Citrus Sinensis ID: 008230


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570---
MGSCVSTPASRVKIRRRRHHRSSKCHRKIINSGPDGTNKLNNDPGSRVTDFAVSEYVHLDFEKGATTTCRRSEVTNSAFHLTQMQWHLSQVDANVICQEDAWFDSVSILDSDSDDDFISVHGDGFPVAGNPIGNISSSHMLQYESSSCFMDGKGKYEEYHESYVKIDGGKPEKYSSKDEFKGSNKSGVISTQGYDFSCSGKADEICNRRKKLLEHSYGSFKGFKDEKCNSEGKPLKLGLHRLNPSVSFNDKILSSAALGPQPQRKKSAVFRLSFKRRSCDGEETTEQCTSKKFLYRPKAGFVIPCSTGEKLTPGCWAEIPPSTFKLRGETYFKDKRKSPAPEHSPFTPIGVDLFNCPRKINHIAQHLELPYLKADGKVPPLLIVNIQLPAYPAAMFLGDSDGEGMSLVLYFKVSENFEKVISPQYQESIKKLVEDEMEKVRGFAKDSIVPFRERLKIMAGLVNPEDLNMSSAEKKLVNAYNEKPVLSRPQHEFYKGPNYFEIDLDIHRFSYISRKGFEAFRERLANGILDVGLTIQAQKPEELPEQALCCLRLNKIDFVDYGQIPTLMTIGDD
ccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccEEccccccccccccccccccccccccccccEEEcccccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccEEEEEEEccccccccccccccccccEEEEEEEEccHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccccccccHHHHHHHHHccccccccccccccEEccccEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEEEEcccccccccEEcEEEEcccccccccccccccccccc
cccccccccccccccccEccccccEcccccccccccccccccccccccccccccEEEEEEcccccccccccccccccEEEEEEEEccccccccccccHHHHHEccHHEEcccccccccccccccccccccccccccccccccccccccccccccccHHHcccEEEEcccccccccccccccccccccccccccccEcccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEcccccccccccccHHHHcccccccccccccccccccccccccccccEEEEccccccccccccccccccccEEEEEEEcccccHHHHHcccccccccccccccEEEEEEEEccccccHHcccccccccEEEEEEEEcccccccccccccHHHHHHHHccccHHHccccccccHcHHHHHHHHHHccccccccccHHHHHHHHHccccccEccccEEEEccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHEEEHHEEEEcccHHHccHHEEEEEEEcccEcccccccccEEEcccc
mgscvstpasrvkirrrrhhrsskchrkiinsgpdgtnklnndpgsrvtdfAVSEYVhldfekgatttcrrsevtnsAFHLTQMQWHLSQVDANvicqedawfdsvsildsdsdddfisvhgdgfpvagnpignissshmlqyessscfmdgkgkyeeYHESYVkidggkpekysskdefkgsnksgvistqgydfscsgkaDEICNRRKKLLEhsygsfkgfkdekcnsegkplklglhrlnpsvsfndkilssaalgpqpqrkksAVFRLSfkrrscdgeetteqctskkflyrpkagfvipcstgekltpgcwaeippstfklrgetyfkdkrkspapehspftpigvdlfncprkINHIAQhlelpylkadgkvppllivniqlpaypaamflgdsdgegMSLVLYFKVSENFEKVISPQYQESIKKLVEDEMEKVRGFAKDSIVPFRERLKIMAglvnpedlnmSSAEKKLVNaynekpvlsrpqhefykgpnyfeidldihRFSYISRKGFEAFRERLANGILDVgltiqaqkpeelpeQALCCLRlnkidfvdygqiptlmtigdd
mgscvstpasrvkirrrrhhrsskchrkiinsgpdgtnklnndPGSRVTDFAVSEYVHLDfekgatttcrrSEVTNSAFHLTQMQWHLSQVDANVICQEDAWFDSVSILDSDSDDDFISVHGDGFPVAGNPIGNISSSHMLQYESSSCFMDGKGKYEEYHESYVkidggkpekysskdefkgsnksgvistqgydfscsgKADEICNRRKKLLEHSygsfkgfkdekCNSEGKPLKLGLHRLNPSVSFNDKILssaalgpqpqrkkSAVFRLSfkrrscdgeetteqctskkflyrpkAGFVIPCSTGEKLTPGCWAEIPPSTFKLRGETYFKDKrkspapehspftpIGVDLFNCPRKINHIAQHLELPYLKADGKVPPLLIVNIQLPAYPAAMFLGDSDGEGMSLVLYFKVSENFEKVISPQYQESIKKLVEDEMEKVRgfakdsivpfrERLKIMAGLVNPEDLNMSSAEKKLVNAYnekpvlsrpqhefykGPNYFEIDLDIHRFSYISRKGFEAFRERLANGILDVGLTIQAQKPEELPEQALCCLRLNKIDFVDYGQIPTLMTIGDD
MGSCVSTPAsrvkirrrrhhrsskchrkIINSGPDGTNKLNNDPGSRVTDFAVSEYVHLDFEKGATTTCRRSEVTNSAFHLTQMQWHLSQVDANVICQEDAWfdsvsildsdsdddfisvHGDGFPVAGNPIGNISSSHMLQYESSSCFMDGKGKYEEYHESYVKIDGGKPEKYSSKDEFKGSNKSGVISTQGYDFSCSGKADEICNRRKKLLEHSYGSFKGFKDEKCNSEGKPLKLGLHRLNPSVSFNDKILSSAALGPQPQRKKSAVFRLSFKRRSCDGEETTEQCTSKKFLYRPKAGFVIPCSTGEKLTPGCWAEIPPSTFKLRGETYFKDKRKSPAPEHSPFTPIGVDLFNCPRKINHIAQHLELPYLKADGKVPPLLIVNIQLPAYPAAMFLGDSDGEGMSLVLYFKVSENFEKVISPQYQESIKKLVEDEMEKVRGFAKDSIVPFRERLKIMAGLVNPEDLNMSSAEKKLVNAYNEKPVLSRPQHEFYKGPNYFEIDLDIHRFSYISRKGFEAFRERLANGILDVGLTIQAQKPEELPEQALCCLRLNKIDFVDYGQIPTLMTIGDD
***********************************************VTDFAVSEYVHLDFEKGATTTCRRSEVTNSAFHLTQMQWHLSQVDANVICQEDAWFDSVSILDSDSDDDFISVHGDGFPVAGNPIGNISS*HMLQYE*SSCFMDGKGKYEEYHESYV***************************QGYDFSCSGKADEICNRRKKLLEHSYGSFKG*****************************************************************CTSKKFLYRPKAGFVIPCSTGEKLTPGCWAEIPPSTFKLRGETYF*************FTPIGVDLFNCPRKINHIAQHLELPYLKADGKVPPLLIVNIQLPAYPAAMFLGDSDGEGMSLVLYFKVSENFEKVISPQYQESIKKLVEDEMEKVRGFAKDSIVPFRERLKIMAGLVN*************VNAY****VLSRPQHEFYKGPNYFEIDLDIHRFSYISRKGFEAFRERLANGILDVGLTIQAQKPEELPEQALCCLRLNKIDFVDYGQIPTLMTI***
***C**************************************************EYVHL******************AFHLTQMQWHLSQVDANVICQEDAWFDSVSILDSDSDDDFISVHGDGFP***************************************************************************************************************************************************************************KAGFVIP**********CWAEIPPSTFKLRGETYFKDKRKSPAPEHSPFTPIGVDLFNCPRKINHIAQ**********GKVPPLLIVNIQLPAYPAAMFLGDSDGEGMSLVLYFKVSENFE*********SIKKLVEDEMEKVRGFAKDSIVPFRERLKIMAGLVNPEDLNMSSAEKKLVNAYNEKPVLSRPQHEFYKGPNYFEIDLDIHRFSYISRKGFEAFRERLANGILDVGLTIQAQKPEELPEQALCCLRLNKIDFVDYGQIP*LM*****
*************************HRKIINSGPDGTNKLNNDPGSRVTDFAVSEYVHLDFEKGATTTCRRSEVTNSAFHLTQMQWHLSQVDANVICQEDAWFDSVSILDSDSDDDFISVHGDGFPVAGNPIGNISSSHMLQYESSSCFMDGKGKYEEYHESYVKIDGGKPEKYSSKDEFKGSNKSGVISTQGYDFSCSGKADEICNRRKKLLEHSYGSFKGFKDEKCNSEGKPLKLGLHRLNPSVSFNDKILSSAAL**********VFRLSFKRR***********TSKKFLYRPKAGFVIPCSTGEKLTPGCWAEIPPSTFKLRGETYFK**********SPFTPIGVDLFNCPRKINHIAQHLELPYLKADGKVPPLLIVNIQLPAYPAAMFLGDSDGEGMSLVLYFKVSENFEKVISPQYQESIKKLVEDEMEKVRGFAKDSIVPFRERLKIMAGLVNPEDLNMSSAEKKLVNAYNEKPVLSRPQHEFYKGPNYFEIDLDIHRFSYISRKGFEAFRERLANGILDVGLTIQAQKPEELPEQALCCLRLNKIDFVDYGQIPTLMTIGDD
**********************************************RVTDFAVSEYVHLDFEKGATTTC*R***TNSAFHLTQMQWHLSQVDANVICQEDAWFDSVSILDSDSDDDFISVHGDGFPVA*****************SSCFMDGKGKYEEYHESYVKIDGG*********************************************HS*GSFKGFKDEKCNS******LGL***************************SAVFRLSFKRRSCDGEETTEQCTSKKFLYRPKAGFVIPCSTGEKLTPGCWAEIPPSTFKLRGETYFKDKRKSPAPEHSPFTPIGVDLFNCPRKINHIAQHLELPYLKADGKVPPLLIVNIQLPAYPAAMFLGDSDGEGMSLVLYFKVSENFEKVISPQYQESIKKLVEDEMEKVRGFAKDSIVPFRERLKIMAGLVNPEDLNMSSAEKKLVNAYNEKPVLSRPQHEFYKGPNYFEIDLDIHRFSYISRKGFEAFRERLANGILDVGLTIQAQKPEELPEQALCCLRLNKIDFVDYGQIPTLMT****
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGSCVSTPASRVKIRRRRHHRSSKCHRKIINSGPDGTNKLNNDPGSRVTDFAVSEYVHLDFEKGATTTCRRSEVTNSAFHLTQMQWHLSQVDANVICQEDAWFDSVSILDSDSDDDFISVHGDGFPVAGNPIGNISSSHMLQYESSSCFMDGKGKYEEYHESYVKIDGGKPEKYSSKDEFKGSNKSGVISTQGYDFSCSGKADEICNRRKKLLEHSYGSFKGFKDEKCNSEGKPLKLGLHRLNPSVSFNDKILSSAALGPQPQRKKSAVFRLSFKRRSCDGEETTEQCTSKKFLYRPKAGFVIPCSTGEKLTPGCWAEIPPSTFKLRGETYFKDKRKSPAPEHSPFTPIGVDLFNCPRKINHIAQHLELPYLKADGKVPPLLIVNIQLPAYPAAMFLGDSDGEGMSLVLYFKVSENFEKVISPQYQESIKKLVEDEMEKVRGFAKDSIVPFRERLKIMAGLVNPEDLNMSSAEKKLVNAYNEKPVLSRPQHEFYKGPNYFEIDLDIHRFSYISRKGFEAFRERLANGILDVGLTIQAQKPEELPEQALCCLRLNKIDFVDYGQIPTLMTIGDD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query573
225452909564 PREDICTED: uncharacterized protein LOC10 0.973 0.989 0.660 0.0
296082961558 unnamed protein product [Vitis vinifera] 0.963 0.989 0.657 0.0
255578310545 conserved hypothetical protein [Ricinus 0.947 0.996 0.683 0.0
356526457561 PREDICTED: uncharacterized protein LOC10 0.949 0.969 0.636 0.0
449438032557 PREDICTED: uncharacterized protein LOC10 0.923 0.949 0.664 0.0
357502053552 hypothetical protein MTR_7g011790 [Medic 0.942 0.978 0.613 0.0
224141033466 predicted protein [Populus trichocarpa] 0.808 0.993 0.731 0.0
18406090513 uncharacterized protein [Arabidopsis tha 0.792 0.884 0.682 0.0
15450962513 Unknown protein [Arabidopsis thaliana] g 0.792 0.884 0.682 0.0
297815224513 predicted protein [Arabidopsis lyrata su 0.792 0.884 0.672 0.0
>gi|225452909|ref|XP_002278808.1| PREDICTED: uncharacterized protein LOC100245770 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/578 (66%), Positives = 453/578 (78%), Gaps = 20/578 (3%)

Query: 1   MGSCVSTPASRVKIRRRRHHRSSKCHRKIINSGPDGTNKLNNDPGSRVTDFAVSEYVHLD 60
           MG CVSTPA   K RR+  HR  K H KI  S  DG  K N+D G  VTDFAVSE+VH+D
Sbjct: 1   MGGCVSTPARGPKPRRKYRHRFGKRHGKISTSITDGIKKRNSDAGPHVTDFAVSEFVHMD 60

Query: 61  FEKGATTTCRRSEVTNSAFHLTQMQWHLSQVDANVICQEDAWFDSVSILDSDSDDDFISV 120
           F+KGATTTCRRSEV+NS FHLTQ+QW+ S +DANVIC E+AWFD+VSILDS+SDD+F SV
Sbjct: 61  FDKGATTTCRRSEVSNSTFHLTQLQWYHSPIDANVICPEEAWFDTVSILDSESDDEFTSV 120

Query: 121 HGDGFPVAGNPIGNISSSHMLQYESSSCFMDGKGKYEEYHESYVKIDGGKPEKYSSKDEF 180
           HGD  P+ GN IGN SS  +LQYE+SSC +D  GKYEEYHE  +K DGG  EK+ SKDE+
Sbjct: 121 HGDFLPLVGNAIGNGSSGQVLQYETSSCIVDNGGKYEEYHERILKADGGISEKFLSKDEY 180

Query: 181 KGSNKSGVISTQGYDFSCSGKADEICNRRKKLLEHSYGSF-----KGFKDEKCNSEGKPL 235
           K ++   VI               I  ++KK+L+HSY SF     +  +D    +    L
Sbjct: 181 KEASGFSVI---------------ISTKKKKMLDHSYESFNSSLKEARRDSVDRTLDNTL 225

Query: 236 KLGLHRLNPSVSFNDKILSSAALGPQPQRKKSAVFRLSFKRRSCDGEETTEQCTSKKFLY 295
             GL  L P+VSFNDKI +   + PQ QR+ S V R SFKR+SCDGEE TE C SK+FLY
Sbjct: 226 MPGLPLLVPNVSFNDKIFNQPCVSPQSQRRTSTVIRFSFKRKSCDGEEKTEYCASKRFLY 285

Query: 296 RPKAGFVIPCSTGEKLTPGCWAEIPPSTFKLRGETYFKDKRKSPAPEHSPFTPIGVDLFN 355
           RP++G  IP  +GEK +PGCW E+ PS FKLRG TYFKDKRK+PA  HSP+ P+GVDLF 
Sbjct: 286 RPRSGLRIPFCSGEKQSPGCWCEVSPSVFKLRGVTYFKDKRKAPASSHSPYIPVGVDLFM 345

Query: 356 CPRKINHIAQHLELPYLKADGKVPPLLIVNIQLPAYPAAMFLGDSDGEGMSLVLYFKVSE 415
           C RKINHIAQHLELP +KA+GKVP LLIVNIQLP YPAAMF GDSDGEGMSL+LYFKVSE
Sbjct: 346 CSRKINHIAQHLELPNVKAEGKVPSLLIVNIQLPTYPAAMFSGDSDGEGMSLILYFKVSE 405

Query: 416 NFEKVISPQYQESIKKLVEDEMEKVRGFAKDSIVPFRERLKIMAGLVNPEDLNMSSAEKK 475
            F+K ISP +Q+SIK+L+EDEMEKV+GFAK+S+VPFRERLKIMAG+VNPE+L+++S EKK
Sbjct: 406 TFDKDISPHFQDSIKRLIEDEMEKVKGFAKESMVPFRERLKIMAGVVNPEELHLNSTEKK 465

Query: 476 LVNAYNEKPVLSRPQHEFYKGPNYFEIDLDIHRFSYISRKGFEAFRERLANGILDVGLTI 535
           L+ AYNEKPVLSRPQH FY+GPNYFEIDLDIHRFS+I+RKG EAFRERL NGI+D+GLTI
Sbjct: 466 LLQAYNEKPVLSRPQHNFYRGPNYFEIDLDIHRFSFIARKGLEAFRERLKNGIVDLGLTI 525

Query: 536 QAQKPEELPEQALCCLRLNKIDFVDYGQIPTLMTIGDD 573
           QAQKPEELPEQ LCC+RLNKIDF+D+GQIPT++T+ DD
Sbjct: 526 QAQKPEELPEQMLCCVRLNKIDFIDHGQIPTIVTLDDD 563




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082961|emb|CBI22262.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255578310|ref|XP_002530022.1| conserved hypothetical protein [Ricinus communis] gi|223530501|gb|EEF32384.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356526457|ref|XP_003531834.1| PREDICTED: uncharacterized protein LOC100807449 isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|449438032|ref|XP_004136794.1| PREDICTED: uncharacterized protein LOC101218440 [Cucumis sativus] gi|449494823|ref|XP_004159656.1| PREDICTED: uncharacterized protein LOC101229453 [Cucumis sativus] Back     alignment and taxonomy information
>gi|357502053|ref|XP_003621315.1| hypothetical protein MTR_7g011790 [Medicago truncatula] gi|355496330|gb|AES77533.1| hypothetical protein MTR_7g011790 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224141033|ref|XP_002323879.1| predicted protein [Populus trichocarpa] gi|222866881|gb|EEF04012.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|18406090|ref|NP_566845.1| uncharacterized protein [Arabidopsis thaliana] gi|334185691|ref|NP_001189999.1| uncharacterized protein [Arabidopsis thaliana] gi|9294326|dbj|BAB02223.1| unnamed protein product [Arabidopsis thaliana] gi|227206342|dbj|BAH57226.1| AT3G29180 [Arabidopsis thaliana] gi|332644025|gb|AEE77546.1| uncharacterized protein [Arabidopsis thaliana] gi|332644026|gb|AEE77547.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15450962|gb|AAK96752.1| Unknown protein [Arabidopsis thaliana] gi|17978713|gb|AAL47350.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297815224|ref|XP_002875495.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297321333|gb|EFH51754.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query573
TAIR|locus:2093868513 AT3G29180 "AT3G29180" [Arabido 0.713 0.797 0.680 1.8e-148
TAIR|locus:2175648511 AT5G39430 "AT5G39430" [Arabido 0.713 0.800 0.654 3e-140
TAIR|locus:2014819504 AT1G13970 "AT1G13970" [Arabido 0.717 0.815 0.540 2e-111
TAIR|locus:2202877492 CW14 "AT1G59650" [Arabidopsis 0.729 0.849 0.463 2.3e-95
TAIR|locus:2012848485 AT1G10410 [Arabidopsis thalian 0.708 0.837 0.449 8.9e-92
TAIR|locus:2198866313 AT1G06050 "AT1G06050" [Arabido 0.226 0.415 0.272 1.5e-07
TAIR|locus:2179245286 AT5G25010 "AT5G25010" [Arabido 0.186 0.374 0.302 1.5e-07
TAIR|locus:2183705302 AT5G10750 "AT5G10750" [Arabido 0.111 0.211 0.338 1.4e-06
TAIR|locus:2182417811 AT5G35180 [Arabidopsis thalian 0.144 0.102 0.337 2.2e-06
TAIR|locus:2163548719 AT5G45560 [Arabidopsis thalian 0.129 0.102 0.306 8e-06
TAIR|locus:2093868 AT3G29180 "AT3G29180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1422 (505.6 bits), Expect = 1.8e-148, Sum P(2) = 1.8e-148
 Identities = 287/422 (68%), Positives = 331/422 (78%)

Query:   154 GKYEEYHESYVKIDG-GKPEKYSSKD-EFKGSNKSGVISTQGYDFSCSGKADEICNRRKK 211
             G+  ++  S   +DG GK E+Y     +  GS     +S   Y    SG +    N +KK
Sbjct:    98 GQVVQFESSSCFVDGKGKYEEYHETYLKIDGSKAEKFVSKGMYK-DPSGLSVLTGNNKKK 156

Query:   212 LLEHSYGSFKGFKDEKCNSEGKPLKLGLHRLNPSVSFNDKILSSAALGPQPQRKKSAVFR 271
             L++H+  SFKG KD K NS+ K L+  L RL P+VSFNDK L+S    P  Q++KSAV+R
Sbjct:   157 LMDHA--SFKGLKDPKRNSQEKTLRTSLSRLMPTVSFNDKTLNS----PTSQKRKSAVYR 210

Query:   272 LSFKRRSCDGEETTEQCTSKKFLYRPKAGFVIPCSTGEKLTPGCWAEIPPSTFKLRGETY 331
             LSFKRRSCDGEE TEQ   +K LYRPKAGF IP S  EK + G W+EIPPSTFKLRGETY
Sbjct:   211 LSFKRRSCDGEEVTEQ---RKLLYRPKAGFTIPSSGREKQSSGSWSEIPPSTFKLRGETY 267

Query:   332 FKDKRKSPAPEHSPFTPIGVDLFNCPRKINHIAQHLELPYLKADGKVPPLLIVNIQLPAY 391
             FKDK+KSPAP   P+TPIGVDLF CPRKI+HIAQH+ELP +KA+ K+P LL+VNIQLP Y
Sbjct:   268 FKDKKKSPAPNQCPYTPIGVDLFVCPRKIDHIAQHIELPNIKAEAKLPALLVVNIQLPTY 327

Query:   392 PAAMFLGDSDGEGMSLVLYFKVSENFEKVISPQYQESIKKLVEDEMEKVRGFAKDSIVPF 451
             PAAMFLGDSDGEGMS+VLYFK+ +N EK  S QYQESIKKLV DEMEKV+GFAKDS V F
Sbjct:   328 PAAMFLGDSDGEGMSIVLYFKLRDNHEKETSQQYQESIKKLVNDEMEKVKGFAKDSNVAF 387

Query:   452 RERLKIMAGLVNPEDLNMSSAEKKLVNAYNEKPVLSRPQHEFYKGPNYFEIDLDIHRFSY 511
             RERLKI+AGLVNPEDL +SS EKKLV AYNEKPVLSRPQH F+KGPNYFEIDLD+HRFSY
Sbjct:   388 RERLKIVAGLVNPEDLALSSTEKKLVQAYNEKPVLSRPQHNFFKGPNYFEIDLDVHRFSY 447

Query:   512 ISRKGFEAFRERLANGILDVGLTIQAQKPEELPEQALCCLRLNKIDFVDYGQIPTLMTIG 571
             ISRKG EAFR+RL NG LD+GLTIQAQKPEELPEQ LCCLRL+KIDFVD+GQIP L+ I 
Sbjct:   448 ISRKGLEAFRDRLKNGTLDLGLTIQAQKPEELPEQVLCCLRLSKIDFVDHGQIPMLL-IP 506

Query:   572 DD 573
             +D
Sbjct:   507 ED 508


GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2175648 AT5G39430 "AT5G39430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014819 AT1G13970 "AT1G13970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202877 CW14 "AT1G59650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012848 AT1G10410 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198866 AT1G06050 "AT1G06050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179245 AT5G25010 "AT5G25010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183705 AT5G10750 "AT5G10750" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182417 AT5G35180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163548 AT5G45560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00021019001
SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (564 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query573
pfam07059215 pfam07059, DUF1336, Protein of unknown function (D 1e-91
PLN00188719 PLN00188, PLN00188, enhanced disease resistance pr 0.002
>gnl|CDD|219281 pfam07059, DUF1336, Protein of unknown function (DUF1336) Back     alignment and domain information
 Score =  279 bits (717), Expect = 1e-91
 Identities = 110/245 (44%), Positives = 142/245 (57%), Gaps = 33/245 (13%)

Query: 316 WAEIPPSTFKLRGETYFKDKRKSPAPEHSPFTPIGVDLFNCPRKINHIAQHLELPYLKA- 374
           W+E  PSTFK+RG+TY KDK+K PA     +T IGVD F   +KI+HIA H +L   KA 
Sbjct: 1   WSEPDPSTFKVRGKTYLKDKKKIPAGN-PLYTLIGVDWFKSDKKIDHIANHPDLRVQKAA 59

Query: 375 DGKVPPLLIVNIQLPAYPAAMFLGDSDGEGMSLVLYFKVSENFEKVISPQYQESIKKLVE 434
              +P +LIVNIQ+P            GEG SLVLYF + E  EK +SP +   +++ V+
Sbjct: 60  KKGLPFVLIVNIQVP-----------GGEGYSLVLYFALEEPVEKELSPAFGSLLRRFVD 108

Query: 435 DEMEKVRGFAKDSIVPFRERLKIMAGLVNPEDLNMSSAEKKLVNAYNEKPVL--SRPQHE 492
            + +  R           ERLKI+  +V       S   ++LV  YNEKP L    PQ  
Sbjct: 109 GDEDAFR----------NERLKIIPRIVKG-----SWIVRQLV--YNEKPCLVGKAPQCN 151

Query: 493 FYKGPNYFEIDLDIHRFSYISRKGFEAFRERLANGILDVGLTIQAQKPEELPEQALCCLR 552
           +Y+GPNY EID+DI   S I+RKG E F   L N +LD+  TIQ Q  EELPE+ L  +R
Sbjct: 152 YYRGPNYLEIDVDIGS-SSIARKGLELFLGYLTNLVLDLAFTIQGQTEEELPERLLGAVR 210

Query: 553 LNKID 557
           LNKID
Sbjct: 211 LNKID 215


This family represents the C-terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function. Length = 215

>gnl|CDD|215094 PLN00188, PLN00188, enhanced disease resistance protein (EDR2); Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 573
PF07059227 DUF1336: Protein of unknown function (DUF1336); In 100.0
PLN00188719 enhanced disease resistance protein (EDR2); Provis 100.0
>PF07059 DUF1336: Protein of unknown function (DUF1336); InterPro: IPR009769 This entry represents the C terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=6.6e-74  Score=561.85  Aligned_cols=222  Identities=46%  Similarity=0.774  Sum_probs=207.8

Q ss_pred             cccCCCCCeEEcCCCCCCCCCcccCCCCCCcceeEeeeeecCCccchhhccccccccccCC-CCCcEEEEEEEcCCCccc
Q 008230          316 WAEIPPSTFKLRGETYFKDKRKSPAPEHSPFTPIGVDLFNCPRKINHIAQHLELPYLKADG-KVPPLLIVNIQLPAYPAA  394 (573)
Q Consensus       316 WSepd~s~FkVRG~~YlkDKkKvPA~~~aly~lvGVDlF~S~~KidhIA~~~~lp~~~~~~-~~PfvfIVNiQLPgyP~~  394 (573)
                      ||+|++++|+|||+|||+||+|+||+++ +|+++|||||+|++|++|||+|+.++..+... +.||+||||||||+||+.
T Consensus         1 Ws~p~~~~FkVRG~~Yl~DkkKvpa~~~-l~~lvgvDlf~s~~~~~hia~~~~~~~~~~~~~~~P~~fIVNlqvP~~p~~   79 (227)
T PF07059_consen    1 WSEPDASTFKVRGPNYLKDKKKVPAGPP-LFELVGVDLFKSDKKIDHIARRPSSPVQKALEKGVPFTFIVNLQVPGYPPS   79 (227)
T ss_pred             CCCCCCCEEEEeCCCcccCCCCCcCCCc-ceeeEEEEEEecCCcchhhhhCcCCccccccccCCCcEEEEEEEccCCccc
Confidence            9999999999999999999999999976 99999999999999999999999988766544 599999999999999999


Q ss_pred             ccCCCCCCCCeEEEEEEeeCcchhcccCchhHHHHHHHHHHHHHHhhcccCCCchhhh-cccceeeeccCCCcccchhHH
Q 008230          395 MFLGDSDGEGMSLVLYFKVSENFEKVISPQYQESIKKLVEDEMEKVRGFAKDSIVPFR-ERLKIMAGLVNPEDLNMSSAE  473 (573)
Q Consensus       395 mF~Gd~DGeg~SlVlYF~l~e~~~keisp~f~~ll~Rfl~de~ekVkgF~~d~dd~FR-eRFKLIp~VVngpwL~Lss~~  473 (573)
                      +| ++.||+|||+|+||++++++.++.++.+.++++||++++.         .+|+|| +||||||+|+||+|+      
T Consensus        80 ~f-~~~~~~~~s~V~Yf~~~~~~~~~~~~~~~~ll~rF~~gd~---------~~d~frn~RfKlIp~vv~gpwi------  143 (227)
T PF07059_consen   80 MF-GEIDGPGYSLVLYFRMPEPIEDDDSPPFGRLLHRFLNGDE---------VEDAFRNERFKLIPRVVNGPWI------  143 (227)
T ss_pred             cc-cccccCCceEEEEEecCCccccccCchhHHHHHHHHhcCc---------cchhhhhccEEEEEEEcCCchh------
Confidence            99 9999999999999999999988888899999999998520         128899 799999999999985      


Q ss_pred             HHHHHhh-CCcceeec--CccceecCCCeEEEEEecccchHHHHHHHHHHHhhhcceEEEEEEEeecCCCCCccccccce
Q 008230          474 KKLVNAY-NEKPVLSR--PQHEFYKGPNYFEIDLDIHRFSYISRKGFEAFRERLANGILDVGLTIQAQKPEELPEQALCC  550 (573)
Q Consensus       474 r~l~qav-n~KPvLir--pq~~Y~rG~NYlEIDVDIhSFS~IARk~l~lv~g~lk~LVVDmGFvIEGqteEELPErLLG~  550 (573)
                        +++++ |+||||++  ++|+||+|+||||||||||+ |+|||++++++++++++|||||||||||+++||||||||||
T Consensus       144 --vr~~v~~~kP~lig~~~~~~y~~g~~y~E~dvdi~s-s~~a~~~~~~~~~~~~~lvvd~gf~ieg~~~~ELPE~lLg~  220 (227)
T PF07059_consen  144 --VRKAVYNGKPVLIGKKLQHRYFRGPNYLEIDVDIHS-SYIARKVLHLVRGYLKKLVVDMGFVIEGQTEEELPERLLGC  220 (227)
T ss_pred             --hhhhhcCCCceeecCccceEEeeCCCeEEEEEEecc-HHHHHHHHHHHHhhhceEEEEEEEEecCCChhhCchheEeE
Confidence              55555 99999987  79999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             eeecccc
Q 008230          551 LRLNKID  557 (573)
Q Consensus       551 vRLnkID  557 (573)
                      +||++||
T Consensus       221 ~Rl~~id  227 (227)
T PF07059_consen  221 VRLNHID  227 (227)
T ss_pred             EEeeecC
Confidence            9999998



>PLN00188 enhanced disease resistance protein (EDR2); Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query573
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 61.0 bits (147), Expect = 8e-10
 Identities = 81/598 (13%), Positives = 158/598 (26%), Gaps = 193/598 (32%)

Query: 19  HHRSSK------CHRKIINSGPDGTNKLNNDPGSRVTDFAVSEYVHLDFEKGATTTCRRS 72
           HH   +       ++ I+       +         V +F   +    D  K   +     
Sbjct: 5   HHMDFETGEHQYQYKDIL---SVFEDAF-------VDNFDCKDV--QDMPKSILSKEEID 52

Query: 73  EVTNSAFHLTQMQ---WHLSQVDANVICQEDAWFDSVSILDSDSDDDFISVHGDGFPVAG 129
            +  S   ++      W L      ++     + + V  L  +    F+           
Sbjct: 53  HIIMSKDAVSGTLRLFWTLLSKQEEMV---QKFVEEV--LRINYK--FLM---------- 95

Query: 130 NPIGNISSSHMLQYESSSCFMDGKGKYEEYHE-------SYVKIDGGKPEKYSS-KDEFK 181
           +PI         + E     M  +  Y E  +        + K +  + + Y   +    
Sbjct: 96  SPI---------KTEQRQPSMMTR-MYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALL 145

Query: 182 GSNKSGVISTQGYDFSCSGK---ADEICNRRKKLLEHSYGSF---KGFKDEKCNSEGKPL 235
               +  +   G      GK   A ++C   K   +  +  F          CNS    L
Sbjct: 146 ELRPAKNVLIDG-VLGS-GKTWVALDVCLSYKVQCKMDFKIFWLNLK----NCNSPETVL 199

Query: 236 KLGLHRLNPSVSFNDKILSSAALGPQPQRKKSAVFRLS--FKRRSCDGEETTEQC----- 288
           ++ L +L   +  N    S  +      R  S    L    K +        E C     
Sbjct: 200 EM-LQKLLYQIDPNWTSRSDHSSNI-KLRIHSIQAELRRLLKSKP------YENCLLVLL 251

Query: 289 --TSKKFLYRPKAGFVIPC----STGEKLTPGCWAEIPPSTFKLRGETYFKDKRKSPAPE 342
              + K      A F + C    +T  K       ++   T  L   T       S    
Sbjct: 252 NVQNAKAW---NA-FNLSCKILLTTRFK-------QV---TDFLSAATT---THISLDHH 294

Query: 343 HSPFTPI-GVDLFNCPRKINHIAQHLELPYLKADGKVPPLLIVNIQLPAYPAAMFLGDSD 401
               TP     L    + ++   Q  +LP  +      P  +          ++   +S 
Sbjct: 295 SMTLTPDEVKSLLL--KYLDCRPQ--DLP--REVLTTNPRRL----------SII-AESI 337

Query: 402 GEGMSLVLYFK--VSENFEKVISPQYQESIKKLVEDEMEK------VRGFAKDSIVP--- 450
            +G++    +K    +    +I    + S+  L   E  K      V  F   + +P   
Sbjct: 338 RDGLATWDNWKHVNCDKLTTII----ESSLNVLEPAEYRKMFDRLSV--FPPSAHIPTIL 391

Query: 451 ---------FRERLKIMAGLVN-----------------------PEDLNMSSAEKKLVN 478
                      + + ++  L                          +  N  +  + +V+
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451

Query: 479 AYNEKPVLSRPQHEFYKGP--NYFEIDLDIHRFSYISR--------KGFEAFRERLAN 526
            YN     +    +        YF        +S+I          +    FR    +
Sbjct: 452 HYNIP--KTFDSDDLIPPYLDQYF--------YSHIGHHLKNIEHPERMTLFRMVFLD 499


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00