Citrus Sinensis ID: 008139
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 576 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ZN70 | 506 | Exopolyphosphatase OS=Pse | yes | no | 0.755 | 0.859 | 0.270 | 2e-37 | |
| A8G827 | 498 | Guanosine-5'-triphosphate | yes | no | 0.734 | 0.849 | 0.279 | 3e-36 | |
| C6DHF6 | 498 | Guanosine-5'-triphosphate | yes | no | 0.730 | 0.845 | 0.272 | 2e-33 | |
| A8ACT2 | 494 | Guanosine-5'-triphosphate | yes | no | 0.734 | 0.856 | 0.286 | 9e-33 | |
| B2VG72 | 494 | Guanosine-5'-triphosphate | yes | no | 0.682 | 0.795 | 0.274 | 1e-32 | |
| Q9KU08 | 500 | Exopolyphosphatase OS=Vib | yes | no | 0.817 | 0.942 | 0.255 | 2e-32 | |
| B1JQ12 | 498 | Guanosine-5'-triphosphate | no | no | 0.725 | 0.839 | 0.276 | 3e-32 | |
| Q66G20 | 498 | Guanosine-5'-triphosphate | no | no | 0.725 | 0.839 | 0.276 | 3e-32 | |
| A4TRC9 | 498 | Guanosine-5'-triphosphate | no | no | 0.725 | 0.839 | 0.276 | 3e-32 | |
| A9R8H6 | 498 | Guanosine-5'-triphosphate | no | no | 0.725 | 0.839 | 0.276 | 3e-32 |
| >sp|Q9ZN70|PPX_PSEAE Exopolyphosphatase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=ppx PE=3 SV=1 | Back alignment and function desciption |
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Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 232/480 (48%), Gaps = 45/480 (9%)
Query: 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESL 72
L A++D+G++SF L + +A +G+ ++ L + V L L ++S ++ R ++ L
Sbjct: 15 PLIAALDLGSNSFHLCLAKANIHGEVRILERLGEKVQLAAGLDEERNLSEEATQRGLDCL 74
Query: 73 LMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYM 132
F I + + R VAT A+R A N+ +F+ E +G V+V++G +EA+ +Y+
Sbjct: 75 RRFAQFIS--GMPQGSVRVVATNALREARNRSDFIRRAEEVLGHPVEVISGREEARLIYL 132
Query: 133 GVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNFEEV 192
GV +P L DIGGGSTEF+IG+ + ES+ +G VS ++++ G
Sbjct: 133 GVANSMPDSGGRRLVSDIGGGSTEFIIGQGFESELRESLQMGCVSYTQRY-FRDGKITPA 191
Query: 193 LKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDFGGC 252
+ Y + G+ ++ G++ AVG+SGTIRA+ A+ +G + G+
Sbjct: 192 RYAQAYTAARLELMGIENSLRRLGWQQAVGASGTIRAVALAIKAGGHGN-----GEISPD 246
Query: 253 KRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEE 312
W LK V +L G+VE++ E R AG +L+ IF+ L +E+
Sbjct: 247 GLAW------LKRKVLKL-----GDVEKLDLEGIKPDRRTIFPAGLAILEAIFDALELEQ 295
Query: 313 MEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRF--NNKKRVKAGAQCASIA 370
M S L EGV+ D + G + + R R++ L R+ + ++ + A+ +
Sbjct: 296 MVHSEGALREGVLYDLV-----GRHQHEDVRERTISSLMQRYHVDPEQASRVEAKALKVL 350
Query: 371 KDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMN 430
++ + +L+ +DL L +H IG + YHK ++I +
Sbjct: 351 AEVGDAWELNGELH------------RDL--LSWGARVHEIGLDIAHYHYHKHGAYLIEH 396
Query: 431 GDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490
D L G+S + ++++LL R HR+ P L EF E+ + R LC ++R +++
Sbjct: 397 SD-LAGFSRQDQQMLSLLVRGHRRNIPADK---LAEFAEEGDKLVR-LCIVLRFAILFHH 451
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Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate. Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 1EC: 1 |
| >sp|A8G827|GPPA_SERP5 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Serratia proteamaculans (strain 568) GN=gppA PE=3 SV=1 | Back alignment and function description |
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| >sp|C6DHF6|GPPA_PECCP Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gppA PE=3 SV=1 | Back alignment and function description |
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| >sp|A8ACT2|GPPA_CITK8 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gppA PE=3 SV=1 | Back alignment and function description |
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| >sp|B2VG72|GPPA_ERWT9 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=gppA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9KU08|PPX_VIBCH Exopolyphosphatase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ppx PE=3 SV=2 | Back alignment and function description |
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| >sp|B1JQ12|GPPA_YERPY Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=gppA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q66G20|GPPA_YERPS Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=gppA PE=3 SV=1 | Back alignment and function description |
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| >sp|A4TRC9|GPPA_YERPP Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Yersinia pestis (strain Pestoides F) GN=gppA PE=3 SV=1 | Back alignment and function description |
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| >sp|A9R8H6|GPPA_YERPG Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=gppA PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 576 | ||||||
| 225450640 | 572 | PREDICTED: exopolyphosphatase [Vitis vin | 0.930 | 0.937 | 0.583 | 0.0 | |
| 255542850 | 615 | Guanosine-5'-triphosphate,3'-diphosphate | 0.895 | 0.839 | 0.574 | 1e-168 | |
| 147856441 | 545 | hypothetical protein VITISV_019566 [Viti | 0.880 | 0.930 | 0.554 | 1e-166 | |
| 224123694 | 495 | predicted protein [Populus trichocarpa] | 0.852 | 0.991 | 0.617 | 1e-165 | |
| 334182412 | 600 | uncharacterized protein [Arabidopsis tha | 0.918 | 0.881 | 0.570 | 1e-160 | |
| 3249102 | 568 | Similar to exopolyphosphatase gb|1653871 | 0.920 | 0.933 | 0.557 | 1e-158 | |
| 297849216 | 1014 | pentatricopeptide repeat-containing prot | 0.897 | 0.509 | 0.551 | 1e-154 | |
| 170792416 | 520 | Ppx-GppA phosphatase protein (exopolypho | 0.871 | 0.965 | 0.527 | 1e-143 | |
| 170792414 | 564 | Ppx-GppA phosphatase protein (exopolypho | 0.923 | 0.943 | 0.484 | 1e-141 | |
| 170792412 | 422 | Ppx-GppA phosphatase protein [Eutrema sa | 0.715 | 0.976 | 0.582 | 1e-127 |
| >gi|225450640|ref|XP_002278296.1| PREDICTED: exopolyphosphatase [Vitis vinifera] gi|296089751|emb|CBI39570.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/547 (58%), Positives = 420/547 (76%), Gaps = 11/547 (2%)
Query: 11 PQTLFASIDMGTSSFKLLIIRAYPN-GKFLTIDTLKQPVILGRDLSSSCSISTQSQARSV 69
P LFASIDMGT+SFKLL ++ P+ GKFL + LK+PV+LGR +S+ + + SQ R++
Sbjct: 13 PTNLFASIDMGTNSFKLLTVQFNPSTGKFLHLHRLKEPVVLGRQAASA-AAAVDSQLRAI 71
Query: 70 ESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKF 129
E+L FR+ +Q+H I R R VATAAVR A N+ EF+ VR++VGFEV+VL+GE+EA+
Sbjct: 72 EALKEFRNFLQNHEIHRH--RTVATAAVREAGNQAEFLRRVRDEVGFEVEVLSGEEEARL 129
Query: 130 VYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNF 189
+Y+G LQFLP++++ L +DIGGGSTEF++G++GK +F SV LGHV+L++KF N
Sbjct: 130 IYLGALQFLPIYEKTALVIDIGGGSTEFLLGQKGKAIFGTSVKLGHVNLTQKFV----NH 185
Query: 190 EEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDF 249
E+L+MR ++R ++ + G+VEK+K GFE+AVGSSGT+++IEKA+ SG+ R+ V N G
Sbjct: 186 NEILQMRSHIRSILRQCGIVEKIKHHGFEIAVGSSGTVQSIEKAIFSGFSRNVVSNDGAL 245
Query: 250 -GGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELL 308
G RDWR SR EL+ +VERLC GG +ER RR+RFFKRRSEFIVAGAVLLDEIF +L
Sbjct: 246 CGDLGRDWRFSREELRILVERLCGGGGEAIERARRDRFFKRRSEFIVAGAVLLDEIFAML 305
Query: 309 GIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCAS 368
IEEMEVSGY LGEGVVA+ L +V D YD NANARW SVVRLA RF KK++ +QCA+
Sbjct: 306 DIEEMEVSGYALGEGVVAEMLLQVCDNYDFNANARWGSVVRLATRFLGKKKMGTASQCAN 365
Query: 369 IAKDIFEGLRKCDKL--YNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCH 426
I K IFEGLRKCD L NQVKL S DKDLEYLEAAC+LHNIG T +KGYHKQSC+
Sbjct: 366 ITKVIFEGLRKCDTLAETENQVKLPVSLNDKDLEYLEAACVLHNIGLITGEKGYHKQSCN 425
Query: 427 IIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSV 486
IIMNGDHLYGYST+E+KLIALL R HRKKFP+ +H L+EF ++ K+KF++LCAI+R+S+
Sbjct: 426 IIMNGDHLYGYSTEEVKLIALLARHHRKKFPKPNHGSLKEFSKEVKEKFKMLCAIIRVSI 485
Query: 487 ILQQNDCVNLRGVDFFHSYEGFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKI 546
+Q++ +N++G++F S EGFKL++ E +DQ LPG QP + EAEL KEL HF+ +
Sbjct: 486 AVQKHRGLNIQGMEFSRSSEGFKLIVSETKDQSLLPGIVQPLAEGDEAELRKELGHFEMV 545
Query: 547 FKQELLV 553
F+++L +
Sbjct: 546 FQEKLSI 552
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542850|ref|XP_002512488.1| Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase, putative [Ricinus communis] gi|223548449|gb|EEF49940.1| Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|147856441|emb|CAN82841.1| hypothetical protein VITISV_019566 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224123694|ref|XP_002330185.1| predicted protein [Populus trichocarpa] gi|222871641|gb|EEF08772.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|334182412|ref|NP_001184946.1| uncharacterized protein [Arabidopsis thaliana] gi|332190291|gb|AEE28412.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|3249102|gb|AAC24085.1| Similar to exopolyphosphatase gb|1653871 from Synechocystis sp. gb|D90917 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297849216|ref|XP_002892489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297338331|gb|EFH68748.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|170792416|emb|CAP08388.2| Ppx-GppA phosphatase protein (exopolyphosphatase) [Lupinus albus] | Back alignment and taxonomy information |
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| >gi|170792414|emb|CAP08387.1| Ppx-GppA phosphatase protein (exopolyphosphatase) [Capsicum annuum] | Back alignment and taxonomy information |
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| >gi|170792412|emb|CAP08386.1| Ppx-GppA phosphatase protein [Eutrema salsugineum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 576 | ||||||
| UNIPROTKB|Q87UP7 | 500 | ppx "Exopolyphosphatase" [Pseu | 0.401 | 0.462 | 0.266 | 9.5e-25 | |
| UNIPROTKB|Q9KU08 | 500 | ppx "Exopolyphosphatase" [Vibr | 0.373 | 0.43 | 0.283 | 4e-24 | |
| TIGR_CMR|VC_0722 | 500 | VC_0722 "exopolyphosphatase" [ | 0.373 | 0.43 | 0.283 | 4e-24 | |
| UNIPROTKB|P0AFL6 | 513 | ppx "exopolyphosphatase monome | 0.383 | 0.430 | 0.268 | 4.3e-23 | |
| TIGR_CMR|SO_2185 | 518 | SO_2185 "exopolyphosphatase" [ | 0.385 | 0.428 | 0.277 | 2.3e-21 | |
| UNIPROTKB|P25552 | 494 | gpp "Gpp" [Escherichia coli K- | 0.383 | 0.447 | 0.275 | 1.2e-18 | |
| TIGR_CMR|SO_0408 | 306 | SO_0408 "guanosine-5-triphosph | 0.376 | 0.709 | 0.243 | 1e-17 | |
| UNIPROTKB|Q74A32 | 513 | gppA-2 "PppGpp 5'-phosphohydro | 0.593 | 0.666 | 0.245 | 1.2e-15 | |
| TIGR_CMR|GSU_2559 | 513 | GSU_2559 "exopolyphosphatase, | 0.593 | 0.666 | 0.245 | 1.2e-15 | |
| UNIPROTKB|Q9KV53 | 497 | gppA "Guanosine-5'-triphosphat | 0.381 | 0.442 | 0.258 | 1.4e-15 |
| UNIPROTKB|Q87UP7 ppx "Exopolyphosphatase" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
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Score = 226 (84.6 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 63/236 (26%), Positives = 114/236 (48%)
Query: 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLXXXXXXXXXXXXXXVESL 72
+L A+ID+G++SF +++ +A G+ ++ L + V L + ++ L
Sbjct: 10 SLIAAIDLGSNSFHMVVAKAN-QGEIRILERLGEKVQLAAGIDEERQLTEESMQRGLDCL 68
Query: 73 LMFRDIIQSHNISRDHXXXXXXXXXXXXENKDEFVECVREKVGFEVDVLTGEQEAKFVYM 132
F +I + + N+++F+ E +G V+V++G +EA+ +Y+
Sbjct: 69 KRFAQLI--NGLPPGAVRIVGTNALREARNRNDFIHRAEEILGHPVEVISGREEARLIYL 126
Query: 133 GVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNFEEV 192
GV L L DIGGGSTEF+IG+R + + ES+ +G VS ++++ G
Sbjct: 127 GVSHTLADTPGKRLVADIGGGSTEFIIGQRFEPLLRESLQMGCVSFTQRYFR-DGKVTPA 185
Query: 193 LKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAV-VSGYDRDFVDNVG 247
+ Y + + + ++ A+GSSGTIRAI A+ +GY V+ G
Sbjct: 186 RYAQAYTAARLEIMSIEHALHRLKWDEAIGSSGTIRAIGLALKANGYGAGEVNAEG 241
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| UNIPROTKB|Q9KU08 ppx "Exopolyphosphatase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
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| TIGR_CMR|VC_0722 VC_0722 "exopolyphosphatase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P0AFL6 ppx "exopolyphosphatase monomer" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
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| TIGR_CMR|SO_2185 SO_2185 "exopolyphosphatase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P25552 gpp "Gpp" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
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| TIGR_CMR|SO_0408 SO_0408 "guanosine-5-triphosphate,3-diphosphate pyrophosphatase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q74A32 gppA-2 "PppGpp 5'-phosphohydrolase and exopolyphosphatase, HD domain-containing" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
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| TIGR_CMR|GSU_2559 GSU_2559 "exopolyphosphatase, putative" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9KV53 gppA "Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.6.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.6.1.40 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.133.183.1 | hypothetical protein (495 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | eugene3.135950002 | • | • | • | 0.522 | ||||||
 | eugene3.143650001 | • | 0.459 | ||||||||
 | eugene3.164370001 | • | • | 0.428 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 576 | |||
| COG0248 | 492 | COG0248, GppA, Exopolyphosphatase [Nucleotide tran | 3e-95 | |
| TIGR03706 | 300 | TIGR03706, exo_poly_only, exopolyphosphatase | 5e-60 | |
| PRK11031 | 496 | PRK11031, PRK11031, guanosine pentaphosphate phosp | 8e-40 | |
| pfam02541 | 285 | pfam02541, Ppx-GppA, Ppx/GppA phosphatase family | 5e-39 | |
| PRK10854 | 513 | PRK10854, PRK10854, exopolyphosphatase; Provisiona | 1e-34 |
| >gnl|CDD|223326 COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 299 bits (768), Expect = 3e-95
Identities = 155/485 (31%), Positives = 250/485 (51%), Gaps = 56/485 (11%)
Query: 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLL 73
A+ID+G++SF+L++ P G F + K+ V LG L ++ ++S ++ R++ +L
Sbjct: 4 RVAAIDLGSNSFRLVVAEITP-GSFQVLFREKRIVRLGEGLDATGNLSEEAIERALSALK 62
Query: 74 MFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMG 133
F +++ + R VAT+A+R A N DEF+ V +++G ++V++GE+EA+ +Y+G
Sbjct: 63 RFAELLDGFGA--EEVRVVATSALRDAPNGDEFLARVEKELGLPIEVISGEEEARLIYLG 120
Query: 134 VLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSG-NFEEV 192
V LP L +DIGGGSTE V+G ++ S+ LG V L+E+F + E
Sbjct: 121 VASTLPRKGD-GLVIDIGGGSTELVLGDNFEIGLLISLPLGCVRLTERFFPDDPISEENF 179
Query: 193 LKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEK--AVVSGYDRDFVDNVGDFG 250
K R+ VR + E ++ + +G+ VG+SGTIRA+ K Y +
Sbjct: 180 AKARDAVREELEEI--AKEYRIAGWAGLVGTSGTIRALAKLHMAQGSYPLRVLHGY---- 233
Query: 251 GCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFF---KRRSEFIVAGAVLLDEIFEL 307
++ EL+ ++ERL + R + K R++ I+AGA +L+ +FE
Sbjct: 234 ------EITAEELEKLLERLI-----RMTSEERLKLEGLSKDRADVILAGAAILEAVFEA 282
Query: 308 LGIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFN----NKKRVKAG 363
L IE M VS GL EGV+ D L + + R RS++ LA+R+ KRV
Sbjct: 283 LSIERMIVSDGGLREGVLYDLLLR-----FEAEDIRKRSLLELALRYLIDLAQAKRVA-- 335
Query: 364 AQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQ 423
+ +L++ + L+ E+ + LEAA +LH IG S G+HK
Sbjct: 336 --------------KLALELFDQLLALLKIDEEAEERLLEAAAMLHEIGLNISHSGHHKH 381
Query: 424 SCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVR 483
S +II N D L G+S +E L+ALL R+HRK A F ++ + R L ++R
Sbjct: 382 SAYIIRNSD-LPGFSHEERLLLALLARYHRKAVKLKKLA---PFSKKKLKSVRRLLGLLR 437
Query: 484 LSVIL 488
L+VIL
Sbjct: 438 LAVIL 442
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Length = 492 |
| >gnl|CDD|234320 TIGR03706, exo_poly_only, exopolyphosphatase | Back alignment and domain information |
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| >gnl|CDD|236826 PRK11031, PRK11031, guanosine pentaphosphate phosphohydrolase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|202276 pfam02541, Ppx-GppA, Ppx/GppA phosphatase family | Back alignment and domain information |
|---|
| >gnl|CDD|182781 PRK10854, PRK10854, exopolyphosphatase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 576 | |||
| PRK11031 | 496 | guanosine pentaphosphate phosphohydrolase; Provisi | 100.0 | |
| PRK10854 | 513 | exopolyphosphatase; Provisional | 100.0 | |
| COG0248 | 492 | GppA Exopolyphosphatase [Nucleotide transport and | 100.0 | |
| TIGR03706 | 300 | exo_poly_only exopolyphosphatase. It appears that | 100.0 | |
| PF02541 | 285 | Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I | 100.0 | |
| PRK15080 | 267 | ethanolamine utilization protein EutJ; Provisional | 99.66 | |
| PF01150 | 434 | GDA1_CD39: GDA1/CD39 (nucleoside phosphatase) fami | 98.86 | |
| TIGR02529 | 239 | EutJ ethanolamine utilization protein EutJ family | 98.68 | |
| KOG1386 | 501 | consensus Nucleoside phosphatase [Nucleotide trans | 98.35 | |
| PRK09472 | 420 | ftsA cell division protein FtsA; Reviewed | 98.35 | |
| KOG1385 | 453 | consensus Nucleoside phosphatase [Nucleotide trans | 98.33 | |
| PF01966 | 122 | HD: HD domain; InterPro: IPR006674 This domain is | 98.24 | |
| TIGR01174 | 371 | ftsA cell division protein FtsA. This bacterial ce | 98.04 | |
| TIGR01175 | 348 | pilM type IV pilus assembly protein PilM. This pro | 98.01 | |
| COG0849 | 418 | ftsA Cell division ATPase FtsA [Cell division and | 97.8 | |
| cd00077 | 145 | HDc Metal dependent phosphohydrolases with conserv | 97.76 | |
| smart00471 | 124 | HDc Metal dependent phosphohydrolases with conserv | 97.75 | |
| TIGR00295 | 164 | conserved hypothetical protein TIGR00295. This set | 97.53 | |
| PF06723 | 326 | MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba | 97.46 | |
| PF06277 | 473 | EutA: Ethanolamine utilisation protein EutA; Inter | 97.26 | |
| PRK10719 | 475 | eutA reactivating factor for ethanolamine ammonia | 97.23 | |
| TIGR03401 | 228 | cyanamide_fam HD domain protein, cyanamide hydrata | 97.06 | |
| PRK13928 | 336 | rod shape-determining protein Mbl; Provisional | 97.06 | |
| PF11104 | 340 | PilM_2: Type IV pilus assembly protein PilM;; PDB: | 97.0 | |
| PRK13930 | 335 | rod shape-determining protein MreB; Provisional | 96.83 | |
| PRK13929 | 335 | rod-share determining protein MreBH; Provisional | 96.75 | |
| COG4972 | 354 | PilM Tfp pilus assembly protein, ATPase PilM [Cell | 96.68 | |
| PRK12703 | 339 | tRNA 2'-O-methylase; Reviewed | 96.59 | |
| TIGR00904 | 333 | mreB cell shape determining protein, MreB/Mrl fami | 96.41 | |
| TIGR00277 | 80 | HDIG uncharacterized domain HDIG. This domain is f | 96.36 | |
| PRK13927 | 334 | rod shape-determining protein MreB; Provisional | 96.36 | |
| TIGR00241 | 248 | CoA_E_activ CoA-substrate-specific enzyme activase | 96.32 | |
| TIGR03319 | 514 | YmdA_YtgF conserved hypothetical protein YmdA/YtgF | 96.27 | |
| PRK12705 | 508 | hypothetical protein; Provisional | 96.13 | |
| PRK12704 | 520 | phosphodiesterase; Provisional | 96.05 | |
| PRK07152 | 342 | nadD putative nicotinate-nucleotide adenylyltransf | 96.04 | |
| COG3294 | 269 | HD supefamily hydrolase [General function predicti | 95.92 | |
| TIGR01596 | 177 | cas3_HD CRISPR-associated endonuclease Cas3-HD. CR | 95.66 | |
| PRK00106 | 535 | hypothetical protein; Provisional | 95.64 | |
| COG4820 | 277 | EutJ Ethanolamine utilization protein, possible ch | 95.55 | |
| smart00268 | 373 | ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki | 95.52 | |
| TIGR00488 | 158 | putative HD superfamily hydrolase of NAD metabolis | 95.48 | |
| PRK10119 | 231 | putative hydrolase; Provisional | 95.44 | |
| PRK00227 | 693 | glnD PII uridylyl-transferase; Provisional | 95.29 | |
| cd00012 | 371 | ACTIN Actin; An ubiquitous protein involved in the | 95.24 | |
| PRK03381 | 774 | PII uridylyl-transferase; Provisional | 95.17 | |
| COG1078 | 421 | HD superfamily phosphohydrolases [General function | 95.06 | |
| COG1077 | 342 | MreB Actin-like ATPase involved in cell morphogene | 95.01 | |
| PTZ00280 | 414 | Actin-related protein 3; Provisional | 94.96 | |
| PRK05007 | 884 | PII uridylyl-transferase; Provisional | 94.34 | |
| TIGR02692 | 466 | tRNA_CCA_actino tRNA adenylyltransferase. The enzy | 94.24 | |
| PRK00275 | 895 | glnD PII uridylyl-transferase; Provisional | 94.17 | |
| PTZ00004 | 378 | actin-2; Provisional | 94.14 | |
| PRK04374 | 869 | PII uridylyl-transferase; Provisional | 94.11 | |
| PF08841 | 332 | DDR: Diol dehydratase reactivase ATPase-like domai | 94.04 | |
| PRK01759 | 854 | glnD PII uridylyl-transferase; Provisional | 93.79 | |
| COG5371 | 549 | Golgi nucleoside diphosphatase [Carbohydrate trans | 93.72 | |
| PRK03059 | 856 | PII uridylyl-transferase; Provisional | 93.72 | |
| COG4819 | 473 | EutA Ethanolamine utilization protein, possible ch | 93.68 | |
| PTZ00466 | 380 | actin-like protein; Provisional | 93.28 | |
| COG3437 | 360 | Response regulator containing a CheY-like receiver | 93.2 | |
| PRK05092 | 931 | PII uridylyl-transferase; Provisional | 93.13 | |
| TIGR01693 | 850 | UTase_glnD [Protein-PII] uridylyltransferase. This | 92.5 | |
| PRK10885 | 409 | cca multifunctional tRNA nucleotidyl transferase/2 | 92.34 | |
| smart00842 | 187 | FtsA Cell division protein FtsA. FtsA is essential | 92.32 | |
| PF00370 | 245 | FGGY_N: FGGY family of carbohydrate kinases, N-ter | 92.31 | |
| PRK13917 | 344 | plasmid segregation protein ParM; Provisional | 92.12 | |
| PTZ00452 | 375 | actin; Provisional | 91.85 | |
| COG1418 | 222 | Predicted HD superfamily hydrolase [General functi | 91.32 | |
| PF00022 | 393 | Actin: Actin; InterPro: IPR004000 Actin [, ] is a | 91.1 | |
| PTZ00281 | 376 | actin; Provisional | 90.66 | |
| TIGR02621 | 844 | cas3_GSU0051 CRISPR-associated helicase Cas3, Anae | 89.87 | |
| TIGR03192 | 293 | benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s | 89.73 | |
| TIGR03739 | 320 | PRTRC_D PRTRC system protein D. A novel genetic sy | 89.55 | |
| COG1940 | 314 | NagC Transcriptional regulator/sugar kinase [Trans | 89.49 | |
| COG2206 | 344 | c-di-GMP phosphodiesterase class II (HD-GYP domain | 89.38 | |
| TIGR03276 | 179 | Phn-HD phosphonate degradation operons associated | 88.93 | |
| PRK13480 | 314 | 3'-5' exoribonuclease YhaM; Provisional | 87.93 | |
| PRK13298 | 417 | tRNA CCA-pyrophosphorylase; Provisional | 87.93 | |
| CHL00094 | 621 | dnaK heat shock protein 70 | 87.68 | |
| TIGR01991 | 599 | HscA Fe-S protein assembly chaperone HscA. The Hea | 87.4 | |
| PRK00290 | 627 | dnaK molecular chaperone DnaK; Provisional | 86.51 | |
| COG2844 | 867 | GlnD UTP:GlnB (protein PII) uridylyltransferase [P | 86.33 | |
| PF00480 | 179 | ROK: ROK family; InterPro: IPR000600 A family of b | 86.14 | |
| TIGR02261 | 262 | benz_CoA_red_D benzoyl-CoA reductase, bcr type, su | 85.34 | |
| PRK01286 | 336 | deoxyguanosinetriphosphate triphosphohydrolase-lik | 85.22 | |
| PF00012 | 602 | HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho | 84.94 | |
| PRK05183 | 616 | hscA chaperone protein HscA; Provisional | 84.8 | |
| TIGR02350 | 595 | prok_dnaK chaperone protein DnaK. Members of this | 84.59 | |
| TIGR03286 | 404 | methan_mark_15 putative methanogenesis marker prot | 84.58 | |
| PTZ00186 | 657 | heat shock 70 kDa precursor protein; Provisional | 84.4 | |
| PRK10939 | 520 | autoinducer-2 (AI-2) kinase; Provisional | 83.72 | |
| PRK13410 | 668 | molecular chaperone DnaK; Provisional | 83.72 | |
| PTZ00400 | 663 | DnaK-type molecular chaperone; Provisional | 83.31 | |
| PRK13321 | 256 | pantothenate kinase; Reviewed | 82.89 | |
| PRK13318 | 258 | pantothenate kinase; Reviewed | 82.88 | |
| KOG2517 | 516 | consensus Ribulose kinase and related carbohydrate | 82.34 | |
| PLN03184 | 673 | chloroplast Hsp70; Provisional | 82.02 | |
| PF14450 | 120 | FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B | 81.24 | |
| smart00732 | 99 | YqgFc Likely ribonuclease with RNase H fold. YqgF | 80.29 |
| >PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-104 Score=864.80 Aligned_cols=491 Identities=28% Similarity=0.383 Sum_probs=440.2
Q ss_pred cCCCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCccc
Q 008139 9 QIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDH 88 (576)
Q Consensus 9 ~~~~~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~ 88 (576)
..+.+.+|||||||||+||+|+++.+ +.++++++.|++||||+|++.+|.|++++|+|+++||++|+++|++|+|+ +
T Consensus 2 ~~~~~~~A~IDIGSNSirL~I~~~~~-~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~F~~~~~~~~v~--~ 78 (496)
T PRK11031 2 LSSSSLYAAIDLGSNSFHMLVVREVA-GSIQTLARIKRKVRLAAGLDSDNALSNEAMERGWQCLRLFAERLQDIPPS--Q 78 (496)
T ss_pred CCCCCEEEEEEccccceeEEEEEecC-CceEEeecceeEEEccCCcCcCCCcCHHHHHHHHHHHHHHHHHHHhCCCC--e
Confidence 34467899999999999999999864 78999999999999999999999999999999999999999999999995 7
Q ss_pred EEEEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEeeE
Q 008139 89 TRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFC 168 (576)
Q Consensus 89 i~~vATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~ 168 (576)
|++|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++.. ++++++||||||||+++++++++.++
T Consensus 79 i~~vATsAvReA~N~~~fl~~i~~~tGl~ievIsG~eEA~l~~~gv~~~l~~~-~~~lviDIGGGStEl~~~~~~~~~~~ 157 (496)
T PRK11031 79 IRVVATATLRLAVNADEFLAKAQEILGCPVQVISGEEEARLIYQGVAHTTGGA-DQRLVVDIGGASTELVTGTGAQATSL 157 (496)
T ss_pred EEEEEeHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHhhhhccCCC-CCEEEEEecCCeeeEEEecCCceeee
Confidence 99999999999999999999999999999999999999999999999998753 45899999999999999999999999
Q ss_pred EeechhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhhhhhHHHHhcCCcEEEeehHHHHHHHHHHHcCCCCccccCCC
Q 008139 169 ESVNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVG 247 (576)
Q Consensus 169 ~SlplG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~lvG~gGt~~~la~~~~~~y~~~~~~~~~ 247 (576)
+|+|+|+||++++|+.++ +++.+..++.+|+++.+.+. .++++..++..+||+|||+++++++.... .
T Consensus 158 ~Sl~lG~vrl~e~f~~~~~~~~~~~~~~~~~i~~~l~~~--~~~~~~~~~~~lig~gGt~~~la~~~~~~-~-------- 226 (496)
T PRK11031 158 FSLSMGCVTWLERYFKDRNLTQENFDAAEKAAREVLRPV--ADELREHGWQVCVGASGTVQALQEIMMAQ-G-------- 226 (496)
T ss_pred eEEeccchHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH--HHHHhhcCCCEEEEEChHHHHHHHHHHhc-C--------
Confidence 999999999999998864 57777888899999998743 44555556667999999999999875321 1
Q ss_pred CCCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCCchHHHHHHH
Q 008139 248 DFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVAD 327 (576)
Q Consensus 248 ~~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~glReGil~~ 327 (576)
.+ ..++.++++++++++..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||++|||||++++
T Consensus 227 -----~~-~~i~~~~l~~l~~~l~~~~~~--~~~~~~gl~~~Radii~~g~~Il~~i~~~~~~~~i~vs~~glREGl~~~ 298 (496)
T PRK11031 227 -----MD-ERITLAKLQQLKQRAIQCGRL--EELEIEGLTLERALVFPSGLAILIAIFEELNIESMTLAGGALREGLVYG 298 (496)
T ss_pred -----CC-CcCCHHHHHHHHHHHhcCCHH--HHhcCCCCCccHHHHHHHHHHHHHHHHHHcCcCEEEECCchHHHHHHHH
Confidence 01 248999999999999999987 9999999999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCCchhhHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHH
Q 008139 328 SLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACL 407 (576)
Q Consensus 328 ~l~~~~~~~~~~~~~~~~s~~~l~~ry~~d~~~~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~Aal 407 (576)
++.+. ...|++..|+.++++||++|. .|+++|+++|++|||+|++.|++ ++++++||+|||+
T Consensus 299 ~~~~~-----~~~d~~~~s~~~l~~ry~~d~--~ha~~v~~~a~~Lf~~l~~~~~l-----------~~~~~~LL~~Aa~ 360 (496)
T PRK11031 299 MLHLP-----VEQDIRSRTLRNIQRRFQIDT--EQAQRVAKLADNFLQQVENEWHL-----------EPRSRELLISACQ 360 (496)
T ss_pred HHhhh-----cccchHHHHHHHHHHHcCcCH--HHHHHHHHHHHHHHHhhhhhcCC-----------ChHHHHHHHHHHH
Confidence 98753 134778889999999999987 89999999999999999999975 4467899999999
Q ss_pred HhhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhccCChHHHHHHHHHHHHHHHHHH
Q 008139 408 LHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVI 487 (576)
Q Consensus 408 LHdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~ 487 (576)
|||||++||+++||+||||||+|++ ++||||+|+.+||++++||||+.|+..++.+..|+++ .+.+|++|||||++
T Consensus 361 LhdiG~~I~~~~~~~Hs~yiI~~s~-l~G~s~~E~~~iA~i~~~h~k~~~~~~~~~~~~l~~~---~v~~L~~iLRLA~~ 436 (496)
T PRK11031 361 LHEIGLSVDFKQAPQHAAYLVRNLD-LPGFTPAQKKLLATLLLNQTNPVDLSSLHQQNALPPR---VAERLCRLLRLAII 436 (496)
T ss_pred HHhcCCccCCCccchHHHHHHhcCC-CCCCCHHHHHHHHHHHHHhcCCCchhhhhhhhccCHH---HHHHHHHHHHHHHH
Confidence 9999999999999999999999998 9999999999999999999999887666677778766 49999999999999
Q ss_pred hcc-ccCCCCcceEEEEeCceeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCceEEEE
Q 008139 488 LQQ-NDCVNLRGVDFFHSYEGFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVV 554 (576)
Q Consensus 488 Ld~-s~~~~i~~i~~~~~~~~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~ 554 (576)
||+ ++.++++++++.++++.++|+++.. |...+|. + .+++++++++|+++ |.++.+.
T Consensus 437 Ld~~~~~~~i~~~~~~~~~~~l~l~~~~~------~~~~~~l-~--~~~l~~e~~~~~~~-~~~l~~~ 494 (496)
T PRK11031 437 FASRRRDDLLPEVTLQANDELLTLTLPQG------WLAQHPL-G--AEELEQESQWQSYV-HWPLEVE 494 (496)
T ss_pred hccccCCCCCCceEEEEeCCEEEEEEChh------hhhhCcc-h--HHHHHHHHHHHHhC-CceEEEe
Confidence 994 5678999999998888888888665 5556664 3 59999999999999 8888764
|
|
| >PRK10854 exopolyphosphatase; Provisional | Back alignment and domain information |
|---|
| >COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03706 exo_poly_only exopolyphosphatase | Back alignment and domain information |
|---|
| >PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 | Back alignment and domain information |
|---|
| >PRK15080 ethanolamine utilization protein EutJ; Provisional | Back alignment and domain information |
|---|
| >PF01150 GDA1_CD39: GDA1/CD39 (nucleoside phosphatase) family; InterPro: IPR000407 A number of nucleoside diphosphate and triphosphate hydrolases as well as some yet uncharacterised proteins have been found to belong to the same family [, ] | Back alignment and domain information |
|---|
| >TIGR02529 EutJ ethanolamine utilization protein EutJ family protein | Back alignment and domain information |
|---|
| >KOG1386 consensus Nucleoside phosphatase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09472 ftsA cell division protein FtsA; Reviewed | Back alignment and domain information |
|---|
| >KOG1385 consensus Nucleoside phosphatase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF01966 HD: HD domain; InterPro: IPR006674 This domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity [] | Back alignment and domain information |
|---|
| >TIGR01174 ftsA cell division protein FtsA | Back alignment and domain information |
|---|
| >TIGR01175 pilM type IV pilus assembly protein PilM | Back alignment and domain information |
|---|
| >COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >cd00077 HDc Metal dependent phosphohydrolases with conserved 'HD' motif | Back alignment and domain information |
|---|
| >smart00471 HDc Metal dependent phosphohydrolases with conserved 'HD' motif | Back alignment and domain information |
|---|
| >TIGR00295 conserved hypothetical protein TIGR00295 | Back alignment and domain information |
|---|
| >PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes | Back alignment and domain information |
|---|
| >PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon | Back alignment and domain information |
|---|
| >PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional | Back alignment and domain information |
|---|
| >TIGR03401 cyanamide_fam HD domain protein, cyanamide hydratase family | Back alignment and domain information |
|---|
| >PRK13928 rod shape-determining protein Mbl; Provisional | Back alignment and domain information |
|---|
| >PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A | Back alignment and domain information |
|---|
| >PRK13930 rod shape-determining protein MreB; Provisional | Back alignment and domain information |
|---|
| >PRK13929 rod-share determining protein MreBH; Provisional | Back alignment and domain information |
|---|
| >COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK12703 tRNA 2'-O-methylase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00904 mreB cell shape determining protein, MreB/Mrl family | Back alignment and domain information |
|---|
| >TIGR00277 HDIG uncharacterized domain HDIG | Back alignment and domain information |
|---|
| >PRK13927 rod shape-determining protein MreB; Provisional | Back alignment and domain information |
|---|
| >TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative | Back alignment and domain information |
|---|
| >TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF | Back alignment and domain information |
|---|
| >PRK12705 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK12704 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated | Back alignment and domain information |
|---|
| >COG3294 HD supefamily hydrolase [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01596 cas3_HD CRISPR-associated endonuclease Cas3-HD | Back alignment and domain information |
|---|
| >PRK00106 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >smart00268 ACTIN Actin | Back alignment and domain information |
|---|
| >TIGR00488 putative HD superfamily hydrolase of NAD metabolism | Back alignment and domain information |
|---|
| >PRK10119 putative hydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK00227 glnD PII uridylyl-transferase; Provisional | Back alignment and domain information |
|---|
| >cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton | Back alignment and domain information |
|---|
| >PRK03381 PII uridylyl-transferase; Provisional | Back alignment and domain information |
|---|
| >COG1078 HD superfamily phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
| >COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PTZ00280 Actin-related protein 3; Provisional | Back alignment and domain information |
|---|
| >PRK05007 PII uridylyl-transferase; Provisional | Back alignment and domain information |
|---|
| >TIGR02692 tRNA_CCA_actino tRNA adenylyltransferase | Back alignment and domain information |
|---|
| >PRK00275 glnD PII uridylyl-transferase; Provisional | Back alignment and domain information |
|---|
| >PTZ00004 actin-2; Provisional | Back alignment and domain information |
|---|
| >PRK04374 PII uridylyl-transferase; Provisional | Back alignment and domain information |
|---|
| >PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] | Back alignment and domain information |
|---|
| >PRK01759 glnD PII uridylyl-transferase; Provisional | Back alignment and domain information |
|---|
| >COG5371 Golgi nucleoside diphosphatase [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK03059 PII uridylyl-transferase; Provisional | Back alignment and domain information |
|---|
| >COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PTZ00466 actin-like protein; Provisional | Back alignment and domain information |
|---|
| >COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK05092 PII uridylyl-transferase; Provisional | Back alignment and domain information |
|---|
| >TIGR01693 UTase_glnD [Protein-PII] uridylyltransferase | Back alignment and domain information |
|---|
| >PRK10885 cca multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; Reviewed | Back alignment and domain information |
|---|
| >smart00842 FtsA Cell division protein FtsA | Back alignment and domain information |
|---|
| >PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related | Back alignment and domain information |
|---|
| >PRK13917 plasmid segregation protein ParM; Provisional | Back alignment and domain information |
|---|
| >PTZ00452 actin; Provisional | Back alignment and domain information |
|---|
| >COG1418 Predicted HD superfamily hydrolase [General function prediction only] | Back alignment and domain information |
|---|
| >PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton | Back alignment and domain information |
|---|
| >PTZ00281 actin; Provisional | Back alignment and domain information |
|---|
| >TIGR02621 cas3_GSU0051 CRISPR-associated helicase Cas3, Anaes-subtype | Back alignment and domain information |
|---|
| >TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit | Back alignment and domain information |
|---|
| >TIGR03739 PRTRC_D PRTRC system protein D | Back alignment and domain information |
|---|
| >COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG2206 c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR03276 Phn-HD phosphonate degradation operons associated HDIG domain protein | Back alignment and domain information |
|---|
| >PRK13480 3'-5' exoribonuclease YhaM; Provisional | Back alignment and domain information |
|---|
| >PRK13298 tRNA CCA-pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >CHL00094 dnaK heat shock protein 70 | Back alignment and domain information |
|---|
| >TIGR01991 HscA Fe-S protein assembly chaperone HscA | Back alignment and domain information |
|---|
| >PRK00290 dnaK molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >COG2844 GlnD UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF00480 ROK: ROK family; InterPro: IPR000600 A family of bacterial proteins has been described which groups transcriptional repressors, sugar kinases and yet uncharacterised open reading frames [] | Back alignment and domain information |
|---|
| >TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D | Back alignment and domain information |
|---|
| >PRK01286 deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional | Back alignment and domain information |
|---|
| >PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins | Back alignment and domain information |
|---|
| >PRK05183 hscA chaperone protein HscA; Provisional | Back alignment and domain information |
|---|
| >TIGR02350 prok_dnaK chaperone protein DnaK | Back alignment and domain information |
|---|
| >TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 | Back alignment and domain information |
|---|
| >PTZ00186 heat shock 70 kDa precursor protein; Provisional | Back alignment and domain information |
|---|
| >PRK10939 autoinducer-2 (AI-2) kinase; Provisional | Back alignment and domain information |
|---|
| >PRK13410 molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >PTZ00400 DnaK-type molecular chaperone; Provisional | Back alignment and domain information |
|---|
| >PRK13321 pantothenate kinase; Reviewed | Back alignment and domain information |
|---|
| >PRK13318 pantothenate kinase; Reviewed | Back alignment and domain information |
|---|
| >KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PLN03184 chloroplast Hsp70; Provisional | Back alignment and domain information |
|---|
| >PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T | Back alignment and domain information |
|---|
| >smart00732 YqgFc Likely ribonuclease with RNase H fold | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 576 | ||||
| 1u6z_A | 513 | Structure Of An E. Coli Exopolyphosphatase: Insight | 3e-24 | ||
| 2flo_A | 524 | Crystal Structure Of Exopolyphosphatase (Ppx) From | 9e-21 | ||
| 3mdq_A | 315 | Crystal Structure Of An Exopolyphosphatase (Chu_031 | 6e-14 | ||
| 2j4r_A | 308 | Structural Study Of The Aquifex Aeolicus Ppx-Gppa E | 5e-11 | ||
| 1t6d_A | 315 | Miras Phasing Of The Aquifex Aeolicus PpxGPPA PHOSP | 7e-11 | ||
| 1t6c_A | 315 | Structural Characterization Of The PpxGPPA PROTEIN | 1e-10 | ||
| 3cer_A | 343 | Crystal Structure Of The Exopolyphosphatase-Like Pr | 2e-08 | ||
| 3rf0_A | 209 | Crystal Structure Of Exopolyphosphatase From Yersin | 3e-04 |
| >pdb|1U6Z|A Chain A, Structure Of An E. Coli Exopolyphosphatase: Insight Into The Processive Hydrolysis Of Polyphosphate And Its Regulation Length = 513 | Back alignment and structure |
|
| >pdb|2FLO|A Chain A, Crystal Structure Of Exopolyphosphatase (Ppx) From E. Coli O157:h7 Length = 524 | Back alignment and structure |
| >pdb|3MDQ|A Chain A, Crystal Structure Of An Exopolyphosphatase (Chu_0316) From Cytophaga Hutchinsonii Atcc 33406 At 1.50 A Resolution Length = 315 | Back alignment and structure |
| >pdb|2J4R|A Chain A, Structural Study Of The Aquifex Aeolicus Ppx-Gppa Enzyme Length = 308 | Back alignment and structure |
| >pdb|1T6D|A Chain A, Miras Phasing Of The Aquifex Aeolicus PpxGPPA PHOSPHATASE: CRYSTAL Structure Of The Type Ii Variant Length = 315 | Back alignment and structure |
| >pdb|1T6C|A Chain A, Structural Characterization Of The PpxGPPA PROTEIN FAMILY: CRYSTAL Structure Of The Aquifex Aeolicus Family Member Length = 315 | Back alignment and structure |
| >pdb|3CER|A Chain A, Crystal Structure Of The Exopolyphosphatase-Like Protein Q8g5j2. Northeast Structural Genomics Consortium Target Blr13 Length = 343 | Back alignment and structure |
| >pdb|3RF0|A Chain A, Crystal Structure Of Exopolyphosphatase From Yersinia Pestis Length = 209 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Length = 513 | Back alignment and structure |
|---|
Score = 403 bits (1038), Expect = e-135
Identities = 121/550 (22%), Positives = 232/550 (42%), Gaps = 54/550 (9%)
Query: 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLL 73
FA++D+G++SF ++I R +G I LKQ V L L +S ++ R + L
Sbjct: 12 EFAAVDLGSNSFHMVIAR-VVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLS 70
Query: 74 MFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMG 133
+F + +Q + V T +R A N +F++ + + + +++++G +EA+ ++MG
Sbjct: 71 LFAERLQGFSP--ASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMG 128
Query: 134 VLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNF--EE 191
V P R L +DIGGGSTE VIG+ + + ES +G VS ++ + G E
Sbjct: 129 VEHTQPEKGR-KLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFP-GGVINKEN 186
Query: 192 VLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDFGG 251
+ R + + + G+ VA+G+SGTI+A + ++ +
Sbjct: 187 FQRARMAAAQKLETL--TWQFRIQGWNVAMGASGTIKAAHEVLMEMGE------------ 232
Query: 252 CKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIE 311
+D ++ L+ +V+ + + + R V G +L +F+ L I
Sbjct: 233 --KDGIITPERLEKLVKEVL--RHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIR 288
Query: 312 EMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFN-NKKRVKAGAQCASIA 370
E+ +S L EGV+ + + + + R R+ LA +++ + ++ +
Sbjct: 289 ELRLSDGALREGVLYEMEGR-----FRHQDVRSRTASSLANQYHIDSEQ---ARRVLDTT 340
Query: 371 KDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMN 430
++E R+ + L A +LH +G + G H+ S +I+ N
Sbjct: 341 MQMYEQWREQQPK---------LAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQN 391
Query: 431 GDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490
D L G++ ++ ++A L R+HRK F K++F L ++RL V+L
Sbjct: 392 SD-LPGFNQEQQLMMATLVRYHRKAIKLDDL---PRFTLFKKKQFLPLIQLLRLGVLLNN 447
Query: 491 NDCVNLRGVDFFHSYEGFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQE 550
+ + P + +LEKE E+++ +
Sbjct: 448 QRQATTTPPTLTLITDDSHWTL-------RFPHDWFSQNALVLLDLEKEQEYWEGVAGWR 500
Query: 551 LLVVGSSSSS 560
L + S+
Sbjct: 501 LKIEEESTPE 510
|
| >3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} Length = 508 | Back alignment and structure |
|---|
| >3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Length = 315 | Back alignment and structure |
|---|
| >3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Length = 343 | Back alignment and structure |
|---|
| >1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Length = 315 | Back alignment and structure |
|---|
| >3rf0_A Exopolyphosphatase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, hydrolase; HET: MSE; 1.80A {Yersinia pestis} Length = 209 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 576 | |||
| 1u6z_A | 513 | Exopolyphosphatase; alpha/beta protein, askha (ace | 100.0 | |
| 3hi0_A | 508 | Putative exopolyphosphatase; 17739545, structural | 100.0 | |
| 3mdq_A | 315 | Exopolyphosphatase; structural genomics, joint cen | 100.0 | |
| 3cer_A | 343 | Possible exopolyphosphatase-like protein; NESG, BL | 100.0 | |
| 1t6c_A | 315 | Exopolyphosphatase; alpha/beta protein, actin-like | 100.0 | |
| 3rf0_A | 209 | Exopolyphosphatase; structural genomics, center fo | 100.0 | |
| 3aap_A | 353 | Ectonucleoside triphosphate diphosphohydrolase I; | 99.96 | |
| 3cj1_A | 456 | Ectonucleoside triphosphate diphosphohydrolase 2; | 99.91 | |
| 3zx3_A | 452 | Ectonucleoside triphosphate diphosphohydrolase 1; | 99.81 | |
| 3h1q_A | 272 | Ethanolamine utilization protein EUTJ; ethanolamin | 99.72 | |
| 2ych_A | 377 | Competence protein PILM; cell cycle, type IV pilus | 98.23 | |
| 4a57_A | 611 | Nucleoside-triphosphatase 1; hydrolase; 2.00A {Tox | 98.17 | |
| 4a2a_A | 419 | Cell division protein FTSA, putative; cell cycle, | 98.15 | |
| 2pq7_A | 220 | Predicted HD superfamily hydrolase; 104161995, HD | 97.52 | |
| 4gni_A | 409 | Putative heat shock protein; HSP70-type ATPase, AT | 97.08 | |
| 3tm8_A | 328 | BD1817, uncharacterized protein; HD-GYP, phosphodi | 96.91 | |
| 3ccg_A | 190 | HD superfamily hydrolase; NP_347894.1, HD domain, | 96.88 | |
| 1k8k_A | 418 | ARP3, actin-like protein 3, actin-2; beta-propelle | 96.79 | |
| 2o08_A | 188 | BH1327 protein; putative HD superfamily hydrolase, | 96.74 | |
| 3b57_A | 209 | LIN1889 protein; Q92AN1, X-RAY, NESG, structural g | 96.61 | |
| 2ogi_A | 196 | Hypothetical protein SAG1661; structural genomics, | 96.48 | |
| 2qgs_A | 225 | Protein Se1688; alpha-helical protein, structural | 96.45 | |
| 3dto_A | 223 | BH2835 protein; all alpha-helical protein, structu | 96.38 | |
| 3qfu_A | 394 | 78 kDa glucose-regulated protein homolog; HSP70, K | 96.36 | |
| 2fxu_A | 375 | Alpha-actin-1, actin, alpha skeletal muscle; actin | 96.36 | |
| 2d0o_A | 610 | DIOL dehydratase-reactivating factor large subunit | 96.33 | |
| 1nbw_A | 607 | Glycerol dehydratase reactivase alpha subunit; mol | 96.28 | |
| 2pjq_A | 231 | Uncharacterized protein LP_2664; LPR71, NESG, stru | 96.28 | |
| 3djb_A | 223 | Hydrolase, HD family; all alpha-helical protein., | 95.81 | |
| 1jce_A | 344 | ROD shape-determining protein MREB; MBL, actin, HS | 95.77 | |
| 2v7y_A | 509 | Chaperone protein DNAK; HSP70, heat shock protein, | 95.57 | |
| 2fsj_A | 346 | Hypothetical protein TA0583; actin homologs, archa | 94.66 | |
| 2qm1_A | 326 | Glucokinase; alpha-beta structure, putative helix- | 94.48 | |
| 3gw7_A | 239 | Uncharacterized protein YEDJ; all alpha-helical pr | 94.27 | |
| 4apw_A | 329 | ALP12; actin-like protein; 19.70A {Clostridium tet | 93.83 | |
| 3i33_A | 404 | Heat shock-related 70 kDa protein 2; protein-ADP c | 93.71 | |
| 3hc1_A | 305 | Uncharacterized HDOD domain protein; HDOD domain p | 93.6 | |
| 2q14_A | 410 | Phosphohydrolase; BT4208, HD domain, structural ge | 93.56 | |
| 3qb0_A | 498 | Actin-related protein 4; actin fold, ATP binding, | 93.5 | |
| 1hux_A | 270 | Activator of (R)-2-hydroxyglutaryl-COA dehydratase | 93.28 | |
| 3sk9_A | 265 | Putative uncharacterized protein TTHB187; crispr, | 92.95 | |
| 3u1n_A | 528 | SAM domain and HD domain-containing protein 1; deo | 92.59 | |
| 3js6_A | 355 | Uncharacterized PARM protein; partition, segregati | 92.48 | |
| 2hek_A | 371 | Hypothetical protein; predominantly alpha helical | 92.47 | |
| 1yuw_A | 554 | Heat shock cognate 71 kDa protein; chaperone; 2.60 | 92.45 | |
| 1zc6_A | 305 | Probable N-acetylglucosamine kinase; NESG, Q7NU07_ | 92.07 | |
| 4b9q_A | 605 | Chaperone protein DNAK; HET: ATP; 2.40A {Escherich | 91.66 | |
| 1dkg_D | 383 | Molecular chaperone DNAK; HSP70, GRPE, nucleotide | 91.62 | |
| 4ehu_A | 276 | Activator of 2-hydroxyisocaproyl-COA dehydratase; | 91.44 | |
| 3irh_A | 480 | HD domain protein; phosphohydrolase, dntpase, stru | 91.29 | |
| 3d2f_A | 675 | Heat shock protein homolog SSE1; nucleotide exchan | 91.11 | |
| 1k8k_B | 394 | ARP2, actin-like protein 2; beta-propeller, struct | 90.94 | |
| 2zgy_A | 320 | Plasmid segregation protein PARM; plasmid partitio | 90.74 | |
| 2ews_A | 287 | Pantothenate kinase; PANK, structural genomics, st | 90.6 | |
| 4fo0_A | 593 | Actin-related protein 8; chromatin remodeling, nuc | 88.67 | |
| 2ch5_A | 347 | NAGK protein; transferase, N-acetylglucosamine, gl | 88.39 | |
| 2hoe_A | 380 | N-acetylglucosamine kinase; TM1224, structural gen | 88.2 | |
| 3zyy_X | 631 | Iron-sulfur cluster binding protein; iron-sulfur-b | 88.15 | |
| 2kho_A | 605 | Heat shock protein 70; molecular chaperone, HSP70, | 87.97 | |
| 2dqb_A | 376 | Deoxyguanosinetriphosphate triphosphohydrolase, P; | 87.9 | |
| 1vqr_A | 297 | Hypothetical protein CJ0248; HD-domain/pdease-like | 87.34 | |
| 3dwl_A | 427 | Actin-related protein 3; propellor, actin-binding, | 87.3 | |
| 1z05_A | 429 | Transcriptional regulator, ROK family; structural | 85.94 | |
| 3i7a_A | 281 | Putative metal-dependent phosphohydrolase; YP_9268 | 85.37 | |
| 4e1j_A | 520 | Glycerol kinase; structural genomics, PSI-biology, | 84.93 | |
| 3vgl_A | 321 | Glucokinase; ROK family, transferase; HET: BGC ANP | 84.62 | |
| 4am6_A | 655 | Actin-like protein ARP8; nuclear protein, chromati | 81.71 | |
| 1z6r_A | 406 | MLC protein; transcriptional repressor, ROK family | 80.76 | |
| 3r8e_A | 321 | Hypothetical sugar kinase; ribonuclease H-like mot | 80.67 | |
| 4db3_A | 327 | Glcnac kinase, N-acetyl-D-glucosamine kinase; stru | 80.43 |
| >1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-105 Score=874.85 Aligned_cols=499 Identities=24% Similarity=0.376 Sum_probs=445.7
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccEE
Q 008139 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (576)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~e~~~~~~~~~l~~~k~~vrLg~~~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (576)
+++++|+|||||||+||+|+++. ++.++++++.|++||||+|++.+|.|++++|+|+++||++|+++|++|+|+ +|+
T Consensus 9 ~~~~~AaIDiGSNSirL~I~~~~-~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~~~~~v~--~v~ 85 (513)
T 1u6z_A 9 RPQEFAAVDLGSNSFHMVIARVV-DGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPA--SVC 85 (513)
T ss_dssp ---CEEEEEECSSCEEEEEEEEE-TTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHTTTCCGG--GEE
T ss_pred cCCeEEEEEeccccEEEEEEEEc-CCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHHHhCCCC--EEE
Confidence 45679999999999999999997 578999999999999999999999999999999999999999999999995 799
Q ss_pred EEeehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceeEEEeeCCeEeeEEe
Q 008139 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCES 170 (576)
Q Consensus 91 ~vATsAvR~A~N~~~fl~~i~~~tG~~i~vIsg~eEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~S 170 (576)
+|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++..+ +++++||||||||+++++++++..+.|
T Consensus 86 ~vATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~-~~lviDIGGGStEl~~~~~~~~~~~~S 164 (513)
T 1u6z_A 86 IVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKG-RKLVIDIGGGSTELVIGENFEPILVES 164 (513)
T ss_dssp EEECHHHHHCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCS-CEEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred EEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCC-CEEEEEECCCcEEEEEEeCCeeeEEEE
Confidence 9999999999999999999999999999999999999999999999987533 689999999999999999999999999
Q ss_pred echhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhhhhhHHHHhcCCcEEEeehHHHHHHHHHHHc-CCCCccccCCCC
Q 008139 171 VNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS-GYDRDFVDNVGD 248 (576)
Q Consensus 171 lplG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~lvG~gGt~~~la~~~~~-~y~~~~~~~~~~ 248 (576)
+|+||||++++|+.++ ++..++.++++++++.+....+ .++..++..+||+|||+++++++... .|+.
T Consensus 165 l~lG~vrlte~f~~~~~~~~~~~~~~~~~i~~~l~~~~~--~~~~~~~~~lvg~gGt~~~la~i~~~~~~~~-------- 234 (513)
T 1u6z_A 165 RRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTW--QFRIQGWNVAMGASGTIKAAHEVLMEMGEKD-------- 234 (513)
T ss_dssp ESCCHHHHHHHHSGGGBCCHHHHHHHHHHHHHHHTTTHH--HHHHHCCSEEEEESHHHHHHHHHHHHTTCSS--------
T ss_pred EeccHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHH--HhhhcCCCEEEEEChHHHHHHHHHHhCCCCC--------
Confidence 9999999999998864 6888899999999999976432 33444666799999999999998643 4532
Q ss_pred CCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCCchHHHHHHHH
Q 008139 249 FGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADS 328 (576)
Q Consensus 249 ~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~glReGil~~~ 328 (576)
+ .++.+++.++++++..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||++|||||+++++
T Consensus 235 ------~-~i~~~~l~~~~~~l~~~~~~--~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreGll~~~ 305 (513)
T 1u6z_A 235 ------G-IITPERLEKLVKEVLRHRNF--ASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEM 305 (513)
T ss_dssp ------S-CBCHHHHHHHHHHHTTCSBG--GGCCCTTCCTTGGGTHHHHHHHHHHHHHHHTCSCBEECSCCHHHHHHHHH
T ss_pred ------C-eecHHHHHHHHHHHHCCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHcCCCEEEECCCcHHHHHHHHH
Confidence 1 59999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCCchhhHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHH
Q 008139 329 LAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLL 408 (576)
Q Consensus 329 l~~~~~~~~~~~~~~~~s~~~l~~ry~~d~~~~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalL 408 (576)
+.+.. ..|++.+|+.++++||++|. .|+++|+++|++|||+|++.|++.. ++++++||+|||+|
T Consensus 306 ~~~~~-----~~d~~~~s~~~l~~ry~~d~--~ha~~V~~~a~~Lf~~l~~~~~l~~---------~~~~~~lL~~Aa~L 369 (513)
T 1u6z_A 306 EGRFR-----HQDVRSRTASSLANQYHIDS--EQARRVLDTTMQMYEQWREQQPKLA---------HPQLEALLRWAAML 369 (513)
T ss_dssp HHHHT-----TCCHHHHHHHHHHHHTTCCH--HHHHHHHHHHHHHHHHHHHHCGGGC---------CHHHHHHHHHHHHH
T ss_pred HHhcc-----cccHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHhhCcCC---------ChhHHHHHHHHHHH
Confidence 87632 23788999999999999987 8999999999999999999987421 23557999999999
Q ss_pred hhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhccCChHHHHHHHHHHHHHHHHHHh
Q 008139 409 HNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVIL 488 (576)
Q Consensus 409 HdIG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~L 488 (576)
||||++||+++||+||+|||+|++ ++||||+||.+||++++||+++.|+..++.+..|++ +.+++|++|||||++|
T Consensus 370 hdiG~~I~~~~~~~Hs~yii~n~~-l~G~s~~e~~~lA~l~~~h~~~~~~~~~~~~~~l~~---~~v~~L~~iLRlA~~L 445 (513)
T 1u6z_A 370 HEVGLNINHSGLHRHSAYILQNSD-LPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKK---KQFLPLIQLLRLGVLL 445 (513)
T ss_dssp TTTTTTTCSTTHHHHHHHHHHHSC-CTTCCHHHHHHHHHHHHTSSSCCCCTTCCCCSSCCH---HHHHHHHHHHHHHHHT
T ss_pred HHccCcCCccccchhHHHHHhcCC-CCCCCHHHHHHHHHHHHHhCCCCCcchhhhhhccCH---HHHHHHHHHHHHHHHh
Confidence 999999999999999999999998 999999999999999999999999766555678876 2589999999999999
Q ss_pred ccccCCC-Ccc-eEEEEeCceeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCceEEEEeecCCCc
Q 008139 489 QQNDCVN-LRG-VDFFHSYEGFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVGSSSSSN 561 (576)
Q Consensus 489 d~s~~~~-i~~-i~~~~~~~~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~~~~~~~~ 561 (576)
|++|.+. +++ ++++.+++.++|+++.. |..+++ +| .|.+++++++|+++||.++.+...++|..
T Consensus 446 d~~~~~~~i~~~~~~~~~~~~l~l~~~~~------~~~~~~-Le--~~~l~~~~~~~~~~~g~~l~l~~~~~~~~ 511 (513)
T 1u6z_A 446 NNQRQATTTPPTLTLITDDSHWTLRFPHD------WFSQNA-LV--LLDLEKEQEYWEGVAGWRLKIEEESTPEI 511 (513)
T ss_dssp TTTGGGCCCCSCCEEEEETTEEEEEECTT------GGGGCH-HH--HHHHHHHHHHHTTSTTCEEEEEECCCC--
T ss_pred ccccCCCCCCCeeEEEEECCEEEEEEcCc------ccccCc-HH--HHHHHHHHHHHHHHhCCeEEEEECCCccc
Confidence 9999888 999 99999888888887643 333344 55 59999999999999999999998877653
|
| >3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
| >3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
| >3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} | Back alignment and structure |
|---|
| >1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* | Back alignment and structure |
|---|
| >3rf0_A Exopolyphosphatase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, hydrolase; HET: MSE; 1.80A {Yersinia pestis} | Back alignment and structure |
|---|
| >3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A* | Back alignment and structure |
|---|
| >3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A* | Back alignment and structure |
|---|
| >3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A* | Back alignment and structure |
|---|
| >3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} | Back alignment and structure |
|---|
| >2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
| >4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A | Back alignment and structure |
|---|
| >4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* | Back alignment and structure |
|---|
| >2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} | Back alignment and structure |
|---|
| >3tm8_A BD1817, uncharacterized protein; HD-GYP, phosphodiesterase, unknown function, hydrolase,signa protein; 1.28A {Bdellovibrio bacteriovorus} PDB: 3tmb_A 3tmc_A 3tmd_A | Back alignment and structure |
|---|
| >3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
| >1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A | Back alignment and structure |
|---|
| >2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
| >3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V} | Back alignment and structure |
|---|
| >2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... | Back alignment and structure |
|---|
| >2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A | Back alignment and structure |
|---|
| >1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 | Back alignment and structure |
|---|
| >2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A | Back alignment and structure |
|---|
| >2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} | Back alignment and structure |
|---|
| >2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* | Back alignment and structure |
|---|
| >2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12} | Back alignment and structure |
|---|
| >4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} | Back alignment and structure |
|---|
| >3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... | Back alignment and structure |
|---|
| >3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
| >2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 | Back alignment and structure |
|---|
| >3sk9_A Putative uncharacterized protein TTHB187; crispr, CAS, HD domain, nuclease, hydrolase; 1.80A {Thermus thermophilus HB8} PDB: 3skd_A | Back alignment and structure |
|---|
| >3u1n_A SAM domain and HD domain-containing protein 1; deoxynucleotide triphosphohydrolase, hydrolase; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site AN site being FAR from EACH other, structural genomics, PSI; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* | Back alignment and structure |
|---|
| >1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
|---|
| >4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D | Back alignment and structure |
|---|
| >1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 | Back alignment and structure |
|---|
| >4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A | Back alignment and structure |
|---|
| >3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, P protein structure initiative, midwest center for structural genomics; HET: DGT DTP; 2.40A {Enterococcus faecalis} PDB: 2o6i_A* | Back alignment and structure |
|---|
| >3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* | Back alignment and structure |
|---|
| >1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* | Back alignment and structure |
|---|
| >2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A | Back alignment and structure |
|---|
| >2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 | Back alignment and structure |
|---|
| >4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* | Back alignment and structure |
|---|
| >2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
| >3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans} | Back alignment and structure |
|---|
| >2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} | Back alignment and structure |
|---|
| >2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, P; dntpase, DNTP, single-stranded DNA, DNA dGTPase, HD superfamily, structural genomics; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
| >1vqr_A Hypothetical protein CJ0248; HD-domain/pdease-like fold, structural genomics, joint cente structural genomics, JCSG; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3 | Back alignment and structure |
|---|
| >3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
| >3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B} | Back alignment and structure |
|---|
| >4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* | Back alignment and structure |
|---|
| >4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* | Back alignment and structure |
|---|
| >1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A | Back alignment and structure |
|---|
| >3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
| >4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 576 | ||||
| d1u6za1 | 197 | a.211.1.5 (A:313-509) Exopolyphosphatase Ppx C-ter | 2e-32 | |
| d1u6za2 | 124 | c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escher | 3e-25 | |
| d1t6ca2 | 180 | c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquif | 6e-25 | |
| d1t6ca1 | 126 | c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex | 6e-25 | |
| d1u6za3 | 177 | c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Esche | 5e-24 | |
| d3dtoa1 | 212 | a.211.1.1 (A:2-213) Uncharacterized protein BH2835 | 5e-04 |
| >d1u6za1 a.211.1.5 (A:313-509) Exopolyphosphatase Ppx C-terminal domain {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: Ppx associated domain domain: Exopolyphosphatase Ppx C-terminal domain species: Escherichia coli [TaxId: 562]
Score = 121 bits (305), Expect = 2e-32
Identities = 40/214 (18%), Positives = 83/214 (38%), Gaps = 24/214 (11%)
Query: 341 NARWRSVVRLAMRFN-NKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDL 399
+ R R+ LA +++ + ++ + + ++E R+ + +
Sbjct: 1 DVRSRTASSLANQYHIDSEQAR---RVLDTTMQMYEQWREQQPKLAH---------PQLE 48
Query: 400 EYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRS 459
L A +LH +G + G H+ S +I+ N D L G++ ++ ++A L R+HRK
Sbjct: 49 ALLRWAAMLHEVGLNINHSGLHRHSAYILQNSD-LPGFNQEQQLMMATLVRYHRKAIKLD 107
Query: 460 HHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNLRGVDFFHSYEGFKLVIKEARDQP 519
F K++F L ++RL V+L + ++
Sbjct: 108 DL---PRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLR------ 158
Query: 520 YLPGSSQPTLDNIEAELEKELEHFKKIFKQELLV 553
P + +LEKE E+++ + L +
Sbjct: 159 -FPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKI 191
|
| >d1u6za2 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Length = 124 | Back information, alignment and structure |
|---|
| >d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Length = 180 | Back information, alignment and structure |
|---|
| >d1t6ca1 c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Length = 126 | Back information, alignment and structure |
|---|
| >d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Length = 177 | Back information, alignment and structure |
|---|
| >d3dtoa1 a.211.1.1 (A:2-213) Uncharacterized protein BH2835 {Bacillus halodurans [TaxId: 86665]} Length = 212 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 576 | |||
| d1u6za1 | 197 | Exopolyphosphatase Ppx C-terminal domain {Escheric | 100.0 | |
| d1t6ca1 | 126 | Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 | 100.0 | |
| d1t6ca2 | 180 | Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 | 100.0 | |
| d1u6za2 | 124 | Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 | 100.0 | |
| d1u6za3 | 177 | Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 | 100.0 | |
| d2pjqa1 | 215 | Uncharacterized protein LP2664 {Lactobacillus plan | 96.91 | |
| d2pq7a1 | 217 | Predicted hydrolase mes0020 {Uncultured thermotoga | 96.88 | |
| d3dtoa1 | 212 | Uncharacterized protein BH2835 {Bacillus haloduran | 96.81 | |
| d3b57a1 | 201 | Uncharacterized protein Lin1889 {Listeria innocua | 96.7 | |
| d2qgsa1 | 216 | Uncharacterized protein SE1688 {Staphylococcus epi | 96.43 | |
| d3djba1 | 213 | Uncharacterized protein BT9727_1981 {Bacillus thur | 96.26 | |
| d1e4ft2 | 191 | Cell division protein FtsA {Thermotoga maritima [T | 96.24 | |
| d1jcea2 | 196 | Prokaryotic actin homolog MreB {Thermotoga maritim | 95.05 | |
| d2fsja1 | 161 | Hypothetical protein Ta0583 {Archaeon Thermoplasma | 93.18 | |
| d2zgya2 | 163 | Plasmid segregation protein ParM {Escherichia coli | 92.9 | |
| d2o6ia1 | 453 | Hypothetical protein EF1143 {Enterococcus faecalis | 92.58 | |
| d1e4ft1 | 193 | Cell division protein FtsA {Thermotoga maritima [T | 91.56 | |
| d2heka1 | 369 | Hypothetical protein aq_1910 {Aquifex aeolicus [Ta | 90.56 | |
| d1zc6a1 | 114 | Probable N-acetylglucosamine kinase CV2896 {Chromo | 90.48 | |
| d2p3ra1 | 252 | Glycerol kinase {Escherichia coli [TaxId: 562]} | 88.61 | |
| d1bupa2 | 193 | Heat shock protein 70kDa, ATPase fragment {Cow (Bo | 82.44 | |
| d1xc3a1 | 118 | Putative fructokinase YhdR {Bacillus subtilis [Tax | 80.4 |
| >d1u6za1 a.211.1.5 (A:313-509) Exopolyphosphatase Ppx C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: Ppx associated domain domain: Exopolyphosphatase Ppx C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.2e-41 Score=323.29 Aligned_cols=195 Identities=22% Similarity=0.314 Sum_probs=167.9
Q ss_pred hhhHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCc
Q 008139 341 NARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGY 420 (576)
Q Consensus 341 ~~~~~s~~~l~~ry~~d~~~~ha~~V~~~A~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~LL~~AalLHdIG~~I~~~~h 420 (576)
|+|++|+.+++.||++|. +||++|+++|++|||+|++.|+++. +++++.||+|||+|||||++||+++|
T Consensus 1 D~R~~sv~~l~~ry~vd~--~ha~~V~~~A~~Lfd~l~~~~~~~~---------~~~~~~lL~~AA~LHeiG~~I~~~~~ 69 (197)
T d1u6za1 1 DVRSRTASSLANQYHIDS--EQARRVLDTTMQMYEQWREQQPKLA---------HPQLEALLRWAAMLHEVGLNINHSGL 69 (197)
T ss_dssp CHHHHHHHHHHHHTTCCH--HHHHHHHHHHHHHHHHHHHHCGGGC---------CHHHHHHHHHHHHHTTTTTTTCSTTH
T ss_pred ChHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHhcCccc---------CHHHHHHHHHHHHHHhcCcccCCccH
Confidence 578999999999999987 8999999999999999999987643 34568999999999999999999999
Q ss_pred hhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCCchhhccCChHHHHHHHHHHHHHHHHHHhccccCCCCc--c
Q 008139 421 HKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNLR--G 498 (576)
Q Consensus 421 ~~Hs~yiI~ns~~l~G~s~~E~~~iA~i~ryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~s~~~~i~--~ 498 (576)
|+||+|||.|++ ++||||+|+.+||.+|+||||+.|+...+.+..++ +..+.+|++|||||++||+++.+.+. .
T Consensus 70 hkHs~Yii~n~~-l~Gfs~~E~~~iA~l~~~hrk~~~~~~~~~~~~~~---~~~~~~l~~iLRLA~~L~~sr~~~~~~~~ 145 (197)
T d1u6za1 70 HRHSAYILQNSD-LPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFK---KKQFLPLIQLLRLGVLLNNQRQATTTPPT 145 (197)
T ss_dssp HHHHHHHHHHSC-CTTCCHHHHHHHHHHHHTSSSCCCCTTCCCCSSCC---HHHHHHHHHHHHHHHHTTTTGGGCCCCSC
T ss_pred HHHHHHHHhCCC-CCCCCHHHHHHHHHHHHHhcCCCCcccccccchhh---HHHHHHHHHHHHHHHHHHhccccccCCcc
Confidence 999999999998 99999999999999999999999876555555554 45678899999999999999988876 5
Q ss_pred eEEEEeCceeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCceEEEEeecCC
Q 008139 499 VDFFHSYEGFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVGSSSS 559 (576)
Q Consensus 499 i~~~~~~~~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~~~~~~ 559 (576)
+++..+++.++|.++.+ |..++| +| .|.+++++++|+++||.+++|...++|
T Consensus 146 ~~~~~~~~~l~l~~~~~------~~~~~~-L~--~~~l~~e~~~fe~v~g~~l~i~~~~~~ 197 (197)
T d1u6za1 146 LTLITDDSHWTLRFPHD------WFSQNA-LV--LLDLEKEQEYWEGVAGWRLKIEEESTP 197 (197)
T ss_dssp CEEEEETTEEEEEECTT------GGGGCH-HH--HHHHHHHHHHHTTSTTCEEEEEECCCC
T ss_pred ceEeeCCCEEEEEeCCc------chhhCh-HH--HHHHHHHHHHHHHHhCCceEEeeCCCC
Confidence 66666677777777554 344454 34 599999999999999999999887664
|
| >d1t6ca1 c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
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| >d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
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| >d1u6za2 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2pjqa1 a.211.1.1 (A:1-215) Uncharacterized protein LP2664 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d2pq7a1 a.211.1.1 (A:1-217) Predicted hydrolase mes0020 {Uncultured thermotogales bacterium [TaxId: 221214]} | Back information, alignment and structure |
|---|
| >d3dtoa1 a.211.1.1 (A:2-213) Uncharacterized protein BH2835 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
| >d3b57a1 a.211.1.1 (A:1-201) Uncharacterized protein Lin1889 {Listeria innocua [TaxId: 1642]} | Back information, alignment and structure |
|---|
| >d2qgsa1 a.211.1.1 (A:1-216) Uncharacterized protein SE1688 {Staphylococcus epidermidis [TaxId: 1282]} | Back information, alignment and structure |
|---|
| >d3djba1 a.211.1.1 (A:2-214) Uncharacterized protein BT9727_1981 {Bacillus thuringiensis [TaxId: 1428]} | Back information, alignment and structure |
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| >d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
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| >d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2o6ia1 a.211.1.1 (A:1-453) Hypothetical protein EF1143 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} | Back information, alignment and structure |
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| >d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1xc3a1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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