Citrus Sinensis ID: 008144

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570------
MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPLEVQSMHGEMSREFG
ccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEcccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHcccccccccEEEEEcccccHHHHHHHHHHHHHHHHccccHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccccccccEEEEEEcccccccccccccccHHHHHHHccccccccEEEEcccccccccHHHHHHHcccccccccccccEEEEcccccccccccccccccccEEEEEccccccccccccccccccEEEccccccccccHHHHHccccccccccHHHHHHHcccccccccHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHcccEEEEcccccccccccccccHHHHHHHHHHcHHcHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccc
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHccccccccEEEEEcccccccccEEEHHHHHHHHHccccHcHEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEccccccccccccEEEccccHHHHHHHccccccHHcHHHccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccccccEEEEEEcccccHEHHcHHEHccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccccEEEccccccHHHHHHHHHHEccccHcHHHHHHHHHHHHHHHHcccEEEcccccccEcccccEEEEcccccHcHHcc
mdsplplhvchvNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRaylwrpvsrtvfperlpeddklpaidvfictadpekepaiGVMNTVLSAMaldypvdklhvylsddggspitlHGMREACRFAKWwlpfcrrygikticpqayfseadsddyfgdseFMVEKKKIKEKYEMFEEHVTKAvedgeygnsqnHSTIIEIIQetfgesetirqadlvempllvyvsrekrpehlhHFKAGALNVLLRVSgvisnspyilgldcdmycndptsaRQAMCfhldpkissslafvqfpqkfhninkydiydgrfrSAYCVQwqgmdglkgpvlsgtgyyikreSLYAdfthtelkdtfgksNVLINSLHQSYkqnnangenfsnVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILhckgwtstyltpfrpqflgtsttNLNDLLIqgtrwgsgltdvglsrfcpllygpsrmSLLQSmcygelsffpllyclplwclatlpqlcllngislyperfvntckrsfplevQSMHgemsrefg
MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFperlpeddklpAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAvedgeygnsqNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSfplevqsmhgemsrefg
MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPLEVQSMHGEMSREFG
*****PLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE***YG**QNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYK*******NFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPL**************
***PLPL*VCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPE**HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPLEVQSMHGEMSREFG
MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPLEVQ***********
****LPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESET*RQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPLEVQS**********
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooo
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPLEVQSMHGEMSREFG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query576 2.2.26 [Sep-21-2011]
Q8VYR4 722 Cellulose synthase-like p yes no 0.880 0.702 0.388 1e-104
Q570S7 760 Cellulose synthase-like p no no 0.890 0.675 0.384 1e-101
Q0WVN5 751 Cellulose synthase-like p no no 0.890 0.683 0.380 1e-99
Q651X7 737 Cellulose synthase-like p yes no 0.883 0.690 0.361 2e-99
Q651X6 728 Cellulose synthase-like p no no 0.883 0.699 0.365 2e-96
Q9SKJ5 1065 Probable cellulose syntha no no 0.934 0.505 0.335 2e-95
Q8LPK5 985 Cellulose synthase A cata no no 0.925 0.541 0.346 4e-95
Q0DXZ1 745 Cellulose synthase-like p no no 0.817 0.632 0.377 2e-94
Q69P51 1055 Cellulose synthase A cata no no 0.899 0.490 0.342 2e-94
A2Z1C8 1055 Cellulose synthase A cata N/A no 0.899 0.490 0.342 2e-94
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function desciption
 Score =  379 bits (973), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/569 (38%), Positives = 307/569 (53%), Gaps = 62/569 (10%)

Query: 7   LHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSF 66
           LH CH      I  R++A+ H   I  L+Y+    ++     +   L LL   S+++L+F
Sbjct: 11  LHTCHPCR-RTIPYRIYAVFHTCGIIALMYHHVHSIVNANNTLITCLLLL---SDIVLAF 66

Query: 67  IWLLGRAYLWRPVSRTVFPERL---PEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMA 123
           +W    +    P+ RT +PE+    PED   P +DVFICTADP KEP + V+NT LS MA
Sbjct: 67  MWATTTSLRLNPIHRTEYPEKYAAKPED--FPKLDVFICTADPYKEPPMMVVNTALSVMA 124

Query: 124 LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDD 183
            +YP  K+ VY+SDDGGS +TL  + EA +F+K WLPFC+   ++   P+ YFS      
Sbjct: 125 YEYPSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYFSSKSH-- 182

Query: 184 YFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNS--------------------QNH 223
                    E + +K  YE  +  V   VE G+   +                     +H
Sbjct: 183 -----SSSDEAENLKMMYEDMKSRVEHVVESGKVETAFIACDQFSCVFDLWTDKFTRHDH 237

Query: 224 STIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISN 283
            TII ++Q    E+E         MP L+YVSREK     HHFKAGALN LLRVS V++N
Sbjct: 238 PTIIMVLQHN--ETEM--------MPNLIYVSREKSKVSPHHFKAGALNTLLRVSAVMTN 287

Query: 284 SPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSA 343
           SP IL LDCDMY N+PT+   A+C+  DPKI+  L FVQFPQKF  +NK DIY    +  
Sbjct: 288 SPIILTLDCDMYSNNPTTPLHALCYLSDPKINFDLGFVQFPQKFQGVNKNDIYASELKRP 347

Query: 344 YCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELK--DTFGKSNVLINSLHQSYKQN 401
           + +   G DGL GPV  GTG +  R + Y   T   L   +TFG + +    +       
Sbjct: 348 FDINTVGFDGLMGPVHMGTGCFFNRRAFYGPPTTLILPEIETFGPNRIADKPIKA----- 402

Query: 402 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYL 461
                   ++L     V A C+YE  T WG ++G  Y S+ ED FTGF+LHC+GW S + 
Sbjct: 403 -------QDILALAHDV-AGCNYECNTNWGSKIGFRYGSLVEDYFTGFMLHCEGWRSIFC 454

Query: 462 TPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSF 521
           +P +  F G S   L D++ Q  RW  GL +V  SR+ PL YG   +SLL S+ Y   +F
Sbjct: 455 SPTKAAFYGDSPKCLTDVIGQQIRWSVGLLEVAFSRYNPLTYGIKPLSLLMSLGYCHYAF 514

Query: 522 FPLLYCLPLWCLATLPQLCLLNGISLYPE 550
           +P  +C+PL     LPQ+ L++G+S++P+
Sbjct: 515 WP-FWCIPLVVYGILPQVALIHGVSVFPK 542
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function description
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function description
>sp|Q9SKJ5|CESAA_ARATH Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1 Back     alignment and function description
>sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1 Back     alignment and function description
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function description
>sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 Back     alignment and function description
>sp|A2Z1C8|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query576
224111028 857 predicted protein [Populus trichocarpa] 0.954 0.641 0.607 0.0
359477703 733 PREDICTED: cellulose synthase-like prote 0.934 0.733 0.619 0.0
356548660 736 PREDICTED: cellulose synthase-like prote 0.930 0.728 0.639 0.0
255576870 762 cellulose synthase, putative [Ricinus co 0.939 0.709 0.620 0.0
359477617550 PREDICTED: cellulose synthase A catalyti 0.932 0.976 0.602 0.0
356535446 740 PREDICTED: cellulose synthase-like prote 0.939 0.731 0.615 0.0
297737188 822 unnamed protein product [Vitis vinifera] 0.932 0.653 0.575 0.0
429326514 723 cellulose synthase-like protein [Populus 0.918 0.731 0.601 0.0
224111026 723 predicted protein [Populus trichocarpa] 0.918 0.731 0.598 0.0
255576874570 transferase, putative [Ricinus communis] 0.901 0.910 0.575 0.0
>gi|224111028|ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  754 bits (1946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/630 (60%), Positives = 449/630 (71%), Gaps = 80/630 (12%)

Query: 1   MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQE--TRA-IPIILWLLV 57
           M+   PLH+CHV+  S+ INRLH LLH IAI FLIYYRAS+L QE  T+A +P++LWLLV
Sbjct: 46  MEISPPLHLCHVSKTSIFINRLHGLLHSIAIAFLIYYRASFLFQEPQTKATVPMLLWLLV 105

Query: 58  FASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNT 117
           F +ELLLSFIWL+G+AY W PVSRTVFPERLPEDDKLPAIDVFICT DP+KEP + VMNT
Sbjct: 106 FVAELLLSFIWLIGQAYHWHPVSRTVFPERLPEDDKLPAIDVFICTVDPDKEPTLDVMNT 165

Query: 118 VLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177
           VLSAMALDYP +KL++YLSDDGG+ +TLHGM+EA RFAK WLPFC++YGIKT CP+AYFS
Sbjct: 166 VLSAMALDYPAEKLNLYLSDDGGAAVTLHGMKEAWRFAKSWLPFCKKYGIKTRCPKAYFS 225

Query: 178 E-ADSDDYFGDS-EFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQ------NHSTIIE- 228
             +  DD FG S EFM +++ I+EKYE F+E V +  ED     ++      +H  +IE 
Sbjct: 226 ATSKDDDSFGSSNEFMADRQIIQEKYEDFKERVMRFREDFVLEETKSDITGRDHPALIEA 285

Query: 229 --------------IIQETFGESETIRQADLV---------------EMPLLVYVSREKR 259
                         I +   G ++   +AD V               EMPLLVYVSREKR
Sbjct: 286 FLKKKELSPNWSLVIGKGKGGLTDAEHEADTVIQDNSNEEAPKDEANEMPLLVYVSREKR 345

Query: 260 PEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLA 319
           P H HHFKAGALNVLLRVSGVISNSP+IL LDCDMYCNDPTSARQAMCF  DP ISSSLA
Sbjct: 346 PSHPHHFKAGALNVLLRVSGVISNSPHILVLDCDMYCNDPTSARQAMCFFFDPNISSSLA 405

Query: 320 FVQFPQKFHNINKYDIYDGRFRSAYCVQ-------------WQGMDGLKGPVLSGTGYYI 366
           FVQFPQ+FHNI+K+DIYD + RS + V+             WQG+DGLKGPVLSGTG+YI
Sbjct: 406 FVQFPQRFHNISKHDIYDSQLRSTFGVRLVFIDFTLLNQILWQGLDGLKGPVLSGTGFYI 465

Query: 367 KRESLYADFTHT--------------------------ELKDTFGKSNVLINSLHQSYKQ 400
           KR SLY D                              EL+DTFG SN  +NS+ Q+YK 
Sbjct: 466 KRNSLYGDSMQKGLVLSNPNHAASSQHALDDPKSCNLLELRDTFGLSNEFVNSIRQNYKA 525

Query: 401 NNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTY 460
           N  +  + S++L +ET +LASC Y   TKWGEE   LY SV+ED FTGFILHCKGW S Y
Sbjct: 526 NPMSYGSVSSMLLQETRILASCDYPRHTKWGEEACFLYHSVAEDFFTGFILHCKGWLSVY 585

Query: 461 LTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELS 520
           L P RPQFLGTS T+LNDLLIQGTRW SGL +VGLSRFCPL+YG  RMS L+S+CY E+S
Sbjct: 586 LNPSRPQFLGTSITSLNDLLIQGTRWSSGLVEVGLSRFCPLIYGTLRMSFLESLCYAEIS 645

Query: 521 FFPLLYCLPLWCLATLPQLCLLNGISLYPE 550
            FPL YCLPLWC AT+PQLCLLNGI LYP+
Sbjct: 646 LFPLFYCLPLWCFATIPQLCLLNGIPLYPK 675

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359477703|ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356548660|ref|XP_003542718.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|255576870|ref|XP_002529321.1| cellulose synthase, putative [Ricinus communis] gi|223531245|gb|EEF33090.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359477617|ref|XP_002280659.2| PREDICTED: cellulose synthase A catalytic subunit 4 [UDP-forming]-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|356535446|ref|XP_003536256.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|297737188|emb|CBI26389.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|429326514|gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa] Back     alignment and taxonomy information
>gi|224111026|ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|222864761|gb|EEF01892.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255576874|ref|XP_002529323.1| transferase, putative [Ricinus communis] gi|223531247|gb|EEF33092.1| transferase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query576
TAIR|locus:2138116 722 CSLG2 "AT4G24000" [Arabidopsis 0.897 0.716 0.397 1.3e-98
TAIR|locus:2138106 751 CSLG3 "AT4G23990" [Arabidopsis 0.904 0.693 0.386 8.7e-95
TAIR|locus:2138126 760 CSLG1 "AT4G24010" [Arabidopsis 0.904 0.685 0.386 1.4e-94
TAIR|locus:2124167 985 IRX1 "IRREGULAR XYLEM 1" [Arab 0.487 0.285 0.424 1.3e-90
TAIR|locus:2012050 729 CSLE1 "AT1G55850" [Arabidopsis 0.600 0.474 0.379 3.4e-90
TAIR|locus:2040080 1065 CESA10 "cellulose synthase 10" 0.670 0.362 0.358 9.2e-88
TAIR|locus:2176090 1084 CESA6 "cellulose synthase 6" [ 0.592 0.314 0.379 9.3e-86
TAIR|locus:2172457 1049 CESA4 "cellulose synthase A4" 0.487 0.267 0.405 1.5e-85
TAIR|locus:2178193 1069 CESA5 "cellulose synthase 5" [ 0.609 0.328 0.369 1.9e-85
TAIR|locus:2127776 1081 CESA1 "cellulose synthase 1" [ 0.645 0.344 0.356 9.2e-85
TAIR|locus:2138116 CSLG2 "AT4G24000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
 Identities = 222/559 (39%), Positives = 313/559 (55%)

Query:     7 LHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSF 66
             LH CH    ++   R++A+ H   I  L+Y+    ++     +   L LL   S+++L+F
Sbjct:    11 LHTCHPCRRTIPY-RIYAVFHTCGIIALMYHHVHSIVNANNTLITCLLLL---SDIVLAF 66

Query:    67 IWLLGRAYLWRPVSRTVFPERL---PEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMA 123
             +W    +    P+ RT +PE+    PED   P +DVFICTADP KEP + V+NT LS MA
Sbjct:    67 MWATTTSLRLNPIHRTEYPEKYAAKPED--FPKLDVFICTADPYKEPPMMVVNTALSVMA 124

Query:   124 LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDD 183
              +YP  K+ VY+SDDGGS +TL  + EA +F+K WLPFC+   ++   P+ YFS      
Sbjct:   125 YEYPSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYFSSKSHSS 184

Query:   184 YFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNS----QNHSTIIEIIQETFGESE- 238
                 S+   E + +K  YE  +  V   VE G+   +       S + ++  + F   + 
Sbjct:   185 ----SD---EAENLKMMYEDMKSRVEHVVESGKVETAFIACDQFSCVFDLWTDKFTRHDH 237

Query:   239 -TI---RQADLVEM-PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCD 293
              TI    Q +  EM P L+YVSREK     HHFKAGALN LLRVS V++NSP IL LDCD
Sbjct:   238 PTIIMVLQHNETEMMPNLIYVSREKSKVSPHHFKAGALNTLLRVSAVMTNSPIILTLDCD 297

Query:   294 MYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDG 353
             MY N+PT+   A+C+  DPKI+  L FVQFPQKF  +NK DIY    +  + +   G DG
Sbjct:   298 MYSNNPTTPLHALCYLSDPKINFDLGFVQFPQKFQGVNKNDIYASELKRPFDINTVGFDG 357

Query:   354 LKGPVLSGTGYYIKRESLYADFTHTELKD--TFGKSNVLINSLHQSYKQNNANGENFSNV 411
             L GPV  GTG +  R + Y   T   L +  TFG + +       + K   A      ++
Sbjct:   358 LMGPVHMGTGCFFNRRAFYGPPTTLILPEIETFGPNRI-------ADKPIKAQ-----DI 405

Query:   412 LQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGT 471
             L     V A C+YE  T WG ++G  Y S+ ED FTGF+LHC+GW S + +P +  F G 
Sbjct:   406 LALAHDV-AGCNYECNTNWGSKIGFRYGSLVEDYFTGFMLHCEGWRSIFCSPTKAAFYGD 464

Query:   472 STTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLW 531
             S   L D++ Q  RW  GL +V  SR+ PL YG   +SLL S+ Y   +F+P  +C+PL 
Sbjct:   465 SPKCLTDVIGQQIRWSVGLLEVAFSRYNPLTYGIKPLSLLMSLGYCHYAFWPF-WCIPLV 523

Query:   532 CLATLPQLCLLNGISLYPE 550
                 LPQ+ L++G+S++P+
Sbjct:   524 VYGILPQVALIHGVSVFPK 542
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016740 "transferase activity" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
TAIR|locus:2138106 CSLG3 "AT4G23990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138126 CSLG1 "AT4G24010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012050 CSLE1 "AT1G55850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
4th Layer2.4.1.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_X0687
hypothetical protein (857 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query576
PLN02893 734 PLN02893, PLN02893, Cellulose synthase-like protei 1e-170
PLN02189 1040 PLN02189, PLN02189, cellulose synthase 1e-113
PLN02190 756 PLN02190, PLN02190, cellulose synthase-like protei 1e-113
PLN02400 1085 PLN02400, PLN02400, cellulose synthase 1e-103
PLN02195 977 PLN02195, PLN02195, cellulose synthase A 2e-81
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 1e-80
PLN02436 1094 PLN02436, PLN02436, cellulose synthase A 8e-80
PLN02638 1079 PLN02638, PLN02638, cellulose synthase A (UDP-form 1e-79
pfam03552 716 pfam03552, Cellulose_synt, Cellulose synthase 2e-79
PLN02248 1135 PLN02248, PLN02248, cellulose synthase-like protei 8e-54
PLN02248 1135 PLN02248, PLN02248, cellulose synthase-like protei 5e-34
PLN02195 977 PLN02195, PLN02195, cellulose synthase A 2e-33
pfam03552 716 pfam03552, Cellulose_synt, Cellulose synthase 8e-32
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 5e-31
PLN02436 1094 PLN02436, PLN02436, cellulose synthase A 5e-31
PLN02638 1079 PLN02638, PLN02638, cellulose synthase A (UDP-form 1e-29
TIGR03030713 TIGR03030, CelA, cellulose synthase catalytic subu 6e-14
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 1e-11
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 4e-09
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 2e-08
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 5e-08
COG1215439 COG1215, COG1215, Glycosyltransferases, probably i 2e-07
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 9e-06
cd06423180 cd06423, CESA_like, CESA_like is the cellulose syn 4e-04
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 0.002
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  501 bits (1291), Expect = e-170
 Identities = 230/569 (40%), Positives = 318/569 (55%), Gaps = 52/569 (9%)

Query: 6   PLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLS 65
           PLH CH      I NR+ A+++  AI  L+Y+    LL  T     ++ LL+  ++++L+
Sbjct: 13  PLHTCHPMR-RTIANRVFAVVYSCAILALLYHHVIALLHSTT---TLITLLLLLADIVLA 68

Query: 66  FIWLLGRAYLWRPVSRTVFPERL----PEDDKLPAIDVFICTADPEKEPAIGVMNTVLSA 121
           F+W   +A+   PV R VF E L     E D  P +DVFICTADP KEP +GV+NT LS 
Sbjct: 69  FMWATTQAFRMCPVHRRVFIEHLEHYAKESD-YPGLDVFICTADPYKEPPMGVVNTALSV 127

Query: 122 MALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADS 181
           MA DYP +KL VY+SDDGGS +TL    EA +FA  WLPFC++  I   CP+AYF  ++S
Sbjct: 128 MAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYF-SSNS 186

Query: 182 DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNS--------------------Q 221
             +  ++E      +IK  YE  +  V   VE G+                        Q
Sbjct: 187 HSWSPETE------QIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQ 240

Query: 222 NHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVI 281
           +H T+I+++ E    S   +      MP L+YVSREK     HHFKAGALN LLRVS  +
Sbjct: 241 DHPTVIQVLLE----SGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATM 296

Query: 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR 341
           +N+P IL LDCDMY NDP +  +A+C+ LDP +   L +VQFPQ FH INK DIY G  +
Sbjct: 297 TNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELK 356

Query: 342 SAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQN 401
             + +   GMDGL GP   GTG + +R   Y   +   L +        +N  H   K  
Sbjct: 357 RLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPE-----LNPDHLVDKSI 411

Query: 402 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYL 461
            +       VL     V A C+YE+QT WG ++G  Y S+ ED +TG+ L C+GW S + 
Sbjct: 412 KSQ-----EVLALAHHV-AGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFC 465

Query: 462 TPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSF 521
            P RP FLG S  NL+D+L Q  RW  GL +V  S++ P+ +G   + LL  + Y   +F
Sbjct: 466 NPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAF 525

Query: 522 FPLLYCLPLWCLATLPQLCLLNGISLYPE 550
           +P ++ +P+   A LPQL LLNG+S++P+
Sbjct: 526 WP-IWSIPITIYAFLPQLALLNGVSIFPK 553

Length = 734
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 576
PLN02638 1079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN02400 1085 cellulose synthase 100.0
PLN02436 1094 cellulose synthase A 100.0
PLN02915 1044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN02195 977 cellulose synthase A 100.0
PLN02189 1040 cellulose synthase 100.0
PLN02248 1135 cellulose synthase-like protein 100.0
PLN02190 756 cellulose synthase-like protein 100.0
PLN02893 734 Cellulose synthase-like protein 100.0
PF03552 720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
PRK05454 691 glucosyltransferase MdoH; Provisional 100.0
PRK14583444 hmsR N-glycosyltransferase; Provisional 100.0
COG1215439 Glycosyltransferases, probably involved in cell wa 100.0
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 100.0
PRK11204420 N-glycosyltransferase; Provisional 100.0
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 100.0
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 100.0
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 100.0
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 100.0
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 100.0
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 99.98
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 99.97
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 99.96
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 99.96
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 99.96
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.95
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 99.95
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 99.95
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 99.94
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.94
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 99.93
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 99.9
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.9
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 99.85
cd06438183 EpsO_like EpsO protein participates in the methano 99.85
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 99.81
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.81
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 99.79
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.77
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 99.75
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 99.75
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 99.75
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 99.74
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 99.72
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 99.72
cd06442224 DPM1_like DPM1_like represents putative enzymes si 99.72
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 99.71
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 99.71
PRK10073328 putative glycosyl transferase; Provisional 99.68
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 99.66
cd04188211 DPG_synthase DPG_synthase is involved in protein N 99.65
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 99.64
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 99.63
cd06423180 CESA_like CESA_like is the cellulose synthase supe 99.62
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 99.6
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 99.59
PRK10018279 putative glycosyl transferase; Provisional 99.59
PRK10063248 putative glycosyl transferase; Provisional 99.57
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 99.54
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 99.47
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 99.44
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 99.43
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 99.41
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 99.38
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 99.34
KOG2571 862 consensus Chitin synthase/hyaluronan synthase (gly 99.34
COG1216305 Predicted glycosyltransferases [General function p 99.33
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 99.08
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 99.02
KOG2547431 consensus Ceramide glucosyltransferase [Lipid tran 98.67
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 98.57
KOG2977323 consensus Glycosyltransferase [General function pr 98.48
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 98.03
KOG3738559 consensus Predicted polypeptide N-acetylgalactosam 96.91
KOG3737603 consensus Predicted polypeptide N-acetylgalactosam 96.85
KOG3736578 consensus Polypeptide N-acetylgalactosaminyltransf 96.58
PF1370497 Glyco_tranf_2_4: Glycosyl transferase family 2 95.11
PF13712217 Glyco_tranf_2_5: Glycosyltransferase like family; 94.45
cd00899219 b4GalT Beta-4-Galactosyltransferase is involved in 93.7
PF03452269 Anp1: Anp1; InterPro: IPR005109 The members of thi 90.47
PF02364 817 Glucan_synthase: 1,3-beta-glucan synthase componen 90.45
TIGR02460381 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase 90.14
PRK14503393 mannosyl-3-phosphoglycerate synthase; Provisional 90.12
PF03071434 GNT-I: GNT-I family; InterPro: IPR004139 The biosy 90.01
COG4092346 Predicted glycosyltransferase involved in capsule 89.89
PF09488381 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas 88.68
PRK14502 694 bifunctional mannosyl-3-phosphoglycerate synthase/ 85.63
PF01644163 Chitin_synth_1: Chitin synthase; InterPro: IPR0048 82.74
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information 
Probab=100.00  E-value=4.1e-138  Score=1175.68  Aligned_cols=538  Identities=36%  Similarity=0.689  Sum_probs=496.1

Q ss_pred             CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 008144            3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR   81 (576)
Q Consensus         3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r   81 (576)
                      ..+||+++.+.++.. .+||+++++++++++++|+||+++..    ..+.|+|+++++||+||+|+|+++|+.+|+|+.|
T Consensus       253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R  328 (1079)
T PLN02638        253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVNR  328 (1079)
T ss_pred             CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence            378999999985542 67999999999999999999998854    3468999999999999999999999999999999


Q ss_pred             cCCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 008144           82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF  154 (576)
Q Consensus        82 ~~~~~~l~~-------~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~f  154 (576)
                      .+++++|.+       +++||.|||||||.||.||||.+++|||+|+||.|||.+||.|||+|||++..|+++|.||++|
T Consensus       329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F  408 (1079)
T PLN02638        329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF  408 (1079)
T ss_pred             ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence            999998864       2469999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhHHHhhCCccCCcccccccCC-CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 008144          155 AKWWLPFCRRYGIKTICPQAYFSEAD-SDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------Y  217 (576)
Q Consensus       155 a~~w~pfc~~~~v~~r~p~~yf~~~~-~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~-------~g~---------~  217 (576)
                      |+.||||||||+|||||||+||+.+. ..+++..++|++||+.||++||+||+|||.+.+       +|+         +
T Consensus       409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g  488 (1079)
T PLN02638        409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG  488 (1079)
T ss_pred             HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence            99999999999999999999999974 355566789999999999999999999997652       221         5


Q ss_pred             CCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCC
Q 008144          218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN  297 (576)
Q Consensus       218 ~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~  297 (576)
                      +++++||+|||+++++++..    |.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+++||||++|
T Consensus       489 ~~~~dHp~IiqVll~~~~~~----d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiN  564 (1079)
T PLN02638        489 NNTRDHPGMIQVFLGHSGGL----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYIN  564 (1079)
T ss_pred             CCCCCCHHHHHHHhcCCCcc----ccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccC
Confidence            68899999999999887642    44567899999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccc
Q 008144          298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH  377 (576)
Q Consensus       298 ~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~  377 (576)
                      ||++++++||||+||+.|+.+||||+||+|+|++++|+|+|++++||+++++|+||++||+|+||||+|||+||++..|+
T Consensus       565 ns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~  644 (1079)
T PLN02638        565 NSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPP  644 (1079)
T ss_pred             chHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987432


Q ss_pred             h----------------------------------------------------------------------hhhhhhcCh
Q 008144          378 T----------------------------------------------------------------------ELKDTFGKS  387 (576)
Q Consensus       378 ~----------------------------------------------------------------------~~~~~fg~~  387 (576)
                      +                                                                      .+.++||+|
T Consensus       645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S  724 (1079)
T PLN02638        645 IKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQS  724 (1079)
T ss_pred             ccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcccc
Confidence            1                                                                      234789999


Q ss_pred             hHHHHhHHhhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCe
Q 008144          388 NVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ  467 (576)
Q Consensus       388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~  467 (576)
                      .+|++|+..+.++...  ...+++++++|++|++|+||++|.||+++||.|+|+|||+.||++||++||||+|++|++++
T Consensus       725 ~~fi~S~~~~~~~~~~--~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~A  802 (1079)
T PLN02638        725 AVFVASTLMENGGVPQ--SATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA  802 (1079)
T ss_pred             HHHHHHHHHhhcCCCC--CCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchH
Confidence            9999999887765442  34678999999999999999999999999999999999999999999999999999876789


Q ss_pred             eEeecCCCHHHHHHHHHHhhhhhHHHHhhhcCCcccCC-CCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCC
Q 008144          468 FLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGP-SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGIS  546 (576)
Q Consensus       468 ~~g~aP~tl~~~l~Qr~RWa~G~~qv~~~~~~p~~~~~-~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g~~  546 (576)
                      +.|++|+|+.+++.||+||++|++|++++|+||++++. ++|++.||++|++.++|+ +.++|.++|+++|++||++|++
T Consensus       803 F~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~~  881 (1079)
T PLN02638        803 FKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGKF  881 (1079)
T ss_pred             hcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCc
Confidence            99999999999999999999999999999999999763 689999999999999999 9999999999999999999999


Q ss_pred             cchhh
Q 008144          547 LYPER  551 (576)
Q Consensus       547 ~~p~~  551 (576)
                      +||++
T Consensus       882 i~P~v  886 (1079)
T PLN02638        882 IIPQI  886 (1079)
T ss_pred             cCCCc
Confidence            99954

>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 Back     alignment and domain information
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B Back     alignment and domain information
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function Back     alignment and domain information
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase Back     alignment and domain information
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis Back     alignment and domain information
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional Back     alignment and domain information
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query576
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 46.0 bits (108), Expect = 3e-05
 Identities = 67/509 (13%), Positives = 130/509 (25%), Gaps = 203/509 (39%)

Query: 52  ILWLL---------VFASELL-LSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAID--V 99
           + W L          F  E+L +++ +L+                 +  + + P++   +
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYKFLM---------------SPIKTEQRQPSMMTRM 111

Query: 100 FICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVY------------LSDDGGSPITLHG 147
           +I   D        + N             K +V             L       + + G
Sbjct: 112 YIEQRDR-------LYNDN-------QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157

Query: 148 MR---------EACRFAK---------WWLPF--CRRYG-----IKTICPQA---YFSEA 179
           +          + C   K         +WL    C         ++ +  Q    + S +
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217

Query: 180 DSDD---------YFGDSEFMVEKK-----------KIKEKYEMFEEH----VT---KAV 212
           D                   +  K            +  + +  F       +T   K V
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV 277

Query: 213 EDGEYGNSQNHSTIIEIIQETFGESET---------IRQADL-VEM----PLLVYVSREK 258
            D     +  H ++      T    E           R  DL  E+    P  + +  E 
Sbjct: 278 TDFLSAATTTHISLDH-HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES 336

Query: 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQ-----AMCFHLDPK 313
             + L  +         +++ +I +S  +L         +P   R+     ++ F     
Sbjct: 337 IRDGLATWDNWKHVNCDKLTTIIESSLNVL---------EPAEYRKMFDRLSV-FPPSAH 386

Query: 314 ISSS-LAFV----------QFPQKFHN---INK---------YDIYD------------- 337
           I +  L+ +              K H    + K           IY              
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446

Query: 338 ----GRFRSAYCVQWQGMDGLKGPVLSG-----TGYYIKR----------ESLYADFTHT 378
                 +           D L  P L        G+++K             ++ DF   
Sbjct: 447 RSIVDHYNIPKTFDS---DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFL 503

Query: 379 ELK-----DTFGKSNVLINSLHQ--SYKQ 400
           E K       +  S  ++N+L Q   YK 
Sbjct: 504 EQKIRHDSTAWNASGSILNTLQQLKFYKP 532
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query576
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 100.0
3bcv_A240 Putative glycosyltransferase protein; protein stru 99.84
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 99.83
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.82
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 99.82
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 99.79
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 99.78
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.76
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 99.68
4fix_A657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 99.63
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 99.61
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 99.55
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 99.51
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 99.2
2bo4_A397 Mannosylglycerate synthase; catalysis, glycosyltra 99.0
2zu9_A394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 98.35
2wvl_A391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 98.32
1fo8_A343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 97.98
3lw6_A287 FI08434P, beta-4-galactosyltransferase 7; protein- 82.93
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=100.00  E-value=3.5e-48  Score=448.35  Aligned_cols=386  Identities=22%  Similarity=0.340  Sum_probs=314.6

Q ss_pred             HHHH-HHHHHHHHHHHHHHHHHhhcccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCc
Q 008144           19 INRL-HALLHCIAIGFLIYYRASYLLQET-RAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPA   96 (576)
Q Consensus        19 ~~r~-~~~~~~~~~~~yl~~R~~~~~~~~-~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~   96 (576)
                      +.|+ ++++.+++.+.|++||++.+++.. .+...++|++++++|++..+.|+++.+..++|..|...++.  .+++.|+
T Consensus        64 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P~  141 (802)
T 4hg6_A           64 VPRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELPT  141 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCCC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCCc
Confidence            3454 444444456899999999999854 35677888888999999999999999999999988766543  2467899


Q ss_pred             eEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccc
Q 008144           97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF  176 (576)
Q Consensus        97 VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf  176 (576)
                      |+|+|||||   |+++++.+||.|+++++||.++++|+|+|||++|.|.+.                             
T Consensus       142 VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~-----------------------------  189 (802)
T 4hg6_A          142 VDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS-----------------------------  189 (802)
T ss_dssp             EEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC-----------------------------
T ss_pred             EEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc-----------------------------
Confidence            999999999   887788999999999999999999999999999988531                             


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEec
Q 008144          177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSR  256 (576)
Q Consensus       177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~R  256 (576)
                               .+++.+++.++..+..+++..+                                         .++.|+.|
T Consensus       190 ---------~d~~i~~~~~~~~~~l~~~~~~-----------------------------------------~~v~~i~~  219 (802)
T 4hg6_A          190 ---------PDPELAQKAQERRRELQQLCRE-----------------------------------------LGVVYSTR  219 (802)
T ss_dssp             ---------SSHHHHHHHHHHHHHHHHHHHH-----------------------------------------HTCEEEEC
T ss_pred             ---------CCHHHHHHHHhhhHHHHHHHHh-----------------------------------------cCcEEEEe
Confidence                     1122222211111111111100                                         13678888


Q ss_pred             cCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCCcc--
Q 008144          257 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKY--  333 (576)
Q Consensus       257 ekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~--  333 (576)
                      ++    +++||++|+|.|++.    +++|||+++|||++++ ||+|++++..|. ||+    +++||+++.+.|.+..  
T Consensus       220 ~~----~~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp~----v~~V~~~~~~~~~~~~~~  286 (802)
T 4hg6_A          220 ER----NEHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVEDPD----LFLVQTPHFFINPDPIQR  286 (802)
T ss_dssp             SS----CCSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHHSSS----CCEEECCCCBSSCCHHHH
T ss_pred             cC----CCCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhcCCC----eEEEeccEEEeCCchHhh
Confidence            76    457999999999999    8999999999999997 999999999995 887    7899999999875310  


Q ss_pred             -----ChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCC
Q 008144          334 -----DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF  408 (576)
Q Consensus       334 -----d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~  408 (576)
                           ..+.+....++.....+.+.+++++++|+++++||++++++                                  
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~v----------------------------------  332 (802)
T 4hg6_A          287 NLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEA----------------------------------  332 (802)
T ss_dssp             HHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHH----------------------------------
T ss_pred             hhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHc----------------------------------
Confidence                 11122345678888899999999999999999999999865                                  


Q ss_pred             chhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhh
Q 008144          409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS  488 (576)
Q Consensus       409 ~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~  488 (576)
                                               +||++++++||.+++++++++||+++|++  ++.+++.+|+|++++++||.||++
T Consensus       333 -------------------------Ggf~~~~~~ED~~l~~rl~~~G~ri~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~  385 (802)
T 4hg6_A          333 -------------------------GGFAGETITEDAETALEIHSRGWKSLYID--RAMIAGLQPETFASFIQQRGRWAT  385 (802)
T ss_dssp             -------------------------TTCCCSSSSHHHHHHHHHHTTTCCEEECC--CCCEEECCCCSHHHHHHHHHHHHH
T ss_pred             -------------------------CCcCCCCcchHHHHHHHHHHcCCeEEEec--CCEEEecCCCCHHHHHHHHHHHHc
Confidence                                     58999999999999999999999999998  589999999999999999999999


Q ss_pred             hhHHHHhhhcCCcccCCCCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHhhhhHHHHH
Q 008144          489 GLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPLEVQS  566 (576)
Q Consensus       489 G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~  566 (576)
                      |.+|+++.+ +|++.+  ++++.||++|+...+++ +.+++.++++++|++++++|+.++......++.+.+|+.+.+
T Consensus       386 G~~q~l~~~-~pl~~~--~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l~~  459 (802)
T 4hg6_A          386 GMMQMLLLK-NPLFRR--GLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAVS  459 (802)
T ss_dssp             HHHHHHHHS-CTTSCS--SCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHh-CccccC--CCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHH
Confidence            999999854 677654  69999999999988888 888889999999999999999999888878888888887743
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query576
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.87
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 99.68
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 99.41
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 98.66
d1fo8a_343 N-acetylglucosaminyltransferase I {Rabbit (Oryctol 94.65
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=6.6e-22  Score=201.23  Aligned_cols=119  Identities=19%  Similarity=0.069  Sum_probs=95.2

Q ss_pred             CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccC
Q 008144           91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI  170 (576)
Q Consensus        91 ~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r  170 (576)
                      ++++|.|+|+||+||   |....+.+||.|++++.||....||+|+||||+|.|.....+.                   
T Consensus        18 ~~~~P~vSIIIp~yN---e~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~-------------------   75 (328)
T d1xhba2          18 PDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLES-------------------   75 (328)
T ss_dssp             CSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHH-------------------
T ss_pred             CCCCCCEEEEEeccC---CcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHH-------------------
Confidence            467899999999999   7656899999999999999866799999999999875422221                   


Q ss_pred             CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCc
Q 008144          171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL  250 (576)
Q Consensus       171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~  250 (576)
                                                    |.+                                          ...+.
T Consensus        76 ------------------------------~~~------------------------------------------~~~~~   83 (328)
T d1xhba2          76 ------------------------------YVK------------------------------------------KLKVP   83 (328)
T ss_dssp             ------------------------------HHH------------------------------------------SSSSC
T ss_pred             ------------------------------HHH------------------------------------------hcCCC
Confidence                                          000                                          00124


Q ss_pred             EEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCC
Q 008144          251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK  313 (576)
Q Consensus       251 l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~  313 (576)
                      +.++..++     +.|.++|.|.|++.    ++||||+++|+|.++. |++|.+++..|.+..
T Consensus        84 i~vi~~~~-----n~G~~~a~N~Gi~~----a~gd~i~flD~D~~~~-p~~l~~l~~~~~~~~  136 (328)
T d1xhba2          84 VHVIRMEQ-----RSGLIRARLKGAAV----SRGQVITFLDAHCECT-AGWLEPLLARIKHDR  136 (328)
T ss_dssp             EEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEEEESSEEEC-TTCHHHHHHHHHHCT
T ss_pred             eEEEEecc-----cccchHHHHHHHHh----hhcceeeecCcccccC-hhHHHHHHHHHhcCC
Confidence            66666554     36899999999999    9999999999999997 999999999988554
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure