHh-hcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA-IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~-~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
.++++|..+|.|++|+|+.+||..+|. .+|..+++++++.++.. .+.+.+|.|+|+||+.++................
T Consensus 3 ~~k~~F~~~D~d~~G~I~~~el~~~l~-~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~ 81 (146)
T d1m45a_ 3 ANKDIFTLFDKKGQGAIAKDSLGDYLR-AIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTE 81 (146)
T ss_dssp CCTTCHHHHCTTCCSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTH
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHH-HcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHH
Confidence 578999999999999999999999994 58999999999999975 5566789999999998775433222111111123
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.+..+|+.||++++|+|+.+||+.++...| ++..+|..+|.|+||+|+|+||+.+|..
T Consensus 82 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~ 145 (146)
T d1m45a_ 82 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 145 (146)
T ss_dssp HHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 688899999999999999999999998776 5899999999999999999999988753
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.82 E-value=7e-21 Score=166.31 Aligned_cols=135 Identities=19% Similarity=0.285 Sum_probs=112.7
Q ss_pred cchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccc
Q 008127 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 492 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~ 492 (577)
|+++++.+++++|..+|.|++|+|+..||..+| +.+|..++..+ ++..++.+++|.|+|+||+..+...... ..
T Consensus 1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l-~~lg~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~~~~--~~ 74 (145)
T d2mysb_ 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETF-AAMGRLNVKNE---ELDAMIKEASGPINFTVFLTMFGEKLKG--AD 74 (145)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HHhCCCcchHH---HHHHHHHhccCceeechhhhhhhhcccc--cc
Confidence 578899999999999999999999999999999 45887655443 3445566789999999999876542221 11
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
. ...++.+|+.||++++|+|+.+||+.++...| ++.++++.+|.|+||+|+|.||+++|..
T Consensus 75 ~---~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~ 141 (145)
T d2mysb_ 75 P---EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 141 (145)
T ss_pred h---HHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence 1 23688899999999999999999999998777 4899999999999999999999999964
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=3.8e-21 Score=171.95 Aligned_cols=143 Identities=29% Similarity=0.469 Sum_probs=118.5
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~ 488 (577)
|.+.|+++++++|+++|+.+|+|++|+|+.+||..++.. +.. +.++.+|..+|.+++|.|+|+||+..+......
T Consensus 6 ~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~--~~~---~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~ 80 (165)
T d1auib_ 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPEL--QQN---PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVK 80 (165)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHH--HTC---TTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTT
T ss_pred HcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhc--cCC---HHHHHHHHHHccccchhhhhhhhhhhccccccc
Confidence 668899999999999999999999999999999887643 222 356789999999999999999999877543221
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-----------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
. . ....++.+|+.+|.|++|+|+.+|++.++.... .+..+|..+|.|+||+|+|+||+++|.+.
T Consensus 81 ~--~---~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~~ 155 (165)
T d1auib_ 81 G--D---KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 155 (165)
T ss_dssp C--C---HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGGG
T ss_pred h--h---hHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhcC
Confidence 1 1 134688899999999999999999998875431 27789999999999999999999999976
Q ss_pred ccCC
Q 008127 558 SISS 561 (577)
Q Consensus 558 ~~~~ 561 (577)
.+..
T Consensus 156 ~~~~ 159 (165)
T d1auib_ 156 DIHK 159 (165)
T ss_dssp CGGG
T ss_pred Chhh
Confidence 6543
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.80 E-value=5.9e-20 Score=166.71 Aligned_cols=126 Identities=25% Similarity=0.382 Sum_probs=113.7
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHH
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 496 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~ 496 (577)
+.++|+++|+.+|.|++|+|+..||..+| +.+|..+++.+++.+++.+|.|++|.|+|+||...+..
T Consensus 16 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l-~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~------------ 82 (182)
T d1y1xa_ 16 DNQELMEWFRAVDTDGSGAISVPELNAAL-SSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF------------ 82 (182)
T ss_dssp TTSCHHHHHHHHCTTCSSSBCHHHHHHHH-CBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH------------
T ss_pred cHHHHHHHHHHHcCCCcCCCCHHHHHHHH-HHhcccCchhhhhhhhcccccccccccccccccccccc------------
Confidence 34689999999999999999999999999 45899999999999999999999999999999875532
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
...+..+|+.+|.+++|+|+.+||+.++...| +++.+|+.+|.|+||.|+|+||+.++.
T Consensus 83 ~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~ 147 (182)
T d1y1xa_ 83 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI 147 (182)
T ss_dssp HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred ccccccchhccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHH
Confidence 12567799999999999999999999998877 489999999999999999999999874
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=1.6e-20 Score=162.81 Aligned_cols=130 Identities=20% Similarity=0.311 Sum_probs=107.5
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcC--CCCcceehhhHHHHHhhhhhhcccccHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC--NTDGLVDFSEFVAATLHVHQLEEHDSEKWH 497 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~--d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~ 497 (577)
+|+++|..||.|++|.|+.+||..+| +.+|..+++.++..++..++. +++|.|+|.||...+.......... ..
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l-~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~---~~ 76 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVM-RALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQG---TY 76 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHH-HHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC----------
T ss_pred CHHHHHHHHhCCCCCeECHHHHHHHH-HHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhcccc---HH
Confidence 47889999999999999999999999 569999999999999988874 5799999999998765432221111 12
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
..++.+|+.+|+|++|+|+.+||+.++...| +++.++. .|.|+||+|+|+||+++|
T Consensus 77 ~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~-~~~d~dg~I~~~eF~~~l 138 (139)
T d1w7jb1 77 EDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDSNGCINYEAFLKHI 138 (139)
T ss_dssp -CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHT-TCCCTTSEEEHHHHHHHT
T ss_pred HHHHHhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHh-hCCCCCCeEeHHHHHHHh
Confidence 3577899999999999999999999998877 4777776 588999999999999976
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=99.78 E-value=6.6e-19 Score=160.99 Aligned_cols=164 Identities=18% Similarity=0.299 Sum_probs=126.2
Q ss_pred ccc-chHHHhhhccccccccCCCCCCCCHHHHHHHHH----hhCCCCccHHHHHHH-----HHhhcCCCCcceehhhHHH
Q 008127 411 STL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALA----KDLPWKLKESRVLEI-----LQAIDCNTDGLVDFSEFVA 480 (577)
Q Consensus 411 ~~~-~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~----~~~~~~~~~~~~~~~-----~~~~D~d~dg~i~f~EF~~ 480 (577)
+.| .++.+++++.+|..+|.|++|+|+.+||..++. +.+|..++..++..+ +...+.+.++.|+++||+.
T Consensus 5 ~~f~~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~ 84 (189)
T d1qv0a_ 5 TDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLD 84 (189)
T ss_dssp CCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHH
Confidence 445 567889999999999999999999999987643 346777776665443 4455677899999999998
Q ss_pred HHhhhhhhc-----ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHH
Q 008127 481 ATLHVHQLE-----EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSE 549 (577)
Q Consensus 481 ~~~~~~~~~-----~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~E 549 (577)
++....... ..........+..+|+.+|+|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~E 164 (189)
T d1qv0a_ 85 GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 164 (189)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHH
T ss_pred HHHHHHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence 775432211 111222334677899999999999999999999998776 489999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCCCCCCCC
Q 008127 550 FRRLLRTASISSRNVPPSPSGHRNP 574 (577)
Q Consensus 550 F~~~l~~~~~~~~~~~~~~~~~~~~ 574 (577)
|++++.+...+.++.++|-.|-+=|
T Consensus 165 F~~~~~~~~~~~d~~~~g~~~~~~~ 189 (189)
T d1qv0a_ 165 MTRQHLGFWYTLDPEADGLYGNGVP 189 (189)
T ss_dssp HHHHHHHHHTTCCGGGTTTTTTSCC
T ss_pred HHHHHHHhCCCCCCCCCCcCCCCCC
Confidence 9999999999999999987766544
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.77 E-value=4.8e-19 Score=163.58 Aligned_cols=138 Identities=20% Similarity=0.270 Sum_probs=113.0
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
+.|+..++..+.+.|. +.+++|.|+.+||..+|....+...+...++.+|+.+|.|++|.|+|.||+.++........
T Consensus 20 t~f~~~ei~~l~~~F~--~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~ 97 (201)
T d1omra_ 20 TKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT 97 (201)
T ss_dssp CSSCHHHHHHHHHHHH--HHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCG
T ss_pred CCCCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch
Confidence 5688889998888884 56679999999999999765555566778899999999999999999999987764432221
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC--------------------cHHHHHHHhCCCCCCcccHHHH
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--------------------SIDPLLEEADIDKDGRISLSEF 550 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--------------------~~~~~~~~~D~d~dG~i~~~EF 550 (577)
. ..++.+|+.||.|++|+|+.+|+..++.... .++.+|+.+|.|+||+|+|+||
T Consensus 98 ---~---~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF 171 (201)
T d1omra_ 98 ---N---QKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEF 171 (201)
T ss_dssp ---G---GSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHH
T ss_pred ---H---HHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHH
Confidence 1 2577899999999999999999987765321 1678999999999999999999
Q ss_pred HHHHhh
Q 008127 551 RRLLRT 556 (577)
Q Consensus 551 ~~~l~~ 556 (577)
+.++..
T Consensus 172 ~~~~~~ 177 (201)
T d1omra_ 172 IEGTLA 177 (201)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998764
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.77 E-value=3.6e-19 Score=162.65 Aligned_cols=136 Identities=26% Similarity=0.323 Sum_probs=111.5
Q ss_pred chHHHhhhccccccccCC-CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccc
Q 008127 414 DDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 492 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d-~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~ 492 (577)
+....++|+++|+.|+.+ ++|+|+.+||..+| ...+...+...++.+|+.+|.|+||.|+|.||+.++.......
T Consensus 16 ~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l-~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~--- 91 (189)
T d1jbaa_ 16 GAADAAQLQEWYKKFLEECPSGTLFMHEFKRFF-KVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT--- 91 (189)
T ss_dssp CHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHH-HCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCC---
T ss_pred CccCHHHHHHHHHHhcccCCCCeeeHHHHHHHH-HHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccc---
Confidence 444556677777777655 59999999999999 4588888899999999999999999999999998776543221
Q ss_pred cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-----------------------cHHHHHHHhCCCCCCcccHHH
Q 008127 493 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------------------SIDPLLEEADIDKDGRISLSE 549 (577)
Q Consensus 493 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------------------~~~~~~~~~D~d~dG~i~~~E 549 (577)
.+ ..++.+|+.||.|++|.|+.+|+..++.... .++.+|+.+|.|+||+|+|+|
T Consensus 92 ~~---~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~E 168 (189)
T d1jbaa_ 92 LE---HKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNE 168 (189)
T ss_dssp CT---HHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHH
T ss_pred hH---HHHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHH
Confidence 11 3677899999999999999999987664321 267899999999999999999
Q ss_pred HHHHHhh
Q 008127 550 FRRLLRT 556 (577)
Q Consensus 550 F~~~l~~ 556 (577)
|+.+++.
T Consensus 169 F~~~~~~ 175 (189)
T d1jbaa_ 169 FVEGARR 175 (189)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999975
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.77 E-value=4.4e-19 Score=161.22 Aligned_cols=140 Identities=26% Similarity=0.401 Sum_probs=115.5
Q ss_pred ccccchHHHhhhccccccccCC--CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhh
Q 008127 410 ASTLDDEELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 487 (577)
Q Consensus 410 ~~~~~~~~~~~l~~~F~~~D~d--~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~ 487 (577)
.+.|+.+++..|+++|..+|.+ ++|+|+.+||..++. ..+..+. ..++.+|+.+|.|++|.|+|.||+.++.....
T Consensus 8 ~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~-~~~~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~ 85 (183)
T d2zfda1 8 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALF-KTNKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHP 85 (183)
T ss_dssp HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHH-SCSSCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTST
T ss_pred hCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHH-hcCCCCC-HHHHHHHHHHccCCCCcCcHHHHHHHHHhhhc
Confidence 4789999999999999999876 699999999999984 3555544 47899999999999999999999987654322
Q ss_pred hcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc----C----------cHHHHHHHhCCCCCCcccHHHHHHH
Q 008127 488 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G----------SIDPLLEEADIDKDGRISLSEFRRL 553 (577)
Q Consensus 488 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~----------~~~~~~~~~D~d~dG~i~~~EF~~~ 553 (577)
.. .. ...++.+|+.||.|++|+|+.+|++.++... + .+..+|+.+|.|+||.|+|+||..+
T Consensus 86 ~~--~~---~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~ 160 (183)
T d2zfda1 86 NA--PI---DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSL 160 (183)
T ss_dssp TS--CH---HHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHH
T ss_pred cC--cH---HHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence 11 11 2367889999999999999999999876432 1 1677899999999999999999999
Q ss_pred Hhh
Q 008127 554 LRT 556 (577)
Q Consensus 554 l~~ 556 (577)
+..
T Consensus 161 ~~~ 163 (183)
T d2zfda1 161 VLR 163 (183)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.77 E-value=2.7e-19 Score=162.13 Aligned_cols=128 Identities=27% Similarity=0.388 Sum_probs=111.6
Q ss_pred HHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccH
Q 008127 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 494 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~ 494 (577)
.+.+.|..+|+.+|.|++|+|+.+||..+|.. ++. ..+.+++..+++.+|.|++|.|+|+||+.++...
T Consensus 16 ~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~-~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~--------- 85 (181)
T d1hqva_ 16 PDQSFLWNVFQRVDKDRSGVISDNELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI--------- 85 (181)
T ss_dssp SCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCC-SSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH---------
T ss_pred ccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH-cCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc---------
Confidence 34577999999999999999999999999954 554 4688999999999999999999999999866432
Q ss_pred HHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 495 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 495 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.+|++++|+|+.+||+.++...+ +++.+++.+|.+++|+|+|+||+.++..
T Consensus 86 ---~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~ 150 (181)
T d1hqva_ 86 ---TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV 150 (181)
T ss_dssp ---HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred ---cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 2466799999999999999999999987666 4899999999999999999999988743
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.77 E-value=5.1e-19 Score=160.56 Aligned_cols=139 Identities=22% Similarity=0.398 Sum_probs=114.2
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
+.++.++++.+.+.|. +.+++|+|+..||..+|....+.......++++|+.+|.+++|.|+|+||+..+.......
T Consensus 16 t~fs~~ei~~l~~~F~--~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~- 92 (181)
T d1bjfa_ 16 TDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGK- 92 (181)
T ss_dssp SSCCHHHHHHHHHHHH--HHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSC-
T ss_pred cCCCHHHHHHHHHHHH--hhCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhc-
Confidence 5688899999988885 4578999999999999965434444567789999999999999999999998776543211
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR 552 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------------~~~~~~~~~D~d~dG~i~~~EF~~ 552 (577)
. ...++.+|+.+|.|++|+|+.+|+..++.... .++.+|+.+|.|+||.|||+||++
T Consensus 93 --~---~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~ 167 (181)
T d1bjfa_ 93 --L---EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 167 (181)
T ss_dssp --H---HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHH
T ss_pred --h---HHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 1 23678899999999999999999998775321 278899999999999999999999
Q ss_pred HHhhc
Q 008127 553 LLRTA 557 (577)
Q Consensus 553 ~l~~~ 557 (577)
++.+.
T Consensus 168 ~~~~~ 172 (181)
T d1bjfa_ 168 GAKSD 172 (181)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99753
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.75 E-value=8.3e-19 Score=160.31 Aligned_cols=138 Identities=21% Similarity=0.355 Sum_probs=113.7
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
+.|++.++..+.+.|. +.+++|.|+..||..++....+.......++.+|..+|.+++|.|+|.||+.++......
T Consensus 20 t~fs~~Ei~~l~~~F~--~~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~-- 95 (190)
T d1fpwa_ 20 TYFDRREIQQWHKGFL--RDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRG-- 95 (190)
T ss_dssp CCSTHHHHHHHHHHHH--HHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCC--
T ss_pred cCCCHHHHHHHHHHHH--HHCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccC--
Confidence 4588889999888884 566789999999999996655555556678999999999999999999999877644321
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR 552 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------------~~~~~~~~~D~d~dG~i~~~EF~~ 552 (577)
.. ...++.+|+.||.|++|.|+.+|+..++.... .++.+|+.+|.|+||.|+|+||+.
T Consensus 96 -~~---~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~ 171 (190)
T d1fpwa_ 96 -TL---EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFRE 171 (190)
T ss_dssp -CS---THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHH
T ss_pred -ch---HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 11 13678899999999999999999998774321 278899999999999999999999
Q ss_pred HHhh
Q 008127 553 LLRT 556 (577)
Q Consensus 553 ~l~~ 556 (577)
++.+
T Consensus 172 ~~~~ 175 (190)
T d1fpwa_ 172 GSKV 175 (190)
T ss_dssp HHHS
T ss_pred HHHH
Confidence 9876
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=1.3e-18 Score=158.74 Aligned_cols=139 Identities=21% Similarity=0.329 Sum_probs=113.8
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
+.++..++..|.+.|.. .+++|.|+..+|..++....+.......++.+|+.+|.+++|.|+|.||+.++......
T Consensus 17 t~fs~~Ei~~l~~~F~~--~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~-- 92 (187)
T d1g8ia_ 17 TYFTEKEVQQWYKGFIK--DCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRG-- 92 (187)
T ss_dssp SSSCHHHHHHHHHHHHH--HCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHC--
T ss_pred cCCCHHHHHHHHHHHHH--HCCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccC--
Confidence 45788888888888864 45789999999999997655555556777899999999999999999999877654321
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR 552 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------------~~~~~~~~~D~d~dG~i~~~EF~~ 552 (577)
.. ...++.+|+.||.|++|+|+.+|+..++.... .++.+|+.+|.|+||+|+|+||++
T Consensus 93 -~~---~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~ 168 (187)
T d1g8ia_ 93 -TL---DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQE 168 (187)
T ss_dssp -CH---HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHH
T ss_pred -ch---hhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 11 23688899999999999999999998775321 278899999999999999999999
Q ss_pred HHhhc
Q 008127 553 LLRTA 557 (577)
Q Consensus 553 ~l~~~ 557 (577)
++...
T Consensus 169 ~~~~~ 173 (187)
T d1g8ia_ 169 GSKAD 173 (187)
T ss_dssp HHHHC
T ss_pred HHHHC
Confidence 98763
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.75 E-value=1.4e-18 Score=158.09 Aligned_cols=151 Identities=17% Similarity=0.216 Sum_probs=117.3
Q ss_pred cchHHHhhhcccccc-ccCCCCCCCCHHHHHHHHHhhC---CCCcc-----------HHHHHHHHHhhcCCCCcceehhh
Q 008127 413 LDDEELADLRDQFDA-IDVDKNGSISLEEMRQALAKDL---PWKLK-----------ESRVLEILQAIDCNTDGLVDFSE 477 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~-~D~d~dG~i~~~el~~~l~~~~---~~~~~-----------~~~~~~~~~~~D~d~dg~i~f~E 477 (577)
+++.+.++++++|+. +|.|+||+|+.+||..++.+.. ..... ......++...|.+++|.|++++
T Consensus 2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~ 81 (185)
T d2sasa_ 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence 567888999999997 5999999999999999885421 11111 12234567788999999999999
Q ss_pred HHHHHhhhhhhcc---cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHH
Q 008127 478 FVAATLHVHQLEE---HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEF 550 (577)
Q Consensus 478 F~~~~~~~~~~~~---~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF 550 (577)
|..++........ .........+..+|+.+|+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~~~~~~~~f~~~D~d~dG~i~~~EF 161 (185)
T d2sasa_ 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRY 161 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHHH
T ss_pred hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCCHHHHHHHHHHcCCCCCCCCcHHHH
Confidence 9987754332211 11112234578899999999999999999999998776 6999999999999999999999
Q ss_pred HHHHhhcccCCCC
Q 008127 551 RRLLRTASISSRN 563 (577)
Q Consensus 551 ~~~l~~~~~~~~~ 563 (577)
+.++.....+.+.
T Consensus 162 ~~~~~~f~~~~~~ 174 (185)
T d2sasa_ 162 KELYYRLLTSPAA 174 (185)
T ss_dssp HHHHHHHHHCSSC
T ss_pred HHHHHHHhcCCCC
Confidence 9999886655544
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.73 E-value=7e-19 Score=159.54 Aligned_cols=131 Identities=21% Similarity=0.369 Sum_probs=93.3
Q ss_pred ccchHHHh-hhccccccccCCCCCCCCHHHHHHHHHhhCCCC--------ccHHHHHHHHHhhcCCCCcceehhhHHHHH
Q 008127 412 TLDDEELA-DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK--------LKESRVLEILQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 412 ~~~~~~~~-~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~--------~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~ 482 (577)
.++++++. .++++|+.+| ++||.|+..||+.+|.. .+.. ++.+.++.++..+|.|++|.|+|+||..++
T Consensus 12 ~ls~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~-~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~ 89 (188)
T d1qxpa2 12 VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNR-IISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILW 89 (188)
T ss_dssp ---------------CCCC-CSSSSCCCSCTTTTTCC----------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHH-hCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 34566654 5999999999 55899999999998843 3332 456789999999999999999999999766
Q ss_pred hhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 483 LHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
... ..++.+|+.||+|++|+|+..||+.++...| ++.+++-..|.|+||.|+|+||+.+|..
T Consensus 90 ~~~------------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~~~~~dg~i~f~eFi~~~~~ 156 (188)
T d1qxpa2 90 NRI------------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR 156 (188)
T ss_dssp HHH------------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTSCSSSBCCHHHHHHHHHH
T ss_pred hhh------------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Confidence 432 2567799999999999999999999998877 3555555567899999999999987643
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.73 E-value=4.4e-18 Score=153.78 Aligned_cols=138 Identities=25% Similarity=0.368 Sum_probs=111.4
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
+.|+..+++.+.+.|. +.+++|.|+.+||..+|....+.......++.+|+.+|.|++|.|+|+||+.++.......
T Consensus 8 t~ft~~ei~~l~~~F~--~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~- 84 (178)
T d1s6ca_ 8 TNFTKRELQVLYRGFK--NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT- 84 (178)
T ss_dssp SSCCHHHHHHHHHHHH--HHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCC-
T ss_pred CCCCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccc-
Confidence 5678888888877775 4567899999999999976555555667789999999999999999999998775432211
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR 552 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------------~~~~~~~~~D~d~dG~i~~~EF~~ 552 (577)
. ...++.+|+.||.|++|.|+.+|+..++.... .++.+|+.+|.|+||.|||+||..
T Consensus 85 --~---~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~ 159 (178)
T d1s6ca_ 85 --V---HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE 159 (178)
T ss_dssp --H---HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred --h---HHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 1 23678899999999999999999987654221 267899999999999999999999
Q ss_pred HHhh
Q 008127 553 LLRT 556 (577)
Q Consensus 553 ~l~~ 556 (577)
++..
T Consensus 160 ~i~~ 163 (178)
T d1s6ca_ 160 SCQE 163 (178)
T ss_dssp HTTS
T ss_pred HHHH
Confidence 8765
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=99.73 E-value=3.4e-18 Score=153.90 Aligned_cols=150 Identities=17% Similarity=0.213 Sum_probs=112.4
Q ss_pred hHHHhhhccccccccCCCCCCCCHHHHHHHHHhh---CCCCccH-HH----HHHHHHh--hcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKD---LPWKLKE-SR----VLEILQA--IDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~---~~~~~~~-~~----~~~~~~~--~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..+++++.+|+.+|.|+||+|+.+||..++.+. .+..... .. ....+.. .+.+++|.|+++||+..+..
T Consensus 2 ~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~ 81 (174)
T d2scpa_ 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKE 81 (174)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHh
Confidence 4567899999999999999999999999988542 1222211 11 2222332 37788999999999987764
Q ss_pred hhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhcccC
Q 008127 485 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASIS 560 (577)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~~~ 560 (577)
...... ........+..+|+.+|+|++|+|+.+||+.++...+ ++..+|+.+|.|+||.|+|+||+.++.....+
T Consensus 82 ~~~~~~-~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~f~~~ 160 (174)
T d2scpa_ 82 MVKNPE-AKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFFMN 160 (174)
T ss_dssp HTSCGG-GTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCGGGHHHHHHHHCTTCSSEECHHHHHHHHHHHHHC
T ss_pred hhcchh-hHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhhhHHHHHHHhhcCCCCCCcEeHHHHHHHHHHHhhc
Confidence 332221 1222234578899999999999999999999887665 69999999999999999999999999876554
Q ss_pred CCCCCC
Q 008127 561 SRNVPP 566 (577)
Q Consensus 561 ~~~~~~ 566 (577)
++..|
T Consensus 161 -~~~~~ 165 (174)
T d2scpa_ 161 -DGDST 165 (174)
T ss_dssp -SSCCG
T ss_pred -CCccc
Confidence 44444
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.73 E-value=1.5e-18 Score=158.04 Aligned_cols=130 Identities=18% Similarity=0.306 Sum_probs=109.0
Q ss_pred cchHHH-hhhccccccccCCCCCCCCHHHHHHHHHhhCC--------CCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 413 LDDEEL-ADLRDQFDAIDVDKNGSISLEEMRQALAKDLP--------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 413 ~~~~~~-~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~--------~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
.+++++ +.++++|..+| |+||.|+..||..+|.. +| ...+.+.+..++..+|.|++|.|+|+||+..+.
T Consensus 11 ~~~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~-~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~ 88 (186)
T d1df0a1 11 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRR-VLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT 88 (186)
T ss_dssp CCCSCSCHHHHHHHHHHH-GGGTCEEHHHHHHHHHH-HHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH-hcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Confidence 344454 45899999998 99999999999999954 32 235678899999999999999999999987654
Q ss_pred hhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 484 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.. ..++.+|+.+|+|++|+|+.+||+.++...| ++.+++..+|.|+||.|+|+||+.+|..
T Consensus 89 ~~------------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~~~~~~~~~d~d~dg~I~f~eFi~~~~~ 154 (186)
T d1df0a1 89 KI------------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR 154 (186)
T ss_dssp HH------------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHHHHHHHHHHHCCSTTEECHHHHHHHHHH
T ss_pred hH------------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHHHHHHHHHHHcCCCCeEeHHHHHHHHHH
Confidence 32 2467799999999999999999999998776 4667777899999999999999988754
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=99.71 E-value=1.5e-17 Score=151.49 Aligned_cols=154 Identities=19% Similarity=0.255 Sum_probs=121.1
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHh----hCCCCccHHHHHHHHH-----hhcCCCCcceehhhHHHHHhh
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK----DLPWKLKESRVLEILQ-----AIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~----~~~~~~~~~~~~~~~~-----~~D~d~dg~i~f~EF~~~~~~ 484 (577)
++..+++++++|+.+|.|+||+|+.+||..++.. .+|..++..++...+. ......++.+++.+|+..+..
T Consensus 7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (187)
T d1uhka1 7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK 86 (187)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence 3566889999999999999999999999876643 4677777766555443 344566778999999876654
Q ss_pred hhhhc-----ccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHH
Q 008127 485 VHQLE-----EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRL 553 (577)
Q Consensus 485 ~~~~~-----~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~ 553 (577)
..... ..........+..+|+.+|+|++|+|+.+||+.++...+ +++.+|+.+|.|+||+|+|+||+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 166 (187)
T d1uhka1 87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ 166 (187)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHH
Confidence 32211 011122234578899999999999999999999998766 4899999999999999999999999
Q ss_pred HhhcccCCCCCCCC
Q 008127 554 LRTASISSRNVPPS 567 (577)
Q Consensus 554 l~~~~~~~~~~~~~ 567 (577)
+.+...+.++..++
T Consensus 167 ~~~~~~~~d~~~~~ 180 (187)
T d1uhka1 167 HLGFWYTMDPACEK 180 (187)
T ss_dssp HHHHHTTCCGGGTT
T ss_pred HHHhcccCCccccc
Confidence 99999998887766
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=6.1e-18 Score=149.83 Aligned_cols=119 Identities=19% Similarity=0.323 Sum_probs=100.4
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHhhCCCCc-----cHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHH
Q 008127 422 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKL-----KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 496 (577)
Q Consensus 422 ~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~-----~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~ 496 (577)
..+|+.+ .+.||.|+.+||+.+|.. .|..+ +.+.++.|+..+|.|++|.|+|+||+.++...
T Consensus 3 ~~~F~~~-a~~dG~I~~~EL~~~L~~-~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~----------- 69 (165)
T d1k94a_ 3 YTYFSAV-AGQDGEVDAEELQRCLTQ-SGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL----------- 69 (165)
T ss_dssp HHHHHHH-HGGGTSBCHHHHHHHHHH-HTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-----------
T ss_pred HHHHHHh-cCCCCCCCHHHHHHHHHH-cCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhcc-----------
Confidence 4566666 688999999999999954 56543 56889999999999999999999999766432
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.||+|++|+|+.+||+.++...| +++.++..+|. ||.|+|+||+.+|..
T Consensus 70 -~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~ 132 (165)
T d1k94a_ 70 -NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVK 132 (165)
T ss_dssp -HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHH
T ss_pred -chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHH
Confidence 2567799999999999999999999998887 48999999974 689999999987654
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.71 E-value=2.5e-18 Score=154.60 Aligned_cols=127 Identities=23% Similarity=0.338 Sum_probs=105.9
Q ss_pred HHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCC--------CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhh
Q 008127 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 487 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~--------~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~ 487 (577)
+++++++++|..+|. +||.|+..||..+|.. +|. ..+.+.+..++..+|.|++|.|+|+||+.++...
T Consensus 1 ee~~~~r~~F~~~d~-~dg~I~~~EL~~~L~~-~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~-- 76 (173)
T d1alva_ 1 EEVRQFRRLFAQLAG-DDMEVSATELMNILNK-VVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI-- 76 (173)
T ss_dssp CHHHHHHHHHHHHHG-GGTSBCHHHHHHHHHH-HHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH--
T ss_pred ChHHHHHHHHHHHcC-CCCcCCHHHHHHHHHH-hCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhh--
Confidence 467899999999994 5899999999999954 332 3567899999999999999999999998765321
Q ss_pred hcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 488 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 488 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.||+|++|.|+.+||+.+|...+ +..+.|..+|.|+||.|+|+||+.+|..
T Consensus 77 ----------~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~~~d~d~~G~i~~~EF~~~~~~ 140 (173)
T d1alva_ 77 ----------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVR 140 (173)
T ss_dssp ----------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHTCSSSCBCHHHHHHHHHH
T ss_pred ----------hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhhccccCCCCeEeHHHHHHHHHH
Confidence 2466799999999999999999999998776 2445566677799999999999998854
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=99.71 E-value=5e-18 Score=168.53 Aligned_cols=144 Identities=20% Similarity=0.295 Sum_probs=117.4
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++.++...++++|..+|.|++|.|+.+||..+|. .+|..+++.++..+|..+|.|++|.|+|.||+..+........
T Consensus 114 ~~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 192 (321)
T d1ij5a_ 114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLA-KYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVA 192 (321)
T ss_dssp CCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHH-HHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHH-HcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhH
Confidence 456778889999999999999999999999999995 4888899999999999999999999999999754422111000
Q ss_pred ---------------------------cc--------------------------cHHHHHHHHHHHhhcCCCCCCcccH
Q 008127 491 ---------------------------HD--------------------------SEKWHLRSQAAFEKFDIDRDGFITP 517 (577)
Q Consensus 491 ---------------------------~~--------------------------~~~~~~~~~~~F~~~D~d~~G~I~~ 517 (577)
.. .......+..+|..+|.|++|+|+.
T Consensus 193 ~F~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~ 272 (321)
T d1ij5a_ 193 DFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSK 272 (321)
T ss_dssp CHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEH
T ss_pred HHHHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcH
Confidence 00 0001223456899999999999999
Q ss_pred HHHhhhhcCcC-------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 518 EELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 518 ~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
.||+.++...+ ++..+|..+|.|+||.|+|+||+.+|.
T Consensus 273 ~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml 317 (321)
T d1ij5a_ 273 EEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL 317 (321)
T ss_dssp HHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 99999886554 589999999999999999999999985
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=1.1e-17 Score=150.20 Aligned_cols=126 Identities=19% Similarity=0.353 Sum_probs=99.9
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCC-----ccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK-----LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 488 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~-----~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~ 488 (577)
+.++...++..|+.+| ++||.|+..||+.+|.+ +|.. ++.+.+..+++.+|.|++|.|+|+||+.++...
T Consensus 2 p~~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~-~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~--- 76 (172)
T d1juoa_ 2 PGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL--- 76 (172)
T ss_dssp TTCCCCTTHHHHHHHH-TTTTEECHHHHHHHHHH-HTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH---
T ss_pred CcchHHHHHHHHHHhC-CCCCCCCHHHHHHHHHH-cCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhh---
Confidence 4456678999999997 88999999999999955 5544 457899999999999999999999999765421
Q ss_pred cccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 489 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 489 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
..+..+|+.+|+|++|+|+.+|++.++...+ ++..+++.+| .+|.|+|+||+.+|.
T Consensus 77 ---------~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d--~~g~i~~~eF~~~~~ 138 (172)
T d1juoa_ 77 ---------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACCV 138 (172)
T ss_dssp ---------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTC--SSSSEEHHHHHHHHH
T ss_pred ---------hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHH--hcCCcCHHHHHHHHH
Confidence 2456689999999999999999999987665 3666666664 346666666666554
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.68 E-value=9.7e-17 Score=144.27 Aligned_cols=147 Identities=16% Similarity=0.223 Sum_probs=114.2
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHh---hCCCCccHHHH-----------HHHHHhhcCCCCcceehhhHHHHH
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAK---DLPWKLKESRV-----------LEILQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~---~~~~~~~~~~~-----------~~~~~~~D~d~dg~i~f~EF~~~~ 482 (577)
..++|+++|+.+|.|++|.|+.+||..++.+ ..+..+...++ ..++...|.+++|.|++.++...+
T Consensus 5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (176)
T d1nyaa_ 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT 84 (176)
T ss_dssp HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 3467899999999999999999999999854 23433333222 446677789999999999999766
Q ss_pred hhhhhhccc--ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 483 LHVHQLEEH--DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 483 ~~~~~~~~~--~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
......... ........++.+|..+|+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 164 (176)
T d1nyaa_ 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164 (176)
T ss_dssp HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 543222111 1112234678899999999999999999999887665 5899999999999999999999999999
Q ss_pred cccCCCC
Q 008127 557 ASISSRN 563 (577)
Q Consensus 557 ~~~~~~~ 563 (577)
...+...
T Consensus 165 ~~~~~~d 171 (176)
T d1nyaa_ 165 FHFGRLD 171 (176)
T ss_dssp CSSSCSS
T ss_pred HhcCCCC
Confidence 8876644
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.67 E-value=8.2e-17 Score=131.45 Aligned_cols=94 Identities=30% Similarity=0.459 Sum_probs=77.4
Q ss_pred ccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc---C-
Q 008127 453 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---G- 528 (577)
Q Consensus 453 ~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~---~- 528 (577)
++.++|..++..+| ++|.|+|+||+.++.... . . ...++.+|+.||+|++|+|+.+||+.++... +
T Consensus 6 l~~eeI~~~~~~~d--~dG~idf~EF~~~~~~~~----~-~---~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~ 75 (109)
T d1pvaa_ 6 LKADDIKKALDAVK--AEGSFNHKKFFALVGLKA----M-S---ANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR 75 (109)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTCTT----S-C---HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCC
T ss_pred CCHHHHHHHHHhcC--CCCCCcHHHHHHHHHHcc----C-C---HHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCC
Confidence 45788888888775 568899999997764211 1 1 1367889999999999999999999988654 2
Q ss_pred -----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 529 -----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 529 -----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
+++++|+.+|.|+||+|+|+||+.+|.+
T Consensus 76 ~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 76 DLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 108 (109)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence 4889999999999999999999999975
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.3e-17 Score=150.51 Aligned_cols=137 Identities=25% Similarity=0.385 Sum_probs=105.4
Q ss_pred cccchHHHhhhccccccccCCCCCC--------CCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC-CCcceehhhHHHH
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGS--------ISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAA 481 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~--------i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d-~dg~i~f~EF~~~ 481 (577)
+.|+++++..+++.|..+|.+++|. ++.++|..... +..+ ..++++|+.+|.+ ++|.|+|+||+.+
T Consensus 9 T~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~~--l~~~---~~~~rif~~fd~~~~~g~I~f~EFv~~ 83 (180)
T d1xo5a_ 9 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPE--LKAN---PFKERICRVFSTSPAKDSLSFEDFLDL 83 (180)
T ss_dssp CCSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSHH--HHTC---TTHHHHHHHHCCSTTCCEECHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCcc--cccC---hHHHHHHHhccCCCCCCcCcHHHHHHH
Confidence 5789999999999999998888765 55555543321 1111 2467899999987 6999999999987
Q ss_pred HhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-----------c----HHHHHHHhCCCCCCccc
Q 008127 482 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------S----IDPLLEEADIDKDGRIS 546 (577)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~----~~~~~~~~D~d~dG~i~ 546 (577)
+........ . ..+++.+|+.||.|++|+|+.+|+..++..+. + ++.+|+.+|.|+||+||
T Consensus 84 l~~~~~~~~--~---~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is 158 (180)
T d1xo5a_ 84 LSVFSDTAT--P---DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTIN 158 (180)
T ss_dssp HHHHSTTSC--H---HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBC
T ss_pred HHHHhhcCC--H---HHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCc
Confidence 754322111 1 24788899999999999999999998775431 1 66789999999999999
Q ss_pred HHHHHHHHhhc
Q 008127 547 LSEFRRLLRTA 557 (577)
Q Consensus 547 ~~EF~~~l~~~ 557 (577)
|+||..++...
T Consensus 159 ~~EF~~~~~~~ 169 (180)
T d1xo5a_ 159 LSEFQHVISRS 169 (180)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999998753
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.64 E-value=1.9e-16 Score=129.28 Aligned_cols=95 Identities=27% Similarity=0.441 Sum_probs=77.6
Q ss_pred CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCc---C
Q 008127 452 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---G 528 (577)
Q Consensus 452 ~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~---~ 528 (577)
.+++++|.+++..+| .+|.|+|+||+.++.. . ...+ ..++.+|+.||+|++|+|+.+||+.++... |
T Consensus 5 ~l~~~di~~~~~~~~--~~G~idf~eF~~~~~~----~-~~~~---~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g 74 (109)
T d5pala_ 5 VLKADDINKAISAFK--DPGTFDYKRFFHLVGL----K-GKTD---AQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHG 74 (109)
T ss_dssp TSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC----T-TCCH---HHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTC
T ss_pred HccHHHHHHHHHhcC--CCCcCcHHHHHHHHHh----c-CCCH---HHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhcc
Confidence 356788999999887 4688999999976532 1 1111 368899999999999999999999887532 2
Q ss_pred ------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 529 ------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 529 ------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
+++++|+.+|.|+||+|+|+||+.+|.+
T Consensus 75 ~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d5pala_ 75 RDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 4999999999999999999999999975
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.58 E-value=3.4e-15 Score=121.36 Aligned_cols=94 Identities=28% Similarity=0.390 Sum_probs=78.2
Q ss_pred CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC---
Q 008127 452 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--- 528 (577)
Q Consensus 452 ~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--- 528 (577)
.+++.+|..++..++.+ |.|+|.||+..+.. ... . ...++.+|+.||+|++|+|+.+||+.++..++
T Consensus 4 gls~~di~~~~~~~~~~--gsi~~~eF~~~~~l----~~~-~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~ 73 (107)
T d2pvba_ 4 GLKDADVAAALAACSAA--DSFKHKEFFAKVGL----ASK-S---LDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSA 73 (107)
T ss_dssp TSCHHHHHHHHHHTCST--TCCCHHHHHHHHTG----GGS-C---HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTS
T ss_pred CCCHHHHHHHHHhccCC--CCcCHHHHHHHHhc----ccC-C---HHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhccc
Confidence 35688899999998764 56999999976642 111 1 23688999999999999999999999887653
Q ss_pred ------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 529 ------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 529 ------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
++.++|+.+|.|+||+|+|+||+.+|+
T Consensus 74 ~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 74 RALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 389999999999999999999999986
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.56 E-value=3.6e-15 Score=121.85 Aligned_cols=94 Identities=23% Similarity=0.329 Sum_probs=77.6
Q ss_pred ccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----
Q 008127 453 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 528 (577)
Q Consensus 453 ~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~---- 528 (577)
.+.+++..++..++. +|.|+|+||+.++... .. . ...++.+|+.||+|++|+|+.+||+.++...+
T Consensus 6 ~~~~~i~~~~~~~~~--~~~i~f~eF~~~~~~~----~~-~---~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~ 75 (109)
T d1rwya_ 6 LSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLK----KK-S---ADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAR 75 (109)
T ss_dssp SCHHHHHHHHHTTCS--TTCCCHHHHHHHHTGG----GS-C---HHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCC
T ss_pred cCHHHHHHHHHhccc--CCCcCHHHHHHHHccc----cC-C---HHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccc
Confidence 567889999988864 5789999999876421 11 1 23678899999999999999999999886532
Q ss_pred -----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 529 -----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 529 -----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
+++.+|+.+|.|+||+|+|+||+.+|..
T Consensus 76 ~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 76 DLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 4899999999999999999999999975
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.52 E-value=1e-14 Score=118.71 Aligned_cols=96 Identities=21% Similarity=0.313 Sum_probs=78.6
Q ss_pred CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-
Q 008127 450 PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 528 (577)
Q Consensus 450 ~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~- 528 (577)
+-.+++++|..+++.++ .+|.++|.+|+..+.. ... . ...++++|+.||+|++|+|+.+||+.++...+
T Consensus 3 ~d~ls~~dI~~~l~~~~--~~~s~~~~~F~~~~~~----~~~-~---~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~ 72 (108)
T d1rroa_ 3 TDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL----SKM-S---ASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQS 72 (108)
T ss_dssp GGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG----GGS-C---HHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCT
T ss_pred hhhCCHHHHHHHHHhcc--cCCCccHHHHHHHHcc----CcC-C---HHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHh
Confidence 44577889999988886 4567999999865432 111 1 23678899999999999999999999987643
Q ss_pred --------cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 529 --------SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 529 --------~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
++..+|+.+|.|+||.|+|+||+.+|+
T Consensus 73 ~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 73 DARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp TSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 489999999999999999999999986
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.48 E-value=1.7e-14 Score=110.88 Aligned_cols=69 Identities=28% Similarity=0.482 Sum_probs=63.3
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+++++++++++|+.+|.|++|+|+..||..+|. .+| .+++.++..+|+.+|.|++|.|+|+||+.++..
T Consensus 1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~-~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALK-TLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 69 (81)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHH-TTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHH-Hhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 468899999999999999999999999999994 588 689999999999999999999999999987643
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.46 E-value=2.8e-14 Score=109.64 Aligned_cols=74 Identities=24% Similarity=0.458 Sum_probs=68.5
Q ss_pred hccccchHHHhhhccccccccCCC-CCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~-dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
....++++++++++++|+.||+|+ +|+|+..||..+| +.+|..+++.+++.+++.+|.|++|.|+|+||+.+|.
T Consensus 5 ~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l-~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~ 79 (82)
T d1wrka1 5 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVM-RMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 79 (82)
T ss_dssp HHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHH-HHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 345688999999999999999995 8999999999999 5699999999999999999999999999999998775
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.45 E-value=2.3e-14 Score=109.24 Aligned_cols=72 Identities=32% Similarity=0.553 Sum_probs=67.7
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
..++++++++++++|..||.|++|+|+..||..+|. .+|..+++.++..+++.+|.|++|.|+|+||+.++.
T Consensus 2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~ 73 (77)
T d1f54a_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMR-SLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS 73 (77)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHH-HHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 467899999999999999999999999999999994 589999999999999999999999999999998764
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.45 E-value=4e-14 Score=108.82 Aligned_cols=71 Identities=27% Similarity=0.502 Sum_probs=67.1
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
.++++++++++++|..||.|++|+|+..||..+| +.+|..+++.+++.+|+.+|.|++|.|+|+||+.++.
T Consensus 7 ~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l-~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~ 77 (81)
T d1avsa_ 7 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 77 (81)
T ss_dssp HBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHH-HHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 4688999999999999999999999999999999 5699999999999999999999999999999998775
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.44 E-value=2.9e-14 Score=107.36 Aligned_cols=71 Identities=24% Similarity=0.563 Sum_probs=66.7
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
.++++++.+++++|+.||.|++|+|+..||..+|. .+|..++++++..+++.+|.|++|.|+|+||+.+|.
T Consensus 1 qLs~eei~el~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~ 71 (73)
T d2pq3a1 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71 (73)
T ss_dssp CCCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 36889999999999999999999999999999995 599999999999999999999999999999998764
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.43 E-value=1.6e-14 Score=112.60 Aligned_cols=75 Identities=33% Similarity=0.673 Sum_probs=69.3
Q ss_pred HhhccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHH
Q 008127 407 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 407 ~~~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~ 482 (577)
..|...++++++.+++++|+.||+|++|+|+..||..+|. .+|..+++.+++.+|+.+|.|++|.|+|+||+.++
T Consensus 11 ~~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~-~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am 85 (87)
T d1s6ja_ 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp HHSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHH-TTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred HHHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence 3466788899999999999999999999999999999995 59999999999999999999999999999998654
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.41 E-value=2.3e-13 Score=123.04 Aligned_cols=122 Identities=16% Similarity=0.127 Sum_probs=100.7
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
..+..++..+|.|++|.|+.+||..+... ...+..+|+.+|.|++|.|+.+|+..++...... ...
T Consensus 61 ~~~~~l~~~~D~d~~G~I~~~EF~~~~~~-------~~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~---~~~---- 126 (186)
T d1df0a1 61 ETCKIMVDMLDEDGSGKLGLKEFYILWTK-------IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFK---LPC---- 126 (186)
T ss_dssp HHHHHHHHHHCCSSSSEECHHHHHHHHHH-------HHHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEE---CCH----
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHh-------HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhc---ccH----
Confidence 34677788899999999999999988743 3678899999999999999999999887543221 111
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcc--cHHHHHHHH
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLL 554 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~l 554 (577)
.+..+|..+|.|++|.|+.+||..++.....+..+|+.+|.|++|.| +|+||+.+.
T Consensus 127 ~~~~~~~~~d~d~dg~I~f~eFi~~~~~l~~~~~~F~~~D~~~~G~i~l~~~ef~~~~ 184 (186)
T d1df0a1 127 QLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFS 184 (186)
T ss_dssp HHHHHHHHHHCCSTTEECHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCeEeHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHh
Confidence 34457788999999999999999888777788999999999999987 899999875
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.40 E-value=3.3e-13 Score=120.45 Aligned_cols=122 Identities=18% Similarity=0.207 Sum_probs=99.5
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
+..+.++..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+..||..++..... ...+
T Consensus 47 ~~~~~l~~~~d~d~~g~i~~~ef~~~~~~-------~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~---~~~~---- 112 (173)
T d1alva_ 47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNN-------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGF---HLNE---- 112 (173)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTC---CCCH----
T ss_pred HHHHHHHHHhccCCCCcccchhhhhhhhh-------hhHHHHHHHHhccCCCCeecHHHHHHHHHHHHH---hhHH----
Confidence 34567788999999999999999988743 356788999999999999999999987754321 1111
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcc--cHHHHHHHH
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLL 554 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~l 554 (577)
.+..+|..+|.|++|.|+.+||..++.....+..+|+.+|.|+||.| +|+||+.+.
T Consensus 113 ~~~~~~~~~d~d~~G~i~~~EF~~~~~~~~~~~~~f~~~D~d~~G~it~~~~efl~~~ 170 (173)
T d1alva_ 113 HLYSMIIRRYSDEGGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLT 170 (173)
T ss_dssp HHHHHHHHHHTCSSSCBCHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEEHHHHHHHH
T ss_pred HHHHHhhccccCCCCeEeHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHH
Confidence 33456777888999999999999988777778899999999999987 699998875
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.40 E-value=4.9e-13 Score=120.20 Aligned_cols=123 Identities=16% Similarity=0.248 Sum_probs=99.9
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
..+..+|..+|.|++|.|+.+||..++.. ...+..+++.+|.+++|.|+.+||..++..... ... ..
T Consensus 56 ~~~~~l~~~~D~d~~g~i~~~EFl~~~~~-------~~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~---~l~---~e 122 (181)
T d1hqva_ 56 VTVRSIISMFDRENKAGVNFSEFTGVWKY-------ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGY---RLS---DQ 122 (181)
T ss_dssp HHHHHHHHHHCCSSSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTB---CCC---HH
T ss_pred HHHHHHhhccccccccchhhhHHHhhhhh-------ccccccccccccccccchhhhHHHHHHHHHcCC---cch---hH
Confidence 45667788899999999999999988743 356788999999999999999999887754322 111 13
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcc--cHHHHHHHH
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLL 554 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~l 554 (577)
.+..+++.+|.+++|.|+.+||..++.....+.++|+.+|+++||.| +++||+.+|
T Consensus 123 ~~~~~~~~~d~~~dg~Is~~eF~~~~~~l~~l~~~F~~~D~~~dG~i~~~~~ef~~~~ 180 (181)
T d1hqva_ 123 FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 180 (181)
T ss_dssp HHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHHHHHCTTCSSCCCCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEecHHHHHHHh
Confidence 56778999999999999999999887666668889999999999965 799999876
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=4.5e-13 Score=118.02 Aligned_cols=120 Identities=13% Similarity=0.137 Sum_probs=79.2
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHH
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 500 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~ 500 (577)
++.++..+|.|++|.|+..||..++.. ...+..+|+.+|.|++|.|+.+||..++....... . . ..+
T Consensus 42 ~~~li~~~D~~~~G~i~~~EF~~l~~~-------~~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l--~-~---~~~ 108 (165)
T d1k94a_ 42 CRIMIAMLDRDHTGKMGFNAFKELWAA-------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRL--S-P---QTL 108 (165)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCC--C-H---HHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHhhc-------cchhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcC--C-H---HHH
Confidence 445556667788888888887776633 35667777778888888888888776654332111 1 1 245
Q ss_pred HHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcc--cHHHHHHHHh
Q 008127 501 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLLR 555 (577)
Q Consensus 501 ~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~l~ 555 (577)
..+|+.+|+ +|.|+.+||..++.....+.+.|+.+|.|++|.| +++||+.++.
T Consensus 109 ~~l~~~~d~--~g~i~~~eFi~~~~~l~~~~~~F~~~D~d~~G~i~l~~~ef~~~~~ 163 (165)
T d1k94a_ 109 TTIVKRYSK--NGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTM 163 (165)
T ss_dssp HHHHHHHCB--TTBCBHHHHHHHHHHHHHHHHHHHTTCTTCCSEEEEEHHHHHHHHH
T ss_pred HHHHHHcCC--CCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 556777754 4678888777666555456667777788888865 6788877664
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=2.6e-14 Score=127.02 Aligned_cols=129 Identities=12% Similarity=0.096 Sum_probs=88.4
Q ss_pred hcccccc--ccCCCCCCCCHHHHHHHHHhhCCC--CccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHH
Q 008127 421 LRDQFDA--IDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 496 (577)
Q Consensus 421 l~~~F~~--~D~d~dG~i~~~el~~~l~~~~~~--~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~ 496 (577)
|+++|.. +|.|++|.|+..||.++| +..+. ......+..++...|.+++|.|+|+||...+.... ..
T Consensus 7 l~k~~~k~~~d~n~dG~Is~~el~k~l-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~---~r----- 77 (170)
T d2zkmx1 7 LDKILVKLKMQLNSEGKIPVKNFFQMF-PADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC---PR----- 77 (170)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHHS-CSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---CC-----
T ss_pred HHHHHHHHhcccCCCCCCcHHHHHHHH-HHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccC---CH-----
Confidence 3444444 799999999999999998 32322 22334666778889999999999999998775432 11
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----------------cHHHHHHHhCCCCC----CcccHHHHHHHHhh
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------------SIDPLLEEADIDKD----GRISLSEFRRLLRT 556 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------------~~~~~~~~~D~d~d----G~i~~~EF~~~l~~ 556 (577)
..+..+|+.+|.|++|+||.+||+.+|.... .+.+++..++.+.+ |.|++++|..+|.+
T Consensus 78 -~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S 156 (170)
T d2zkmx1 78 -PEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCG 156 (170)
T ss_dssp -HHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHS
T ss_pred -HHHHHHHHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHcC
Confidence 2467799999999999999999999886432 47888988877654 88999999999976
Q ss_pred ccc
Q 008127 557 ASI 559 (577)
Q Consensus 557 ~~~ 559 (577)
...
T Consensus 157 ~en 159 (170)
T d2zkmx1 157 PEN 159 (170)
T ss_dssp TTS
T ss_pred ccC
Confidence 543
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.34 E-value=7.4e-13 Score=120.08 Aligned_cols=117 Identities=26% Similarity=0.366 Sum_probs=95.0
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc------cccH
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HDSE 494 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~------~~~~ 494 (577)
..++|+.+|.|++|.|+..||..++. .++....++.++.+|+.+|.|++|.|+++||..++........ ....
T Consensus 65 ~~~if~~~D~~~~G~I~~~Ef~~~~~-~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~ 143 (190)
T d1fpwa_ 65 ANHLFTVFDKDNNGFIHFEEFITVLS-TTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEA 143 (190)
T ss_dssp HHHHHHTCCSSCSSEECHHHHHHHHH-HHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCC
T ss_pred HHHHHHHhCcCCCCcccHHHHHHHHH-HHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhh
Confidence 46789999999999999999999995 4667778899999999999999999999999987765432111 1111
Q ss_pred HHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhC
Q 008127 495 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 538 (577)
Q Consensus 495 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 538 (577)
.....+..+|+.+|.|+||.|+.+||+.++.....+.+.|..+|
T Consensus 144 ~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~i~~~l~~~d 187 (190)
T d1fpwa_ 144 TPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLYD 187 (190)
T ss_dssp CHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCHHHHHHhhhhc
Confidence 12346788999999999999999999999988777777777665
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.34 E-value=3.3e-13 Score=98.79 Aligned_cols=63 Identities=35% Similarity=0.604 Sum_probs=58.7
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~ 482 (577)
++|+++|+.||+|++|+|+.+||+.++. .+|..+++.++..+++.+|.|++|.|+|+||+.+|
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~-~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMT-NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 4688999999999999999999999995 59999999999999999999999999999998753
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.33 E-value=2.7e-13 Score=104.04 Aligned_cols=64 Identities=30% Similarity=0.482 Sum_probs=60.0
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
++|+++|..||.|++|+|+..||..+|. .+|..+++.+++.+|..+|.|+||.|+|+||+.++.
T Consensus 15 e~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~ 78 (81)
T d1fi5a_ 15 EELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 78 (81)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHH-TSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHH-hcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 4689999999999999999999999994 599999999999999999999999999999998764
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.33 E-value=2.9e-12 Score=115.15 Aligned_cols=120 Identities=21% Similarity=0.232 Sum_probs=88.2
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHH
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 500 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~ 500 (577)
++.+|..+|.|++|.|+..||...+.. ...+...|..+|.+++|.|+.+||..++..... .... ..+
T Consensus 56 ~~~l~~~~d~d~~~~i~~~ef~~~~~~-------~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~---~ls~---~e~ 122 (182)
T d1y1xa_ 56 TEKLLHMYDKNHSGEITFDEFKDLHHF-------ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGY---QVSE---QTF 122 (182)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSC---CCCH---HHH
T ss_pred hhhhhcccccccccccccccccccccc-------ccccccchhccccccchhhhhHHHHHHHHHhCC---chhH---HHH
Confidence 455577778888888888888877643 346777888888888888888888776643211 1111 256
Q ss_pred HHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcc--cHHHHHHH
Q 008127 501 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRL 553 (577)
Q Consensus 501 ~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~ 553 (577)
..+|+.+|.|++|.|+.+||..++.....+.++|+.+|.+++|.| +|+||+..
T Consensus 123 ~~i~~~~d~~~dg~I~~~eF~~~~~~l~~~~~~F~~~D~~~~G~is~~~~~f~~~ 177 (182)
T d1y1xa_ 123 QALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFTFDTFIGG 177 (182)
T ss_dssp HHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred HHHHhhcccCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEeeHHHHHHH
Confidence 678888888888888888888877665567788888888888884 67888754
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.33 E-value=4.7e-13 Score=100.97 Aligned_cols=64 Identities=27% Similarity=0.454 Sum_probs=60.1
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
++|+++|+.||.|++|+|+..||..+|. .+|..+++.+++.+++.+|.|++|.|+|+||+.+|.
T Consensus 9 eel~~~F~~fD~~~~G~I~~~el~~~l~-~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~ 72 (75)
T d1jc2a_ 9 EELANCFRIFDKNADGFIDIEELGEILR-ATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME 72 (75)
T ss_dssp HHHHHHHHHHCCSTTSSEEHHHHHHHHH-HSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHH-hcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 4688999999999999999999999994 599999999999999999999999999999998764
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.31 E-value=9.3e-13 Score=99.30 Aligned_cols=60 Identities=33% Similarity=0.578 Sum_probs=55.8
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++.+|+.||+|++|+|+.+||+.+|..+| +++.+|+.+|.|+||+|+|+||+.+|.+.
T Consensus 9 eel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~~ 74 (75)
T d1jc2a_ 9 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 74 (75)
T ss_dssp HHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence 4688899999999999999999999998887 49999999999999999999999999764
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.30 E-value=6.5e-13 Score=98.02 Aligned_cols=58 Identities=31% Similarity=0.536 Sum_probs=54.0
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcC-------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
.++++|+.||+|++|+|+.+||+.++...| ++..+|+.+|.|+||.|+|+||+.+|.+
T Consensus 3 el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r 67 (68)
T d1c7va_ 3 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 67 (68)
T ss_dssp HHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 578899999999999999999999998876 4899999999999999999999999875
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.30 E-value=7.9e-13 Score=101.40 Aligned_cols=60 Identities=32% Similarity=0.598 Sum_probs=55.9
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++++|+.||+|++|+|+.+||+.++...| +++.+|..+|.|+||+|+|+||+.+|++.
T Consensus 15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~~ 80 (81)
T d1fi5a_ 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 80 (81)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSCC
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhc
Confidence 4688999999999999999999999998887 49999999999999999999999999864
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.30 E-value=9e-13 Score=97.14 Aligned_cols=63 Identities=21% Similarity=0.447 Sum_probs=58.8
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
.++++|+.+|.|++|+|+..||..++ +.+|..+++++++.+|..+|.|+||.|+|+||+.++.
T Consensus 2 ~~r~~F~~~D~d~~G~I~~~El~~~l-~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~ 64 (67)
T d1tiza_ 2 SAKRVFEKFDKNKDGKLSLDEFREVA-LAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHH-HHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred hHHHHHHHHCCCCcCcCcHHHHHHHH-HHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 36789999999999999999999999 4599999999999999999999999999999998764
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.29 E-value=8.8e-13 Score=95.09 Aligned_cols=60 Identities=27% Similarity=0.595 Sum_probs=56.9
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 479 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~ 479 (577)
++++++|+.||++++|+|+..||+.+|. .+|..+++.+++.|++.+|.|++|.|+|+||+
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~-~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl 60 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLT-GLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHH-HTTCCCCHHHHHHHHTTCCCCTTSEECHHHHH
T ss_pred ChHHHHHHHHCCCCCCeEeHHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhc
Confidence 3688999999999999999999999995 59999999999999999999999999999997
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.28 E-value=5.7e-13 Score=98.32 Aligned_cols=64 Identities=20% Similarity=0.452 Sum_probs=58.4
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCC-ccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
++++++|..||.|++|+|+.+||..+| +.+|.. .++.+++.+++.+|.|+||.|+|+||+.+|.
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l-~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIM-QKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHS-STTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHH-HHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 368899999999999999999999999 558875 6999999999999999999999999998764
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.28 E-value=1.2e-12 Score=95.85 Aligned_cols=56 Identities=38% Similarity=0.682 Sum_probs=52.6
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
.++.+|+.||+|++|+|+.+||+.++..+| ++..+++.+|.|+||.|+|+||+++|
T Consensus 4 el~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 4 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 678899999999999999999999998887 48999999999999999999999875
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.27 E-value=1.8e-12 Score=98.52 Aligned_cols=61 Identities=33% Similarity=0.466 Sum_probs=56.4
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
..++++|+.||+|++|+|+.+||+.++..++ ++..+|+.+|.|+||.|+|+||+.+|++.+
T Consensus 9 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~~ 75 (77)
T d1oqpa_ 9 EEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 75 (77)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHccC
Confidence 4788999999999999999999999998876 589999999999999999999999998754
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.27 E-value=3.4e-12 Score=114.80 Aligned_cols=119 Identities=17% Similarity=0.160 Sum_probs=64.9
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHH
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 500 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~ 500 (577)
++.++..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+..||..++....... +.+ .+
T Consensus 65 ~~~li~~~D~d~~G~i~~~EF~~l~~~-------~~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~---~~~---~~ 131 (188)
T d1qxpa2 65 CRSMVNLMDRDGNGKLGLVEFNILWNR-------IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKL---PCQ---LH 131 (188)
T ss_dssp HHHHHHHHCC--CCCCCSSSHHHHHHH-------HHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEEC---CHH---HH
T ss_pred HHHHHHHhcCCCCCcccHHHHHHHHhh-------hHHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcC---CHH---HH
Confidence 445566666666666666666665532 24555666666666666666666665554322111 111 22
Q ss_pred HHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcc--cHHHHHHH
Q 008127 501 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRL 553 (577)
Q Consensus 501 ~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~ 553 (577)
..++.. |.|++|.|+.+||..++.....+..+|+.+|.+++|.| +++||+.+
T Consensus 132 ~~l~~~-~~~~dg~i~f~eFi~~~~~l~~~~~~F~~~D~~~~G~i~l~~~efl~~ 185 (188)
T d1qxpa2 132 QVIVAR-FADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSF 185 (188)
T ss_dssp HHHHHH-TSCSSSBCCHHHHHHHHHHHHHHHHHHHHSCSSCCSCEEEEHHHHHHH
T ss_pred HHHHHH-hcCCCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeeHHHHHHH
Confidence 223333 34666666666666655544445556666666666654 66666544
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.26 E-value=1.4e-12 Score=99.05 Aligned_cols=66 Identities=24% Similarity=0.429 Sum_probs=61.1
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
..++++++|+.||.|++|+|+..||..+|. .+|..++..++..+|+.+|.|++|.|+|+||+.+|.
T Consensus 7 ~~e~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~ 72 (77)
T d1oqpa_ 7 SREEILKAFRLFDDDNSGTITIKDLRRVAK-ELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK 72 (77)
T ss_dssp HHHHHHHHHHHHCTTCSSSEEHHHHHHHHH-HHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCEechHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 345789999999999999999999999995 589999999999999999999999999999998765
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.26 E-value=2.2e-12 Score=94.98 Aligned_cols=57 Identities=30% Similarity=0.518 Sum_probs=53.5
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
++++|+.||+|++|+|+..||+.++..+| ++..+|..+|.|+||.|+|+||+.+|.+
T Consensus 3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 57899999999999999999999998877 5999999999999999999999999975
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.25 E-value=4.1e-12 Score=97.28 Aligned_cols=60 Identities=32% Similarity=0.493 Sum_probs=55.5
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
...++++|+.||+|++|+|+.+||+.++..+| ++.++|+.+|.|+||.|+|+||+.+|+.
T Consensus 5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 5 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 69 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 35688999999999999999999999998887 5999999999999999999999999875
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.25 E-value=4.4e-12 Score=97.09 Aligned_cols=60 Identities=33% Similarity=0.512 Sum_probs=55.4
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
...++.+|+.||+|++|+|+.+||+.++...| ++.++|..+|.|+||.|+|+||+.+|.+
T Consensus 13 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 13 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 34688899999999999999999999998887 5999999999999999999999999975
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.24 E-value=7.6e-12 Score=113.15 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=91.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc-------
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH------- 491 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~------- 491 (577)
..+..+|+.+|.|+||.|+..||..++.. +.....++.+..+|+.+|.|++|.|+++||..++.........
T Consensus 58 ~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~-~~~~~~~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~ 136 (189)
T d1jbaa_ 58 QYVEAMFRAFDTNGDNTIDFLEYVAALNL-VLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEA 136 (189)
T ss_dssp HHHHHHHHHHCCSSSSEECHHHHHHHHHH-HSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTS
T ss_pred HHHHHHHHHhccCCCCeEeehhHHHHHHh-hcccchHHHHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchh
Confidence 35678899999999999999999999965 4456677899999999999999999999998866543221100
Q ss_pred ----ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHH
Q 008127 492 ----DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE 535 (577)
Q Consensus 492 ----~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~ 535 (577)
........+..+|+.+|+|+||.|+.+||..++....++..+|.
T Consensus 137 ~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~i~~~l~ 184 (189)
T d1jbaa_ 137 EQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQ 184 (189)
T ss_dssp STTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTTTTHHHHHH
T ss_pred hhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHHHHHHhc
Confidence 00011235678999999999999999999999988877777765
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.22 E-value=3.5e-12 Score=91.84 Aligned_cols=54 Identities=28% Similarity=0.470 Sum_probs=50.6
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHH
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRR 552 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~ 552 (577)
.++++|+.||+|++|+|+.+||+.++...| ++..+++.+|.|+||.|+|+||++
T Consensus 2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 577899999999999999999999998887 599999999999999999999985
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.21 E-value=7.7e-13 Score=102.84 Aligned_cols=79 Identities=30% Similarity=0.396 Sum_probs=63.8
Q ss_pred CCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCC
Q 008127 468 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDK 541 (577)
Q Consensus 468 d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~ 541 (577)
+++|.|+.++.. +. ..+.+.. ...++.+|+.||+|++|+|+.+||+.++...| ++.++|+.+|.|+
T Consensus 1 ~~~g~id~~~~~--ma--~~l~~~~----i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~ 72 (87)
T d1s6ja_ 1 HSSGHIDDDDKH--MA--ERLSEEE----IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72 (87)
T ss_dssp CCSSSSSSHHHH--SS--SSSCSSS----TTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTC
T ss_pred CCCCccCchHHH--HH--hhCCHHH----HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCC
Confidence 468999998864 22 1222211 12467899999999999999999999998887 5999999999999
Q ss_pred CCcccHHHHHHHH
Q 008127 542 DGRISLSEFRRLL 554 (577)
Q Consensus 542 dG~i~~~EF~~~l 554 (577)
||.|+|+||+.+|
T Consensus 73 ~g~I~~~EFl~am 85 (87)
T d1s6ja_ 73 SGTIDYGEFIAAT 85 (87)
T ss_dssp SSEECHHHHTTCC
T ss_pred CCeEeHHHHHHHH
Confidence 9999999998755
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.21 E-value=5.9e-12 Score=94.35 Aligned_cols=60 Identities=32% Similarity=0.488 Sum_probs=55.2
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
...++.+|+.||+|++|+|+.+||+.++...| ++..+++.+|.|++|.|+|+||+.+|..
T Consensus 7 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~ 72 (73)
T d2pq3a1 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72 (73)
T ss_dssp HHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 34688999999999999999999999998877 4899999999999999999999999864
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.20 E-value=7.2e-12 Score=95.06 Aligned_cols=60 Identities=32% Similarity=0.481 Sum_probs=55.2
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
...++++|+.||+|++|+|+.+||+.+|...| ++.+++..+|.|++|.|+|+||+.+|.+
T Consensus 9 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~ 74 (77)
T d1f54a_ 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74 (77)
T ss_dssp HHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 34688999999999999999999999998877 5999999999999999999999999864
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.19 E-value=1.5e-11 Score=94.14 Aligned_cols=60 Identities=27% Similarity=0.465 Sum_probs=55.2
Q ss_pred HHHHHHHHhhcCCCC-CCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 497 HLRSQAAFEKFDIDR-DGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~-~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
...++++|+.||+|+ +|.|+..||+.++..+| ++.++++.+|.|+||.|+|+||+.+|.+
T Consensus 14 ~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 14 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 457889999999996 79999999999999888 5999999999999999999999999975
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=2.6e-11 Score=108.48 Aligned_cols=114 Identities=14% Similarity=0.137 Sum_probs=87.5
Q ss_pred hccccccccCC-CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhh---cccccHHH
Q 008127 421 LRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL---EEHDSEKW 496 (577)
Q Consensus 421 l~~~F~~~D~d-~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~---~~~~~~~~ 496 (577)
..++|+.||.+ ++|.|+.+||..+|.........++.+..+|+.+|.|++|.|+.+|+..++...... ......+.
T Consensus 59 ~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~ 138 (180)
T d1xo5a_ 59 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 138 (180)
T ss_dssp HHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTH
T ss_pred HHHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHH
Confidence 35689999987 699999999999985544555667889999999999999999999999876543211 11122233
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHH
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLL 534 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~ 534 (577)
...+..+|+.+|.|+||.|+.+||..++....++-+.|
T Consensus 139 ~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~~P~~~~~f 176 (180)
T d1xo5a_ 139 KQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSF 176 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCHHHHhhC
Confidence 34567799999999999999999999887665555544
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=7.3e-12 Score=113.08 Aligned_cols=117 Identities=21% Similarity=0.252 Sum_probs=89.5
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc------ccccH
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE------EHDSE 494 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~------~~~~~ 494 (577)
...+|+.+|.+++|.|+..||..++.. +.....++.++.+|+.+|.|+||.|+.+|+..++....... .....
T Consensus 62 ~~~if~~~d~~~dg~I~~~EF~~~l~~-~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~ 140 (187)
T d1g8ia_ 62 ATFVFNVFDENKDGRIEFSEFIQALSV-TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEEN 140 (187)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGS
T ss_pred HHHHHHHhCcCCCCCCcHHHHHHHHHH-hccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhc
Confidence 355899999999999999999999854 44445677899999999999999999999988765432211 01111
Q ss_pred HHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhC
Q 008127 495 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 538 (577)
Q Consensus 495 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 538 (577)
.....+..+|+.+|.|+||.|+.+||.+++.....+.++|..+|
T Consensus 141 ~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~~~~~l~~~~ 184 (187)
T d1g8ia_ 141 TPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSLYD 184 (187)
T ss_dssp SHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHHHHHHHCCBT
T ss_pred cHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCHHHHHHHHHhh
Confidence 12345778999999999999999999998877666666665444
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.15 E-value=1.4e-11 Score=93.02 Aligned_cols=60 Identities=30% Similarity=0.511 Sum_probs=52.5
Q ss_pred HHHHHHHhhcCCC--CCCcccHHHHhhhhcCcC--------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFDID--RDGFITPEELRMHTGLKG--------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D~d--~~G~I~~~El~~~l~~~~--------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++.+|+.||.+ ++|+|+.+||+.++...| +++++|+.+|.|+||.|+|+||+.+|.+.
T Consensus 5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~ 74 (76)
T d1qx2a_ 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence 3688899999654 579999999999987654 48999999999999999999999999764
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.14 E-value=9.3e-11 Score=94.87 Aligned_cols=90 Identities=18% Similarity=0.234 Sum_probs=66.6
Q ss_pred CCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCC
Q 008127 431 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 510 (577)
Q Consensus 431 d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 510 (577)
+++|.|+..||..++. + ...+++++..+|+.+|.|++|.|+.+|+..++..........+. ..+..+|+.+|.|
T Consensus 19 d~dG~idf~EF~~~~~--~-~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~---~ev~~~~~~~D~d 92 (109)
T d1pvaa_ 19 KAEGSFNHKKFFALVG--L-KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTD---AETKAFLKAADKD 92 (109)
T ss_dssp CSTTCCCHHHHHHHHT--C-TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCH---HHHHHHHHHHCTT
T ss_pred CCCCCCcHHHHHHHHH--H-ccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCH---HHHHHHHHHHCCC
Confidence 4678899999988763 1 23467789999999999999999999987665432211111111 3567789999999
Q ss_pred CCCcccHHHHhhhhcC
Q 008127 511 RDGFITPEELRMHTGL 526 (577)
Q Consensus 511 ~~G~I~~~El~~~l~~ 526 (577)
+||.|+.+||..++..
T Consensus 93 ~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 93 GDGKIGIDEFETLVHE 108 (109)
T ss_dssp CSSSBCHHHHHHHHHC
T ss_pred CcCcEeHHHHHHHHHh
Confidence 9999999999887753
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.13 E-value=2.7e-11 Score=108.32 Aligned_cols=115 Identities=20% Similarity=0.277 Sum_probs=87.7
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc------ccH
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH------DSE 494 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~------~~~ 494 (577)
+..+|+.+|.|++|.|+..||..++.. +.....+..+..+|+.+|.|++|.|+.+|+...+......... ...
T Consensus 53 ~~~lf~~~D~~~~g~I~~~EFl~~~~~-~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~ 131 (178)
T d1s6ca_ 53 AHYLFNAFDTTQTGSVKFEDFVTALSI-LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED 131 (178)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC----------
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHH-HhccchHHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHH
Confidence 466899999999999999999988843 3344567889999999999999999999998765543222110 011
Q ss_pred HHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHH
Q 008127 495 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 536 (577)
Q Consensus 495 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~ 536 (577)
.....+..+|+.+|+|+||.||.+||..++....++-+++..
T Consensus 132 ~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~~~~~~~~l~~ 173 (178)
T d1s6ca_ 132 TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 173 (178)
T ss_dssp -CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCHHHHHHhhh
Confidence 112346689999999999999999999998887766666543
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.12 E-value=9.3e-11 Score=99.26 Aligned_cols=94 Identities=23% Similarity=0.350 Sum_probs=77.5
Q ss_pred HHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC---------
Q 008127 458 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--------- 528 (577)
Q Consensus 458 ~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--------- 528 (577)
++.+|+.+|.|+||.|+++||..++..... ... ...+..+|+.+|.+++|.|+.+||..++....
T Consensus 2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~---~~~---~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~ 75 (134)
T d1jfja_ 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRA---IKN---EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI 75 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCC---SSH---HHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHH
T ss_pred HHHHHHHHcCCCcCCCcHHHHHHHHHHcCC---CCC---HHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 478999999999999999999877654321 111 23577799999999999999999999886543
Q ss_pred cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 529 SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 529 ~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
.+..+|+.+|.|++|.|+.+||..++...
T Consensus 76 ~~~~~F~~~D~~~~g~i~~~el~~~~~~~ 104 (134)
T d1jfja_ 76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKH 104 (134)
T ss_dssp HHHHHHHHHCCSSSSEEEHHHHHHHHTTT
T ss_pred cccccccccccccCCcccHHHHHHHHHhc
Confidence 26789999999999999999999998754
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.11 E-value=1.8e-10 Score=93.22 Aligned_cols=103 Identities=16% Similarity=0.269 Sum_probs=67.3
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 491 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~ 491 (577)
.++.+++.+ ++..+| .+|.|+..||..++. + ...+++++..+|+.+|.|++|.|+.+|+..++.........
T Consensus 5 ~l~~~di~~---~~~~~~--~~G~idf~eF~~~~~--~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ 76 (109)
T d5pala_ 5 VLKADDINK---AISAFK--DPGTFDYKRFFHLVG--L-KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRD 76 (109)
T ss_dssp TSCHHHHHH---HHHHTC--STTCCCHHHHHHHHT--C-TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCC
T ss_pred HccHHHHHH---HHHhcC--CCCcCcHHHHHHHHH--h-cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCc
Confidence 344555443 333343 457888888877652 2 23456788888888888888888888887665432211111
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 492 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 492 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
... ..+..+|+.+|.|+||.|+.+||..++.
T Consensus 77 ~~~---~e~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (109)
T d5pala_ 77 LND---TETKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp CCH---HHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred CCH---HHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 111 2567788888888888888888887664
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.11 E-value=9.4e-11 Score=105.17 Aligned_cols=107 Identities=21% Similarity=0.225 Sum_probs=83.7
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhc--ccccHHHHH
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE--EHDSEKWHL 498 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~--~~~~~~~~~ 498 (577)
...+|+.+|.|++|.|+..||..++.........+..++.+|+.+|.|++|.|+.+|+..++....... .........
T Consensus 56 ~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~ 135 (183)
T d2zfda1 56 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED 135 (183)
T ss_dssp HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCcHHHHHHHHHhhhccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHH
Confidence 467899999999999999999999854333445677899999999999999999999998765432211 112223334
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCc
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLK 527 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 527 (577)
.+..+|+.+|+|+||.|+.+||..++...
T Consensus 136 ~~~~if~~~D~d~dG~Is~~EF~~~~~~~ 164 (183)
T d2zfda1 136 IIDKTFEEADTKHDGKIDKEEWRSLVLRH 164 (183)
T ss_dssp HHHHHHHHHCSSCSSEECHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 57789999999999999999999877643
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=3e-11 Score=95.41 Aligned_cols=69 Identities=23% Similarity=0.223 Sum_probs=62.3
Q ss_pred cchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 413 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 413 ~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+++++.++++++|+.+|+|++|+|+.+|+..+|.+ .+ .+..++..+++.+|.|+||.|+|+||+.+|..
T Consensus 4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~-~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~L 72 (95)
T d1c07a_ 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK-TG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHT-TT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHh-cC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 67889999999999999999999999999999954 44 57889999999999999999999999987653
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.10 E-value=8.6e-11 Score=107.16 Aligned_cols=118 Identities=19% Similarity=0.271 Sum_probs=93.6
Q ss_pred CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhh-cCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCC
Q 008127 432 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 510 (577)
Q Consensus 432 ~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~-D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 510 (577)
+.|.|+.+++..+... ...+..+++.+++.| +.+++|.|+++||..++........ .. ..+..+|+.+|.|
T Consensus 4 ~~~~l~~e~l~~l~~~---t~f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~--~~---~~~~~if~~~D~~ 75 (201)
T d1omra_ 4 KSGALSKEILEELQLN---TKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEAD--PK---AYAQHVFRSFDAN 75 (201)
T ss_dssp SSCTHHHHHHHHHGGG---CSSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSC--CH---HHHHHHHHTTTSC
T ss_pred ccCCCCHHHHHHHHHh---CCCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCC--HH---HHHHHHHHHhccC
Confidence 4688999999877632 347889999999986 7778999999999987754322211 11 2456799999999
Q ss_pred CCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 511 RDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 511 ~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
++|.|+..||...+.... .+..+|+.+|.|++|.|+++||..++...
T Consensus 76 ~~G~I~f~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~ 128 (201)
T d1omra_ 76 SDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128 (201)
T ss_dssp SSSEEEHHHHHHHHHHHHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred CCCeEeehhHHHHHHhhcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHHH
Confidence 999999999987664322 48999999999999999999999998754
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=8.4e-11 Score=104.35 Aligned_cols=90 Identities=20% Similarity=0.455 Sum_probs=65.7
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHH
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 499 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~ 499 (577)
.+..+|+.+|.|++|+|+.+||..+|. .+|...++++++.+++.+| .+|.|+|+||+.++... ..
T Consensus 78 ~~~~~f~~~D~d~sG~i~~~El~~~l~-~~g~~ls~~~~~~l~~~~d--~~g~i~~~eF~~~~~~~------------~~ 142 (172)
T d1juoa_ 78 GWRQHFISFDTDRSGTVDPQELQKALT-TMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACCVKL------------RA 142 (172)
T ss_dssp HHHHHHHTTCTTCCSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHTC--SSSSEEHHHHHHHHHHH------------HH
T ss_pred hhhHHHHHhCcCCCCcCCHHHHHHHHH-HHHHhhhHHHHHHHHHHHH--hcCCcCHHHHHHHHHHH------------HH
Confidence 455668888888888888888888884 4788888888888888886 45778888888766432 14
Q ss_pred HHHHHhhcCCCCCCcc--cHHHHhhhh
Q 008127 500 SQAAFEKFDIDRDGFI--TPEELRMHT 524 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I--~~~El~~~l 524 (577)
+..+|+.+|+|++|.| +.+||..+.
T Consensus 143 ~~~~f~~~D~d~~G~Itl~~~eFl~~~ 169 (172)
T d1juoa_ 143 LTDSFRRRDTAQQGVVNFPYDDFIQCV 169 (172)
T ss_dssp HHHHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEEecHHHHHHHH
Confidence 5567888888888877 446665543
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.08 E-value=7.3e-11 Score=92.57 Aligned_cols=70 Identities=27% Similarity=0.324 Sum_probs=62.8
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
.+++++++.++++|+.+|+|++|+|+.+|+..+|.+ .+ .+..++..|++.+|.|++|.|+|+||+.++..
T Consensus 2 ~ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~-~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~l 71 (92)
T d1fi6a_ 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK-SK--LPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp CCCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHH-HS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHH-cc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHHHH
Confidence 367889999999999999999999999999999966 44 67889999999999999999999999876543
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.07 E-value=2.2e-10 Score=92.83 Aligned_cols=104 Identities=17% Similarity=0.180 Sum_probs=71.4
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++.+++.++...| +.+|.|+..||..++.. ...++++++.+|+.+|.|++|.|+++||..++........
T Consensus 4 ~~~~~~~i~~~~~~~-----~~~~~i~f~eF~~~~~~---~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~ 75 (109)
T d1rwya_ 4 DLLSAEDIKKAIGAF-----TAADSFDHKKFFQMVGL---KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAR 75 (109)
T ss_dssp HHSCHHHHHHHHHTT-----CSTTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCC
T ss_pred hhcCHHHHHHHHHhc-----ccCCCcCHHHHHHHHcc---ccCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccc
Confidence 345555555544443 33578999998877632 1235678888999999999999999999877654322211
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
... ...+..+|+.+|.|+||.|+.+||..++.
T Consensus 76 ~~~---~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 107 (109)
T d1rwya_ 76 DLS---AKETKTLMAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp CCC---HHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred cCC---HHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 111 12566789999999999999999988765
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.05 E-value=4.6e-11 Score=96.44 Aligned_cols=66 Identities=29% Similarity=0.448 Sum_probs=58.4
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhC---CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDL---PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~---~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
..++++.+|+.+|.|++|+|+..||..+|.. + +...++++++.+|+.+|.|+||.|+|+||+.+|.
T Consensus 38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 38 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQN-FSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGG-TCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHhhccCCCCcCcHHHHHHHHHH-hhcccccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 3456899999999999999999999999854 5 4568999999999999999999999999997663
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=5.8e-11 Score=91.41 Aligned_cols=65 Identities=18% Similarity=0.331 Sum_probs=59.8
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHH
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~ 482 (577)
....+.++|..+|.+++|+|+.+||..+|. .+|..+++.++..++..+|.|++|.|+|.||+..+
T Consensus 18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~-~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 18 HYHAITQEFENFDTMKTNTISREEFRAICN-RRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHH-HHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCceEChhHHHHHHH-HhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 346788999999999999999999999995 58999999999999999999999999999998653
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.04 E-value=1.3e-10 Score=103.94 Aligned_cols=110 Identities=20% Similarity=0.277 Sum_probs=85.4
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc------ccc
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HDS 493 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~------~~~ 493 (577)
...++|+.+|.+++|.|+.+||..++.. +-....++.+..+|+.+|.|++|.|+.+||..++........ ...
T Consensus 60 ~~~~lf~~~d~~~~g~i~~~eFl~~~~~-~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~ 138 (181)
T d1bjfa_ 60 FAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDE 138 (181)
T ss_dssp HHHHHHHHHCSSCSSEEEHHHHHHHHHH-HTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGG
T ss_pred HHHHHHHhcCCCCCCcEeHHHHHHHHHH-HhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCccc
Confidence 3567899999999999999999999854 444556778999999999999999999999987764332111 011
Q ss_pred HHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcH
Q 008127 494 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSI 530 (577)
Q Consensus 494 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~ 530 (577)
......+..+|+.+|.|+||.|+.+||.+++....++
T Consensus 139 ~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~~ 175 (181)
T d1bjfa_ 139 STPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSI 175 (181)
T ss_dssp SSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCTHH
T ss_pred ccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHHH
Confidence 1122457789999999999999999999988655443
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.01 E-value=6.1e-10 Score=89.90 Aligned_cols=104 Identities=20% Similarity=0.253 Sum_probs=61.0
Q ss_pred cccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc
Q 008127 411 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 490 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~ 490 (577)
..++.+++..+.. +.+.+|.|+..+|...+. + ...+.++++.+|+.+|.|++|.|+++||..++........
T Consensus 4 d~ls~~dI~~~l~-----~~~~~~s~~~~~F~~~~~--~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~ 75 (108)
T d1rroa_ 4 DILSAEDIAAALQ-----ECQDPDTFEPQKFFQTSG--L-SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAR 75 (108)
T ss_dssp GTSCHHHHHHHHH-----HTCSTTCCCHHHHHHHHS--G-GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSC
T ss_pred hhCCHHHHHHHHH-----hcccCCCccHHHHHHHHc--c-CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccC
Confidence 3445555544432 234556677777755541 1 1235567777777777777777777777765543221111
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 491 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 491 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
...+ ..+..+|+.+|+|+||.|+.+||..+++
T Consensus 76 ~l~~---~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 76 ELTE---SETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CCCH---HHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CCCH---HHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 1111 2456677777777777777777777664
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.01 E-value=3.9e-11 Score=90.53 Aligned_cols=65 Identities=26% Similarity=0.423 Sum_probs=54.2
Q ss_pred hhhccccccccCC--CCCCCCHHHHHHHHHhhCCCCcc--HHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 419 ADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLK--ESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 419 ~~l~~~F~~~D~d--~dG~i~~~el~~~l~~~~~~~~~--~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
++|+++|+.||.+ ++|+|+.+||..+|.. +|..++ +.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~-lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~ 73 (76)
T d1qx2a_ 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQT-LGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHH-HGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHH-hCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence 4678889998664 4699999999999954 666554 457999999999999999999999987653
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=9.4e-11 Score=93.42 Aligned_cols=58 Identities=21% Similarity=0.307 Sum_probs=50.6
Q ss_pred HHHHHhhcCCCCCCcccHHHHhhhhcCcC----------------------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 500 SQAAFEKFDIDRDGFITPEELRMHTGLKG----------------------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 500 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------------------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
++.+|+.+|.||||+|+.+||+.++...+ .+..+|+.+|.|+||.|||+||+.++++.
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~~ 97 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRK 97 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHCC
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcC
Confidence 56799999999999999999998885321 26789999999999999999999998764
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=4.3e-10 Score=98.92 Aligned_cols=106 Identities=19% Similarity=0.197 Sum_probs=83.4
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHH
Q 008127 421 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 500 (577)
Q Consensus 421 l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~ 500 (577)
+.++|..+|.+++|.|+..||..++............+..+|+.+|.|++|.|+.+|+...+...... ..........+
T Consensus 50 ~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~-~~~~~~~~~~~ 128 (165)
T d1auib_ 50 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-NLKDTQLQQIV 128 (165)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTT-SSCHHHHHHHH
T ss_pred HHHHHHHHccccchhhhhhhhhhhccccccchhhHHHHHHHHHHhcccccccccHHHHHHHHHHhccc-cCchHHHHHHH
Confidence 34578899999999999999999986544455566789999999999999999999999876532211 11222234457
Q ss_pred HHHHhhcCCCCCCcccHHHHhhhhcCc
Q 008127 501 QAAFEKFDIDRDGFITPEELRMHTGLK 527 (577)
Q Consensus 501 ~~~F~~~D~d~~G~I~~~El~~~l~~~ 527 (577)
..+|..+|.|+||.|+.+||..++...
T Consensus 129 ~~~~~~~D~~~dG~Is~~EF~~i~~~~ 155 (165)
T d1auib_ 129 DKTIINADKDGDGRISFEEFCAVVGGL 155 (165)
T ss_dssp HHHHHHHCTTSSSSEEHHHHHHHHGGG
T ss_pred HHHHHHcCCCCCCcEeHHHHHHHHhcC
Confidence 789999999999999999999887643
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.99 E-value=2e-10 Score=90.17 Aligned_cols=69 Identities=28% Similarity=0.396 Sum_probs=59.0
Q ss_pred HHHhhhccccccc-cCCCC-CCCCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~-D~d~d-G~i~~~el~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..++.+.++|..+ |.||+ |+|+.+||+.+|.... ....++.+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 6 ~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~ 80 (93)
T d1zfsa1 6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 4567899999988 88885 9999999999996643 23567899999999999999999999999987754
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.98 E-value=3.7e-10 Score=89.12 Aligned_cols=60 Identities=17% Similarity=0.300 Sum_probs=52.2
Q ss_pred HHHHHHHhhc-CCCCC-CcccHHHHhhhhcCcC--------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKF-DIDRD-GFITPEELRMHTGLKG--------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~~~--------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..+..+|..| |+||+ |+|+.+||+.++...+ .++++|+.+|.|+||.|+|+||+.+|.+.
T Consensus 14 ~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l 83 (98)
T d1yuta1 14 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 83 (98)
T ss_dssp HHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 4678899988 88885 9999999999886432 49999999999999999999999999753
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.98 E-value=1.6e-10 Score=91.25 Aligned_cols=69 Identities=19% Similarity=0.328 Sum_probs=58.5
Q ss_pred HHHhhhccccccc-cCCCC-CCCCHHHHHHHHHhhCC-CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~-D~d~d-G~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..+..+.++|+.| |.||+ |+|+..||+.+|...++ ...+...++.+|+.+|.|+||.|+|+||+.++..
T Consensus 11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~ 82 (98)
T d1yuta1 11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 82 (98)
T ss_dssp HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 4577899999998 78875 99999999999976544 3456667999999999999999999999987754
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.96 E-value=1.5e-10 Score=87.39 Aligned_cols=60 Identities=27% Similarity=0.464 Sum_probs=51.8
Q ss_pred HHHHHHHhhcCC-C-CCCcccHHHHhhhhcCcC--------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFDI-D-RDGFITPEELRMHTGLKG--------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D~-d-~~G~I~~~El~~~l~~~~--------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..++.+|..||. + ++|+|+.+||+.++.... +++.+|+.+|.|+||.|+|+||+.+|.+.
T Consensus 7 ~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l 76 (78)
T d1cb1a_ 7 AELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp HHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 478889999964 4 469999999999886542 48999999999999999999999999864
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.95 E-value=2.7e-10 Score=88.81 Aligned_cols=60 Identities=25% Similarity=0.443 Sum_probs=52.1
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-----------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 497 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 497 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
...+..+|..||.| +|+|+.+||+.++.... .++.+|+.+|.|+||+|+|+||+.+|.+.
T Consensus 8 ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 78 (92)
T d1a4pa_ 8 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (92)
T ss_dssp HHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence 34688899999987 89999999999886422 48999999999999999999999998654
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.94 E-value=1.1e-10 Score=91.18 Aligned_cols=69 Identities=20% Similarity=0.336 Sum_probs=58.0
Q ss_pred hHHHhhhccccccccCCCCCCCCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..++.+..+|+.+|.| +|+|+.+||..+|.... +...++..++.+|..+|.|+||.|+|+||+.++..
T Consensus 5 E~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 77 (92)
T d1a4pa_ 5 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 77 (92)
T ss_dssp HHHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH
Confidence 34678899999999987 89999999999996532 23345678999999999999999999999987654
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.94 E-value=3.9e-10 Score=88.66 Aligned_cols=69 Identities=23% Similarity=0.351 Sum_probs=61.1
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
.+++++..+++++|+.+| +++|+|+.+|+..+|.+ .| .+..+++.|++.+|.|++|.|+|+||+.++..
T Consensus 3 ~ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~-~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~L 71 (95)
T d2jxca1 3 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN-SK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 71 (95)
T ss_dssp SSCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTT-SS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence 367889999999999999 89999999999999954 45 56789999999999999999999999876543
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.94 E-value=1.6e-10 Score=88.96 Aligned_cols=70 Identities=20% Similarity=0.391 Sum_probs=61.4
Q ss_pred hHHHhhhccccccc-cCCCCCC-CCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAI-DVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~-D~d~dG~-i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..++.+..+|+.+ |.||+|. ++.+||+.+|...+|...++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 6 E~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~ 77 (87)
T d1xk4a1 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77 (87)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 34567889999888 9999996 5999999999777888888889999999999999999999999987754
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=98.94 E-value=3.2e-10 Score=97.46 Aligned_cols=101 Identities=24% Similarity=0.361 Sum_probs=77.2
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 498 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~ 498 (577)
..+..+|..+|.+++|.|+..||..++..........+.+..+|+.+|.|++|.|+.+||...+...... .. ..
T Consensus 45 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~---~~---~~ 118 (146)
T d1exra_ 45 AELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK---LT---DD 118 (146)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCC---CC---HH
T ss_pred HHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhc---CC---HH
Confidence 3556778888999999999999998875433323345688889999999999999999998776543221 11 13
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
.+..+|+.+|.|+||.|+.+||.+++.
T Consensus 119 ~~~~i~~~~D~d~dG~i~~~eF~~~l~ 145 (146)
T d1exra_ 119 EVDEMIREADIDGDGHINYEEFVRMMV 145 (146)
T ss_dssp HHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence 577789999999999999999988764
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.94 E-value=2.4e-10 Score=89.67 Aligned_cols=60 Identities=20% Similarity=0.277 Sum_probs=52.1
Q ss_pred HHHHHHHhhc-CCCCC-CcccHHHHhhhhcCcC-----------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKF-DIDRD-GFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..+.++|..| |+||+ |+|+.+||+.+|...+ ++..+|+.+|.|+||.|+|+||+.+|...
T Consensus 9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l 81 (93)
T d1zfsa1 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 4688899998 88975 9999999999886542 38899999999999999999999998654
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.93 E-value=3.4e-10 Score=86.97 Aligned_cols=57 Identities=25% Similarity=0.394 Sum_probs=52.6
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 554 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~l 554 (577)
..+.++|+.||+|++|+|+.+||+.+|...+ ++..++..+|.|+||.|+|.||+..+
T Consensus 20 ~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 20 HAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 4678899999999999999999999998776 59999999999999999999999876
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.93 E-value=8.6e-11 Score=88.81 Aligned_cols=69 Identities=23% Similarity=0.387 Sum_probs=57.3
Q ss_pred HHHhhhccccccccC-C-CCCCCCHHHHHHHHHhhC-CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAIDV-D-KNGSISLEEMRQALAKDL-PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~-d-~dG~i~~~el~~~l~~~~-~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
...++|+.+|+.||. + +.|+|+..||+.+|...+ +...++.+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~ 75 (78)
T d1cb1a_ 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 446789999999975 3 458999999999997654 34556678999999999999999999999987653
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.93 E-value=2.6e-10 Score=88.80 Aligned_cols=61 Identities=16% Similarity=0.206 Sum_probs=53.2
Q ss_pred HHHHHHHhhc-CCCCCC-cccHHHHhhhhcCcC-----------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 498 LRSQAAFEKF-DIDRDG-FITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 498 ~~~~~~F~~~-D~d~~G-~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
..+..+|..| |+||+| .|+.+||+++|+... +++++|+.+|.|+||.|+|+||+.+|....
T Consensus 9 ~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~ 82 (93)
T d1ksoa_ 9 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC 82 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 4678899998 999999 599999999886432 489999999999999999999999998754
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.93 E-value=2.9e-10 Score=89.56 Aligned_cols=59 Identities=24% Similarity=0.300 Sum_probs=53.6
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++++|+.+|+|++|+|+.+|++.++...+ ++..+++.+|.|+||.|+|+||+.+|+-
T Consensus 10 ~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~L 72 (95)
T d1c07a_ 10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72 (95)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 3677899999999999999999999998776 5899999999999999999999987754
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.92 E-value=4.4e-10 Score=87.47 Aligned_cols=70 Identities=23% Similarity=0.387 Sum_probs=60.0
Q ss_pred hHHHhhhccccccc-cCCCCC-CCCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAI-DVDKNG-SISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~-D~d~dG-~i~~~el~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..+..+..+|+.+ |.||+| +|+..||+.+|...+ +...++.++..+|+.+|.|+||.|+|+||+.++..
T Consensus 5 E~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~ 80 (93)
T d1ksoa_ 5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 80 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 45677889999987 999999 599999999997643 34457889999999999999999999999987654
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.90 E-value=8e-10 Score=86.25 Aligned_cols=62 Identities=16% Similarity=0.251 Sum_probs=52.5
Q ss_pred HHHHHHHHhhc-CCCCCC-cccHHHHhhhhcCcC-----------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 497 HLRSQAAFEKF-DIDRDG-FITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 497 ~~~~~~~F~~~-D~d~~G-~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
...+..+|..| |+||+| +|+.+||+.++.... +++++|+.+|.|+||.|+|+||+.+|.+..
T Consensus 8 i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~ 82 (93)
T d3c1va1 8 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA 82 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Confidence 34678899998 777765 699999999986532 489999999999999999999999998754
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.90 E-value=8.5e-10 Score=86.10 Aligned_cols=69 Identities=19% Similarity=0.354 Sum_probs=58.4
Q ss_pred HHHhhhccccccc-cCCCCC-CCCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAI-DVDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~-D~d~dG-~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..++.+.++|..+ |.|++| +|+.+||+.+|... ++...++++++++|+.+|.|+||.|+|+||+.++..
T Consensus 6 ~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~ 80 (93)
T d3c1va1 6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 80 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Confidence 4567899999998 677765 69999999999653 345678899999999999999999999999987654
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.89 E-value=8.1e-10 Score=87.69 Aligned_cols=73 Identities=25% Similarity=0.348 Sum_probs=56.8
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC-------------cHHHHHHHhCCCCCCcccHHHHHHHHhhccc----C
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADIDKDGRISLSEFRRLLRTASI----S 560 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~~----~ 560 (577)
..+..+|..|| +++|.|+.+||+.++.... .++++|+.+|.|+||+|+|+||+.+|..... .
T Consensus 10 ~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~~~~~~~ 88 (100)
T d1psra_ 10 IGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDIATDYHKQ 88 (100)
T ss_dssp HHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHHHHH
Confidence 45677888887 7899999999999887532 4899999999999999999999999976432 2
Q ss_pred CCCCCCCCCCC
Q 008127 561 SRNVPPSPSGH 571 (577)
Q Consensus 561 ~~~~~~~~~~~ 571 (577)
.....|..+|+
T Consensus 89 ~~~~~~~~~~~ 99 (100)
T d1psra_ 89 SHGAAPCSGGS 99 (100)
T ss_dssp TTTCCSCCCCC
T ss_pred HcCCCCCCCCC
Confidence 33344555554
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.89 E-value=1.1e-09 Score=84.22 Aligned_cols=61 Identities=20% Similarity=0.263 Sum_probs=52.6
Q ss_pred HHHHHHHhhc-CCCCCCcc-cHHHHhhhhcC-cC------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 498 LRSQAAFEKF-DIDRDGFI-TPEELRMHTGL-KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 498 ~~~~~~F~~~-D~d~~G~I-~~~El~~~l~~-~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
..+..+|+.| |+||+|.+ +.+||+.++.. .+ .++++|+.+|.|+||+|+|+||+.+|.+..
T Consensus 10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~la 79 (87)
T d1xk4a1 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMG 79 (87)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 4677889888 99999965 99999998864 34 599999999999999999999999998643
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.86 E-value=1.3e-09 Score=85.21 Aligned_cols=59 Identities=24% Similarity=0.350 Sum_probs=53.1
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..++.+|+.+|+|++|+|+.+|++.++...+ ++..+++.+|.|+||.|+|+||+.+|+-
T Consensus 9 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~l 71 (92)
T d1fi6a_ 9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHHHHHHHhCCCCCCeecHHHHHHHHHH
Confidence 4678899999999999999999999998766 5899999999999999999999976654
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.85 E-value=5.4e-10 Score=86.20 Aligned_cols=70 Identities=21% Similarity=0.397 Sum_probs=60.2
Q ss_pred hHHHhhhccccccc-cCCCCC-CCCHHHHHHHHHhh--CCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAI-DVDKNG-SISLEEMRQALAKD--LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~-D~d~dG-~i~~~el~~~l~~~--~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
+..+..+..+|+.+ |+||+| +|+..||+.++... .+...++++++.+++.+|.|+||.|+|+||+.++..
T Consensus 5 E~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~ 78 (89)
T d1k8ua_ 5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 78 (89)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 45677889999988 999999 69999999999664 345567789999999999999999999999987654
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.84 E-value=9.8e-10 Score=94.39 Aligned_cols=63 Identities=24% Similarity=0.459 Sum_probs=58.5
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHH
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~ 482 (577)
.+.++.+|+.+|+|++|+|+.+||+.+|. .+|...++.+++.+++.+| |+||.|+|+||+.+|
T Consensus 82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m 144 (146)
T d1lkja_ 82 EQELLEAFKVFDKNGDGLISAAELKHVLT-SIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALL 144 (146)
T ss_dssp HHHHHHHHHHHCSSSSCEEEHHHHHHHHH-HHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHh
Confidence 35788999999999999999999999995 5899999999999999999 999999999999766
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.82 E-value=3.5e-10 Score=91.42 Aligned_cols=71 Identities=23% Similarity=0.280 Sum_probs=62.1
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 485 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~ 485 (577)
.+++++++.+.++|+.+|+|++|+|+.+|++.+|.+ .| ++..++..|++.+|.|++|.|+++||+.++..+
T Consensus 15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~-s~--L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~Li 85 (110)
T d1iq3a_ 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK-SK--LSIPELSYIWELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCS-SS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHh-hc--cchHHHHHHHHHhccCCCCeECHHHHHHHHHHH
Confidence 467888999999999999999999999999999844 44 556789999999999999999999999776543
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.81 E-value=8.8e-09 Score=87.55 Aligned_cols=98 Identities=16% Similarity=0.210 Sum_probs=80.0
Q ss_pred HHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------
Q 008127 455 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 528 (577)
Q Consensus 455 ~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------ 528 (577)
..+++++|..+|.|++|.|+++||..++...... .. ...+...|..+|.+++|.|+.+||...+....
T Consensus 5 ~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~---~~---~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 78 (141)
T d2obha1 5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFE---PK---KEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTK 78 (141)
T ss_dssp HHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCC---CC---HHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCc---hh---HHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccH
Confidence 3478899999999999999999999776543211 11 23567789999999999999999988775432
Q ss_pred -cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 529 -SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 529 -~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
.+..+|..+|.+++|.|+.+||..++....
T Consensus 79 ~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g 109 (141)
T d2obha1 79 EEILKAFKLFDDDETGKISFKNLKRVAKELG 109 (141)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcccCCCCccHHHHHHHHHHhC
Confidence 478899999999999999999999998754
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.81 E-value=1.2e-09 Score=84.14 Aligned_cols=61 Identities=25% Similarity=0.374 Sum_probs=52.9
Q ss_pred HHHHHHHhhc-CCCCCC-cccHHHHhhhhcCc---C------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 498 LRSQAAFEKF-DIDRDG-FITPEELRMHTGLK---G------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 498 ~~~~~~F~~~-D~d~~G-~I~~~El~~~l~~~---~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
..+..+|..| |+||+| .|+..||+.++... + +++++++.+|.|+||+|+|+||+.+|.+..
T Consensus 9 ~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~la 80 (89)
T d1k8ua_ 9 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGALA 80 (89)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 4677899998 999999 59999999988642 2 499999999999999999999999997643
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.79 E-value=6.6e-09 Score=88.90 Aligned_cols=99 Identities=16% Similarity=0.083 Sum_probs=76.5
Q ss_pred cHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCC--CCCcccHHHHhhhhcCcC---
Q 008127 454 KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID--RDGFITPEELRMHTGLKG--- 528 (577)
Q Consensus 454 ~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d--~~G~I~~~El~~~l~~~~--- 528 (577)
+.++++++|..+|.|++|.|+.+||..++...... .. ...+..++..+|.+ ++|.|+.+||..++....
T Consensus 2 ~~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~--~~----~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~ 75 (145)
T d2mysc_ 2 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQN--PT----NAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNK 75 (145)
T ss_pred CHHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhc--ch----hhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhcc
Confidence 35788999999999999999999999877543211 11 12455567766554 789999999988774321
Q ss_pred ------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 529 ------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 529 ------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
++..+|+.+|.|++|.|+.+||..+|....
T Consensus 76 ~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g 111 (145)
T d2mysc_ 76 DQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLG 111 (145)
T ss_pred ccchHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhC
Confidence 378899999999999999999999998644
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.79 E-value=1.6e-09 Score=93.09 Aligned_cols=64 Identities=27% Similarity=0.577 Sum_probs=59.5
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
+.+.++|..+|.+++|+|+.+||..+|. .+|..++++++..++..+|.|+||.|+|+||+..+.
T Consensus 81 ~~l~~~F~~~D~~~~G~I~~~el~~~l~-~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~ 144 (146)
T d1m45a_ 81 EDFVKAFQVFDKESTGKVSVGDLRYMLT-GLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 144 (146)
T ss_dssp HHHHHHHHTTCSSSSSEEEHHHHHHHHH-HSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred HHHHHHHHhhccccccccchhhhhhhhc-ccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence 5688899999999999999999999995 589999999999999999999999999999997664
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.79 E-value=1.3e-09 Score=94.77 Aligned_cols=66 Identities=29% Similarity=0.463 Sum_probs=58.5
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
..++++.+|+.+|.|++|+|+.+||..++ ..+|...++++++.+|+.+|.|+||.|+|+||+.+|.
T Consensus 89 ~~~~l~~~F~~~D~d~~G~I~~~e~~~~~-~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~ 154 (156)
T d1dtla_ 89 SEEELSDLFRMFDKNADGYIDLEELKIML-QATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154 (156)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHHHHGGGG-TTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCCcCcHHHHHHHH-hhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 34578899999999999999999999998 5689999999999999999999999999999998663
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.79 E-value=5e-10 Score=88.95 Aligned_cols=70 Identities=19% Similarity=0.343 Sum_probs=57.1
Q ss_pred chHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCC------CccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 414 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 414 ~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~------~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
.+..+..+.++|+.+| +++|.|+..||+.+|...++. ..++..++.+|+.+|.|+||.|+|+||+.++..
T Consensus 5 ~E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 80 (100)
T d1psra_ 5 AERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 3566788899999997 789999999999999664432 123457899999999999999999999987754
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=1.3e-09 Score=86.68 Aligned_cols=64 Identities=23% Similarity=0.365 Sum_probs=51.4
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHhhC---CC------------CccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 420 DLRDQFDAIDVDKNGSISLEEMRQALAKDL---PW------------KLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 420 ~l~~~F~~~D~d~dG~i~~~el~~~l~~~~---~~------------~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
.++.+|..+|.|+||+|+.+||..++.... .. ...+..++.+|..+|.|+||.|||+||+.++.
T Consensus 17 ~~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~ 95 (99)
T d1snla_ 17 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 95 (99)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence 367899999999999999999999985421 10 11234678899999999999999999997653
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.77 E-value=1.9e-09 Score=91.86 Aligned_cols=64 Identities=30% Similarity=0.533 Sum_probs=58.8
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
.+.+.++|+.+|.|++|+|+.+||+.+|. .+|..+++++++.+++.+|.+ ||.|+|+||+.+|.
T Consensus 75 ~~~l~~aF~~~D~d~~G~I~~~el~~~l~-~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~ 138 (140)
T d1ggwa_ 75 PEEFVKGFQVFDKDATGMIGVGELRYVLT-SLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHH-HHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcchHHHHHHHHH-HcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHh
Confidence 45688999999999999999999999995 489999999999999999988 99999999998764
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=5.8e-09 Score=84.06 Aligned_cols=60 Identities=20% Similarity=0.239 Sum_probs=54.1
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..+.++|+.+|+|++|+|+.+|++.++...+ ++..+++.+|.|+||.|+++||+.+|+-.
T Consensus 22 ~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~Li 85 (110)
T d1iq3a_ 22 EYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccchhHHHHHHHHHhhccchHHHHHHHHHhccCCCCeECHHHHHHHHHHH
Confidence 4677899999999999999999999998766 59999999999999999999999777543
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=98.75 E-value=5e-09 Score=94.04 Aligned_cols=67 Identities=19% Similarity=0.159 Sum_probs=56.4
Q ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 417 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 417 ~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
....+..+|..+|.|++|+|+.+||..++. .+|..+++++++.+|+.+|.|+||.|+|+||+.++..
T Consensus 105 ~~~~~~~~F~~~D~d~~G~is~~E~~~~l~-~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~ 171 (189)
T d1qv0a_ 105 IREWGDAVFDIFDKDGSGTITLDEWKAYGK-ISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG 171 (189)
T ss_dssp HHHHHHHHHHHTC----CEECHHHHHHHHH-HHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCCcccchhhHHHHH-hcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 344677889999999999999999999995 5899999999999999999999999999999987654
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.74 E-value=3.9e-09 Score=90.37 Aligned_cols=65 Identities=17% Similarity=0.221 Sum_probs=60.2
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
...+..+|+.||.+++|+|+..||+.+|. .+|..+++++++.+++.+|.|++|.|+|.||+.++.
T Consensus 76 ~~~l~~aF~~fD~~~~g~I~~~el~~~l~-~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~ 140 (145)
T d2mysb_ 76 EDVIMGAFKVLDPDGKGSIKKSFLEELLT-TGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVIT 140 (145)
T ss_pred HHHHHHHHHhhhhcccchhhHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence 35688899999999999999999999994 589999999999999999999999999999998774
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.74 E-value=3e-08 Score=84.32 Aligned_cols=89 Identities=7% Similarity=0.068 Sum_probs=48.4
Q ss_pred CCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCC
Q 008127 431 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 510 (577)
Q Consensus 431 d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 510 (577)
+++|.|+..||..++...+....+++++...|+.+|.|++|.|+.+||..++..... .-++ ..+..+|+.+|.|
T Consensus 51 ~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~---~lt~---~e~~~l~~~~d~~ 124 (142)
T d1wdcb_ 51 EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGD---NFNK---DEMRMTFKEAPVE 124 (142)
T ss_dssp TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSS---CCCH---HHHHHHHHHCCEE
T ss_pred hccCccccccccccccccccccchhhhHHHhhhhhcccCCCcccHHHHHHHHHHccc---cCCH---HHHHHHHHHhCCC
Confidence 455666666666655444444445556666666666666666666666654432211 1111 2344556666665
Q ss_pred CCCcccHHHHhhhhcC
Q 008127 511 RDGFITPEELRMHTGL 526 (577)
Q Consensus 511 ~~G~I~~~El~~~l~~ 526 (577)
+|.|+.+||..+++.
T Consensus 125 -~G~I~y~eF~~~l~~ 139 (142)
T d1wdcb_ 125 -GGKFDYVKFTAMIKG 139 (142)
T ss_dssp -TTEECHHHHHHHHHT
T ss_pred -CCEEcHHHHHHHHhc
Confidence 366666666655543
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.73 E-value=8.3e-09 Score=78.78 Aligned_cols=69 Identities=29% Similarity=0.386 Sum_probs=57.0
Q ss_pred HHHhhhccccccc-cCCCCC-CCCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAI-DVDKNG-SISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~-D~d~dG-~i~~~el~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..+..+..+|+.+ +.++++ +|+..||+.+|...++ ...++..++.+|+.+|.|+||.|+|+||+.++..
T Consensus 5 ~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~ 79 (87)
T d1e8aa_ 5 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 79 (87)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence 4567889999988 566665 6999999999976443 3456789999999999999999999999987653
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.72 E-value=2.2e-08 Score=87.30 Aligned_cols=96 Identities=20% Similarity=0.230 Sum_probs=75.4
Q ss_pred HHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC--------
Q 008127 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------- 528 (577)
Q Consensus 457 ~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------- 528 (577)
++.++|..+|.|++|.|+++||..++..... ... ...+..+|..+|.+++|.|+..|+...+....
T Consensus 21 el~~~F~~~D~d~~G~Is~~el~~~l~~~~~---~~~---~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 94 (162)
T d1topa_ 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQ---NPT---KEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKS 94 (162)
T ss_dssp HHHHHHHTTTCSCSSEEEGGGHHHHHHHTTC---CCC---HHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEcHHHHHHHHhccCC---chh---HHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcccCc
Confidence 5678899999999999999999876553222 111 23677799999999999999999865442111
Q ss_pred --cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 529 --SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 529 --~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
.+..+|+.+|.|++|.|+.+||..+|....
T Consensus 95 ~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~ 126 (162)
T d1topa_ 95 EEELANCFRIFDKNADGFIDIEELGEILRATG 126 (162)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhC
Confidence 367789999999999999999999998643
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.71 E-value=1.1e-08 Score=80.16 Aligned_cols=58 Identities=21% Similarity=0.335 Sum_probs=52.3
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
...+++|+.+| |++|+|+.+|++.++...| ++..+++.+|.|+||.|+|+||+.+|+-
T Consensus 10 ~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~L 71 (95)
T d2jxca1 10 AKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 71 (95)
T ss_dssp HHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCceeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence 46788999999 8999999999999998877 5899999999999999999999876653
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=98.70 E-value=9.2e-09 Score=92.03 Aligned_cols=69 Identities=22% Similarity=0.229 Sum_probs=61.2
Q ss_pred hHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 415 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 415 ~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
......+..+|..+|.|++|+|+.+||+.+|. .+|...+++++..+|+.+|.|+||.|+|+||+.++..
T Consensus 101 ~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~-~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~ 169 (187)
T d1uhka1 101 TLIRIWGDALFDIVDKDQNGAITLDEWKAYTK-AAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG 169 (187)
T ss_dssp CHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCcccchHHHHHHHH-HhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 33445688899999999999999999999995 5888899999999999999999999999999976543
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.69 E-value=6.7e-09 Score=62.36 Aligned_cols=31 Identities=35% Similarity=0.508 Sum_probs=28.4
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcC
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG 528 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 528 (577)
..+++||++||+||||+|+..||+.+|..+|
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 3688999999999999999999999998775
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.69 E-value=1.2e-08 Score=77.95 Aligned_cols=60 Identities=18% Similarity=0.230 Sum_probs=50.6
Q ss_pred HHHHHHHhhc-CCCCCC-cccHHHHhhhhcCcC-----------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKF-DIDRDG-FITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~-D~d~~G-~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..+..+|..| +++|++ .|+.+||+.+++... .++++|+.+|.|+||.|+|+||+.++.+.
T Consensus 8 ~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l 80 (87)
T d1e8aa_ 8 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 80 (87)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 4677899998 667665 699999999886421 39999999999999999999999999764
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.68 E-value=6.9e-09 Score=81.99 Aligned_cols=58 Identities=19% Similarity=0.243 Sum_probs=52.8
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
...++|+.+|+|++|+|+.+|++.++...+ ++..+++.+|.|+||.|+++||+.+|+-
T Consensus 12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~L 73 (99)
T d1qjta_ 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHH
Confidence 355789999999999999999999998777 5899999999999999999999988864
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=98.65 E-value=4.1e-08 Score=86.53 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=75.5
Q ss_pred HHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhccc---ccHHHHHHHHHHHhhc--CCCCCCcccHHHHhhhhcCcC-
Q 008127 455 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH---DSEKWHLRSQAAFEKF--DIDRDGFITPEELRMHTGLKG- 528 (577)
Q Consensus 455 ~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~---~~~~~~~~~~~~F~~~--D~d~~G~I~~~El~~~l~~~~- 528 (577)
..+++.+|+.+|.|+||.|+++||..++......... ............|..+ |.+++|.|+.+|+...+....
T Consensus 5 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~ 84 (174)
T d2scpa_ 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVK 84 (174)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhhhc
Confidence 4578899999999999999999998776543322111 1111222333444543 778999999999987664321
Q ss_pred ----------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 529 ----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 529 ----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
.+..+|+.+|.|+||.|+.+||..+++...
T Consensus 85 ~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~ 124 (174)
T d2scpa_ 85 NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG 124 (174)
T ss_dssp CGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT
T ss_pred chhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHh
Confidence 277899999999999999999999987654
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.64 E-value=7.6e-09 Score=87.78 Aligned_cols=65 Identities=23% Similarity=0.426 Sum_probs=56.1
Q ss_pred HHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHH
Q 008127 416 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 416 ~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~ 482 (577)
...+++.++|+.+|.|++|+|+.+||+.+|. .+|..+++.+++.++.. |.|+||.|+|+||+..+
T Consensus 74 ~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l 138 (139)
T d1w7jb1 74 GTYEDYLEGFRVFDKEGNGKVMGAELRHVLT-TLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKHI 138 (139)
T ss_dssp ----CCHHHHHTTCTTSSSEEEHHHHHHHHH-HSSSCCCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred cHHHHHHHhhhhccCCCCCeEeHHHHHHHHH-HhCCCCCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence 3456788999999999999999999999995 48999999999999975 88999999999999754
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=98.64 E-value=3.2e-08 Score=88.02 Aligned_cols=96 Identities=22% Similarity=0.273 Sum_probs=78.7
Q ss_pred HHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC------cH
Q 008127 457 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SI 530 (577)
Q Consensus 457 ~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~ 530 (577)
+++++|+.+|.|++|.|+++||..++..... .... ..+..+|+.+|.+++|.|+.+++..+..... .+
T Consensus 11 ~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~---~~~~---~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~e~l 84 (182)
T d1s6ia_ 11 GLKELFKMIDTDNSGTITFDELKDGLKRVGS---ELME---SEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENL 84 (182)
T ss_dssp SHHHHHHTTSSSSSSCEEHHHHHHHHTTTTC---CCCH---HHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCST
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCC---cccc---ccchhhhhhhhccccccchHHHHHHHHHhhcccccHHHH
Confidence 5778999999999999999999987754321 1111 3577899999999999999999987654332 48
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 531 DPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 531 ~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
..+|..+|.+++|.|+.+||..+++...
T Consensus 85 ~~aF~~~D~d~~G~i~~~el~~~l~~~g 112 (182)
T d1s6ia_ 85 VSAFSYFDKDGSGYITLDEIQQACKDFG 112 (182)
T ss_dssp HHHHHHTTTTCSSEEEHHHHHHTTTTTT
T ss_pred HHHHHHHhhcCCCccchhhhhhhhhhcC
Confidence 8999999999999999999999987654
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.64 E-value=8.8e-09 Score=81.38 Aligned_cols=64 Identities=17% Similarity=0.215 Sum_probs=56.6
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhh
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 485 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~ 485 (577)
..+.++|+.+|.|++|+|+.+|+..++.+ .| .+..++..|++.+|.|++|.|+++||+.++..+
T Consensus 11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~-s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~Li 74 (99)
T d1qjta_ 11 PVYEKYYRQVEAGNTGRVLALDAAAFLKK-SG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRLV 74 (99)
T ss_dssp THHHHHHHHHCCTTSSCCCSHHHHHHHHT-SS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHH-cC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH
Confidence 45778999999999999999999999954 44 678999999999999999999999999876543
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=98.64 E-value=4.7e-08 Score=86.99 Aligned_cols=105 Identities=17% Similarity=0.222 Sum_probs=77.0
Q ss_pred HHHHHHHHHh-hcCCCCcceehhhHHHHHhhhhhhccc-c--------cHHHHHHHHHHHhhcCCCCCCcccHHHHhhhh
Q 008127 455 ESRVLEILQA-IDCNTDGLVDFSEFVAATLHVHQLEEH-D--------SEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 524 (577)
Q Consensus 455 ~~~~~~~~~~-~D~d~dg~i~f~EF~~~~~~~~~~~~~-~--------~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l 524 (577)
..++..+|+. +|.|+||.|+++||..++......... . ...........+...|.+++|.|+.+++...+
T Consensus 7 ~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~ 86 (185)
T d2sasa_ 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW 86 (185)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeHhhHHH
Confidence 3568899997 599999999999998876543221110 0 01111223456888999999999999998765
Q ss_pred cCcC---------------cHHHHHHHhCCCCCCcccHHHHHHHHhhccc
Q 008127 525 GLKG---------------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 559 (577)
Q Consensus 525 ~~~~---------------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~~ 559 (577)
.... .+..+|+.+|.|+||.|+.+||..++....+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l 136 (185)
T d2sasa_ 87 EKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL 136 (185)
T ss_dssp HHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC
T ss_pred HHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCC
Confidence 3211 2788999999999999999999999976443
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.56 E-value=2.2e-07 Score=79.79 Aligned_cols=107 Identities=14% Similarity=0.138 Sum_probs=73.4
Q ss_pred hccccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCC-CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhh
Q 008127 409 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 487 (577)
Q Consensus 409 ~~~~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~ 487 (577)
+....+++++..+ ...|.+++|.|+.+||..++..... ...+..++...|+.+|.+++|.|+.+||..++.....
T Consensus 38 lG~~~t~~e~~~~----~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~ 113 (152)
T d1wdcc_ 38 LGINPRNEDVFAV----GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGE 113 (152)
T ss_dssp TTCCCCHHHHHHT----TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSS
T ss_pred hccCccHhhhhhh----hhhhccccccccccccccccccccccchhHHHhhhhhhhccccccCccchHHHHHHHHHHcCC
Confidence 3344555555544 2357788899999999888755443 3456678888999999999999999999877654321
Q ss_pred hcccccHHHHHHHHHHHhhcCC--CCCCcccHHHHhhhhc
Q 008127 488 LEEHDSEKWHLRSQAAFEKFDI--DRDGFITPEELRMHTG 525 (577)
Q Consensus 488 ~~~~~~~~~~~~~~~~F~~~D~--d~~G~I~~~El~~~l~ 525 (577)
.-++ ..+..+++.+|. |++|.|+.+||...+.
T Consensus 114 ---~ls~---~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~ 147 (152)
T d1wdcc_ 114 ---RLSD---EDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 147 (152)
T ss_dssp ---CCCH---HHHHHHHHHHTCCCCTTSEEEHHHHHHHHH
T ss_pred ---CCCH---HHHHHHHHHhccCCCCCCEEEHHHHHHHHh
Confidence 1111 246677888875 4568899999876553
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.50 E-value=1.9e-07 Score=82.06 Aligned_cols=106 Identities=16% Similarity=0.216 Sum_probs=78.1
Q ss_pred ccHHHHHHHHHhhcCCCCcceehhhHHHHHhhhhhhcc--ccc-------HHHHHHHHHHHhhcCCCCCCcccHHHHhhh
Q 008127 453 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE--HDS-------EKWHLRSQAAFEKFDIDRDGFITPEELRMH 523 (577)
Q Consensus 453 ~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~~~~~~~--~~~-------~~~~~~~~~~F~~~D~d~~G~I~~~El~~~ 523 (577)
.+.+.++.+|+.+|.|++|.|+++||..++........ ... ..........+...|.+++|.|+..++...
T Consensus 4 ~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 83 (176)
T d1nyaa_ 4 IASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRV 83 (176)
T ss_dssp HHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHH
Confidence 35678999999999999999999999887654322110 111 111122355778899999999999998764
Q ss_pred hcCcC--------------cHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 524 TGLKG--------------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 524 l~~~~--------------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
+.... .+..+|..+|.|+||.|+.+||..++....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~ 132 (176)
T d1nyaa_ 84 TENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG 132 (176)
T ss_dssp HHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT
T ss_pred HhhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcC
Confidence 43221 267789999999999999999999987643
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.49 E-value=3.1e-07 Score=86.47 Aligned_cols=86 Identities=17% Similarity=0.142 Sum_probs=63.7
Q ss_pred cceeeeeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEEEE
Q 008127 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 175 (577)
Q Consensus 96 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~lv 175 (577)
+.|++.+..+-|+.+.||++. ..+..+++|+....... ....+.+|..++..|..+--+.+++.+...++..|+|
T Consensus 14 ~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~---~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv 88 (263)
T d1j7la_ 14 EKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp TTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred hceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCccc---chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEE
Confidence 356777765556667999985 56677889987544321 2234678999999887665678888888888999999
Q ss_pred EeccCCCchhH
Q 008127 176 MELCEGGELLD 186 (577)
Q Consensus 176 ~e~~~~g~L~~ 186 (577)
|++++|.++.+
T Consensus 89 ~~~l~G~~~~~ 99 (263)
T d1j7la_ 89 MSEADGVLCSE 99 (263)
T ss_dssp EECCSSEEHHH
T ss_pred EEecccccccc
Confidence 99999987754
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.42 E-value=2.2e-07 Score=70.90 Aligned_cols=69 Identities=20% Similarity=0.369 Sum_probs=55.8
Q ss_pred HHHhhhccccccc-cCCCC-CCCCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~-D~d~d-G~i~~~el~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..+..+..+|+.+ ..+|+ ++|++.||+.+|.+.++ ....+..++.+|+.+|.|+||.|+|+||+.++..
T Consensus 6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (90)
T d3cr5x1 6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 80 (90)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 4566788899988 45565 57999999999987554 3345678999999999999999999999976653
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.29 E-value=7.5e-07 Score=68.48 Aligned_cols=60 Identities=23% Similarity=0.372 Sum_probs=50.0
Q ss_pred HHHHHHHhhc-CCCCC-CcccHHHHhhhhcCcC-----------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKF-DIDRD-GFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..+..+|..| .++|+ +.|+..||+.++...- .++++|+.+|.|+||.|+|+||+.++.+.
T Consensus 9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l 81 (95)
T d1qlsa_ 9 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 81 (95)
T ss_dssp HHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 4577789887 55665 6799999999987521 39999999999999999999999988654
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.29 E-value=4.9e-07 Score=68.91 Aligned_cols=60 Identities=20% Similarity=0.332 Sum_probs=49.8
Q ss_pred HHHHHHHhhc-CCCCC-CcccHHHHhhhhcCc-----C------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKF-DIDRD-GFITPEELRMHTGLK-----G------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~~-----~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..+..+|..| .++|+ +.|+..||+.++... . .++++|+.+|.|+||.|+|+||+.++.+.
T Consensus 9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (90)
T d3cr5x1 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI 81 (90)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 4577899998 56665 579999999988641 1 38999999999999999999999988654
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.26 E-value=4.6e-08 Score=85.84 Aligned_cols=97 Identities=10% Similarity=0.050 Sum_probs=67.1
Q ss_pred HHHHHHh--hcCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhcCcC---cHHH
Q 008127 458 VLEILQA--IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---SIDP 532 (577)
Q Consensus 458 ~~~~~~~--~D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~---~~~~ 532 (577)
++.++.. +|.|++|.|+++|+..++...... .......+..+|...|.+++|.|+-+||..++..+. ++..
T Consensus 7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~----~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~r~ei~~ 82 (170)
T d2zkmx1 7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKR----VEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCPRPEIDE 82 (170)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHH----HHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSCCHHHHT
T ss_pred HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhh----HHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCCHHHHHH
Confidence 4445554 799999999999998776432111 011123556689999999999999999998776543 6888
Q ss_pred HHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 533 LLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 533 ~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
+|..+|.|++|.|+.+||..+|....
T Consensus 83 ~F~~~d~d~~~~it~~el~~fL~~~Q 108 (170)
T d2zkmx1 83 IFTSYHAKAKPYMTKEHLTKFINQKQ 108 (170)
T ss_dssp TCC--------CCCHHHHHHHHHHTC
T ss_pred HHHHHcCCCCCcccHHHHHHHHHHHh
Confidence 99999999999999999999998644
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=98.24 E-value=1.1e-06 Score=85.09 Aligned_cols=102 Identities=23% Similarity=0.298 Sum_probs=73.2
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccH-----------------------------HHHHHHHHhhcCC
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKE-----------------------------SRVLEILQAIDCN 468 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~-----------------------------~~~~~~~~~~D~d 468 (577)
...+...|..+|.+++|.++..++..++.. .+..... ..+..+|..+|.|
T Consensus 187 ~~~~~~~F~~~d~d~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d 265 (321)
T d1ij5a_ 187 LAALVADFRKIDTNSNGTLSRKEFREHFVR-LGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFD 265 (321)
T ss_dssp HHTSCCCHHHHCTTCCSEECHHHHHHHHHH-TTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred hhhhhHHHHHHhhcccccchhHHHhhhhhc-ccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcC
Confidence 345677788888888888888888887744 4433221 1123467888999
Q ss_pred CCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 469 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 469 ~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
++|.|+.+||..++..... ..... ..+..+|+.+|.|+||+|+.+||..+|-
T Consensus 266 ~~G~Is~~E~~~~l~~~~~-~~~~~----~~~~~l~~~~D~d~dG~Is~~EF~~~ml 317 (321)
T d1ij5a_ 266 KSGQLSKEEVQKVLEDAHI-PESAR----KKFEHQFSVVDVDDSKSLSYQEFVMLVL 317 (321)
T ss_dssp SCSSEEHHHHHHHHHHTTC-CGGGC----STHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHcCC-CcCcH----HHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999999887754432 11111 2466799999999999999999998764
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.18 E-value=2.1e-07 Score=55.68 Aligned_cols=31 Identities=35% Similarity=0.656 Sum_probs=27.2
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCC
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLP 450 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~ 450 (577)
++|+++|+.||+|+||+|+..||+.+|. .+|
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~-~lG 33 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMT-NLG 33 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTT-SCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcC
Confidence 4789999999999999999999999983 354
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.18 E-value=5.1e-07 Score=69.44 Aligned_cols=69 Identities=22% Similarity=0.285 Sum_probs=54.3
Q ss_pred HHHhhhccccccc-cCCCC-CCCCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~-D~d~d-G~i~~~el~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..+..+..+|..+ ..+|+ ++|+..||+.+|...++ ....+..++.+|+.+|.|+||.|+|+||+.++..
T Consensus 6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~ 80 (95)
T d1qlsa_ 6 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG 80 (95)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 3466788889887 45565 68999999999965443 2344578999999999999999999999977654
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.13 E-value=6.5e-07 Score=50.96 Aligned_cols=30 Identities=33% Similarity=0.382 Sum_probs=25.8
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCc
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLK 527 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 527 (577)
+.+.+.|++||+|+||+|+.+||..+++..
T Consensus 4 eELae~FRifDkNaDGyiD~eEl~~ilr~t 33 (34)
T d1ctda_ 4 EELANAFRIFDKNADGYIDIEELGEILRAT 33 (34)
T ss_dssp HHHHHHHHTTCCSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCcccccHHHHHHHHHhc
Confidence 367789999999999999999999887643
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.12 E-value=1.4e-06 Score=66.78 Aligned_cols=69 Identities=25% Similarity=0.408 Sum_probs=53.3
Q ss_pred HHHhhhccccccc-cCCCC-CCCCHHHHHHHHHhhCCC----CccHHHHHHHHHhhcCCCCcceehhhHHHHHhh
Q 008127 416 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 484 (577)
Q Consensus 416 ~~~~~l~~~F~~~-D~d~d-G~i~~~el~~~l~~~~~~----~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~~ 484 (577)
..+..+..+|..+ ..+|+ +++++.||+.+|...++. ...+..++.+|+.+|.|+||.|+|+||+.++..
T Consensus 6 ~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (94)
T d1j55a_ 6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (94)
T ss_dssp HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 3466788889987 34554 589999999999876653 233567999999999999999999999987654
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.06 E-value=6.9e-06 Score=81.83 Aligned_cols=82 Identities=16% Similarity=0.267 Sum_probs=51.3
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEeccc----ccCchhhHHHHHHHHHHHHHhcCC--CCeeEEEEEEEcCCeEEE
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKN----KMILPIAVEDVKREVKILQALAGH--ENVVKFYNAFEDDNYVYI 174 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~~~~~E~~~l~~l~~h--pniv~~~~~~~~~~~~~l 174 (577)
.+.||.|....||++.+..+++.|+||.-... ....+........|...|+.+..+ ..+++++.+ ++...++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 44689999999999988777889999964321 000112334456788888877543 345566644 3344578
Q ss_pred EEeccCCCch
Q 008127 175 AMELCEGGEL 184 (577)
Q Consensus 175 v~e~~~~g~L 184 (577)
|||++++..+
T Consensus 109 vmE~L~~~~~ 118 (392)
T d2pula1 109 VMEDLSHLKI 118 (392)
T ss_dssp EECCCTTSEE
T ss_pred EEeccCCccc
Confidence 9999987654
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=98.06 E-value=3.9e-06 Score=62.59 Aligned_cols=59 Identities=17% Similarity=0.283 Sum_probs=47.7
Q ss_pred HHHHHHHhhcC-CCCC-CcccHHHHhhhhcCc--------C----cHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 008127 498 LRSQAAFEKFD-IDRD-GFITPEELRMHTGLK--------G----SIDPLLEEADIDKDGRISLSEFRRLLRT 556 (577)
Q Consensus 498 ~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~~--------~----~~~~~~~~~D~d~dG~i~~~EF~~~l~~ 556 (577)
..+..+|..|- ++|+ +.++..||+.++... . .++.+|+.+|.|+||.|+|+||+.++.+
T Consensus 10 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 82 (83)
T d1xk4c1 10 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 82 (83)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence 45777999984 4443 689999999887631 1 2899999999999999999999998854
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=98.05 E-value=4.1e-06 Score=62.46 Aligned_cols=68 Identities=19% Similarity=0.323 Sum_probs=53.5
Q ss_pred HHHhhhcccccccc-CCC-CCCCCHHHHHHHHHhhCCCC-----ccHHHHHHHHHhhcCCCCcceehhhHHHHHh
Q 008127 416 EELADLRDQFDAID-VDK-NGSISLEEMRQALAKDLPWK-----LKESRVLEILQAIDCNTDGLVDFSEFVAATL 483 (577)
Q Consensus 416 ~~~~~l~~~F~~~D-~d~-dG~i~~~el~~~l~~~~~~~-----~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~~ 483 (577)
..+..+..+|+.+- .+| .++++..||+.+|...++.- ..+..++.+|+.+|.|+||.|+|+||+.++.
T Consensus 7 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 7 RNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence 34567788898884 334 36899999999998766532 2345689999999999999999999997653
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.98 E-value=1.4e-06 Score=70.41 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=61.9
Q ss_pred cccchHHHhhhcccccccc---CCCCCCCCHHHHHHHHHhhCCCC-ccHHHHHHHHHhhcCCCC--------cceehhhH
Q 008127 411 STLDDEELADLRDQFDAID---VDKNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTD--------GLVDFSEF 478 (577)
Q Consensus 411 ~~~~~~~~~~l~~~F~~~D---~d~dG~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~~D~d~d--------g~i~f~EF 478 (577)
+.|++.+++++.+.|+... .+.+|.|+.++|+.++...++.. .++..+++||..+|.|+| |.|+|.||
T Consensus 20 T~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~ef 99 (118)
T d1tuza_ 20 MEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDV 99 (118)
T ss_dssp HHHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHH
T ss_pred cCCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHH
Confidence 4577888889999997543 35789999999999997766654 457899999999999987 88999999
Q ss_pred HHHHhhhh
Q 008127 479 VAATLHVH 486 (577)
Q Consensus 479 ~~~~~~~~ 486 (577)
+.++....
T Consensus 100 v~~LS~l~ 107 (118)
T d1tuza_ 100 SCYFSLLE 107 (118)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 98776544
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=97.97 E-value=5.7e-06 Score=63.37 Aligned_cols=60 Identities=20% Similarity=0.320 Sum_probs=48.9
Q ss_pred HHHHHHHhhc-CCCCC-CcccHHHHhhhhcC-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHhhc
Q 008127 498 LRSQAAFEKF-DIDRD-GFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 557 (577)
Q Consensus 498 ~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~l~~~ 557 (577)
..+..+|..| .++|+ +.|+..||+.++.. .. .++.+|+.+|.|+||.|+|+||+.++.+.
T Consensus 9 ~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (94)
T d1j55a_ 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (94)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 4577799998 44554 58999999998864 11 49999999999999999999999998653
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.96 E-value=7.6e-06 Score=66.02 Aligned_cols=99 Identities=13% Similarity=0.129 Sum_probs=69.4
Q ss_pred CCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhc------CCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHH
Q 008127 431 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID------CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 504 (577)
Q Consensus 431 d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D------~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F 504 (577)
+..+.|+.+||.++.... ..+..+|+.+++.+- ...+|.|++++|..++.......... ..-+..+|
T Consensus 3 ~~~s~l~p~~l~~L~~~T---~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~----~~l~~rlF 75 (118)
T d1tuza_ 3 KERGLISPSDFAQLQKYM---EYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVP----RHLSLALF 75 (118)
T ss_dssp CCCSCSCHHHHHHHHHHH---HHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCC----HHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHc---CCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCch----HHHHHHHH
Confidence 456789999999887442 356678888888883 23589999999998765433322111 12567799
Q ss_pred hhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCCCCCCcccHHHHHHHHhhcc
Q 008127 505 EKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 558 (577)
Q Consensus 505 ~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~~~l~~~~ 558 (577)
+.||+|+++.++ ..++|.|+|.||+..|.-..
T Consensus 76 ~~FD~~~d~~~~----------------------~~~~g~I~f~efv~~LS~l~ 107 (118)
T d1tuza_ 76 QSFETGHCLNET----------------------NVTKDVVCLNDVSCYFSLLE 107 (118)
T ss_dssp HHSCCCCCTTCC----------------------CCCSCCEEHHHHHHHHHHHH
T ss_pred HHHccccccccc----------------------cCCCceeeHHHHHHHHHHHc
Confidence 999999875544 34678899999988876543
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.95 E-value=1.5e-05 Score=74.10 Aligned_cols=75 Identities=13% Similarity=0.120 Sum_probs=53.1
Q ss_pred ecccC-CeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCC-CeeEEEEEEEcCCeEEEEEeccCC
Q 008127 104 LGHGQ-FGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-NVVKFYNAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 104 lG~G~-fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp-niv~~~~~~~~~~~~~lv~e~~~~ 181 (577)
+..|. -+.||++.. ..+..+++|...... ...+..|...++.|..+. .+.+++.+..+++..++||++++|
T Consensus 18 ~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G 90 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG 90 (255)
T ss_dssp CSCTTSSCEEEEEEC-TTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred cCCcccCCeEEEEEe-CCCCEEEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeec
Confidence 44554 468999873 456678889765432 234678888888876432 366788888888899999999998
Q ss_pred Cchh
Q 008127 182 GELL 185 (577)
Q Consensus 182 g~L~ 185 (577)
.++.
T Consensus 91 ~~~~ 94 (255)
T d1nd4a_ 91 QDLL 94 (255)
T ss_dssp EETT
T ss_pred cccc
Confidence 7663
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.80 E-value=3.2e-06 Score=48.07 Aligned_cols=28 Identities=29% Similarity=0.564 Sum_probs=25.0
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHH
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALA 446 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~ 446 (577)
++|.++|+.||+|.||+|+.+||...|+
T Consensus 4 eELae~FRifDkNaDGyiD~eEl~~ilr 31 (34)
T d1ctda_ 4 EELANAFRIFDKNADGYIDIEELGEILR 31 (34)
T ss_dssp HHHHHHHHTTCCSSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHccCCcccccHHHHHHHHH
Confidence 4678889999999999999999999884
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.18 E-value=0.00019 Score=59.20 Aligned_cols=56 Identities=23% Similarity=0.338 Sum_probs=47.5
Q ss_pred HHHHHhhcCCC-CCCcccHHHHhhhhcCcC----cHHHHHHHhCCCCCCcccHHHHHHHHh
Q 008127 500 SQAAFEKFDID-RDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 555 (577)
Q Consensus 500 ~~~~F~~~D~d-~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~l~ 555 (577)
+.--|..+|.| +||+|+..||+.+...+- -+..+++..|.|+||.||+.||..-+.
T Consensus 79 v~W~F~~LD~n~~D~~L~~~EL~~l~~~L~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~ 139 (151)
T d1sraa_ 79 VHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp HHHHHHHHCCTTCSSEECTTTTGGGGSTTSTTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred ceeehhhcCCCCCCCccCHHHHHHHHHhhcCCchHHHHHHHHhcCCCCCcCCHHHHHHHcC
Confidence 34469999999 599999999998764322 489999999999999999999998875
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.14 E-value=0.0009 Score=66.07 Aligned_cols=76 Identities=13% Similarity=0.086 Sum_probs=53.3
Q ss_pred eeeecccCCeEEEEEEEcC-------CCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCeEE
Q 008127 101 GKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~-------~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 173 (577)
++.|+.|---.+|++.... ..+.|.+++.-... ......+|..+++.+..+.-.+++++++.+ .
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~-----~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g 117 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-----TESHLVAESVIFTLLSERHLGPKLYGIFSG----G 117 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-----CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc-----hhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----c
Confidence 3568889999999997643 34567777654221 223567899999999766555688877753 6
Q ss_pred EEEeccCCCchh
Q 008127 174 IAMELCEGGELL 185 (577)
Q Consensus 174 lv~e~~~~g~L~ 185 (577)
+|+||++|..|.
T Consensus 118 ~I~efi~g~~l~ 129 (395)
T d1nw1a_ 118 RLEEYIPSRPLS 129 (395)
T ss_dssp EEECCCCEEECC
T ss_pred eEEEEeccccCC
Confidence 899999886553
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.06 E-value=0.00077 Score=64.66 Aligned_cols=71 Identities=14% Similarity=0.203 Sum_probs=46.3
Q ss_pred CCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCCC-CeeEEE-----EEEEcCCeEEEEEeccCC
Q 008127 108 QFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-NVVKFY-----NAFEDDNYVYIAMELCEG 181 (577)
Q Consensus 108 ~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~hp-niv~~~-----~~~~~~~~~~lv~e~~~~ 181 (577)
.--.||++.. .+|..|++|+...... ..+++..|+..+..|..+. -++..+ ..+...+..+.|+++++|
T Consensus 34 ~EN~vy~v~~-~dg~~~VlK~~rp~~~----s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G 108 (325)
T d1zyla1 34 YENRVYQFQD-EDRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 108 (325)
T ss_dssp SSSEEEEECC-TTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred ccceeEEEEc-CCCCEEEEEEeCCCCC----CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCC
Confidence 3457999973 5788999998765422 3466788999988886221 111111 123446778999999987
Q ss_pred Cc
Q 008127 182 GE 183 (577)
Q Consensus 182 g~ 183 (577)
..
T Consensus 109 ~~ 110 (325)
T d1zyla1 109 RQ 110 (325)
T ss_dssp EE
T ss_pred cC
Confidence 54
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.13 E-value=0.008 Score=56.83 Aligned_cols=155 Identities=15% Similarity=0.079 Sum_probs=73.8
Q ss_pred eeeecccCCeEEEEEEEcCCCCEEEEEEecccccCchhhHHHHHHHHHHHHHhcCC----CCeeEEE---EEEEcCCeEE
Q 008127 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH----ENVVKFY---NAFEDDNYVY 173 (577)
Q Consensus 101 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~E~~~l~~l~~h----pniv~~~---~~~~~~~~~~ 173 (577)
.+.|..|---+.|++... .| .+++|+..... ..+.+..|+.++..|.++ |..+... .+....+..+
T Consensus 23 ~~~i~~G~~N~ny~v~t~-~g-~yVLri~~~~~-----~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~~ 95 (316)
T d2ppqa1 23 YKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPA 95 (316)
T ss_dssp EEEECC---EEEEEEEES-SC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEE
T ss_pred eecCCCCcccCeEEEEEC-CC-cEEEEEcCCCC-----CHHHHHHHHHHHHhhhhccccccccceecCCCcceeeecccc
Confidence 345667777889998733 34 58899875432 223456677777777522 2222110 0112245566
Q ss_pred EEEeccCCCchhHHHHHHhhhhhhh------------------------hhHHHhhhcCCCCCHHHHHHHHHHHHHHHHH
Q 008127 174 IAMELCEGGELLDRILAKMISTTLT------------------------SAWFLAIRKDSRYTEKDAAVVVRQMLRVAAE 229 (577)
Q Consensus 174 lv~e~~~~g~L~~~l~~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~~~~i~~qil~~l~~ 229 (577)
.++.+..|......-.......... ..+..................+..+...+.-
T Consensus 96 ~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 175 (316)
T d2ppqa1 96 ALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAA 175 (316)
T ss_dssp EEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHH
T ss_pred eeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhHHHHHHHHHHhhhc
Confidence 7777776654321000000000000 0000000000111111122223333333333
Q ss_pred HHh----cCceeccCCCCcEEeecCCCCCCeeEEecCCCc
Q 008127 230 CHL----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 265 (577)
Q Consensus 230 LH~----~~iiHrDlKp~NILl~~~~~~~~vkl~DFGla~ 265 (577)
.+. .|+||+|+.++||+++. +..+-|+||+.+.
T Consensus 176 ~~~~~L~~giIHgDl~~dNvl~~~---~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 176 HWPKDLPAGVIHADLFQDNVFFLG---DELSGLIDFYFAC 212 (316)
T ss_dssp HCCCSSCEEEECSCCCGGGEEEET---TEEEEECCCTTCE
T ss_pred cCccccccccccCCcchhhhhccc---ccceeEecccccc
Confidence 332 47999999999999983 4455799999875
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.10 E-value=0.00049 Score=56.70 Aligned_cols=56 Identities=21% Similarity=0.328 Sum_probs=45.8
Q ss_pred ccccccCC-CCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhhHHHHH
Q 008127 424 QFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 424 ~F~~~D~d-~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~ 482 (577)
.|..+|.| .||.|+..||..+.+ +..+.+.=+..+++.+|.|+||.|++.|+...+
T Consensus 82 ~F~~LD~n~~D~~L~~~EL~~l~~---~L~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf 138 (151)
T d1sraa_ 82 QFGQLDQHPIDGYLSHTELAPLRA---PLIPMEHCTTRFFETCDLDNDKYIALDEWAGCF 138 (151)
T ss_dssp HHHHHCCTTCSSEECTTTTGGGGS---TTSTTGGGHHHHHHHHCTTCSSSEEHHHHHHHT
T ss_pred ehhhcCCCCCCCccCHHHHHHHHH---hhcCCchHHHHHHHHhcCCCCCcCCHHHHHHHc
Confidence 39999999 599999999988642 223445557889999999999999999998644
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.08 E-value=0.034 Score=41.86 Aligned_cols=65 Identities=12% Similarity=0.173 Sum_probs=50.4
Q ss_pred hhhccccccccCCCCCCCCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCC----CcceehhhHHHHHhh
Q 008127 419 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNT----DGLVDFSEFVAATLH 484 (577)
Q Consensus 419 ~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~D~d~----dg~i~f~EF~~~~~~ 484 (577)
.++..+|..+-. +.+.++.++|..+|...-+. ..+++.+..+|..+..+. .|.+++++|...+..
T Consensus 8 ~ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S 77 (94)
T d1qasa1 8 AEIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS 77 (94)
T ss_dssp HHHHHHHHHHHT-TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHS
T ss_pred HHHHHHHHHHhC-CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcC
Confidence 456777888744 44689999999999765553 467888999999998764 477999999987654
|
| >d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: alpha-Actinin species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.03 E-value=0.11 Score=36.18 Aligned_cols=57 Identities=18% Similarity=0.211 Sum_probs=46.1
Q ss_pred HHHHHHHhhcCCCCCCcccHHHHhhhhcCcCcHHHHHHHhCC-----CCCCcccHHHHHHHHhh
Q 008127 498 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADI-----DKDGRISLSEFRRLLRT 556 (577)
Q Consensus 498 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~-----d~dG~i~~~EF~~~l~~ 556 (577)
+.+..+|+.+ .++..+|+.+||++.|... +++.++..|-. -..|..+|..|.+.|-+
T Consensus 8 Eqv~~aFr~l-A~~KpyVT~~dL~~~L~pe-qaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~g 69 (73)
T d1h8ba_ 8 EQVIASFRIL-ASDKPYILAEELRRELPPD-QAQYCIKRMPAYSGPGSVPGALDYAAFSSALYG 69 (73)
T ss_dssp HHHHHHHHHH-TTSCSSBCHHHHHHHSCHH-HHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTC
T ss_pred HHHHHHHHHH-hCCCCeeCHHHHHhhcCHH-HHHHHHHHCcccCCCCCCCCcccHHHHHHHHhc
Confidence 4688899999 5789999999999988754 57888888743 24778999999988865
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.01 E-value=0.14 Score=38.30 Aligned_cols=59 Identities=17% Similarity=0.157 Sum_probs=45.9
Q ss_pred HHHHHHhhcCCCCCCcccHHHHhhhhcCcC--------cHHHHHHHhCCCC----CCcccHHHHHHHHhhcc
Q 008127 499 RSQAAFEKFDIDRDGFITPEELRMHTGLKG--------SIDPLLEEADIDK----DGRISLSEFRRLLRTAS 558 (577)
Q Consensus 499 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--------~~~~~~~~~D~d~----dG~i~~~EF~~~l~~~~ 558 (577)
.+..+|+.+- ++.+.|+.++|..+|.... .+..+|..+..+. .|.+++++|..+|....
T Consensus 9 ei~~if~~ys-~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~~ 79 (94)
T d1qasa1 9 EIDRAFEEAA-GSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD 79 (94)
T ss_dssp HHHHHHHHHH-TTSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSST
T ss_pred HHHHHHHHHh-CCCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCcc
Confidence 5677899884 4457899999999997532 2688888887664 47799999999997654
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=89.87 E-value=0.63 Score=30.86 Aligned_cols=71 Identities=15% Similarity=0.175 Sum_probs=56.9
Q ss_pred ccchHHHhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhc-CCC-CcceehhhHHHHHh
Q 008127 412 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID-CNT-DGLVDFSEFVAATL 483 (577)
Q Consensus 412 ~~~~~~~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D-~d~-dg~i~f~EF~~~~~ 483 (577)
.+.+++..+-.++|+.||.|...--...+-..+|.+ +|...+..+.+.++++.- ..+ ...|.-+|++..+.
T Consensus 7 algpeekdecmkifdifdrnaeniapvsdtmdmltk-lgqtytkreteaimkeargpkgdkknigpeewltlcs 79 (86)
T d1j7qa_ 7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTK-LGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCS 79 (86)
T ss_dssp CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHH-TSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHH
T ss_pred ccCchhHHHHHHHHHHHhccccccCCcchHHHHHHH-hhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHH
Confidence 345677788889999999999998999999999965 999999999999998763 223 23588888887654
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=89.53 E-value=0.23 Score=33.35 Aligned_cols=51 Identities=20% Similarity=0.348 Sum_probs=30.2
Q ss_pred cCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhh
Q 008127 466 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 524 (577)
Q Consensus 466 D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l 524 (577)
|.|+||.|+..+.+.+.......... .+ ..|...|.|+||.|+..++..+.
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~-~~-------~~~~aaDvn~Dg~i~i~D~~~l~ 52 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITL-TD-------DAKARADVDKNGSINAADVLLLS 52 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCC-CH-------HHHHHHCTTCSSCCSHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCC-Ch-------hhhhccccCCCCCCCHHHHHHHH
Confidence 56777777777776544322221111 11 14667788888888887776543
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=88.96 E-value=0.41 Score=32.03 Aligned_cols=50 Identities=16% Similarity=0.278 Sum_probs=38.8
Q ss_pred cCCCCCCCCHHHHHHHHHhhCCCC-ccHHHHHHHHHhhcCCCCcceehhhHHHHH
Q 008127 429 DVDKNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAAT 482 (577)
Q Consensus 429 D~d~dG~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~~D~d~dg~i~f~EF~~~~ 482 (577)
|.|+||.|+..++.......++.. +++. -+...|.|+||.|+..+.....
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~~~~----~~~aaDvn~Dg~i~i~D~~~l~ 52 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITLTDD----AKARADVDKNGSINAADVLLLS 52 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCCHH----HHHHHCTTCSSCCSHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCChh----hhhccccCCCCCCCHHHHHHHH
Confidence 789999999999988875556643 3432 3577899999999998887543
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=88.35 E-value=0.054 Score=38.22 Aligned_cols=61 Identities=21% Similarity=0.318 Sum_probs=39.9
Q ss_pred CCCCCCcccHHHHhhhhcCc-Cc-HHHHHHHhCCCCCCcccHHHHHHHHhhcccCCCCCCCCCC
Q 008127 508 DIDRDGFITPEELRMHTGLK-GS-IDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPS 569 (577)
Q Consensus 508 D~d~~G~I~~~El~~~l~~~-~~-~~~~~~~~D~d~dG~i~~~EF~~~l~~~~~~~~~~~~~~~ 569 (577)
|.|+||.|+..++..++... +. -..-+..+|.|+||+|+..++..+.+-.. +....=|..+
T Consensus 8 DvN~DG~Vd~~D~~~~~~~i~~~~~~~~~~~aDvn~DG~Id~~D~~~l~~~il-g~i~~lPv~~ 70 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKRYVLRSGISINTDNADLNEDGRVNSTDLGILKRYIL-KEIDTLPYKN 70 (71)
T ss_dssp CSSSSSBSSGGGHHHHHHHHHCSCSCCCGGGTCSSSSSSCSSHHHHHHHHHTT-TTTTTCCCCC
T ss_pred ccCCCCCCcHHHHHHHHHHHcCCCCcCCCcceecCCCCCcCHHHHHHHHHHHH-CcCccCCCCC
Confidence 88999999999987654322 10 01112357999999999999998776532 3333334433
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=86.47 E-value=0.29 Score=34.26 Aligned_cols=50 Identities=24% Similarity=0.302 Sum_probs=33.5
Q ss_pred cCCCCcceehhhHHHHHhhhhhhcccccHHHHHHHHHHHhhcCCCCCCcccHHHHhhhhc
Q 008127 466 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 525 (577)
Q Consensus 466 D~d~dg~i~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 525 (577)
|.|+||.|+..+...++........ .. -+...|.|+||.|+..++..+.+
T Consensus 8 DvN~DG~Vd~~D~~~~~~~i~~~~~-~~---------~~~~aDvn~DG~Id~~D~~~l~~ 57 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKRYVLRSGI-SI---------NTDNADLNEDGRVNSTDLGILKR 57 (71)
T ss_dssp CSSSSSBSSGGGHHHHHHHHHCSCS-CC---------CGGGTCSSSSSSCSSHHHHHHHH
T ss_pred ccCCCCCCcHHHHHHHHHHHcCCCC-cC---------CCcceecCCCCCcCHHHHHHHHH
Confidence 7788999998888765443222111 11 13457999999999999975543
|
| >d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: alpha-Actinin species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.20 E-value=0.35 Score=33.60 Aligned_cols=57 Identities=18% Similarity=0.321 Sum_probs=43.9
Q ss_pred HhhhccccccccCCCCCCCCHHHHHHHHHhhCCCCccHHHHHHHHHhhcC----C-CCcceehhhHHHHHh
Q 008127 418 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC----N-TDGLVDFSEFVAATL 483 (577)
Q Consensus 418 ~~~l~~~F~~~D~d~dG~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~D~----d-~dg~i~f~EF~~~~~ 483 (577)
.+++.+.|+.+ .+++.+|+.+||...| +.++++.+++.+-. + ..|..||..|...+.
T Consensus 7 aEqv~~aFr~l-A~~KpyVT~~dL~~~L--------~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~ 68 (73)
T d1h8ba_ 7 AEQVIASFRIL-ASDKPYILAEELRREL--------PPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY 68 (73)
T ss_dssp HHHHHHHHHHH-TTSCSSBCHHHHHHHS--------CHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred HHHHHHHHHHH-hCCCCeeCHHHHHhhc--------CHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHh
Confidence 45678889988 7789999999998765 35678888888743 2 477899999987654
|