Citrus Sinensis ID: 008172

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-----
MAVASDLVLSRGLIITKNPSISFKSHVSVTPILSKGCQKLKPKYCHLRTKAHAAEVQVLIDQENKHGLSLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQVKTIV
cccccHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccHHHHHcccccccccccEEEEcccccccHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccEEEEEEcccccEEEEEcccEEEEEEcccccccccEEEEcccccccccccccEEEEEccEEEEEEEEEEccEEEEEEEcccEEccccccccccccccccccccccccccccHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHccccccccEEEccccHHHHHcHHHHHHHccEEEEEccccccccccccccHHHHHHHHHHHHccccEEEccccHHHHHccccccccHHHHHHHHHHcccccEEccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHccccccEEEEEccHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHHHccccccccEEEEEccccccccccccEEEEEEEEEc
cccHHHHHHcccEEEEccccEEEcccccHHHHHccccccccccHHHcccccccHHcHcccccHHHHHHHHHHHHHHHcccccccccHccccEEEEEcccccccHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHHHHccccEEEEEccccccEccccccccEEEEEcccEEEEEEcccccccccEEEEEccccccccccccEEEEEccEEEEEEEEEcccEEEEEEEEccEEcccccccccccccccccEEccccccHHcHHHHHHHHcccccEEEEHHHccHHHHHHHHHHHHcccccccEEEEEEcccHHHHcHHHHHHHccEEEEEHHHHHHHcccccHHHHHHHHHHHHHHHcccEEEEccccHHHHccccccHHHHHHHHHHHHHcccEEEEcHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHccccccEEEEcccHHHHHHHHHHHcccEEEccccccHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccEEEEEEcEEc
MAVASDLVLsrgliitknpsisfkshvsvtpilskgcqklkpkychlrtKAHAAEVQVLIDQEnkhglslgfdavsegelrekgflglRKTKMVctigpaccsmEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMidtegsqihvvdhgepnsvkveedSIWLFTAIKfegsrpftvkanyagfsegievGDELVIDGGMASFEVIEKVGndlrckctdpgvflpraklsfrrngilvernhglptlskkdwddieFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVargdlgvdipleqipTVQEIIIHVCRQLNKPVIVASQLLESmveyptptraevADVSEAVRQYADALMLsgesaigpfgQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKhghmasllsrnrpnppifaftnddSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDltpahvtstAFQSIQVKTIV
mavasdlvlsrgliitknpsisfkshvsvTPILSKGCQKLKPKYCHLRTKAHAAEVQVLIDQENKHGLSLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIhvvdhgepnsvkVEEDSIWLFTAikfegsrpfTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTdpgvflpraklsfrrngilvernhglptlskkdwdDIEFGIAEGVDFIAMSFVCDADSVRHLKKyvsgkssrsikvLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHvtstafqsiqvktiv
MAVASDLVLSRGLIITKNPSISFKSHVSVTPILSKGCQKLKPKYCHLRTKAHAAEVQVLIDQENKHGLSLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQVKTIV
******LVLSRGLIITKNPSISFKSHVSVTPILSKGCQKLKPKYCHLRTKAHAAEVQVLIDQENKHGLSLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVL********************C***QLGESLHDRIAEQICNCAVDMANNLGVDAIFVYT*****************IFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQ*****
*******************SISF***************************************************************GLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSA*************RIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQVKTIV
MAVASDLVLSRGLIITKNPSISFKSHVSVTPILSKGCQKLKPKYCHLRTKAHAAEVQVLIDQENKHGLSLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQVKTIV
****SDLVLSRGLIITKNPSISFKSHVSVTPILSKGCQKLKPKYCHLRTKAHAAEVQVLIDQENKHGLSLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQVKTIV
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAVASDLVLSRGLIITKNPSISFKSHVSVTPILSKGCQKLKPKYCHLRTKAHAAEVQVLIDQENKHGLSLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQVKTIV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query575 2.2.26 [Sep-21-2011]
Q43117583 Pyruvate kinase isozyme A N/A no 0.862 0.850 0.595 1e-178
Q9LIK0596 Plastidial pyruvate kinas yes no 0.855 0.825 0.596 1e-176
Q40545593 Pyruvate kinase isozyme A N/A no 0.862 0.836 0.579 1e-172
Q9FLW9579 Plastidial pyruvate kinas no no 0.812 0.806 0.398 2e-92
Q40546562 Pyruvate kinase isozyme G N/A no 0.779 0.797 0.409 1e-89
Q93Z53571 Plastidial pyruvate kinas no no 0.768 0.774 0.424 8e-89
P51181 585 Pyruvate kinase OS=Bacill yes no 0.773 0.760 0.361 4e-72
Q02499 587 Pyruvate kinase OS=Geobac N/A no 0.806 0.790 0.342 7e-72
P80885 585 Pyruvate kinase OS=Bacill yes no 0.772 0.758 0.350 6e-70
Q8Z6K2470 Pyruvate kinase I OS=Salm N/A no 0.786 0.961 0.348 8e-70
>sp|Q43117|KPYA_RICCO Pyruvate kinase isozyme A, chloroplastic OS=Ricinus communis PE=1 SV=1 Back     alignment and function desciption
 Score =  625 bits (1613), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 303/509 (59%), Positives = 384/509 (75%), Gaps = 13/509 (2%)

Query: 69  SLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTRE 128
           S+  DAV+E EL+E GF   R+TK+VCTIGPA C  E+LE LA+GGMNVAR+NMCH TRE
Sbjct: 84  SIEVDAVTETELKENGFRSTRRTKLVCTIGPATCGFEELEALAVGGMNVARINMCHGTRE 143

Query: 129 WHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKFEGS 188
           WH  VI ++++LN EK F +++M+DTEGS+IH+ D G  +S K E+  IW F+   ++  
Sbjct: 144 WHKSVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDLGGASSAKAEDGEIWTFSVRAYDSP 203

Query: 189 RP-FTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSF 247
           RP  T+  NY GF+E ++VGDEL++DGGM  FEVIEK+G D++C+CTDPG+ LPRA L+F
Sbjct: 204 RPERTINVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTF 263

Query: 248 RRNGILV-ERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSR 306
            R+G LV ERN  LPT+S KDW DI+FGIAEGVDFIA+SFV  A+ + HLK Y++ +S  
Sbjct: 264 WRDGSLVRERNAMLPTISSKDWLDIDFGIAEGVDFIAISFVKSAEVINHLKSYIAARSRD 323

Query: 307 S-IKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNK 365
           S I V+AKIE+++SL+  EEI+ ASDG MVARGDLG  IPLEQ+P+ Q+ I+ VCRQLNK
Sbjct: 324 SDIAVIAKIESIDSLKNLEEIIRASDGAMVARGDLGAQIPLEQVPSAQQNIVQVCRQLNK 383

Query: 366 PVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMAS 425
           PVIVASQLLESM+EYPTPTRAEVADVSEAVRQ ADALMLSGESA+G + +KA++VL+  S
Sbjct: 384 PVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQYPEKALAVLRSVS 443

Query: 426 SRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMA 485
            R+E W REE    A+     +G +  D I+E+ICN A  MANNLGVDA+FVYTK GHMA
Sbjct: 444 VRIEKWWREEKHHEAM-ELPAIGSTYSDSISEEICNSAAKMANNLGVDALFVYTKDGHMA 502

Query: 486 SLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVK 545
           SLLSR RP+ PIFAFT   S R  LNLQWG+IP  ++ +DDME+N+ KT  L+K +GM+K
Sbjct: 503 SLLSRCRPDCPIFAFTTTTSVRRRLNLQWGLIPFRLSFADDMESNLNKTFSLLKARGMIK 562

Query: 546 YGDAVLVVLDLTPAHVTSTAFQSIQVKTI 574
            GD V+ V D+          QSIQV  +
Sbjct: 563 SGDLVIAVSDM---------LQSIQVMNV 582

Ricinus communis (taxid: 3988)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4EC: 0
>sp|Q9LIK0|PKP1_ARATH Plastidial pyruvate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=PKP1 PE=1 SV=1 Back     alignment and function description
>sp|Q40545|KPYA_TOBAC Pyruvate kinase isozyme A, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q9FLW9|PKP2_ARATH Plastidial pyruvate kinase 2 OS=Arabidopsis thaliana GN=PKP2 PE=1 SV=1 Back     alignment and function description
>sp|Q40546|KPYG_TOBAC Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q93Z53|PKP3_ARATH Plastidial pyruvate kinase 3, chloroplastic OS=Arabidopsis thaliana GN=PKP3 PE=1 SV=1 Back     alignment and function description
>sp|P51181|KPYK_BACLI Pyruvate kinase OS=Bacillus licheniformis GN=pyk PE=3 SV=1 Back     alignment and function description
>sp|Q02499|KPYK_GEOSE Pyruvate kinase OS=Geobacillus stearothermophilus GN=pyk PE=1 SV=2 Back     alignment and function description
>sp|P80885|KPYK_BACSU Pyruvate kinase OS=Bacillus subtilis (strain 168) GN=pyk PE=1 SV=2 Back     alignment and function description
>sp|Q8Z6K2|KPYK1_SALTI Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query575
225429183573 PREDICTED: pyruvate kinase isozyme A, ch 0.88 0.883 0.806 0.0
224060915574 predicted protein [Populus trichocarpa] 0.991 0.993 0.730 0.0
224105775574 predicted protein [Populus trichocarpa] 0.984 0.986 0.730 0.0
356575751582 PREDICTED: pyruvate kinase isozyme A, ch 0.991 0.979 0.709 0.0
356536073582 PREDICTED: pyruvate kinase isozyme A, ch 0.993 0.981 0.705 0.0
255562186582 pyruvate kinase, putative [Ricinus commu 0.933 0.922 0.730 0.0
449465101582 PREDICTED: plastidial pyruvate kinase 1, 0.979 0.967 0.683 0.0
449484392582 PREDICTED: plastidial pyruvate kinase 1, 0.979 0.967 0.683 0.0
255562184574 pyruvate kinase, putative [Ricinus commu 0.991 0.993 0.684 0.0
307135959582 pyruvate kinase [Cucumis melo subsp. mel 0.979 0.967 0.681 0.0
>gi|225429183|ref|XP_002275785.1| PREDICTED: pyruvate kinase isozyme A, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
 Score =  848 bits (2192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/507 (80%), Positives = 452/507 (89%), Gaps = 1/507 (0%)

Query: 69  SLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTRE 128
           +LGFD VSEGELREKGFLG+RKTK+VCTIGPACC +EDLE LA  GMNVARLNMCHNT E
Sbjct: 68  NLGFDVVSEGELREKGFLGMRKTKLVCTIGPACCLLEDLENLASSGMNVARLNMCHNTWE 127

Query: 129 WHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKFEGS 188
           WH DVIRKIK+LN EK +C+SVMIDTEG QIHVVDHG P SVK E +SIWLFT  KFEGS
Sbjct: 128 WHRDVIRKIKRLNEEKGYCVSVMIDTEGGQIHVVDHGAPFSVKAENESIWLFTTQKFEGS 187

Query: 189 RPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFR 248
           RPFTV+ANY GFSEGI VGDE+VIDGGMASFEVIEK+GNDLRCKCTDPG+ LPRAKLSF 
Sbjct: 188 RPFTVQANYEGFSEGITVGDEVVIDGGMASFEVIEKIGNDLRCKCTDPGLLLPRAKLSFW 247

Query: 249 RNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSI 308
           R+G LVE+N+ LPT+S KDW DIEFGI+EGVDFIAMSFV DA++++ LK Y+S KSS+SI
Sbjct: 248 RDGKLVEKNYELPTISTKDWADIEFGISEGVDFIAMSFVKDANAIKQLKSYLSNKSSKSI 307

Query: 309 KVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVI 368
            VLAKIE+LESLQ  EEI+EASDGIMVARGDLGV+IPLEQIP VQ  I HVCRQLN+PVI
Sbjct: 308 GVLAKIESLESLQHLEEIIEASDGIMVARGDLGVEIPLEQIPVVQAKITHVCRQLNRPVI 367

Query: 369 VASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRM 428
           VASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIG +GQKA+ VL+MASSRM
Sbjct: 368 VASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGQKALCVLRMASSRM 427

Query: 429 ELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLL 488
           ELWSREENRQSAL  QRQLG SL DRIAEQICNCAV+MA+NLGVDAIFVYTKHG MASLL
Sbjct: 428 ELWSREENRQSAL-HQRQLGVSLPDRIAEQICNCAVEMADNLGVDAIFVYTKHGQMASLL 486

Query: 489 SRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGD 548
           SRNRPN PIFAFT++ STRM++NLQWGV P+LV LS+DME NI KTIDLIKMKG+++ GD
Sbjct: 487 SRNRPNSPIFAFTDNHSTRMSMNLQWGVTPLLVELSEDMEANITKTIDLIKMKGVLEEGD 546

Query: 549 AVLVVLDLTPAHVTSTAFQSIQVKTIV 575
            VLVV D+TP+  T  AFQSIQVKTIV
Sbjct: 547 TVLVVSDITPSCATPKAFQSIQVKTIV 573

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224060915|ref|XP_002300287.1| predicted protein [Populus trichocarpa] gi|222847545|gb|EEE85092.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224105775|ref|XP_002313928.1| predicted protein [Populus trichocarpa] gi|222850336|gb|EEE87883.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356575751|ref|XP_003556000.1| PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356536073|ref|XP_003536565.1| PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|255562186|ref|XP_002522101.1| pyruvate kinase, putative [Ricinus communis] gi|223538700|gb|EEF40301.1| pyruvate kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449465101|ref|XP_004150267.1| PREDICTED: plastidial pyruvate kinase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449484392|ref|XP_004156869.1| PREDICTED: plastidial pyruvate kinase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255562184|ref|XP_002522100.1| pyruvate kinase, putative [Ricinus communis] gi|223538699|gb|EEF40300.1| pyruvate kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|307135959|gb|ADN33819.1| pyruvate kinase [Cucumis melo subsp. melo] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query575
TAIR|locus:2084583596 PKP-ALPHA [Arabidopsis thalian 0.84 0.810 0.607 8.9e-157
TAIR|locus:2176912579 PKP-BETA1 "plastidic pyruvate 0.815 0.810 0.400 6.9e-86
TAIR|locus:2033760571 PKp3 "plastidial pyruvate kina 0.773 0.779 0.427 3.6e-82
TIGR_CMR|CHY_1144 583 CHY_1144 "pyruvate kinase" [Ca 0.793 0.782 0.356 7e-70
UNIPROTKB|Q9KUN0470 VC_0485 "Pyruvate kinase" [Vib 0.796 0.974 0.352 1.7e-68
TIGR_CMR|VC_0485470 VC_0485 "pyruvate kinase I" [V 0.796 0.974 0.352 1.7e-68
TIGR_CMR|BA_4843 585 BA_4843 "pyruvate kinase" [Bac 0.810 0.796 0.347 2.1e-68
UNIPROTKB|P0AD61470 pykF "pyruvate kinase I monome 0.8 0.978 0.356 5.8e-66
ZFIN|ZDB-GENE-040801-230605 pkmb "pyruvate kinase, muscle, 0.796 0.757 0.340 7.4e-66
DICTYBASE|DDB_G0283247507 pyk "pyruvate kinase" [Dictyos 0.789 0.895 0.349 8.5e-65
TAIR|locus:2084583 PKP-ALPHA [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1528 (542.9 bits), Expect = 8.9e-157, P = 8.9e-157
 Identities = 296/487 (60%), Positives = 369/487 (75%)

Query:    73 DAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLD 132
             D V+E EL+E GF   R+TK++CTIGPA C  E LE LA+GGMNVARLNMCH TR+WH  
Sbjct:   101 DTVTEAELKENGFRSTRRTKLICTIGPATCGFEQLEALAVGGMNVARLNMCHGTRDWHRG 160

Query:   133 VIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKFEGSRPF- 191
             VIR +++LN EK F +++M+DTEGS+IH+ D G   S K E+  +W FT   F+ SRP  
Sbjct:   161 VIRSVRRLNEEKGFAVAIMMDTEGSEIHMGDLGGEASAKAEDGEVWTFTVRAFDSSRPER 220

Query:   192 TVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNG 251
             T+  +Y GF+E + VGDEL++DGGM  FEVIEK+G D++C CTDPG+ LPRA L+F R+G
Sbjct:   221 TISVSYDGFAEDVRVGDELLVDGGMVRFEVIEKIGPDVKCLCTDPGLLLPRANLTFWRDG 280

Query:   252 ILV-ERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKS-SRSIK 309
              LV ERN  LPT+S KDW DI+FGIAEGVDFIA+SFV  A+ + HLK Y++ +S    I 
Sbjct:   281 SLVRERNAMLPTISSKDWLDIDFGIAEGVDFIAVSFVKSAEVINHLKSYLAARSRGGEIG 340

Query:   310 VLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIV 369
             V+AKIE+++SL   EEI+ ASDG MVARGDLG  IPLEQ+P  Q+ I+ VCR LNKPVIV
Sbjct:   341 VIAKIESIDSLTNLEEIILASDGAMVARGDLGAQIPLEQVPAAQQRIVQVCRALNKPVIV 400

Query:   370 ASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRME 429
             ASQLLESM+EYPTPTRAEVADVSEAVRQ +DALMLSGESA+G F  KA++VL+  S R+E
Sbjct:   401 ASQLLESMIEYPTPTRAEVADVSEAVRQRSDALMLSGESAMGQFPDKALTVLRTVSLRIE 460

Query:   430 LWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLS 489
              W REE R  ++  Q  +G S  D+I+E+ICN A  MANNLGVDA+FVYT  GHMASL+S
Sbjct:   461 RWWREEKRHESVPLQA-IGSSFSDKISEEICNSAAKMANNLGVDAVFVYTTSGHMASLVS 519

Query:   490 RNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDA 549
             R RP+ PIFAFT   S R  LNLQWG+IP  ++ SDDME+N+ KT  L+K +GM+K GD 
Sbjct:   520 RCRPDCPIFAFTTTTSVRRRLNLQWGLIPFRLSFSDDMESNLNKTFSLLKSRGMIKSGDL 579

Query:   550 VLVVLDL 556
             V+ V D+
Sbjct:   580 VIAVSDM 586
GO:0000287 "magnesium ion binding" evidence=IEA;IDA
GO:0003824 "catalytic activity" evidence=IEA
GO:0004743 "pyruvate kinase activity" evidence=IEA;ISS;IDA
GO:0006096 "glycolysis" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0030955 "potassium ion binding" evidence=IEA;IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0010431 "seed maturation" evidence=IMP
GO:0006629 "lipid metabolic process" evidence=IGI
GO:0005829 "cytosol" evidence=RCA
GO:0009832 "plant-type cell wall biogenesis" evidence=RCA
GO:0016049 "cell growth" evidence=RCA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0030243 "cellulose metabolic process" evidence=RCA
TAIR|locus:2176912 PKP-BETA1 "plastidic pyruvate kinase beta subunit 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2033760 PKp3 "plastidial pyruvate kinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1144 CHY_1144 "pyruvate kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KUN0 VC_0485 "Pyruvate kinase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0485 VC_0485 "pyruvate kinase I" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4843 BA_4843 "pyruvate kinase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|P0AD61 pykF "pyruvate kinase I monomer" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040801-230 pkmb "pyruvate kinase, muscle, b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0283247 pyk "pyruvate kinase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LIK0PKP1_ARATH2, ., 7, ., 1, ., 4, 00.59600.85560.8255yesno
Q40545KPYA_TOBAC2, ., 7, ., 1, ., 4, 00.57950.86260.8364N/Ano
Q43117KPYA_RICCO2, ., 7, ., 1, ., 4, 00.59520.86260.8507N/Ano
P00548KPYK_CHICK2, ., 7, ., 1, ., 4, 00.33130.80170.8698yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.400.946
3rd Layer2.7.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00038611001
RecName- Full=Pyruvate kinase; EC=2.7.1.40; (573 aa)
(Vitis vinifera)
Predicted Functional Partners:
GPEPC
RecName- Full=Phosphoenolpyruvate carboxylase; EC=4.1.1.31; (965 aa)
     •• 0.925
GSVIVG00038473001
RecName- Full=Enolase; EC=4.2.1.11; (440 aa)
     •• 0.921
GSVIVG00009618001
RecName- Full=L-lactate dehydrogenase; EC=1.1.1.27; (350 aa)
     •• 0.920
Ndpk
RecName- Full=Nucleoside diphosphate kinase; EC=2.7.4.6; (148 aa)
     •• 0.916
NADP-ME
RecName- Full=Malic enzyme; (496 aa)
     •• 0.915
GSVIVG00035062001
SubName- Full=Chromosome chr1 scaffold_75, whole genome shotgun sequence; (221 aa)
     •• 0.913
GSVIVG00026376001
hypothetical protein LOC100248878 (320 aa)
     •• 0.912
GSVIVG00024180001
RecName- Full=Enolase; EC=4.2.1.11; (435 aa)
     •• 0.911
GSVIVG00017909001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (245 aa)
     •• 0.909
GSVIVG00019884001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (295 aa)
     •• 0.908

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query575
PLN02762509 PLN02762, PLN02762, pyruvate kinase complex alpha 0.0
COG0469477 COG0469, PykF, Pyruvate kinase [Carbohydrate trans 1e-128
TIGR01064473 TIGR01064, pyruv_kin, pyruvate kinase 1e-128
PRK05826465 PRK05826, PRK05826, pyruvate kinase; Provisional 1e-125
PLN02623581 PLN02623, PLN02623, pyruvate kinase 1e-122
cd00288480 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): La 1e-111
PRK06247476 PRK06247, PRK06247, pyruvate kinase; Provisional 4e-97
PRK09206470 PRK09206, PRK09206, pyruvate kinase; Provisional 2e-95
PRK06354 590 PRK06354, PRK06354, pyruvate kinase; Provisional 3e-92
PLN02461511 PLN02461, PLN02461, Probable pyruvate kinase 3e-87
pfam00224348 pfam00224, PK, Pyruvate kinase, barrel domain 3e-86
PTZ00066513 PTZ00066, PTZ00066, pyruvate kinase; Provisional 2e-85
PRK06739352 PRK06739, PRK06739, pyruvate kinase; Validated 3e-64
PTZ00300454 PTZ00300, PTZ00300, pyruvate kinase; Provisional 7e-64
PLN02765526 PLN02765, PLN02765, pyruvate kinase 2e-61
PRK08187493 PRK08187, PRK08187, pyruvate kinase; Validated 4e-26
PRK14725608 PRK14725, PRK14725, pyruvate kinase; Provisional 7e-26
pfam02887117 pfam02887, PK_C, Pyruvate kinase, alpha/beta domai 1e-21
>gnl|CDD|215407 PLN02762, PLN02762, pyruvate kinase complex alpha subunit Back     alignment and domain information 
 Score =  927 bits (2399), Expect = 0.0
 Identities = 333/510 (65%), Positives = 402/510 (78%), Gaps = 8/510 (1%)

Query: 69  SLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTRE 128
            +  D V+E ELRE GF   R+TK+VCTIGPACC  E LE LAMGGMNVARLNMCH TRE
Sbjct: 5   GIDVDVVTEAELRENGFRSTRRTKLVCTIGPACCGFEQLEALAMGGMNVARLNMCHGTRE 64

Query: 129 WHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKFEGS 188
           WH DVIR++++LN EK F ++VM+DTEGS+IH+ D G  +S K E+   W FT  KF+GS
Sbjct: 65  WHRDVIRRVRRLNEEKGFAVAVMMDTEGSEIHMGDLGGASSAKAEDGEEWTFTVRKFDGS 124

Query: 189 RP-FTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSF 247
           RP FT++ NY GF+E ++VGDELV+DGGM  FEVIEK+G D++CKCTDPG+ LPRA L+F
Sbjct: 125 RPEFTIQVNYDGFAEDVKVGDELVVDGGMVRFEVIEKIGPDVKCKCTDPGLLLPRANLTF 184

Query: 248 RRNGILV-ERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSS- 305
            R+G LV ERN  LPT+S KDW DI+FGI+EGVDFIA+SFV  A+ ++HLK Y++ +S  
Sbjct: 185 WRDGSLVRERNAMLPTISSKDWLDIDFGISEGVDFIAVSFVKSAEVIKHLKSYIAARSRD 244

Query: 306 RSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNK 365
             I V+AKIE+L+SL+  EEI+ ASDG MVARGDLG  IPLEQ+P+VQE I+ +CRQLNK
Sbjct: 245 SDIGVIAKIESLDSLKNLEEIIRASDGAMVARGDLGAQIPLEQVPSVQEKIVRLCRQLNK 304

Query: 366 PVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMAS 425
           PVIVASQLLESM+EYPTPTRAEVADVSEAVRQ ADALMLSGESA+G + +KA+SVL+  S
Sbjct: 305 PVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGLYPEKALSVLRSVS 364

Query: 426 SRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMA 485
            RMELWSREE R  AL    QL  SL DRI+E+ICN A  MANNLGVDAIFVYTKHGHMA
Sbjct: 365 LRMELWSREEKRHEAL-ELPQLSSSLSDRISEEICNSAAKMANNLGVDAIFVYTKHGHMA 423

Query: 486 SLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVK 545
           SLLSRNRP+ PIFAFT+  S R  LNLQWG+IP  ++ SDDME+N+ KT  L+K +GM+K
Sbjct: 424 SLLSRNRPDCPIFAFTDTTSVRRRLNLQWGLIPFRLDFSDDMESNLNKTFSLLKARGMIK 483

Query: 546 YGDAVLVVLDLTPAHVTSTAFQSIQVKTIV 575
            GD V+ V DLTP    S+  QSIQV+ + 
Sbjct: 484 SGDLVIAVSDLTP----SSMLQSIQVRNVP 509

Length = 509
>gnl|CDD|223545 COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233257 TIGR01064, pyruv_kin, pyruvate kinase Back     alignment and domain information
>gnl|CDD|235619 PRK05826, PRK05826, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215334 PLN02623, PLN02623, pyruvate kinase Back     alignment and domain information
>gnl|CDD|238178 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>gnl|CDD|180487 PRK06247, PRK06247, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|181699 PRK09206, PRK09206, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|235784 PRK06354, PRK06354, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215255 PLN02461, PLN02461, Probable pyruvate kinase Back     alignment and domain information
>gnl|CDD|215802 pfam00224, PK, Pyruvate kinase, barrel domain Back     alignment and domain information
>gnl|CDD|173361 PTZ00066, PTZ00066, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|180676 PRK06739, PRK06739, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|140321 PTZ00300, PTZ00300, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215409 PLN02765, PLN02765, pyruvate kinase Back     alignment and domain information
>gnl|CDD|236178 PRK08187, PRK08187, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|237804 PRK14725, PRK14725, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|217269 pfam02887, PK_C, Pyruvate kinase, alpha/beta domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 575
PLN02762509 pyruvate kinase complex alpha subunit 100.0
PTZ00066513 pyruvate kinase; Provisional 100.0
PRK09206470 pyruvate kinase; Provisional 100.0
COG0469477 PykF Pyruvate kinase [Carbohydrate transport and m 100.0
PLN02461511 Probable pyruvate kinase 100.0
PRK06247476 pyruvate kinase; Provisional 100.0
PLN02765526 pyruvate kinase 100.0
PRK06354 590 pyruvate kinase; Provisional 100.0
cd00288480 Pyruvate_Kinase Pyruvate kinase (PK): Large allost 100.0
PRK05826465 pyruvate kinase; Provisional 100.0
PLN02623581 pyruvate kinase 100.0
PTZ00300454 pyruvate kinase; Provisional 100.0
TIGR01064473 pyruv_kin pyruvate kinase. This enzyme is a homote 100.0
KOG2323501 consensus Pyruvate kinase [Carbohydrate transport 100.0
PRK06739352 pyruvate kinase; Validated 100.0
PF00224348 PK: Pyruvate kinase, barrel domain; InterPro: IPR0 100.0
PRK14725608 pyruvate kinase; Provisional 100.0
PRK08187493 pyruvate kinase; Validated 100.0
PF02887117 PK_C: Pyruvate kinase, alpha/beta domain; InterPro 99.96
TIGR03239249 GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co 99.66
PRK10558256 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro 99.66
PRK10128267 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional 99.63
COG3836255 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.61
TIGR02311249 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.55
PF03328221 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family 99.36
PRK06464795 phosphoenolpyruvate synthase; Validated 99.25
TIGR01418782 PEP_synth phosphoenolpyruvate synthase. Also calle 99.23
TIGR01417565 PTS_I_fam phosphoenolpyruvate-protein phosphotrans 99.09
PRK11177575 phosphoenolpyruvate-protein phosphotransferase; Pr 98.98
TIGR01588288 citE citrate lyase, beta subunit. This is a model 98.98
PF02896293 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel 98.07
COG2301283 CitE Citrate lyase beta subunit [Carbohydrate tran 97.92
cd00480511 malate_synt Malate synthase catalyzes the Claisen 97.66
PRK09255531 malate synthase; Validated 97.56
cd00727511 malate_synt_A Malate synthase A (MSA), present in 97.5
TIGR01344511 malate_syn_A malate synthase A. This model represe 97.21
PRK11061748 fused phosphoenolpyruvate-protein phosphotransfera 97.12
PRK08649368 inosine 5-monophosphate dehydrogenase; Validated 96.91
COG1080574 PtsA Phosphoenolpyruvate-protein kinase (PTS syste 96.51
PLN02626551 malate synthase 96.45
TIGR01828856 pyru_phos_dikin pyruvate, phosphate dikinase. This 96.37
TIGR01304369 IMP_DH_rel_2 IMP dehydrogenase family protein. Thi 96.13
cd00381325 IMPDH IMPDH: The catalytic domain of the inosine m 95.97
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 95.81
COG3605756 PtsP Signal transduction protein containing GAF an 95.31
TIGR02751506 PEPCase_arch phosphoenolpyruvate carboxylase, arch 95.23
PTZ00314495 inosine-5'-monophosphate dehydrogenase; Provisiona 94.93
PRK09279879 pyruvate phosphate dikinase; Provisional 94.75
PLN02274505 inosine-5'-monophosphate dehydrogenase 94.34
TIGR01302450 IMP_dehydrog inosine-5'-monophosphate dehydrogenas 94.33
TIGR01305343 GMP_reduct_1 guanosine monophosphate reductase, eu 94.23
PRK13655494 phosphoenolpyruvate carboxylase; Provisional 93.61
TIGR03151307 enACPred_II putative enoyl-(acyl-carrier-protein) 93.51
PRK06843404 inosine 5-monophosphate dehydrogenase; Validated 93.36
cd00429211 RPE Ribulose-5-phosphate 3-epimerase (RPE). This e 93.13
PRK07807479 inosine 5-monophosphate dehydrogenase; Validated 93.03
TIGR01306321 GMP_reduct_2 guanosine monophosphate reductase, ba 92.93
PRK01130221 N-acetylmannosamine-6-phosphate 2-epimerase; Provi 92.58
PRK13125244 trpA tryptophan synthase subunit alpha; Provisiona 92.57
PRK05096346 guanosine 5'-monophosphate oxidoreductase; Provisi 92.45
PRK05458326 guanosine 5'-monophosphate oxidoreductase; Provisi 92.07
cd04730236 NPD_like 2-Nitropropane dioxygenase (NPD), one of 92.06
PRK07107502 inosine 5-monophosphate dehydrogenase; Validated 91.63
TIGR03128206 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the 90.94
cd04740296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 90.94
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 90.88
PRK08227264 autoinducer 2 aldolase; Validated 90.43
cd07944266 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase- 89.93
COG0574740 PpsA Phosphoenolpyruvate synthase/pyruvate phospha 89.83
CHL00200263 trpA tryptophan synthase alpha subunit; Provisiona 89.65
cd02940299 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FM 89.38
PRK00009 911 phosphoenolpyruvate carboxylase; Reviewed 89.32
cd04722200 TIM_phosphate_binding TIM barrel proteins share a 89.17
TIGR01163210 rpe ribulose-phosphate 3-epimerase. This family co 89.11
cd04729219 NanE N-acetylmannosamine-6-phosphate epimerase (Na 88.86
PRK05581220 ribulose-phosphate 3-epimerase; Validated 88.84
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 88.72
PLN02591250 tryptophan synthase 88.68
cd00331217 IGPS Indole-3-glycerol phosphate synthase (IGPS); 88.53
PRK13813215 orotidine 5'-phosphate decarboxylase; Provisional 88.26
PRK15452 443 putative protease; Provisional 88.18
PRK13397250 3-deoxy-7-phosphoheptulonate synthase; Provisional 88.03
PRK04302223 triosephosphate isomerase; Provisional 87.75
PTZ00170228 D-ribulose-5-phosphate 3-epimerase; Provisional 87.57
PRK05567486 inosine 5'-monophosphate dehydrogenase; Reviewed 87.46
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 87.34
cd03174265 DRE_TIM_metallolyase DRE-TIM metallolyase superfam 87.0
PRK02290344 3-dehydroquinate synthase; Provisional 86.94
cd04732234 HisA HisA. Phosphoribosylformimino-5-aminoimidazol 86.8
TIGR01361260 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate 86.71
PRK09722229 allulose-6-phosphate 3-epimerase; Provisional 86.6
PTZ00398 974 phosphoenolpyruvate carboxylase; Provisional 86.58
TIGR01303475 IMP_DH_rel_1 IMP dehydrogenase family protein. Thi 86.57
PRK08318420 dihydropyrimidine dehydrogenase subunit B; Validat 86.53
TIGR00262256 trpA tryptophan synthase, alpha subunit. Tryptopha 86.41
PRK15447301 putative protease; Provisional 86.37
PRK13398266 3-deoxy-7-phosphoheptulonate synthase; Provisional 86.29
PRK13307391 bifunctional formaldehyde-activating enzyme/3-hexu 86.27
TIGR00007230 phosphoribosylformimino-5-aminoimidazole carboxami 86.19
cd00452190 KDPG_aldolase KDPG and KHG aldolase. This family b 86.06
PRK07565334 dihydroorotate dehydrogenase 2; Reviewed 86.01
cd00945201 Aldolase_Class_I Class I aldolases. The class I al 85.88
PRK08745223 ribulose-phosphate 3-epimerase; Provisional 85.85
PRK02048 611 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 85.79
PRK07695201 transcriptional regulator TenI; Provisional 85.71
TIGR02090363 LEU1_arch isopropylmalate/citramalate/homocitrate 85.49
PRK08883220 ribulose-phosphate 3-epimerase; Provisional 85.42
PF00290259 Trp_syntA: Tryptophan synthase alpha chain; InterP 85.26
PLN02334229 ribulose-phosphate 3-epimerase 85.18
PF01959354 DHQS: 3-dehydroquinate synthase (EC 4.6.1.3); Inte 84.83
PRK07028430 bifunctional hexulose-6-phosphate synthase/ribonuc 83.87
COG1751186 Uncharacterized conserved protein [Function unknow 83.81
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 83.76
cd07939259 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and 83.51
PRK00915 513 2-isopropylmalate synthase; Validated 83.47
PRK06852304 aldolase; Validated 83.28
PRK07259301 dihydroorotate dehydrogenase 1B; Reviewed 83.19
cd02803327 OYE_like_FMN_family Old yellow enzyme (OYE)-like F 83.17
PF04551359 GcpE: GcpE protein; InterPro: IPR004588 This prote 83.06
PRK00278260 trpC indole-3-glycerol-phosphate synthase; Reviewe 82.61
PF03060330 NMO: Nitronate monooxygenase; InterPro: IPR004136 82.55
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 82.31
KOG2550503 consensus IMP dehydrogenase/GMP reductase [Nucleot 82.26
cd00945201 Aldolase_Class_I Class I aldolases. The class I al 82.25
COG0826347 Collagenase and related proteases [Posttranslation 82.13
TIGR02320285 PEP_mutase phosphoenolpyruvate phosphomutase. A cl 81.78
PRK12595360 bifunctional 3-deoxy-7-phosphoheptulonate synthase 81.39
cd04727283 pdxS PdxS is a subunit of the pyridoxal 5'-phospha 81.14
COG1465376 Predicted alternative 3-dehydroquinate synthase [A 80.95
PRK13396352 3-deoxy-7-phosphoheptulonate synthase; Provisional 80.65
PF14010491 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3 80.45
>PLN02762 pyruvate kinase complex alpha subunit Back     alignment and domain information 
Probab=100.00  E-value=1.2e-139  Score=1137.03  Aligned_cols=502  Identities=66%  Similarity=1.061  Sum_probs=461.0

Q ss_pred             cccccccchhhhhhcccCCCCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCce
Q 008172           69 SLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCI  148 (575)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i  148 (575)
                      .+|.|....+.+.+.|+.++|+|||||||||+|+++|+|++|+++|||+||||||||++|+|+++++++|+++++.|+++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~rrTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~v   84 (509)
T PLN02762          5 GIDVDVVTEAELRENGFRSTRRTKLVCTIGPACCGFEQLEALAMGGMNVARLNMCHGTREWHRDVIRRVRRLNEEKGFAV   84 (509)
T ss_pred             cccccccchhhhhhccccCCCCceEEEEeCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCce
Confidence            35556666777888887668999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCCeEEEEecCCCCceEEecCCEEEEEeeccCCC-CCcEEEecccccccccCCCCEEEEeCCeeEEEEEEEECC
Q 008172          149 SVMIDTEGSQIHVVDHGEPNSVKVEEDSIWLFTAIKFEGS-RPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGN  227 (575)
Q Consensus       149 ~Il~Dl~GpkIRtG~~~~~~~i~l~~G~~v~lt~~~~~~~-~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~  227 (575)
                      +||+||||||||+|.+.++.++.|++|+.|+|+.+...+. .++.+++||++|++++++||.||+|||+|.|+|++++++
T Consensus        85 aIl~Dl~GPkIR~g~~~~~~~i~l~~G~~v~lt~~~~~g~~~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~~~~~  164 (509)
T PLN02762         85 AVMMDTEGSEIHMGDLGGASSAKAEDGEEWTFTVRKFDGSRPEFTIQVNYDGFAEDVKVGDELVVDGGMVRFEVIEKIGP  164 (509)
T ss_pred             EEEecCCCCceEEEecCCCccEEecCCCEEEEeCCccCCCCCCcEEeechHHHHHhcCCCCEEEEeCCEEEEEEEEEECC
Confidence            9999999999999999765579999999999988754443 247899999999999999999999999999999999999


Q ss_pred             eEEEEEecCeEecCCcccccccCcccc-cccccCCCCCccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCC-
Q 008172          228 DLRCKCTDPGVFLPRAKLSFRRNGILV-ERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSS-  305 (575)
Q Consensus       228 ~i~~~V~~gG~l~s~K~vn~~r~g~~~-~~~~~lp~lsekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~-  305 (575)
                      .+.|+|.+||.|+++||||+.++|+.+ ++.+++|.|||||++||+||+++|+|||++||||+++||+++|+++.+.|. 
T Consensus       165 ~v~~~v~~~G~l~~~KgvNl~~~g~~~p~~~~~lp~ltekD~~di~f~~~~~vD~ia~SFVr~a~Dv~~~r~~l~~~g~~  244 (509)
T PLN02762        165 DVKCKCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISSKDWLDIDFGISEGVDFIAVSFVKSAEVIKHLKSYIAARSRD  244 (509)
T ss_pred             EEEEEEEeCcEEcCCCceeeccccCCCCCCccCCCCCCHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCC
Confidence            999999999999999999997666664 999999999999999999999999999999999999999999999988763 


Q ss_pred             CCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCCh
Q 008172          306 RSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTR  385 (575)
Q Consensus       306 ~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~Ptr  385 (575)
                      .+++||||||+++|++|||||++++|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||
T Consensus       245 ~~~~IiAKIE~~~av~nl~eIi~~sDgiMVARGDLGvEip~e~vp~~QK~II~~c~~~gKPVIvATQmLeSMi~np~PTR  324 (509)
T PLN02762        245 SDIGVIAKIESLDSLKNLEEIIRASDGAMVARGDLGAQIPLEQVPSVQEKIVRLCRQLNKPVIVASQLLESMIEYPTPTR  324 (509)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhcCEEEEecCccccccCHHHhHHHHHHHHHHHHHhCCCEEEECchHHhhhhCCCCCc
Confidence            27999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCCCCchhhHHHHHHHH
Q 008172          386 AEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESLHDRIAEQICNCAVD  465 (575)
Q Consensus       386 AEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~  465 (575)
                      ||++||||||+||+||+|||||||+|+||+|||++|++||+++|++..+...|..+ ..++.....+.+..+++|.+|++
T Consensus       325 AEvsDVaNAVlDGtDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~-~~~~~~~~~~~~~~~aia~sa~~  403 (509)
T PLN02762        325 AEVADVSEAVRQRADALMLSGESAMGLYPEKALSVLRSVSLRMELWSREEKRHEAL-ELPQLSSSLSDRISEEICNSAAK  403 (509)
T ss_pred             hhHHHHHHHHHhCCCEEEEcchhcCCCCHHHHHHHHHHHHHHHHhhhhhcchhhhh-hhhccccccccchHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999864322111111 11111111113467999999999


Q ss_pred             HHHhcCCcEEEEEcCChhHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCCCCHHHHHHHHHHHHHHcCCCC
Q 008172          466 MANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVK  545 (575)
Q Consensus       466 ~a~~~~AkaIVVfT~SG~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~~d~d~~i~~al~~~~~~g~~k  545 (575)
                      +|.+++|++||+||.||+||+++|||||.+||||+|++++++|||+|+|||+|++.++..+.+++++.+++++++.|+++
T Consensus       404 ~A~~l~a~aIv~~T~sG~tA~~iSk~RP~~pIia~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~~~g~~~  483 (509)
T PLN02762        404 MANNLGVDAIFVYTKHGHMASLLSRNRPDCPIFAFTDTTSVRRRLNLQWGLIPFRLDFSDDMESNLNKTFSLLKARGMIK  483 (509)
T ss_pred             HHhhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEECCCHHHHHHhhcccCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999888899999999999999999999


Q ss_pred             CCCEEEEEecCCCCCCCccccceEEEEEcC
Q 008172          546 YGDAVLVVLDLTPAHVTSTAFQSIQVKTIV  575 (575)
Q Consensus       546 ~GD~VVvv~G~~~~~g~t~~~~~i~v~~v~  575 (575)
                      +||.||+++|+|. +|+|   |+|+|++||
T Consensus       484 ~GD~VVv~~g~~~-~g~t---n~i~v~~v~  509 (509)
T PLN02762        484 SGDLVIAVSDLTP-SSML---QSIQVRNVP  509 (509)
T ss_pred             CCCEEEEEeCCCC-CCCc---eEEEEEEcC
Confidence            9999999999998 8888   999999997

>PTZ00066 pyruvate kinase; Provisional Back     alignment and domain information
>PRK09206 pyruvate kinase; Provisional Back     alignment and domain information
>COG0469 PykF Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02461 Probable pyruvate kinase Back     alignment and domain information
>PRK06247 pyruvate kinase; Provisional Back     alignment and domain information
>PLN02765 pyruvate kinase Back     alignment and domain information
>PRK06354 pyruvate kinase; Provisional Back     alignment and domain information
>cd00288 Pyruvate_Kinase Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>PRK05826 pyruvate kinase; Provisional Back     alignment and domain information
>PLN02623 pyruvate kinase Back     alignment and domain information
>PTZ00300 pyruvate kinase; Provisional Back     alignment and domain information
>TIGR01064 pyruv_kin pyruvate kinase Back     alignment and domain information
>KOG2323 consensus Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK06739 pyruvate kinase; Validated Back     alignment and domain information
>PF00224 PK: Pyruvate kinase, barrel domain; InterPro: IPR015793 Pyruvate kinase (2 Back     alignment and domain information
>PRK14725 pyruvate kinase; Provisional Back     alignment and domain information
>PRK08187 pyruvate kinase; Validated Back     alignment and domain information
>PF02887 PK_C: Pyruvate kinase, alpha/beta domain; InterPro: IPR015795 Pyruvate kinase (2 Back     alignment and domain information
>TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase Back     alignment and domain information
>PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional Back     alignment and domain information
>PRK10128 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional Back     alignment and domain information
>COG3836 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Back     alignment and domain information
>PF03328 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family; InterPro: IPR005000 This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (4 Back     alignment and domain information
>PRK06464 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>TIGR01418 PEP_synth phosphoenolpyruvate synthase Back     alignment and domain information
>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase Back     alignment and domain information
>PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional Back     alignment and domain information
>TIGR01588 citE citrate lyase, beta subunit Back     alignment and domain information
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ] Back     alignment and domain information
>COG2301 CitE Citrate lyase beta subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00480 malate_synt Malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to malyl-CoA , which hydrolyzes to malate and CoA Back     alignment and domain information
>PRK09255 malate synthase; Validated Back     alignment and domain information
>cd00727 malate_synt_A Malate synthase A (MSA), present in some bacteria, plants and fungi Back     alignment and domain information
>TIGR01344 malate_syn_A malate synthase A Back     alignment and domain information
>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional Back     alignment and domain information
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02626 malate synthase Back     alignment and domain information
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase Back     alignment and domain information
>TIGR01304 IMP_DH_rel_2 IMP dehydrogenase family protein Back     alignment and domain information
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms] Back     alignment and domain information
>TIGR02751 PEPCase_arch phosphoenolpyruvate carboxylase, archaeal type Back     alignment and domain information
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK09279 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>PLN02274 inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic Back     alignment and domain information
>PRK13655 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II Back     alignment and domain information
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE) Back     alignment and domain information
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial Back     alignment and domain information
>PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional Back     alignment and domain information
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional Back     alignment and domain information
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>cd04730 NPD_like 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites Back     alignment and domain information
>PRK07107 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>PRK08227 autoinducer 2 aldolase; Validated Back     alignment and domain information
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>COG0574 PpsA Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional Back     alignment and domain information
>cd02940 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>PRK00009 phosphoenolpyruvate carboxylase; Reviewed Back     alignment and domain information
>cd04722 TIM_phosphate_binding TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure Back     alignment and domain information
>TIGR01163 rpe ribulose-phosphate 3-epimerase Back     alignment and domain information
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate Back     alignment and domain information
>PRK05581 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>PLN02591 tryptophan synthase Back     alignment and domain information
>cd00331 IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water Back     alignment and domain information
>PRK13813 orotidine 5'-phosphate decarboxylase; Provisional Back     alignment and domain information
>PRK15452 putative protease; Provisional Back     alignment and domain information
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>PRK04302 triosephosphate isomerase; Provisional Back     alignment and domain information
>PTZ00170 D-ribulose-5-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily Back     alignment and domain information
>PRK02290 3-dehydroquinate synthase; Provisional Back     alignment and domain information
>cd04732 HisA HisA Back     alignment and domain information
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase Back     alignment and domain information
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PTZ00398 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein Back     alignment and domain information
>PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated Back     alignment and domain information
>TIGR00262 trpA tryptophan synthase, alpha subunit Back     alignment and domain information
>PRK15447 putative protease; Provisional Back     alignment and domain information
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional Back     alignment and domain information
>TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Back     alignment and domain information
>cd00452 KDPG_aldolase KDPG and KHG aldolase Back     alignment and domain information
>PRK07565 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>cd00945 Aldolase_Class_I Class I aldolases Back     alignment and domain information
>PRK08745 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional Back     alignment and domain information
>PRK07695 transcriptional regulator TenI; Provisional Back     alignment and domain information
>TIGR02090 LEU1_arch isopropylmalate/citramalate/homocitrate synthases Back     alignment and domain information
>PRK08883 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4 Back     alignment and domain information
>PLN02334 ribulose-phosphate 3-epimerase Back     alignment and domain information
>PF01959 DHQS: 3-dehydroquinate synthase (EC 4 Back     alignment and domain information
>PRK07028 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated Back     alignment and domain information
>COG1751 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>cd07939 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>PRK00915 2-isopropylmalate synthase; Validated Back     alignment and domain information
>PRK06852 aldolase; Validated Back     alignment and domain information
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed Back     alignment and domain information
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli Back     alignment and domain information
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed Back     alignment and domain information
>PF03060 NMO: Nitronate monooxygenase; InterPro: IPR004136 2-Nitropropane dioxygenase (1 Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd00945 Aldolase_Class_I Class I aldolases Back     alignment and domain information
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02320 PEP_mutase phosphoenolpyruvate phosphomutase Back     alignment and domain information
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed Back     alignment and domain information
>cd04727 pdxS PdxS is a subunit of the pyridoxal 5'-phosphate (PLP) synthase, an important enzyme in deoxyxylulose 5-phosphate (DXP)-independent pathway for de novo biosynthesis of PLP, present in some eubacteria, in archaea, fungi, plants, plasmodia, and some metazoa Back     alignment and domain information
>COG1465 Predicted alternative 3-dehydroquinate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>PF14010 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3ODM_C Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query575
2e28_A 587 Crystal Structure Analysis Of Pyruvate Kinase From 6e-71
1pky_A470 Pyruvate Kinase From E. Coli In The T-State Length 3e-70
1e0u_A470 Structure R271l Mutant Of E. Coli Pyruvate Kinase L 1e-69
1e0t_A470 R292d Mutant Of E. Coli Pyruvate Kinase Length = 47 3e-69
3t05_A 606 Crystal Structure Of S. Aureus Pyruvate Kinase Leng 1e-66
1zjh_A548 Structure Of Human Muscle Pyruvate Kinase (Pkm2) Le 7e-65
3g2g_A533 S437y Mutant Of Human Muscle Pyruvate Kinase, Isofo 8e-65
1pkm_A530 The Refined Three-Dimensional Structure Of Cat Musc 8e-65
3gqy_A550 Activator-Bound Structure Of Human Pyruvate Kinase 9e-65
1t5a_A567 Human Pyruvate Kinase M2 Length = 567 9e-65
3srd_A551 Human M2 Pyruvate Kinase In Complex With Fructose 1 9e-65
4g1n_A518 Pkm2 In Complex With An Activator Length = 518 1e-64
3bjf_A518 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 1e-64
3bjt_A530 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 1e-64
3u2z_A533 Activator-Bound Structure Of Human Pyruvate Kinase 1e-64
4b2d_D548 Human Pkm2 With L-serine And Fbp Bound Length = 548 1e-64
3srf_C551 Human M1 Pyruvate Kinase Length = 551 3e-64
3n25_A531 The Structure Of Muscle Pyruvate Kinase In Complex 4e-64
1f3w_A530 Recombinant Rabbit Muscle Pyruvate Kinase Length = 4e-64
1aqf_A530 Pyruvate Kinase From Rabbit Muscle With Mg, K, And 4e-64
2g50_A530 The Location Of The Allosteric Amino Acid Binding S 4e-64
2vgg_A528 Human Erythrocyte Pyruvate Kinase: R479h Mutant Len 4e-64
1f3x_A530 S402p Mutant Of Rabbit Muscle Pyruvate Kinase Lengt 5e-64
1pkn_A530 Structure Of Rabbit Muscle Pyruvate Kinase Complexe 6e-64
4ip7_A543 Structure Of The S12d Variant Of Human Liver Pyruva 3e-63
2vgb_A528 Human Erythrocyte Pyruvate Kinase Length = 528 4e-63
2vgf_A528 Human Erythrocyte Pyruvate Kinase: T384m Mutant Len 2e-62
4ima_A543 The Structure Of C436m-hlpyk In Complex With Citrat 3e-62
2vgi_A528 Human Erythrocyte Pyruvate Kinase: R486w Mutant Len 4e-62
3pp7_A498 Crystal Structure Of Leishmania Mexicana Pyruvate K 1e-61
1pkl_A499 The Structure Of Leishmania Pyruvate Kinase Length 1e-61
3e0v_A539 Crystal Structure Of Pyruvate Kinase From Leishmani 1e-61
3khd_A520 Crystal Structure Of Pff1300w. Length = 520 1e-60
3qv9_A499 Crystal Structure Of Trypanosoma Cruzi Pyruvate Kin 5e-60
3eoe_A511 Crystal Structure Of Pyruvate Kinase From Toxoplasm 2e-59
4drs_A526 Crystal Structure Of Cryptosporidium Parvum Pyruvat 2e-57
3ma8_A534 Crystal Structure Of Cgd1_2040, A Pyruvate Kinase F 3e-57
1a3w_A500 Pyruvate Kinase From Saccharomyces Cerevisiae Compl 8e-51
3qtg_A461 Crystal Structure Of Pyruvate Kinase From Pyrobacul 1e-32
>pdb|2E28|A Chain A, Crystal Structure Analysis Of Pyruvate Kinase From Bacillus Stearothermophilus Length = 587 Back     alignment and structure 
Iteration: 1

 Score =  265 bits (677), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 166/490 (33%), Positives = 269/490 (54%), Gaps = 26/490 (5%)
Query: 89  RKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCI 148
           RKTK+V TIGPA  S++ L +L   GMNVARLN  H   E H   I  I++        +
Sbjct: 3   RKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTV 62
Query: 149 SVMIDTEGSQI--HVVDHGEPNSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEV 206
           ++++DT+G +I  H +++G   +++++E S  + +  +  G+ P  +   Y    + + V
Sbjct: 63  AILLDTKGPEIRTHNMENG---AIELKEGSKLVISMSEVLGT-PEKISVTYPSLIDDVSV 118
Query: 207 GDELVIDGGMASFEV--IEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLS 264
           G ++++D G+ S EV  ++K   ++     + GV   + K      G+ V     LP ++
Sbjct: 119 GAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVL--KNKKGVNVPGVKVN----LPGIT 172
Query: 265 KKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFE 324
           +KD  DI FGI +G+DFIA SFV  A  V  +++ +    +  I+++AKIEN E +   +
Sbjct: 173 EKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANID 232
Query: 325 EIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPT 384
           EI+EA+DG+MVARGDLGV+IP E++P +Q+++I     L KPVI A+Q+L+SM   P PT
Sbjct: 233 EILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPT 292
Query: 385 RAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQ 444
           RAE +DV+ A+    DA+MLSGE+A G +  +AV  +   + R E      +  S    +
Sbjct: 293 RAEASDVANAIFDGTDAVMLSGETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQRTKE 352
Query: 445 RQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDD 504
            Q   ++ D I + + + A+    NL V AI   T  G    ++++ RP  PI A T+++
Sbjct: 353 SQ--TTITDAIGQSVAHTAL----NLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAVTSNE 406
Query: 505 STRMALNLQWGVI---PVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHV 561
           +    L L WGV       VN +D+M   +   +D     G+VK+GD V++   +     
Sbjct: 407 AVSRRLALVWGVYTKEAPHVNTTDEM---LDVAVDAAVRSGLVKHGDLVVITAGVPVGET 463
Query: 562 TSTAFQSIQV 571
            ST    + V
Sbjct: 464 GSTNLMKVHV 473
>pdb|1PKY|A Chain A, Pyruvate Kinase From E. Coli In The T-State Length = 470 Back     alignment and structure
>pdb|1E0U|A Chain A, Structure R271l Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|1E0T|A Chain A, R292d Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|3T05|A Chain A, Crystal Structure Of S. Aureus Pyruvate Kinase Length = 606 Back     alignment and structure
>pdb|1ZJH|A Chain A, Structure Of Human Muscle Pyruvate Kinase (Pkm2) Length = 548 Back     alignment and structure
>pdb|3G2G|A Chain A, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2 Length = 533 Back     alignment and structure
>pdb|1PKM|A Chain A, The Refined Three-Dimensional Structure Of Cat Muscle (M1) Pyruvate Kinase, At A Resolution Of 2.6 Angstroms Length = 530 Back     alignment and structure
>pdb|3GQY|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 550 Back     alignment and structure
>pdb|1T5A|A Chain A, Human Pyruvate Kinase M2 Length = 567 Back     alignment and structure
>pdb|3SRD|A Chain A, Human M2 Pyruvate Kinase In Complex With Fructose 1-6 Bisphosphate And Oxalate. Length = 551 Back     alignment and structure
>pdb|4G1N|A Chain A, Pkm2 In Complex With An Activator Length = 518 Back     alignment and structure
>pdb|3BJF|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 518 Back     alignment and structure
>pdb|3BJT|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 530 Back     alignment and structure
>pdb|3U2Z|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 533 Back     alignment and structure
>pdb|4B2D|D Chain D, Human Pkm2 With L-serine And Fbp Bound Length = 548 Back     alignment and structure
>pdb|3SRF|C Chain C, Human M1 Pyruvate Kinase Length = 551 Back     alignment and structure
>pdb|3N25|A Chain A, The Structure Of Muscle Pyruvate Kinase In Complex With Proline, Pyruvate, And Mn2+ Length = 531 Back     alignment and structure
>pdb|1F3W|A Chain A, Recombinant Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|1AQF|A Chain A, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L- Phospholactate Length = 530 Back     alignment and structure
>pdb|2G50|A Chain A, The Location Of The Allosteric Amino Acid Binding Site Of Muscle Pyruvate Kinase. Length = 530 Back     alignment and structure
>pdb|2VGG|A Chain A, Human Erythrocyte Pyruvate Kinase: R479h Mutant Length = 528 Back     alignment and structure
>pdb|1F3X|A Chain A, S402p Mutant Of Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|1PKN|A Chain A, Structure Of Rabbit Muscle Pyruvate Kinase Complexed With Mn2+, K+, And Pyruvate Length = 530 Back     alignment and structure
>pdb|4IP7|A Chain A, Structure Of The S12d Variant Of Human Liver Pyruvate Kinase In Complex With Citrate And Fbp. Length = 543 Back     alignment and structure
>pdb|2VGB|A Chain A, Human Erythrocyte Pyruvate Kinase Length = 528 Back     alignment and structure
>pdb|2VGF|A Chain A, Human Erythrocyte Pyruvate Kinase: T384m Mutant Length = 528 Back     alignment and structure
>pdb|4IMA|A Chain A, The Structure Of C436m-hlpyk In Complex With Citrate/mn/atp/fru-1,6-bp Length = 543 Back     alignment and structure
>pdb|2VGI|A Chain A, Human Erythrocyte Pyruvate Kinase: R486w Mutant Length = 528 Back     alignment and structure
>pdb|3PP7|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase In Complex With The Drug Suramin, An Inhibitor Of Glycolysis. Length = 498 Back     alignment and structure
>pdb|1PKL|A Chain A, The Structure Of Leishmania Pyruvate Kinase Length = 499 Back     alignment and structure
>pdb|3E0V|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania Mexicana In Complex With Sulphate Ions Length = 539 Back     alignment and structure
>pdb|3KHD|A Chain A, Crystal Structure Of Pff1300w. Length = 520 Back     alignment and structure
>pdb|3QV9|A Chain A, Crystal Structure Of Trypanosoma Cruzi Pyruvate Kinase(Tcpyk)in Complex With Ponceau S. Length = 499 Back     alignment and structure
>pdb|3EOE|A Chain A, Crystal Structure Of Pyruvate Kinase From Toxoplasma Gondii, 55.M00007 Length = 511 Back     alignment and structure
>pdb|4DRS|A Chain A, Crystal Structure Of Cryptosporidium Parvum Pyruvate Kinase Length = 526 Back     alignment and structure
>pdb|3MA8|A Chain A, Crystal Structure Of Cgd1_2040, A Pyruvate Kinase From Cryptosporidium Parvum Length = 534 Back     alignment and structure
>pdb|1A3W|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed With Fbp, Pg, Mn2+ And K+ Length = 500 Back     alignment and structure
>pdb|3QTG|A Chain A, Crystal Structure Of Pyruvate Kinase From Pyrobaculum Aerophilum Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query575
1e0t_A470 Pyruvate kinase, PK; phosphotransferase, glycolysi 1e-145
3gg8_A511 Pyruvate kinase; malaria, genomics, proteomics, gl 1e-141
1a3w_A500 Pyruvate kinase; allosteric regulation, tranferase 1e-140
3khd_A520 Pyruvate kinase; malaria, structural genomics, str 1e-139
3ma8_A534 Pyruvate kinase; parasitology, pyruvate kiase, gly 1e-138
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 1e-138
3hqn_D499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 1e-138
3gr4_A550 Pyruvate kinase isozymes M1/M2; activator, acetyla 1e-138
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 1e-137
3qtg_A461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 1e-127
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Length = 470 Back     alignment and structure
 Score =  427 bits (1100), Expect = e-145
 Identities = 157/476 (32%), Positives = 243/476 (51%), Gaps = 34/476 (7%)

Query: 88  LRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFC 147
           ++KTK+VCTIGP   S E L K+   GMNV RLN  H     H   I+ ++ +  +    
Sbjct: 1   MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKT 60

Query: 148 ISVMIDTEGSQIHVVDHGEPNSVKVEE-DSIWLFTAIKFEGSRPFTVKANYAGFSEGIEV 206
            ++++DT+G +I  +     N V ++   +    T     G+    V   Y GF+  + V
Sbjct: 61  AAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSE-MVAVTYEGFTTDLSV 119

Query: 207 GDELVIDGGMASFEVIEKVGNDLRCKCTDPGVF-------LPRAKLSFRRNGILVERNHG 259
           G+ +++D G+   EV    GN + CK  + G         LP   ++             
Sbjct: 120 GNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIA------------- 166

Query: 260 LPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLES 319
           LP L++KD  D+ FG  +GVDF+A SF+     V  +++++      +I +++KIEN E 
Sbjct: 167 LPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEG 226

Query: 320 LQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVE 379
           L  F+EI+EASDGIMVARGDLGV+IP+E++   Q+++I  C +  K VI A+ +L+SM++
Sbjct: 227 LNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIK 286

Query: 380 YPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMAS--SRMELWSREENR 437
            P PT AE  DV+ A+    DA+MLSGESA G +  +AVS+  MA+   R +        
Sbjct: 287 NPRPTDAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSI--MATICERTD-------- 336

Query: 438 QSALCGQRQLGESLHDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPI 497
           +          ++   RI E +C  AV+ A  L    I V T+ G  A  + +  P+  I
Sbjct: 337 RVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATI 396

Query: 498 FAFTNDDSTRMALNLQWGVIPVLVNLSDDMETNIAKTIDLIKMKGMVKYGDAVLVV 553
            A T ++ T   L L  GV+P LV      +       +L    G+   GD V++V
Sbjct: 397 LALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMV 452
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Length = 511 Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Length = 500 Back     alignment and structure
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Length = 520 Back     alignment and structure
>3ma8_A Pyruvate kinase; parasitology, pyruvate kiase, glycol kinase, magnesium, transferase, structural genomi structural genomics consortium; HET: CIT; 2.64A {Cryptosporidium parvum} Length = 534 Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Length = 587 Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Length = 499 Back     alignment and structure
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 1zjh_A 3g2g_A 1t5a_A* 3bjt_A 3bjf_A* 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* 1aqf_A* 1pkm_A 2g50_A* 1pkn_A 2vgb_A* 2vgf_A* 2vgg_A* ... Length = 550 Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* Length = 606 Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Length = 461 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query575
3gr4_A550 Pyruvate kinase isozymes M1/M2; activator, acetyla 100.0
4drs_A526 Pyruvate kinase; glycolysis, allosteric EN transfe 100.0
3khd_A520 Pyruvate kinase; malaria, structural genomics, str 100.0
3hqn_D499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 100.0
3gg8_A511 Pyruvate kinase; malaria, genomics, proteomics, gl 100.0
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 100.0
1e0t_A470 Pyruvate kinase, PK; phosphotransferase, glycolysi 100.0
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 100.0
3qtg_A461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 100.0
1a3w_A500 Pyruvate kinase; allosteric regulation, tranferase 100.0
1izc_A339 Macrophomate synthase intermolecular diels-aldera; 99.73
2vws_A267 YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escher 99.67
2v5j_A287 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; l 99.66
1dxe_A256 2-dehydro-3-deoxy-galactarate aldolase; class II a 99.61
3qz6_A261 HPCH/HPAI aldolase; structural genomics, PSI-biolo 99.6
1sgj_A284 Citrate lyase, beta subunit; trimer, TIM barrel, s 99.48
2xz9_A324 Phosphoenolpyruvate-protein kinase (PTS system EI 99.22
2ols_A794 Phosphoenolpyruvate synthase; MC structural genomi 99.01
3qll_A316 Citrate lyase; beta barrel; 2.45A {Yersinia pestis 98.96
1u5h_A273 CITE; TIM barrel, structural genomics, PSI, protei 98.93
2hwg_A575 Phosphoenolpyruvate-protein phosphotransferase; en 98.91
2wqd_A572 Phosphoenolpyruvate-protein phosphotransferase; ki 98.87
3qqw_A332 Putative citrate lyase; TIM beta/alpha-barrel, str 98.77
3r4i_A339 Citrate lyase; TIM beta/alpha-barrel, structural g 98.71
3oyz_A433 Malate synthase; TIM barrel, transferase; HET: ACO 98.44
1vbg_A876 Pyruvate,orthophosphate dikinase; transferase, mai 98.2
1kbl_A873 PPDK, pyruvate phosphate dikinase; transferase, ph 98.05
1h6z_A913 Pyruvate phosphate dikinase; transferase, tropical 97.02
3cuz_A532 MSA, malate synthase A; TIM barrel, cytoplasm, gly 96.98
3cux_A528 Malate synthase; TIM barrel, glyoxylate bypass, tr 96.76
1p7t_A731 MSG, malate synthase G; TIM barrel, glyoxylate cyc 96.68
1vp8_A201 Hypothetical protein AF0103; putative pyruvate kin 96.07
1t57_A206 Conserved protein MTH1675; structural genomics, FM 95.58
2x0s_A913 Pyruvate phosphate dikinase; transferase, tropical 95.33
3f4w_A211 Putative hexulose 6 phosphate synthase; humps, mal 94.35
4af0_A556 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 94.12
4fo4_A366 Inosine 5'-monophosphate dehydrogenase; structural 93.98
3ffs_A400 Inosine-5-monophosphate dehydrogenase; beta-alpha 93.64
1h1y_A228 D-ribulose-5-phosphate 3-epimerase; oxidative pent 93.6
3ovp_A228 Ribulose-phosphate 3-epimerase; iron binding, isom 92.91
4fxs_A496 Inosine-5'-monophosphate dehydrogenase; structural 92.8
3usb_A511 Inosine-5'-monophosphate dehydrogenase; structural 92.58
3inp_A246 D-ribulose-phosphate 3-epimerase; IDP02542, isomer 92.54
3khj_A361 Inosine-5-monophosphate dehydrogenase; enzyme-inhi 92.39
2z6i_A332 Trans-2-enoyl-ACP reductase II; fatty acid synthes 92.36
4avf_A490 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 92.02
3r2g_A361 Inosine 5'-monophosphate dehydrogenase; structural 91.67
3igs_A232 N-acetylmannosamine-6-phosphate 2-epimerase 2; ene 91.45
1y0e_A223 Putative N-acetylmannosamine-6-phosphate 2-epimer; 91.3
3ctl_A231 D-allulose-6-phosphate 3-epimerase; D-glucitol 6-p 90.99
2fli_A220 Ribulose-phosphate 3-epimerase; (beta/alpha)8-barr 90.98
1jcn_A514 Inosine monophosphate dehydrogenase I; IMPD, IMPDH 90.76
3ajx_A207 3-hexulose-6-phosphate synthase; HPS, OMPDC supraf 90.35
3bo9_A326 Putative nitroalkan dioxygenase; TM0800, structura 90.24
1ydn_A295 Hydroxymethylglutaryl-COA lyase; TIM-barrel protei 89.92
3bw2_A369 2-nitropropane dioxygenase; TIM barrel, oxidoreduc 89.44
1tqj_A230 Ribulose-phosphate 3-epimerase; beta-alpha barrel 89.17
2gjl_A328 Hypothetical protein PA1024; 2-nitropropane dioxyg 88.57
3odm_A560 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 88.37
3nvt_A385 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; 88.27
2c6q_A351 GMP reductase 2; TIM barrel, metal-binding, NADP, 88.08
3q58_A229 N-acetylmannosamine-6-phosphate 2-epimerase; TIM b 87.42
1jqo_A 970 Phosphoenolpyruvate carboxylase; beta barrel, carb 87.01
1gte_A1025 Dihydropyrimidine dehydrogenase; electron transfer 86.28
1geq_A248 Tryptophan synthase alpha-subunit; hyperthermophIl 86.02
2qjg_A273 Putative aldolase MJ0400; beta-alpha barrel, lyase 85.72
1vrd_A494 Inosine-5'-monophosphate dehydrogenase; TM1347, st 85.55
3cu2_A237 Ribulose-5-phosphate 3-epimerase; YP_718263.1, rib 85.37
2qjg_A273 Putative aldolase MJ0400; beta-alpha barrel, lyase 85.27
3ble_A337 Citramalate synthase from leptospira interrogans; 85.02
3qja_A272 IGPS, indole-3-glycerol phosphate synthase; struct 85.0
4g9p_A406 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 84.82
1yad_A221 Regulatory protein TENI; TIM barrel, transcription 84.57
3eeg_A325 2-isopropylmalate synthase; 11106D, beta barrel, P 84.38
1eep_A404 Inosine 5'-monophosphate dehydrogenase; alpha-beta 84.35
1ydo_A307 HMG-COA lyase; TIM-barrel protein, structural geno 84.24
1h1y_A228 D-ribulose-5-phosphate 3-epimerase; oxidative pent 84.18
1zco_A262 2-dehydro-3-deoxyphosphoheptonate aldolase; arabin 84.17
1me8_A503 Inosine-5'-monophosphate dehydrogenase; alpha beta 84.03
2ftp_A302 Hydroxymethylglutaryl-COA lyase; structural genomi 83.97
1ypf_A336 GMP reductase; GUAC, purines, pyrimidines, nucleos 83.6
3vnd_A267 TSA, tryptophan synthase alpha chain; psychrophili 83.59
1ka9_F252 Imidazole glycerol phosphtate synthase; riken stru 83.58
1jqn_A883 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 83.56
1rpx_A230 Protein (ribulose-phosphate 3-epimerase); chloropl 83.39
2cw6_A298 Hydroxymethylglutaryl-COA lyase, mitochondrial; HM 82.57
3nav_A271 Tryptophan synthase alpha chain; alpha subunit, st 82.3
3jr2_A218 Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulon 81.6
1f76_A336 Dihydroorotate dehydrogenase; monomer, alpha-beta- 81.46
1vhc_A224 Putative KHG/KDPG aldolase; structural genomics, u 81.44
1nvm_A345 HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered 81.27
1thf_D253 HISF protein; thermophIle, TIM-barrel, histidine b 81.0
1mxs_A225 KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate a 80.97
1zfj_A491 Inosine monophosphate dehydrogenase; IMPDH, CBS do 80.7
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ... Back     alignment and structure
Probab=100.00  E-value=9e-139  Score=1137.30  Aligned_cols=491  Identities=32%  Similarity=0.501  Sum_probs=459.0

Q ss_pred             ccccccccccccccchhhhhhcccCCCCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHh
Q 008172           62 QENKHGLSLGFDAVSEGELREKGFLGLRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLN  141 (575)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~  141 (575)
                      ...+|+|.|+|++.+         .++|+|||||||||+|+++|+|++|+++||||||||||||++|+|.++++++|+++
T Consensus        44 ~~l~~~~~l~~~~~~---------~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~  114 (550)
T 3gr4_A           44 TFLEHMCRLDIDSPP---------ITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTAT  114 (550)
T ss_dssp             SHHHHHHTCCTTSCC---------CSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHH
T ss_pred             cHHHHhhccCCCCCC---------ccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHH
Confidence            445999999999977         77899999999999999999999999999999999999999999999999999999


Q ss_pred             hh------cCCceEEEEeCCCCeEEEEecCCC--CceEEecCCEEEEEeecc--CCCCCcEEEecccccccccCCCCEEE
Q 008172          142 HE------KLFCISVMIDTEGSQIHVVDHGEP--NSVKVEEDSIWLFTAIKF--EGSRPFTVKANYAGFSEGIEVGDELV  211 (575)
Q Consensus       142 ~~------~~~~i~Il~Dl~GpkIRtG~~~~~--~~i~l~~G~~v~lt~~~~--~~~~~~~i~v~~~~l~~~v~~Gd~Il  211 (575)
                      ++      +|+|++||+||||||||||.+.++  .++.|++|++|+|++++.  ..++.+.+++||++|+++|++||+||
T Consensus       115 ~~~~~~~~~~~~vaIllDlkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~Il  194 (550)
T 3gr4_A          115 ESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIY  194 (550)
T ss_dssp             HTTTTCTTTCCCCEEEEECCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEE
T ss_pred             HhhccccccCceEEEEEeCCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEE
Confidence            88      899999999999999999999652  479999999999998763  23345789999999999999999999


Q ss_pred             EeCCeeEEEEEEEECCeEEEEEecCeEecCCcccccccCcccccccccCCCCCccCHHHHHHHHHcCCCEEEecCcCChh
Q 008172          212 IDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSFRRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDAD  291 (575)
Q Consensus       212 iDDG~i~l~V~~~~~~~i~~~V~~gG~l~s~K~vn~~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd~I~~SfV~sa~  291 (575)
                      +|||+|+|+|.++.++.+.|+|++||.|+++||||+      ||..+++|.|||||++||+|++++|+|||++||||+++
T Consensus       195 idDG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNl------Pg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr~a~  268 (550)
T 3gr4_A          195 VDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNL------PGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAS  268 (550)
T ss_dssp             ETTTTEEEEEEEECSSEEEEEEEECEEECSSCBEEC------TTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHH
T ss_pred             EeCCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeec------CCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHH
Confidence            999999999999999999999999999999999997      57889999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHHhcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEeh
Q 008172          292 SVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIVEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVAS  371 (575)
Q Consensus       292 dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaT  371 (575)
                      |++++|+++.+.| .++.||||||+++|++|+|||++++|||||||||||+|+|.+++|.+||+|+++|+++|||||+||
T Consensus       269 Dv~~~r~~L~~~g-~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~AT  347 (550)
T 3gr4_A          269 DVHEVRKVLGEKG-KNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICAT  347 (550)
T ss_dssp             HHHHHHHHHTTTT-TTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEES
T ss_pred             HHHHHHHHHHhcC-CCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence            9999999999887 689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccCcCCCCCHHHHHHHHHHHHHHHhhhhhhhhhHHhhhcccccCCCC
Q 008172          372 QLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRMELWSREENRQSALCGQRQLGESL  451 (575)
Q Consensus       372 q~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~  451 (575)
                      ||||||++||+|||||++||||||+||+||+|||||||.|+||+|||++|++||+++|+...+...+....   .. ...
T Consensus       348 QMLeSMi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~---~~-~~~  423 (550)
T 3gr4_A          348 QMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELR---RL-API  423 (550)
T ss_dssp             STTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHH---HH-SCC
T ss_pred             hhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhh---hc-cCC
Confidence            99999999999999999999999999999999999999999999999999999999998655443332221   11 122


Q ss_pred             CCchhhHHHHHHHHHHHhcCCcEEEEEcCChhHHHHHhccCCCCcEEEEcCcHHHHHHhcccCCcEEEEecCC------C
Q 008172          452 HDRIAEQICNCAVDMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDDSTRMALNLQWGVIPVLVNLS------D  525 (575)
Q Consensus       452 ~~~~~~~ia~~av~~a~~~~AkaIVVfT~SG~TAr~VSr~RP~~PIiAvT~~~~~aR~L~L~~GV~Pvl~~~~------~  525 (575)
                      +.+..+++|.+|+++|++++|++||+||.||+||+++|||||.+||||+|++++++|||+|+|||+|++++..      .
T Consensus       424 ~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~T~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~  503 (550)
T 3gr4_A          424 TSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAE  503 (550)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCSCCCSSHHH
T ss_pred             CCChHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHHhccCCeEEEEecccccccccC
Confidence            4567899999999999999999999999999999999999999999999999999999999999999999754      4


Q ss_pred             CHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCccccceEEEEEcC
Q 008172          526 DMETNIAKTIDLIKMKGMVKYGDAVLVVLDLTPAHVTSTAFQSIQVKTIV  575 (575)
Q Consensus       526 d~d~~i~~al~~~~~~g~~k~GD~VVvv~G~~~~~g~t~~~~~i~v~~v~  575 (575)
                      +.+++++.|++++++.|++++||.||+++|+|.++|+|   |++||++||
T Consensus       504 ~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g~G~T---N~lrv~~v~  550 (550)
T 3gr4_A          504 DVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFT---NTMRVVPVP  550 (550)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTCEEEEEEESSSSTTCE---EEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCEEEEEeCCCCCCCCC---eEEEEEEcC
Confidence            67899999999999999999999999999999998988   999999987
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A* Back     alignment and structure
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Back     alignment and structure
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A* Back     alignment and structure
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Back     alignment and structure
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5 Back     alignment and structure
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A Back     alignment and structure
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A Back     alignment and structure
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A Back     alignment and structure
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0 Back     alignment and structure
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5 Back     alignment and structure
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A* Back     alignment and structure
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} Back     alignment and structure
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis} Back     alignment and structure
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A Back     alignment and structure
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A Back     alignment and structure
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A Back     alignment and structure
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha} Back     alignment and structure
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans} Back     alignment and structure
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A Back     alignment and structure
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A* Back     alignment and structure
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A Back     alignment and structure
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A Back     alignment and structure
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A* Back     alignment and structure
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A Back     alignment and structure
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2 Back     alignment and structure
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2 Back     alignment and structure
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei} Back     alignment and structure
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0 Back     alignment and structure
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B* Back     alignment and structure
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A Back     alignment and structure
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum} Back     alignment and structure
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A Back     alignment and structure
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A Back     alignment and structure
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A* Back     alignment and structure
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp} Back     alignment and structure
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} Back     alignment and structure
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A* Back     alignment and structure
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp} Back     alignment and structure
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0 Back     alignment and structure
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5 Back     alignment and structure
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A* Back     alignment and structure
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2 Back     alignment and structure
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A* Back     alignment and structure
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri} Back     alignment and structure
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8} Back     alignment and structure
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} Back     alignment and structure
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A* Back     alignment and structure
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2 Back     alignment and structure
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A* Back     alignment and structure
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} Back     alignment and structure
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A* Back     alignment and structure
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A* Back     alignment and structure
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp} Back     alignment and structure
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A Back     alignment and structure
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A Back     alignment and structure
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1 Back     alignment and structure
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus} Back     alignment and structure
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A Back     alignment and structure
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A* Back     alignment and structure
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A* Back     alignment and structure
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A* Back     alignment and structure
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A* Back     alignment and structure
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1 Back     alignment and structure
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp} Back     alignment and structure
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A Back     alignment and structure
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus} Back     alignment and structure
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A* Back     alignment and structure
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A* Back     alignment and structure
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina} Back     alignment and structure
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1 Back     alignment and structure
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A Back     alignment and structure
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2 Back     alignment and structure
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A* Back     alignment and structure
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4 Back     alignment and structure
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A* Back     alignment and structure
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1 Back     alignment and structure
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1 Back     alignment and structure
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5 Back     alignment and structure
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A Back     alignment and structure
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1 Back     alignment and structure
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 575
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 9e-45
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 7e-18
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 2e-42
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 3e-19
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 3e-40
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 6e-21
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 5e-39
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 2e-18
d1e0ta3117 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal d 1e-21
d1a3xa3134 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal d 2e-20
d2vgba3134 c.49.1.1 (A:440-573) Pyruvate kinase, C-terminal d 4e-19
d1pkla3141 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal d 6e-19
d2g50a3135 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal d 7e-16
d2g50a1102 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit 0.001
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Leishmania mexicana [TaxId: 5665]

 Score =  157 bits (397), Expect = 9e-45
 Identities = 74/163 (45%), Positives = 104/163 (63%), Gaps = 1/163 (0%)

Query: 267 DWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEI 326
           D  D++FG+ +GVD I  SF+  A+ V  ++K + G   R I ++ KIEN + +Q  + I
Sbjct: 94  DRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKAL-GPKGRDIMIICKIENHQGVQNIDSI 152

Query: 327 VEASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRA 386
           +E SDGIMVARGDLGV+IP E++   Q+I+I  C    KPVI A+Q+LESM   P PTRA
Sbjct: 153 IEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRA 212

Query: 387 EVADVSEAVRQYADALMLSGESAIGPFGQKAVSVLQMASSRME 429
           EV+DV+ AV   AD +MLSGE+A G +  + V  +       +
Sbjct: 213 EVSDVANAVFNGADCVMLSGETAKGKYPNEVVQYMARICLEAQ 255
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 117 Back     information, alignment and structure
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 134 Back     information, alignment and structure
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 141 Back     information, alignment and structure
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 135 Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 102 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query575
d1e0ta2246 Pyruvate kinase, N-terminal domain {Escherichia co 100.0
d1pkla2258 Pyruvate kinase, N-terminal domain {Leishmania mex 100.0
d1a3xa2265 Pyruvate kinase, N-terminal domain {Baker's yeast 100.0
d2g50a2282 Pyruvate kinase, N-terminal domain {Rabbit (Orycto 100.0
d1e0ta3117 Pyruvate kinase, C-terminal domain {Escherichia co 99.97
d2g50a3135 Pyruvate kinase, C-terminal domain {Rabbit (Orycto 99.97
d2vgba3134 Pyruvate kinase, C-terminal domain {Human (Homo sa 99.97
d1a3xa3134 Pyruvate kinase, C-terminal domain {Baker's yeast 99.97
d1pkla3141 Pyruvate kinase, C-terminal domain {Leishmania mex 99.96
d1e0ta198 Pyruvate kinase (PK) {Escherichia coli [TaxId: 562 99.84
d1a3xa1101 Pyruvate kinase (PK) {Baker's yeast (Saccharomyces 99.81
d2g50a1102 Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculu 99.8
d2vgba1102 Pyruvate kinase (PK) {Human (Homo sapiens) [TaxId: 99.8
d1pkla199 Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 99.78
d1dxea_253 2-dehydro-3-deoxy-galactarate aldolase {Escherichi 99.68
d1izca_299 Macrophomate synthase {Macrophoma commelinae [TaxI 99.62
d1sgja_231 Citrate lyase, beta subunit {Deinococcus radiodura 98.38
d1u5ha_223 Citrate lyase, beta subunit {Mycobacterium tubercu 98.02
d1vbga1356 Pyruvate phosphate dikinase, C-terminal domain {Ma 97.08
d1kbla1364 Pyruvate phosphate dikinase, C-terminal domain {Cl 97.03
d1h6za1366 Pyruvate phosphate dikinase, C-terminal domain {Tr 95.75
d1vrda1330 Inosine monophosphate dehydrogenase (IMPDH) {Therm 94.74
d1zfja1365 Inosine monophosphate dehydrogenase (IMPDH) {Strep 94.67
d1eepa_388 Inosine monophosphate dehydrogenase (IMPDH) {Lyme 94.09
d1jr1a1378 Inosine monophosphate dehydrogenase (IMPDH) {Chine 93.97
d1t57a_186 Hypothetical protein MTH1675 {Methanobacterium the 93.95
d2cu0a1368 Inosine monophosphate dehydrogenase (IMPDH) {Pyroc 92.68
d1y0ea_222 Putative N-acetylmannosamine-6-phosphate 2-epimera 92.43
d1vp8a_190 Hypothetical protein AF0103 {Archaeoglobus fulgidu 92.26
d1gtea2312 Dihydropyrimidine dehydrogenase, domain 4 {Pig (Su 83.48
d1geqa_248 Trp synthase alpha-subunit {Archaeon Pyrococcus fu 83.3
d1yxya1230 Putative N-acetylmannosamine-6-phosphate 2-epimera 83.02
d1n7ka_234 Deoxyribose-phosphate aldolase DeoC {Archaeon Aero 82.75
d1qopa_267 Trp synthase alpha-subunit {Salmonella typhimurium 82.6
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-81  Score=626.57  Aligned_cols=242  Identities=41%  Similarity=0.654  Sum_probs=220.7

Q ss_pred             CCCceEEEecCCCCCCHHHHHHHHHcCCcEEEeeCCCCCHHHHHHHHHHHHHHhhhcCCceEEEEeCCCCeEEEEecCCC
Q 008172           88 LRKTKMVCTIGPACCSMEDLEKLAMGGMNVARLNMCHNTREWHLDVIRKIKQLNHEKLFCISVMIDTEGSQIHVVDHGEP  167 (575)
Q Consensus        88 ~r~tkIi~TiGPas~~~e~l~~li~~G~~v~RlN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkIRtG~~~~~  167 (575)
                      ||||||||||||+|+++++|++|+++||||||||||||++++|.++++++|+++++.|++++|++||+||+         
T Consensus         1 mrkTKIIaTiGPas~~~~~l~~li~aGvdv~RlN~SHg~~~~~~~~i~~ir~~~~~~~~~~~I~~Dl~gp~---------   71 (246)
T d1e0ta2           1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPA---------   71 (246)
T ss_dssp             CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCS---------
T ss_pred             CCCCeEEEeeCCCcCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCCCcccccccccc---------
Confidence            78999999999999999999999999999999999999999999999999999999999999999999853         


Q ss_pred             CceEEecCCEEEEEeeccCCCCCcEEEecccccccccCCCCEEEEeCCeeEEEEEEEECCeEEEEEecCeEecCCccccc
Q 008172          168 NSVKVEEDSIWLFTAIKFEGSRPFTVKANYAGFSEGIEVGDELVIDGGMASFEVIEKVGNDLRCKCTDPGVFLPRAKLSF  247 (575)
Q Consensus       168 ~~i~l~~G~~v~lt~~~~~~~~~~~i~v~~~~l~~~v~~Gd~IliDDG~i~l~V~~~~~~~i~~~V~~gG~l~s~K~vn~  247 (575)
                                                                                                      
T Consensus        72 --------------------------------------------------------------------------------   71 (246)
T d1e0ta2          72 --------------------------------------------------------------------------------   71 (246)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCcccccccccCCCCCccCHHHHHHHHHcCCCEEEecCcCChhhHHHHHHHHhccCCCCceEEeeecCHHHHhcHHHHH
Q 008172          248 RRNGILVERNHGLPTLSKKDWDDIEFGIAEGVDFIAMSFVCDADSVRHLKKYVSGKSSRSIKVLAKIENLESLQKFEEIV  327 (575)
Q Consensus       248 ~r~g~~~~~~~~lp~lsekD~~di~~al~~gvd~I~~SfV~sa~dv~~ir~~l~~~~~~~i~IIaKIEt~~av~nldeI~  327 (575)
                                     ||+||.++++||+++|+|||++||||+++|+.++|+++.+.+..+++||||||+++|++|||+|+
T Consensus        72 ---------------ltekD~~~i~~a~~~~vD~ialSFVr~~~Dv~~~r~~l~~~~~~~~~iiaKIE~~~al~nldeIi  136 (246)
T d1e0ta2          72 ---------------LAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEIL  136 (246)
T ss_dssp             ---------------SCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHH
T ss_pred             ---------------cccCcchhhhHHHHcCCCEEEEcCCCCHHHHHHHHHHHHHhCCCCceEEEEecchhhhhchHHHH
Confidence                           48999999999999999999999999999999999999988767899999999999999999999


Q ss_pred             hcCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCCEEEehhhHHhhhcCCCCChhhHhhHHHHHHcccceEEeccC
Q 008172          328 EASDGIMVARGDLGVDIPLEQIPTVQEIIIHVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGE  407 (575)
Q Consensus       328 ~~sDgImIaRGDLg~e~~~e~v~~~Qk~Ii~~c~~~gKPvivaTq~LeSM~~~p~PtrAEv~Dv~nav~~G~D~vmLs~E  407 (575)
                      +++|||||||||||+|+|++++|.+||+|++.|+++|||||+||||||||+++|.|||||++||+|||+||+||+|||+|
T Consensus       137 ~~sDgImIaRGDLg~ei~~e~vp~~Qk~ii~~~~~~~kpvi~ATq~LeSM~~~p~PTRAEv~Dv~nav~dG~D~vmLs~E  216 (246)
T d1e0ta2         137 EASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGE  216 (246)
T ss_dssp             HHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             hhcceEEEEccchhhhCCHHHHHHHHHHHHHHHHHhCCCEEEehhhhhhhhcCCCCchHHHHHHHHHHHhCCcEEEEccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHhhhhh
Q 008172          408 SAIGPFGQKAVSVLQMASSRMELWSR  433 (575)
Q Consensus       408 Ta~G~yPveaV~~m~~I~~~aE~~~~  433 (575)
                      ||+|+||++||++|++|++++|++++
T Consensus       217 Ta~G~~P~~~v~~l~~i~~~~E~~~~  242 (246)
T d1e0ta2         217 SAKGKYPLEAVSIMATICERTDRVMN  242 (246)
T ss_dssp             ------CHHHHHHHHHHHHHHHTTCC
T ss_pred             cccCCCHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999998654
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]} Back     information, alignment and structure
>d1sgja_ c.1.12.5 (A:) Citrate lyase, beta subunit {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1u5ha_ c.1.12.5 (A:) Citrate lyase, beta subunit {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase, C-terminal domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1kbla1 c.1.12.2 (A:510-873) Pyruvate phosphate dikinase, C-terminal domain {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1t57a_ c.49.1.2 (A:) Hypothetical protein MTH1675 {Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1geqa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1n7ka_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure