Citrus Sinensis ID: 008233

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570---
MAEPAYTVASDTETTGEEKTSSPFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPVIPVMEVRLPTVDDGHGWCAEALNRAYGSTLDLETVQPKKM
cccccccccccccccccccccccccccEEEEcccccccEEEEEEccEEEEEcccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccEEEEEEcccEEcccHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHcccEEEEEccHHHHHHHHHccccccccccccccccccEEEEEEccccccEEEEEEEcccEEEEEcccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccEEEccccccccccccccccccccEEEEccccccccEEEEEEEcccccccccccccEEEEcccccccccccEEEEEEEEcccccEEEEEEEccccccccEEEEcccccccHHHHHHHHHHHHHccccccccccccccccc
ccccEEEEEEccccccccHccccccccEEEEEccccEEEEEEEEcccEEEEEccccccccccEEEEcccHHHHHHHHHHcccccEcccccEEEHHHHHccccccHHHHcccccccEEEEcccccEEEEEEEEccEEEEEcHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEEHHHHHHHHccccccccccEEEcccccEEEEEEEcccccEEEEEEEEcccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccEEEEEEEEccEEEEEEEEHHHHHHHcHHHHHccHHHHHHHHHHHcccHHHccEEEEEcHHHHcHHHHHHHHHHccccccEcccccccHHHHHHHHHHHHHHcccccHHHHHcccccEccccEEEEEcccEEEEEEccccEccEEEEEEEEEccccccEEEEEEEEccccEHHHcEEEEEEEEEcccccccccccEEEEEEEcccccEEEEEEEcccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
maepaytvasdtettgeektsspfpeiaigidigtsqCSIAFWNGSEVELIKNTRNQKVMRSYVtfkdevpaggvstqLSHEHEMLSGAAIFNMKRligrvdtdpvvhaskslpflvqtvdiGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQlkrpirnvvltipvsfsrfQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVhenlgsgsEKIAVIFNMgagycdvtvsataggvsQIKAlsgsaiggEDLLQNMMRhlmpnseslfssygmnEIKSMALLRVATQDAIHKLSSETSVQINVDlgnglkvsknVTREEFEEVNQKVFEKCGSLITQCLHDAKVEiedlndvilvggcsyipkvRNLVQSTCKKVelyeginpleaAVSGAALEGavtsgindpfgnldlltiqvtplgigirangnnfvpiiprnttmparkdLVFTTVRDNQSEALIIVYEGegekveenHLLGYfkitgippspkgvpeinvcmdidaSSVLRVLVGvimpgnphpvipvmevrlptvddghgWCAEALNRAygstldletvqpkkm
maepaytvasdtettgeektsspfpEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVnnawrsttPEEVLAIFLVELRAMAEtqlkrpirnvvltipvsfsrfQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLssetsvqinvdlgnglKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIiprnttmparkdLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPVIPVMEVRLPTVDDGHGWCAEALNraygstldletvqpkkm
MAEPAYTVASDTETTGEEKTSSPFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAqqqqqSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPVIPVMEVRLPTVDDGHGWCAEALNRAYGSTLDLETVQPKKM
*************************EIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQ***********GSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSAIGGEDLLQNMMR********LFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGI*******************INDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPVIPVMEVRLPTVDDGHGWCAEALNRAYGSTLD*********
****************************IGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVH****SGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFS***MNEIKSMALLRVATQDAIHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVI**GN*****P*MEVRLPTVDDGHGWCAEALNRA********TV*PK**
*********************SPFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQ*********GSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPVIPVMEVRLPTVDDGHGWCAEALNRAYGSTLDLETVQPKKM
***PAYTVASDTETT********FPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPVIPVMEVRLPTVDDGHGWCAEALNRAYGSTLDLETV*****
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MAEPAYTVASDTETTGEEKTSSPFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPVIPVMEVRLPTVDDGHGWCAEALNRAYGSTLDLETVQPKKM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query573 2.2.26 [Sep-21-2011]
Q9SKY8563 Heat shock 70 kDa protein yes no 0.977 0.994 0.752 0.0
Q9LHA8 650 Probable mediator of RNA no no 0.837 0.738 0.372 3e-86
P09189 651 Heat shock cognate 70 kDa N/A no 0.830 0.731 0.371 2e-84
P22953 651 Probable mediator of RNA no no 0.837 0.737 0.366 7e-84
P26413645 Heat shock 70 kDa protein no no 0.835 0.742 0.366 2e-83
Q9S9N1646 Heat shock 70 kDa protein no no 0.846 0.750 0.361 2e-83
P25840 650 Heat shock 70 kDa protein N/A no 0.865 0.763 0.362 8e-83
P29357 653 Chloroplast envelope memb N/A no 0.837 0.735 0.368 6e-82
P83616672 78 kDa glucose-regulated yes no 0.830 0.708 0.355 2e-81
P83617672 78 kDa glucose-regulated N/A no 0.830 0.708 0.355 2e-81
>sp|Q9SKY8|HSP7H_ARATH Heat shock 70 kDa protein 8 OS=Arabidopsis thaliana GN=HSP70-8 PE=2 SV=1 Back     alignment and function desciption
 Score =  919 bits (2375), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/573 (75%), Positives = 503/573 (87%), Gaps = 13/573 (2%)

Query: 1   MAEPAYTVASDTETTGEEKTSSP--FPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQK 58
           MAE AYTVASD+E TGEEK+SS    PEIA+GIDIGTSQCSIA WNGS+V +++NTRNQK
Sbjct: 1   MAEAAYTVASDSENTGEEKSSSSPSLPEIALGIDIGTSQCSIAVWNGSQVHILRNTRNQK 60

Query: 59  VMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSLPFLVQ 118
           +++S+VTFKDEVPAGGVS QL+HE EML+GAAIFNMKRL+GRVDTDPVVHASK+LPFLVQ
Sbjct: 61  LIKSFVTFKDEVPAGGVSNQLAHEQEMLTGAAIFNMKRLVGRVDTDPVVHASKNLPFLVQ 120

Query: 119 TVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRF 178
           T+DIGVRPFIAALVNNAWRSTTPEEVLAIFLVELR MAE QLKRP+RNVVLT+PVSFSRF
Sbjct: 121 TLDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRLMAEAQLKRPVRNVVLTVPVSFSRF 180

Query: 179 QLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYC 238
           QLTR ERACAMAGLHVLRLMPEPTA+ALLYAQQQQ + H+N+GSGSE++AVIFNMGAGYC
Sbjct: 181 QLTRFERACAMAGLHVLRLMPEPTAIALLYAQQQQMTTHDNMGSGSERLAVIFNMGAGYC 240

Query: 239 DVTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVA 298
           DV V+ATAGGVSQIKAL+GS IGGED+LQN +RH+ P +E           ++  LLRVA
Sbjct: 241 DVAVTATAGGVSQIKALAGSPIGGEDILQNTIRHIAPPNE-----------EASGLLRVA 289

Query: 299 TQDAIHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVE 358
            QDAIH+L+ + +VQI VDLGNG K+SK + R EFEEVNQKVFE+C  L+ QCL DA+V 
Sbjct: 290 AQDAIHRLTDQENVQIEVDLGNGNKISKVLDRLEFEEVNQKVFEECERLVVQCLRDARVN 349

Query: 359 IEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPF 418
             D++D+I+VGGCSYIPKVR ++++ CKK E+Y+G+NPLEAAV GAALEGAVTSGI+DPF
Sbjct: 350 GGDIDDLIMVGGCSYIPKVRTIIKNVCKKDEIYKGVNPLEAAVRGAALEGAVTSGIHDPF 409

Query: 419 GNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGE 478
           G+LDLLTIQ TPL +G+RANGN F+P+IPRNT +PARKDL FTTV+DNQ EALII+YEGE
Sbjct: 410 GSLDLLTIQATPLAVGVRANGNKFIPVIPRNTMVPARKDLFFTTVQDNQKEALIIIYEGE 469

Query: 479 GEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPVIPVME 538
           GE VEENHLLGYFK+ GIPP+PKGVPEINVCMDIDAS+ LRV   V+MPG+  PV+PV+E
Sbjct: 470 GETVEENHLLGYFKLVGIPPAPKGVPEINVCMDIDASNALRVFAAVLMPGSSSPVVPVIE 529

Query: 539 VRLPTVDDGHGWCAEALNRAYGSTLDLETVQPK 571
           VR+PTVDDGHGWCA+ALN  YG+TLDL T+Q K
Sbjct: 530 VRMPTVDDGHGWCAQALNVKYGATLDLITLQRK 562
In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c OS=Arabidopsis thaliana GN=MED37C PE=1 SV=1 Back     alignment and function description
>sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1 Back     alignment and function description
>sp|P22953|MD37E_ARATH Probable mediator of RNA polymerase II transcription subunit 37e OS=Arabidopsis thaliana GN=MED37E PE=1 SV=3 Back     alignment and function description
>sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1 Back     alignment and function description
>sp|Q9S9N1|HSP7E_ARATH Heat shock 70 kDa protein 5 OS=Arabidopsis thaliana GN=HSP70-5 PE=2 SV=1 Back     alignment and function description
>sp|P25840|HSP70_CHLRE Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2 Back     alignment and function description
>sp|P29357|HSP7E_SPIOL Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3 Back     alignment and function description
>sp|P83616|GRP78_ASPNG 78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1 Back     alignment and function description
>sp|P83617|GRP78_ASPKA 78 kDa glucose-regulated protein homolog OS=Aspergillus kawachii GN=bipA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query573
224099789572 predicted protein [Populus trichocarpa] 0.996 0.998 0.828 0.0
356497462571 PREDICTED: heat shock cognate 70 kDa pro 0.994 0.998 0.812 0.0
224111194572 predicted protein [Populus trichocarpa] 0.996 0.998 0.821 0.0
225432646574 PREDICTED: heat shock cognate 70 kDa pro 1.0 0.998 0.780 0.0
147832637574 hypothetical protein VITISV_040532 [Viti 1.0 0.998 0.778 0.0
357480851558 Heat shock 70 kDa protein [Medicago trun 0.963 0.989 0.776 0.0
297789928563 HSP70T-2 [Arabidopsis lyrata subsp. lyra 0.977 0.994 0.762 0.0
449432706571 PREDICTED: heat shock 70 kDa protein 8-l 0.994 0.998 0.767 0.0
15225187563 heat-shock protein 70T-2 [Arabidopsis th 0.977 0.994 0.752 0.0
255551475556 heat shock protein 70kD, putative [Ricin 0.968 0.998 0.777 0.0
>gi|224099789|ref|XP_002311619.1| predicted protein [Populus trichocarpa] gi|222851439|gb|EEE88986.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  992 bits (2565), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/571 (82%), Positives = 528/571 (92%)

Query: 1   MAEPAYTVASDTETTGEEKTSSPFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVM 60
           MAEP YTVASD+E+TGEEK+SS FPE AIGIDIGTSQCS+A WNGS+VEL+KNTRNQK+M
Sbjct: 1   MAEPQYTVASDSESTGEEKSSSAFPETAIGIDIGTSQCSVAVWNGSQVELLKNTRNQKLM 60

Query: 61  RSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSLPFLVQTV 120
           RSYVTFKDEVP+GGVS QLSHE+E+LSGAAIFNMKRLIGRVDTDPVVHASK LPFLVQT+
Sbjct: 61  RSYVTFKDEVPSGGVSNQLSHEYEILSGAAIFNMKRLIGRVDTDPVVHASKRLPFLVQTL 120

Query: 121 DIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQL 180
           DIGVRPFIAALV+NAWRSTTPEEVLAIFLVELRAMAE QLKRPIRNVVLTIPVSFSRFQL
Sbjct: 121 DIGVRPFIAALVSNAWRSTTPEEVLAIFLVELRAMAEVQLKRPIRNVVLTIPVSFSRFQL 180

Query: 181 TRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDV 240
           TRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQ+VHEN+GSGSEK A+IFNMGAGYCDV
Sbjct: 181 TRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQTVHENMGSGSEKNALIFNMGAGYCDV 240

Query: 241 TVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQ 300
            V+ATAGGVSQIKAL+G+AIGGED+LQNMM+HL+PNSE+LF S+G+NEIKS+ LLRVAT+
Sbjct: 241 AVTATAGGVSQIKALAGAAIGGEDMLQNMMQHLLPNSENLFLSHGINEIKSLGLLRVATE 300

Query: 301 DAIHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIE 360
           DAIH+LSS++SVQ++VDL NG K+ K VTREEFEEVN K+FEKC SL+TQCL D+KV+IE
Sbjct: 301 DAIHRLSSQSSVQVDVDLRNGSKICKVVTREEFEEVNLKIFEKCESLLTQCLRDSKVDIE 360

Query: 361 DLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGN 420
           DL DVILVGGCSYIP +RN+V+  CKK ELY+ INPLEAAV GAALEGAV SGI+DPFG+
Sbjct: 361 DLTDVILVGGCSYIPNIRNVVKGVCKKEELYKVINPLEAAVCGAALEGAVASGISDPFGS 420

Query: 421 LDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGE 480
           LDLLTIQ TPLG+GIRA+GN+FVPIIPRNTTMPARK+L+FTT  DNQ+EALI+VYEGEG 
Sbjct: 421 LDLLTIQATPLGVGIRADGNSFVPIIPRNTTMPARKELIFTTTHDNQTEALILVYEGEGT 480

Query: 481 KVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPVIPVMEVR 540
           KVEENHLLGYFKI GIP +PKG+PEINVCMDIDAS+ LRV  GV+MPG   P+ P MEVR
Sbjct: 481 KVEENHLLGYFKIMGIPAAPKGIPEINVCMDIDASNALRVFAGVVMPGTDQPMAPFMEVR 540

Query: 541 LPTVDDGHGWCAEALNRAYGSTLDLETVQPK 571
           +PTVDDGHGWCAEALNR YGSTLDL TVQ K
Sbjct: 541 MPTVDDGHGWCAEALNRTYGSTLDLVTVQKK 571

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356497462|ref|XP_003517579.1| PREDICTED: heat shock cognate 70 kDa protein 4-like [Glycine max] Back     alignment and taxonomy information
>gi|224111194|ref|XP_002315776.1| predicted protein [Populus trichocarpa] gi|222864816|gb|EEF01947.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225432646|ref|XP_002282143.1| PREDICTED: heat shock cognate 70 kDa protein 4 [Vitis vinifera] gi|297737039|emb|CBI26240.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147832637|emb|CAN68225.1| hypothetical protein VITISV_040532 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357480851|ref|XP_003610711.1| Heat shock 70 kDa protein [Medicago truncatula] gi|355512046|gb|AES93669.1| Heat shock 70 kDa protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|297789928|ref|XP_002862884.1| HSP70T-2 [Arabidopsis lyrata subsp. lyrata] gi|297308648|gb|EFH39143.1| HSP70T-2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449432706|ref|XP_004134140.1| PREDICTED: heat shock 70 kDa protein 8-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15225187|ref|NP_180771.1| heat-shock protein 70T-2 [Arabidopsis thaliana] gi|30685183|ref|NP_850183.1| heat-shock protein 70T-2 [Arabidopsis thaliana] gi|75313546|sp|Q9SKY8.1|HSP7H_ARATH RecName: Full=Heat shock 70 kDa protein 8; AltName: Full=Heat shock protein 70-8; Short=AtHsp70-8; AltName: Full=Heat-shock protein 70T-2 gi|4263707|gb|AAD15393.1| 70kD heat shock protein [Arabidopsis thaliana] gi|21703121|gb|AAM74502.1| At2g32120/F22D22.13 [Arabidopsis thaliana] gi|24111419|gb|AAN46859.1| At2g32120/F22D22.13 [Arabidopsis thaliana] gi|330253542|gb|AEC08636.1| heat-shock protein 70T-2 [Arabidopsis thaliana] gi|330253543|gb|AEC08637.1| heat-shock protein 70T-2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255551475|ref|XP_002516783.1| heat shock protein 70kD, putative [Ricinus communis] gi|223543871|gb|EEF45397.1| heat shock protein 70kD, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query573
TAIR|locus:2045457563 HSP70T-2 "heat-shock protein 7 0.977 0.994 0.746 5.7e-233
TAIR|locus:2101222 650 HSP70 "heat shock protein 70" 0.842 0.743 0.370 1.4e-80
TAIR|locus:2181833 651 HSC70-1 "heat shock cognate pr 0.842 0.741 0.364 1.1e-78
TAIR|locus:2200462646 Hsp70b "heat shock protein 70B 0.846 0.750 0.361 2.3e-78
UNIPROTKB|A1DFN8672 NFIA_081390 "ER Hsp70 chaperon 0.830 0.708 0.361 9e-77
UNIPROTKB|B0XV51672 AFUB_021670 "ER Hsp70 chaperon 0.830 0.708 0.359 1.9e-76
UNIPROTKB|Q4WHP9672 AFUA_2G04620 "Hsp70 chaperone 0.830 0.708 0.359 1.9e-76
TAIR|locus:2074984 649 AT3G09440 [Arabidopsis thalian 0.842 0.744 0.360 1.9e-76
TAIR|locus:2181818 653 Hsp70-2 [Arabidopsis thaliana 0.842 0.739 0.354 2.4e-76
UNIPROTKB|A2QW80672 bipA "DnaK-type molecular chap 0.830 0.708 0.357 1.7e-75
TAIR|locus:2045457 HSP70T-2 "heat-shock protein 70T-2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2247 (796.0 bits), Expect = 5.7e-233, P = 5.7e-233
 Identities = 428/573 (74%), Positives = 500/573 (87%)

Query:     1 MAEPAYTVASDTETTGEEKTSS-P-FPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQK 58
             MAE AYTVASD+E TGEEK+SS P  PEIA+GIDIGTSQCSIA WNGS+V +++NTRNQK
Sbjct:     1 MAEAAYTVASDSENTGEEKSSSSPSLPEIALGIDIGTSQCSIAVWNGSQVHILRNTRNQK 60

Query:    59 VMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSLPFLVQ 118
             +++S+VTFKDEVPAGGVS QL+HE EML+GAAIFNMKRL+GRVDTDPVVHASK+LPFLVQ
Sbjct:    61 LIKSFVTFKDEVPAGGVSNQLAHEQEMLTGAAIFNMKRLVGRVDTDPVVHASKNLPFLVQ 120

Query:   119 TVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRF 178
             T+DIGVRPFIAALVNNAWRSTTPEEVLAIFLVELR MAE QLKRP+RNVVLT+PVSFSRF
Sbjct:   121 TLDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRLMAEAQLKRPVRNVVLTVPVSFSRF 180

Query:   179 QLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYC 238
             QLTR ERACAMAGLHVLRLMPEPTA+ALLYA     + H+N+GSGSE++AVIFNMGAGYC
Sbjct:   181 QLTRFERACAMAGLHVLRLMPEPTAIALLYAQQQQMTTHDNMGSGSERLAVIFNMGAGYC 240

Query:   239 DVTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVA 298
             DV V+ATAGGVSQIKAL+GS IGGED+LQN +RH+ P +E           ++  LLRVA
Sbjct:   241 DVAVTATAGGVSQIKALAGSPIGGEDILQNTIRHIAPPNE-----------EASGLLRVA 289

Query:   299 TQDAIHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVE 358
              QDAIH+L+ + +VQI VDLGNG K+SK + R EFEEVNQKVFE+C  L+ QCL DA+V 
Sbjct:   290 AQDAIHRLTDQENVQIEVDLGNGNKISKVLDRLEFEEVNQKVFEECERLVVQCLRDARVN 349

Query:   359 IEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPF 418
               D++D+I+VGGCSYIPKVR ++++ CKK E+Y+G+NPLEAAV GAALEGAVTSGI+DPF
Sbjct:   350 GGDIDDLIMVGGCSYIPKVRTIIKNVCKKDEIYKGVNPLEAAVRGAALEGAVTSGIHDPF 409

Query:   419 GNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGE 478
             G+LDLLTIQ TPL +G+RANGN F+P+IPRNT +PARKDL FTTV+DNQ EALII+YEGE
Sbjct:   410 GSLDLLTIQATPLAVGVRANGNKFIPVIPRNTMVPARKDLFFTTVQDNQKEALIIIYEGE 469

Query:   479 GEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPVIPVME 538
             GE VEENHLLGYFK+ GIPP+PKGVPEINVCMDIDAS+ LRV   V+MPG+  PV+PV+E
Sbjct:   470 GETVEENHLLGYFKLVGIPPAPKGVPEINVCMDIDASNALRVFAAVLMPGSSSPVVPVIE 529

Query:   539 VRLPTVDDGHGWCAEALNRAYGSTLDLETVQPK 571
             VR+PTVDDGHGWCA+ALN  YG+TLDL T+Q K
Sbjct:   530 VRMPTVDDGHGWCAQALNVKYGATLDLITLQRK 562
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006457 "protein folding" evidence=RCA;TAS
GO:0009408 "response to heat" evidence=IEP;RCA
GO:0009644 "response to high light intensity" evidence=IEP;RCA
GO:0042542 "response to hydrogen peroxide" evidence=IEP;RCA
GO:0010286 "heat acclimation" evidence=RCA
TAIR|locus:2101222 HSP70 "heat shock protein 70" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2181833 HSC70-1 "heat shock cognate protein 70-1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200462 Hsp70b "heat shock protein 70B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A1DFN8 NFIA_081390 "ER Hsp70 chaperone BiP, putative" [Neosartorya fischeri NRRL 181 (taxid:331117)] Back     alignment and assigned GO terms
UNIPROTKB|B0XV51 AFUB_021670 "ER Hsp70 chaperone BiP, putative" [Aspergillus fumigatus A1163 (taxid:451804)] Back     alignment and assigned GO terms
UNIPROTKB|Q4WHP9 AFUA_2G04620 "Hsp70 chaperone BiP/Kar2, putative" [Aspergillus fumigatus Af293 (taxid:330879)] Back     alignment and assigned GO terms
TAIR|locus:2074984 AT3G09440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2181818 Hsp70-2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A2QW80 bipA "DnaK-type molecular chaperone bipA-Aspergillus niger" [Aspergillus niger CBS 513.88 (taxid:425011)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SKY8HSP7H_ARATHNo assigned EC number0.75210.97730.9946yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
grail3.0009008001
hypothetical protein (572 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XIII.1526.1
annotation not avaliable (81 aa)
  •     0.506
estExt_fgenesh4_pg.C_LG_I2723
hypothetical protein (283 aa)
  •     0.506
gw1.XVIII.3157.1
annotation not avaliable (112 aa)
  •     0.504
gw1.41.327.1
hypothetical protein (212 aa)
  •     0.504
estExt_fgenesh4_pg.C_LG_X1023
hypothetical protein (175 aa)
  •     0.504
gw1.6150.1.1
annotation not avaliable (71 aa)
  •     0.503
grail3.0096001803
hypothetical protein (221 aa)
  •     0.503
estExt_fgenesh4_pm.C_1330037
hypothetical protein (160 aa)
  •     0.503
estExt_Genewise1_v1.C_LG_XIII0656
hypothetical protein (163 aa)
  •     0.503
estExt_Genewise1_v1.C_LG_II1524
hypothetical protein (170 aa)
  •     0.502

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query573
pfam00012598 pfam00012, HSP70, Hsp70 protein 1e-102
COG0443579 COG0443, DnaK, Molecular chaperone [Posttranslatio 6e-96
cd10170369 cd10170, HSP70_NBD, Nucleotide-binding domain of t 1e-90
PTZ00009 653 PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro 9e-90
TIGR02350595 TIGR02350, prok_dnaK, chaperone protein DnaK 3e-87
PTZ00400663 PTZ00400, PTZ00400, DnaK-type molecular chaperone; 1e-76
PRK00290627 PRK00290, dnaK, molecular chaperone DnaK; Provisio 3e-73
PTZ00186657 PTZ00186, PTZ00186, heat shock 70 kDa precursor pr 4e-73
PRK13411 653 PRK13411, PRK13411, molecular chaperone DnaK; Prov 1e-70
CHL00094621 CHL00094, dnaK, heat shock protein 70 6e-65
PLN03184 673 PLN03184, PLN03184, chloroplast Hsp70; Provisional 2e-62
TIGR01991599 TIGR01991, HscA, Fe-S protein assembly chaperone H 4e-62
PRK13410 668 PRK13410, PRK13410, molecular chaperone DnaK; Prov 4e-61
cd10241374 cd10241, HSPA5-like_NBD, Nucleotide-binding domain 2e-60
cd10233376 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding 2e-60
PRK05183616 PRK05183, hscA, chaperone protein HscA; Provisiona 7e-50
cd10236355 cd10236, HscA_like_NBD, Nucleotide-binding domain 7e-49
cd10234376 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d 1e-47
cd10237417 cd10237, HSPA13-like_NBD, Nucleotide-binding domai 2e-47
cd10228381 cd10228, HSPA4_like_NDB, Nucleotide-binding domain 3e-46
cd10235339 cd10235, HscC_like_NBD, Nucleotide-binding domain 3e-45
cd11734373 cd11734, Ssq1_like_NBD, Nucleotide-binding domain 1e-43
PRK01433595 PRK01433, hscA, chaperone protein HscA; Provisiona 2e-43
cd11733377 cd11733, HSPA9-like_NBD, Nucleotide-binding domain 4e-43
cd10238375 cd10238, HSPA14-like_NBD, Nucleotide-binding domai 3e-40
cd10230388 cd10230, HYOU1-like_NBD, Nucleotide-binding domain 2e-39
cd10232386 cd10232, ScSsz1p_like_NBD, Nucleotide-binding doma 7e-35
cd11739383 cd11739, HSPH1_NBD, Nucleotide-binding domain of H 4e-33
cd10231415 cd10231, YegD_like, Escherichia coli YegD, a putat 3e-28
cd11737383 cd11737, HSPA4_NBD, Nucleotide-binding domain of H 3e-28
cd11732377 cd11732, HSP105-110_like_NBD, Nucleotide-binding d 3e-27
cd11738383 cd11738, HSPA4L_NBD, Nucleotide-binding domain of 2e-25
cd10229404 cd10229, HSPA12_like_NBD, Nucleotide-binding domai 7e-05
>gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein Back     alignment and domain information 
 Score =  319 bits (821), Expect = e-102
 Identities = 178/516 (34%), Positives = 272/516 (52%), Gaps = 59/516 (11%)

Query: 28  AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLS 87
            IGID+GT+   +A   G   E+I N    +   S V F  +              E L 
Sbjct: 1   VIGIDLGTTNSCVAVMEGGGPEVIANDEGNRTTPSVVAFTPK--------------ERLV 46

Query: 88  GAA------------IFNMKRLIGRVDTDPVVHA-SKSLPFLVQ---TVDIGVRPFIAAL 131
           G A            +F++KRLIGR  +DPVV    K +P+ V      D GV       
Sbjct: 47  GQAAKRQAVTNPKNTVFSVKRLIGRKFSDPVVQRDIKHVPYKVVKLPNGDAGVE------ 100

Query: 132 VNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAG 191
           V     + TPE++ A+ L +L+  AE  L  P+ + V+T+P  F+  Q    + A  +AG
Sbjct: 101 VRYLGETFTPEQISAMVLQKLKETAEAYLGEPVTDAVITVPAYFNDAQRQATKDAGRIAG 160

Query: 192 LHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQ 251
           L+VLR++ EPTA AL Y   ++           E+  ++F++G G  DV++     GV +
Sbjct: 161 LNVLRIINEPTAAALAYGLDKKDK---------ERNVLVFDLGGGTFDVSILEIGDGVFE 211

Query: 252 IKALSG-SAIGGEDLLQNMMRHLMPNSESLFSSYGM---NEIKSMALLRVATQDAIHKLS 307
           + A +G + +GGED    ++ H     E     YG+    + +++  LR A + A  +LS
Sbjct: 212 VLATNGDTHLGGEDFDNRLVDHF---VEEFKKKYGIDLSKDPRALQRLREAAEKAKIELS 268

Query: 308 S-ETSVQINVD--LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLND 364
           S +T + +     + +G  VS  +TR +FEE+   +FE+    + + L DAK+   ++++
Sbjct: 269 SNQTEINLPFITAMADGKDVSGTLTRAKFEELCADLFERTLEPVEKALKDAKLSKSEIDE 328

Query: 365 VILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLL 424
           V+LVGG + IP V+ LV+    K E  +G+NP EA   GAA++  V SG  D     D+L
Sbjct: 329 VVLVGGSTRIPAVQELVKEFFGK-EPSKGVNPDEAVAIGAAVQAGVLSGTFD---VKDVL 384

Query: 425 TIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEE 484
            + VTPL +GI   G     +IPRNTT+P +K  +F+T  DNQ+   I VY+GE E   +
Sbjct: 385 LLDVTPLSLGIETLGGVMTKLIPRNTTIPTKKSQIFSTAADNQTAVEIQVYQGEREMAPD 444

Query: 485 NHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 520
           N LLG F++ GIPP+P+GVP+I V  DIDA+ +L V
Sbjct: 445 NKLLGSFELDGIPPAPRGVPQIEVTFDIDANGILTV 480

Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region. Length = 598
>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family Back     alignment and domain information
>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional Back     alignment and domain information
>gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK Back     alignment and domain information
>gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70 Back     alignment and domain information
>gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional Back     alignment and domain information
>gnl|CDD|233673 TIGR01991, HscA, Fe-S protein assembly chaperone HscA Back     alignment and domain information
>gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins Back     alignment and domain information
>gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins Back     alignment and domain information
>gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|212678 cd10236, HscA_like_NBD, Nucleotide-binding domain of HscA and similar proteins Back     alignment and domain information
>gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins Back     alignment and domain information
>gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins Back     alignment and domain information
>gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins Back     alignment and domain information
>gnl|CDD|212677 cd10235, HscC_like_NBD, Nucleotide-binding domain of Escherichia coli HscC and similar proteins Back     alignment and domain information
>gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins Back     alignment and domain information
>gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|212683 cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins Back     alignment and domain information
>gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins Back     alignment and domain information
>gnl|CDD|212672 cd10230, HYOU1-like_NBD, Nucleotide-binding domain of human HYOU1 and similar proteins Back     alignment and domain information
>gnl|CDD|212674 cd10232, ScSsz1p_like_NBD, Nucleotide-binding domain of Saccharmomyces cerevisiae Ssz1pp and similar proteins Back     alignment and domain information
>gnl|CDD|212689 cd11739, HSPH1_NBD, Nucleotide-binding domain of HSPH1 Back     alignment and domain information
>gnl|CDD|212673 cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins Back     alignment and domain information
>gnl|CDD|212687 cd11737, HSPA4_NBD, Nucleotide-binding domain of HSPA4 Back     alignment and domain information
>gnl|CDD|212682 cd11732, HSP105-110_like_NBD, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4, HYOU1, and similar proteins Back     alignment and domain information
>gnl|CDD|212688 cd11738, HSPA4L_NBD, Nucleotide-binding domain of HSPA4L Back     alignment and domain information
>gnl|CDD|212671 cd10229, HSPA12_like_NBD, Nucleotide-binding domain of HSPA12A, HSPA12B and similar proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 573
KOG0100663 consensus Molecular chaperones GRP78/BiP/KAR2, HSP 100.0
PTZ00186657 heat shock 70 kDa precursor protein; Provisional 100.0
PTZ00009 653 heat shock 70 kDa protein; Provisional 100.0
PRK13410 668 molecular chaperone DnaK; Provisional 100.0
PTZ00400663 DnaK-type molecular chaperone; Provisional 100.0
PRK13411 653 molecular chaperone DnaK; Provisional 100.0
PRK00290627 dnaK molecular chaperone DnaK; Provisional 100.0
PLN03184 673 chloroplast Hsp70; Provisional 100.0
TIGR01991599 HscA Fe-S protein assembly chaperone HscA. The Hea 100.0
KOG0101620 consensus Molecular chaperones HSP70/HSC70, HSP70 100.0
PRK05183616 hscA chaperone protein HscA; Provisional 100.0
TIGR02350595 prok_dnaK chaperone protein DnaK. Members of this 100.0
CHL00094621 dnaK heat shock protein 70 100.0
KOG0102640 consensus Molecular chaperones mortalin/PBP74/GRP7 100.0
PRK01433595 hscA chaperone protein HscA; Provisional 100.0
PF00012602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 100.0
COG0443579 DnaK Molecular chaperone [Posttranslational modifi 100.0
KOG0103 727 consensus Molecular chaperones HSP105/HSP110/SSE1, 100.0
KOG0104 902 consensus Molecular chaperones GRP170/SIL1, HSP70 100.0
PRK11678450 putative chaperone; Provisional 100.0
PRK13928336 rod shape-determining protein Mbl; Provisional 100.0
PRK13929335 rod-share determining protein MreBH; Provisional 100.0
PRK13927334 rod shape-determining protein MreB; Provisional 100.0
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 100.0
PRK13930335 rod shape-determining protein MreB; Provisional 100.0
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 99.98
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 99.96
PRK15080267 ethanolamine utilization protein EutJ; Provisional 99.95
COG1077342 MreB Actin-like ATPase involved in cell morphogene 99.95
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 99.89
PRK09472420 ftsA cell division protein FtsA; Reviewed 99.88
COG0849418 ftsA Cell division ATPase FtsA [Cell division and 99.77
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 99.71
smart00268373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 99.68
PRK13917344 plasmid segregation protein ParM; Provisional 99.62
PTZ00280414 Actin-related protein 3; Provisional 99.53
COG4820277 EutJ Ethanolamine utilization protein, possible ch 99.51
TIGR03739320 PRTRC_D PRTRC system protein D. A novel genetic sy 99.49
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 99.46
PTZ00452375 actin; Provisional 99.4
PTZ00004378 actin-2; Provisional 99.38
PTZ00466380 actin-like protein; Provisional 99.35
PTZ00281376 actin; Provisional 99.34
PF06406318 StbA: StbA protein; InterPro: IPR009440 This entry 99.29
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 99.22
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 99.15
KOG0679426 consensus Actin-related protein - Arp4p/Act3p [Cyt 98.91
PRK10719475 eutA reactivating factor for ethanolamine ammonia 98.76
COG5277444 Actin and related proteins [Cytoskeleton] 98.58
PF075201002 SrfB: Virulence factor SrfB; InterPro: IPR009216 T 98.57
COG4972354 PilM Tfp pilus assembly protein, ATPase PilM [Cell 98.47
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 98.47
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 98.45
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 98.3
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 98.24
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 98.21
PF08841332 DDR: Diol dehydratase reactivase ATPase-like domai 97.6
COG44571014 SrfB Uncharacterized protein conserved in bacteria 97.57
KOG0676372 consensus Actin and related proteins [Cytoskeleton 97.54
PRK13317277 pantothenate kinase; Provisional 97.5
TIGR02259432 benz_CoA_red_A benzoyl-CoA reductase, bcr type, su 97.4
KOG0797618 consensus Actin-related protein [Cytoskeleton] 97.2
PF06277473 EutA: Ethanolamine utilisation protein EutA; Inter 97.14
PF02782198 FGGY_C: FGGY family of carbohydrate kinases, C-ter 96.71
KOG0680400 consensus Actin-related protein - Arp6p [Cytoskele 96.46
KOG0677389 consensus Actin-related protein Arp2/3 complex, su 96.34
PRK15027484 xylulokinase; Provisional 95.98
PF14574412 DUF4445: Domain of unknown function (DUF4445); PDB 95.8
PLN02669556 xylulokinase 95.76
TIGR01315541 5C_CHO_kinase FGGY-family pentulose kinase. This m 95.7
TIGR00555279 panK_eukar pantothenate kinase, eukaryotic/staphyl 95.46
PRK11031496 guanosine pentaphosphate phosphohydrolase; Provisi 95.29
TIGR02628465 fuculo_kin_coli L-fuculokinase. Members of this fa 95.24
PF01968290 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr 95.24
PRK10854513 exopolyphosphatase; Provisional 95.2
TIGR01312481 XylB D-xylulose kinase. D-xylulose kinase (XylB) g 95.03
PRK00047498 glpK glycerol kinase; Provisional 94.98
PRK04123548 ribulokinase; Provisional 94.91
TIGR01234536 L-ribulokinase L-ribulokinase. This enzyme catalyz 94.83
TIGR01311493 glycerol_kin glycerol kinase. This model describes 94.82
PTZ00294504 glycerol kinase-like protein; Provisional 94.78
PRK10331470 L-fuculokinase; Provisional 94.74
TIGR01314505 gntK_FGGY gluconate kinase, FGGY type. Gluconate i 94.73
COG4819473 EutA Ethanolamine utilization protein, possible ch 94.61
PLN02295512 glycerol kinase 94.49
KOG2517516 consensus Ribulose kinase and related carbohydrate 94.33
TIGR02627454 rhamnulo_kin rhamnulokinase. This model describes 94.19
COG1069544 AraB Ribulose kinase [Energy production and conver 94.17
PRK10939520 autoinducer-2 (AI-2) kinase; Provisional 94.03
KOG0681 645 consensus Actin-related protein - Arp5p [Cytoskele 93.96
PF02541285 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I 93.71
smart00842187 FtsA Cell division protein FtsA. FtsA is essential 93.69
PRK10640471 rhaB rhamnulokinase; Provisional 93.4
PRK14878323 UGMP family protein; Provisional 93.26
PTZ00340345 O-sialoglycoprotein endopeptidase-like protein; Pr 93.04
COG0248492 GppA Exopolyphosphatase [Nucleotide transport and 92.95
PF13941457 MutL: MutL protein 92.92
COG1070502 XylB Sugar (pentulose and hexulose) kinases [Carbo 92.62
KOG2531545 consensus Sugar (pentulose and hexulose) kinases [ 92.55
TIGR03706300 exo_poly_only exopolyphosphatase. It appears that 92.02
TIGR00744318 ROK_glcA_fam ROK family protein (putative glucokin 91.95
TIGR00329305 gcp_kae1 metallohydrolase, glycoprotease/Kae1 fami 91.95
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 91.63
PLN02666 1275 5-oxoprolinase 91.43
KOG2708336 consensus Predicted metalloprotease with chaperone 91.39
PF07318343 DUF1464: Protein of unknown function (DUF1464); In 90.48
PRK09604332 UGMP family protein; Validated 90.15
COG1548330 Predicted transcriptional regulator/sugar kinase [ 90.08
PTZ002971452 pantothenate kinase; Provisional 90.04
KOG0681645 consensus Actin-related protein - Arp5p [Cytoskele 89.04
PF03702364 UPF0075: Uncharacterised protein family (UPF0075); 87.89
PRK09698302 D-allose kinase; Provisional 86.48
COG0533342 QRI7 Metal-dependent proteases with possible chape 86.34
KOG1385453 consensus Nucleoside phosphatase [Nucleotide trans 84.41
TIGR03281326 methan_mark_12 putative methanogenesis marker prot 83.86
PLN02920398 pantothenate kinase 1 81.79
PRK09585365 anmK anhydro-N-acetylmuramic acid kinase; Reviewed 81.49
PRK00976326 hypothetical protein; Provisional 81.11
COG3426358 Butyrate kinase [Energy production and conversion] 80.99
COG0554499 GlpK Glycerol kinase [Energy production and conver 80.1
>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=6.9e-113  Score=827.11  Aligned_cols=510  Identities=34%  Similarity=0.558  Sum_probs=488.7

Q ss_pred             CCCeEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEeCCceEEcCChHHHhhh-ccCccchhhHhhHhcCCCC
Q 008233           24 FPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRVD  102 (573)
Q Consensus        24 ~~~~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~~  102 (573)
                      ....+||||+|||||||+++++|++++|.|++|+|.+||+|+|.++++++|   ++|+++ ..+|++++++.||+||+.|
T Consensus        34 ~~gtvigIdLGTTYsCVgV~kNgrvEIiANdQGNRItPSyVaFt~derLiG---dAAKNQ~~~NPenTiFD~KRLIGr~~  110 (663)
T KOG0100|consen   34 KLGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTDDERLIG---DAAKNQLTSNPENTIFDAKRLIGRKF  110 (663)
T ss_pred             ccceEEEEecCCceeeEEEEeCCeEEEEecCCCCccccceeeeccchhhhh---hHhhcccccCcccceechHHHhCccc
Confidence            345899999999999999999999999999999999999999999999999   999999 9999999999999999999


Q ss_pred             CChhhhh-cCCCCeeEEEeeCCCccEEEEEec-CceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHHH
Q 008233          103 TDPVVHA-SKSLPFLVQTVDIGVRPFIAALVN-NAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQL  180 (573)
Q Consensus       103 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr  180 (573)
                      +++.+|+ .+++||+++..  ++.|++++.+. |+.+.++|+++++|+|..+++.|+.++|.+++++|+||||||++.||
T Consensus       111 ~d~~vq~Dik~~Pfkvv~k--~~kp~i~v~v~~g~~K~FtPeEiSaMiL~KMKe~AEayLGkkv~~AVvTvPAYFNDAQr  188 (663)
T KOG0100|consen  111 NDKSVQKDIKFLPFKVVNK--DGKPYIQVKVGGGETKVFTPEEISAMILTKMKETAEAYLGKKVTHAVVTVPAYFNDAQR  188 (663)
T ss_pred             CChhhhhhhhcCceEEEcC--CCCccEEEEccCCcccccCHHHHHHHHHHHHHHHHHHHhCCcccceEEecchhcchHHH
Confidence            9999999 99999999987  89999997666 67889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc-
Q 008233          181 TRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-  259 (573)
Q Consensus       181 ~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-  259 (573)
                      +++++|..+|||+++++|+||+|||++|++++...         .+++||||+||||||+|++.+.+|+|+|+++.|+. 
T Consensus       189 QATKDAGtIAgLnV~RIiNePTaAAIAYGLDKk~g---------EknilVfDLGGGTFDVSlLtIdnGVFeVlaTnGDTh  259 (663)
T KOG0100|consen  189 QATKDAGTIAGLNVVRIINEPTAAAIAYGLDKKDG---------EKNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTH  259 (663)
T ss_pred             hhhcccceeccceEEEeecCccHHHHHhcccccCC---------cceEEEEEcCCceEEEEEEEEcCceEEEEecCCCcc
Confidence            99999999999999999999999999999998764         79999999999999999999999999999999999 


Q ss_pred             cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-ecCCeeEEEEEcHHHHHHHHH
Q 008233          260 IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQ  338 (573)
Q Consensus       260 lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l~~g~d~~~~itr~~fe~l~~  338 (573)
                      |||.|||+++++|+.+.++++++.|++.+.+++++|+++||+||..||++.++.+.|+ +++|.||+-++||..||++..
T Consensus       260 LGGEDFD~rvm~~fiklykkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNm  339 (663)
T KOG0100|consen  260 LGGEDFDQRVMEYFIKLYKKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDGVDFSETLTRAKFEELNM  339 (663)
T ss_pred             cCccchHHHHHHHHHHHHhhhcCCccchhhHHHHHHHHHHHHHHhhhccccceEEeeeeccccccccchhhhhHHHHhhh
Confidence            9999999999999999999999999999999999999999999999999999999999 999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhcCCCCCC
Q 008233          339 KVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPF  418 (573)
Q Consensus       339 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~~~~~~~  418 (573)
                      ++|++...+++++|+++++.+.+|+.|+||||++|||.||++|+++|.+++....+||+||||+|||.+|..+++.   .
T Consensus       340 DLFr~TlkPv~kvl~Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsGe---e  416 (663)
T KOG0100|consen  340 DLFRKTLKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSGE---E  416 (663)
T ss_pred             HHHHHhhHHHHHHHhhcCcccccCceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhcccccc---c
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999997   4


Q ss_pred             CCCceEEeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEEEeCCCC
Q 008233          419 GNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPP  498 (573)
Q Consensus       419 ~~~~~~~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~i~~~~~  498 (573)
                      ...++++.|+.|.++||++-+|.|..|||||+.||++++..|++..|+|..+.|.+|||++++..+|++||.|.++++||
T Consensus       417 ~t~divLLDv~pLtlGIETvGGVMTklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipP  496 (663)
T KOG0100|consen  417 DTGDIVLLDVNPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPP  496 (663)
T ss_pred             CcCcEEEEeeccccceeeeecceeeccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCC
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCEEEEEEEEcCCccEEEEEEEcCCCCCCCcccceeeecccccCCccchHHHHHHH
Q 008233          499 SPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPVIPVMEVRLPTVDDGHGWCAEALNRA  558 (573)
Q Consensus       499 ~~~g~~~i~v~~~id~~g~l~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  558 (573)
                      +|+|.|+|+|+|++|.||+|+|+|.++.+|+..++.        |++|.-+++.|++.++
T Consensus       497 APRGvpqIEVtFevDangiL~VsAeDKgtg~~~kit--------ItNd~~rLt~EdIerM  548 (663)
T KOG0100|consen  497 APRGVPQIEVTFEVDANGILQVSAEDKGTGKKEKIT--------ITNDKGRLTPEDIERM  548 (663)
T ss_pred             CCCCCccEEEEEEEccCceEEEEeeccCCCCcceEE--------EecCCCCCCHHHHHHH
Confidence            999999999999999999999999999999886633        4555555555555543

>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>PTZ00009 heat shock 70 kDa protein; Provisional Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11678 putative chaperone; Provisional Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>PRK13917 plasmid segregation protein ParM; Provisional Back     alignment and domain information
>PTZ00280 Actin-related protein 3; Provisional Back     alignment and domain information
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03739 PRTRC_D PRTRC system protein D Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>PTZ00452 actin; Provisional Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA [] Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>KOG0679 consensus Actin-related protein - Arp4p/Act3p [Cytoskeleton] Back     alignment and domain information
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional Back     alignment and domain information
>COG5277 Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function Back     alignment and domain information
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] Back     alignment and domain information
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown] Back     alignment and domain information
>KOG0676 consensus Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A Back     alignment and domain information
>KOG0797 consensus Actin-related protein [Cytoskeleton] Back     alignment and domain information
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon Back     alignment and domain information
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>KOG0680 consensus Actin-related protein - Arp6p [Cytoskeleton] Back     alignment and domain information
>KOG0677 consensus Actin-related protein Arp2/3 complex, subunit Arp2 [Cytoskeleton] Back     alignment and domain information
>PRK15027 xylulokinase; Provisional Back     alignment and domain information
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X Back     alignment and domain information
>PLN02669 xylulokinase Back     alignment and domain information
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3 Back     alignment and domain information
>PRK10854 exopolyphosphatase; Provisional Back     alignment and domain information
>TIGR01312 XylB D-xylulose kinase Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>PRK04123 ribulokinase; Provisional Back     alignment and domain information
>TIGR01234 L-ribulokinase L-ribulokinase Back     alignment and domain information
>TIGR01311 glycerol_kin glycerol kinase Back     alignment and domain information
>PTZ00294 glycerol kinase-like protein; Provisional Back     alignment and domain information
>PRK10331 L-fuculokinase; Provisional Back     alignment and domain information
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type Back     alignment and domain information
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02295 glycerol kinase Back     alignment and domain information
>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02627 rhamnulo_kin rhamnulokinase Back     alignment and domain information
>COG1069 AraB Ribulose kinase [Energy production and conversion] Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 Back     alignment and domain information
>smart00842 FtsA Cell division protein FtsA Back     alignment and domain information
>PRK10640 rhaB rhamnulokinase; Provisional Back     alignment and domain information
>PRK14878 UGMP family protein; Provisional Back     alignment and domain information
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional Back     alignment and domain information
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PF13941 MutL: MutL protein Back     alignment and domain information
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03706 exo_poly_only exopolyphosphatase Back     alignment and domain information
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) Back     alignment and domain information
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>PLN02666 5-oxoprolinase Back     alignment and domain information
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length Back     alignment and domain information
>PRK09604 UGMP family protein; Validated Back     alignment and domain information
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P Back     alignment and domain information
>PRK09698 D-allose kinase; Provisional Back     alignment and domain information
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1385 consensus Nucleoside phosphatase [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12 Back     alignment and domain information
>PLN02920 pantothenate kinase 1 Back     alignment and domain information
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed Back     alignment and domain information
>PRK00976 hypothetical protein; Provisional Back     alignment and domain information
>COG3426 Butyrate kinase [Energy production and conversion] Back     alignment and domain information
>COG0554 GlpK Glycerol kinase [Energy production and conversion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query573
1yuw_A554 Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214 1e-81
2v7z_A543 Crystal Structure Of The 70-Kda Heat Shock Cognate 6e-81
3c7n_B554 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 8e-81
2v7y_A509 Crystal Structure Of The Molecular Chaperone Dnak F 2e-60
2kho_A605 Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP 3e-53
1ngf_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 3e-52
1ba1_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 6e-52
1hpm_A386 How Potassium Affects The Activity Of The Molecular 1e-51
1atr_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 1e-51
1ats_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 1e-51
2qw9_B394 Crystal Structure Of Bovine Hsc70 (1-394aa)in The A 1e-51
1nge_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-51
1bup_A386 T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot 2e-51
1ngb_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 2e-51
4b9q_A605 Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L 2e-51
1ngd_A386 Structural Basis Of The 70-kilodalton Heat Shock Co 4e-51
1ngh_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 4e-51
1nga_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 5e-51
1hx1_A400 Crystal Structure Of A Bag Domain In Complex With T 5e-51
3fzf_A381 Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP 6e-51
1ngg_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 7e-51
1ngc_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 7e-51
3cqx_A386 Chaperone Complex Length = 386 8e-51
1ba0_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 8e-51
3gdq_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-50
1kaz_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71e 2e-50
2qwn_A394 Crystal Structure Of Disulfide-Bond-Crosslinked Com 2e-50
1kay_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71a 3e-50
2bup_A381 T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 3e-50
3fe1_A403 Crystal Structure Of The Human 70kda Heat Shock Pro 3e-50
1kax_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71m 3e-50
1qqo_A378 E175s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 8e-50
1s3x_A382 The Crystal Structure Of The Human Hsp70 Atpase Dom 1e-49
1qqm_A378 D199s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-49
1hjo_A380 Atpase Domain Of Human Heat Shock 70kda Protein 1 L 1e-49
3jxu_A409 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-49
3a8y_A392 Crystal Structure Of The Complex Between The Bag5 B 1e-49
2e8a_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 2e-49
2e88_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 2e-49
3d2f_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 2e-49
3gl1_A387 Crystal Structure Of Atpase Domain Of Ssb1 Chaperon 3e-49
3d2e_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70, 3e-49
1qqn_A378 D206s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 3e-48
3qfp_A390 Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE D 1e-47
3qfu_A394 Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXE 1e-47
3iuc_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 2e-47
3i33_A404 Crystal Structure Of The Human 70kda Heat Shock Pro 3e-47
3ldl_A384 Crystal Structure Of Human Grp78 (70kda Heat Shock 5e-47
4fsv_A387 Crystal Structure Of A Heat Shock 70kda Protein 2 ( 4e-45
3kvg_A400 Crystal Structure Of The N-Terminal Domain Of Hsp70 2e-42
1dkg_D383 Crystal Structure Of The Nucleotide Exchange Factor 7e-30
1ckr_A159 High Resolution Solution Structure Of The Heat Shoc 3e-23
3n8e_A182 Substrate Binding Domain Of The Human Heat Shock 70 4e-21
3h0x_A152 Crystal Structure Of Peptide-Binding Domain Of Kar2 7e-20
3dqg_A151 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 9e-20
1xqs_C191 Crystal Structure Of The Hspbp1 Core Domain Complex 4e-19
2op6_A152 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 4e-19
1bpr_A191 Nmr Structure Of The Substrate Binding Domain Of Dn 5e-19
3dpo_A219 Crystal Structure Of The Substrate Binding Domain O 9e-19
1dkx_A219 The Substrate Binding Domain Of Dnak In Complex Wit 9e-19
1dky_A219 The Substrate Binding Domain Of Dnak In Complex Wit 1e-18
1q5l_A135 Nmr Structure Of The Substrate Binding Domain Of Dn 6e-18
3dob_A152 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 8e-18
1dg4_A115 Nmr Structure Of The Substrate Binding Domain Of Dn 1e-17
4gni_A409 Structure Of The Ssz1 Atpase Bound To Atp And Magne 4e-16
3c7n_A 668 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 5e-15
2qxl_A 658 Crystal Structure Analysis Of Sse1, A Yeast Hsp110 6e-15
3d2e_A 675 Crystal Structure Of A Complex Of Sse1p And Hsp70, 7e-15
3d2f_A 675 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 1e-14
1u00_A227 Hsca Substrate Binding Domain Complexed With The Is 1e-11
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554 Back     alignment and structure 
Iteration: 1

 Score =  300 bits (769), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 179/497 (36%), Positives = 275/497 (55%), Gaps = 18/497 (3%)
Query: 28  AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLS 87
           A+GID+GT+   +  +   +VE+I N +  +   SYV F D     G + +  ++  M  
Sbjct: 6   AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVAMNP 63
Query: 88  GAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLA 146
              +F+ KRLIGR   D VV +  K  PF+V  V+   RP +        +S  PEEV +
Sbjct: 64  TNTVFDAKRLIGRRFDDAVVQSDMKHWPFMV--VNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 147 IFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVAL 206
           + L +++ +AE  L + + N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 207 LYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDL 265
            Y              G+E+  +IF++G G  DV++   A G+ ++K+ +G   +GGED 
Sbjct: 182 AYGLDKKV--------GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDF 233
Query: 266 LQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGNGLKV 324
              M+ H +   +           +++  LR A + A   LSS T   I +D L  G+  
Sbjct: 234 DNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDF 293
Query: 325 SKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQST 384
             ++TR  FEE+N  +F      + + L DAK++   ++D++LVGG + IPK++ L+Q  
Sbjct: 294 YTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDF 353
Query: 385 CKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFV 443
               EL + INP EA   GAA++ A+ SG  D   N+ DLL + VTPL +GI   G    
Sbjct: 354 FNGKELNKSINPDEAVAYGAAVQAAILSG--DKSENVQDLLLLDVTPLSLGIETAGGVMT 411
Query: 444 PIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGV 503
            +I RNTT+P ++   FTT  DNQ   LI VYEGE    ++N+LLG F++TGIPP+P+GV
Sbjct: 412 VLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGV 471
Query: 504 PEINVCMDIDASSVLRV 520
           P+I V  DIDA+ +L V
Sbjct: 472 PQIEVTFDIDANGILNV 488
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543 Back     alignment and structure
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554 Back     alignment and structure
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis State Length = 509 Back     alignment and structure
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605 Back     alignment and structure
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386 Back     alignment and structure
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386 Back     alignment and structure
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo State Length = 394 Back     alignment and structure
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386 Back     alignment and structure
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605 Back     alignment and structure
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The Hsc70 Atpase Domain Length = 400 Back     alignment and structure
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP Length = 381 Back     alignment and structure
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|3CQX|A Chain A, Chaperone Complex Length = 386 Back     alignment and structure
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386 Back     alignment and structure
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1-Like Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 408 Back     alignment and structure
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant Length = 381 Back     alignment and structure
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394 Back     alignment and structure
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant Length = 381 Back     alignment and structure
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 Length = 381 Back     alignment and structure
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6 (Hsp70b') Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 403 Back     alignment and structure
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant Length = 381 Back     alignment and structure
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain Length = 382 Back     alignment and structure
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1 Length = 380 Back     alignment and structure
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409 Back     alignment and structure
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392 Back     alignment and structure
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391 Back     alignment and structure
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391 Back     alignment and structure
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 382 Back     alignment and structure
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A Member Of The Hsp70 Family, From Saccharomyces Cerevisiae Length = 387 Back     alignment and structure
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 382 Back     alignment and structure
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN Length = 390 Back     alignment and structure
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP Length = 408 Back     alignment and structure
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2 (Hsp70-2) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 404 Back     alignment and structure
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5 BIP) Atpase Domain In Complex With Atp Length = 384 Back     alignment and structure
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387 Back     alignment and structure
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 (Cgd2_20) From Cryptosporidium Parvum In Complex With Amppnp Length = 400 Back     alignment and structure
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383 Back     alignment and structure
>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock Cognate-70 Kd Substrate Binding Domain Obtained By Multidimensional Nmr Techniques Length = 159 Back     alignment and structure
>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda Prote (Mortalin) Length = 182 Back     alignment and structure
>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2 Protein From Saccharomyces Cerevisiae Length = 152 Back     alignment and structure
>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F, Mitochondrial Precursor, From Caenorhabditis Elegans. Length = 151 Back     alignment and structure
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With The Fragment Of Hsp70 Atpase Domain Length = 191 Back     alignment and structure
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D Precursor From C.Elegans Length = 152 Back     alignment and structure
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, Minimized Average Structure Length = 191 Back     alignment and structure
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E. Coli Dnak In Complex With A Short Pyrrhocoricin-Derived Inhibitor Peptide Length = 219 Back     alignment and structure
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 1 Selenomethionyl Crystals Length = 219 Back     alignment and structure
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 2 Native Crystals Length = 219 Back     alignment and structure
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak Bound To The Peptide Nrllltg Length = 135 Back     alignment and structure
>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F44e5.5 From C.Elegans. Length = 152 Back     alignment and structure
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In The Apo Form Length = 115 Back     alignment and structure
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium Length = 409 Back     alignment and structure
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668 Back     alignment and structure
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658 Back     alignment and structure
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 675 Back     alignment and structure
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 675 Back     alignment and structure
>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu Recognition Peptide Elppvkihc Length = 227 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query573
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 1e-109
3d2f_A 675 Heat shock protein homolog SSE1; nucleotide exchan 1e-103
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 6e-80
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 1e-78
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 3e-68
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 9e-65
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 5e-43
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 4e-32
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 7e-32
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 1e-31
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 8e-30
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 1e-29
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 4e-28
4e81_A219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 9e-27
1u00_A227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 3e-25
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-11
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 4e-10
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Length = 554 Back     alignment and structure
 Score =  336 bits (865), Expect = e-109
 Identities = 186/515 (36%), Positives = 280/515 (54%), Gaps = 54/515 (10%)

Query: 28  AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLS 87
           A+GID+GT+   +  +   +VE+I N +  +   SYV F D               E L 
Sbjct: 6   AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT--------------ERLI 51

Query: 88  GAA------------IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNN 134
           G A            +F+ KRLIGR   D VV +  K  PF+V  V+   RP +      
Sbjct: 52  GDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMV--VNDAGRPKVQVEYKG 109

Query: 135 AWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSF--SRFQLTRIERACAMAGL 192
             +S  PEEV ++ L +++ +AE  L + + N V+T+P  F  S+ Q T+   A  +AGL
Sbjct: 110 ETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATK--DAGTIAGL 167

Query: 193 HVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQI 252
           +VLR++ EPTA A+ Y   ++         G+E+  +IF++G G  DV++   A G+ ++
Sbjct: 168 NVLRIINEPTAAAIAYGLDKK--------VGAERNVLIFDLGGGTFDVSILTIAAGIFEV 219

Query: 253 KALSG-SAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKS--MAL--LRVATQDAIHKLS 307
           K+ +G + +GGED    M+ H +    + F      +I     A+  LR A + A   LS
Sbjct: 220 KSTAGDTHLGGEDFDNRMVNHFI----AEFKRKHKKDISENKRAVRRLRTACERAKRTLS 275

Query: 308 SETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVI 366
           S T   I +D L  G+    ++TR  FEE+N  +F      + + L DAK++   ++D++
Sbjct: 276 SSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIV 335

Query: 367 LVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLT 425
           LVGG + IPK++ L+Q      EL + INP EA   GAA++ A+ SG  D   N+ DLL 
Sbjct: 336 LVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSG--DKSENVQDLLL 393

Query: 426 IQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEEN 485
           + VTPL +GI   G     +I RNTT+P ++   FTT  DNQ   LI VYEGE    ++N
Sbjct: 394 LDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDN 453

Query: 486 HLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 520
           +LLG F++TGIPP+P+GVP+I V  DIDA+ +L V
Sbjct: 454 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 488
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Length = 675 Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Length = 605 Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Length = 509 Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404 Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Length = 383 Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Length = 152 Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Length = 152 Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Length = 152 Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Length = 182 Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Length = 135 Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Length = 151 Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Length = 219 Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Length = 227 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Length = 320 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query573
4b9q_A605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 100.0
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 100.0
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 100.0
3d2f_A 675 Heat shock protein homolog SSE1; nucleotide exchan 100.0
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 100.0
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 100.0
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 100.0
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 100.0
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 100.0
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 100.0
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 99.95
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 99.95
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 99.95
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 99.94
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 99.93
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 99.93
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 99.9
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 99.88
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 99.88
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 99.88
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 99.86
4e81_A219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 99.85
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 99.85
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 99.83
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 99.79
1u00_A227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 99.79
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 99.78
3js6_A355 Uncharacterized PARM protein; partition, segregati 99.74
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 99.6
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 99.53
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 99.5
4fo0_A593 Actin-related protein 8; chromatin remodeling, nuc 99.14
2d0o_A610 DIOL dehydratase-reactivating factor large subunit 99.07
1nbw_A607 Glycerol dehydratase reactivase alpha subunit; mol 99.05
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 98.76
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 98.23
4am6_A655 Actin-like protein ARP8; nuclear protein, chromati 97.86
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 97.23
3mdq_A315 Exopolyphosphatase; structural genomics, joint cen 97.11
1t6c_A315 Exopolyphosphatase; alpha/beta protein, actin-like 96.87
3vgl_A321 Glucokinase; ROK family, transferase; HET: BGC ANP 96.63
2ivn_A330 O-sialoglycoprotein endopeptidase; UP1 keops compl 96.42
3r8e_A321 Hypothetical sugar kinase; ribonuclease H-like mot 96.07
2qm1_A326 Glucokinase; alpha-beta structure, putative helix- 96.04
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 96.01
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 95.94
3eno_A334 Putative O-sialoglycoprotein endopeptidase; hydrol 95.89
2zf5_O497 Glycerol kinase; hyperthermophilic archaeon, ATP-b 95.86
4bc3_A538 Xylulose kinase; transferase, glucuronate xyluloki 95.78
3hz6_A511 Xylulokinase; xylulose, structural genomic, chromo 95.6
4db3_A327 Glcnac kinase, N-acetyl-D-glucosamine kinase; stru 95.47
3ll3_A504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 95.44
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 95.42
2ch5_A347 NAGK protein; transferase, N-acetylglucosamine, gl 95.23
3g25_A501 Glycerol kinase; IDP00743, ATP-binding, glycerol m 95.1
2dpn_A495 Glycerol kinase; thermus thermophilus HB8, structu 95.07
3vov_A302 Glucokinase, hexokinase; ROK, sugar kinase, transf 95.03
1u6z_A513 Exopolyphosphatase; alpha/beta protein, askha (ace 95.01
3ezw_A526 Glycerol kinase; glycerol metabolism, allosteric r 94.99
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 94.98
2p3r_A510 Glycerol kinase; glycerol metabolism, allosteric r 94.92
3jvp_A572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 94.83
3h3n_X506 Glycerol kinase; ATP-binding, glycerol metabolism, 94.79
4e1j_A520 Glycerol kinase; structural genomics, PSI-biology, 94.74
3en9_A540 Glycoprotease, O-sialoglycoprotein endopeptidase/p 94.49
2d4w_A504 Glycerol kinase; alpha and beta protein, ribonucle 94.32
2w40_A503 Glycerol kinase, putative; closed conformation, ma 94.16
1z6r_A406 MLC protein; transcriptional repressor, ROK family 94.1
2uyt_A489 Rhamnulokinase; rhamnose degradation, IN-LINE phos 93.95
1z05_A429 Transcriptional regulator, ROK family; structural 92.93
2ap1_A327 Putative regulator protein; zinc binding protein, 92.92
3cer_A343 Possible exopolyphosphatase-like protein; NESG, BL 92.62
3bex_A249 Type III pantothenate kinase; actin-like fold, ATP 92.45
3h6e_A482 Carbohydrate kinase, FGGY; novosphingobium aromati 91.4
3hi0_A508 Putative exopolyphosphatase; 17739545, structural 90.48
3o8m_A485 Hexokinase; rnaseh-like fold, glycolysis, glucose 87.03
3qbx_A371 Anhydro-N-acetylmuramic acid kinase; acetate and s 86.04
2yhx_A457 Hexokinase B; transferase(phosphoryl,alcohol accep 83.41
3cqy_A370 Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1 82.15
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
Probab=100.00  E-value=1.9e-90  Score=763.21  Aligned_cols=485  Identities=29%  Similarity=0.480  Sum_probs=459.3

Q ss_pred             CeEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEe-CCceEEcCChHHHhhh-ccCccchhhHhhHhcCCCCC
Q 008233           26 EIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFK-DEVPAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRVDT  103 (573)
Q Consensus        26 ~~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~-~~~~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~~~  103 (573)
                      ..+||||||||||+||++.+|.++++.|.+|++.+||+|+|. ++++++|   ..|+.+ ..+|.++++++|||+|+.++
T Consensus         2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG---~~A~~~~~~~p~~ti~~~KrllG~~~~   78 (605)
T 4b9q_A            2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVG---QPAKRQAVTNPQNTLFAIKRLIGRRFQ   78 (605)
T ss_dssp             CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEES---HHHHHTTTTCGGGEECCGGGTTTCBTT
T ss_pred             CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEec---HHHHHHHHhCCCcEehhhHHhhCCCCC
Confidence            469999999999999999999999999999999999999996 5689999   999999 99999999999999999999


Q ss_pred             Chhhhh-cCCCCeeEEEeeCCCccEEEEEecCceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHH
Q 008233          104 DPVVHA-SKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTR  182 (573)
Q Consensus       104 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~  182 (573)
                      ++.++. .+.+||+++.. .++.+.+.  ++|.  .++|+++++++|++|++.|+.+++.++.++|||||++|++.||++
T Consensus        79 d~~v~~~~~~~p~~~~~~-~~g~~~~~--~~~~--~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a  153 (605)
T 4b9q_A           79 DEEVQRDVSIMPFKIIAA-DNGDAWVE--VKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQA  153 (605)
T ss_dssp             SHHHHHHHTTCSSEEEEC-TTSBEEEE--ETTE--EECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHH
T ss_pred             CHHHHHHhhcCCeEEEEc-CCCceEEE--ECCE--EECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence            999999 89999999887 67888887  7765  499999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeC----CeEEEEEeecc
Q 008233          183 IERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAG----GVSQIKALSGS  258 (573)
Q Consensus       183 l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~----~~~~v~~~~g~  258 (573)
                      +++|++.|||+++++++||+|||++|+.....         .+.++||||+||||||+|++++.+    +.++++++.|+
T Consensus       154 ~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~---------~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd  224 (605)
T 4b9q_A          154 TKDAGRIAGLEVKRIINEPTAAALAYGLDKGT---------GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGD  224 (605)
T ss_dssp             HHHHHHHTTCEEEEEEEHHHHHHHHHHTTSCC---------SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEE
T ss_pred             HHHHHHHcCCceEEEeCcHHHHHHHhhhhccC---------CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCC
Confidence            99999999999999999999999999877643         268999999999999999999988    89999999999


Q ss_pred             c-cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-ecC----CeeEEEEEcHHH
Q 008233          259 A-IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGN----GLKVSKNVTREE  332 (573)
Q Consensus       259 ~-lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l~~----g~d~~~~itr~~  332 (573)
                      . +||++||++|++|+.++|+++++.++..+++.+.+|+.+||++|+.||...++.+.++ +..    +.++.++|||++
T Consensus       225 ~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~  304 (605)
T 4b9q_A          225 THLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK  304 (605)
T ss_dssp             TTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHH
T ss_pred             CCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHH
Confidence            9 9999999999999999999999988889999999999999999999999999999888 433    367899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhc
Q 008233          333 FEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTS  412 (573)
Q Consensus       333 fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~  412 (573)
                      |+++++|+++++..+++++|+++++...+|+.|+||||+|++|+|++.|++.| +.++....||++|||+|||++|+.++
T Consensus       305 ~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~  383 (605)
T 4b9q_A          305 LESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT  383 (605)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999 78888899999999999999999998


Q ss_pred             CCCCCCCCCceEEeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEE
Q 008233          413 GINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFK  492 (573)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~  492 (573)
                      +.     .+++.+.|++|++||+++.+|.+.+||++|++||++++..|++..|+|+.+.|.+|||++..+.+|..||+|.
T Consensus       384 ~~-----~~~~~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~  458 (605)
T 4b9q_A          384 GD-----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFN  458 (605)
T ss_dssp             TS-----SCSEEEECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEE
T ss_pred             CC-----CCceEEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEE
Confidence            84     4689999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCCCCCCCCEEEEEEEEcCCccEEEEEEEcCCCCCCCc
Q 008233          493 ITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPV  533 (573)
Q Consensus       493 i~~~~~~~~g~~~i~v~~~id~~g~l~v~~~~~~~g~~~~~  533 (573)
                      +.++||.+.|.++|+|+|++|.||+|+|++.++.+|++.++
T Consensus       459 l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i  499 (605)
T 4b9q_A          459 LDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKI  499 (605)
T ss_dssp             EECCCCCSTTCCCEEEEEEECTTSCEEEEEEETTTCCEECC
T ss_pred             EeCCCCCcCCCceEEEEEEEcCCcEEEEEEEecCCCcEEEE
Confidence            99999999999999999999999999999999999988663
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} Back     alignment and structure
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A Back     alignment and structure
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Back     alignment and structure
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Back     alignment and structure
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* Back     alignment and structure
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* Back     alignment and structure
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} Back     alignment and structure
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} Back     alignment and structure
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Back     alignment and structure
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} Back     alignment and structure
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Back     alignment and structure
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Back     alignment and structure
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Back     alignment and structure
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} Back     alignment and structure
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Back     alignment and structure
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Back     alignment and structure
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Back     alignment and structure
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A Back     alignment and structure
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Back     alignment and structure
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Back     alignment and structure
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} Back     alignment and structure
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* Back     alignment and structure
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A* Back     alignment and structure
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A Back     alignment and structure
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 573
d1bupa2193 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATP 3e-37
d1dkgd2198 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATP 2e-35
d1bupa1185 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPas 4e-34
d1dkgd1183 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPas 4e-33
d1yuwa1159 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus 1e-27
d1dkza2118 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxI 4e-23
d1u00a2115 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc6 4e-22
d1jcea2196 c.55.1.1 (A:141-336) Prokaryotic actin homolog Mre 2e-10
d1jcea1137 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB 5e-10
d2zgya2163 c.55.1.1 (A:158-320) Plasmid segregation protein P 4e-08
d2fsja1161 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 5e-04
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 193 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  134 bits (338), Expect = 3e-37
 Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 2/192 (1%)

Query: 223 GSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGEDLLQNMMRHLMPNSESLF 281
           G+E+  +IF++G G  DV++     G+ ++K+ +G + +GGED    M+ H +   +   
Sbjct: 2   GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 61

Query: 282 SSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKV 340
                   +++  LR A + A   LSS T   I +D L  G+    ++TR  FEE+N  +
Sbjct: 62  KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 121

Query: 341 FEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAA 400
           F      + + L DAK++   ++D++LVGG + IPK++ L+Q      EL + INP EA 
Sbjct: 122 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 181

Query: 401 VSGAALEGAVTS 412
             GAA++ A+ S
Sbjct: 182 AYGAAVQAAILS 193
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 198 Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 185 Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 183 Back     information, alignment and structure
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 159 Back     information, alignment and structure
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Length = 118 Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 196 Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 137 Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Length = 163 Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 161 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query573
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1bupa1185 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1dkgd1183 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1yuwa1159 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 99.91
d1dkza2118 DnaK {Escherichia coli [TaxId: 562]} 99.9
d1u00a2115 Chaperone protein hscA (Hsc66) {Escherichia coli [ 99.88
d1jcea1137 Prokaryotic actin homolog MreB {Thermotoga maritim 99.87
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 99.86
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 99.58
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 99.4
d2fsja1161 Hypothetical protein Ta0583 {Archaeon Thermoplasma 99.36
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 98.7
d1k8ka2258 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 97.95
d2fxua2225 Actin {Cow (Bos taurus) [TaxId: 9913]} 97.83
d1nbwa3202 ATPase domain of the glycerol dehydratase reactiva 97.52
d2d0oa3203 Diol dehydratase-reactivating factor large subunit 97.42
d1k8kb1190 Actin-related protein 2, Arp2 {Cow (Bos taurus) [T 97.4
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 96.05
d2fxua1140 Actin {Cow (Bos taurus) [TaxId: 9913]} 95.81
d1r59o2235 Glycerol kinase {Enterococcus casseliflavus [TaxId 95.79
d1k8ka1158 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 95.67
d2p3ra2247 Glycerol kinase {Escherichia coli [TaxId: 562]} 95.54
d1e4ft1193 Cell division protein FtsA {Thermotoga maritima [T 94.04
d2fsja2164 Hypothetical protein Ta0583 {Archaeon Thermoplasma 93.13
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 93.02
d1t6ca2180 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 91.14
d1u6za3177 Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 89.74
d1zc6a1114 Probable N-acetylglucosamine kinase CV2896 {Chromo 89.41
d2zgya1157 Plasmid segregation protein ParM {Escherichia coli 87.59
d2aa4a2170 N-acetylmannosamine kinase NanK {Escherichia coli 83.21
d2hoea2169 N-acetylglucosamine kinase {Thermotoga maritima [T 82.99
d1z05a2197 Transcriptional regulator VC2007 {Vibrio cholerae 81.4
d2p3ra1252 Glycerol kinase {Escherichia coli [TaxId: 562]} 81.35
d2ap1a1186 Putative regulator protein YcfX {Salmonella typhim 80.59
d2ch5a2117 N-acetylglucosamine kinase, NAGK {Human (Homo sapi 80.36
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=7.6e-40  Score=306.81  Aligned_cols=189  Identities=32%  Similarity=0.541  Sum_probs=182.3

Q ss_pred             CccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc-cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHh
Q 008233          224 SEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDA  302 (573)
Q Consensus       224 ~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~  302 (573)
                      .+++||||||||||+|+|++++.++.++++++.|+. +||++||++|++|+.++|.++++.++..+++.+.+|+.+||++
T Consensus         3 ~e~~VlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~   82 (193)
T d1bupa2           3 AERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERA   82 (193)
T ss_dssp             SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEEeCCCeEEEEEEEEeCCEEEEEEecCCCCcchhHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999998 9999999999999999999999989999999999999999999


Q ss_pred             hhhcCCCceEEEEEE-ecCCeeEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHH
Q 008233          303 IHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLV  381 (573)
Q Consensus       303 K~~LS~~~~~~i~i~-l~~g~d~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l  381 (573)
                      |+.||.+.++.+.++ +..+.++.++|||++|+++++|+++++.++++++|+++++.+.+|+.|+|+||+|++|+|++.|
T Consensus        83 K~~ls~~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~~~i  162 (193)
T d1bupa2          83 KRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLL  162 (193)
T ss_dssp             HHHHTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHH
T ss_pred             hhccCCCceEEEEEecccCCCccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHH
Confidence            999999999999999 8899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHcCCccccCCCCCccceehhHHHHhHHhc
Q 008233          382 QSTCKKVELYEGINPLEAAVSGAALEGAVTS  412 (573)
Q Consensus       382 ~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~  412 (573)
                      +++|++.++..+.||++|||+|||++|+.++
T Consensus       163 ~~~f~~~~i~~~~~p~~aVa~GaA~~aa~ls  193 (193)
T d1bupa2         163 QDFFNGKELNKSINPDEAVAYGAAVQAAILS  193 (193)
T ss_dssp             HHHTTTCCCBCSSCGGGHHHHHHHHHHHHHC
T ss_pred             HHHcCCCCCCCCCChHHHHHHHHHHHHHhhC
Confidence            9999888888899999999999999999875
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]} Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fsja2 c.55.1.12 (A:1-164) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Back     information, alignment and structure
>d2zgya1 c.55.1.1 (A:1-157) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure