Citrus Sinensis ID: 008274
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 571 | 2.2.26 [Sep-21-2011] | |||||||
| Q80YA7 | 892 | Dipeptidyl peptidase 8 OS | yes | no | 0.943 | 0.604 | 0.326 | 9e-74 | |
| Q6V1X1 | 898 | Dipeptidyl peptidase 8 OS | yes | no | 0.915 | 0.582 | 0.32 | 8e-72 | |
| Q86TI2 | 863 | Dipeptidyl peptidase 9 OS | no | no | 0.968 | 0.640 | 0.313 | 2e-70 | |
| Q8BVG4 | 862 | Dipeptidyl peptidase 9 OS | no | no | 0.973 | 0.645 | 0.312 | 4e-70 | |
| B2RJX3 | 732 | Prolyl tripeptidyl peptid | yes | no | 0.917 | 0.715 | 0.295 | 1e-61 | |
| Q7MUW6 | 732 | Prolyl tripeptidyl peptid | yes | no | 0.917 | 0.715 | 0.295 | 1e-61 | |
| Q5AZ42 | 773 | Probable dipeptidyl pepti | yes | no | 0.935 | 0.690 | 0.267 | 1e-46 | |
| A1CHP1 | 768 | Probable dipeptidyl pepti | N/A | no | 0.929 | 0.691 | 0.254 | 2e-45 | |
| Q0CXB1 | 914 | Probable dipeptidyl-amino | N/A | no | 0.947 | 0.591 | 0.258 | 2e-44 | |
| Q12884 | 760 | Seprase OS=Homo sapiens G | no | no | 0.882 | 0.663 | 0.264 | 5e-44 |
| >sp|Q80YA7|DPP8_MOUSE Dipeptidyl peptidase 8 OS=Mus musculus GN=Dpp8 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 278 bits (711), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 212/649 (32%), Positives = 306/649 (47%), Gaps = 110/649 (16%)
Query: 9 QTHGLAEYIAQEEMDRKTGYWWSLDSKF---------IAFTQVDSSEIPRFRIMHQGKSS 59
++ G+A ++ QEE DR +GYWW ++ I + + D SE+ I+H
Sbjct: 258 RSAGVATFVLQEEFDRYSGYWWCPQAERTPSGGKILRILYEENDESEV---EIIHVTSPM 314
Query: 60 VGSEAQEDHAYPFAGASNVKVRLG----VVSAAGGPVSWMDLQCGGTDQNYDE--EYLAR 113
+ + + YP G +N KV VV AAGG + +D + + E EY+AR
Sbjct: 315 LETRRADSFRYPKTGTANPKVTFKMSEIVVDAAGGIIDVIDKELVQPFEILFEGVEYIAR 374
Query: 114 VNWM-HGNILTAQVLNRSQTKLKVLKF----------DIKTGQRKV-----------ILV 151
W G + +L+RSQT L+++ D QR + I
Sbjct: 375 AGWTPEGKHAWSILLDRSQTHLQIVLISPELFIPVEDDAMDRQRLIESVPDSVTPLIIYE 434
Query: 152 EELDSWVNLHDCFTPLDKGVTKYSGGFIWASE-KTGFRHLY----------LHDINGTCL 200
E D W+N+HD F + + FI+ASE KTGFRHLY +G
Sbjct: 435 ETTDIWINIHDIFHVFPQ-THEDEIEFIFASECKTGFRHLYKITSILKESKYKRSSGGLP 493
Query: 201 GP------------ITEGDWMVEQIVG----VNEASGQVYFTGTLDGPLESHLYCAKLYP 244
P IT G+W V G V+EA VYF GT D PLE HLY Y
Sbjct: 494 APSDFKCPIKEEITITSGEWEVLGRHGSNIWVDEARKLVYFEGTKDSPLEHHLYVTS-YA 552
Query: 245 DWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ----------- 293
+ V+LT+ H L + F+ + + +P + L L
Sbjct: 553 NPGEV----VRLTDRGYSHSCCLSRHCDFFISKYSNQKNPHCVSLYKLSSPEDDPVHKTK 608
Query: 294 -------DGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGP 346
D + LP Y PP+I ++ G LYG LYKP + + G
Sbjct: 609 EFWATILDSAGPLPDY--------------TPPEIFSFESTTGFTLYGMLYKPHDLQPG- 653
Query: 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406
Y T++ +YGGP VQLV + + R L S G +V +DNRG+ RGLKFE + K
Sbjct: 654 KKYPTVLFIYGGPQVQLVNNRFKGVKYFRLNTLASLGYVVVVIDNRGSCHRGLKFEGAFK 713
Query: 407 HNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGA 465
+ G+I+ +DQ+ G ++L Q + +G++GWSYGGYLS + L + D+F+ A++GA
Sbjct: 714 YKMGQIEIDDQVEGLQYLASQYDFIDLDRVGIHGWSYGGYLSLMALMQRSDIFRVAIAGA 773
Query: 466 PVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDENVHFR 522
PVT W YDT YTE+YMG P ++ GY SV K +LLL+HG +DENVHF
Sbjct: 774 PVTLWIFYDTGYTERYMGHPDQNEQGYYLGSVAMQAEKFPSEPNRLLLLHGFLDENVHFA 833
Query: 523 HTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
HT+ L++ LV A KPY++ I+P ERH R + E + +++ L
Sbjct: 834 HTSILLSFLVRAGKPYDLQIYPQERHSIRVPESGEHYELHLLHYLQENL 882
|
Dipeptidyl peptidase that cleaves off N-terminal dipeptides from proteins having a Pro or Ala residue at position 2. May play a role in T-cell activation and immune function. Mus musculus (taxid: 10090) EC: 3EC: .EC: 4EC: .EC: 1EC: 4EC: .EC: 5 |
| >sp|Q6V1X1|DPP8_HUMAN Dipeptidyl peptidase 8 OS=Homo sapiens GN=DPP8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 271 bits (694), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 200/625 (32%), Positives = 295/625 (47%), Gaps = 102/625 (16%)
Query: 9 QTHGLAEYIAQEEMDRKTGYWWSLDSKF---------IAFTQVDSSEIPRFRIMHQGKSS 59
++ G+A ++ QEE DR +GYWW ++ I + + D SE+ I+H
Sbjct: 264 RSAGVATFVLQEEFDRYSGYWWCPKAETTPSGGKILRILYEENDESEV---EIIHVTSPM 320
Query: 60 VGSEAQEDHAYPFAGASNVKVRLGV----VSAAGGPVSWMDLQCGGTDQNYDE--EYLAR 113
+ + + YP G +N KV + + A G + +D + + E EY+AR
Sbjct: 321 LETRRADSFRYPKTGTANPKVTFKMSEIMIDAEGRIIDVIDKELIQPFEILFEGVEYIAR 380
Query: 114 VNWM-HGNILTAQVLNRSQTKLKVLKF----------DIKTGQRKV-----------ILV 151
W G + +L+RSQT+L+++ D+ QR + I
Sbjct: 381 AGWTPEGKYAWSILLDRSQTRLQIVLISPELFIPVEDDVMERQRLIESVPDSVTPLIIYE 440
Query: 152 EELDSWVNLHDCFTPLDKGVTKYSGGFIWASE-KTGFRHLY----------LHDINGTCL 200
E D W+N+HD F + + FI+ASE KTGFRHLY +G
Sbjct: 441 ETTDIWINIHDIFHVFPQSHEE-EIEFIFASECKTGFRHLYKITSILKESKYKRSSGGLP 499
Query: 201 GP------------ITEGDWMV----EQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYP 244
P IT G+W V + V+E VYF GT D PLE HLY
Sbjct: 500 APSDFKCPIKEEIAITSGEWEVLGRHGSNIQVDEVRRLVYFEGTKDSPLEHHLYVVSYVN 559
Query: 245 DWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQ 304
T +LT+ H + + F+ + + +P + L L
Sbjct: 560 PGEVT-----RLTDRGYSHSCCISQHCDFFISKYSNQKNPHCVSLYKLS----------S 604
Query: 305 PLTVPRIKRLQL--------------EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYK 350
P P K + PP+I ++ G LYG LYKP + + G Y
Sbjct: 605 PEDDPTCKTKEFWATILDSAGPLPDYTPPEIFSFESTTGFTLYGMLYKPHDLQPGKK-YP 663
Query: 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCG 410
T++ +YGGP VQLV + + R L S G +V +DNRG+ RGLKFE + K+ G
Sbjct: 664 TVLFIYGGPQVQLVNNRFKGVKYFRLNTLASLGYVVVVIDNRGSCHRGLKFEGAFKYKMG 723
Query: 411 RIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS 469
+I+ +DQ+ G ++L + + +G++GWSYGGYLS + L + D+F+ A++GAPVT
Sbjct: 724 QIEIDDQVEGLQYLASRYDFIDLDRVGIHGWSYGGYLSLMALMQRSDIFRVAIAGAPVTL 783
Query: 470 WDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDENVHFRHTAR 526
W YDT YTE+YMG P ++ GY SV K +LLL+HG +DENVHF HT+
Sbjct: 784 WIFYDTGYTERYMGHPDQNEQGYYLGSVAMQAEKFPSEPNRLLLLHGFLDENVHFAHTSI 843
Query: 527 LINALVAARKPYEILIFPDERHMPR 551
L++ LV A KPY++ I+P ERH R
Sbjct: 844 LLSFLVRAGKPYDLQIYPQERHSIR 868
|
Dipeptidyl peptidase that cleaves off N-terminal dipeptides from proteins having a Pro or Ala residue at position 2. May play a role in T-cell activation and immune function. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 4 EC: . EC: 5 |
| >sp|Q86TI2|DPP9_HUMAN Dipeptidyl peptidase 9 OS=Homo sapiens GN=DPP9 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 200/637 (31%), Positives = 300/637 (47%), Gaps = 84/637 (13%)
Query: 9 QTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEI-------PRFRIMHQGKSSVG 61
++ G+A ++ QEE DR TGYWW + + + + I ++H ++
Sbjct: 237 KSAGVATFVIQEEFDRFTGYWWCPTASWEGSEGLKTLRILYEEVDESEVEVIHVPSPALE 296
Query: 62 SEAQEDHAYPFAGASNVKVRLGVVS----AAGGPVSWMDLQCGGTDQNY--DEEYLARVN 115
+ + YP G+ N K+ L + + G VS + + + EY+AR
Sbjct: 297 ERKTDSYRYPRTGSKNPKIALKLAEFQTDSQGKIVSTQEKELVQPFSSLFPKVEYIARAG 356
Query: 116 WMH-GNILTAQVLNRSQTKLKVL---------------------KFDIKTGQRKVILVEE 153
W G A L+R Q L+++ + + Q V+ E
Sbjct: 357 WTRDGKYAWAMFLDRPQQWLQLVLLPPALFIPSTENEEQRLASARAVPRNVQPYVVYEEV 416
Query: 154 LDSWVNLHDCFTPLDKGVTKYSGGFIWASE-KTGFRHLYLHDINGTCLG----------- 201
+ W+N+HD F P + + F+ A+E KTGF HLY G
Sbjct: 417 TNVWINVHDIFYPFPQSEGEDELCFLRANECKTGFCHLYKVTAVLKSQGYDWSEPFSPGE 476
Query: 202 -----PI------TEGDWMVEQIVG----VNEASGQVYFTGTLDGPLESHLYCAKLYPDW 246
PI T G+W V G VNE + VYF GT D PLE HLY
Sbjct: 477 DEFKCPIKEEIALTSGEWEVLARHGSKIWVNEETKLVYFQGTKDTPLEHHLYVV------ 530
Query: 247 NHTLEAP---VKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303
+ EA V+LT H + N FV + S+ +PP + + L G PL++
Sbjct: 531 --SYEAAGEIVRLTTPGFSHSCSMSQNFDMFVSHYSSVSTPPCVHVYKL-SGPDDDPLHK 587
Query: 304 QPLTVPRIKRLQLEPPD-----IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGG 358
QP + PPD I LYG +YKP + G + T++ VYGG
Sbjct: 588 QPRFWASMMEAASCPPDYVPPEIFHFHTRSDVRLYGMIYKPHALQPGKK-HPTVLFVYGG 646
Query: 359 PCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQL 418
P VQLV +S+ +R L S G V +D RG+ +RGL+FE ++K+ G+++ EDQ+
Sbjct: 647 PQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQV 706
Query: 419 TGAEWLI-KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477
G +++ K G + + ++GWSYGG+LS + L P VF+ A++GAPVT W YDT Y
Sbjct: 707 EGLQFVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGY 766
Query: 478 TEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDENVHFRHTARLINALVAA 534
TE+YM +P + GYE SV HV K+ +LL++HG +DENVHF HT L++ L+ A
Sbjct: 767 TERYMDVPENNQHGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRA 826
Query: 535 RKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
KPY++ I+P+ERH R + E + F++ L
Sbjct: 827 GKPYQLQIYPNERHSIRCPESGEHYEVTLLHFLQEYL 863
|
Dipeptidyl peptidase that cleaves off N-terminal dipeptides from proteins having a Pro or Ala residue at position 2. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 4 EC: . EC: 5 |
| >sp|Q8BVG4|DPP9_MOUSE Dipeptidyl peptidase 9 OS=Mus musculus GN=Dpp9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 266 bits (679), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 296/634 (46%), Gaps = 78/634 (12%)
Query: 9 QTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEI-------PRFRIMHQGKSSVG 61
++ G+A ++ QEE DR TG WW + + + + I ++H ++
Sbjct: 236 KSAGVATFVIQEEFDRFTGCWWCPTASWEGSEGLKTLRILYEEVDESEVEVIHVPSPALE 295
Query: 62 SEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT-DQNYDE-----EYLARVN 115
+ + YP G+ N K+ L + + C Q + EY+AR
Sbjct: 296 ERKTDSYRYPRTGSKNPKIALKLAELQTDHQGKIVSSCEKELVQPFSSLFPKVEYIARAG 355
Query: 116 WMH-GNILTAQVLNRSQTKLKVLKFDI---------------------KTGQRKVILVEE 153
W G A L+R Q +L+++ K Q VI E
Sbjct: 356 WTRDGKYAWAMFLDRPQQRLQLVLLPPALFIPAVESEAQRQAAARAVPKNVQPFVIYEEV 415
Query: 154 LDSWVNLHDCFTPLDKGVTKYSGGFIWASE-KTGFRHLY-------LHDINGT-CLGP-- 202
+ W+N+HD F P + + F+ A+E KTGF HLY D + T L P
Sbjct: 416 TNVWINVHDIFHPFPQAEGQQDFCFLRANECKTGFCHLYRVTVELKTKDYDWTEPLSPTE 475
Query: 203 ------------ITEGDWMVEQIVG----VNEASGQVYFTGTLDGPLESHLYCAKLYPDW 246
+T G+W V G VNE + VYF GT D PLE HLY
Sbjct: 476 DEFKCPIKEEVALTSGEWEVLSRHGSKIWVNEQTKLVYFQGTKDTPLEHHLYVVSY---- 531
Query: 247 NHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPL 306
+ V+LT H + + FV + S+ +PP + + L G PL++QP
Sbjct: 532 -ESAGEIVRLTTLGFSHSCSMSQSFDMFVSHYSSVSTPPCVHVYKL-SGPDDDPLHKQPR 589
Query: 307 TVPRIKRLQLEPPD-----IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCV 361
+ PPD I LYG +YKP + G + T++ VYGGP V
Sbjct: 590 FWASMMEAANCPPDYVPPEIFHFHTRADVQLYGMIYKPHTLQPGRK-HPTVLFVYGGPQV 648
Query: 362 QLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGA 421
QLV +S+ +R L S G V +D RG+ +RGL FE ++K+ G+++ EDQ+ G
Sbjct: 649 QLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLHFEGALKNQMGQVEIEDQVEGL 708
Query: 422 EWLI-KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEK 480
+++ K G + + ++GWSYGG+LS + L P VF+ A++GAPVT W YDT YTE+
Sbjct: 709 QYVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTER 768
Query: 481 YMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDENVHFRHTARLINALVAARKP 537
YM +P + GYE SV HV K+ +LL++HG +DENVHF HT L++ L+ A KP
Sbjct: 769 YMDVPENNQQGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKP 828
Query: 538 YEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
Y++ I+P+ERH R + E + F++ L
Sbjct: 829 YQLQIYPNERHSIRCRESGEHYEVTLLHFLQEHL 862
|
Dipeptidyl peptidase that cleaves off N-terminal dipeptides from proteins having a Pro or Ala residue at position 2. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 4 EC: . EC: 5 |
| >sp|B2RJX3|PTP_PORG3 Prolyl tripeptidyl peptidase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=ptpA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 264/561 (47%), Gaps = 37/561 (6%)
Query: 14 AEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFA 73
+ + Q E + G +WS +AF ++D S + I+ S+ YP A
Sbjct: 198 GQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL---YYPMA 254
Query: 74 GASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM-HGNILTAQVLNRSQT 132
G + V +G+ A G + LQ G E++L ++W NIL +NR+Q
Sbjct: 255 GTPSHHVTVGIYHLATGKTVY--LQTG----EPKEKFLTNLSWSPDENILYVAEVNRAQN 308
Query: 133 KLKVLKFDIKTGQ-RKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLY 191
+ KV +D +TG+ + + VE +V T L + FIW S + G+ HLY
Sbjct: 309 ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ----FIWQSRRDGWNHLY 364
Query: 192 LHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE 251
L+D G + +T+G+W V G + ++YF T PLE H YC +
Sbjct: 365 LYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK--- 421
Query: 252 APVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLT---V 308
LT G H L + +D S P ++ + ++ GS L + P T +
Sbjct: 422 ---DLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSYTLLEAKNPDTGYAM 478
Query: 309 PRIKRLQLEPPDIVQIQANDG-TVLYGALYKPDESRYGPPP-YKTLISVYGGPCVQLVCD 366
P I+ I A DG T LY L P + P Y ++ VYGGP QLV
Sbjct: 479 PEIR--------TGTIMAADGQTPLYYKLTMP--LHFDPAKKYPVIVYVYGGPHAQLVTK 528
Query: 367 SWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426
+W ++V Y+ KG V+ +D+RG+A RG FE I G+ + DQ+ G ++L
Sbjct: 529 TWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKS 588
Query: 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPS 486
Q IG++GWSYGG+++ + DVF+ V+G PV W+ Y+ Y E+Y P
Sbjct: 589 QSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYEIMYGERYFDAPQ 648
Query: 487 EDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE 546
E+P GY+ ++++ +KG+L+L+HG ID V ++H+ ++A V AR + ++P
Sbjct: 649 ENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSH 708
Query: 547 RHMPRRHRDRIYMEERIWEFI 567
H DR+++ E I +
Sbjct: 709 EHN-VMGPDRVHLYETITRYF 728
|
Serine proteinase. Releases tripeptides from the free amino terminus of proteins. Has a requirement for Pro in the P1 position, but is inactivated by Pro in the P1' position. Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) (taxid: 431947) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 4 EC: . EC: 1 EC: 2 |
| >sp|Q7MUW6|PTP_PORGI Prolyl tripeptidyl peptidase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=ptpA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 264/561 (47%), Gaps = 37/561 (6%)
Query: 14 AEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFA 73
+ + Q E + G +WS +AF ++D S + I+ S+ YP A
Sbjct: 198 GQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL---YYPMA 254
Query: 74 GASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM-HGNILTAQVLNRSQT 132
G + V +G+ A G + LQ G E++L ++W NIL +NR+Q
Sbjct: 255 GTPSHHVTVGIYHLATGKTVY--LQTG----EPKEKFLTNLSWSPDENILYVAEVNRAQN 308
Query: 133 KLKVLKFDIKTGQ-RKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLY 191
+ KV +D +TG+ + + VE +V T L + FIW S + G+ HLY
Sbjct: 309 ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ----FIWQSRRDGWNHLY 364
Query: 192 LHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE 251
L+D G + +T+G+W V G + ++YF T PLE H YC +
Sbjct: 365 LYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK--- 421
Query: 252 APVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLT---V 308
LT G H L + +D S P ++ + ++ GS L + P T +
Sbjct: 422 ---DLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKNPDTGYAM 478
Query: 309 PRIKRLQLEPPDIVQIQANDG-TVLYGALYKPDESRYGPPP-YKTLISVYGGPCVQLVCD 366
P I+ I A DG T LY L P + P Y ++ VYGGP QLV
Sbjct: 479 PEIR--------TGTIMAADGQTPLYYKLTMP--LHFDPAKKYPVIVYVYGGPHAQLVTK 528
Query: 367 SWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426
+W ++V Y+ KG V+ +D+RG+A RG FE I G+ + DQ+ G ++L
Sbjct: 529 TWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKS 588
Query: 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPS 486
Q IG++GWSYGG+++ + DVF+ V+G PV W+ Y+ Y E+Y P
Sbjct: 589 QSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYEIMYGERYFDAPQ 648
Query: 487 EDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE 546
E+P GY+ ++++ +KG+L+L+HG ID V ++H+ ++A V AR + ++P
Sbjct: 649 ENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSH 708
Query: 547 RHMPRRHRDRIYMEERIWEFI 567
H DR+++ E I +
Sbjct: 709 EHN-VMGPDRVHLYETITRYF 728
|
Serine proteinase. Releases tripeptides from the free amino terminus of proteins. Has a requirement for Pro in the P1 position, but is inactivated by Pro in the P1' position. Porphyromonas gingivalis (strain ATCC BAA-308 / W83) (taxid: 242619) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 4 EC: . EC: 1 EC: 2 |
| >sp|Q5AZ42|DPP4_EMENI Probable dipeptidyl peptidase 4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dpp4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 155/579 (26%), Positives = 265/579 (45%), Gaps = 45/579 (7%)
Query: 11 HGLAEYIAQEE-MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRI---MHQGKSSVGSEAQE 66
HG+ ++I +EE + + W+S DS+ +AF + + +P F + M + + +
Sbjct: 187 HGVPDWIYEEEILGDRFALWFSPDSELLAFLTFNETGVPTFTVQYFMDNQEIAPPYPREL 246
Query: 67 DHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGN--ILTA 124
D YP +N V+L ++ + VS + + + E + V W+ L
Sbjct: 247 DIRYPKVSETNPTVKLNILQLSDNTVSTIPIDVF----DPSELIVGEVAWVTDTHTELAV 302
Query: 125 QVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVN--LHDCFT-PLDKGVTKYSGGF-I 179
+ NR Q + KV+ + +G+ K+ + D W++ L + PL G S + +
Sbjct: 303 KAFNRVQDESKVVIVETASGETKIAHERDGTDGWLDNLLSISYVGPLALGSGDASSAYYV 362
Query: 180 WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239
S+ +G+ HLYL +G P+TEG+W V IV +++ VY+ T E HLY
Sbjct: 363 DLSDHSGWTHLYLFSTSGGDPIPLTEGEWEVTSIVSIDQERELVYYLSTQHHSTERHLYS 422
Query: 240 A-----KLYPDWNHTLEA--PVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292
++ P + T+EA V + G ++ + + + + P L S
Sbjct: 423 VSYRTFEITPLVDDTVEAYWSVSFSAKAGYYILTYAGPSVPYQELYSVNQTAPLRTLTS- 481
Query: 293 QDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTL 352
+ +L+ L E L P I +LE P ++ + + PD+ Y L
Sbjct: 482 -NAALIEKLEEYAL--PNISYFELEIPSGEKLNVMQRLPV---GFSPDKK------YPVL 529
Query: 353 ISVYGGPCVQLVCDSWINTVDMRAQYLRSKGIL---VWKLDNRGTARRGLKFEASIKHNC 409
+ YGGP Q V W ++D A Y+ S L W +DNRGT RG +F + +
Sbjct: 530 FTPYGGPGAQEVSKRW-QSLDFNA-YIASDPELEYVTWTVDNRGTGYRGREFRSLVAKQL 587
Query: 410 GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS 469
G+++AEDQ+ A+ K HI ++GWSYGGYL+ L F + APV+
Sbjct: 588 GKLEAEDQVYAAKQAAKLDWVDSEHIAIWGWSYGGYLTGKVLETDSGAFSLGLLTAPVSD 647
Query: 470 WDGYDTFYTEKYMGLPSEDPVGYEYSSVMHH--VHKMKGKLLLVHGMIDENVHFRHTARL 527
W YD+ YTE+YM S + GY +++ H ++G L+ HG D+NVHF++ A L
Sbjct: 648 WRLYDSMYTERYMKTLSTNAEGYNTTAIRHTDGFKNVEGGFLIQHGTGDDNVHFQNAAAL 707
Query: 528 INALVA---ARKPYEILIFPDERHMPRRHRDRIYMEERI 563
+ L+ + ++ F D H R + +++ ++
Sbjct: 708 GDTLIGNGVTPEKMQVQWFTDSDHSIRYNGGNVFLYRQL 746
|
Extracellular dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 4 EC: . EC: 5 |
| >sp|A1CHP1|DPP4_ASPCL Probable dipeptidyl peptidase 4 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dpp4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/578 (25%), Positives = 263/578 (45%), Gaps = 47/578 (8%)
Query: 11 HGLAEYIAQEEM--DRKTGYWWSLDSKFIAFTQVDSSEIPRFRI---MHQGKSSVGSEAQ 65
+G+ ++I +EE+ DR W+S D++++AF + + + +P FR+ M + + +
Sbjct: 188 NGVPDWIYEEEILGDRH-ALWFSPDAEYLAFLRFNETGVPTFRVPYYMDNEEVAPPYPRE 246
Query: 66 EDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM---HGNIL 122
+ YP +N V + ++S A G VS + ++ N + + V W+ H +
Sbjct: 247 LELRYPKVSQTNPTVEVRLLSRATGEVSSVSIKAF----NATDLVIGEVAWLTETHSQV- 301
Query: 123 TAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVNLHDCFTPLDKGVTKYSGGFIWA 181
+ NR Q + KV+ D+ + + K I + D W++ T + + + +I
Sbjct: 302 AVKAFNRVQDQQKVVTVDVLSLKTKTISERDGTDGWLDNALSITYIGQIGDSKAEYYIDI 361
Query: 182 SEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 241
S+++G+ HL+L + G +T+G+W V I+ +++ VY+ T E H+Y
Sbjct: 362 SDESGWAHLWLFPVAGGRPMALTKGEWEVTAILSIDKQRQLVYYLSTQHHSTERHVYSVS 421
Query: 242 LYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRIL--------LCSLQ 293
W P+ A ++ + D P + L LC++
Sbjct: 422 ----WKTFTATPLVDDTVAAVWSASFSSQGGYYILSYRGPDVPYQELYAINSTKPLCTIT 477
Query: 294 DGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLI 353
+ V + +Q T+P+I +L P G L + + S Y L
Sbjct: 478 SNAAVYDVLKQ-YTLPKISYFELRLPS--------GETL-NVMQRLPVSFSPRKKYPILF 527
Query: 354 SVYGGPCVQLVCDSWINTVDMRAQYLRSK---GILVWKLDNRGTARRGLKFEASIKHNCG 410
+ YGGP Q V +W + Y+ S + W +DNRGT +G +F + G
Sbjct: 528 TPYGGPGAQEVSKAWQS--QTFKSYIASDPELEFVTWTVDNRGTGYKGRRFRGQVAKQLG 585
Query: 411 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470
R++A+DQ+ A+ K HI ++GWSYGGYL+ + VF V APV+ W
Sbjct: 586 RLEAQDQVWAAQQAAKLPFIDAEHIAIWGWSYGGYLTGKVIETDSGVFSLGVLTAPVSDW 645
Query: 471 DGYDTFYTEKYMGLPSEDPVGYEYSSV--MHHVHKMKGKLLLVHGMIDENVHFRHTARLI 528
YD+ YTE+YM E+ GY S++ + ++G +L+ HG D+NVHF++ A L+
Sbjct: 646 RFYDSMYTERYMKTLQENANGYNASAIWDVAGYKNVRGGVLIQHGTGDDNVHFQNAAALV 705
Query: 529 NALVA---ARKPYEILIFPDERHMPRRHRDRIYMEERI 563
+ LV + ++ F D H R H +++ ++
Sbjct: 706 DRLVGEGVSPDKLQVQWFTDSDHGIRYHGGSVFLYRQL 743
|
Extracellular dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 4 EC: . EC: 5 |
| >sp|Q0CXB1|DAPB_ASPTN Probable dipeptidyl-aminopeptidase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dapB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 149/576 (25%), Positives = 261/576 (45%), Gaps = 35/576 (6%)
Query: 11 HGLAEYIAQEE-MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSE---AQE 66
+G+ +++ +EE + + WWS D+K++AF + + S +P + + + G + E
Sbjct: 314 YGVPDWVYEEEVLSGNSATWWSNDAKYVAFLRTNESTVPEYPVQYFLSRPSGKKPLPGLE 373
Query: 67 DHA------YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGN 120
D+ YP AGA N V L + V +++ D D+ + V W +
Sbjct: 374 DYPDVRQIKYPKAGAPNPVVNLQFYNVEKNEVFSVEVPDDFAD---DDRIIIEVLWAAES 430
Query: 121 ILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEEL----DSWVNLHDC--FTPLDKGVTKY 174
+ + NR LK+ D ++ K++ +E++ WV F P D +
Sbjct: 431 NVLVRATNRESDVLKIFLIDTESRTGKMVRLEDIVGLDGGWVEPSQSTRFIPADPAAGRP 490
Query: 175 SGGFIWASEKTGFRHL-YLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGP 232
+ G+I G+ HL Y ++ +T G+W +VE V+ G VYF T + P
Sbjct: 491 NDGYIDTVIHDGYDHLAYFTPLDNPEPIMLTTGEWEVVEAPTAVDLRRGLVYFVATKEAP 550
Query: 233 LESHLYCAKLYPDWNHTLEAPVKLTNGKGK-HVAVLDHNMRNFVDFHDSLDSPPRILLCS 291
+ H+Y +L + + P+ T+ G HV+ D + + P + ++ +
Sbjct: 551 TQRHVYQVQL----DGSNLKPLTDTSKPGYYHVSFSDGTAYALLSYQGP-SIPWQAIINT 605
Query: 292 LQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGP-PPYK 350
D + E+ + R+ P + DG L +P + P Y
Sbjct: 606 EGDDVVFEETIEENPELARMVETYAIPSKVFSNITIDGFTLQMVERRP--PHFNPHKKYP 663
Query: 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCG 410
L +YGGP Q V + T+D ++ + G +V LD RGT G + I+ N G
Sbjct: 664 VLFFLYGGPGSQTVDRKF--TIDFQSYVASNLGYIVVTLDGRGTGFIGREARCIIRGNLG 721
Query: 411 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP-DVFQCAVSGAPVTS 469
+A DQ+T A+ ++ + ++GWSYGG+++ TL + FQ ++ APVT
Sbjct: 722 YYEAHDQITAAKMFAEKSYVDESRMAIWGWSYGGFMTLKTLEQDAGQTFQYGMAVAPVTD 781
Query: 470 WDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTARLI 528
W YD+ YTE+YM P +P GY+ SS+ + + L++HG D+NVH ++T LI
Sbjct: 782 WRFYDSIYTERYMHTPQHNPSGYDNSSITDMAALEENVRFLVMHGASDDNVHLQNTLTLI 841
Query: 529 NAL-VAARKPYEILIFPDERHMPRRHRDRIYMEERI 563
+ L ++ + Y++ +PD H H + ER+
Sbjct: 842 DKLDLSNVQNYDVHFYPDSDHSIFFHNAHYMVYERL 877
|
Type IV dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Aspergillus terreus (strain NIH 2624 / FGSC A1156) (taxid: 341663) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 4 EC: . EC: 5 |
| >sp|Q12884|SEPR_HUMAN Seprase OS=Homo sapiens GN=FAP PE=1 SV=5 | Back alignment and function description |
|---|
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 152/575 (26%), Positives = 265/575 (46%), Gaps = 71/575 (12%)
Query: 11 HGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+ +++ +EEM K WWS + KF+A+ + + ++IP + G +
Sbjct: 194 NGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI--NIP 251
Query: 70 YPFAGASNVKVRLGVVS----AAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQ 125
YP AGA N VR+ ++ A GP + + +Y Y + + W+ + Q
Sbjct: 252 YPKAGAKNPVVRIFIIDTTYPAYVGPQE-VPVPAMIASSDY---YFSWLTWVTDERVCLQ 307
Query: 126 VLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTP---LDKGVTKYSGGFIWA- 181
L R Q + D + E+ +W DC +++ T ++GGF +
Sbjct: 308 WLKRVQNVSVLSICDFR---------EDWQTW----DCPKTQEHIEESRTGWAGGFFVST 354
Query: 182 --------------SEKTGFRHL-YLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFT 226
S+K G++H+ Y+ D + IT G W I V + S
Sbjct: 355 PVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQ-ITSGKWEAINIFRVTQDSLFYSSN 413
Query: 227 GTLDGPLESHLYCAKL--YPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSP 284
+ P ++Y + YP + ++ + + ++ ++ +
Sbjct: 414 EFEEYPGRRNIYRISIGSYPPSKKCVTCHLR-----KERCQYYTASFSDYAKYYALVCYG 468
Query: 285 PRILLCSLQDGSL---VLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDE 341
P I + +L DG + L E +K +QL +I +++ ++ T+ Y + P
Sbjct: 469 PGIPISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDEITLWYKMILPPQF 528
Query: 342 SRYGPPPYKTLISVYGGPCVQLV----CDSWINTVDMRAQYLRSK-GILVWKLDNRGTAR 396
R Y LI VYGGPC Q V +WI+ YL SK G+++ +D RGTA
Sbjct: 529 DR--SKKYPLLIQVYGGPCSQSVRSVFAVNWIS-------YLASKEGMVIALVDGRGTAF 579
Query: 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD 456
+G K ++ G + EDQ+T I+ G I ++GWSYGGY+S++ LA
Sbjct: 580 QGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTG 639
Query: 457 VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDP--VGYEYSSVMHHVHKMKG-KLLLVHG 513
+F+C ++ APV+SW+ Y + YTE++MGLP++D Y+ S+VM + LL+HG
Sbjct: 640 LFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHG 699
Query: 514 MIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
D+NVHF+++A++ ALV A+ ++ + + D+ H
Sbjct: 700 TADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNH 734
|
In association with DPP4 is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May have a role in tissue remodeling during development and wound healing, and may contribute to invasiveness in malignant cancers. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 571 | ||||||
| 359490801 | 754 | PREDICTED: dipeptidyl peptidase 8-like [ | 0.984 | 0.745 | 0.856 | 0.0 | |
| 147835769 | 754 | hypothetical protein VITISV_002739 [Viti | 0.984 | 0.745 | 0.856 | 0.0 | |
| 255551275 | 746 | dipeptidyl peptidase IV, putative [Ricin | 0.984 | 0.753 | 0.822 | 0.0 | |
| 356516055 | 770 | PREDICTED: dipeptidyl peptidase 8-like [ | 0.984 | 0.729 | 0.792 | 0.0 | |
| 356509261 | 770 | PREDICTED: dipeptidyl peptidase 8-like [ | 0.984 | 0.729 | 0.788 | 0.0 | |
| 224132788 | 551 | predicted protein [Populus trichocarpa] | 0.963 | 0.998 | 0.814 | 0.0 | |
| 449456387 | 775 | PREDICTED: dipeptidyl peptidase 8-like [ | 0.994 | 0.732 | 0.768 | 0.0 | |
| 224120800 | 551 | predicted protein [Populus trichocarpa] | 0.963 | 0.998 | 0.803 | 0.0 | |
| 357463921 | 773 | Dipeptidyl peptidase [Medicago truncatul | 0.989 | 0.730 | 0.759 | 0.0 | |
| 357463919 | 770 | Dipeptidyl peptidase [Medicago truncatul | 0.984 | 0.729 | 0.761 | 0.0 |
| >gi|359490801|ref|XP_002277892.2| PREDICTED: dipeptidyl peptidase 8-like [Vitis vinifera] gi|302143902|emb|CBI23007.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1028 bits (2657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/563 (85%), Positives = 524/563 (93%), Gaps = 1/563 (0%)
Query: 10 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
THGLAEYIAQEEMDRK GYWWSLDS+FIAFTQVDSSEIP FRIMHQGKSSVG++AQEDHA
Sbjct: 192 THGLAEYIAQEEMDRKNGYWWSLDSRFIAFTQVDSSEIPLFRIMHQGKSSVGADAQEDHA 251
Query: 70 YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT-DQNYDEEYLARVNWMHGNILTAQVLN 128
YPFAGASNVKVRLGVVSAAGGP +WMDL CG D N +EEYLARVNWMHGNILTAQVLN
Sbjct: 252 YPFAGASNVKVRLGVVSAAGGPATWMDLLCGEMHDGNNEEEYLARVNWMHGNILTAQVLN 311
Query: 129 RSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188
RS +KLK+LKFDI TGQRKVILVEE D+WV LHDCFTPLD GV ++SGGFIWASEKTGFR
Sbjct: 312 RSHSKLKILKFDINTGQRKVILVEEQDTWVTLHDCFTPLDVGVNRFSGGFIWASEKTGFR 371
Query: 189 HLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNH 248
HLYLHD NGTCLGPITEGDWMVEQI GVNEA+G VYFTGTLDGPLES+LY AKL+ D N
Sbjct: 372 HLYLHDANGTCLGPITEGDWMVEQIAGVNEAAGLVYFTGTLDGPLESNLYSAKLFLDGNE 431
Query: 249 TLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTV 308
L+AP++LT+GKGKH+ VLDH M++FVD HDSLD PPR+LLCSL DGSLV+PLYEQP TV
Sbjct: 432 PLQAPLRLTHGKGKHMVVLDHQMQSFVDIHDSLDFPPRVLLCSLSDGSLVMPLYEQPFTV 491
Query: 309 PRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW 368
PR KRLQLEPP+IVQIQANDGT L+GALYKPDE+R+GPPPYKTLISVYGGP VQLVCDSW
Sbjct: 492 PRFKRLQLEPPEIVQIQANDGTTLFGALYKPDETRFGPPPYKTLISVYGGPSVQLVCDSW 551
Query: 369 INTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428
+NTVDMRAQYLRS+GILVWKLDNRGTARRGLKFE+ +K+N GRIDAEDQLTGAEWLIK+G
Sbjct: 552 MNTVDMRAQYLRSRGILVWKLDNRGTARRGLKFESCLKYNAGRIDAEDQLTGAEWLIKKG 611
Query: 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSED 488
LAKVGHIGLYGWSYGGYLSA+TLARFPD+F+CAVSGAPVTSWDGYDTFYTEKYMGLPSE+
Sbjct: 612 LAKVGHIGLYGWSYGGYLSAMTLARFPDIFRCAVSGAPVTSWDGYDTFYTEKYMGLPSEN 671
Query: 489 PVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
P GYEYSSVMHHVHK+KG LL+VHGMIDENVHFRHTARL+NALV+A KPYE+LIFPDERH
Sbjct: 672 PAGYEYSSVMHHVHKIKGSLLIVHGMIDENVHFRHTARLVNALVSAGKPYELLIFPDERH 731
Query: 549 MPRRHRDRIYMEERIWEFIERTL 571
MPRR RDRIYMEERIW+FIER L
Sbjct: 732 MPRRFRDRIYMEERIWDFIERNL 754
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147835769|emb|CAN75198.1| hypothetical protein VITISV_002739 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1028 bits (2657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/563 (85%), Positives = 524/563 (93%), Gaps = 1/563 (0%)
Query: 10 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
THGLAEYIAQEEMDRK GYWWSLDS+FIAFTQVDSSEIP FRIMHQGKSSVG++AQEDHA
Sbjct: 192 THGLAEYIAQEEMDRKNGYWWSLDSRFIAFTQVDSSEIPLFRIMHQGKSSVGADAQEDHA 251
Query: 70 YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT-DQNYDEEYLARVNWMHGNILTAQVLN 128
YPFAGASNVKVRLGVVSAAGGP +WMDL CG D N +EEYLARVNWMHGNILTAQVLN
Sbjct: 252 YPFAGASNVKVRLGVVSAAGGPATWMDLLCGEXHDGNNEEEYLARVNWMHGNILTAQVLN 311
Query: 129 RSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188
RS +KLK+LKFDI TGQRKVILVEE D+WV LHDCFTPLD GV ++SGGFIWASEKTGFR
Sbjct: 312 RSHSKLKILKFDINTGQRKVILVEEQDTWVTLHDCFTPLDVGVNRFSGGFIWASEKTGFR 371
Query: 189 HLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNH 248
HLYLHD NGTCLGPITEGDWMVEQI GVNEA+G VYFTGTLDGPLES+LY AKL+ D N
Sbjct: 372 HLYLHDANGTCLGPITEGDWMVEQIAGVNEAAGLVYFTGTLDGPLESNLYSAKLFLDGNE 431
Query: 249 TLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTV 308
L+AP++LT+GKGKH+ VLDH M++FVD HDSLD PPR+LLCSL DGSLV+PLYEQP TV
Sbjct: 432 PLQAPLRLTHGKGKHMVVLDHQMQSFVDIHDSLDFPPRVLLCSLSDGSLVMPLYEQPFTV 491
Query: 309 PRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW 368
PR KRLQLEPP+IVQIQANDGT L+GALYKPDE+R+GPPPYKTLISVYGGP VQLVCDSW
Sbjct: 492 PRFKRLQLEPPEIVQIQANDGTTLFGALYKPDETRFGPPPYKTLISVYGGPSVQLVCDSW 551
Query: 369 INTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428
+NTVDMRAQYLRS+GILVWKLDNRGTARRGLKFE+ +K+N GRIDAEDQLTGAEWLIK+G
Sbjct: 552 MNTVDMRAQYLRSRGILVWKLDNRGTARRGLKFESCLKYNAGRIDAEDQLTGAEWLIKKG 611
Query: 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSED 488
LAKVGHIGLYGWSYGGYLSA+TLARFPD+F+CAVSGAPVTSWDGYDTFYTEKYMGLPSE+
Sbjct: 612 LAKVGHIGLYGWSYGGYLSAMTLARFPDIFRCAVSGAPVTSWDGYDTFYTEKYMGLPSEN 671
Query: 489 PVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
P GYEYSSVMHHVHK+KG LL+VHGMIDENVHFRHTARL+NALV+A KPYE+LIFPDERH
Sbjct: 672 PAGYEYSSVMHHVHKIKGSLLIVHGMIDENVHFRHTARLVNALVSAGKPYELLIFPDERH 731
Query: 549 MPRRHRDRIYMEERIWEFIERTL 571
MPRR RDRIYMEERIW+FIER L
Sbjct: 732 MPRRFRDRIYMEERIWDFIERNL 754
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255551275|ref|XP_002516684.1| dipeptidyl peptidase IV, putative [Ricinus communis] gi|223544179|gb|EEF45703.1| dipeptidyl peptidase IV, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/563 (82%), Positives = 514/563 (91%), Gaps = 1/563 (0%)
Query: 10 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
THGLAEYIAQEEMDRK GYWWSLDSKFIAFTQVDSS IP FRIMHQGKSSVG E+QEDHA
Sbjct: 184 THGLAEYIAQEEMDRKNGYWWSLDSKFIAFTQVDSSGIPLFRIMHQGKSSVGLESQEDHA 243
Query: 70 YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ-NYDEEYLARVNWMHGNILTAQVLN 128
YPFAGASNVKVRLGVVS AGG ++WMDL CGGT++ + ++EYL RVNWM G+ILTAQVLN
Sbjct: 244 YPFAGASNVKVRLGVVSIAGGSITWMDLVCGGTEELDNEDEYLTRVNWMRGDILTAQVLN 303
Query: 129 RSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188
RS TKL+++KFDIKTGQ KVILVEE D WVNLHDCFTPLDK VTKYSGGFIWASEKTGFR
Sbjct: 304 RSHTKLRIIKFDIKTGQGKVILVEEQDKWVNLHDCFTPLDKSVTKYSGGFIWASEKTGFR 363
Query: 189 HLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNH 248
HLYLHD NGTCLGPITEG+WMVEQI GVNEA+G VYFT TLDGPLE +LYC KL+ D +
Sbjct: 364 HLYLHDANGTCLGPITEGEWMVEQIAGVNEAAGLVYFTATLDGPLEFNLYCTKLFRDDSQ 423
Query: 249 TLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTV 308
PV+LT+GKGKHV VLDH+MRNFVD HDSLD PPR+L SL DGS+++PLYEQP T+
Sbjct: 424 NFLGPVRLTHGKGKHVVVLDHHMRNFVDIHDSLDFPPRVLYTSLHDGSVIMPLYEQPFTI 483
Query: 309 PRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW 368
PR KRL+LEPP+IVQ+QA+DGT+LYGALYKPD +++GPPPYKTLISVYGGPCVQ VCDSW
Sbjct: 484 PRFKRLELEPPEIVQVQASDGTILYGALYKPDPTKFGPPPYKTLISVYGGPCVQYVCDSW 543
Query: 369 INTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428
+NTVDMRAQ+LRSKGILVWKLDNRG+ARRGLKFE S+K+N GRIDAEDQLTG EWLIKQG
Sbjct: 544 LNTVDMRAQFLRSKGILVWKLDNRGSARRGLKFEGSLKYNAGRIDAEDQLTGTEWLIKQG 603
Query: 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSED 488
LAKVGHIG+YGWSYGGY+SA+ LARFPDVF+CAVSGAPVTSWDGYDTFYTEKYMGLPS++
Sbjct: 604 LAKVGHIGVYGWSYGGYMSAMILARFPDVFRCAVSGAPVTSWDGYDTFYTEKYMGLPSQN 663
Query: 489 PVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
P GYEYSSVMHHVHK+KG+LLLVHGMIDENVHFRHTARL+NALVAA KPYE+LIFPDERH
Sbjct: 664 PSGYEYSSVMHHVHKLKGRLLLVHGMIDENVHFRHTARLVNALVAAGKPYELLIFPDERH 723
Query: 549 MPRRHRDRIYMEERIWEFIERTL 571
R HR R+YMEERIWEF+ER+L
Sbjct: 724 TLRWHRSRVYMEERIWEFVERSL 746
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516055|ref|XP_003526712.1| PREDICTED: dipeptidyl peptidase 8-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/563 (79%), Positives = 517/563 (91%), Gaps = 1/563 (0%)
Query: 10 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
THGLAEYIAQEEMDRKTGYWWSLDSK+IAFT+VDSSEIP FRIMHQGKSSVG EAQEDH+
Sbjct: 208 THGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKSSVGLEAQEDHS 267
Query: 70 YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ-NYDEEYLARVNWMHGNILTAQVLN 128
YPFAGASNVKVRLGVVS AG ++WM+L CGGT+Q N +EEYLARVNWMHGNILTAQ+LN
Sbjct: 268 YPFAGASNVKVRLGVVSVAGSSITWMNLLCGGTEQQNNEEEYLARVNWMHGNILTAQILN 327
Query: 129 RSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188
R TK+K++KFDI+TGQRK ILVEE SW+N+HDCFTPLDKGVTK+SGGFIWASEKTGFR
Sbjct: 328 RHHTKIKIVKFDIRTGQRKNILVEENSSWINIHDCFTPLDKGVTKFSGGFIWASEKTGFR 387
Query: 189 HLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNH 248
HLYLHD NGTCLGPITEG+WMVEQI GVNEA+G +YFTGTLDGPLES+LYCAKL+ D N
Sbjct: 388 HLYLHDANGTCLGPITEGEWMVEQIAGVNEATGLIYFTGTLDGPLESNLYCAKLFVDGNQ 447
Query: 249 TLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTV 308
L+AP++LT+ KGKH+ VLDH+M++FVD HDSL PPR+LLCSL+DGS++ PLYEQ T+
Sbjct: 448 PLQAPIRLTHSKGKHIVVLDHHMQSFVDIHDSLGCPPRVLLCSLEDGSVIKPLYEQSFTI 507
Query: 309 PRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW 368
PR K+LQLEPP+IV+IQANDGT LYGALYKPD S++GPPPYKT+I+VYGGP VQLVC+SW
Sbjct: 508 PRFKKLQLEPPEIVEIQANDGTTLYGALYKPDASKFGPPPYKTMINVYGGPSVQLVCNSW 567
Query: 369 INTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428
++TVD+RAQYLR++GILVWKLDNRGTARRGLKFE+ +KH G+IDA+DQLTGAEWL+KQG
Sbjct: 568 LSTVDLRAQYLRNQGILVWKLDNRGTARRGLKFESYLKHKLGQIDADDQLTGAEWLVKQG 627
Query: 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSED 488
LAK GHIGLYGWSYGGYLSA+TL+R+PD F+CA++GAPVTSWDGYDTFYTEKYMGLPSE+
Sbjct: 628 LAKGGHIGLYGWSYGGYLSAMTLSRYPDFFKCAIAGAPVTSWDGYDTFYTEKYMGLPSEN 687
Query: 489 PVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
+GYE SVM+ V ++KG+LLLVHGMIDENVHFRHTARLINALVAA KPYE+++FPDERH
Sbjct: 688 KLGYESGSVMNQVQQLKGRLLLVHGMIDENVHFRHTARLINALVAAGKPYELIVFPDERH 747
Query: 549 MPRRHRDRIYMEERIWEFIERTL 571
MPRRH DR+YME R+W+FI+R L
Sbjct: 748 MPRRHSDRVYMEGRMWDFIQRNL 770
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356509261|ref|XP_003523369.1| PREDICTED: dipeptidyl peptidase 8-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/563 (78%), Positives = 510/563 (90%), Gaps = 1/563 (0%)
Query: 10 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
THGLAEYIAQEEMDRKTGYWWSLDSK+IAFT+VDSSEIP FRIMHQGKSSVG EAQEDH
Sbjct: 208 THGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKSSVGLEAQEDHP 267
Query: 70 YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ-NYDEEYLARVNWMHGNILTAQVLN 128
YPFAGASNVKVRLGVVS AG ++WMDL CGGT+Q N +EEYLARVNWMHGNILTAQ+LN
Sbjct: 268 YPFAGASNVKVRLGVVSVAGSSITWMDLLCGGTEQQNNEEEYLARVNWMHGNILTAQILN 327
Query: 129 RSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188
R TK+K++KFDI+TGQRK IL EE SW+N+HDCFTPLDKGVTK+SGGFIWASEKTGFR
Sbjct: 328 RHHTKIKIVKFDIRTGQRKNILFEENSSWINIHDCFTPLDKGVTKFSGGFIWASEKTGFR 387
Query: 189 HLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNH 248
HLYLHD NGTCLGPITEG+WMVEQI GVNEA+G +YFTGTLDGPLES+LYC+KL+ D +
Sbjct: 388 HLYLHDANGTCLGPITEGEWMVEQIAGVNEATGLIYFTGTLDGPLESNLYCSKLFVDGSQ 447
Query: 249 TLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTV 308
L+ PV+LT+ KGKH+ VLDH+MRNFVD HDSL PPR+LLCSL+DGSL+ PLYEQ T+
Sbjct: 448 PLQVPVRLTHSKGKHIVVLDHHMRNFVDIHDSLGCPPRVLLCSLEDGSLIKPLYEQSFTI 507
Query: 309 PRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW 368
PR K+LQLEPP+IV+I+ANDGT LYGALYKPD SR+GPPPYKT+I+VYGGP VQLV +SW
Sbjct: 508 PRFKKLQLEPPEIVEIRANDGTTLYGALYKPDASRFGPPPYKTMINVYGGPSVQLVSNSW 567
Query: 369 INTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428
++TVD+RAQYLR++GILVWKLDNRGTARRGLKFE+ +K G+IDA+DQLTGAEWL+KQG
Sbjct: 568 LSTVDLRAQYLRNQGILVWKLDNRGTARRGLKFESYLKQKLGQIDADDQLTGAEWLVKQG 627
Query: 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSED 488
L K GHIGLYGWSYGGYLSA+TL+R+PD F+CA++GAPVTSWDGYDTFYTEKYMGLPSE+
Sbjct: 628 LTKAGHIGLYGWSYGGYLSAMTLSRYPDFFKCAIAGAPVTSWDGYDTFYTEKYMGLPSEN 687
Query: 489 PVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
GYE SVM+ VH++KG+LLLVHGMIDENVHFRHTARLINALVAA K YE+++FPDERH
Sbjct: 688 KSGYESGSVMNQVHQLKGRLLLVHGMIDENVHFRHTARLINALVAAGKSYELIVFPDERH 747
Query: 549 MPRRHRDRIYMEERIWEFIERTL 571
MPRRH DR+YME R+W+FI+R L
Sbjct: 748 MPRRHSDRVYMEGRMWDFIQRNL 770
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224132788|ref|XP_002321410.1| predicted protein [Populus trichocarpa] gi|222868406|gb|EEF05537.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/551 (81%), Positives = 496/551 (90%), Gaps = 1/551 (0%)
Query: 22 MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVR 81
MDRK GYWWSLDS+FIAFTQVDSSEIP FRIMHQGKSSVGSEAQEDH YPFAGASNVKV
Sbjct: 1 MDRKNGYWWSLDSQFIAFTQVDSSEIPLFRIMHQGKSSVGSEAQEDHPYPFAGASNVKVH 60
Query: 82 LGVVSAAGGPVSWMDLQCGGTDQ-NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFD 140
LGVVS GG V+W+DL CGGT++ + ++EYLAR+NWMHGNIL AQVLNRS +KLK++KFD
Sbjct: 61 LGVVSVHGGSVTWLDLLCGGTEKPDNEDEYLARINWMHGNILIAQVLNRSHSKLKLIKFD 120
Query: 141 IKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL 200
IK G+++VI VEE W+NLHDCFTPLDKG+TKYS GFIWASEKTGFRHLYLHD NGTCL
Sbjct: 121 IKAGRKEVIYVEEQFPWINLHDCFTPLDKGITKYSEGFIWASEKTGFRHLYLHDANGTCL 180
Query: 201 GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK 260
GPITEGDWMVEQI GVNEA+G +YFT T DGPLESHLY AKL+PD + L+APV+LTNGK
Sbjct: 181 GPITEGDWMVEQIAGVNEAAGMIYFTATRDGPLESHLYRAKLFPDEKNALQAPVRLTNGK 240
Query: 261 GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPD 320
GKH VLDH+++NFVD HDSLD PPR+LLCSL DG ++PL+EQ T+PR KRL+LEPP
Sbjct: 241 GKHSVVLDHHLQNFVDIHDSLDCPPRVLLCSLIDGREIMPLFEQAFTIPRFKRLELEPPK 300
Query: 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR 380
IVQIQANDGT+LYGALY+PD +R+GPPPYKTLISVYGGP VQ VCDSWI+TVDMRAQYLR
Sbjct: 301 IVQIQANDGTILYGALYEPDPTRFGPPPYKTLISVYGGPSVQYVCDSWISTVDMRAQYLR 360
Query: 381 SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGW 440
SKGILVWKLDNRG+ARRGLKFE ++K N GR DAEDQLTGAEWLIKQGLAK GHIGLYGW
Sbjct: 361 SKGILVWKLDNRGSARRGLKFEGALKGNPGRFDAEDQLTGAEWLIKQGLAKAGHIGLYGW 420
Query: 441 SYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHH 500
SYGGY+SA+ LARFPDVF CAVSGAPVTSWDGYDTFYTEKYMGLP E+P GYEY SVMHH
Sbjct: 421 SYGGYMSAMILARFPDVFCCAVSGAPVTSWDGYDTFYTEKYMGLPYENPTGYEYGSVMHH 480
Query: 501 VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYME 560
VHK+KG+LLLVHGMIDENVHFRHTARL+NALVAA KPYE+LIFPDERHMPRRH DRIYME
Sbjct: 481 VHKLKGRLLLVHGMIDENVHFRHTARLVNALVAAGKPYELLIFPDERHMPRRHTDRIYME 540
Query: 561 ERIWEFIERTL 571
ERIWEF ER L
Sbjct: 541 ERIWEFFERNL 551
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449456387|ref|XP_004145931.1| PREDICTED: dipeptidyl peptidase 8-like [Cucumis sativus] gi|449497343|ref|XP_004160376.1| PREDICTED: dipeptidyl peptidase 8-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/571 (76%), Positives = 509/571 (89%), Gaps = 3/571 (0%)
Query: 1 MTLAFHVLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSV 60
+T+ + +HGLAEYIA+EEMDRK GYWWSLDSK+IAFTQVD+S+IP FRIMHQGKSSV
Sbjct: 208 LTVGANTNISHGLAEYIAEEEMDRKNGYWWSLDSKYIAFTQVDTSKIPPFRIMHQGKSSV 267
Query: 61 GSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGN 120
GS+AQEDHAY FAG SN VRLGVVS +GGP++WMDL CG T + EEYLARV WMH N
Sbjct: 268 GSDAQEDHAYSFAGTSNAVVRLGVVSVSGGPITWMDLLCGETGE---EEYLARVCWMHEN 324
Query: 121 ILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIW 180
IL AQ+LNR TKLK+L+FDIKTG+RKV+LVEE DSW+NLHDCFTPLDK ++KYSGGFIW
Sbjct: 325 ILIAQILNRLHTKLKILRFDIKTGERKVLLVEEEDSWINLHDCFTPLDKSISKYSGGFIW 384
Query: 181 ASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCA 240
ASEKTGFRHLYLHD +GTCLGPITEGDWMVEQI GVNEA+G VYFTGTLDGPLESHLYCA
Sbjct: 385 ASEKTGFRHLYLHDGHGTCLGPITEGDWMVEQIAGVNEATGLVYFTGTLDGPLESHLYCA 444
Query: 241 KLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300
KL N L+ P++LT+GKGKHV VLDH M +FVD HDSLDSPPR+LLCSL+DGS++LP
Sbjct: 445 KLTTAGNTPLDPPIRLTHGKGKHVVVLDHRMGSFVDIHDSLDSPPRVLLCSLKDGSVILP 504
Query: 301 LYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPC 360
+YEQ L +PRI+RL LEPP++V++QA DGT+LYGALYKP E+ +GPPPYKT+I VYGGP
Sbjct: 505 IYEQTLAIPRIERLHLEPPEMVEVQACDGTLLYGALYKPSEAIFGPPPYKTMIIVYGGPS 564
Query: 361 VQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTG 420
VQLV +SWINTVDMRAQYLRS+GILVWKLDNRGTARRGLKFEA++K+N G IDA+DQL G
Sbjct: 565 VQLVSNSWINTVDMRAQYLRSRGILVWKLDNRGTARRGLKFEAALKYNIGYIDADDQLVG 624
Query: 421 AEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEK 480
A+WLI+QGLA+ G IGLYGWSYGG+LSA++LAR+PD+F+CAVSGAPVTSWDGYDTFYTEK
Sbjct: 625 AKWLIRQGLARAGEIGLYGWSYGGFLSAMSLARYPDIFRCAVSGAPVTSWDGYDTFYTEK 684
Query: 481 YMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI 540
YMGLP+ DP Y+ SSV++H+ KM G LLLVHGMIDENVHFRHTARL+NAL++ARK YE+
Sbjct: 685 YMGLPTRDPEVYKRSSVIYHIEKMTGSLLLVHGMIDENVHFRHTARLVNALISARKKYEL 744
Query: 541 LIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
LIFPDERHMPR+H+DRIYMEERIWEFI+R L
Sbjct: 745 LIFPDERHMPRQHQDRIYMEERIWEFIQRNL 775
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120800|ref|XP_002318420.1| predicted protein [Populus trichocarpa] gi|222859093|gb|EEE96640.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/551 (80%), Positives = 493/551 (89%), Gaps = 1/551 (0%)
Query: 22 MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVR 81
MDRK GYWWSLDSKFIAFTQVDSSEIP FRIMHQGKSSVGSEAQEDH YPFAGASNVKVR
Sbjct: 1 MDRKNGYWWSLDSKFIAFTQVDSSEIPLFRIMHQGKSSVGSEAQEDHPYPFAGASNVKVR 60
Query: 82 LGVVSAAGGPVSWMDLQCGGTDQ-NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFD 140
LGVVS G ++WMDL CGGT + + ++EYLARVNWMHGN+L AQVLNRS +KLK+LKFD
Sbjct: 61 LGVVSVHGDSITWMDLLCGGTKEPDNEDEYLARVNWMHGNVLIAQVLNRSHSKLKLLKFD 120
Query: 141 IKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL 200
IKTG+++V+ EE W+NLHDCFTPLDKG+TKYSGGFIWASEK+GFRHL +HD NG CL
Sbjct: 121 IKTGKKEVLYAEEQLPWINLHDCFTPLDKGITKYSGGFIWASEKSGFRHLCVHDANGACL 180
Query: 201 GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK 260
GPITEG+WMVEQI GVNEA+G +YFT TLDGPLESHLY AKLYP N+ L+APV+LTNGK
Sbjct: 181 GPITEGEWMVEQIAGVNEAAGIIYFTATLDGPLESHLYRAKLYPIENNPLQAPVRLTNGK 240
Query: 261 GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPD 320
GKH VLDH+++NFVD HDSLDSPPR+ LCSL DG ++PL+EQ T+PR KRL+LEPP
Sbjct: 241 GKHSVVLDHHLQNFVDIHDSLDSPPRVSLCSLFDGREIMPLFEQSFTIPRYKRLELEPPK 300
Query: 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR 380
IVQIQANDGT+LYGALY PD +R+GPPPYKT+ISVYGGP VQ VCDSWI T DMRAQYLR
Sbjct: 301 IVQIQANDGTILYGALYDPDPTRFGPPPYKTVISVYGGPGVQYVCDSWIGTADMRAQYLR 360
Query: 381 SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGW 440
S+GILVWKLDNRG+ARRGLKFE ++K N GR DAEDQLTGAEWLIKQGLAK GHIGL GW
Sbjct: 361 SQGILVWKLDNRGSARRGLKFEGALKGNPGRFDAEDQLTGAEWLIKQGLAKAGHIGLCGW 420
Query: 441 SYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHH 500
SYGGY+SA+ LARFPDVF CAVSGAPVTSWDGYDTFYTEKYMGLPS++P GYEY SVMHH
Sbjct: 421 SYGGYMSAVILARFPDVFCCAVSGAPVTSWDGYDTFYTEKYMGLPSDNPKGYEYGSVMHH 480
Query: 501 VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYME 560
VHK+KG+LLLVHGMIDENVHFRHTARL+NALVAA KPYE+LIFPDERHMPRRH DRIYME
Sbjct: 481 VHKLKGRLLLVHGMIDENVHFRHTARLVNALVAAGKPYELLIFPDERHMPRRHNDRIYME 540
Query: 561 ERIWEFIERTL 571
ERIWEF +R+L
Sbjct: 541 ERIWEFFQRSL 551
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357463921|ref|XP_003602242.1| Dipeptidyl peptidase [Medicago truncatula] gi|355491290|gb|AES72493.1| Dipeptidyl peptidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/566 (75%), Positives = 505/566 (89%), Gaps = 1/566 (0%)
Query: 7 VLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQE 66
V THGLAEYIAQEEMDRKTGYWWSLDSK+IAFT+VD SEIP FRIMHQG+SSVG++AQE
Sbjct: 208 VSPTHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDYSEIPLFRIMHQGRSSVGTDAQE 267
Query: 67 DHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ-NYDEEYLARVNWMHGNILTAQ 125
DH YPFAGASN K+RLGVVS AGG +WMDL CGG + + ++EYLARVNWMHGNILTAQ
Sbjct: 268 DHPYPFAGASNAKIRLGVVSVAGGSTTWMDLVCGGVKELDNEDEYLARVNWMHGNILTAQ 327
Query: 126 VLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT 185
++NR QTK+K++KFDI+TGQR+ ILVEE +W+N+HDCFTP DKGVTK+SGGFIWASEK+
Sbjct: 328 IINRHQTKIKIVKFDIRTGQRRDILVEENKTWINIHDCFTPFDKGVTKFSGGFIWASEKS 387
Query: 186 GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPD 245
GFRHLYLHD NG CLGPITEG+WMVEQI GVNEA+G VYFTGTLD PLES+LYCAKL+ D
Sbjct: 388 GFRHLYLHDANGICLGPITEGEWMVEQIAGVNEATGLVYFTGTLDSPLESNLYCAKLFVD 447
Query: 246 WNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQP 305
L+AP +LT+ KGKH+ VLDH+MR FVD HDSL PPR+LLCSL+DG++++PLYEQ
Sbjct: 448 GTQPLQAPTRLTHSKGKHIVVLDHHMRTFVDIHDSLSCPPRVLLCSLEDGTIIMPLYEQQ 507
Query: 306 LTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVC 365
+ +P+ K+LQLEPP+IV+IQ++DGT LYGALYKPD SR+GPPPYKT+I+VYGGP VQLV
Sbjct: 508 IPIPKSKKLQLEPPEIVEIQSDDGTTLYGALYKPDPSRFGPPPYKTMINVYGGPSVQLVS 567
Query: 366 DSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425
+SW+NTVD+RAQYLR+KGILVWKLDNRGT+RRGLKFE +K G+IDA+DQ TGAEWL+
Sbjct: 568 NSWLNTVDLRAQYLRNKGILVWKLDNRGTSRRGLKFEGYLKQKLGQIDADDQFTGAEWLV 627
Query: 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLP 485
K GLA+ GHIGLYGWSYGGYLSA+TL+R+PD F+CAV+GAPVTSWDGYDTFYTEKYMGLP
Sbjct: 628 KNGLAEFGHIGLYGWSYGGYLSAMTLSRYPDFFKCAVAGAPVTSWDGYDTFYTEKYMGLP 687
Query: 486 SEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD 545
SE GY +SVM+HVHKM+G+LL+VHGMIDENVHFRHTARLINALVAA K YE++IFPD
Sbjct: 688 SEYKSGYARASVMNHVHKMRGRLLIVHGMIDENVHFRHTARLINALVAAGKTYELIIFPD 747
Query: 546 ERHMPRRHRDRIYMEERIWEFIERTL 571
ERHMPRR+ DR+YMEER+WEFI+R L
Sbjct: 748 ERHMPRRYSDRVYMEERMWEFIDRNL 773
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357463919|ref|XP_003602241.1| Dipeptidyl peptidase [Medicago truncatula] gi|355491289|gb|AES72492.1| Dipeptidyl peptidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/563 (76%), Positives = 504/563 (89%), Gaps = 1/563 (0%)
Query: 10 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
THGLAEYIAQEEMDRKTGYWWSLDSK+IAFT+VD SEIP FRIMHQG+SSVG++AQEDH
Sbjct: 208 THGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDYSEIPLFRIMHQGRSSVGTDAQEDHP 267
Query: 70 YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ-NYDEEYLARVNWMHGNILTAQVLN 128
YPFAGASN K+RLGVVS AGG +WMDL CGG + + ++EYLARVNWMHGNILTAQ++N
Sbjct: 268 YPFAGASNAKIRLGVVSVAGGSTTWMDLVCGGVKELDNEDEYLARVNWMHGNILTAQIIN 327
Query: 129 RSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188
R QTK+K++KFDI+TGQR+ ILVEE +W+N+HDCFTP DKGVTK+SGGFIWASEK+GFR
Sbjct: 328 RHQTKIKIVKFDIRTGQRRDILVEENKTWINIHDCFTPFDKGVTKFSGGFIWASEKSGFR 387
Query: 189 HLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNH 248
HLYLHD NG CLGPITEG+WMVEQI GVNEA+G VYFTGTLD PLES+LYCAKL+ D
Sbjct: 388 HLYLHDANGICLGPITEGEWMVEQIAGVNEATGLVYFTGTLDSPLESNLYCAKLFVDGTQ 447
Query: 249 TLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTV 308
L+AP +LT+ KGKH+ VLDH+MR FVD HDSL PPR+LLCSL+DG++++PLYEQ + +
Sbjct: 448 PLQAPTRLTHSKGKHIVVLDHHMRTFVDIHDSLSCPPRVLLCSLEDGTIIMPLYEQQIPI 507
Query: 309 PRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW 368
P+ K+LQLEPP+IV+IQ++DGT LYGALYKPD SR+GPPPYKT+I+VYGGP VQLV +SW
Sbjct: 508 PKSKKLQLEPPEIVEIQSDDGTTLYGALYKPDPSRFGPPPYKTMINVYGGPSVQLVSNSW 567
Query: 369 INTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428
+NTVD+RAQYLR+KGILVWKLDNRGT+RRGLKFE +K G+IDA+DQ TGAEWL+K G
Sbjct: 568 LNTVDLRAQYLRNKGILVWKLDNRGTSRRGLKFEGYLKQKLGQIDADDQFTGAEWLVKNG 627
Query: 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSED 488
LA+ GHIGLYGWSYGGYLSA+TL+R+PD F+CAV+GAPVTSWDGYDTFYTEKYMGLPSE
Sbjct: 628 LAEFGHIGLYGWSYGGYLSAMTLSRYPDFFKCAVAGAPVTSWDGYDTFYTEKYMGLPSEY 687
Query: 489 PVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
GY +SVM+HVHKM+G+LL+VHGMIDENVHFRHTARLINALVAA K YE++IFPDERH
Sbjct: 688 KSGYARASVMNHVHKMRGRLLIVHGMIDENVHFRHTARLINALVAAGKTYELIIFPDERH 747
Query: 549 MPRRHRDRIYMEERIWEFIERTL 571
MPRR+ DR+YMEER+WEFI+R L
Sbjct: 748 MPRRYSDRVYMEERMWEFIDRNL 770
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 571 | ||||||
| TAIR|locus:2169789 | 746 | AT5G24260 [Arabidopsis thalian | 0.978 | 0.749 | 0.701 | 2.3e-220 | |
| TIGR_CMR|SO_3990 | 763 | SO_3990 "dipeptidyl peptidase | 0.942 | 0.705 | 0.345 | 1.2e-83 | |
| UNIPROTKB|Q487B7 | 752 | CPS_1104 "Dipeptidyl peptidase | 0.935 | 0.710 | 0.330 | 4.1e-81 | |
| TIGR_CMR|CPS_1104 | 752 | CPS_1104 "dipeptidyl peptidase | 0.935 | 0.710 | 0.330 | 4.1e-81 | |
| ZFIN|ZDB-GENE-061013-777 | 885 | dpp9 "dipeptidyl-peptidase 9" | 0.633 | 0.409 | 0.350 | 2.1e-71 | |
| UNIPROTKB|F1P1L1 | 855 | DPP9 "Uncharacterized protein" | 0.633 | 0.423 | 0.356 | 1.1e-69 | |
| UNIPROTKB|E2R8Z1 | 891 | DPP9 "Uncharacterized protein" | 0.633 | 0.406 | 0.350 | 2.5e-69 | |
| UNIPROTKB|Q86TI2 | 863 | DPP9 "Dipeptidyl peptidase 9" | 0.633 | 0.419 | 0.353 | 5e-69 | |
| RGD|1310901 | 892 | Dpp8 "dipeptidylpeptidase 8" [ | 0.635 | 0.406 | 0.351 | 7e-69 | |
| MGI|MGI:1921638 | 892 | Dpp8 "dipeptidylpeptidase 8" [ | 0.635 | 0.406 | 0.346 | 1.6e-68 |
| TAIR|locus:2169789 AT5G24260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2128 (754.2 bits), Expect = 2.3e-220, P = 2.3e-220
Identities = 398/567 (70%), Positives = 467/567 (82%)
Query: 10 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+HGLAEYIAQEEMDR+ GYWWSLDSKFIA+T+VDSS+IP FRIMHQGK SVGSEAQEDHA
Sbjct: 183 SHGLAEYIAQEEMDRRNGYWWSLDSKFIAYTEVDSSQIPLFRIMHQGKRSVGSEAQEDHA 242
Query: 70 YPFAGASNVKVRLGVVSAAGG-PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLN 128
YPFAGA N +RLGVVS+AGG +WM+L CGG N ++EYL RVNW+ GN+L QVLN
Sbjct: 243 YPFAGALNSTLRLGVVSSAGGGKTTWMNLVCGGRG-NTEDEYLGRVNWLPGNVLIVQVLN 301
Query: 129 RSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDK-GVTKYSGGFIWASEKTGF 187
RSQ+KLK++ FDI TGQ V+L EE D+WV LHDCFTPL+K ++ SGGFIWASE+TGF
Sbjct: 302 RSQSKLKIISFDINTGQGNVLLTEESDTWVTLHDCFTPLEKVPSSRGSGGFIWASERTGF 361
Query: 188 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247
RHLYL++ +GTCLG IT G+WMVEQI GVNE VYFTGTLDGPLE++LYCAKL N
Sbjct: 362 RHLYLYESDGTCLGAITSGEWMVEQIAGVNEPMSLVYFTGTLDGPLETNLYCAKLEAG-N 420
Query: 248 HTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLT 307
+ P++LT+GKGKH+ VLDH M+NFVD HDS+DSPPR+ LCSL DG+++ LYEQ
Sbjct: 421 TSRCQPMRLTHGKGKHIVVLDHQMKNFVDIHDSVDSPPRVSLCSLSDGTVLKILYEQTSP 480
Query: 308 VPRIKRLQLEPPDIVQIQANDG-TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCD 366
+ +K L+LEPP+ VQIQANDG T LYGA+YKPD S++GPPPYKT+I+VYGGP VQLV D
Sbjct: 481 IQILKSLKLEPPEFVQIQANDGKTTLYGAVYKPDSSKFGPPPYKTMINVYGGPSVQLVYD 540
Query: 367 SWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426
SWINTVDMR QYLRS+GILVWKLDNRGTARRGLKFE+ +KHNCG +DAEDQ+TGA+WLI+
Sbjct: 541 SWINTVDMRTQYLRSRGILVWKLDNRGTARRGLKFESWMKHNCGYVDAEDQVTGAKWLIE 600
Query: 427 QGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPS 486
QGLAK HI A L R+P++F CAVSGAPVTSWDGYD+FYTEKYMGLP+
Sbjct: 601 QGLAKPDHIGVYGWSYGGYLSATLLTRYPEIFNCAVSGAPVTSWDGYDSFYTEKYMGLPT 660
Query: 487 EDPVGYEYSSVMHHVHKM--KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544
E+ Y SSVMHHV + K KL+LVHGMIDENVHFRHTARL+NALV A K YE+LIFP
Sbjct: 661 EEE-RYLKSSVMHHVGNLTDKQKLMLVHGMIDENVHFRHTARLVNALVEAGKRYELLIFP 719
Query: 545 DERHMPRRHRDRIYMEERIWEFIERTL 571
DERHMPR+ +DRIYME+RIWEFIE+ L
Sbjct: 720 DERHMPRKKKDRIYMEQRIWEFIEKNL 746
|
|
| TIGR_CMR|SO_3990 SO_3990 "dipeptidyl peptidase IV" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 196/568 (34%), Positives = 305/568 (53%)
Query: 11 HGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAY 70
+ +AE++AQEEMDR TGYWW+ D IAFT++D S + ++ + + + Y
Sbjct: 215 NAMAEFVAQEEMDRMTGYWWAPDESAIAFTRIDESAV---ELVTRNEIYADGIKLTEQRY 271
Query: 71 PFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM-HGNILTAQVLNR 129
P AG +NV+++LGVV+ + W+ L D+N D YL RV+W+ L+ Q +R
Sbjct: 272 PAAGKNNVEIQLGVVTLKNKAIDWVTLS---DDKNKDI-YLPRVDWLPDSKHLSFQWQSR 327
Query: 130 SQTKL--KVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGF 187
Q KL +++ D T + K ++ E D+WVNL++ D K FIWASE+ GF
Sbjct: 328 DQQKLDLQLVALDSLT-KPKTLVKERSDAWVNLNN-----DLHFLKQQSAFIWASERDGF 381
Query: 188 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247
HLYL D+ G +T+G+W V+++ ++E +G VYFTG D P+E HLY L
Sbjct: 382 NHLYLFDLKGKLKTQLTKGNWAVDELEFIDETAGWVYFTGRKDTPIEKHLYRVPLA---G 438
Query: 248 HTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLT 307
+E ++++ G H V N ++D+ +SL PP++ L D L EQ
Sbjct: 439 GNIE---RVSSEAGMHDPVFADNQSVYLDYFNSLSQPPQVSLHG--DKGQHLAWVEQNQV 493
Query: 308 V---PRIKRLQL-EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQL 363
P L + P+ +++A DG +L L+KP G Y ++ VYGGP QL
Sbjct: 494 KAGHPLYDYAGLWQLPEFKELKAEDGQILQTRLFKPVPFDAGKK-YPAVVRVYGGPHAQL 552
Query: 364 VCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEW 423
V +SW + D QYL +G +V++LDNRG+A RG KFE I + G + DQ G ++
Sbjct: 553 VTNSW-SEQDYFTQYLVQQGYVVFQLDNRGSAHRGTKFEQVIYRHLGEAEVNDQKVGVDY 611
Query: 424 LIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMG 483
L ++ ++L + PD F+ A+SGAPVT W YDT YTE+Y+
Sbjct: 612 LRSLPFVDSNNVAIYGHSYGGYMALMSLFKAPDYFKAAISGAPVTDWRLYDTHYTERYLA 671
Query: 484 LPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIF 543
P+ + GYE SS+ +V + LL+ HGM D+NV F ++ R+ AL K ++++ +
Sbjct: 672 HPASNEQGYEASSLFPYVKNYQSGLLMYHGMADDNVLFENSTRVYKALQDEGKLFQMIDY 731
Query: 544 PDERHMPRRHRDRIYMEERIWEFIERTL 571
P +H R + R ++ + +F++R L
Sbjct: 732 PGSKHSMRGEKVRNHLYRSLADFLDRQL 759
|
|
| UNIPROTKB|Q487B7 CPS_1104 "Dipeptidyl peptidase IV" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 188/568 (33%), Positives = 309/568 (54%)
Query: 11 HGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQE--DH 68
+G++E++AQEEM R TGYWWS + K IAF +VD E P ++ ++ + +E E +
Sbjct: 207 NGMSEFVAQEEMSRMTGYWWSPNEKHIAFLRVD--ETPVKTVI---RNEIYAEKIELIEQ 261
Query: 69 AYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVL 127
YP G +NV ++L V G + +++L G +++ Y+ RV W+ + ++ Q+
Sbjct: 262 RYPATGTNNVHIQLAVTDIKGKKIRFVEL---GDNKDI---YIPRVKWLSDSKKVSYQLQ 315
Query: 128 NRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGF 187
+R Q L + +++K ++K +LVE+ W+NLH T L T FIWASE+ G+
Sbjct: 316 SRDQKTLTLKTYNLKKRRQKTLLVEKSSHWLNLHKDLTFLSDNKT-----FIWASERDGY 370
Query: 188 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247
+HLY +++ G + +T+G+W+V+ + V+E +G VYFTG D PLE HLY K+ P
Sbjct: 371 KHLYHYNLKGELISQLTKGEWVVDSLTRVDEKNGWVYFTGRADTPLERHLY--KV-PLSG 427
Query: 248 HTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLT 307
+ E ++T G H +++D + +P ++ L S +G + L E +T
Sbjct: 428 KSPENVQRITKRNGFHSINFSQTSESYIDSFSNTKTPKQVSLHSA-NGEHITWLAENKVT 486
Query: 308 -----VPRIKRLQLEPPDIVQIQANDGTV-LYGALYKPDESRYGPPPYKTLISVYGGPCV 361
P L + P+ ++++DG LY LYKP + G Y ++ VYGGP
Sbjct: 487 PEHPVAPYYNGLVM--PEFGSLKSDDGKADLYYKLYKPKNMQPGKK-YPVIVRVYGGPHA 543
Query: 362 QLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGA 421
QLV + W D+ QY+ +G +V++LDNRG+ RG FE I G+++ DQ+TG
Sbjct: 544 QLVTNKW-QGADI-TQYMLQQGYIVYQLDNRGSNYRGTAFEFPIYETLGQVEVADQITGV 601
Query: 422 EWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKY 481
++L I +T+ + D F+ VSGAPVT W YDT YTE+Y
Sbjct: 602 KYLHTLPYVDKERIGVFGHSYGGYMALMTMFKAGDYFKAGVSGAPVTDWMLYDTHYTERY 661
Query: 482 MGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 541
+ P+ + GY+ SSV +V + G +++ HGM D+NV F +T +LI AL K +E++
Sbjct: 662 LNHPNVNAAGYQQSSVFPYVSGLSGPMMVYHGMADDNVLFTNTTKLIKALQDEGKLFELM 721
Query: 542 IFPDERHMPRRHRDRIYMEERIWEFIER 569
+P +H R + ++++ I +F +R
Sbjct: 722 TYPGSKHSMRGKKVKVHLNATIMDFFDR 749
|
|
| TIGR_CMR|CPS_1104 CPS_1104 "dipeptidyl peptidase IV" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 188/568 (33%), Positives = 309/568 (54%)
Query: 11 HGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQE--DH 68
+G++E++AQEEM R TGYWWS + K IAF +VD E P ++ ++ + +E E +
Sbjct: 207 NGMSEFVAQEEMSRMTGYWWSPNEKHIAFLRVD--ETPVKTVI---RNEIYAEKIELIEQ 261
Query: 69 AYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVL 127
YP G +NV ++L V G + +++L G +++ Y+ RV W+ + ++ Q+
Sbjct: 262 RYPATGTNNVHIQLAVTDIKGKKIRFVEL---GDNKDI---YIPRVKWLSDSKKVSYQLQ 315
Query: 128 NRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGF 187
+R Q L + +++K ++K +LVE+ W+NLH T L T FIWASE+ G+
Sbjct: 316 SRDQKTLTLKTYNLKKRRQKTLLVEKSSHWLNLHKDLTFLSDNKT-----FIWASERDGY 370
Query: 188 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247
+HLY +++ G + +T+G+W+V+ + V+E +G VYFTG D PLE HLY K+ P
Sbjct: 371 KHLYHYNLKGELISQLTKGEWVVDSLTRVDEKNGWVYFTGRADTPLERHLY--KV-PLSG 427
Query: 248 HTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLT 307
+ E ++T G H +++D + +P ++ L S +G + L E +T
Sbjct: 428 KSPENVQRITKRNGFHSINFSQTSESYIDSFSNTKTPKQVSLHSA-NGEHITWLAENKVT 486
Query: 308 -----VPRIKRLQLEPPDIVQIQANDGTV-LYGALYKPDESRYGPPPYKTLISVYGGPCV 361
P L + P+ ++++DG LY LYKP + G Y ++ VYGGP
Sbjct: 487 PEHPVAPYYNGLVM--PEFGSLKSDDGKADLYYKLYKPKNMQPGKK-YPVIVRVYGGPHA 543
Query: 362 QLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGA 421
QLV + W D+ QY+ +G +V++LDNRG+ RG FE I G+++ DQ+TG
Sbjct: 544 QLVTNKW-QGADI-TQYMLQQGYIVYQLDNRGSNYRGTAFEFPIYETLGQVEVADQITGV 601
Query: 422 EWLIKQGLAKVGHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKY 481
++L I +T+ + D F+ VSGAPVT W YDT YTE+Y
Sbjct: 602 KYLHTLPYVDKERIGVFGHSYGGYMALMTMFKAGDYFKAGVSGAPVTDWMLYDTHYTERY 661
Query: 482 MGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 541
+ P+ + GY+ SSV +V + G +++ HGM D+NV F +T +LI AL K +E++
Sbjct: 662 LNHPNVNAAGYQQSSVFPYVSGLSGPMMVYHGMADDNVLFTNTTKLIKALQDEGKLFELM 721
Query: 542 IFPDERHMPRRHRDRIYMEERIWEFIER 569
+P +H R + ++++ I +F +R
Sbjct: 722 TYPGSKHSMRGKKVKVHLNATIMDFFDR 749
|
|
| ZFIN|ZDB-GENE-061013-777 dpp9 "dipeptidyl-peptidase 9" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 549 (198.3 bits), Expect = 2.1e-71, Sum P(3) = 2.1e-71
Identities = 134/382 (35%), Positives = 202/382 (52%)
Query: 203 ITEGDWMVEQIVG----VNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258
+T G+W V G VNE + VYF GT D PLE HLY Y V+LT
Sbjct: 511 LTSGEWEVLARHGSKIWVNEETKLVYFQGTKDTPLEHHLYVVS-YESPGEI----VRLTK 565
Query: 259 GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQP-LTVPRIK----R 313
H + N F+ + ++ +PP + + L G+ PL+++P ++ R
Sbjct: 566 PGFSHSCSVSQNFDMFISHYSNVSTPPCVHVYKLT-GADSDPLHKEPEFWASMMEATGCR 624
Query: 314 LQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVD 373
PP+I A+ G LYG LYKP + G + T++ VYGGP VQLV +S+
Sbjct: 625 PDYIPPEIFSFPASSGFRLYGMLYKPHNLKPGKK-HPTILFVYGGPQVQLVNNSYKGVKY 683
Query: 374 MRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI-KQGLAKV 432
+R L S G V +D RG+ +RGLKFE ++K+ G+++ EDQ+ G +++ K +
Sbjct: 684 LRLNTLASLGYAVVVIDGRGSCQRGLKFEGALKNKMGQVEIEDQVEGLQFVAEKYKFIDL 743
Query: 433 GHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGY 492
+ + L P++F+ A++GAPVT W YDT YTE+YM +P + GY
Sbjct: 744 SRVAIHGWSYGGFLSLMGLIHRPNIFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQQGY 803
Query: 493 EYSSVMHHVHKMKG---KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549
E SV HV K+ +LL++HG +DENVHF HT L++ L+ A KPY++ I+P+ERH
Sbjct: 804 EAGSVALHVDKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHS 863
Query: 550 PRRHRDRIYMEERIWEFIERTL 571
R + E + F+++ L
Sbjct: 864 IRCPESGEHYEIMLLYFLQQHL 885
|
|
| UNIPROTKB|F1P1L1 DPP9 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 548 (198.0 bits), Expect = 1.1e-69, Sum P(3) = 1.1e-69
Identities = 136/382 (35%), Positives = 199/382 (52%)
Query: 203 ITEGDWMVEQIVG----VNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258
+T G+W V G VNEA+ VYF GT D PLE HLY Y V+LT
Sbjct: 481 LTGGEWEVLARHGSKIWVNEATKLVYFQGTKDTPLEHHLYVVS-YESPGEI----VRLTI 535
Query: 259 GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEP 318
H + N F+ + S+ +PP + + L GS PL++QP + P
Sbjct: 536 PGFSHSCSMSQNFDMFISHYSSVSTPPCVHVYKLS-GSDDDPLHKQPKFWASMMEAASCP 594
Query: 319 PDIV-----QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVD 373
PD V + LYG +YKP + + G + T++ VYGGP VQLV +S+
Sbjct: 595 PDYVPPEIFHFRTQSDVELYGMVYKPHDVQPGKK-HPTVLFVYGGPQVQLVNNSFKGIKY 653
Query: 374 MRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI-KQGLAKV 432
+R L S G V +D RG+ +RGL+FE ++K+ G+++ EDQ+ G ++ K G +
Sbjct: 654 LRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQVEGLYYVAEKYGFIDL 713
Query: 433 GHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGY 492
+ + L P+VF+ A++GAPVT W YDT YTE+YM +P + GY
Sbjct: 714 SRVAIHGWSYGGFLSLMGLICKPNVFKIAIAGAPVTVWMAYDTGYTERYMDIPENNQQGY 773
Query: 493 EYSSVMHHVHKMKG---KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549
E SV HV K+ +LL++HG +DENVHF HT L++ L+ A KPY++ I+P+ERH
Sbjct: 774 EAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHS 833
Query: 550 PRRHRDRIYMEERIWEFIERTL 571
R + E + F++ L
Sbjct: 834 IRCPESGEHYEITLLHFLQEYL 855
|
|
| UNIPROTKB|E2R8Z1 DPP9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 547 (197.6 bits), Expect = 2.5e-69, Sum P(3) = 2.5e-69
Identities = 134/382 (35%), Positives = 196/382 (51%)
Query: 203 ITEGDWMVEQIVG----VNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258
+T G+W V G VNE + VYF GT D PLE HLY Y V+LT
Sbjct: 517 LTSGEWEVLARHGSKIWVNEETKLVYFQGTKDTPLEHHLYVVS-YESAGEI----VRLTT 571
Query: 259 GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEP 318
H + N F+ + S+ +PP + + L G PL++QP + P
Sbjct: 572 PGFSHSCSMSQNFDMFISHYSSVGTPPCVHVYKLS-GPDDDPLHKQPRFWASMMEAASCP 630
Query: 319 PDIV-----QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVD 373
PD V LYG +YKP + G + T++ VYGGP VQLV +S+
Sbjct: 631 PDYVPPEIFHFHTRSDVRLYGMIYKPHAVQPGKK-HPTVLFVYGGPQVQLVNNSFKGIKY 689
Query: 374 MRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI-KQGLAKV 432
+R L S G V +D RG+ +RGL+FE ++K+ G+++ EDQ+ G +++ K G +
Sbjct: 690 LRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQVEGLQFVAEKYGFIDL 749
Query: 433 GHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGY 492
+ + L P VF+ A++GAPVT W YDT YTE+YM +P + +GY
Sbjct: 750 SRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQLGY 809
Query: 493 EYSSVMHHVHKMKG---KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549
E SV HV K+ +LL++HG +DENVHF HT L++ L+ A KPY++ I+P+ERH
Sbjct: 810 EAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHS 869
Query: 550 PRRHRDRIYMEERIWEFIERTL 571
R + E + F++ L
Sbjct: 870 IRCPESGEHYEVTLLHFLQEYL 891
|
|
| UNIPROTKB|Q86TI2 DPP9 "Dipeptidyl peptidase 9" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 543 (196.2 bits), Expect = 5.0e-69, Sum P(3) = 5.0e-69
Identities = 135/382 (35%), Positives = 196/382 (51%)
Query: 203 ITEGDWMVEQIVG----VNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258
+T G+W V G VNE + VYF GT D PLE HLY + E V+LT
Sbjct: 489 LTSGEWEVLARHGSKIWVNEETKLVYFQGTKDTPLEHHLYVVS----YEAAGEI-VRLTT 543
Query: 259 GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEP 318
H + N FV + S+ +PP + + L G PL++QP + P
Sbjct: 544 PGFSHSCSMSQNFDMFVSHYSSVSTPPCVHVYKLS-GPDDDPLHKQPRFWASMMEAASCP 602
Query: 319 PDIV-----QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVD 373
PD V LYG +YKP + G + T++ VYGGP VQLV +S+
Sbjct: 603 PDYVPPEIFHFHTRSDVRLYGMIYKPHALQPGKK-HPTVLFVYGGPQVQLVNNSFKGIKY 661
Query: 374 MRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI-KQGLAKV 432
+R L S G V +D RG+ +RGL+FE ++K+ G+++ EDQ+ G +++ K G +
Sbjct: 662 LRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQVEGLQFVAEKYGFIDL 721
Query: 433 GHIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGY 492
+ + L P VF+ A++GAPVT W YDT YTE+YM +P + GY
Sbjct: 722 SRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQHGY 781
Query: 493 EYSSVMHHVHKMKG---KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549
E SV HV K+ +LL++HG +DENVHF HT L++ L+ A KPY++ I+P+ERH
Sbjct: 782 EAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHS 841
Query: 550 PRRHRDRIYMEERIWEFIERTL 571
R + E + F++ L
Sbjct: 842 IRCPESGEHYEVTLLHFLQEYL 863
|
|
| RGD|1310901 Dpp8 "dipeptidylpeptidase 8" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 525 (189.9 bits), Expect = 7.0e-69, Sum P(3) = 7.0e-69
Identities = 134/381 (35%), Positives = 192/381 (50%)
Query: 203 ITEGDWMV----EQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258
IT G+W V + V+EA VYF GT D PLE HLY Y + V+LT+
Sbjct: 508 ITSGEWEVLGRHGSNIWVDEARKLVYFEGTKDSPLEHHLYVTS-YANPGDV----VRLTD 562
Query: 259 GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ--DGSLVLPLYEQPLTV-PRIKRL- 314
H L + F+ + + SP + L L D V E T+ L
Sbjct: 563 RGYSHSCCLSRHCDFFISKYSNQKSPHCVSLYKLSSPDDDPVHKTKEFWATILDSAGPLP 622
Query: 315 QLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDM 374
PP+I ++ G LYG LYKP + + G Y T++ +YGGP VQLV + +
Sbjct: 623 DYTPPEIFSFESTTGFTLYGMLYKPHDLQPGKK-YPTVLFIYGGPQVQLVNNRFKGVKYF 681
Query: 375 RAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVG 433
R L S G +V +DNRG+ RGLKFE + K+ G+I+ +DQ+ G ++L Q +
Sbjct: 682 RLNTLASLGYVVVVIDNRGSCHRGLKFEGAFKYKMGQIEIDDQVEGLQYLASQYDFIDLD 741
Query: 434 HIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYE 493
+ + L + D+F+ A++GAPVT W YDT YTE+YMG P ++ GY
Sbjct: 742 RVGIHGWSYGGYLSLMALMQRSDIFRVAIAGAPVTLWIFYDTGYTERYMGHPDQNEQGYY 801
Query: 494 YSSVMHHVHKMKG---KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550
SV K +LLL+HG +DENVHF HT+ L++ LV A KPY++ I+P ERH
Sbjct: 802 LGSVAMQAEKFPSEPNRLLLLHGFLDENVHFAHTSILLSFLVRAGKPYDLQIYPQERHSI 861
Query: 551 RRHRDRIYMEERIWEFIERTL 571
R + E + +++ L
Sbjct: 862 RVPESGEHYELHLLHYLQENL 882
|
|
| MGI|MGI:1921638 Dpp8 "dipeptidylpeptidase 8" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 519 (187.8 bits), Expect = 1.6e-68, Sum P(3) = 1.6e-68
Identities = 132/381 (34%), Positives = 192/381 (50%)
Query: 203 ITEGDWMV----EQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258
IT G+W V + V+EA VYF GT D PLE HLY Y + V+LT+
Sbjct: 508 ITSGEWEVLGRHGSNIWVDEARKLVYFEGTKDSPLEHHLYVTS-YANPGEV----VRLTD 562
Query: 259 GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ--DGSLVLPLYEQPLTV-PRIKRL- 314
H L + F+ + + +P + L L + V E T+ L
Sbjct: 563 RGYSHSCCLSRHCDFFISKYSNQKNPHCVSLYKLSSPEDDPVHKTKEFWATILDSAGPLP 622
Query: 315 QLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDM 374
PP+I ++ G LYG LYKP + + G Y T++ +YGGP VQLV + +
Sbjct: 623 DYTPPEIFSFESTTGFTLYGMLYKPHDLQPGKK-YPTVLFIYGGPQVQLVNNRFKGVKYF 681
Query: 375 RAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVG 433
R L S G +V +DNRG+ RGLKFE + K+ G+I+ +DQ+ G ++L Q +
Sbjct: 682 RLNTLASLGYVVVVIDNRGSCHRGLKFEGAFKYKMGQIEIDDQVEGLQYLASQYDFIDLD 741
Query: 434 HIXXXXXXXXXXXXAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYE 493
+ + L + D+F+ A++GAPVT W YDT YTE+YMG P ++ GY
Sbjct: 742 RVGIHGWSYGGYLSLMALMQRSDIFRVAIAGAPVTLWIFYDTGYTERYMGHPDQNEQGYY 801
Query: 494 YSSVMHHVHKMKG---KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550
SV K +LLL+HG +DENVHF HT+ L++ LV A KPY++ I+P ERH
Sbjct: 802 LGSVAMQAEKFPSEPNRLLLLHGFLDENVHFAHTSILLSFLVRAGKPYDLQIYPQERHSI 861
Query: 551 RRHRDRIYMEERIWEFIERTL 571
R + E + +++ L
Sbjct: 862 RVPESGEHYELHLLHYLQENL 882
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 571 | |||
| pfam00930 | 348 | pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP I | 4e-75 | |
| pfam00326 | 212 | pfam00326, Peptidase_S9, Prolyl oligopeptidase fam | 4e-54 | |
| COG1506 | 620 | COG1506, DAP2, Dipeptidyl aminopeptidases/acylamin | 8e-53 | |
| COG1505 | 648 | COG1505, COG1505, Serine proteases of the peptidas | 2e-07 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 4e-06 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 1e-05 | |
| COG0412 | 236 | COG0412, COG0412, Dienelactone hydrolase and relat | 1e-04 | |
| COG1073 | 299 | COG1073, COG1073, Hydrolases of the alpha/beta sup | 1e-04 |
| >gnl|CDD|216201 pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal region | Back alignment and domain information |
|---|
Score = 242 bits (619), Expect = 4e-75
Identities = 95/279 (34%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 11 HGLAEYIAQEE-MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+GLA+++ +EE + YWWS D +AF + D SE+P + E +
Sbjct: 88 NGLADWVYEEEVFGSNSAYWWSPDGSRLAFLRFDESEVPIITLPDYT----DDGPAEVRS 143
Query: 70 --YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVL 127
YP AGA N V+L V A G + D + + Y+ RV W L Q L
Sbjct: 144 IKYPKAGAPNPTVKLFVYDLASGKTVELVP---PDDLSDADYYITRVKWTPDEKLLVQWL 200
Query: 128 NRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGF 187
NR Q L ++ D +TG+ V+L E D WV LH L + GF+W SE+ G+
Sbjct: 201 NRDQNVLDLVLVDTETGRTVVLLEETSDGWVELHQDPVFL-----RDGSGFLWISERDGY 255
Query: 188 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247
+HLYL+D++G +T G+W V I+GV+E VYFT T D P E HLY L
Sbjct: 256 KHLYLYDLDGKLPRQLTSGNWEVTSILGVDEKRDLVYFTATEDSPGERHLYRVSL----- 310
Query: 248 HTLEAPVKLTNGKGKHV-AVLDHNMRNFVDFHDSLDSPP 285
P +LT+ G H A N + +V + D+PP
Sbjct: 311 -DGGEPQRLTDESGDHRSASFSPNGKYYVLTYSGPDTPP 348
|
This family is an alignment of the region to the N-terminal side of the active site. The Prosite motif does not correspond to this Pfam entry. Length = 348 |
| >gnl|CDD|215859 pfam00326, Peptidase_S9, Prolyl oligopeptidase family | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 4e-54
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 7/209 (3%)
Query: 370 NTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429
+ Q L +G +V + RG+ G + + K + G+ + +D + AE+LI QG
Sbjct: 1 PSFSWNLQLLADRGYVVAVANGRGSGGYGRAWHDAGKGDLGQNEFDDFIAAAEYLIAQGY 60
Query: 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF---YTEKYMGL-- 484
+ ++G SYGGYL+ L + PD+F+ AV+ PV W Y + +TE+YM
Sbjct: 61 VDPDRLAIWGGSYGGYLTGAALNQRPDLFKAAVAVVPVVDWLTYMSDTSPFTERYMEWGN 120
Query: 485 PSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILI 542
P ++ GY Y S +K LLL+HG+ D+ V +L+ AL A K +LI
Sbjct: 121 PWDNEEGYRYLSPYSPYDNVKAYPPLLLIHGLHDDRVPPAEALKLVAALQAKGKNVLLLI 180
Query: 543 FPDERHMPRRHRDRIYMEERIWEFIERTL 571
FPDE H + R++ R F+ + L
Sbjct: 181 FPDEGHGGGKPRNKREEYARELAFLLKVL 209
|
Length = 212 |
| >gnl|CDD|224423 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 190 bits (483), Expect = 8e-53
Identities = 91/335 (27%), Positives = 148/335 (44%), Gaps = 19/335 (5%)
Query: 242 LYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301
L V+ +G V D + R + S PP I L + + +
Sbjct: 293 SPLFRVDDLGGGVEGLSGDDGGVPGFDVDGRKLALAYSSPTEPPEIYLYDRGEEAKLTSS 352
Query: 302 YEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCV 361
+K+++L P+ V ++NDG ++G LYKP Y ++ ++GGP
Sbjct: 353 NN-----SGLKKVKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKK-YPLIVYIHGGPSA 406
Query: 362 QLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGA 421
Q + + Q L S G V + RG+ G +F +I+ + G +D ED +
Sbjct: 407 Q-----VGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAV 461
Query: 422 EWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKY 481
+ L+K L IG+ G SYGGY++ + + P F+ AV+ A W Y TE
Sbjct: 462 DALVKLPLVDPERIGITGGSYGGYMTLLAATKTPR-FKAAVAVAGGVDWLLYFGESTEGL 520
Query: 482 MGLPSE-------DPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAA 534
P E D YE S + + +K LLL+HG D+ V +L++AL
Sbjct: 521 RFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRK 580
Query: 535 RKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569
KP E+++FPDE H R +R+ + + I ++ +R
Sbjct: 581 GKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKR 615
|
Length = 620 |
| >gnl|CDD|224422 COG1505, COG1505, Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 2e-07
Identities = 41/171 (23%), Positives = 61/171 (35%), Gaps = 19/171 (11%)
Query: 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD 474
+D + AE LIK+G+ +G+ G S GG L L + P++F AV P+ Y
Sbjct: 482 DDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYH 541
Query: 475 TFY-----TEKYMG---LPSEDPVGYEYSSVMHHVHKMKGK-----LLLVHGMIDENVHF 521
+Y G P + YS H +K L+ + D+ VH
Sbjct: 542 LLTAGSSWIAEY-GNPDDPEDRAFLLAYSP----YHNLKPGQKYPPTLITTSLHDDRVHP 596
Query: 522 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEER-IWEFIERTL 571
H + L P + H I E + F+ RTL
Sbjct: 597 AHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647
|
Length = 648 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 27/149 (18%), Positives = 47/149 (31%), Gaps = 10/149 (6%)
Query: 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAV 462
S ED L+ +G + L G S GG ++ AR P+ V
Sbjct: 37 DSDGPPRTPYSLEDDAADLAALLDA--LGLGPVVLVGHSLGGAVALAAAARRPERVAGLV 94
Query: 463 -SGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHF 521
P+ + + L + + + + +L++HG D V
Sbjct: 95 LISPPLRDLEELLAADAAALLALLRAALLDADLREALARLTV---PVLVIHGEDDPLVPP 151
Query: 522 RHTARLINALVAARKPYEILIFPDERHMP 550
L A E+++ P H+P
Sbjct: 152 EA----ARRLAEALPGAELVVLPGAGHLP 176
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-05
Identities = 33/173 (19%), Positives = 50/173 (28%), Gaps = 47/173 (27%)
Query: 376 AQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHI 435
A+ L S+G V +D G AE ++ I
Sbjct: 19 ARALASRGYNVVAVDYPGHGAS------------------LGAPDAEAVLADAPLDPERI 60
Query: 436 GLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYS 495
L G S GG ++ + AR P V V A
Sbjct: 61 VLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPDA------------------------ 96
Query: 496 SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
+ + K+ +L++HG D V L AL P E+++ H
Sbjct: 97 --LDDLAKLTVPVLIIHGTRDGVVPPEEAEALAAAL---PGPAELVVIEGAGH 144
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|223489 COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 30/134 (22%), Positives = 49/134 (36%), Gaps = 26/134 (19%)
Query: 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD 474
D ++L +Q IG+ G+ GG L+ + R P+V + AV ++ G
Sbjct: 94 ADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEV-KAAV------AFYG-- 144
Query: 475 TFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAA 534
GL ++D K+K +LL D + L AL A
Sbjct: 145 --------GLIADDT---------ADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDA 187
Query: 535 RKPYEILIFPDERH 548
++ I+P H
Sbjct: 188 GVKVDLEIYPGAGH 201
|
Length = 236 |
| >gnl|CDD|223999 COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 1e-04
Identities = 33/147 (22%), Positives = 55/147 (37%), Gaps = 6/147 (4%)
Query: 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSE 487
I ++G S GG L+ + L P++ + + +T E +
Sbjct: 155 TRLDASRIVVWGESLGGALALLLLGANPELARELIDYL-ITPGGFAPLPAPEAPLDTLPL 213
Query: 488 DPVGYEYSSVMHHVHKMKGK-LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE 546
V K+ + +LLVHG DE V R L A A +P ++L P
Sbjct: 214 RAVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEA--ARERPKKLLFVPGG 271
Query: 547 RHMPRRHRDRIYME--ERIWEFIERTL 571
H+ + +++ EF+ER L
Sbjct: 272 GHIDLYDNPPAVEQALDKLAEFLERHL 298
|
Length = 299 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 571 | |||
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 100.0 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 100.0 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 100.0 | |
| PRK10115 | 686 | protease 2; Provisional | 100.0 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 100.0 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 100.0 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 100.0 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 99.96 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 99.96 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.91 | |
| PRK10566 | 249 | esterase; Provisional | 99.91 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.9 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.89 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.89 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.88 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.88 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.87 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.87 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.87 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.86 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.86 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.86 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.84 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.84 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.84 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.83 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.83 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.83 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.83 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.83 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.83 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.82 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.81 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.8 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.8 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.8 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.78 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.77 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.76 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.76 | |
| PLN02511 | 388 | hydrolase | 99.76 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.76 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.75 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 99.75 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.75 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.75 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.74 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.74 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.74 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.74 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.74 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.74 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.73 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.73 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.73 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.73 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.73 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.72 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.72 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.72 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.72 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.72 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.72 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.71 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.71 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.71 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.71 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.7 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.7 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.7 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.69 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.69 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.69 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.69 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.69 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.69 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.68 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.68 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.68 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.67 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.67 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.67 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.67 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.67 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.66 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.66 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.65 | |
| PLN02578 | 354 | hydrolase | 99.65 | |
| PLN00021 | 313 | chlorophyllase | 99.64 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.64 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.63 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.63 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.63 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.63 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.62 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.62 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.62 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.62 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.61 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 99.61 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.61 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.61 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.61 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.6 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.6 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.59 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.58 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.57 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.57 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.56 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.52 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.51 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.5 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.48 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 99.48 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 99.47 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.46 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.45 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 99.42 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 99.42 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.39 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.39 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.35 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.34 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.33 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.31 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 99.3 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.29 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.27 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.24 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.23 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 99.23 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.19 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 99.17 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.15 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 99.15 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.15 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.12 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.12 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.11 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 99.1 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.09 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.08 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.08 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 99.08 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 99.07 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.07 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.05 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 99.04 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 99.04 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.01 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 98.96 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.96 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.91 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 98.9 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 98.9 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 98.89 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.88 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 98.87 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.84 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.82 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.81 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.8 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 98.8 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 98.73 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.71 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 98.65 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 98.6 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 98.6 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.6 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.59 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.56 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 98.51 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 98.51 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.5 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.49 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 98.49 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 98.46 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 98.44 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 98.44 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.43 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.41 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.39 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 98.34 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 98.32 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.31 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 98.28 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.2 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.19 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 98.15 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.15 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 98.08 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 98.07 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 98.04 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 98.03 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.03 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 98.03 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.02 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 97.99 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 97.99 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 97.96 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 97.95 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 97.93 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 97.91 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 97.9 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 97.86 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 97.86 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 97.85 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 97.85 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.84 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.81 | |
| PTZ00421 | 493 | coronin; Provisional | 97.81 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 97.79 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 97.79 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 97.77 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.77 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 97.76 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 97.73 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 97.68 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 97.64 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 97.62 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 97.6 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 97.6 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 97.59 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 97.57 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 97.56 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 97.55 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 97.55 | |
| PTZ00420 | 568 | coronin; Provisional | 97.54 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 97.53 | |
| KOG1273 | 405 | consensus WD40 repeat protein [General function pr | 97.52 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.51 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 97.51 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 97.5 | |
| KOG2139 | 445 | consensus WD40 repeat protein [General function pr | 97.48 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 97.47 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 97.46 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 97.46 | |
| PTZ00420 | 568 | coronin; Provisional | 97.46 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 97.43 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 97.42 | |
| PRK10115 | 686 | protease 2; Provisional | 97.41 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 97.37 | |
| KOG2139 | 445 | consensus WD40 repeat protein [General function pr | 97.33 | |
| KOG1274 | 933 | consensus WD40 repeat protein [General function pr | 97.32 | |
| KOG2314 | 698 | consensus Translation initiation factor 3, subunit | 97.31 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 97.24 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 97.24 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 97.23 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 97.22 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 97.15 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.15 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.12 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 97.12 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 97.09 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 97.08 | |
| KOG2096 | 420 | consensus WD40 repeat protein [General function pr | 97.07 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 97.05 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 97.04 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 97.04 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 97.03 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 96.92 | |
| KOG4389 | 601 | consensus Acetylcholinesterase/Butyrylcholinestera | 96.91 | |
| KOG2314 | 698 | consensus Translation initiation factor 3, subunit | 96.89 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 96.89 | |
| PTZ00421 | 493 | coronin; Provisional | 96.86 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.85 | |
| TIGR02171 | 912 | Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou | 96.85 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 96.81 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 96.81 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 96.79 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 96.76 | |
| KOG1273 | 405 | consensus WD40 repeat protein [General function pr | 96.75 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 96.71 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.67 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 96.58 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 96.58 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 96.57 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 96.56 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 96.46 | |
| KOG1445 | 1012 | consensus Tumor-specific antigen (contains WD repe | 96.4 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 96.39 | |
| KOG2394 | 636 | consensus WD40 protein DMR-N9 [General function pr | 96.36 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 96.35 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 96.26 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 96.17 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.08 | |
| KOG1445 | 1012 | consensus Tumor-specific antigen (contains WD repe | 95.99 | |
| PF02333 | 381 | Phytase: Phytase; InterPro: IPR003431 Phytase (3.1 | 95.98 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 95.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 95.96 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 95.73 | |
| KOG4497 | 447 | consensus Uncharacterized conserved protein WDR8, | 95.7 | |
| KOG2315 | 566 | consensus Predicted translation initiation factor | 95.65 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 95.64 | |
| KOG2096 | 420 | consensus WD40 repeat protein [General function pr | 95.61 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.57 | |
| KOG4328 | 498 | consensus WD40 protein [Function unknown] | 95.57 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 95.55 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 95.53 | |
| KOG0771 | 398 | consensus Prolactin regulatory element-binding pro | 95.5 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 95.47 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 95.4 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 95.35 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 95.35 | |
| PLN02209 | 437 | serine carboxypeptidase | 95.35 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 95.32 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 95.28 | |
| TIGR02171 | 912 | Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou | 95.26 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 95.21 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 95.21 | |
| KOG0771 | 398 | consensus Prolactin regulatory element-binding pro | 95.18 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 95.17 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 95.1 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 95.1 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 94.95 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 94.94 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 94.93 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 94.84 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 94.77 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 94.67 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 94.64 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 94.61 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 94.51 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 94.47 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 94.42 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 94.41 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 94.38 | |
| KOG0303 | 472 | consensus Actin-binding protein Coronin, contains | 94.37 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 94.28 | |
| KOG1007 | 370 | consensus WD repeat protein TSSC1, WD repeat super | 94.26 | |
| KOG2315 | 566 | consensus Predicted translation initiation factor | 94.2 | |
| KOG4497 | 447 | consensus Uncharacterized conserved protein WDR8, | 94.18 | |
| KOG1539 | 910 | consensus WD repeat protein [General function pred | 94.13 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 94.13 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 93.9 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 93.84 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 93.64 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 93.46 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 93.41 | |
| KOG0290 | 364 | consensus Conserved WD40 repeat-containing protein | 93.39 | |
| KOG1274 | 933 | consensus WD40 repeat protein [General function pr | 93.38 | |
| KOG2106 | 626 | consensus Uncharacterized conserved protein, conta | 93.27 | |
| KOG2919 | 406 | consensus Guanine nucleotide-binding protein [Gene | 93.16 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 93.11 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 93.06 | |
| KOG1523 | 361 | consensus Actin-related protein Arp2/3 complex, su | 92.93 | |
| KOG4283 | 397 | consensus Transcription-coupled repair protein CSA | 92.93 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 92.9 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 92.79 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 92.78 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 92.75 | |
| KOG1920 | 1265 | consensus IkappaB kinase complex, IKAP component [ | 92.69 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 92.68 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 92.67 | |
| PLN02454 | 414 | triacylglycerol lipase | 92.61 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 92.6 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 92.45 | |
| KOG2110 | 391 | consensus Uncharacterized conserved protein, conta | 92.24 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 92.2 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 91.93 | |
| KOG0639 | 705 | consensus Transducin-like enhancer of split protei | 91.92 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 91.71 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 91.61 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 91.55 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 91.27 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 91.24 | |
| PLN02408 | 365 | phospholipase A1 | 91.13 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 90.92 | |
| PLN02571 | 413 | triacylglycerol lipase | 90.91 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 90.81 | |
| KOG2394 | 636 | consensus WD40 protein DMR-N9 [General function pr | 90.49 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 90.22 | |
| KOG2110 | 391 | consensus Uncharacterized conserved protein, conta | 90.04 | |
| KOG2048 | 691 | consensus WD40 repeat protein [General function pr | 89.88 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 89.81 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 89.78 | |
| PLN02324 | 415 | triacylglycerol lipase | 89.77 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 89.64 | |
| COG4247 | 364 | Phy 3-phytase (myo-inositol-hexaphosphate 3-phosph | 89.56 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 89.52 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 89.49 | |
| KOG1524 | 737 | consensus WD40 repeat-containing protein CHE-2 [Ge | 89.36 | |
| PLN00413 | 479 | triacylglycerol lipase | 89.34 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 89.24 | |
| PLN02802 | 509 | triacylglycerol lipase | 88.94 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 88.85 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 88.81 | |
| PLN02162 | 475 | triacylglycerol lipase | 88.42 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 88.34 | |
| PF09910 | 339 | DUF2139: Uncharacterized protein conserved in arch | 88.29 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 88.25 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 88.2 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 88.14 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 87.84 | |
| PLN02934 | 515 | triacylglycerol lipase | 87.66 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 87.5 | |
| PLN02761 | 527 | lipase class 3 family protein | 87.27 | |
| PLN02753 | 531 | triacylglycerol lipase | 87.23 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 87.17 | |
| KOG0650 | 733 | consensus WD40 repeat nucleolar protein Bop1, invo | 86.95 | |
| KOG0268 | 433 | consensus Sof1-like rRNA processing protein (conta | 86.57 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 86.56 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 86.27 | |
| PLN02310 | 405 | triacylglycerol lipase | 86.14 | |
| KOG2106 | 626 | consensus Uncharacterized conserved protein, conta | 85.99 | |
| KOG2048 | 691 | consensus WD40 repeat protein [General function pr | 85.79 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 85.7 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 85.28 | |
| KOG1538 | 1081 | consensus Uncharacterized conserved protein WDR10, | 85.27 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 85.25 | |
| KOG0290 | 364 | consensus Conserved WD40 repeat-containing protein | 84.86 | |
| PF05787 | 524 | DUF839: Bacterial protein of unknown function (DUF | 84.47 | |
| PLN02719 | 518 | triacylglycerol lipase | 84.24 | |
| PRK13614 | 573 | lipoprotein LpqB; Provisional | 84.05 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 83.99 | |
| PF15525 | 200 | DUF4652: Domain of unknown function (DUF4652) | 83.98 | |
| PRK13613 | 599 | lipoprotein LpqB; Provisional | 83.51 | |
| KOG4378 | 673 | consensus Nuclear protein COP1 [Signal transductio | 83.27 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 83.18 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 82.81 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 82.44 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 82.29 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 82.25 | |
| KOG1009 | 434 | consensus Chromatin assembly complex 1 subunit B/C | 81.01 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 80.52 | |
| KOG0307 | 1049 | consensus Vesicle coat complex COPII, subunit SEC3 | 80.25 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 80.24 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 80.2 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 80.14 |
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-69 Score=517.86 Aligned_cols=553 Identities=41% Similarity=0.651 Sum_probs=465.0
Q ss_pred eeeecccceeeeeccCCCceEEECCCC----CeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEE
Q 008274 8 LQTHGLAEYIAQEEMDRKTGYWWSLDS----KFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 83 (571)
Q Consensus 8 ~~~~g~~~~~~~~~~~~~~~~~wSPDg----~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 83 (571)
.+.+|+|.||-+||+++..++||||-+ .+|+|.-.|+.+++.+..+..... .++.+..+||+.|++|+++.|.
T Consensus 250 ~~saGVasyv~QEEfdR~~GyWW~p~s~~~~~rIlYeeVdesev~V~h~~s~~~~---~~~~d~~rYPrtGt~Nak~~Lk 326 (867)
T KOG2281|consen 250 AISAGVASYVVQEEFDRFEGYWWSPPSGLKILRILYEEVDESEVEVIHVPSPVLG---DRRVDSYRYPRTGTKNAKSTLK 326 (867)
T ss_pred hhhcCcchHHHHHHHHhhcceeecCCCCCceEEEEeeecChhheEEEeccCcccC---CCccccccCCcCCCCCceeeEE
Confidence 467899999999999999999999743 478887777777766555444333 2788899999999999999999
Q ss_pred EEECCC---CceEEEecc---CCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCce----------
Q 008274 84 VVSAAG---GPVSWMDLQ---CGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQR---------- 146 (571)
Q Consensus 84 ~~dl~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~---------- 146 (571)
++.+.+ |+...+.+. ++...++..-.|+..+.|.|||+ ..+...+|.|...+|.+++.+....
T Consensus 327 mv~~~~~~~gk~~~v~~kdlv~~~~~~f~~~EYI~Ragwtpdgkyvwvq~LdR~Q~~l~iilip~~~f~~~~dn~~~~~~ 406 (867)
T KOG2281|consen 327 MVEFENDAEGKIYDVPLKDLVQPFHCLFEDVEYIARAGWTPDGKYVWVQVLDRSQQRLQIILIPPTLFIPKEDNLQLRTD 406 (867)
T ss_pred EEEEeeccccceeccchhhcccccccccccceeeeeccccCCCcEEEEEEecCCcceeEEEEECHHHcCCccccHhhhhh
Confidence 888876 544433222 11124455558999999999999 5678899999999999999887654
Q ss_pred -----------EEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCC------------------
Q 008274 147 -----------KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDING------------------ 197 (571)
Q Consensus 147 -----------~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~------------------ 197 (571)
..|.+++.+.|++.+.+|.+.+.......-.|++.++..||+|||++....
T Consensus 407 ~~~~v~~~~~~~viyee~sd~winiHd~f~~~~~~~~e~~~~fi~asE~~~Frhly~its~lk~ng~~~s~~~~p~~~d~ 486 (867)
T KOG2281|consen 407 LNMGVPDDVSPEVIYEEPSDGWINIHDIFHPLPQSTHEASYPFIWASEETGFRHLYLITSLLKPNGYCLSLGSAPLDQDF 486 (867)
T ss_pred hhhcCCcCCCcceEEecCCCceEEhhhcccccccCCccceeeEEEecccccceEEEEEEeecccCCCcccccCCcccccc
Confidence 567788888999999999998865432333489999999999999987433
Q ss_pred ----ceeeceeecCeEEEEE--EEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCC
Q 008274 198 ----TCLGPITEGDWMVEQI--VGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNM 271 (571)
Q Consensus 198 ----~~~~~lT~~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g 271 (571)
++...||+|+|++... .+++.-.+.+||.++.++|.+.|||.+.+...| ...+||...-.+.+.++.+.
T Consensus 487 ~c~i~ee~altSgeweVl~r~Gi~VdE~~~LVYf~gt~d~PlE~hLyvvsye~~g-----~~~rlt~~g~sh~~~l~~~~ 561 (867)
T KOG2281|consen 487 KCRIKEEIALTSGEWEVLARHGIWVDEVRKLVYFVGTKDTPLEHHLYVVSYENPG-----EIARLTEPGYSHSCELDQQC 561 (867)
T ss_pred cCcchhheeecccceeehhhcCeeecccceEEEEEccCCCCceeeEEEEEEecCC-----ceeeccCCCcccchhhhhhh
Confidence 2357789999998543 347888899999999999999999999994233 67788876656777888999
Q ss_pred CEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhcc-----CCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCC
Q 008274 272 RNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKR-----LQLEPPDIVQIQANDGTVLYGALYKPDESRYGP 346 (571)
Q Consensus 272 ~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~ 346 (571)
+.++..+++...||...++.+...+..... ........+.. -.+..++.+.|++..|..+.+.+|+|.+.+++
T Consensus 562 d~fv~~~~sv~sP~cv~~y~ls~~~~~~l~-~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~pg- 639 (867)
T KOG2281|consen 562 DHFVSYYSSVGSPPCVSLYSLSWPENDPLP-KQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQPG- 639 (867)
T ss_pred hhHhhhhhcCCCCceEEEEeccCCccCccc-chhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccCCCC-
Confidence 999999999999999999988665542222 11111222222 23344577888998899999999999987655
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
+|+|+|++++|||+.|.+.++|...-......|+++||+|+.+|.||+..+|..|+..+..++|..+++|..+++++|++
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Lae 719 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAE 719 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHH
Confidence 67999999999999999999998766667789999999999999999999999999999999999999999999999999
Q ss_pred c-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCC
Q 008274 427 Q-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK 505 (571)
Q Consensus 427 ~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~ 505 (571)
+ +++|.+||+|.|||||||++++.++++|+.|+++|+++|+++|..|+..|.|+|||.|..+...|.+.|...++.++.
T Consensus 720 q~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERYMg~P~~nE~gY~agSV~~~Veklp 799 (867)
T KOG2281|consen 720 QTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERYMGYPDNNEHGYGAGSVAGHVEKLP 799 (867)
T ss_pred hcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhhcCCCccchhcccchhHHHHHhhCC
Confidence 8 589999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred ---CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 506 ---GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 506 ---~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
..+||+||.-|++|++.+...+..+|.++|++.++++||++.|++..++..+....+++.|++++
T Consensus 800 depnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 800 DEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQEN 867 (867)
T ss_pred CCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhhC
Confidence 46999999999999999999999999999999999999999999988888999999999999863
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-59 Score=495.51 Aligned_cols=543 Identities=28% Similarity=0.457 Sum_probs=455.8
Q ss_pred eeecccceeeeecc-CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEEC
Q 008274 9 QTHGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSA 87 (571)
Q Consensus 9 ~~~g~~~~~~~~~~-~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl 87 (571)
|+||++||+||||+ ....++||||||.++||...+++.++.+.++.+.++..| +....++|+++|.+||.+.|+++|+
T Consensus 192 i~ng~~Dw~yeeEv~~~~~a~wwsp~g~~la~~~~~dt~V~~~~~~~~~~~~~y-p~~~~~~ypk~g~~np~v~l~v~~~ 270 (755)
T KOG2100|consen 192 IFNGKPDWIYEEEVLSSDSAIWWSPDGDRLAYASFNDTKVETINLPGYTDDDQY-PKSTNFHYPKAGAPNPAVSLFVVDL 270 (755)
T ss_pred EEcCCCCceeehhhcccCccceeCCCCceeEEEEecccccceEEeccccccccC-cccceeecCCCCCCCCeEEEEEEeC
Confidence 89999999999887 568999999999999999999999999999998887324 7788999999999999999999996
Q ss_pred CCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-CeeeccCCccc
Q 008274 88 AGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVNLHDCFTP 166 (571)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~~~~~~~~ 166 (571)
.......+.. .......+.++..+.|..+.+.++.+.+|.++...+-.||.. +.++........ +|+..+.. .+
T Consensus 271 ~~~~~~~~~~---~~~~~~~~~~~~~~~W~~~~~~~~~~~~r~~~~~~~~~cd~~-~~~~~~~~~~~~~~W~~~~~~-~~ 345 (755)
T KOG2100|consen 271 HDPPRLGIPP---PTNQRSGEYYVTNVKWDTTEKVLVVWTNREQNISVETLCDTP-GICRVVYEESSDGGWVEHQNV-EP 345 (755)
T ss_pred CCceeeccCC---ccccccCceEEEEEEEecCccEEEEEEccCCCeeeeEEecCc-ccceeeEeccccccccccccc-cc
Confidence 6554332111 012234578999999999999999999999999999999999 777666555555 48865430 11
Q ss_pred CCCCCccCCCe-EEEEEecCC-ccEEEEEeCCCc-eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeC
Q 008274 167 LDKGVTKYSGG-FIWASEKTG-FRHLYLHDINGT-CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLY 243 (571)
Q Consensus 167 ~~~~~~~~~d~-~~~~s~~~g-~~~l~~~~~~~~-~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~ 243 (571)
. ..++... +++.+...+ +.|+..+...++ ....||.+.|++..+..++.+++.+||.+...++..+++|++++
T Consensus 346 ~---~~~d~~~~~~~~~~~~~~~~hi~~~~~~~~~~~~~lt~g~w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~- 421 (755)
T KOG2100|consen 346 V---FSSDGSSYLKVDSVSDGGYNHIAYLKLSNGSEPRMLTSGNWEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISL- 421 (755)
T ss_pred e---EeecCCceeEEEeeccCCEEEEEEEEcCCCCccccccccceEEEEeccccCCCceEEEEecCCCCCceEEEEEEc-
Confidence 1 0122223 444556655 999988887776 78899999999998888998999999999999888999999998
Q ss_pred CCCCCCCCCCeEecCCC-----ceEEEEECCCCCEEEEEeeCCCCCCE-EEEEEcCCCceeEeccCCCCChhhhccCCCC
Q 008274 244 PDWNHTLEAPVKLTNGK-----GKHVAVLDHNMRNFVDFHDSLDSPPR-ILLCSLQDGSLVLPLYEQPLTVPRIKRLQLE 317 (571)
Q Consensus 244 ~~g~~~~~~~~~lt~~~-----g~~~~~~s~~g~~~v~~~s~~~~p~~-l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 317 (571)
+.. ....+|+.. ...++++++..++++..++.+..|.. +-+....+......|..+......+....++
T Consensus 422 -~~~----~~~~lt~~~~~~~~~~~~~~~~~~~~~~v~~~~gP~~p~~~~~~~~~~~~~~~~~Le~n~~~~~~~~~~~~p 496 (755)
T KOG2100|consen 422 -GSG----TVESLTCSLITGPCTYLSVSFSKSAKYYVLSCSGPKVPDGQLTRHSSKNSKTIVVLETNEELKKTIENVALP 496 (755)
T ss_pred -ccc----ccccccccCCCCcceEEEEecCCcccEEEEEccCCCCCcceeeccccccceEEEEeccChhhHHHhhcccCC
Confidence 332 334466543 24466888889999999988776643 2222332333356788887788888878888
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+...+.. +|....+.+..|++.. ..+++|+|+.+||||+++.+...|...|. ...+...|++|+.+|+||++++
T Consensus 497 ~~~~~~i~~-~~~~~~~~~~lP~~~~-~~~kyPllv~~yGGP~sq~v~~~~~~~~~--~~~~s~~g~~v~~vd~RGs~~~ 572 (755)
T KOG2100|consen 497 IVEFGKIEI-DGITANAILILPPNFD-PSKKYPLLVVVYGGPGSQSVTSKFSVDWN--EVVVSSRGFAVLQVDGRGSGGY 572 (755)
T ss_pred cceeEEEEe-ccEEEEEEEecCCCCC-CCCCCCEEEEecCCCCcceeeeeEEecHH--HHhhccCCeEEEEEcCCCcCCc
Confidence 888888887 8899999999999874 34699999999999999888888877664 3467789999999999999999
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC-CeeEEEEEcCccCCcccccch
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP-DVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~ 476 (571)
|..+..+.++++|..+++|++.+++++.+.+++|.+||+|+|+|+||++++.++...+ +.|+|+++++|+++|..++..
T Consensus 573 G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~ 652 (755)
T KOG2100|consen 573 GWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDST 652 (755)
T ss_pred chhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeeccc
Confidence 9999999999999999999999999999999999999999999999999999999887 889999999999999999999
Q ss_pred hhhhhcCCCCCChhhhccCCcchhhccCCCcE-EEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCc
Q 008274 477 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKL-LLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRD 555 (571)
Q Consensus 477 ~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~-lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 555 (571)
+.++++|.|.++...|.+.++...+..++.|. |++||+.|.+|+++++..++++|+.+|+++++.+||+++|++.....
T Consensus 653 ~terymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~ 732 (755)
T KOG2100|consen 653 YTERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEV 732 (755)
T ss_pred ccHhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccc
Confidence 99999999999888899999999999999766 99999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHh
Q 008274 556 RIYMEERIWEFIERT 570 (571)
Q Consensus 556 ~~~~~~~i~~fl~~~ 570 (571)
...++..+..||..+
T Consensus 733 ~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 733 ISHLYEKLDRFLRDC 747 (755)
T ss_pred hHHHHHHHHHHHHHH
Confidence 899999999999865
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-46 Score=395.12 Aligned_cols=498 Identities=24% Similarity=0.294 Sum_probs=346.5
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCC-CeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEI-PRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGG 101 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~ 101 (571)
...+...|||+|+++++........ ... +. .....+.+-..+....+..++++|..+ ....+
T Consensus 101 ~~v~~~~~~~~g~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~g~~~~~l~~~d~~~-~~~~~------ 163 (620)
T COG1506 101 FGVSDARWSPDGDRIAFLTAEGASKRDGG-------DH---LFVDRLPVWFDGRGGERSDLYVVDIES-KLIKL------ 163 (620)
T ss_pred cccccceeCCCCCeEEEEecccccccCCc-------ee---eeecccceeecCCCCcccceEEEccCc-ccccc------
Confidence 3467788999999999943221110 000 00 111122222233333456889999887 22222
Q ss_pred CCCCCCCceeEEEEEccCCeEEEEEEeccC--c-cEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeE
Q 008274 102 TDQNYDEEYLARVNWMHGNILTAQVLNRSQ--T-KLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGF 178 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg~~i~~~~~r~~--~-~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~ 178 (571)
......+..+.|.+|++.++......+ . ....+.....++....++..... . ....+.+ ++..+
T Consensus 164 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~-------~gk~~ 230 (620)
T COG1506 164 ---GLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGELESLTPGEGS--I-SKLAFDA-------DGKSI 230 (620)
T ss_pred ---cCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCceEEEcCCCce--e-eeeeeCC-------CCCee
Confidence 123445555667777776665544443 1 12233333356665555443211 0 0000111 12224
Q ss_pred EEEEecC--Cc---cEEEEEeCCCceeec-eeecC--eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCC
Q 008274 179 IWASEKT--GF---RHLYLHDINGTCLGP-ITEGD--WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTL 250 (571)
Q Consensus 179 ~~~s~~~--g~---~~l~~~~~~~~~~~~-lT~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~ 250 (571)
.+..... |+ ..+++++.+.+.... +...+ +..... ...-++..++|.+.... ....++.+.. .+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-g~~~l~~~~~--~~~--- 303 (620)
T COG1506 231 ALLGTESDRGLAEGDFILLLDGELGEVDGDLSSGDDTRGAWAV-EGGLDGDGLLFIATDGG-GSSPLFRVDD--LGG--- 303 (620)
T ss_pred EEeccCCccCccccceEEEEeccccccceeeccCCcccCcHHh-ccccCCCcEEEEEecCC-CceEEEEEec--cCC---
Confidence 4443331 32 445555522222222 11111 111111 12246777888887743 2477777764 222
Q ss_pred CCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEcCCCc
Q 008274 251 EAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGT 330 (571)
Q Consensus 251 ~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~ 330 (571)
. ..+...+......++.+++.+++.++++..||++|+.+. +++.+.+.. ....+.+..+.+++.++++..||.
T Consensus 304 -~-~~~~~~~~~~v~~f~~~~~~~~~~~s~~~~p~~i~~~~~--~~~~~~~~~---~~~~~~~~~~~~~e~~~~~~~dG~ 376 (620)
T COG1506 304 -G-VEGLSGDDGGVPGFDVDGRKLALAYSSPTEPPEIYLYDR--GEEAKLTSS---NNSGLKKVKLAEPEPVTYKSNDGE 376 (620)
T ss_pred -c-eeeecCCCceEEEEeeCCCEEEEEecCCCCccceEEEcC--CCceEEeec---ccccccccccCCceEEEEEcCCCC
Confidence 2 222223323334566699999999999999999999986 333333333 334556688999999999999999
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCC
Q 008274 331 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCG 410 (571)
Q Consensus 331 ~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~ 410 (571)
+++++++.|.+.+. .+++|+||++||||..+.. ..+....+.|+++||+|+.+|+||++++|++|......+++
T Consensus 377 ~i~~~l~~P~~~~~-~k~yP~i~~~hGGP~~~~~-----~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g 450 (620)
T COG1506 377 TIHGWLYKPPGFDP-RKKYPLIVYIHGGPSAQVG-----YSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWG 450 (620)
T ss_pred EEEEEEecCCCCCC-CCCCCEEEEeCCCCccccc-----cccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccC
Confidence 99999999998643 3569999999999977652 24556789999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCC-----
Q 008274 411 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLP----- 485 (571)
Q Consensus 411 ~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~----- 485 (571)
..+++|+.++++++.+++.+|++|++|+|+||||+|+++++.+.| +|+|+++.+++++|..+...+.+.+.+.+
T Consensus 451 ~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (620)
T COG1506 451 GVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGG 529 (620)
T ss_pred CccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcCCHHHhCC
Confidence 999999999999999999999999999999999999999999776 89999999999888766555444433222
Q ss_pred --CCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHH
Q 008274 486 --SEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 563 (571)
Q Consensus 486 --~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i 563 (571)
..+.+.|.+.||+.+++++++|+|||||+.|.+||++++++|+++|+.+|+++++++||+++|++..+++....++++
T Consensus 530 ~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~ 609 (620)
T COG1506 530 GPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEI 609 (620)
T ss_pred CcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHH
Confidence 115678999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred HHHHHHhC
Q 008274 564 WEFIERTL 571 (571)
Q Consensus 564 ~~fl~~~l 571 (571)
++||+++|
T Consensus 610 ~~~~~~~~ 617 (620)
T COG1506 610 LDWFKRHL 617 (620)
T ss_pred HHHHHHHh
Confidence 99999985
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=382.32 Aligned_cols=482 Identities=16% Similarity=0.157 Sum_probs=336.5
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||++|||. .+..+.+. .+|++.|+++|+...-.+
T Consensus 129 l~~~~~Spdg~~la~~-~d~~G~E~------------------------------~~l~v~d~~tg~~l~~~i------- 170 (686)
T PRK10115 129 LGGMAITPDNTIMALA-EDFLSRRQ------------------------------YGIRFRNLETGNWYPELL------- 170 (686)
T ss_pred EeEEEECCCCCEEEEE-ecCCCcEE------------------------------EEEEEEECCCCCCCCccc-------
Confidence 4567899999999996 44333222 468999999886322111
Q ss_pred CCCCceeEEEEEccCCeEEEEEEecc--CccEEEEEEECCCC--ceEEEEEeecCC-ee----eccCCcccC--------
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRS--QTKLKVLKFDIKTG--QRKVILVEELDS-WV----NLHDCFTPL-------- 167 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~--~~~~~i~~~d~~~g--~~~~l~~~~~~~-w~----~~~~~~~~~-------- 167 (571)
. ... ..+.|++||+.+++..++. ....+||+.++.|+ +.+.|.++.+.. |. .....+...
T Consensus 171 ~-~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~ 247 (686)
T PRK10115 171 D-NVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTS 247 (686)
T ss_pred c-Ccc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccc
Confidence 1 112 4589999999777766643 24568999999999 556666543221 11 000000000
Q ss_pred --------------------CCCC----ccCCCeEEEEEecC-CccEEEEEeCC-Cceeeceeec--CeEEEEEEEEeec
Q 008274 168 --------------------DKGV----TKYSGGFIWASEKT-GFRHLYLHDIN-GTCLGPITEG--DWMVEQIVGVNEA 219 (571)
Q Consensus 168 --------------------~~~~----~~~~d~~~~~s~~~-g~~~l~~~~~~-~~~~~~lT~~--~~~~~~~~~~s~d 219 (571)
.... ....+.+++.++.+ ....|+.+++. .++.+.|... +..+.++. ++
T Consensus 248 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~-~~-- 324 (686)
T PRK10115 248 EVLLLDAELADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFT-LF-- 324 (686)
T ss_pred cEEEEECcCCCCCceEEEECCCCCEEEEEeCCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEE-EE--
Confidence 0000 00011233334332 24456666654 2333444333 33455443 43
Q ss_pred CcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec-CCCceE-EEEEC--CCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 220 SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-NGKGKH-VAVLD--HNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 220 g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt-~~~g~~-~~~~s--~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
++.|++....++. .+++.+++ ++. ....|+ ..+... ....+ +++..+++.++++.+|+.+|.+++.++
T Consensus 325 ~~~l~~~~~~~g~--~~l~~~~~--~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~ 396 (686)
T PRK10115 325 TDWLVVEERQRGL--TSLRQINR--KTR----EVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTG 396 (686)
T ss_pred CCEEEEEEEeCCE--EEEEEEcC--CCC----ceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCC
Confidence 6789999888874 77888887 443 455665 333222 22334 566789999999999999999998665
Q ss_pred ceeEeccCCCCChhhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhh
Q 008274 296 SLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMR 375 (571)
Q Consensus 296 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~ 375 (571)
+ .+.|.... .+.++...+ .++.+.+++.||.+|+++++.+++. ..+++.|+||++|||++.+. .+.|...
T Consensus 397 ~-~~~l~~~~--~~~~~~~~~-~~e~v~~~s~DG~~Ip~~l~~~~~~-~~~~~~P~ll~~hGg~~~~~-----~p~f~~~ 466 (686)
T PRK10115 397 E-RRVLKQTE--VPGFDAANY-RSEHLWITARDGVEVPVSLVYHRKH-FRKGHNPLLVYGYGSYGASI-----DADFSFS 466 (686)
T ss_pred c-EEEEEecC--CCCcCcccc-EEEEEEEECCCCCEEEEEEEEECCC-CCCCCCCEEEEEECCCCCCC-----CCCccHH
Confidence 4 45555432 223444444 8899999999999999965554332 22356799999999998764 3345556
Q ss_pred hHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC
Q 008274 376 AQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP 455 (571)
Q Consensus 376 ~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~ 455 (571)
.+.|+++||+|+.+|+||++++|+.|..+.....+..+++|+++++++|++++++|++|++++|.|+||+++.+++.++|
T Consensus 467 ~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~P 546 (686)
T PRK10115 467 RLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRP 546 (686)
T ss_pred HHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcCh
Confidence 78899999999999999999999999998888888889999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEcCccCCccccc-----c-hhhh-hhcCCCCCC--hhhhccCCcchhhccCCCc-EEEEecCCCCCCChHHHH
Q 008274 456 DVFQCAVSGAPVTSWDGYD-----T-FYTE-KYMGLPSED--PVGYEYSSVMHHVHKMKGK-LLLVHGMIDENVHFRHTA 525 (571)
Q Consensus 456 ~~~~~~v~~~~~~~~~~~~-----~-~~~~-~~~g~~~~~--~~~~~~~s~~~~~~~~~~p-~lli~G~~D~~v~~~~~~ 525 (571)
++|+|+|+..|+.|+..+. . ...+ ...|.|++. .+.+.+.||+.++++++.| +||+||++|.+||+.++.
T Consensus 547 dlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~ 626 (686)
T PRK10115 547 ELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPA 626 (686)
T ss_pred hheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHH
Confidence 9999999999999986431 1 1111 223777643 2345679999999999988 677799999999999999
Q ss_pred HHHHHHHHcCCCeeEEEc---CCCCCCCCCCCcHHH---HHHHHHHHHHHh
Q 008274 526 RLINALVAARKPYEILIF---PDERHMPRRHRDRIY---MEERIWEFIERT 570 (571)
Q Consensus 526 ~~~~~l~~~~~~~~~~~~---~~~~H~~~~~~~~~~---~~~~i~~fl~~~ 570 (571)
+|+++|++++.+.+++++ +++||+. ..++.. .....+.|+-..
T Consensus 627 k~~a~Lr~~~~~~~~vl~~~~~~~GHg~--~~~r~~~~~~~A~~~aFl~~~ 675 (686)
T PRK10115 627 KWVAKLRELKTDDHLLLLCTDMDSGHGG--KSGRFKSYEGVAMEYAFLIAL 675 (686)
T ss_pred HHHHHHHhcCCCCceEEEEecCCCCCCC--CcCHHHHHHHHHHHHHHHHHH
Confidence 999999999999888888 9999984 233333 333446666543
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=328.06 Aligned_cols=264 Identities=36% Similarity=0.605 Sum_probs=217.8
Q ss_pred eeeecccceeeeec-cCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCC-CCCCcccccCCCCCCCCceEEEEEE
Q 008274 8 LQTHGLAEYIAQEE-MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSV-GSEAQEDHAYPFAGASNVKVRLGVV 85 (571)
Q Consensus 8 ~~~~g~~~~~~~~~-~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~y~~~g~~~~~~~l~~~ 85 (571)
.|+||+|||||||| +.+..++||||||++|||.+.|++.++.+.++.+..... | |....++||++|++|+.+.|+++
T Consensus 85 ~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~y-p~~~~~~YPk~G~~np~v~l~v~ 163 (353)
T PF00930_consen 85 GIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQY-PEVESIRYPKAGDPNPRVSLFVV 163 (353)
T ss_dssp TEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS--EEEEEE--BTTS---EEEEEEE
T ss_pred eEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccC-CcccccccCCCCCcCCceEEEEE
Confidence 57899999999999 678999999999999999999999999999999987642 3 78899999999999999999999
Q ss_pred ECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCc
Q 008274 86 SAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCF 164 (571)
Q Consensus 86 dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~ 164 (571)
|+++++.+.++... .+...+.++..+.|++|++ +++.+++|.|+..+|+.||+++|+++.+.++...+|++....+
T Consensus 164 ~~~~~~~~~~~~~~---~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~ 240 (353)
T PF00930_consen 164 DLASGKTTELDPPN---SLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPP 240 (353)
T ss_dssp ESSSTCCCEE---H---HHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEE
T ss_pred ECCCCcEEEeeecc---ccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeeccc
Confidence 99999887665420 0124688999999999999 8889999999999999999999999999988888998654433
Q ss_pred ccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCC
Q 008274 165 TPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYP 244 (571)
Q Consensus 165 ~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~ 244 (571)
.+. ..++++|+++++++|+.|||+++.+++..++||.|+|++.++..|+++++.|||+++.++|.++|||++++
T Consensus 241 ~~~----~~~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~-- 314 (353)
T PF00930_consen 241 HFL----GPDGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSL-- 314 (353)
T ss_dssp EE-----TTTSSEEEEEEETTSSEEEEEEETTSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEET--
T ss_pred ccc----cCCCCEEEEEEEcCCCcEEEEEcccccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEe--
Confidence 332 12455699999999999999999999999999999999988889999999999999998899999999999
Q ss_pred C-CCCCCCCCeEecCCCceE-EEEECCCCCEEEEEeeCCCCCC
Q 008274 245 D-WNHTLEAPVKLTNGKGKH-VAVLDHNMRNFVDFHDSLDSPP 285 (571)
Q Consensus 245 ~-g~~~~~~~~~lt~~~g~~-~~~~s~~g~~~v~~~s~~~~p~ 285 (571)
+ +. .++|||+..+.+ .+++||+|++++..+++++.||
T Consensus 315 ~~~~----~~~~LT~~~~~~~~~~~Spdg~y~v~~~s~~~~P~ 353 (353)
T PF00930_consen 315 DSGG----EPKCLTCEDGDHYSASFSPDGKYYVDTYSGPDTPP 353 (353)
T ss_dssp TETT----EEEESSTTSSTTEEEEE-TTSSEEEEEEESSSSCE
T ss_pred CCCC----CeEeccCCCCCceEEEECCCCCEEEEEEcCCCCCC
Confidence 5 44 789999988777 8899999999999999999885
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=263.94 Aligned_cols=482 Identities=18% Similarity=0.150 Sum_probs=334.4
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.+..++..|||++.+||. .|..+.+.| .|.+.|+++|+...-.+
T Consensus 129 ~~Lg~~~~s~D~~~la~s-~D~~G~e~y------------------------------~lr~kdL~tg~~~~d~i----- 172 (682)
T COG1770 129 FSLGAASISPDHNLLAYS-VDVLGDEQY------------------------------TLRFKDLATGEELPDEI----- 172 (682)
T ss_pred eeeeeeeeCCCCceEEEE-EecccccEE------------------------------EEEEEecccccccchhh-----
Confidence 345667889999999994 555554443 57899999998654433
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccC-ccEEEEEEECCC--CceEEEEEeecCCeeeccCCcccCCCCCccCCCeEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQ-TKLKVLKFDIKT--GQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFI 179 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~-~~~~i~~~d~~~--g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~ 179 (571)
......++|.+|++.+.+...+.. ....|++..+.+ .+.+.|.++.+..|.= .+. ..+++.++
T Consensus 173 -----~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~~~d~lvyeE~d~~f~~------~v~---~s~s~~yi 238 (682)
T COG1770 173 -----TNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPGSSDELVYEEKDDRFFL------SVG---RSRSEAYI 238 (682)
T ss_pred -----cccccceEEecCCCeEEEEEEcCCCCcceEEEEecCCCCCcceEEEEcCCCcEEE------Eee---eccCCceE
Confidence 223456899999997777766554 455899999998 7778888887775431 111 11334466
Q ss_pred EEEe-cCCccEEEEEeCCCce--eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC-------CC
Q 008274 180 WASE-KTGFRHLYLHDINGTC--LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN-------HT 249 (571)
Q Consensus 180 ~~s~-~~g~~~l~~~~~~~~~--~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~-------~~ 249 (571)
+++. ..--.++++++.+... ++.+..-.-.+ .......++..|+.+|.++ .+..|++..+..+.. ++
T Consensus 239 ~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~--eY~~eh~~d~f~i~sN~~g-knf~l~~ap~~~~~~~w~~~I~h~ 315 (682)
T COG1770 239 VISLGSHITSEVRLLDADDPEAEPKVVLPRENGV--EYSVEHGGDRFYILSNADG-KNFKLVRAPVSADKSNWRELIPHR 315 (682)
T ss_pred EEEcCCCcceeEEEEecCCCCCceEEEEEcCCCc--EEeeeecCcEEEEEecCCC-cceEEEEccCCCChhcCeeeeccC
Confidence 6554 3345788888865543 33333211111 1234556889999999888 478888876511100 00
Q ss_pred -----------------------CCCCeEecCCCc-e---------EEE--EE--CCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 250 -----------------------LEAPVKLTNGKG-K---------HVA--VL--DHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 250 -----------------------~~~~~~lt~~~g-~---------~~~--~~--s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
+...+.....++ . .+. +. ..+...+.+.+++.++|..++-+++
T Consensus 316 ~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~~~~~i~f~~~ay~~~l~~~~e~~s~~lR~~ysS~ttP~~~~~~dm 395 (682)
T COG1770 316 EDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKTGEERGIAFDDEAYSAGLSGNPEFDSDRLRYSYSSMTTPATLFDYDM 395 (682)
T ss_pred CCceeeeeeeeccEEEEEecccCCceEEEEecCCCceeeEEecchhhhccccCCCCCCCccEEEEeecccccceeEEeec
Confidence 001111111011 0 011 11 2356678899999999999999999
Q ss_pred CCCceeEeccCCCCChhhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccc
Q 008274 293 QDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTV 372 (571)
Q Consensus 293 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~ 372 (571)
.+++. ++...+.....+++..+ ..+.+..+..||.+++..++.-.+. ..+++.|++++.+|..+... ... |
T Consensus 396 ~t~er--~~LkqqeV~~g~dp~~Y-~s~riwa~a~dgv~VPVSLvyrkd~-~~~g~~p~lLygYGaYG~s~-~p~----F 466 (682)
T COG1770 396 ATGER--TLLKQQEVPGGFDPEDY-VSRRIWATADDGVQVPVSLVYRKDT-KLDGSAPLLLYGYGAYGISM-DPS----F 466 (682)
T ss_pred cCCcE--EEEEeccCCCCCChhHe-EEEEEEEEcCCCcEeeEEEEEeccc-CCCCCCcEEEEEeccccccC-CcC----c
Confidence 88873 34443333333555455 5678888889999999998877653 23467899999999877654 233 3
Q ss_pred hhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 373 DMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 373 ~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+...-.|.++|++......||.|.-|..|...+........+.|++++.++|.++++.+.++|+++|.|+||.++..++.
T Consensus 467 s~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N 546 (682)
T COG1770 467 SIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVAN 546 (682)
T ss_pred ccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHh
Confidence 34456788999999999999999999999998887777888999999999999999999999999999999999999999
Q ss_pred cCCCeeEEEEEcCccCCccc---------ccchhhhhhcCCCCCChh---hhccCCcchhhccCC-CcEEEEecCCCCCC
Q 008274 453 RFPDVFQCAVSGAPVTSWDG---------YDTFYTEKYMGLPSEDPV---GYEYSSVMHHVHKMK-GKLLLVHGMIDENV 519 (571)
Q Consensus 453 ~~~~~~~~~v~~~~~~~~~~---------~~~~~~~~~~g~~~~~~~---~~~~~s~~~~~~~~~-~p~lli~G~~D~~v 519 (571)
+.|++|+++|+..|+.|-.. ....|.|+ |.|. +++ ..+.+||+.++..-. +|+|++.|..|.+|
T Consensus 547 ~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EW--GNP~-d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV 623 (682)
T COG1770 547 MAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEW--GNPL-DPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRV 623 (682)
T ss_pred hChhhhhheeecCCccchhhhhcCCCCCCCccchhhh--CCcC-CHHHHHHHhhcCchhccccCCCCceEEEccccCCcc
Confidence 99999999999999987421 12233333 7776 443 447889999887754 68999999999999
Q ss_pred ChHHHHHHHHHHHHcCC---CeeEEEcCCCCCCC-CCCCcHHHHHHHHHHHHHH
Q 008274 520 HFRHTARLINALVAARK---PYEILIFPDERHMP-RRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 520 ~~~~~~~~~~~l~~~~~---~~~~~~~~~~~H~~-~~~~~~~~~~~~i~~fl~~ 569 (571)
...+..++.++|+.... ++-+..=-++||+- +..-....-...-..|+.+
T Consensus 624 ~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~lee~A~eYaF~l~ 677 (682)
T COG1770 624 QYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQRLEEIAFEYAFLLK 677 (682)
T ss_pred ccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHHHHHHHHHHHHHhh
Confidence 99999999999998764 34444546789974 3322233333333445543
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=256.70 Aligned_cols=199 Identities=36% Similarity=0.542 Sum_probs=177.0
Q ss_pred hhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 373 DMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 373 ~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+...++|+++||+|+.+|+||++++|.+|......+++..+++|+.++++++++++.+|++||+|+|+|+||++++.++.
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 34578999999999999999999999999998888888889999999999999999999999999999999999999999
Q ss_pred cCCCeeEEEEEcCccCCcccccch---hhh-hhc--CCCCCChhhhccCCcchhhcc--CCCcEEEEecCCCCCCChHHH
Q 008274 453 RFPDVFQCAVSGAPVTSWDGYDTF---YTE-KYM--GLPSEDPVGYEYSSVMHHVHK--MKGKLLLVHGMIDENVHFRHT 524 (571)
Q Consensus 453 ~~~~~~~~~v~~~~~~~~~~~~~~---~~~-~~~--g~~~~~~~~~~~~s~~~~~~~--~~~p~lli~G~~D~~v~~~~~ 524 (571)
++|++|+++++.+|+.++..+... +.. ++. +.+..+.+.|...+|+..+.+ +++|+||+||++|.+||++++
T Consensus 84 ~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s 163 (213)
T PF00326_consen 84 QHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQS 163 (213)
T ss_dssp HTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHH
T ss_pred ccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHH
Confidence 999999999999999997655432 333 222 566667888989999999999 889999999999999999999
Q ss_pred HHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 525 ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 525 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.+++++|+++|+++++++||+++|++...++...+.+++++||+++|
T Consensus 164 ~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 164 LRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999888888899999999999986
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-26 Score=223.93 Aligned_cols=292 Identities=20% Similarity=0.231 Sum_probs=239.6
Q ss_pred EECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCC
Q 008274 266 VLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYG 345 (571)
Q Consensus 266 ~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~ 345 (571)
+-+-+|+.+.+.+.+.++|+.+++.++..+ +++.+.. ....++...+ .++++..++.||.+|++++.. ++.+.
T Consensus 346 ~~~~~g~ev~l~~t~F~tP~~~~r~~~~~~-eLe~ik~---~p~~FDa~~~-~veQ~~atSkDGT~IPYFiv~-K~~~~- 418 (648)
T COG1505 346 SADKDGDEVFLAFTSFTTPSTLYRLDLFGG-ELEVIRE---QPVQFDADNY-EVEQFFATSKDGTRIPYFIVR-KGAKK- 418 (648)
T ss_pred cCCCCCcEEEEEeecccCCCceEEEecCCc-eehhhhh---ccCCcCccCc-eEEEEEEEcCCCccccEEEEe-cCCcC-
Confidence 344578889999999999999999998444 4555544 2334554455 678888899999999999998 65422
Q ss_pred CCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 346 PPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 346 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
+ +.|++|+-|||..... .+.|......+.++|.+.+..|.||.|.+|.+|+.+......+..++|+.++++.|+
T Consensus 419 d-~~pTll~aYGGF~vsl-----tP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi 492 (648)
T COG1505 419 D-ENPTLLYAYGGFNISL-----TPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLI 492 (648)
T ss_pred C-CCceEEEecccccccc-----CCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHH
Confidence 2 6799999999876654 244455567888999999999999999999999999988888899999999999999
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch-----hhhhhcCCCCC--ChhhhccCCcc
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF-----YTEKYMGLPSE--DPVGYEYSSVM 498 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~g~~~~--~~~~~~~~s~~ 498 (571)
++++..+++++|.|.|-||.++..++.++|++|.|+++..|+.|+..|... |...| |.|.. +.....++||+
T Consensus 493 ~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EY-G~Pd~P~d~~~l~~YSPy 571 (648)
T COG1505 493 KRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEY-GNPDDPEDRAFLLAYSPY 571 (648)
T ss_pred HhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhhHhhc-CCCCCHHHHHHHHhcCch
Confidence 999999999999999999999999999999999999999999999877543 44444 66654 23456789999
Q ss_pred hhhccCC--CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcH-HHHHHHHHHHHHHhC
Q 008274 499 HHVHKMK--GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR-IYMEERIWEFIERTL 571 (571)
Q Consensus 499 ~~~~~~~--~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~i~~fl~~~l 571 (571)
++++.-+ +|+||..+..|.+|+|.++.+|+.+|++.+.++-+.+--++||+-..+... ......++.||.+.|
T Consensus 572 ~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 572 HNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred hcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 9887743 699999999999999999999999999999999988888999987544433 445666788888765
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-25 Score=220.62 Aligned_cols=293 Identities=18% Similarity=0.215 Sum_probs=223.5
Q ss_pred CCCEEEEEeeCCCCCCEEEEEEcCCCcee-EeccCCCCChhhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCC
Q 008274 270 NMRNFVDFHDSLDSPPRILLCSLQDGSLV-LPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPP 348 (571)
Q Consensus 270 ~g~~~v~~~s~~~~p~~l~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~ 348 (571)
+.+.+.|.++|+-+|+.||.+++..++.. +.+.+.....+.+....+ ..+++.+++.||..++..++.-+.. ..+++
T Consensus 392 ~~~~~~f~~sS~l~P~~iy~yDl~~~~~e~~vf~e~~~~lpg~~~s~y-~~~r~~~~SkDGt~VPM~Iv~kk~~-k~dg~ 469 (712)
T KOG2237|consen 392 KSSTIRFQFSSFLTPGSIYDYDLANGKPEPSVFREITVVLPGFDASDY-VVERIEVSSKDGTKVPMFIVYKKDI-KLDGS 469 (712)
T ss_pred CCceEEEEEeccCCCCeEEEeeccCCCCCCcceeeeccccCcccccce-EEEEEEEecCCCCccceEEEEechh-hhcCC
Confidence 45678899999999999999999777321 112222222344443333 6788999999999999998885443 23357
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|++|+.||+.+... ..+|.. ....|..+|++.+..|.||.|++|..|+..+.....++.++|++++++||++++
T Consensus 470 ~P~LLygYGay~isl-~p~f~~----srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~g 544 (712)
T KOG2237|consen 470 KPLLLYGYGAYGISL-DPSFRA----SRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENG 544 (712)
T ss_pred CceEEEEecccceee-cccccc----ceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcC
Confidence 899999999887764 344433 334566799999999999999999999998888778888999999999999999
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-----chhhhhh--cCCCCCChhhhccCCcchhh
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-----TFYTEKY--MGLPSEDPVGYEYSSVMHHV 501 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-----~~~~~~~--~g~~~~~~~~~~~~s~~~~~ 501 (571)
++.++++++.|.|.||.++..++.++|++|+|+++..|+.|...+. ..+.+.+ .|.|. +-+.+...+|++..
T Consensus 545 yt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p~-~~~~~~~i~~y~pv 623 (712)
T KOG2237|consen 545 YTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNPE-DFEDLIKISPYSPV 623 (712)
T ss_pred CCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCChh-hhhhhheecccCcc
Confidence 9999999999999999999999999999999999999999865432 2233332 24444 33555666666666
Q ss_pred ccCC-----CcEEEEecCCCCCCChHHHHHHHHHHHHcC-------CCeeEEEcCCCCCCCCCCC-cHHHHHHHHHHHHH
Q 008274 502 HKMK-----GKLLLVHGMIDENVHFRHTARLINALVAAR-------KPYEILIFPDERHMPRRHR-DRIYMEERIWEFIE 568 (571)
Q Consensus 502 ~~~~-----~p~lli~G~~D~~v~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~H~~~~~~-~~~~~~~~i~~fl~ 568 (571)
++++ +-+|+..+.+|++|.+.++.++.++|+..- .++-+.+..++||+...+. .+.+-....++||.
T Consensus 624 ~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~ 703 (712)
T KOG2237|consen 624 DNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLA 703 (712)
T ss_pred CCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHHH
Confidence 6665 358999999999999999999999998642 3578889999999974332 33444555677776
Q ss_pred Hh
Q 008274 569 RT 570 (571)
Q Consensus 569 ~~ 570 (571)
+.
T Consensus 704 K~ 705 (712)
T KOG2237|consen 704 KM 705 (712)
T ss_pred HH
Confidence 64
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=196.12 Aligned_cols=213 Identities=14% Similarity=0.105 Sum_probs=154.5
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC-CCC
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-ARR 397 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~~ 397 (571)
+....+.+.+|..|.+|+..|.+. ..++.|+||++||-...+. .+..++++|+++||+|+.+|.||+ |.|
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~--~~~~~~~vIi~HGf~~~~~-------~~~~~A~~La~~G~~vLrfD~rg~~GeS 79 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKEN--SPKKNNTILIASGFARRMD-------HFAGLAEYLSSNGFHVIRYDSLHHVGLS 79 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCccc--CCCCCCEEEEeCCCCCChH-------HHHHHHHHHHHCCCEEEEecCCCCCCCC
Confidence 445667788999999999999742 2257789999999655432 256679999999999999999886 777
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchh
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 477 (571)
++++....... ...|+.++++|+.++ +.++|+|+||||||.+++.+|... .++++|+.+|+.++..+....
T Consensus 80 ~G~~~~~t~s~----g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~ 150 (307)
T PRK13604 80 SGTIDEFTMSI----GKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERA 150 (307)
T ss_pred CCccccCcccc----cHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHh
Confidence 66654322111 268999999999886 346899999999999987666643 378999999998854211100
Q ss_pred hhh---------------hcCCCCCChh---------hhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHH
Q 008274 478 TEK---------------YMGLPSEDPV---------GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA 533 (571)
Q Consensus 478 ~~~---------------~~g~~~~~~~---------~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~ 533 (571)
... +.|....... .....+|...+++++.|+|++||+.|..||++.++.+++++..
T Consensus 151 ~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s 230 (307)
T PRK13604 151 LGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRS 230 (307)
T ss_pred hhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhcc
Confidence 000 0010000000 0123455677888899999999999999999999999998643
Q ss_pred cCCCeeEEEcCCCCCCCC
Q 008274 534 ARKPYEILIFPDERHMPR 551 (571)
Q Consensus 534 ~~~~~~~~~~~~~~H~~~ 551 (571)
.+.++.++|+++|.+.
T Consensus 231 --~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 231 --EQCKLYSLIGSSHDLG 246 (307)
T ss_pred --CCcEEEEeCCCccccC
Confidence 5789999999999984
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.2e-23 Score=194.47 Aligned_cols=225 Identities=19% Similarity=0.094 Sum_probs=149.3
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh-HHHHhc--c
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF-EASIKH--N 408 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~-~~~~~~--~ 408 (571)
+..+.+.|... ..++.|+||++||.++... .+..+++.|+++||.|+++|+||+|.+.... ...... .
T Consensus 12 ~~~~~~~p~~~--~~~~~p~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~ 82 (249)
T PRK10566 12 IEVLHAFPAGQ--RDTPLPTVFFYHGFTSSKL-------VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQ 82 (249)
T ss_pred cceEEEcCCCC--CCCCCCEEEEeCCCCcccc-------hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHH
Confidence 44556677542 2246799999999876543 2445688999999999999999987531110 000000 0
Q ss_pred CCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEc-CccCCcccccchhhhhhcCCCCC
Q 008274 409 CGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSG-APVTSWDGYDTFYTEKYMGLPSE 487 (571)
Q Consensus 409 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~g~~~~ 487 (571)
......+|+.++++++.+++.+|.++|+++|||+||.+++.++.++|+...+++.. ++.... .....+.......+..
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 161 (249)
T PRK10566 83 ILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTS-LARTLFPPLIPETAAQ 161 (249)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHH-HHHHhccccccccccc
Confidence 00112567788889988887789999999999999999999999888764443332 221100 0000000000000000
Q ss_pred Ch------hhhccCCcchhhccC-CCcEEEEecCCCCCCChHHHHHHHHHHHHcCC--CeeEEEcCCCCCCCCCCCcHHH
Q 008274 488 DP------VGYEYSSVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAARK--PYEILIFPDERHMPRRHRDRIY 558 (571)
Q Consensus 488 ~~------~~~~~~s~~~~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~--~~~~~~~~~~~H~~~~~~~~~~ 558 (571)
.. ..+...++...+.++ ++|+|++||++|.++|++++.++.++++.++. ++++..+++++|.+. ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~-----~~ 236 (249)
T PRK10566 162 QAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT-----PE 236 (249)
T ss_pred HHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC-----HH
Confidence 00 112223444456666 68999999999999999999999999998876 488889999999973 35
Q ss_pred HHHHHHHHHHHhC
Q 008274 559 MEERIWEFIERTL 571 (571)
Q Consensus 559 ~~~~i~~fl~~~l 571 (571)
..+.+.+||+++|
T Consensus 237 ~~~~~~~fl~~~~ 249 (249)
T PRK10566 237 ALDAGVAFFRQHL 249 (249)
T ss_pred HHHHHHHHHHhhC
Confidence 6789999999986
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-22 Score=199.25 Aligned_cols=229 Identities=14% Similarity=0.098 Sum_probs=160.0
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+.+.++..+|..++++++.|... ++.|+||++||..+... . .+...++.|+++||+|+++|+||+|.+
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~----~~~P~Vli~gG~~~~~~--~----~~~~~~~~La~~Gy~vl~~D~pG~G~s 236 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGD----GPFPTVLVCGGLDSLQT--D----YYRLFRDYLAPRGIAMLTIDMPSVGFS 236 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCC----CCccEEEEeCCcccchh--h----hHHHHHHHHHhCCCEEEEECCCCCCCC
Confidence 5788999998888999999999742 57799887666433211 1 234457889999999999999999876
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc----
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY---- 473 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~---- 473 (571)
.... ..........++++++...+.+|.+||+++|||+||++++.++..+|++++++|+.+|+.+....
T Consensus 237 ~~~~-------~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~ 309 (414)
T PRK05077 237 SKWK-------LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKR 309 (414)
T ss_pred CCCC-------ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhh
Confidence 4310 00001122357888998888899999999999999999999999889999999998887642110
Q ss_pred ----cchhhh---hhcCCCCCChhhhc----cCCcc--hh-hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCee
Q 008274 474 ----DTFYTE---KYMGLPSEDPVGYE----YSSVM--HH-VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539 (571)
Q Consensus 474 ----~~~~~~---~~~g~~~~~~~~~~----~~s~~--~~-~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 539 (571)
...+.. ..++.+..+.+.+. ..+.. .. ..++++|+|++||++|.++|++.++.+.+.. .+.+
T Consensus 310 ~~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~----~~~~ 385 (414)
T PRK05077 310 QQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS----ADGK 385 (414)
T ss_pred hhhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC----CCCe
Confidence 000110 11233222222111 11110 11 2568899999999999999999998776543 5678
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++++|++ |.+ +....+...+.+||.++|
T Consensus 386 l~~i~~~-~~~---e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 386 LLEIPFK-PVY---RNFDKALQEISDWLEDRL 413 (414)
T ss_pred EEEccCC-Ccc---CCHHHHHHHHHHHHHHHh
Confidence 8999997 433 467889999999999875
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=194.22 Aligned_cols=240 Identities=18% Similarity=0.217 Sum_probs=163.1
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
+.+...+...||.++++..+.|... + .+.|+||++||.+... .| .+...+..|+++||.|+++|+||+|.+
T Consensus 31 ~~~~~~~~~~dg~~l~~~~~~~~~~--~-~~~~~VvllHG~~~~~----~~--~~~~~~~~L~~~Gy~V~~~D~rGhG~S 101 (330)
T PLN02298 31 KGSKSFFTSPRGLSLFTRSWLPSSS--S-PPRALIFMVHGYGNDI----SW--TFQSTAIFLAQMGFACFALDLEGHGRS 101 (330)
T ss_pred ccccceEEcCCCCEEEEEEEecCCC--C-CCceEEEEEcCCCCCc----ce--ehhHHHHHHHhCCCEEEEecCCCCCCC
Confidence 5566778888999999999988642 1 3568999999975432 12 233456778899999999999999877
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-c-c
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY-D-T 475 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~-~-~ 475 (571)
..... ....-....+|+.++++++......+..+++|+||||||.+++.++.++|++++++|+.+|....... . .
T Consensus 102 ~~~~~---~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 178 (330)
T PLN02298 102 EGLRA---YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPP 178 (330)
T ss_pred CCccc---cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCc
Confidence 53110 00000112678889999987754344568999999999999999999999999999999886542210 0 0
Q ss_pred h-------hhhhhcC----CCCC------------------ChhhhccCC--------------cchhhccCCCcEEEEe
Q 008274 476 F-------YTEKYMG----LPSE------------------DPVGYEYSS--------------VMHHVHKMKGKLLLVH 512 (571)
Q Consensus 476 ~-------~~~~~~g----~~~~------------------~~~~~~~~s--------------~~~~~~~~~~p~lli~ 512 (571)
. +..++.. .+.. ++..|.... ....+.++++|+||+|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~ 258 (330)
T PLN02298 179 WPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLH 258 (330)
T ss_pred hHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEe
Confidence 0 0011110 0000 000010000 1123567889999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCC--C-CcHHHHHHHHHHHHHHhC
Q 008274 513 GMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR--H-RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 513 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~--~-~~~~~~~~~i~~fl~~~l 571 (571)
|++|.++|++.++.+++++.. .+.+++++++++|.+.. + ...+.+.+.+.+||++++
T Consensus 259 G~~D~ivp~~~~~~l~~~i~~--~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 259 GSADVVTDPDVSRALYEEAKS--EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred cCCCCCCCHHHHHHHHHHhcc--CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999887642 35788899999999743 2 224668889999998764
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=187.47 Aligned_cols=245 Identities=14% Similarity=0.147 Sum_probs=161.4
Q ss_pred CCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC
Q 008274 317 EPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 317 ~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
...+.+.+.++ -|..+.+.+|.|+.. ..+++|+|+++||.+++.. .|... ....+.++..|++|++||..++|
T Consensus 16 ~~~~~~~~~s~~l~~~~~~~vy~P~~~--~~~~~Pvv~~lHG~~~~~~---~~~~~-~~~~~~~~~~g~~Vv~pd~~~~g 89 (283)
T PLN02442 16 GFNRRYKHFSSTLGCSMTFSVYFPPAS--DSGKVPVLYWLSGLTCTDE---NFIQK-SGAQRAAAARGIALVAPDTSPRG 89 (283)
T ss_pred CEEEEEEEeccccCCceEEEEEcCCcc--cCCCCCEEEEecCCCcChH---HHHHh-hhHHHHHhhcCeEEEecCCCCCC
Confidence 34555666653 467899999999842 3368999999999776542 33211 22346667889999999976543
Q ss_pred C--C----------hhh-hHHHHhccCCCCCchh-HHHH-HHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeE
Q 008274 396 R--R----------GLK-FEASIKHNCGRIDAED-QLTG-AEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQ 459 (571)
Q Consensus 396 ~--~----------~~~-~~~~~~~~~~~~~~~D-~~~~-~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~ 459 (571)
. . +.. +.......++.....+ +.+. ..++.+. ..+|.++++|+|+||||++++.++.++|++|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~ 169 (283)
T PLN02442 90 LNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYK 169 (283)
T ss_pred CCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEE
Confidence 1 0 100 0001111111111111 2222 2223222 23588999999999999999999999999999
Q ss_pred EEEEcCccCCcccc--cchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChH-HHHHHHHHHHHcCC
Q 008274 460 CAVSGAPVTSWDGY--DTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFR-HTARLINALVAARK 536 (571)
Q Consensus 460 ~~v~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~-~~~~~~~~l~~~~~ 536 (571)
++++.+|+.++... .......+++.+....+.+...+++..+...++|+|++||++|..++.. ++..+++++++.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~ 249 (283)
T PLN02442 170 SVSAFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGA 249 (283)
T ss_pred EEEEECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCC
Confidence 99999998775321 1112234455544333444445555556667789999999999999974 58899999999999
Q ss_pred CeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 537 PYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 537 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++++.++|+++|.+. ....+.++.++|..++
T Consensus 250 ~~~~~~~pg~~H~~~---~~~~~i~~~~~~~~~~ 280 (283)
T PLN02442 250 PVTLRLQPGYDHSYF---FIATFIDDHINHHAQA 280 (283)
T ss_pred CeEEEEeCCCCccHH---HHHHHHHHHHHHHHHH
Confidence 999999999999874 3445555556666654
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=188.58 Aligned_cols=226 Identities=17% Similarity=0.182 Sum_probs=155.8
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH
Q 008274 325 QANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 325 ~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
...||..+.+.+|.|.+ .+.|+|+++||.+.+.. .|...++.|+++||.|+++|+||+|.+.....
T Consensus 6 ~~~~g~~l~~~~~~~~~-----~~~~~v~llHG~~~~~~-------~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~-- 71 (276)
T PHA02857 6 FNLDNDYIYCKYWKPIT-----YPKALVFISHGAGEHSG-------RYEELAENISSLGILVFSHDHIGHGRSNGEKM-- 71 (276)
T ss_pred ecCCCCEEEEEeccCCC-----CCCEEEEEeCCCccccc-------hHHHHHHHHHhCCCEEEEccCCCCCCCCCccC--
Confidence 34589999999999853 35589999999765533 45667889999999999999999987753210
Q ss_pred HhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc--cc----hhh
Q 008274 405 IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY--DT----FYT 478 (571)
Q Consensus 405 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~--~~----~~~ 478 (571)
....+ ...++|+.+.++++.+.. ...+++++|||+||.+++.++.++|++++++|+.+|....... .. ...
T Consensus 72 ~~~~~-~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~ 148 (276)
T PHA02857 72 MIDDF-GVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLM 148 (276)
T ss_pred CcCCH-HHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHH
Confidence 00010 012566777777765542 3467999999999999999999999999999999987543210 00 000
Q ss_pred hhhc------------------------CCCCCC----hhhh-c-----cCCcchhhccCCCcEEEEecCCCCCCChHHH
Q 008274 479 EKYM------------------------GLPSED----PVGY-E-----YSSVMHHVHKMKGKLLLVHGMIDENVHFRHT 524 (571)
Q Consensus 479 ~~~~------------------------g~~~~~----~~~~-~-----~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~ 524 (571)
..+. ..+... ...+ . .......+.++++|+|+++|++|.++|+..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~ 228 (276)
T PHA02857 149 GIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGA 228 (276)
T ss_pred HHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHH
Confidence 0000 000000 0000 0 0001123567889999999999999999999
Q ss_pred HHHHHHHHHcCCCeeEEEcCCCCCCCCCC--CcHHHHHHHHHHHHHHh
Q 008274 525 ARLINALVAARKPYEILIFPDERHMPRRH--RDRIYMEERIWEFIERT 570 (571)
Q Consensus 525 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~fl~~~ 570 (571)
..+.+.+ ..+.++.++++++|.+... +.++++++.+.+||+++
T Consensus 229 ~~l~~~~---~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 229 YYFMQHA---NCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHHc---cCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 9988876 2367999999999988544 33788999999999874
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=181.31 Aligned_cols=242 Identities=14% Similarity=0.129 Sum_probs=162.4
Q ss_pred CCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECC--CCC
Q 008274 318 PPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDN--RGT 394 (571)
Q Consensus 318 ~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~--rG~ 394 (571)
+.+.+++.+. .+.++.+.+|.|+... .+++|+|+++||.+.+.. .|... .....++++.||.|++||. ||+
T Consensus 12 ~~~~~~~~s~~~~~~~~~~v~~P~~~~--~~~~P~vvllHG~~~~~~---~~~~~-~~~~~la~~~g~~Vv~Pd~~~~g~ 85 (275)
T TIGR02821 12 TQGFYRHKSETCGVPMTFGVFLPPQAA--AGPVPVLWYLSGLTCTHE---NFMIK-AGAQRFAAEHGLALVAPDTSPRGT 85 (275)
T ss_pred EEEEEEEeccccCCceEEEEEcCCCcc--CCCCCEEEEccCCCCCcc---HHHhh-hHHHHHHhhcCcEEEEeCCCCCcC
Confidence 4455666654 4677889999998642 256899999999876543 33111 1122444567999999997 665
Q ss_pred CCChh--hhH---------HHHhccCC-C-CCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEE
Q 008274 395 ARRGL--KFE---------ASIKHNCG-R-IDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC 460 (571)
Q Consensus 395 ~~~~~--~~~---------~~~~~~~~-~-~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~ 460 (571)
+.++. .|. ........ . .....+.+.+..+++. ..+|.++++|+|+||||++++.+++++|++|++
T Consensus 86 ~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~ 165 (275)
T TIGR02821 86 GIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKS 165 (275)
T ss_pred CCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceE
Confidence 53321 110 00000000 0 0122233444444443 447889999999999999999999999999999
Q ss_pred EEEcCccCCccccc--chhhhhhcCCCCCChhhhccCCcchhhcc--CCCcEEEEecCCCCCCCh-HHHHHHHHHHHHcC
Q 008274 461 AVSGAPVTSWDGYD--TFYTEKYMGLPSEDPVGYEYSSVMHHVHK--MKGKLLLVHGMIDENVHF-RHTARLINALVAAR 535 (571)
Q Consensus 461 ~v~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~s~~~~~~~--~~~p~lli~G~~D~~v~~-~~~~~~~~~l~~~~ 535 (571)
+++.+|+.+..... ......+++.+.. .+...++...+.+ ..+|+++.||+.|..++. .++..+.++|++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g 242 (275)
T TIGR02821 166 VSAFAPIVAPSRCPWGQKAFSAYLGADEA---AWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAG 242 (275)
T ss_pred EEEECCccCcccCcchHHHHHHHhccccc---chhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcC
Confidence 99999987654221 1122344444322 2334455554443 357999999999999998 68889999999999
Q ss_pred CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 536 KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 536 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.++++.++|+++|++. .....++..++|+.+++
T Consensus 243 ~~v~~~~~~g~~H~f~---~~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 243 QALTLRRQAGYDHSYY---FIASFIADHLRHHAERL 275 (275)
T ss_pred CCeEEEEeCCCCccch---hHHHhHHHHHHHHHhhC
Confidence 9999999999999984 35566778888888764
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.8e-21 Score=175.04 Aligned_cols=240 Identities=15% Similarity=0.151 Sum_probs=171.7
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
.......+.+.+|..+....|.|... .++..+|+++||...... ..+...+..|++.||.|+++|++|+|.
T Consensus 25 ~~~~~~~~~n~rG~~lft~~W~p~~~---~~pr~lv~~~HG~g~~~s------~~~~~~a~~l~~~g~~v~a~D~~GhG~ 95 (313)
T KOG1455|consen 25 VTYSESFFTNPRGAKLFTQSWLPLSG---TEPRGLVFLCHGYGEHSS------WRYQSTAKRLAKSGFAVYAIDYEGHGR 95 (313)
T ss_pred cceeeeeEEcCCCCEeEEEecccCCC---CCCceEEEEEcCCcccch------hhHHHHHHHHHhCCCeEEEeeccCCCc
Confidence 34555677788999999999999653 156789999999655431 245667899999999999999999998
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc---
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY--- 473 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~--- 473 (571)
+.+. .+...+ -...++|+...++.+..+..-..-..+++||||||.+++.++.++|..+.++|+.+|++-....
T Consensus 96 SdGl--~~yi~~-~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp 172 (313)
T KOG1455|consen 96 SDGL--HAYVPS-FDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKP 172 (313)
T ss_pred CCCC--cccCCc-HHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCC
Confidence 7531 111111 1223678888888877765445568999999999999999999999999999999997643210
Q ss_pred cc----------hhhhhhcCCCCC--------Chh--hhccCC----------------------cchhhccCCCcEEEE
Q 008274 474 DT----------FYTEKYMGLPSE--------DPV--GYEYSS----------------------VMHHVHKMKGKLLLV 511 (571)
Q Consensus 474 ~~----------~~~~~~~g~~~~--------~~~--~~~~~s----------------------~~~~~~~~~~p~lli 511 (571)
.. .+..++.-.|.. +++ .....+ ...++.++..|+|++
T Consensus 173 ~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflil 252 (313)
T KOG1455|consen 173 HPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLIL 252 (313)
T ss_pred CcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEE
Confidence 00 000001000100 000 011112 223466678899999
Q ss_pred ecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC---CCCcHHHHHHHHHHHHHHh
Q 008274 512 HGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR---RHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 512 ~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~---~~~~~~~~~~~i~~fl~~~ 570 (571)
||+.|.++.+..++.+++...+. +-++.+|||.-|.+. ..++.+.++..|.+||+++
T Consensus 253 HG~dD~VTDp~~Sk~Lye~A~S~--DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 253 HGTDDKVTDPKVSKELYEKASSS--DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred ecCCCcccCcHHHHHHHHhccCC--CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999999999999999976554 557779999999974 5778999999999999875
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.8e-21 Score=190.71 Aligned_cols=239 Identities=18% Similarity=0.156 Sum_probs=159.7
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
...+...+...+|..+.+..+.|.. +.|+||++||..... ..|..++..++++||.|+++|+||+|.
T Consensus 28 ~~~~~~~~~~~~g~~l~~~~~~~~~------~~~~vll~HG~~~~~-------~~y~~~~~~l~~~g~~v~~~D~~G~G~ 94 (330)
T PRK10749 28 RQREEAEFTGVDDIPIRFVRFRAPH------HDRVVVICPGRIESY-------VKYAELAYDLFHLGYDVLIIDHRGQGR 94 (330)
T ss_pred hhccceEEEcCCCCEEEEEEccCCC------CCcEEEEECCccchH-------HHHHHHHHHHHHCCCeEEEEcCCCCCC
Confidence 4556677778899999999887642 236889999965432 134556778889999999999999998
Q ss_pred ChhhhHHHHhccCC--CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-
Q 008274 397 RGLKFEASIKHNCG--RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY- 473 (571)
Q Consensus 397 ~~~~~~~~~~~~~~--~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~- 473 (571)
+............. ....+|+.++++.+... .+..++.++||||||.+++.++.++|+.++++|+.+|.......
T Consensus 95 S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~ 172 (330)
T PRK10749 95 SGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL 172 (330)
T ss_pred CCCCCCCCCcCccccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC
Confidence 76322110000000 01134555555555433 24578999999999999999999999999999999886432100
Q ss_pred cch-------hhhh--------------hcCCCC------CChh-------hhccC---------------------Ccc
Q 008274 474 DTF-------YTEK--------------YMGLPS------EDPV-------GYEYS---------------------SVM 498 (571)
Q Consensus 474 ~~~-------~~~~--------------~~g~~~------~~~~-------~~~~~---------------------s~~ 498 (571)
... +... +...+. ...+ .+... ...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (330)
T PRK10749 173 PSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVL 252 (330)
T ss_pred CcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHH
Confidence 000 0000 000000 0000 01000 011
Q ss_pred hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC---CCeeEEEcCCCCCCCCCCCc--HHHHHHHHHHHHHHh
Q 008274 499 HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR---KPYEILIFPDERHMPRRHRD--RIYMEERIWEFIERT 570 (571)
Q Consensus 499 ~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~---~~~~~~~~~~~~H~~~~~~~--~~~~~~~i~~fl~~~ 570 (571)
..+.+++.|+|++||++|.++++..+..+++.+.+++ .+.++++||+++|.+..... ++.+++.+.+||+++
T Consensus 253 ~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 253 AGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred hhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 2346678999999999999999999999999987765 35689999999999754333 788999999999875
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.6e-21 Score=190.92 Aligned_cols=237 Identities=14% Similarity=0.105 Sum_probs=157.1
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
+...+...+|.++.+..+.|.+. ++.|+||++||.+.... . .+...+..|+++||.|+++|+||+|.+..
T Consensus 62 ~~~~~~~~~g~~l~~~~~~p~~~----~~~~~iv~lHG~~~~~~---~---~~~~~~~~l~~~g~~v~~~D~~G~G~S~~ 131 (349)
T PLN02385 62 EESYEVNSRGVEIFSKSWLPENS----RPKAAVCFCHGYGDTCT---F---FFEGIARKIASSGYGVFAMDYPGFGLSEG 131 (349)
T ss_pred eeeeEEcCCCCEEEEEEEecCCC----CCCeEEEEECCCCCccc---h---HHHHHHHHHHhCCCEEEEecCCCCCCCCC
Confidence 34455567899999999998642 35689999999755421 1 23456778888999999999999987753
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc--cch-
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY--DTF- 476 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~- 476 (571)
.... . .. -...++|+.+.++.+..+...+..+++|+||||||.+++.++.++|++++++|+.+|....... ...
T Consensus 132 ~~~~-~-~~-~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~ 208 (349)
T PLN02385 132 LHGY-I-PS-FDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPL 208 (349)
T ss_pred CCCC-c-CC-HHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchH
Confidence 1100 0 00 0112566777777776543345568999999999999999999999999999999886532100 000
Q ss_pred -----------------h-----hhhhcCCCCC------Chhhhc-------------c-CCcchhhccCCCcEEEEecC
Q 008274 477 -----------------Y-----TEKYMGLPSE------DPVGYE-------------Y-SSVMHHVHKMKGKLLLVHGM 514 (571)
Q Consensus 477 -----------------~-----~~~~~g~~~~------~~~~~~-------------~-~s~~~~~~~~~~p~lli~G~ 514 (571)
+ ...+...... +...+. . ......+.++++|+|++||+
T Consensus 209 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~ 288 (349)
T PLN02385 209 VLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGE 288 (349)
T ss_pred HHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 0 0000000000 000000 0 01112356788999999999
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCC--Cc-HHHHHHHHHHHHHHhC
Q 008274 515 IDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH--RD-RIYMEERIWEFIERTL 571 (571)
Q Consensus 515 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~-~~~~~~~i~~fl~~~l 571 (571)
+|.++++..++.+++.+.. .+.+++++|+++|.+... +. ...+++.+.+||++++
T Consensus 289 ~D~vv~~~~~~~l~~~~~~--~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 289 ADKVTDPSVSKFLYEKASS--SDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred CCCccChHHHHHHHHHcCC--CCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 9999999999998887632 357888999999987422 22 4458899999999874
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.1e-20 Score=188.63 Aligned_cols=213 Identities=14% Similarity=0.112 Sum_probs=156.9
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||++|+|++...+. ..||++|+++|+.++++.
T Consensus 204 v~~p~wSpDG~~lay~s~~~g~---------------------------------~~i~~~dl~~g~~~~l~~------- 243 (435)
T PRK05137 204 VLTPRFSPNRQEITYMSYANGR---------------------------------PRVYLLDLETGQRELVGN------- 243 (435)
T ss_pred eEeeEECCCCCEEEEEEecCCC---------------------------------CEEEEEECCCCcEEEeec-------
Confidence 3468899999999998754222 268999999998877743
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWAS 182 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s 182 (571)
.......+.|||||+.+++..+++ +..+||.+|+++++.++|+..... +..+ .|++|+ ++|.+
T Consensus 244 --~~g~~~~~~~SPDG~~la~~~~~~-g~~~Iy~~d~~~~~~~~Lt~~~~~---~~~~---------~~spDG~~i~f~s 308 (435)
T PRK05137 244 --FPGMTFAPRFSPDGRKVVMSLSQG-GNTDIYTMDLRSGTTTRLTDSPAI---DTSP---------SYSPDGSQIVFES 308 (435)
T ss_pred --CCCcccCcEECCCCCEEEEEEecC-CCceEEEEECCCCceEEccCCCCc---cCce---------eEcCCCCEEEEEE
Confidence 233455789999999888877655 346899999999999888764321 1111 345554 88888
Q ss_pred ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCce
Q 008274 183 EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGK 262 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~ 262 (571)
++.|..+||++++++++.++||.+......+ .|||||+.|+|.+...+ ..+|+.+++ ++. ..+.++.....
T Consensus 309 ~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~-~~SpdG~~ia~~~~~~~--~~~i~~~d~--~~~----~~~~lt~~~~~ 379 (435)
T PRK05137 309 DRSGSPQLYVMNADGSNPRRISFGGGRYSTP-VWSPRGDLIAFTKQGGG--QFSIGVMKP--DGS----GERILTSGFLV 379 (435)
T ss_pred CCCCCCeEEEEECCCCCeEEeecCCCcccCe-EECCCCCEEEEEEcCCC--ceEEEEEEC--CCC----ceEeccCCCCC
Confidence 8888899999999999999999764444444 49999999999986554 378999998 443 45667665444
Q ss_pred EEEEECCCCCEEEEEeeCCCCC--CEEEEEEcCCCceeEecc
Q 008274 263 HVAVLDHNMRNFVDFHDSLDSP--PRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 263 ~~~~~s~~g~~~v~~~s~~~~p--~~l~~~~~~~~~~~~~l~ 302 (571)
..++|||||+.++|........ ..||++++..+ ..+.+.
T Consensus 380 ~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~-~~~~l~ 420 (435)
T PRK05137 380 EGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGR-NEREVP 420 (435)
T ss_pred CCCeECCCCCEEEEEEccCCCCCcceEEEEECCCC-ceEEcc
Confidence 5669999999999988765543 58999998444 445553
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.6e-20 Score=184.29 Aligned_cols=209 Identities=8% Similarity=0.073 Sum_probs=154.2
Q ss_pred eEEECCCCCe-EEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 27 GYWWSLDSKF-IAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 27 ~~~wSPDg~~-iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
.+.|||||++ ++|++.+... .+||++|+++|+.++++.
T Consensus 192 ~p~wSpDG~~~i~y~s~~~~~---------------------------------~~Iyv~dl~tg~~~~lt~-------- 230 (419)
T PRK04043 192 FPKWANKEQTAFYYTSYGERK---------------------------------PTLYKYNLYTGKKEKIAS-------- 230 (419)
T ss_pred eEEECCCCCcEEEEEEccCCC---------------------------------CEEEEEECCCCcEEEEec--------
Confidence 6889999997 6665543211 268999999999988853
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~ 183 (571)
..+....+.|||||+.+++...+. ...+||++|+++|+.++|+.... .+..+ .|++|+ ++|.++
T Consensus 231 -~~g~~~~~~~SPDG~~la~~~~~~-g~~~Iy~~dl~~g~~~~LT~~~~---~d~~p---------~~SPDG~~I~F~Sd 296 (419)
T PRK04043 231 -SQGMLVVSDVSKDGSKLLLTMAPK-GQPDIYLYDTNTKTLTQITNYPG---IDVNG---------NFVEDDKRIVFVSD 296 (419)
T ss_pred -CCCcEEeeEECCCCCEEEEEEccC-CCcEEEEEECCCCcEEEcccCCC---ccCcc---------EECCCCCEEEEEEC
Confidence 344555689999999888887665 45689999999999999976432 11111 344554 999999
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCC----ceeEEEEEEeCCCCCCCCCCCeEecCC
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP----LESHLYCAKLYPDWNHTLEAPVKLTNG 259 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~----~~~~l~~~~l~~~g~~~~~~~~~lt~~ 259 (571)
+.|..+||++++++++.+++|..... .. .|||||+.|+|++...+. ...+||.+++ ++. ..++||..
T Consensus 297 r~g~~~Iy~~dl~~g~~~rlt~~g~~--~~-~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~--~~g----~~~~LT~~ 367 (419)
T PRK04043 297 RLGYPNIFMKKLNSGSVEQVVFHGKN--NS-SVSTYKNYIVYSSRETNNEFGKNTFNLYLIST--NSD----YIRRLTAN 367 (419)
T ss_pred CCCCceEEEEECCCCCeEeCccCCCc--Cc-eECCCCCEEEEEEcCCCcccCCCCcEEEEEEC--CCC----CeEECCCC
Confidence 99999999999999999899864221 12 599999999999976422 2378999998 444 67889876
Q ss_pred CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 260 KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 260 ~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.....++|||||+.++|.... ..-..|+++++ +|.....|
T Consensus 368 ~~~~~p~~SPDG~~I~f~~~~-~~~~~L~~~~l-~g~~~~~l 407 (419)
T PRK04043 368 GVNQFPRFSSDGGSIMFIKYL-GNQSALGIIRL-NYNKSFLF 407 (419)
T ss_pred CCcCCeEECCCCCEEEEEEcc-CCcEEEEEEec-CCCeeEEe
Confidence 433457999999999998765 44457999998 45443444
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-21 Score=177.84 Aligned_cols=204 Identities=21% Similarity=0.205 Sum_probs=142.9
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC---Ch-hhhHHHHh-
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR---RG-LKFEASIK- 406 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~---~~-~~~~~~~~- 406 (571)
+.+++..|.+. ++.|.||++|+..+.. .....+++.|+++||.|++||+-+... .. .+-.....
T Consensus 1 ~~ay~~~P~~~----~~~~~Vvv~~d~~G~~-------~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~ 69 (218)
T PF01738_consen 1 IDAYVARPEGG----GPRPAVVVIHDIFGLN-------PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRE 69 (218)
T ss_dssp EEEEEEEETTS----SSEEEEEEE-BTTBS--------HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHH
T ss_pred CeEEEEeCCCC----CCCCEEEEEcCCCCCc-------hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHH
Confidence 46889999863 5789999999965542 234456899999999999999765433 11 11111110
Q ss_pred --ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCC
Q 008274 407 --HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGL 484 (571)
Q Consensus 407 --~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 484 (571)
.........|+.+++++|.+++.++..||+++|+|+||.+++.++.+. +.++++++..|...
T Consensus 70 ~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~--------------- 133 (218)
T PF01738_consen 70 LFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP--------------- 133 (218)
T ss_dssp CHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS---------------
T ss_pred HHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC---------------
Confidence 110112257788999999999878999999999999999999998876 67899888776100
Q ss_pred CCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCC-------CcHH
Q 008274 485 PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH-------RDRI 557 (571)
Q Consensus 485 ~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~-------~~~~ 557 (571)
...+.....++++|+|+++|++|+.++.+....+.++|++++.++++++||+++|+|... ...+
T Consensus 134 ---------~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~ 204 (218)
T PF01738_consen 134 ---------PPPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAE 204 (218)
T ss_dssp ---------GGGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHH
T ss_pred ---------CCcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHH
Confidence 011233467788999999999999999999999999999999999999999999998432 2457
Q ss_pred HHHHHHHHHHHHhC
Q 008274 558 YMEERIWEFIERTL 571 (571)
Q Consensus 558 ~~~~~i~~fl~~~l 571 (571)
+.++++++||+++|
T Consensus 205 ~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 205 DAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHhcC
Confidence 78999999999987
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.1e-20 Score=181.83 Aligned_cols=234 Identities=18% Similarity=0.179 Sum_probs=160.0
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.....+...++..+.+..|.|... .+.|+||++||.+.... .|..++..|+++||.|+++|+||+|.+.
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~~----~~~~~Vl~lHG~~~~~~-------~~~~~a~~L~~~Gy~V~~~D~rGhG~S~ 178 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAAG----EMRGILIIIHGLNEHSG-------RYLHFAKQLTSCGFGVYAMDWIGHGGSD 178 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCCC----CCceEEEEECCchHHHH-------HHHHHHHHHHHCCCEEEEeCCCCCCCCC
Confidence 456777888888999999998642 35689999999765432 3455788899999999999999998775
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC---eeEEEEEcCccCCcccccc
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD---VFQCAVSGAPVTSWDGYDT 475 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~---~~~~~v~~~~~~~~~~~~~ 475 (571)
.... +........+|+.++++++..+. +..+++|+||||||.+++.++. +|+ +++++|+.+|.........
T Consensus 179 ~~~~---~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~ 252 (395)
T PLN02652 179 GLHG---YVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP 252 (395)
T ss_pred CCCC---CCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH
Confidence 4211 00000112567888888887642 3357999999999999987765 554 7899999988754321100
Q ss_pred h-------hh---hhh--cC-----CC-CCChhhh-c-cCC----------------------cchhhccCCCcEEEEec
Q 008274 476 F-------YT---EKY--MG-----LP-SEDPVGY-E-YSS----------------------VMHHVHKMKGKLLLVHG 513 (571)
Q Consensus 476 ~-------~~---~~~--~g-----~~-~~~~~~~-~-~~s----------------------~~~~~~~~~~p~lli~G 513 (571)
. +. ..+ .+ .+ ..+++.. . ..+ ....+.++++|+|++||
T Consensus 253 ~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G 332 (395)
T PLN02652 253 IVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHG 332 (395)
T ss_pred HHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEe
Confidence 0 00 000 00 00 0000000 0 000 11234667899999999
Q ss_pred CCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 514 MIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 514 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++|.++|++.+..+++.+.. ...+++++|+++|.+......+.+++.+.+||++++
T Consensus 333 ~~D~vvp~~~a~~l~~~~~~--~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 333 TADRVTDPLASQDLYNEAAS--RHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred CCCCCCCHHHHHHHHHhcCC--CCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999887633 356788899999998666678999999999998764
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-19 Score=181.51 Aligned_cols=211 Identities=18% Similarity=0.158 Sum_probs=153.4
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|||++..... ..|+++|+++|+.+.+..
T Consensus 202 ~~p~wSPDG~~la~~s~~~g~---------------------------------~~i~i~dl~~G~~~~l~~-------- 240 (429)
T PRK03629 202 MSPAWSPDGSKLAYVTFESGR---------------------------------SALVIQTLANGAVRQVAS-------- 240 (429)
T ss_pred eeeEEcCCCCEEEEEEecCCC---------------------------------cEEEEEECCCCCeEEccC--------
Confidence 468999999999998643221 368999999998877643
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~ 183 (571)
.......+.|||||+.|++...+. ...+||++|+++|+.++|+..... ... +.|++|+ ++|.++
T Consensus 241 -~~~~~~~~~~SPDG~~La~~~~~~-g~~~I~~~d~~tg~~~~lt~~~~~---~~~---------~~wSPDG~~I~f~s~ 306 (429)
T PRK03629 241 -FPRHNGAPAFSPDGSKLAFALSKT-GSLNLYVMDLASGQIRQVTDGRSN---NTE---------PTWFPDSQNLAYTSD 306 (429)
T ss_pred -CCCCcCCeEECCCCCEEEEEEcCC-CCcEEEEEECCCCCEEEccCCCCC---cCc---------eEECCCCCEEEEEeC
Confidence 223345689999999999886654 344699999999998888754211 111 1345554 888898
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
+.|..+||.+++++++.++||........+ .|||||++|+|.+...+. .+||.+++ ++. ..++|+......
T Consensus 307 ~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~-~~SpDG~~Ia~~~~~~g~--~~I~~~dl--~~g----~~~~Lt~~~~~~ 377 (429)
T PRK03629 307 QAGRPQVYKVNINGGAPQRITWEGSQNQDA-DVSSDGKFMVMVSSNGGQ--QHIAKQDL--ATG----GVQVLTDTFLDE 377 (429)
T ss_pred CCCCceEEEEECCCCCeEEeecCCCCccCE-EECCCCCEEEEEEccCCC--ceEEEEEC--CCC----CeEEeCCCCCCC
Confidence 888899999999998888898654333333 599999999999877654 68999998 443 567788543334
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.++|||||+.++|..... ....++++++ +|+..+.|.
T Consensus 378 ~p~~SpDG~~i~~~s~~~-~~~~l~~~~~-~G~~~~~l~ 414 (429)
T PRK03629 378 TPSIAPNGTMVIYSSSQG-MGSVLNLVST-DGRFKARLP 414 (429)
T ss_pred CceECCCCCEEEEEEcCC-CceEEEEEEC-CCCCeEECc
Confidence 579999999999987643 3456888887 566555554
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-19 Score=181.53 Aligned_cols=211 Identities=14% Similarity=0.088 Sum_probs=152.7
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|+|++..++. .+||++|+++++.+.++.
T Consensus 221 ~~p~wSPDG~~La~~s~~~g~---------------------------------~~L~~~dl~tg~~~~lt~-------- 259 (448)
T PRK04792 221 MSPAWSPDGRKLAYVSFENRK---------------------------------AEIFVQDIYTQVREKVTS-------- 259 (448)
T ss_pred cCceECCCCCEEEEEEecCCC---------------------------------cEEEEEECCCCCeEEecC--------
Confidence 368999999999998754221 368999999998877743
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~ 183 (571)
.......+.|||||+.+++..+.+ ...+||++|+++|+.++|+..... +..+ .|++|+ ++|.++
T Consensus 260 -~~g~~~~~~wSPDG~~La~~~~~~-g~~~Iy~~dl~tg~~~~lt~~~~~---~~~p---------~wSpDG~~I~f~s~ 325 (448)
T PRK04792 260 -FPGINGAPRFSPDGKKLALVLSKD-GQPEIYVVDIATKALTRITRHRAI---DTEP---------SWHPDGKSLIFTSE 325 (448)
T ss_pred -CCCCcCCeeECCCCCEEEEEEeCC-CCeEEEEEECCCCCeEECccCCCC---ccce---------EECCCCCEEEEEEC
Confidence 223334689999999888876665 356899999999998888763211 1111 344554 788888
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
+.|..+||++++++++.++||........+ .|+|||++|+|++...+ ..+||.+++ ++. ..+.|+......
T Consensus 326 ~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~-~~SpDG~~l~~~~~~~g--~~~I~~~dl--~~g----~~~~lt~~~~d~ 396 (448)
T PRK04792 326 RGGKPQIYRVNLASGKVSRLTFEGEQNLGG-SITPDGRSMIMVNRTNG--KFNIARQDL--ETG----AMQVLTSTRLDE 396 (448)
T ss_pred CCCCceEEEEECCCCCEEEEecCCCCCcCe-eECCCCCEEEEEEecCC--ceEEEEEEC--CCC----CeEEccCCCCCC
Confidence 888899999999998888898533222233 59999999999887654 378999998 443 566777653333
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.++++|||+.++|..... ....+++++. +|+..+.+.
T Consensus 397 ~ps~spdG~~I~~~~~~~-g~~~l~~~~~-~G~~~~~l~ 433 (448)
T PRK04792 397 SPSVAPNGTMVIYSTTYQ-GKQVLAAVSI-DGRFKARLP 433 (448)
T ss_pred CceECCCCCEEEEEEecC-CceEEEEEEC-CCCceEECc
Confidence 568999999999987654 3457888887 566555553
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=8e-20 Score=157.17 Aligned_cols=202 Identities=19% Similarity=0.235 Sum_probs=153.8
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
-.|+++||..++.. ..+.++++|.++||.|.+|.|||+|.....+......+| .+|+.++.++|.++++
T Consensus 16 ~AVLllHGFTGt~~-------Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~~gy 84 (243)
T COG1647 16 RAVLLLHGFTGTPR-------DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKEAGY 84 (243)
T ss_pred EEEEEEeccCCCcH-------HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHHcCC
Confidence 67888999777643 356689999999999999999999999989988888888 8999999999998764
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC---cccc-cc--hhhhhhcCCCCCCh----hhhccCC---
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS---WDGY-DT--FYTEKYMGLPSEDP----VGYEYSS--- 496 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~---~~~~-~~--~~~~~~~g~~~~~~----~~~~~~s--- 496 (571)
+.|.++|.||||.+++.++.++| .+++|..++... |... .. .|.+++......+. +.++...
T Consensus 85 ---~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~ 159 (243)
T COG1647 85 ---DEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTP 159 (243)
T ss_pred ---CeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcch
Confidence 57999999999999999999988 466666554443 2110 00 01111111111111 1122221
Q ss_pred -------------cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHH
Q 008274 497 -------------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 563 (571)
Q Consensus 497 -------------~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i 563 (571)
....++.|..|++++.|.+|+.||.+.+..+++.+.. .+.++..|+++||-+.....++.+.+.+
T Consensus 160 ~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s--~~KeL~~~e~SgHVIt~D~Erd~v~e~V 237 (243)
T COG1647 160 MTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVES--DDKELKWLEGSGHVITLDKERDQVEEDV 237 (243)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccC--CcceeEEEccCCceeecchhHHHHHHHH
Confidence 2234667888999999999999999999999998754 4678889999999998889999999999
Q ss_pred HHHHHH
Q 008274 564 WEFIER 569 (571)
Q Consensus 564 ~~fl~~ 569 (571)
..||+.
T Consensus 238 ~~FL~~ 243 (243)
T COG1647 238 ITFLEK 243 (243)
T ss_pred HHHhhC
Confidence 999973
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.6e-19 Score=171.98 Aligned_cols=228 Identities=16% Similarity=0.146 Sum_probs=158.2
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCC
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARR 397 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~ 397 (571)
.+.+.++..+| .+.+.+|.|.. ...|+||++|||+........ +...+..|+. .|+.|+++|||.....
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~-----~~~p~vv~~HGGg~~~g~~~~----~~~~~~~la~~~g~~Vv~vdYrlape~ 126 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQP-----DSQATLFYLHGGGFILGNLDT----HDRIMRLLASYSGCTVIGIDYTLSPEA 126 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCC-----CCCCEEEEEeCCcccCCCchh----hhHHHHHHHHHcCCEEEEecCCCCCCC
Confidence 56778887777 59999999964 245999999999865432222 2335667775 6999999999976532
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC------CCeeEEEEEcCccC
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF------PDVFQCAVSGAPVT 468 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~------~~~~~~~v~~~~~~ 468 (571)
. ....++|+.++++|+.++ ..+|.+||+|+|+|+||.+++.++.+. +..++++++.+|+.
T Consensus 127 ~-----------~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 127 R-----------FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred C-----------CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 1 112378999999998764 347889999999999999999888642 35688899998887
Q ss_pred Ccccccc-----------------hhhhhhcCCCCCChhhhccCCcch-hhccCCCcEEEEecCCCCCCChHHHHHHHHH
Q 008274 469 SWDGYDT-----------------FYTEKYMGLPSEDPVGYEYSSVMH-HVHKMKGKLLLVHGMIDENVHFRHTARLINA 530 (571)
Q Consensus 469 ~~~~~~~-----------------~~~~~~~g~~~~~~~~~~~~s~~~-~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~ 530 (571)
+...... ++...|++.+.+ ... ...+|.. .+..--.|++|++|+.|..++ ++..+.++
T Consensus 196 ~~~~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~-~~~-p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~ 271 (318)
T PRK10162 196 GLRDSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDAD-RES-PYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQT 271 (318)
T ss_pred CCCCChhHHHhCCCccccCHHHHHHHHHHhCCCccc-cCC-cccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHH
Confidence 6532110 011112221111 000 0112221 111223699999999999864 89999999
Q ss_pred HHHcCCCeeEEEcCCCCCCCCCC----CcHHHHHHHHHHHHHHhC
Q 008274 531 LVAARKPYEILIFPDERHMPRRH----RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 531 l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~i~~fl~~~l 571 (571)
|+++|++++++++++..|+|... +......+.+.+||.++|
T Consensus 272 L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 272 LAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred HHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998422 345677888999998764
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.1e-19 Score=178.87 Aligned_cols=210 Identities=14% Similarity=0.126 Sum_probs=152.6
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|+|++..... .+||++|+++|+.++++.
T Consensus 199 ~~p~wSPDG~~la~~s~~~~~---------------------------------~~I~~~dl~~g~~~~l~~-------- 237 (427)
T PRK02889 199 ISPAWSPDGTKLAYVSFESKK---------------------------------PVVYVHDLATGRRRVVAN-------- 237 (427)
T ss_pred ccceEcCCCCEEEEEEccCCC---------------------------------cEEEEEECCCCCEEEeec--------
Confidence 468899999999997653221 268999999998877742
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~ 183 (571)
.......+.|||||+.+++..++++ ..+||.+|+++++.++|+..... +..+ .|++|+ ++|.++
T Consensus 238 -~~g~~~~~~~SPDG~~la~~~~~~g-~~~Iy~~d~~~~~~~~lt~~~~~---~~~~---------~wSpDG~~l~f~s~ 303 (427)
T PRK02889 238 -FKGSNSAPAWSPDGRTLAVALSRDG-NSQIYTVNADGSGLRRLTQSSGI---DTEP---------FFSPDGRSIYFTSD 303 (427)
T ss_pred -CCCCccceEECCCCCEEEEEEccCC-CceEEEEECCCCCcEECCCCCCC---CcCe---------EEcCCCCEEEEEec
Confidence 2334457899999999888766653 46899999999988877653211 1111 345554 888888
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
+.|..+||.+++++++.+++|...-....+ .|||||++|+|.+...+. .+|+.+++ .+. ..++++......
T Consensus 304 ~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~-~~SpDG~~Ia~~s~~~g~--~~I~v~d~--~~g----~~~~lt~~~~~~ 374 (427)
T PRK02889 304 RGGAPQIYRMPASGGAAQRVTFTGSYNTSP-RISPDGKLLAYISRVGGA--FKLYVQDL--ATG----QVTALTDTTRDE 374 (427)
T ss_pred CCCCcEEEEEECCCCceEEEecCCCCcCce-EECCCCCEEEEEEccCCc--EEEEEEEC--CCC----CeEEccCCCCcc
Confidence 888899999999888888887542112233 599999999999876653 68999998 433 566777654445
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.++|+|||+.++|....... ..++++++ +++..+.+
T Consensus 375 ~p~~spdg~~l~~~~~~~g~-~~l~~~~~-~g~~~~~l 410 (427)
T PRK02889 375 SPSFAPNGRYILYATQQGGR-SVLAAVSS-DGRIKQRL 410 (427)
T ss_pred CceECCCCCEEEEEEecCCC-EEEEEEEC-CCCceEEe
Confidence 67999999999998876543 57888887 56554444
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.4e-19 Score=163.20 Aligned_cols=214 Identities=21% Similarity=0.153 Sum_probs=163.6
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
+.+.++.++ .++.+++..|... .+.|+||++|+-.+... .....++.|++.||.|++||+-+..+...
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~----~~~P~VIv~hei~Gl~~-------~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~ 70 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGA----GGFPGVIVLHEIFGLNP-------HIRDVARRLAKAGYVVLAPDLYGRQGDPT 70 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcC----CCCCEEEEEecccCCch-------HHHHHHHHHHhCCcEEEechhhccCCCCC
Confidence 457778766 7899999999874 34499999999555422 34557899999999999999765322111
Q ss_pred hh------HHHH--hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc
Q 008274 400 KF------EASI--KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 471 (571)
Q Consensus 400 ~~------~~~~--~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~ 471 (571)
.. .... ..........|+.+++++|..++.++..+|+++|+|+||.+++.++.+.| .++++++..|...-
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~- 148 (236)
T COG0412 71 DIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA- 148 (236)
T ss_pred cccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC-
Confidence 11 1110 00111234689999999999998889999999999999999999999766 77998887654210
Q ss_pred cccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC
Q 008274 472 GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR 551 (571)
Q Consensus 472 ~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 551 (571)
. ......++++|+|+.+|+.|..+|......+.+++...++.+++.+|+++.|+|.
T Consensus 149 ---------------~---------~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~ 204 (236)
T COG0412 149 ---------------D---------DTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFA 204 (236)
T ss_pred ---------------C---------cccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccc
Confidence 0 0112568899999999999999999999999999999988999999999999996
Q ss_pred CCC----------cHHHHHHHHHHHHHHhC
Q 008274 552 RHR----------DRIYMEERIWEFIERTL 571 (571)
Q Consensus 552 ~~~----------~~~~~~~~i~~fl~~~l 571 (571)
... ...+.++++++||+++|
T Consensus 205 ~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 205 NDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred cCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 431 25678899999999875
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-18 Score=179.12 Aligned_cols=210 Identities=17% Similarity=0.164 Sum_probs=152.0
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|+|++.+... .+||++|+++|+.+++..
T Consensus 202 ~~p~wSpDG~~la~~s~~~~~---------------------------------~~l~~~~l~~g~~~~l~~-------- 240 (430)
T PRK00178 202 LSPRWSPDGKRIAYVSFEQKR---------------------------------PRIFVQNLDTGRREQITN-------- 240 (430)
T ss_pred eeeeECCCCCEEEEEEcCCCC---------------------------------CEEEEEECCCCCEEEccC--------
Confidence 467899999999998754221 268999999998887743
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC--eEEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG--GFIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d--~~~~~s~ 183 (571)
.......+.|||||+.+++..++.+ ..+||++|+++++.++|+..... ...+ .|++| .++|.++
T Consensus 241 -~~g~~~~~~~SpDG~~la~~~~~~g-~~~Iy~~d~~~~~~~~lt~~~~~---~~~~---------~~spDg~~i~f~s~ 306 (430)
T PRK00178 241 -FEGLNGAPAWSPDGSKLAFVLSKDG-NPEIYVMDLASRQLSRVTNHPAI---DTEP---------FWGKDGRTLYFTSD 306 (430)
T ss_pred -CCCCcCCeEECCCCCEEEEEEccCC-CceEEEEECCCCCeEEcccCCCC---cCCe---------EECCCCCEEEEEEC
Confidence 2334456899999999988776653 46899999999998888653211 1111 34444 4888898
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
+.|..+||++++.+++.++||....... .+.|||||+.|+|.+...+ ..+|+.+++ .+. ..++|+......
T Consensus 307 ~~g~~~iy~~d~~~g~~~~lt~~~~~~~-~~~~Spdg~~i~~~~~~~~--~~~l~~~dl--~tg----~~~~lt~~~~~~ 377 (430)
T PRK00178 307 RGGKPQIYKVNVNGGRAERVTFVGNYNA-RPRLSADGKTLVMVHRQDG--NFHVAAQDL--QRG----SVRILTDTSLDE 377 (430)
T ss_pred CCCCceEEEEECCCCCEEEeecCCCCcc-ceEECCCCCEEEEEEccCC--ceEEEEEEC--CCC----CEEEccCCCCCC
Confidence 8899999999999988888885432222 2359999999999987665 367999998 443 567788654334
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.+++||||+.++|....... ..|+++++ ++...+.+
T Consensus 378 ~p~~spdg~~i~~~~~~~g~-~~l~~~~~-~g~~~~~l 413 (430)
T PRK00178 378 SPSVAPNGTMLIYATRQQGR-GVLMLVSI-NGRVRLPL 413 (430)
T ss_pred CceECCCCCEEEEEEecCCc-eEEEEEEC-CCCceEEC
Confidence 56899999999998765433 47888887 44443344
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-18 Score=175.53 Aligned_cols=213 Identities=13% Similarity=0.085 Sum_probs=149.1
Q ss_pred ceEEECCCCCe--EEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 26 TGYWWSLDSKF--IAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 26 ~~~~wSPDg~~--iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
..+.|||||++ ++|++...+. .+||+.++++|+.++++.
T Consensus 188 ~sP~wSPDG~~~~~~y~S~~~g~---------------------------------~~I~~~~l~~g~~~~lt~------ 228 (428)
T PRK01029 188 ITPTWMHIGSGFPYLYVSYKLGV---------------------------------PKIFLGSLENPAGKKILA------ 228 (428)
T ss_pred ccceEccCCCceEEEEEEccCCC---------------------------------ceEEEEECCCCCceEeec------
Confidence 46899999998 5556654322 368999999999888854
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEE--ECCC---CceEEEEEeecCCeeeccCCcccCCCCCccCCCe-
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKF--DIKT---GQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG- 177 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~--d~~~---g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~- 177 (571)
.......+.|||||+.|++++++.. ..+||.. |+++ |+.++|+..... . .. .+.|++|+
T Consensus 229 ---~~g~~~~p~wSPDG~~Laf~s~~~g-~~di~~~~~~~~~g~~g~~~~lt~~~~~-~-~~---------~p~wSPDG~ 293 (428)
T PRK01029 229 ---LQGNQLMPTFSPRKKLLAFISDRYG-NPDLFIQSFSLETGAIGKPRRLLNEAFG-T-QG---------NPSFSPDGT 293 (428)
T ss_pred ---CCCCccceEECCCCCEEEEEECCCC-CcceeEEEeecccCCCCcceEeecCCCC-C-cC---------CeEECCCCC
Confidence 2334456899999999999887653 2356664 5554 466677653211 0 00 11455664
Q ss_pred -EEEEEecCCccEEEEEeCC--CceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCe
Q 008274 178 -FIWASEKTGFRHLYLHDIN--GTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPV 254 (571)
Q Consensus 178 -~~~~s~~~g~~~l~~~~~~--~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~ 254 (571)
++|.++++|..+||+++++ ++..++||........+ .|||||+.|+|.+...+. .+|+.+++ .+. +.+
T Consensus 294 ~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p-~wSPDG~~Laf~~~~~g~--~~I~v~dl--~~g----~~~ 364 (428)
T PRK01029 294 RLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCP-AWSPDGKKIAFCSVIKGV--RQICVYDL--ATG----RDY 364 (428)
T ss_pred EEEEEECCCCCceEEEEECcccccceEEeccCCCCccce-eECCCCCEEEEEEcCCCC--cEEEEEEC--CCC----CeE
Confidence 8888888898999999875 35578888764334444 499999999999887653 78999998 444 667
Q ss_pred EecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 255 KLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 255 ~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
+|+... ....++|||||+.++|..... ....||++++.+++ .+.|+.
T Consensus 365 ~Lt~~~~~~~~p~wSpDG~~L~f~~~~~-g~~~L~~vdl~~g~-~~~Lt~ 412 (428)
T PRK01029 365 QLTTSPENKESPSWAIDSLHLVYSAGNS-NESELYLISLITKK-TRKIVI 412 (428)
T ss_pred EccCCCCCccceEECCCCCEEEEEECCC-CCceEEEEECCCCC-EEEeec
Confidence 888654 234569999999999987653 44689999986555 455543
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.7e-19 Score=169.35 Aligned_cols=232 Identities=22% Similarity=0.228 Sum_probs=159.0
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
...+-.+...||..+....+.+... +..+||++||..... ..|..++..|..+||.|+++|.||+|.+
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~-----~~g~Vvl~HG~~Eh~-------~ry~~la~~l~~~G~~V~~~D~RGhG~S 75 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEP-----PKGVVVLVHGLGEHS-------GRYEELADDLAARGFDVYALDLRGHGRS 75 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCC-----CCcEEEEecCchHHH-------HHHHHHHHHHHhCCCEEEEecCCCCCCC
Confidence 3455677778999999999988752 338999999975553 3566789999999999999999999988
Q ss_pred hh--hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc---
Q 008274 398 GL--KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG--- 472 (571)
Q Consensus 398 ~~--~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~--- 472 (571)
.. ......... -..|+.+.++.+... ....+++|+||||||.+++.++.+++..++++|+.+|+.....
T Consensus 76 ~r~~rg~~~~f~~----~~~dl~~~~~~~~~~--~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~ 149 (298)
T COG2267 76 PRGQRGHVDSFAD----YVDDLDAFVETIAEP--DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAIL 149 (298)
T ss_pred CCCCcCCchhHHH----HHHHHHHHHHHHhcc--CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHH
Confidence 53 111111111 134444444444432 1346899999999999999999999999999999999876542
Q ss_pred ccc-----------hhhhhhcCC----------CCCCh---hhhccCCc-----------------------chhhccCC
Q 008274 473 YDT-----------FYTEKYMGL----------PSEDP---VGYEYSSV-----------------------MHHVHKMK 505 (571)
Q Consensus 473 ~~~-----------~~~~~~~g~----------~~~~~---~~~~~~s~-----------------------~~~~~~~~ 505 (571)
... ......... ...++ +.|. .+| .....+++
T Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~-~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~ 228 (298)
T COG2267 150 RLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYE-ADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIA 228 (298)
T ss_pred HHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHh-cCCccccCCccHHHHHHHHHhhcccchhcccccc
Confidence 000 000000000 00000 0111 111 11244567
Q ss_pred CcEEEEecCCCCCCC-hHHHHHHHHHHHHcCC-CeeEEEcCCCCCCCCCCCcH--HHHHHHHHHHHHHhC
Q 008274 506 GKLLLVHGMIDENVH-FRHTARLINALVAARK-PYEILIFPDERHMPRRHRDR--IYMEERIWEFIERTL 571 (571)
Q Consensus 506 ~p~lli~G~~D~~v~-~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~--~~~~~~i~~fl~~~l 571 (571)
.|+||++|++|.+++ .+...++++++ +. +.++++++++.|.+....+. +.+++.+.+||.+++
T Consensus 229 ~PvLll~g~~D~vv~~~~~~~~~~~~~---~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 229 LPVLLLQGGDDRVVDNVEGLARFFERA---GSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred CCEEEEecCCCccccCcHHHHHHHHhc---CCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 899999999999999 67777766655 43 47999999999998766666 899999999998763
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.5e-18 Score=174.88 Aligned_cols=211 Identities=15% Similarity=0.094 Sum_probs=152.9
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|+|++..... .+|+++|+++++.++++.
T Consensus 207 ~~p~wSpDg~~la~~s~~~~~---------------------------------~~l~~~dl~~g~~~~l~~-------- 245 (433)
T PRK04922 207 LSPAWSPDGKKLAYVSFERGR---------------------------------SAIYVQDLATGQRELVAS-------- 245 (433)
T ss_pred ccccCCCCCCEEEEEecCCCC---------------------------------cEEEEEECCCCCEEEecc--------
Confidence 467899999999998643221 268999999998877743
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~ 183 (571)
.......+.|||||+.+++...+.+ ..+||++|+++|+.++|+..... +..+ .|++|+ ++|.++
T Consensus 246 -~~g~~~~~~~SpDG~~l~~~~s~~g-~~~Iy~~d~~~g~~~~lt~~~~~---~~~~---------~~spDG~~l~f~sd 311 (433)
T PRK04922 246 -FRGINGAPSFSPDGRRLALTLSRDG-NPEIYVMDLGSRQLTRLTNHFGI---DTEP---------TWAPDGKSIYFTSD 311 (433)
T ss_pred -CCCCccCceECCCCCEEEEEEeCCC-CceEEEEECCCCCeEECccCCCC---ccce---------EECCCCCEEEEEEC
Confidence 2334456899999998888766653 45899999999998888653211 1111 344544 888888
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
+.|..+||.+++++++.++||........+ .|||||++|+|.+...+ ..+|+.+++ .+. ..++|+......
T Consensus 312 ~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~-~~SpDG~~Ia~~~~~~~--~~~I~v~d~--~~g----~~~~Lt~~~~~~ 382 (433)
T PRK04922 312 RGGRPQIYRVAASGGSAERLTFQGNYNARA-SVSPDGKKIAMVHGSGG--QYRIAVMDL--STG----SVRTLTPGSLDE 382 (433)
T ss_pred CCCCceEEEEECCCCCeEEeecCCCCccCE-EECCCCCEEEEEECCCC--ceeEEEEEC--CCC----CeEECCCCCCCC
Confidence 888899999999888888888643222233 59999999999987544 368999998 443 566888654444
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.+.+||||++++|..... .-..||++++ ++...+.+.
T Consensus 383 ~p~~spdG~~i~~~s~~~-g~~~L~~~~~-~g~~~~~l~ 419 (433)
T PRK04922 383 SPSFAPNGSMVLYATREG-GRGVLAAVST-DGRVRQRLV 419 (433)
T ss_pred CceECCCCCEEEEEEecC-CceEEEEEEC-CCCceEEcc
Confidence 569999999999987653 3458999988 455455554
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.8e-19 Score=171.26 Aligned_cols=234 Identities=20% Similarity=0.263 Sum_probs=150.8
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
....++|.+.+|..|+++++.|... .++.|+||.+||.++... . +. ....++.+||+|+.+|.||.++.
T Consensus 55 ~vy~v~f~s~~g~~V~g~l~~P~~~---~~~~Pavv~~hGyg~~~~---~----~~-~~~~~a~~G~~vl~~d~rGqg~~ 123 (320)
T PF05448_consen 55 EVYDVSFESFDGSRVYGWLYRPKNA---KGKLPAVVQFHGYGGRSG---D----PF-DLLPWAAAGYAVLAMDVRGQGGR 123 (320)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEES-S---SSSEEEEEEE--TT--GG---G----HH-HHHHHHHTT-EEEEE--TTTSSS
T ss_pred EEEEEEEEccCCCEEEEEEEecCCC---CCCcCEEEEecCCCCCCC---C----cc-cccccccCCeEEEEecCCCCCCC
Confidence 4567899999999999999999843 278999999999765422 1 11 12357899999999999998854
Q ss_pred hhhhHHH------HhccCCCC----------CchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEE
Q 008274 398 GLKFEAS------IKHNCGRI----------DAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 461 (571)
Q Consensus 398 ~~~~~~~------~~~~~~~~----------~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~ 461 (571)
..+.... .+...|.. .+.|+..+++++.+++.+|.+||++.|.|+||.+++.+++..+ +++++
T Consensus 124 ~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~ 202 (320)
T PF05448_consen 124 SPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAA 202 (320)
T ss_dssp S-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEE
T ss_pred CCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEE
Confidence 3221110 00001111 2578999999999999999999999999999999999999765 57888
Q ss_pred EEcCccC-Ccccc----c--chhhh--hhcC----CCCCChh---hhccCCcchhhccCCCcEEEEecCCCCCCChHHHH
Q 008274 462 VSGAPVT-SWDGY----D--TFYTE--KYMG----LPSEDPV---GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTA 525 (571)
Q Consensus 462 v~~~~~~-~~~~~----~--~~~~~--~~~g----~~~~~~~---~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~ 525 (571)
++..|.. |+... . ..|.+ +|+. .+....+ ...-.+..+.+.+|++|+++..|-.|.+||+....
T Consensus 203 ~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~f 282 (320)
T PF05448_consen 203 AADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQF 282 (320)
T ss_dssp EEESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHH
T ss_pred EecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHH
Confidence 8877754 43211 0 11111 1211 1111111 22335677789999999999999999999999999
Q ss_pred HHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 526 RLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 526 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
..++++ ..+.++.+||..+|... .....++.++||.+|
T Consensus 283 A~yN~i---~~~K~l~vyp~~~He~~----~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 283 AAYNAI---PGPKELVVYPEYGHEYG----PEFQEDKQLNFLKEH 320 (320)
T ss_dssp HHHCC-----SSEEEEEETT--SSTT----HHHHHHHHHHHHHH-
T ss_pred HHHhcc---CCCeeEEeccCcCCCch----hhHHHHHHHHHHhcC
Confidence 999888 45689999999999752 222367789999875
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.8e-19 Score=161.66 Aligned_cols=193 Identities=13% Similarity=0.085 Sum_probs=124.8
Q ss_pred EEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh--HHHHhccCCC
Q 008274 334 GALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF--EASIKHNCGR 411 (571)
Q Consensus 334 ~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~--~~~~~~~~~~ 411 (571)
+++|.|++. .+++|+||++||+++... .+...+ .+...+.+.||+|++||+||++..+..+ ........+.
T Consensus 1 ~~ly~P~~~---~~~~P~vv~lHG~~~~~~---~~~~~~-~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~ 73 (212)
T TIGR01840 1 MYVYVPAGL---TGPRALVLALHGCGQTAS---AYVIDW-GWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGT 73 (212)
T ss_pred CEEEcCCCC---CCCCCEEEEeCCCCCCHH---HHhhhc-ChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCC
Confidence 368889774 257899999999876533 111111 1345566789999999999986543322 1111112233
Q ss_pred CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhh
Q 008274 412 IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVG 491 (571)
Q Consensus 412 ~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 491 (571)
.+..|+..+++++.++..+|.+||+|+|+|+||++++.+++++|++|++++..++..........-....+ .+......
T Consensus 74 ~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 152 (212)
T TIGR01840 74 GEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQM-CTAATAAS 152 (212)
T ss_pred ccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhc-CCCCCHHH
Confidence 45778889999999887789999999999999999999999999999999888775421100000000000 00011111
Q ss_pred hccC-Cc-chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHc
Q 008274 492 YEYS-SV-MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAA 534 (571)
Q Consensus 492 ~~~~-s~-~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~ 534 (571)
+.+. .. .........|++|+||++|.+||++.++.++++|++.
T Consensus 153 ~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 153 VCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 1000 00 0111222346789999999999999999999999876
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.3e-18 Score=153.31 Aligned_cols=217 Identities=20% Similarity=0.156 Sum_probs=157.7
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTAR 396 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~ 396 (571)
..+.+..++..|..+.+..+.|+. ...++|++.||...+.. ++..+...|. ..++.|+.+||+|.|.
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~-----~~~~~lly~hGNa~Dlg-------q~~~~~~~l~~~ln~nv~~~DYSGyG~ 101 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE-----AAHPTLLYSHGNAADLG-------QMVELFKELSIFLNCNVVSYDYSGYGR 101 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc-----ccceEEEEcCCcccchH-------HHHHHHHHHhhcccceEEEEecccccc
Confidence 567778888888888888888875 24589999999744322 1211222332 3699999999999988
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 476 (571)
+++..... ...+|+.++.++|.+... ..++|+|+|+|+|...++.+|++.| .+++|+.+|+.+.......
T Consensus 102 S~G~psE~-------n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~ 171 (258)
T KOG1552|consen 102 SSGKPSER-------NLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFP 171 (258)
T ss_pred cCCCcccc-------cchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhcc
Confidence 76543221 348999999999999865 7789999999999999999999988 7999999999874321100
Q ss_pred hhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcH
Q 008274 477 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR 556 (571)
Q Consensus 477 ~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 556 (571)
... ....+..+..+..+..+++|+|++||+.|+++++.++.+++++.+. +++.....++||.- .+..
T Consensus 172 -------~~~-~~~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~---~~epl~v~g~gH~~--~~~~ 238 (258)
T KOG1552|consen 172 -------DTK-TTYCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKE---KVEPLWVKGAGHND--IELY 238 (258)
T ss_pred -------Ccc-eEEeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccc---cCCCcEEecCCCcc--cccC
Confidence 000 0011222333567788889999999999999999999999998744 46777888999974 2233
Q ss_pred HHHHHHHHHHHHH
Q 008274 557 IYMEERIWEFIER 569 (571)
Q Consensus 557 ~~~~~~i~~fl~~ 569 (571)
..+.+.+.+|+..
T Consensus 239 ~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 239 PEYIEHLRRFISS 251 (258)
T ss_pred HHHHHHHHHHHHH
Confidence 4556666666654
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.4e-18 Score=156.00 Aligned_cols=185 Identities=13% Similarity=0.100 Sum_probs=127.2
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC----ChhhhHHHHhccCCCCC-------ch
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR----RGLKFEASIKHNCGRID-------AE 415 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~----~~~~~~~~~~~~~~~~~-------~~ 415 (571)
++.|+||++||.+++.. .+...+..|...++.+..+.++|... .+..|.... ....... ..
T Consensus 14 ~~~~~vIlLHG~G~~~~-------~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~-~~~~~~~~~~~~~~~~ 85 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-------AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQ-GITEDNRQARVAAIMP 85 (232)
T ss_pred CCCcEEEEEeCCCCChH-------HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCC-CCCccchHHHHHHHHH
Confidence 45689999999777643 23456778887775555555555321 122222110 0000011 22
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccC
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYS 495 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 495 (571)
.+.+.++++.++..++.++|+++|+|+||.+++.++.++|+.++++++.++... ..+.
T Consensus 86 ~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~-------------~~~~--------- 143 (232)
T PRK11460 86 TFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA-------------SLPE--------- 143 (232)
T ss_pred HHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc-------------cccc---------
Confidence 344556666666667889999999999999999999889998888877665321 0000
Q ss_pred CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 496 SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 496 s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
....++|+|++||++|.+||++.+.++.++|++.+.++++++||+++|.+. .+..+.+.+||.+.|
T Consensus 144 -----~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~-----~~~~~~~~~~l~~~l 209 (232)
T PRK11460 144 -----TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID-----PRLMQFALDRLRYTV 209 (232)
T ss_pred -----cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC-----HHHHHHHHHHHHHHc
Confidence 112368999999999999999999999999999999999999999999983 244556667776543
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=162.63 Aligned_cols=235 Identities=16% Similarity=0.143 Sum_probs=149.2
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+...++.+||..+...+...+. .+.+.|+||++||.+++.. ......++..|+++||.|+++|+||+|++
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~---~~~~~p~vll~HG~~g~~~-----~~~~~~~~~~l~~~G~~v~~~d~rG~g~~ 101 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPA---QARHKPRLVLFHGLEGSFN-----SPYAHGLLEAAQKRGWLGVVMHFRGCSGE 101 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCc---cCCCCCEEEEeCCCCCCCc-----CHHHHHHHHHHHHCCCEEEEEeCCCCCCC
Confidence 344555778888776554322111 1235689999999766532 11223457888999999999999999865
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCe--eEEEEEcCccCCccc---
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDV--FQCAVSGAPVTSWDG--- 472 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~--~~~~v~~~~~~~~~~--- 472 (571)
...... .......+|+.++++++.++. ...+++++||||||.+++.+++++++. +.++++.++..++..
T Consensus 102 ~~~~~~----~~~~~~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~ 175 (324)
T PRK10985 102 PNRLHR----IYHSGETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSY 175 (324)
T ss_pred ccCCcc----eECCCchHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHH
Confidence 422111 111224689999999998763 346799999999999988888776543 777777777654310
Q ss_pred ---------ccchhh-----------hhhcCCCC---------------------------CChhhhccCCcchhhccCC
Q 008274 473 ---------YDTFYT-----------EKYMGLPS---------------------------EDPVGYEYSSVMHHVHKMK 505 (571)
Q Consensus 473 ---------~~~~~~-----------~~~~g~~~---------------------------~~~~~~~~~s~~~~~~~~~ 505 (571)
+...+. ..+.+... ...+.|...++...+.+++
T Consensus 176 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~ 255 (324)
T PRK10985 176 RMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIR 255 (324)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCC
Confidence 000000 00001000 0012233445556678889
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCC----CCcHHHHHHHHHHHHHHh
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIERT 570 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~ 570 (571)
+|+|+++|++|..++++....+.+ ...++++.+++++||.... ........+.+.+||+..
T Consensus 256 ~P~lii~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 256 KPTLIIHAKDDPFMTHEVIPKPES----LPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCEEEEecCCCCCCChhhChHHHH----hCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 999999999999998776655432 2457888999999996421 123346667788888764
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.3e-18 Score=144.56 Aligned_cols=224 Identities=16% Similarity=0.137 Sum_probs=160.5
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+.+++.+.|..++++++..-+ ...|+++++|+..+... .+.....-++.+.+..|+.++|||.|.+
T Consensus 53 pye~i~l~T~D~vtL~a~~~~~E------~S~pTlLyfh~NAGNmG------hr~~i~~~fy~~l~mnv~ivsYRGYG~S 120 (300)
T KOG4391|consen 53 PYERIELRTRDKVTLDAYLMLSE------SSRPTLLYFHANAGNMG------HRLPIARVFYVNLKMNVLIVSYRGYGKS 120 (300)
T ss_pred CceEEEEEcCcceeEeeeeeccc------CCCceEEEEccCCCccc------chhhHHHHHHHHcCceEEEEEeeccccC
Confidence 56889999999999999988833 35699999999877654 1222223456789999999999999877
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc----
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY---- 473 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~---- 473 (571)
.+.....+ -.-|..++++|+..++..|..+++++|.|.||.+|..+++++.+++.|++.-.-+......
T Consensus 121 ~GspsE~G-------L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~ 193 (300)
T KOG4391|consen 121 EGSPSEEG-------LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPL 193 (300)
T ss_pred CCCccccc-------eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhe
Confidence 65433222 1568999999999999999999999999999999999999999999999987655543111
Q ss_pred cchhhhhhcCCCCCChhhhc-cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCC
Q 008274 474 DTFYTEKYMGLPSEDPVGYE-YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR 552 (571)
Q Consensus 474 ~~~~~~~~~g~~~~~~~~~~-~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 552 (571)
-..+..++... --+. ..+....+..-+.|+|++.|.+|+.||+-+..++++...++ ..++..||++.|.=..
T Consensus 194 v~p~~~k~i~~-----lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~--~Krl~eFP~gtHNDT~ 266 (300)
T KOG4391|consen 194 VFPFPMKYIPL-----LCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSR--TKRLAEFPDGTHNDTW 266 (300)
T ss_pred eccchhhHHHH-----HHHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchh--hhhheeCCCCccCceE
Confidence 00111111100 0001 11222334455679999999999999999999988876544 4577899999997422
Q ss_pred CCcHHHHHHHHHHHHHH
Q 008274 553 HRDRIYMEERIWEFIER 569 (571)
Q Consensus 553 ~~~~~~~~~~i~~fl~~ 569 (571)
-....++.|.+||.+
T Consensus 267 --i~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 267 --ICDGYFQAIEDFLAE 281 (300)
T ss_pred --EeccHHHHHHHHHHH
Confidence 123456777788765
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-17 Score=159.29 Aligned_cols=236 Identities=15% Similarity=0.105 Sum_probs=143.8
Q ss_pred hccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEEC
Q 008274 311 IKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLD 390 (571)
Q Consensus 311 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d 390 (571)
++++.+ ..+.+.+...+|..+...+. ..+. ...|.||++||.+.... .|...+..|.++||.|+++|
T Consensus 14 ~~~~~~-~~~~~~~~~~~~~~~~i~y~-~~G~----~~~~~lvliHG~~~~~~-------~w~~~~~~L~~~gy~vi~~D 80 (302)
T PRK00870 14 LPDYPF-APHYVDVDDGDGGPLRMHYV-DEGP----ADGPPVLLLHGEPSWSY-------LYRKMIPILAAAGHRVIAPD 80 (302)
T ss_pred CcCCCC-CceeEeecCCCCceEEEEEE-ecCC----CCCCEEEEECCCCCchh-------hHHHHHHHHHhCCCEEEEEC
Confidence 333434 45556666655654333222 2221 12367899999765432 35667788888899999999
Q ss_pred CCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 391 NRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 391 ~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
+||+|.+..... ......++..+.+..+.++- +.+++.++|||+||.+++.++.++|+++++++..++....
T Consensus 81 l~G~G~S~~~~~------~~~~~~~~~a~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 152 (302)
T PRK00870 81 LIGFGRSDKPTR------REDYTYARHVEWMRSWFEQL--DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPT 152 (302)
T ss_pred CCCCCCCCCCCC------cccCCHHHHHHHHHHHHHHc--CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCC
Confidence 999997743110 01122444444444444432 4568999999999999999999999999999887753211
Q ss_pred cc------ccch-----------hhhhhc-CCC-CCC---hhhh-------------------ccC---C--------cc
Q 008274 471 DG------YDTF-----------YTEKYM-GLP-SED---PVGY-------------------EYS---S--------VM 498 (571)
Q Consensus 471 ~~------~~~~-----------~~~~~~-g~~-~~~---~~~~-------------------~~~---s--------~~ 498 (571)
.. +..+ ...... +.. ... ...| ... + ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (302)
T PRK00870 153 GDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAW 232 (302)
T ss_pred ccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHH
Confidence 00 0000 000000 000 000 0000 000 0 01
Q ss_pred hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 499 HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 499 ~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
..+.++++|+|+++|++|..++... ..+.+.+... ....+.+++++||.+ ..++.+.+.+.+.+||+++
T Consensus 233 ~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~-~~~~~~~i~~~gH~~-~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 233 AVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGA-AGQPHPTIKGAGHFL-QEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HhhhcCCCceEEEecCCCCcccCch-HHHHhhcccc-cccceeeecCCCccc-hhhChHHHHHHHHHHHhcC
Confidence 2346788999999999999999765 6666655321 123477899999997 5577789999999999875
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=164.93 Aligned_cols=237 Identities=19% Similarity=0.126 Sum_probs=150.7
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+...+...||..+...++.+... ..+...|+||++||..++.. ..| +...+..+.++||.|+++|+||+|++
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~--~~y---~~~~~~~~~~~g~~vv~~d~rG~G~s 143 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSD--DSY---VRHMLLRARSKGWRVVVFNSRGCADS 143 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCC--CHH---HHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 4466678888998887655543221 11134589999999766532 111 22345566789999999999999877
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCe--eEEEEEcCccCCcc----
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDV--FQCAVSGAPVTSWD---- 471 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~--~~~~v~~~~~~~~~---- 471 (571)
...- ...+.....+|+.++++++..+. ...++.++|||+||.+++.++.++++. +.+++++++..+..
T Consensus 144 ~~~~----~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~ 217 (388)
T PLN02511 144 PVTT----PQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADE 217 (388)
T ss_pred CCCC----cCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHH
Confidence 4311 11112334789999999998763 346899999999999999999999876 67776665544321
Q ss_pred --------cccchhh----------hhhcC-CC---------------------------CCCh-hhhccCCcchhhccC
Q 008274 472 --------GYDTFYT----------EKYMG-LP---------------------------SEDP-VGYEYSSVMHHVHKM 504 (571)
Q Consensus 472 --------~~~~~~~----------~~~~g-~~---------------------------~~~~-~~~~~~s~~~~~~~~ 504 (571)
.+...+. ...+. .+ .... +.|...++...+.+|
T Consensus 218 ~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I 297 (388)
T PLN02511 218 DFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHV 297 (388)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccC
Confidence 0000000 00000 00 0011 123345566678889
Q ss_pred CCcEEEEecCCCCCCChHHH-HHHHHHHHHcCCCeeEEEcCCCCCCCCCCC--c---HHHHHHHHHHHHHHh
Q 008274 505 KGKLLLVHGMIDENVHFRHT-ARLINALVAARKPYEILIFPDERHMPRRHR--D---RIYMEERIWEFIERT 570 (571)
Q Consensus 505 ~~p~lli~G~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~---~~~~~~~i~~fl~~~ 570 (571)
++|+|+|+|++|++++.... ..+. +...++++++++++||...... . ...+.+.+.+||+..
T Consensus 298 ~vPtLiI~g~dDpi~p~~~~~~~~~----~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 298 RVPLLCIQAANDPIAPARGIPREDI----KANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred CCCeEEEEcCCCCcCCcccCcHhHH----hcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 99999999999999987643 2222 2346889999999999752211 1 123567788888653
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-16 Score=161.47 Aligned_cols=193 Identities=15% Similarity=0.148 Sum_probs=139.3
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeE--EEEEEeccCccEEEEEEECCCCceEEEEEeecCCe
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNIL--TAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW 157 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~--i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w 157 (571)
.+||++|.++++.++++. .......|.|||||+. +++++.+.+ ..+||++|+++|+.++|+......
T Consensus 165 ~~l~~~d~dG~~~~~lt~---------~~~~~~sP~wSPDG~~~~~~y~S~~~g-~~~I~~~~l~~g~~~~lt~~~g~~- 233 (428)
T PRK01029 165 GELWSVDYDGQNLRPLTQ---------EHSLSITPTWMHIGSGFPYLYVSYKLG-VPKIFLGSLENPAGKKILALQGNQ- 233 (428)
T ss_pred ceEEEEcCCCCCceEccc---------CCCCcccceEccCCCceEEEEEEccCC-CceEEEEECCCCCceEeecCCCCc-
Confidence 479999999999988854 3344567999999985 556777663 578999999999999997643321
Q ss_pred eeccCCcccCCCCCccCCCe--EEEEEecCCccEEEEE--eCCC---ceeeceeecCeEE-EEEEEEeecCcEEEEEEcC
Q 008274 158 VNLHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLH--DING---TCLGPITEGDWMV-EQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~--~~~~---~~~~~lT~~~~~~-~~~~~~s~dg~~l~~~~~~ 229 (571)
+.| .|+||+ ++|.+++.|..++|+. ++++ ++.++||.+.... ..+ .|||||+.|+|.+++
T Consensus 234 ------~~p-----~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p-~wSPDG~~Laf~s~~ 301 (428)
T PRK01029 234 ------LMP-----TFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNP-SFSPDGTRLVFVSNK 301 (428)
T ss_pred ------cce-----EECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCe-EECCCCCEEEEEECC
Confidence 111 456665 8888888888888885 4443 4678888765433 344 599999999999987
Q ss_pred CCCceeEEEEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 230 DGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 230 ~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
++. .+||.+++...+. ..++++...+ ...+.+||||++++|..... ...+|+++++.+++ .+.|+.
T Consensus 302 ~g~--~~ly~~~~~~~g~----~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~-g~~~I~v~dl~~g~-~~~Lt~ 368 (428)
T PRK01029 302 DGR--PRIYIMQIDPEGQ----SPRLLTKKYRNSSCPAWSPDGKKIAFCSVIK-GVRQICVYDLATGR-DYQLTT 368 (428)
T ss_pred CCC--ceEEEEECccccc----ceEEeccCCCCccceeECCCCCEEEEEEcCC-CCcEEEEEECCCCC-eEEccC
Confidence 664 6899988732222 4677886543 34568999999999987553 34689999996665 466654
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-16 Score=158.21 Aligned_cols=192 Identities=14% Similarity=0.086 Sum_probs=142.3
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeE-EEEEEeccCccEEEEEEECCCCceEEEEEeecCCe
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNIL-TAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW 157 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~-i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w 157 (571)
..+|++.|.++...+.++. .. ....+.|||||+. +++.+.+. ...+||++|+++|+.++|+..... .
T Consensus 168 ~~~l~~~d~dg~~~~~~~~---------~~-~~~~p~wSpDG~~~i~y~s~~~-~~~~Iyv~dl~tg~~~~lt~~~g~-~ 235 (419)
T PRK04043 168 KSNIVLADYTLTYQKVIVK---------GG-LNIFPKWANKEQTAFYYTSYGE-RKPTLYKYNLYTGKKEKIASSQGM-L 235 (419)
T ss_pred cceEEEECCCCCceeEEcc---------CC-CeEeEEECCCCCcEEEEEEccC-CCCEEEEEECCCCcEEEEecCCCc-E
Confidence 3589999999988777643 22 5667999999985 66766654 245899999999999999763221 1
Q ss_pred eeccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 158 VNLHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
. .+ .|++|+ +++...+.|..+||++++++++.++||........+ .|+|||+.|+|++++.+. .
T Consensus 236 ~--~~---------~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p-~~SPDG~~I~F~Sdr~g~--~ 301 (419)
T PRK04043 236 V--VS---------DVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNG-NFVEDDKRIVFVSDRLGY--P 301 (419)
T ss_pred E--ee---------EECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCcc-EECCCCCEEEEEECCCCC--c
Confidence 0 01 244554 777777788899999999999999999876422333 599999999999998764 8
Q ss_pred EEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCC-----CCCEEEEEEcCCCceeEeccCC
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLD-----SPPRILLCSLQDGSLVLPLYEQ 304 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~-----~p~~l~~~~~~~~~~~~~l~~~ 304 (571)
+||++++ +++ ..++++.... ....+||||++++|+..... ....|+++++.+++ .+.|+..
T Consensus 302 ~Iy~~dl--~~g----~~~rlt~~g~-~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~-~~~LT~~ 367 (419)
T PRK04043 302 NIFMKKL--NSG----SVEQVVFHGK-NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY-IRRLTAN 367 (419)
T ss_pred eEEEEEC--CCC----CeEeCccCCC-cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC-eEECCCC
Confidence 9999999 444 5667876432 34589999999999876532 33689999986665 5677653
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.1e-17 Score=162.65 Aligned_cols=208 Identities=14% Similarity=0.055 Sum_probs=154.7
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||+.|+|+....++. .+++++|+++++...+..
T Consensus 195 ~~~p~ws~~~~~~~y~~f~~~~~--------------------------------~~i~~~~l~~g~~~~i~~------- 235 (425)
T COG0823 195 ILTPAWSPDGKKLAYVSFELGGC--------------------------------PRIYYLDLNTGKRPVILN------- 235 (425)
T ss_pred eeccccCcCCCceEEEEEecCCC--------------------------------ceEEEEeccCCccceeec-------
Confidence 34578999999999987654441 257999999887665522
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWAS 182 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s 182 (571)
.......|.|||||++++|+..|+ ...+||++|+.+++.++|+....... .+ +|++|| ++|.|
T Consensus 236 --~~g~~~~P~fspDG~~l~f~~~rd-g~~~iy~~dl~~~~~~~Lt~~~gi~~---~P---------s~spdG~~ivf~S 300 (425)
T COG0823 236 --FNGNNGAPAFSPDGSKLAFSSSRD-GSPDIYLMDLDGKNLPRLTNGFGINT---SP---------SWSPDGSKIVFTS 300 (425)
T ss_pred --cCCccCCccCCCCCCEEEEEECCC-CCccEEEEcCCCCcceecccCCcccc---Cc---------cCCCCCCEEEEEe
Confidence 344556689999999999999998 56789999999999877766433211 22 455555 99999
Q ss_pred ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCce
Q 008274 183 EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGK 262 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~ 262 (571)
++.|..+||+++++++..+++|....... .+.|||||++|.|.+...+ +.++...++.+++ ..+.++.....
T Consensus 301 dr~G~p~I~~~~~~g~~~~riT~~~~~~~-~p~~SpdG~~i~~~~~~~g--~~~i~~~~~~~~~-----~~~~lt~~~~~ 372 (425)
T COG0823 301 DRGGRPQIYLYDLEGSQVTRLTFSGGGNS-NPVWSPDGDKIVFESSSGG--QWDIDKNDLASGG-----KIRILTSTYLN 372 (425)
T ss_pred CCCCCcceEEECCCCCceeEeeccCCCCc-CccCCCCCCEEEEEeccCC--ceeeEEeccCCCC-----cEEEccccccC
Confidence 99999999999999999999998533222 4569999999999996544 3778888773322 35677765555
Q ss_pred EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 263 HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 263 ~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
...+++++|+.++|..... .-+.++.+.+ +++
T Consensus 373 e~ps~~~ng~~i~~~s~~~-~~~~l~~~s~-~g~ 404 (425)
T COG0823 373 ESPSWAPNGRMIMFSSGQG-GGSVLSLVSL-DGR 404 (425)
T ss_pred CCCCcCCCCceEEEeccCC-CCceEEEeec-cce
Confidence 5679999999999987776 3446666665 444
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.9e-17 Score=175.98 Aligned_cols=191 Identities=19% Similarity=0.280 Sum_probs=145.4
Q ss_pred hhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC--CCc------------CCcEEEEee
Q 008274 375 RAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG--LAK------------VGHIGLYGW 440 (571)
Q Consensus 375 ~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~d------------~~~i~l~G~ 440 (571)
+.++++.+||+|+.+|.||+++|++.+.. .+..+.+|..++|+|+..+. +.| ..+|+++|.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-----~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~ 345 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTT-----GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGK 345 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCcc-----CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEE
Confidence 36889999999999999999998775532 22345789999999998531 123 579999999
Q ss_pred chHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-c--------hh--------hh----hhc--CC-------------
Q 008274 441 SYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-T--------FY--------TE----KYM--GL------------- 484 (571)
Q Consensus 441 S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-~--------~~--------~~----~~~--g~------------- 484 (571)
||||++++.+|+..|+.++|+|..+++.+|..+. . .| .+ +.. +.
T Consensus 346 SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~ 425 (767)
T PRK05371 346 SYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLA 425 (767)
T ss_pred cHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHh
Confidence 9999999999998889999999999998764211 0 00 00 000 00
Q ss_pred -----C----CCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCc
Q 008274 485 -----P----SEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRD 555 (571)
Q Consensus 485 -----~----~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 555 (571)
. ....+.|...+++.+++++++|+|++||..|.++++.++.+++++|++.+.+.++.+.++ +|.......
T Consensus 426 ~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g-~H~~~~~~~ 504 (767)
T PRK05371 426 ELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQG-GHVYPNNWQ 504 (767)
T ss_pred hhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCC-CccCCCchh
Confidence 0 001123455677788999999999999999999999999999999999888999877766 786544445
Q ss_pred HHHHHHHHHHHHHHhC
Q 008274 556 RIYMEERIWEFIERTL 571 (571)
Q Consensus 556 ~~~~~~~i~~fl~~~l 571 (571)
..++.+.+.+||+++|
T Consensus 505 ~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 505 SIDFRDTMNAWFTHKL 520 (767)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 6778899999999886
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.9e-17 Score=158.33 Aligned_cols=201 Identities=16% Similarity=0.192 Sum_probs=130.2
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|...+. ....+++.||.|+++|+||+|.+...... ........+|+.++++.+
T Consensus 31 ~~ivllHG~~~~~~---~~~~~~~-~~~~l~~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~~l~~l----- 98 (282)
T TIGR03343 31 EAVIMLHGGGPGAG---GWSNYYR-NIGPFVDAGYRVILKDSPGFNKSDAVVMD---EQRGLVNARAVKGLMDAL----- 98 (282)
T ss_pred CeEEEECCCCCchh---hHHHHHH-HHHHHHhCCCEEEEECCCCCCCCCCCcCc---ccccchhHHHHHHHHHHc-----
Confidence 56889999765532 3322111 23456678999999999999887532110 000011234454444443
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc-c--------cchh-------h---hhhcC----CC-
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG-Y--------DTFY-------T---EKYMG----LP- 485 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~-~--------~~~~-------~---~~~~g----~~- 485 (571)
+.+++.++||||||.+++.++.++|++++++|+.+|...... . ...+ . ..++. .+
T Consensus 99 -~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (282)
T TIGR03343 99 -DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQS 177 (282)
T ss_pred -CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcc
Confidence 567999999999999999999999999999998876421100 0 0000 0 00000 00
Q ss_pred CCC--------------hh---hh---------ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCee
Q 008274 486 SED--------------PV---GY---------EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539 (571)
Q Consensus 486 ~~~--------------~~---~~---------~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 539 (571)
... +. .+ ...+....+.++++|+|+++|++|..++++.++++.+.+ .+++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~----~~~~ 253 (282)
T TIGR03343 178 LITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNM----PDAQ 253 (282)
T ss_pred cCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhC----CCCE
Confidence 000 00 00 011122346678899999999999999998888887765 5789
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+++++++||.+ ..+....+.+.+.+||.
T Consensus 254 ~~~i~~agH~~-~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 254 LHVFSRCGHWA-QWEHADAFNRLVIDFLR 281 (282)
T ss_pred EEEeCCCCcCC-cccCHHHHHHHHHHHhh
Confidence 99999999997 56778889999999986
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=153.08 Aligned_cols=231 Identities=16% Similarity=0.140 Sum_probs=145.0
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
+.+.++. +|..+.+.++.|... ++ |.||++|||+.... ..+ ..+..+++.|+++||.|+++|+||+|.+..
T Consensus 3 ~~~~~~~-~~~~l~g~~~~p~~~----~~-~~vv~i~gg~~~~~--g~~-~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~ 73 (274)
T TIGR03100 3 RALTFSC-EGETLVGVLHIPGAS----HT-TGVLIVVGGPQYRV--GSH-RQFVLLARRLAEAGFPVLRFDYRGMGDSEG 73 (274)
T ss_pred eeEEEEc-CCcEEEEEEEcCCCC----CC-CeEEEEeCCccccC--Cch-hHHHHHHHHHHHCCCEEEEeCCCCCCCCCC
Confidence 4567775 567899999999752 23 45666777654322 111 123446788999999999999999987653
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-c----
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY-D---- 474 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~-~---- 474 (571)
... ... ...+|+.++++++.++.. ..++++++|||+||.+++.++.. +..++++|+.+|...-... .
T Consensus 74 ~~~--~~~----~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~ 145 (274)
T TIGR03100 74 ENL--GFE----GIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRI 145 (274)
T ss_pred CCC--CHH----HHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHH
Confidence 211 111 125789999999976521 23579999999999999988764 5678999999887431110 0
Q ss_pred -chhh---------hhh-cCCCCCC--hhhhc-------c-----------CCcchhhccCCCcEEEEecCCCCCCChHH
Q 008274 475 -TFYT---------EKY-MGLPSED--PVGYE-------Y-----------SSVMHHVHKMKGKLLLVHGMIDENVHFRH 523 (571)
Q Consensus 475 -~~~~---------~~~-~g~~~~~--~~~~~-------~-----------~s~~~~~~~~~~p~lli~G~~D~~v~~~~ 523 (571)
..+. .++ .|..... ...+. . ......+..+++|+|+++|+.|...+...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~ 225 (274)
T TIGR03100 146 RHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFA 225 (274)
T ss_pred HHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHH
Confidence 0000 111 1110000 00000 0 00112345678899999999998753111
Q ss_pred H-----HHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 524 T-----ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 524 ~-----~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
. ..+.+.+. ..++++..+|+++|.+.....+..+.+.|.+||++
T Consensus 226 ~~~~~~~~~~~~l~--~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 226 DSVLGEPAWRGALE--DPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HHhccChhhHHHhh--cCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 0 12222221 25788999999999887778889999999999963
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.9e-17 Score=160.53 Aligned_cols=234 Identities=15% Similarity=0.126 Sum_probs=146.4
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccccc-----------------ccc----hhhhHHHHhC
Q 008274 324 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWI-----------------NTV----DMRAQYLRSK 382 (571)
Q Consensus 324 ~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~-----------------~~~----~~~~~~l~~~ 382 (571)
|.+.||..|..+.|.|+. +..+|+++||....... .|. .+| ..+++.|+++
T Consensus 2 ~~~~~g~~l~~~~~~~~~------~kg~v~i~HG~~eh~~~--~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~ 73 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKN------AIGIIVLIHGLKSHLRL--QFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKN 73 (332)
T ss_pred ccCCCCCeEEEeeeeccC------CeEEEEEECCCchhhhh--hhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHC
Confidence 456789999999998852 45799999995544320 000 011 3468899999
Q ss_pred CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc------------------CCCcCCcEEEEeechHH
Q 008274 383 GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ------------------GLAKVGHIGLYGWSYGG 444 (571)
Q Consensus 383 G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~------------------~~~d~~~i~l~G~S~GG 444 (571)
||.|+++|.||+|.+...-.....-..-...++|+.+.++.+.+. .+-+..+++|+||||||
T Consensus 74 G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg 153 (332)
T TIGR01607 74 GYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGG 153 (332)
T ss_pred CCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCcc
Confidence 999999999999976532100000000011246677777766541 11114579999999999
Q ss_pred HHHHHHHhcCCC--------eeEEEEEcCccCCcccc--------cch----------hhhhh-cCC-C--CCCh---hh
Q 008274 445 YLSAITLARFPD--------VFQCAVSGAPVTSWDGY--------DTF----------YTEKY-MGL-P--SEDP---VG 491 (571)
Q Consensus 445 ~~a~~~~~~~~~--------~~~~~v~~~~~~~~~~~--------~~~----------~~~~~-~g~-~--~~~~---~~ 491 (571)
.+++.++..++. .++++|+.+|....... ... +...+ .+. . ..++ +.
T Consensus 154 ~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 233 (332)
T TIGR01607 154 NIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDI 233 (332)
T ss_pred HHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhH
Confidence 999998865432 57888877776432110 000 00000 000 0 0000 00
Q ss_pred hccCCc----------------------chhhccC--CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCC
Q 008274 492 YEYSSV----------------------MHHVHKM--KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDER 547 (571)
Q Consensus 492 ~~~~s~----------------------~~~~~~~--~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 547 (571)
+ ..+| ...+.++ +.|+|++||++|.+++++.+..+++++.. .+.++++|++++
T Consensus 234 ~-~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~--~~~~l~~~~g~~ 310 (332)
T TIGR01607 234 I-KFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSI--SNKELHTLEDMD 310 (332)
T ss_pred H-hcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccC--CCcEEEEECCCC
Confidence 0 0011 1123445 57999999999999999998888776532 467888999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHH
Q 008274 548 HMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 548 H~~~~~~~~~~~~~~i~~fl~ 568 (571)
|.+........+.+.+.+||+
T Consensus 311 H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 311 HVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCccCCCHHHHHHHHHHHhh
Confidence 998766667889999999986
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.3e-17 Score=140.30 Aligned_cols=145 Identities=23% Similarity=0.220 Sum_probs=112.7
Q ss_pred EEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCC
Q 008274 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA 430 (571)
Q Consensus 351 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 430 (571)
+||++||+..+.. .+..+++.|+++||.|+.+|+|+.+.+.. ..++.++++.+.....
T Consensus 1 ~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~- 58 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-------DYQPLAEALAEQGYAVVAFDYPGHGDSDG--------------ADAVERVLADIRAGYP- 58 (145)
T ss_dssp EEEEECTTTTTTH-------HHHHHHHHHHHTTEEEEEESCTTSTTSHH--------------SHHHHHHHHHHHHHHC-
T ss_pred CEEEECCCCCCHH-------HHHHHHHHHHHCCCEEEEEecCCCCccch--------------hHHHHHHHHHHHhhcC-
Confidence 5788999877533 34567899999999999999999887632 2245555555533222
Q ss_pred cCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEE
Q 008274 431 KVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLL 510 (571)
Q Consensus 431 d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~ll 510 (571)
|.++++++|||+||.+++.++.++ ..++++|+.+|..+ ...+.+.+.|+++
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~----------------------------~~~~~~~~~pv~~ 109 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD----------------------------SEDLAKIRIPVLF 109 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG----------------------------CHHHTTTTSEEEE
T ss_pred CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc----------------------------hhhhhccCCcEEE
Confidence 889999999999999999999987 77899999887200 1234566679999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 511 VHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 511 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
++|++|..+++++..++++++ ..+.++.++++++|+
T Consensus 110 i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 110 IHGENDPLVPPEQVRRLYEAL---PGPKELYIIPGAGHF 145 (145)
T ss_dssp EEETT-SSSHHHHHHHHHHHH---CSSEEEEEETTS-TT
T ss_pred EEECCCCcCCHHHHHHHHHHc---CCCcEEEEeCCCcCc
Confidence 999999999999999998888 467899999999995
|
... |
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.3e-17 Score=154.34 Aligned_cols=200 Identities=15% Similarity=0.167 Sum_probs=130.8
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
+.|+||++||.+++.. . |...+..|. +||.|+++|+||+|.+..... .....+|..+.+..++++
T Consensus 12 ~~~~iv~lhG~~~~~~---~----~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~i~~ 76 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGS---Y----WAPQLDVLT-QRFHVVTYDHRGTGRSPGELP-------PGYSIAHMADDVLQLLDA 76 (257)
T ss_pred CCCEEEEEcCCCcchh---H----HHHHHHHHH-hccEEEEEcCCCCCCCCCCCc-------ccCCHHHHHHHHHHHHHH
Confidence 4588999999776532 2 333445554 589999999999988753211 112244444444444433
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc-hh------------------------hhhhc
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT-FY------------------------TEKYM 482 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~------------------------~~~~~ 482 (571)
. +..++.++|||+||.+++.++.++|+.++++|+.++......... .+ ...++
T Consensus 77 ~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
T TIGR03611 77 L--NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWI 154 (257)
T ss_pred h--CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHh
Confidence 2 456899999999999999999999999999888876543211000 00 00000
Q ss_pred CC--C------------CCCh-------hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEE
Q 008274 483 GL--P------------SEDP-------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 541 (571)
Q Consensus 483 g~--~------------~~~~-------~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 541 (571)
.. + .... ......+....+.++++|+|+++|++|..++++.++.+++.+ .+.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~ 230 (257)
T TIGR03611 155 SENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL----PNAQLK 230 (257)
T ss_pred hccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc----CCceEE
Confidence 00 0 0000 001112223446678899999999999999999888887765 356888
Q ss_pred EcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 542 IFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 542 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.++++||.+. .++...+.+.+.+||++
T Consensus 231 ~~~~~gH~~~-~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 231 LLPYGGHASN-VTDPETFNRALLDFLKT 257 (257)
T ss_pred EECCCCCCcc-ccCHHHHHHHHHHHhcC
Confidence 9999999873 46778889999999863
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.5e-16 Score=159.78 Aligned_cols=205 Identities=12% Similarity=0.090 Sum_probs=141.8
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||++|||++.++.. .+|+++|+++++.+.+..
T Consensus 206 v~~p~wSPDG~~la~~s~~~~~---------------------------------~~i~i~dl~tg~~~~l~~------- 245 (429)
T PRK01742 206 LMSPAWSPDGSKLAYVSFENKK---------------------------------SQLVVHDLRSGARKVVAS------- 245 (429)
T ss_pred cccceEcCCCCEEEEEEecCCC---------------------------------cEEEEEeCCCCceEEEec-------
Confidence 3568899999999998754221 268999999988776643
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWAS 182 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s 182 (571)
.......+.|||||+.|++...++ +..+||.+|+++++.++|+..... ...+ .|++|+ ++|.+
T Consensus 246 --~~g~~~~~~wSPDG~~La~~~~~~-g~~~Iy~~d~~~~~~~~lt~~~~~---~~~~---------~wSpDG~~i~f~s 310 (429)
T PRK01742 246 --FRGHNGAPAFSPDGSRLAFASSKD-GVLNIYVMGANGGTPSQLTSGAGN---NTEP---------SWSPDGQSILFTS 310 (429)
T ss_pred --CCCccCceeECCCCCEEEEEEecC-CcEEEEEEECCCCCeEeeccCCCC---cCCE---------EECCCCCEEEEEE
Confidence 122334689999999988876554 346799999999998888753221 1111 345554 78888
Q ss_pred ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCce
Q 008274 183 EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGK 262 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~ 262 (571)
++.|..+||.++..++..++++... .. ..|+|||++|++.+. .+++.+++ .+. ..++++.....
T Consensus 311 ~~~g~~~I~~~~~~~~~~~~l~~~~---~~-~~~SpDG~~ia~~~~------~~i~~~Dl--~~g----~~~~lt~~~~~ 374 (429)
T PRK01742 311 DRSGSPQVYRMSASGGGASLVGGRG---YS-AQISADGKTLVMING------DNVVKQDL--TSG----STEVLSSTFLD 374 (429)
T ss_pred CCCCCceEEEEECCCCCeEEecCCC---CC-ccCCCCCCEEEEEcC------CCEEEEEC--CCC----CeEEecCCCCC
Confidence 8889999999998887777775432 12 359999999999865 34677887 332 44556543223
Q ss_pred EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 263 HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 263 ~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
..++|||||+.+++.... .....+++.+. +|+..+.|.
T Consensus 375 ~~~~~sPdG~~i~~~s~~-g~~~~l~~~~~-~G~~~~~l~ 412 (429)
T PRK01742 375 ESPSISPNGIMIIYSSTQ-GLGKVLQLVSA-DGRFKARLP 412 (429)
T ss_pred CCceECCCCCEEEEEEcC-CCceEEEEEEC-CCCceEEcc
Confidence 456899999999887653 34445666665 566566664
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.5e-17 Score=156.41 Aligned_cols=205 Identities=12% Similarity=-0.003 Sum_probs=132.2
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|...+..|++. |.|+++|+||+|.+...-...... .....++|+.+.+..++++-
T Consensus 30 ~~vlllHG~~~~~~-------~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~-~~~~~~~~~a~~l~~~l~~l- 99 (294)
T PLN02824 30 PALVLVHGFGGNAD-------HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPP-NSFYTFETWGEQLNDFCSDV- 99 (294)
T ss_pred CeEEEECCCCCChh-------HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccc-cccCCHHHHHHHHHHHHHHh-
Confidence 67899999877643 345567777765 699999999999875321000000 01223455555555554432
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc---ccc----c-------ch----------hh-------
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW---DGY----D-------TF----------YT------- 478 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~---~~~----~-------~~----------~~------- 478 (571)
..+++.++||||||.+++.++.++|++++++|+.++.... ... . .. +.
T Consensus 100 -~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (294)
T PLN02824 100 -VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPET 178 (294)
T ss_pred -cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHH
Confidence 2368999999999999999999999999999998764310 000 0 00 00
Q ss_pred -hhh----cCCC-CCChh----------------hhc---cC----CcchhhccCCCcEEEEecCCCCCCChHHHHHHHH
Q 008274 479 -EKY----MGLP-SEDPV----------------GYE---YS----SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLIN 529 (571)
Q Consensus 479 -~~~----~g~~-~~~~~----------------~~~---~~----s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~ 529 (571)
... .+.. ....+ .+. .. .....+.++++|+|+++|++|..++.+.+..+.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~ 258 (294)
T PLN02824 179 VKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYAN 258 (294)
T ss_pred HHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHh
Confidence 000 0000 00000 000 00 1123366788999999999999999887766544
Q ss_pred HHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 530 ALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
. ....++.+++++||.. ..++...+.+.+.+||+++
T Consensus 259 ~----~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 259 F----DAVEDFIVLPGVGHCP-QDEAPELVNPLIESFVARH 294 (294)
T ss_pred c----CCccceEEeCCCCCCh-hhhCHHHHHHHHHHHHhcC
Confidence 2 3446889999999987 5578889999999999874
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.7e-17 Score=157.23 Aligned_cols=230 Identities=18% Similarity=0.249 Sum_probs=141.6
Q ss_pred CCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC
Q 008274 315 QLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT 394 (571)
Q Consensus 315 ~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 394 (571)
.....+.+.|+..+ ..|++++..|+.. ++.|+||++-|..+.+. . .+..+..+++.+|++++++|.||.
T Consensus 161 ~~~~i~~v~iP~eg-~~I~g~LhlP~~~----~p~P~VIv~gGlDs~qe---D---~~~l~~~~l~~rGiA~LtvDmPG~ 229 (411)
T PF06500_consen 161 SDYPIEEVEIPFEG-KTIPGYLHLPSGE----KPYPTVIVCGGLDSLQE---D---LYRLFRDYLAPRGIAMLTVDMPGQ 229 (411)
T ss_dssp SSSEEEEEEEEETT-CEEEEEEEESSSS----S-EEEEEEE--TTS-GG---G---GHHHHHCCCHHCT-EEEEE--TTS
T ss_pred CCCCcEEEEEeeCC-cEEEEEEEcCCCC----CCCCEEEEeCCcchhHH---H---HHHHHHHHHHhCCCEEEEEccCCC
Confidence 34567889999855 8899999999843 78999998766444332 1 122234568899999999999999
Q ss_pred CCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC-Cccc-
Q 008274 395 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT-SWDG- 472 (571)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~-~~~~- 472 (571)
|.+.... ... ..-.-..+.+++|.+.+++|.+||+++|.|+||++|..+|..++++++++|+..|++ ++..
T Consensus 230 G~s~~~~---l~~----D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~ 302 (411)
T PF06500_consen 230 GESPKWP---LTQ----DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTD 302 (411)
T ss_dssp GGGTTT----S-S-----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-
T ss_pred cccccCC---CCc----CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhcc
Confidence 8653211 111 112235688999999999999999999999999999999987888999988877754 3211
Q ss_pred ------ccchhhh---hhcCCCCCChh----hhccCCcchh--h--ccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC
Q 008274 473 ------YDTFYTE---KYMGLPSEDPV----GYEYSSVMHH--V--HKMKGKLLLVHGMIDENVHFRHTARLINALVAAR 535 (571)
Q Consensus 473 ------~~~~~~~---~~~g~~~~~~~----~~~~~s~~~~--~--~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~ 535 (571)
....+.. ..+|....+.+ .....|.... + .+.++|+|.+.|++|.++|.+.+..++.. +
T Consensus 303 ~~~~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~----s 378 (411)
T PF06500_consen 303 PEWQQRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAES----S 378 (411)
T ss_dssp HHHHTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHT----B
T ss_pred HHHHhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhc----C
Confidence 0111111 11233221211 2234444332 3 45567999999999999999987766543 5
Q ss_pred CCeeEEEcCCCC-CCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 536 KPYEILIFPDER-HMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 536 ~~~~~~~~~~~~-H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.+-+...+|... |. ........+.+||++.|
T Consensus 379 ~~gk~~~~~~~~~~~-----gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 379 TDGKALRIPSKPLHM-----GYPQALDEIYKWLEDKL 410 (411)
T ss_dssp TT-EEEEE-SSSHHH-----HHHHHHHHHHHHHHHHH
T ss_pred CCCceeecCCCcccc-----chHHHHHHHHHHHHHhc
Confidence 556667777644 42 34456778899998764
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.2e-15 Score=153.50 Aligned_cols=191 Identities=17% Similarity=0.148 Sum_probs=143.0
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+|+++|.+++..++++. .......|.|||||+.+++++.+. ....|+++|+++|+.+.|+......
T Consensus 179 ~~l~~~d~dg~~~~~lt~---------~~~~~~~p~wSPDG~~la~~s~~~-g~~~i~i~dl~~G~~~~l~~~~~~~--- 245 (429)
T PRK03629 179 YELRVSDYDGYNQFVVHR---------SPQPLMSPAWSPDGSKLAYVTFES-GRSALVIQTLANGAVRQVASFPRHN--- 245 (429)
T ss_pred eeEEEEcCCCCCCEEeec---------CCCceeeeEEcCCCCEEEEEEecC-CCcEEEEEECCCCCeEEccCCCCCc---
Confidence 589999999988887743 445677899999999999887554 3467999999999988886532210
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
. .+.|++|+ ++|.+.+.|..+||++++++++.++||.+......+ .|+|||+.|+|.+++.+. .+|
T Consensus 246 ~---------~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~-~wSPDG~~I~f~s~~~g~--~~I 313 (429)
T PRK03629 246 G---------APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEP-TWFPDSQNLAYTSDQAGR--PQV 313 (429)
T ss_pred C---------CeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCce-EECCCCCEEEEEeCCCCC--ceE
Confidence 0 11355665 777777788889999999999999999876555555 599999999999987664 799
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
|.+++ ++. ..++++...+ ...+.+||||+++++..... ....++++++.+++ .+.|+.
T Consensus 314 y~~d~--~~g----~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~-g~~~I~~~dl~~g~-~~~Lt~ 372 (429)
T PRK03629 314 YKVNI--NGG----APQRITWEGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATGG-VQVLTD 372 (429)
T ss_pred EEEEC--CCC----CeEEeecCCCCccCEEECCCCCEEEEEEccC-CCceEEEEECCCCC-eEEeCC
Confidence 99998 443 5667775433 23468999999999876543 45689999986665 456653
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.8e-16 Score=158.39 Aligned_cols=211 Identities=15% Similarity=0.087 Sum_probs=148.1
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|||+...... ..|+++|+++++.+.+..
T Consensus 193 ~~p~~Spdg~~la~~~~~~~~---------------------------------~~i~v~d~~~g~~~~~~~-------- 231 (417)
T TIGR02800 193 LSPAWSPDGQKLAYVSFESGK---------------------------------PEIYVQDLATGQREKVAS-------- 231 (417)
T ss_pred ecccCCCCCCEEEEEEcCCCC---------------------------------cEEEEEECCCCCEEEeec--------
Confidence 357799999999997644211 268999999998776643
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC--eEEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG--GFIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d--~~~~~s~ 183 (571)
.......+.|+|||+.+++..... +..+||.+|+++++.++|+..... ...+ .|++| .++|.++
T Consensus 232 -~~~~~~~~~~spDg~~l~~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~---~~~~---------~~s~dg~~l~~~s~ 297 (417)
T TIGR02800 232 -FPGMNGAPAFSPDGSKLAVSLSKD-GNPDIYVMDLDGKQLTRLTNGPGI---DTEP---------SWSPDGKSIAFTSD 297 (417)
T ss_pred -CCCCccceEECCCCCEEEEEECCC-CCccEEEEECCCCCEEECCCCCCC---CCCE---------EECCCCCEEEEEEC
Confidence 223344589999999888776544 345799999999988877643211 1111 23444 3778888
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
+.|..+||++++.+++.++|+........+ .|+|||+.|+|+....+ ..+|+.+++ .+. ..+.++......
T Consensus 298 ~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~-~~spdg~~i~~~~~~~~--~~~i~~~d~--~~~----~~~~l~~~~~~~ 368 (417)
T TIGR02800 298 RGGSPQIYMMDADGGEVRRLTFRGGYNASP-SWSPDGDLIAFVHREGG--GFNIAVMDL--DGG----GERVLTDTGLDE 368 (417)
T ss_pred CCCCceEEEEECCCCCEEEeecCCCCccCe-EECCCCCEEEEEEccCC--ceEEEEEeC--CCC----CeEEccCCCCCC
Confidence 888889999999988888888654333444 49999999999987654 378999998 333 455666543334
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.+.++|||+++++....... ..+++.+. +++..+.+.
T Consensus 369 ~p~~spdg~~l~~~~~~~~~-~~l~~~~~-~g~~~~~~~ 405 (417)
T TIGR02800 369 SPSFAPNGRMILYATTRGGR-GVLGLVST-DGRFRARLP 405 (417)
T ss_pred CceECCCCCEEEEEEeCCCc-EEEEEEEC-CCceeeECC
Confidence 55899999999998876544 57777775 555555543
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-16 Score=153.99 Aligned_cols=212 Identities=13% Similarity=0.090 Sum_probs=134.1
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|.++.+..+. ..|.||++||.+++.. .|...++.|++.+ .|+++|+||+|.+.....
T Consensus 15 ~g~~i~y~~~G---------~g~~vvllHG~~~~~~-------~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~----- 72 (295)
T PRK03592 15 LGSRMAYIETG---------EGDPIVFLHGNPTSSY-------LWRNIIPHLAGLG-RCLAPDLIGMGASDKPDI----- 72 (295)
T ss_pred CCEEEEEEEeC---------CCCEEEEECCCCCCHH-------HHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCC-----
Confidence 66666655432 1257888999876643 3455677888876 999999999998753211
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC---cccccc----hh---
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS---WDGYDT----FY--- 477 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~---~~~~~~----~~--- 477 (571)
....++..+.+..+++.- ..+++.++|||+||.+++.++.++|++++++++.++... +..+.. .+
T Consensus 73 ---~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 147 (295)
T PRK03592 73 ---DYTFADHARYLDAWFDAL--GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQAL 147 (295)
T ss_pred ---CCCHHHHHHHHHHHHHHh--CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHH
Confidence 112344444444444332 346899999999999999999999999999998886321 111000 00
Q ss_pred h----------------hhhcCCC---CCChh---hhc-----------------cCC--------------cchhhccC
Q 008274 478 T----------------EKYMGLP---SEDPV---GYE-----------------YSS--------------VMHHVHKM 504 (571)
Q Consensus 478 ~----------------~~~~g~~---~~~~~---~~~-----------------~~s--------------~~~~~~~~ 504 (571)
. ...+... ....+ .+. ... ....+.++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 227 (295)
T PRK03592 148 RSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATS 227 (295)
T ss_pred hCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccC
Confidence 0 0000000 00000 000 000 01124567
Q ss_pred CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 505 ~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++|+|+++|++|..+++....++...+ ..+.++.+++++||.+. .+..+.+.+.+.+||++.
T Consensus 228 ~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 228 DVPKLLINAEPGAILTTGAIRDWCRSW---PNQLEITVFGAGLHFAQ-EDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred CCCeEEEeccCCcccCcHHHHHHHHHh---hhhcceeeccCcchhhh-hcCHHHHHHHHHHHHHHh
Confidence 899999999999999655555554433 23568889999999984 567889999999999874
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=151.76 Aligned_cols=198 Identities=12% Similarity=0.043 Sum_probs=127.2
Q ss_pred EEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCC
Q 008274 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA 430 (571)
Q Consensus 351 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 430 (571)
.||++||.+.+.. .|...+..|++.||.|+++|+||+|.+..... ....++++.+.+..+++.-
T Consensus 5 ~vvllHG~~~~~~-------~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l-- 68 (255)
T PLN02965 5 HFVFVHGASHGAW-------CWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-------TVSSSDQYNRPLFALLSDL-- 68 (255)
T ss_pred EEEEECCCCCCcC-------cHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-------ccCCHHHHHHHHHHHHHhc--
Confidence 4888999876533 35556788888899999999999997752110 0112344444333333331
Q ss_pred cC-CcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC--Cccc-ccc----------hh-------------------
Q 008274 431 KV-GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT--SWDG-YDT----------FY------------------- 477 (571)
Q Consensus 431 d~-~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~--~~~~-~~~----------~~------------------- 477 (571)
+. .++.++||||||.+++.++.++|++++.+|..++.. .... ... .+
T Consensus 69 ~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (255)
T PLN02965 69 PPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKP 148 (255)
T ss_pred CCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCH
Confidence 23 489999999999999999999999999988876541 1000 000 00
Q ss_pred --h-hhhcCCCCCChhhh----ccCC-------c---chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeE
Q 008274 478 --T-EKYMGLPSEDPVGY----EYSS-------V---MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI 540 (571)
Q Consensus 478 --~-~~~~g~~~~~~~~~----~~~s-------~---~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 540 (571)
. ..+..........+ .... . ...+..+++|+|+++|++|..+++..++.+.+.+ .+.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~----~~a~~ 224 (255)
T PLN02965 149 EFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW----PPAQT 224 (255)
T ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC----CcceE
Confidence 0 00000000000000 0000 0 0123357899999999999999998888877655 45688
Q ss_pred EEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 541 LIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 541 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.+++++||.+ ..++.+.+.+.+.+|++.
T Consensus 225 ~~i~~~GH~~-~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 225 YVLEDSDHSA-FFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred EEecCCCCch-hhcCHHHHHHHHHHHHHH
Confidence 8999999998 457788888999888765
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-17 Score=156.23 Aligned_cols=198 Identities=14% Similarity=0.102 Sum_probs=128.2
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|+||++||.+.+.. .|...++.|. .||.|+++|+||+|.+.... ......+..+.+..+++.
T Consensus 12 ~~~~li~~hg~~~~~~-------~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~--------~~~~~~~~~~~~~~~i~~ 75 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR-------MWDPVLPALT-PDFRVLRYDKRGHGLSDAPE--------GPYSIEDLADDVLALLDH 75 (251)
T ss_pred CCCeEEEEcCcccchh-------hHHHHHHHhh-cccEEEEecCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHH
Confidence 4589999999655533 2344455654 68999999999998764211 122345555555554443
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch------------------hhhhhc----CCC
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF------------------YTEKYM----GLP 485 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------------------~~~~~~----g~~ 485 (571)
- +.+++.++|||+||.+++.++.++|++++++++.++.........+ ....++ ..+
T Consensus 76 ~--~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (251)
T TIGR02427 76 L--GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREA 153 (251)
T ss_pred h--CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccC
Confidence 2 4568999999999999999999999999988877654321110000 000000 000
Q ss_pred C-CChhh-------------------hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCC
Q 008274 486 S-EDPVG-------------------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD 545 (571)
Q Consensus 486 ~-~~~~~-------------------~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 545 (571)
. ...+. +...+....+.++++|+|+++|++|..++.+....+.+.+ .+.+++.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~ 229 (251)
T TIGR02427 154 HPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV----PGARFAEIRG 229 (251)
T ss_pred ChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC----CCceEEEECC
Confidence 0 00000 1111223345678899999999999999998877776654 3568889999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHH
Q 008274 546 ERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 546 ~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
++|.+. .+....+.+.+.+||+
T Consensus 230 ~gH~~~-~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 230 AGHIPC-VEQPEAFNAALRDFLR 251 (251)
T ss_pred CCCccc-ccChHHHHHHHHHHhC
Confidence 999874 4567788888888873
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-16 Score=165.53 Aligned_cols=133 Identities=20% Similarity=0.253 Sum_probs=104.3
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH
Q 008274 325 QANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 325 ~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
++.||.+|.+.++.|++. ++.|+||++||..........+ ....+..|+++||+|+++|+||+|.++..+..
T Consensus 2 ~~~DG~~L~~~~~~P~~~----~~~P~Il~~~gyg~~~~~~~~~---~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~- 73 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGG----GPVPVILSRTPYGKDAGLRWGL---DKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL- 73 (550)
T ss_pred cCCCCCEEEEEEEecCCC----CCCCEEEEecCCCCchhhcccc---ccccHHHHHhCCcEEEEEeccccccCCCceEe-
Confidence 567999999999999753 5789999999865432100011 11235788999999999999999988754321
Q ss_pred HhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 405 IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 405 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
.+....+|+.++++|+.++++.+ .+|+++|+||||.+++.++..+|+.+++++..++..+.
T Consensus 74 ----~~~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 74 ----LGSDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred ----cCcccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 11346899999999999998766 69999999999999999999999999999998887653
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-16 Score=153.09 Aligned_cols=217 Identities=14% Similarity=0.042 Sum_probs=136.0
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
.+...++..+.+....+ .+.|+||++||.+++.. .|......|++ +|.|+++|+||+|.+.....
T Consensus 9 ~~~~~~~~~~~~~~~g~-------~~~~~vv~~hG~~~~~~-------~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~ 73 (278)
T TIGR03056 9 RRVTVGPFHWHVQDMGP-------TAGPLLLLLHGTGASTH-------SWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFR 73 (278)
T ss_pred ceeeECCEEEEEEecCC-------CCCCeEEEEcCCCCCHH-------HHHHHHHHHhh-CcEEEeecCCCCCCCCCccc
Confidence 33344666665443322 12378999999766533 23445666654 79999999999987643211
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc--------c-
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG--------Y- 473 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~--------~- 473 (571)
....++++.+.+..+++.. +.++++|+|||+||.+++.++.++|++++++++.++...... +
T Consensus 74 -------~~~~~~~~~~~l~~~i~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~ 144 (278)
T TIGR03056 74 -------FRFTLPSMAEDLSALCAAE--GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYM 144 (278)
T ss_pred -------cCCCHHHHHHHHHHHHHHc--CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchh
Confidence 1123455555555555442 345789999999999999999999998888887765432100 0
Q ss_pred cch-----hh--------------hhhcC---CCCC--Chhhhc--------------------cCCcchhhccCCCcEE
Q 008274 474 DTF-----YT--------------EKYMG---LPSE--DPVGYE--------------------YSSVMHHVHKMKGKLL 509 (571)
Q Consensus 474 ~~~-----~~--------------~~~~g---~~~~--~~~~~~--------------------~~s~~~~~~~~~~p~l 509 (571)
... +. ...+. .... ....+. .......+.++++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 224 (278)
T TIGR03056 145 ARVLACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLH 224 (278)
T ss_pred hHhhhhcccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEE
Confidence 000 00 00000 0000 000000 0001123566789999
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 510 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 510 li~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+++|++|..+|....+.+.+.+ .+.++..++++||.+. .+....+.+.+.+||+
T Consensus 225 ii~g~~D~~vp~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 225 LIAGEEDKAVPPDESKRAATRV----PTATLHVVPGGGHLVH-EEQADGVVGLILQAAE 278 (278)
T ss_pred EEEeCCCcccCHHHHHHHHHhc----cCCeEEEECCCCCccc-ccCHHHHHHHHHHHhC
Confidence 9999999999998887776654 4568899999999874 4668889999999874
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-15 Score=155.81 Aligned_cols=191 Identities=15% Similarity=0.168 Sum_probs=141.5
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
..+|+++|.+++..++++. ....+..+.|||||+.|++.+.+.. ...||++|+++|+.++|+......
T Consensus 181 ~~~l~~~d~dg~~~~~lt~---------~~~~v~~p~wSpDG~~lay~s~~~g-~~~i~~~dl~~g~~~~l~~~~g~~-- 248 (435)
T PRK05137 181 IKRLAIMDQDGANVRYLTD---------GSSLVLTPRFSPNRQEITYMSYANG-RPRVYLLDLETGQRELVGNFPGMT-- 248 (435)
T ss_pred ceEEEEECCCCCCcEEEec---------CCCCeEeeEECCCCCEEEEEEecCC-CCEEEEEECCCCcEEEeecCCCcc--
Confidence 3589999999988888753 4556788999999999999876543 468999999999988886533211
Q ss_pred eccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 159 NLHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
..+ .|++|+ +++.+.++|..+||++++++++.++||........+ .|+|||++|+|.+++.+. .+
T Consensus 249 -----~~~-----~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~-~~spDG~~i~f~s~~~g~--~~ 315 (435)
T PRK05137 249 -----FAP-----RFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSP-SYSPDGSQIVFESDRSGS--PQ 315 (435)
T ss_pred -----cCc-----EECCCCCEEEEEEecCCCceEEEEECCCCceEEccCCCCccCce-eEcCCCCEEEEEECCCCC--Ce
Confidence 111 345554 777777888899999999999999999866434444 599999999999987664 78
Q ss_pred EEEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
||.+++ ++. ..++++...+ ...+.+||||+++++...... -..++++++..+ ..+.++
T Consensus 316 Iy~~d~--~g~----~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~-~~~i~~~d~~~~-~~~~lt 374 (435)
T PRK05137 316 LYVMNA--DGS----NPRRISFGGGRYSTPVWSPRGDLIAFTKQGGG-QFSIGVMKPDGS-GERILT 374 (435)
T ss_pred EEEEEC--CCC----CeEEeecCCCcccCeEECCCCCEEEEEEcCCC-ceEEEEEECCCC-ceEecc
Confidence 999998 554 5678876543 334689999999999764432 357888887443 345554
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-16 Score=152.22 Aligned_cols=213 Identities=18% Similarity=0.151 Sum_probs=135.0
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|.++++...... ...|.||++||.+++.. .|......|.+ +|.|+++|+||+|.+...-
T Consensus 10 ~~~~~~~~~~~~~------~~~~plvllHG~~~~~~-------~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~------ 69 (276)
T TIGR02240 10 DGQSIRTAVRPGK------EGLTPLLIFNGIGANLE-------LVFPFIEALDP-DLEVIAFDVPGVGGSSTPR------ 69 (276)
T ss_pred CCcEEEEEEecCC------CCCCcEEEEeCCCcchH-------HHHHHHHHhcc-CceEEEECCCCCCCCCCCC------
Confidence 6667777654211 12256788999766543 24445666654 7999999999999875321
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc---cc-------cc--
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD---GY-------DT-- 475 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~---~~-------~~-- 475 (571)
.....+++.+.+..+++.- +.+++.|+||||||.+++.++.++|++++++|+.++..... .. ..
T Consensus 70 --~~~~~~~~~~~~~~~i~~l--~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 145 (276)
T TIGR02240 70 --HPYRFPGLAKLAARMLDYL--DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPR 145 (276)
T ss_pred --CcCcHHHHHHHHHHHHHHh--CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCch
Confidence 0112333333333333321 44679999999999999999999999999999987654211 00 00
Q ss_pred hhh---------hhhcCCCC-CChh---h-------------hc------cCCcchhhccCCCcEEEEecCCCCCCChHH
Q 008274 476 FYT---------EKYMGLPS-EDPV---G-------------YE------YSSVMHHVHKMKGKLLLVHGMIDENVHFRH 523 (571)
Q Consensus 476 ~~~---------~~~~g~~~-~~~~---~-------------~~------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~ 523 (571)
.+. ..+.+... .+++ . +. .......+.++++|+|+++|+.|..+++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~ 225 (276)
T TIGR02240 146 RYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLIN 225 (276)
T ss_pred hhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHH
Confidence 000 00000000 0000 0 00 011123357888999999999999999998
Q ss_pred HHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 524 TARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 524 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.+.+.+ ...+++++++ ||.+ ..+....+.+.+.+|+++.
T Consensus 226 ~~~l~~~~----~~~~~~~i~~-gH~~-~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 226 MRLLAWRI----PNAELHIIDD-GHLF-LITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred HHHHHHhC----CCCEEEEEcC-CCch-hhccHHHHHHHHHHHHHHh
Confidence 88887765 3467778876 9986 4567888999999999864
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.2e-16 Score=152.10 Aligned_cols=224 Identities=17% Similarity=0.171 Sum_probs=154.0
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH
Q 008274 325 QANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 325 ~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
....+..+.+.+|.|.. ....+.|+||++|||++....... ........++..|+.|+.+|||-.....
T Consensus 57 ~~~~~~~~~~~~y~p~~--~~~~~~p~vly~HGGg~~~g~~~~---~~~~~~~~~~~~g~~vv~vdYrlaPe~~------ 125 (312)
T COG0657 57 AGPSGDGVPVRVYRPDR--KAAATAPVVLYLHGGGWVLGSLRT---HDALVARLAAAAGAVVVSVDYRLAPEHP------ 125 (312)
T ss_pred cCCCCCceeEEEECCCC--CCCCCCcEEEEEeCCeeeecChhh---hHHHHHHHHHHcCCEEEecCCCCCCCCC------
Confidence 34455558899999922 122568999999999887553222 1244566677899999999999654331
Q ss_pred HhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCCC----eeEEEEEcCccCCccc-cc--
Q 008274 405 IKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPVTSWDG-YD-- 474 (571)
Q Consensus 405 ~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~~----~~~~~v~~~~~~~~~~-~~-- 474 (571)
-...++|+.++++|+.++ ..+|+++|+|+|+|.||++++.++..-.+ ...+.+.++|..+... ..
T Consensus 126 -----~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~ 200 (312)
T COG0657 126 -----FPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASL 200 (312)
T ss_pred -----CCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccch
Confidence 122378899999999876 35799999999999999999988865332 4577888888877653 10
Q ss_pred ---------------chhhhhhcCCCCCChhhhccCCcchhh--ccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCC
Q 008274 475 ---------------TFYTEKYMGLPSEDPVGYEYSSVMHHV--HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 537 (571)
Q Consensus 475 ---------------~~~~~~~~g~~~~~~~~~~~~s~~~~~--~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~ 537 (571)
.++...+.+...+... ...+|+... .. -.|+++++|+.|...+ ++..+.++|+++|++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~ 275 (312)
T COG0657 201 PGYGEADLLDAAAILAWFADLYLGAAPDRED--PEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVP 275 (312)
T ss_pred hhcCCccccCHHHHHHHHHHHhCcCccccCC--CccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCe
Confidence 0111222221111100 223444332 23 4689999999999988 899999999999999
Q ss_pred eeEEEcCCCCCCCC--CCCcHHHHHHHHHHHHHH
Q 008274 538 YEILIFPDERHMPR--RHRDRIYMEERIWEFIER 569 (571)
Q Consensus 538 ~~~~~~~~~~H~~~--~~~~~~~~~~~i~~fl~~ 569 (571)
+++..+++..|+|. ..........++.+|+..
T Consensus 276 ~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 276 VELRVYPGMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred EEEEEeCCcceeccccCcHHHHHHHHHHHHHHHH
Confidence 99999999999883 322344446677777764
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.9e-16 Score=151.05 Aligned_cols=200 Identities=14% Similarity=0.060 Sum_probs=126.4
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
...|.||++||.+++.. .|...+..|+ .+|.|+.+|+||+|.+..... ....+ ..+|+.++++++
T Consensus 14 ~~~~~iv~lhG~~~~~~-------~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~~-~~~~~----~~~d~~~~l~~l-- 78 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLD-------NLGVLARDLV-NDHDIIQVDMRNHGLSPRDPV-MNYPA----MAQDLLDTLDAL-- 78 (255)
T ss_pred CCCCCEEEECCCCCchh-------HHHHHHHHHh-hCCeEEEECCCCCCCCCCCCC-CCHHH----HHHHHHHHHHHc--
Confidence 35588999999877643 2334455554 579999999999987653211 00001 134455555443
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCcc-CCcc--cccchhh--------------------hhhcC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV-TSWD--GYDTFYT--------------------EKYMG 483 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~-~~~~--~~~~~~~--------------------~~~~g 483 (571)
...++.++|||+||.+++.++.++|++++++++.++. ..+. .....+. ...+.
T Consensus 79 ----~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
T PRK10673 79 ----QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLN 154 (255)
T ss_pred ----CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcC
Confidence 3467999999999999999999999999998886421 1110 0000000 00000
Q ss_pred C---------CCCC------h----hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcC
Q 008274 484 L---------PSED------P----VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544 (571)
Q Consensus 484 ~---------~~~~------~----~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 544 (571)
. .... . ..+........+.++++|+|+++|++|..++.+..+.+.+.+ .+.++.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~ 230 (255)
T PRK10673 155 EEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF----PQARAHVIA 230 (255)
T ss_pred CHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC----CCcEEEEeC
Confidence 0 0000 0 001111111224456789999999999999988777776654 567889999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 545 DERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 545 ~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++||.+ ..+....+.+.+.+||.++
T Consensus 231 ~~gH~~-~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 231 GAGHWV-HAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred CCCCee-eccCHHHHHHHHHHHHhcC
Confidence 999976 4566788999999999763
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-16 Score=152.85 Aligned_cols=212 Identities=23% Similarity=0.298 Sum_probs=139.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccc---ccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDS---WINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~---~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
||.+|.+.+|.| +. ...+++|+||..|+.......... ...........++++||+||..|.||++.|++.+...
T Consensus 1 DGv~L~adv~~P-~~-~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA-DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp TS-EEEEEEEEE----TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCCEEEEEEEec-CC-CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC
Confidence 789999999999 22 233799999999885532210000 0001111123499999999999999999998877543
Q ss_pred HhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc--------ccc-
Q 008274 405 IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG--------YDT- 475 (571)
Q Consensus 405 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~--------~~~- 475 (571)
...+.+|..++|+|+.++++.+ .||+++|.||+|..++.+|+..|..++|++...+..++.. +..
T Consensus 79 -----~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~ 152 (272)
T PF02129_consen 79 -----SPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLG 152 (272)
T ss_dssp -----SHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCC
T ss_pred -----ChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCccccc
Confidence 2234789999999999998754 6999999999999999999988888999999888766432 000
Q ss_pred ---hh------hhhhcCCC-------------------------------------CCChhhhccCCcchhhccCCCcEE
Q 008274 476 ---FY------TEKYMGLP-------------------------------------SEDPVGYEYSSVMHHVHKMKGKLL 509 (571)
Q Consensus 476 ---~~------~~~~~g~~-------------------------------------~~~~~~~~~~s~~~~~~~~~~p~l 509 (571)
.| ........ ....+.+.+.++...+.++++|+|
T Consensus 153 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l 232 (272)
T PF02129_consen 153 FFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPVL 232 (272)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEEE
T ss_pred chhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCEE
Confidence 11 00000000 011233444555566789999999
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHcC-CCeeEEEcCCCCCC
Q 008274 510 LVHGMIDENVHFRHTARLINALVAAR-KPYEILIFPDERHM 549 (571)
Q Consensus 510 li~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~ 549 (571)
++.|-.|.... ..+.+.+++|+..+ ++.++++-|. +|+
T Consensus 233 ~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 233 IVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp EEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESE-STT
T ss_pred EecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCC-CCC
Confidence 99999997777 88999999998887 6778887766 674
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.5e-15 Score=150.22 Aligned_cols=191 Identities=18% Similarity=0.132 Sum_probs=140.2
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+|+++|.++...+.++. ....+..+.|||||+.+++.+.+. ...+||++|+++|+.++|+..... .
T Consensus 198 ~~l~i~d~dG~~~~~l~~---------~~~~~~~p~wSPDG~~La~~s~~~-g~~~L~~~dl~tg~~~~lt~~~g~---~ 264 (448)
T PRK04792 198 YQLMIADYDGYNEQMLLR---------SPEPLMSPAWSPDGRKLAYVSFEN-RKAEIFVQDIYTQVREKVTSFPGI---N 264 (448)
T ss_pred eEEEEEeCCCCCceEeec---------CCCcccCceECCCCCEEEEEEecC-CCcEEEEEECCCCCeEEecCCCCC---c
Confidence 478999999887776643 345667799999999999887664 356899999999998887643211 0
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
.. +.|++|+ +++.++++|..+||++++++++.++||.+......+ .|+|||+.|+|++++.+. .+|
T Consensus 265 ----~~-----~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p-~wSpDG~~I~f~s~~~g~--~~I 332 (448)
T PRK04792 265 ----GA-----PRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEP-SWHPDGKSLIFTSERGGK--PQI 332 (448)
T ss_pred ----CC-----eeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccce-EECCCCCEEEEEECCCCC--ceE
Confidence 01 1345554 777777888899999999999999999865434444 599999999999987664 799
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
|.+++ ++. ..++|+.... .....+||||++++|.... .....|+++++.+++ .+.++.
T Consensus 333 y~~dl--~~g----~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~-~g~~~I~~~dl~~g~-~~~lt~ 391 (448)
T PRK04792 333 YRVNL--ASG----KVSRLTFEGEQNLGGSITPDGRSMIMVNRT-NGKFNIARQDLETGA-MQVLTS 391 (448)
T ss_pred EEEEC--CCC----CEEEEecCCCCCcCeeECCCCCEEEEEEec-CCceEEEEEECCCCC-eEEccC
Confidence 99998 443 5667764322 2345899999999987654 344588999986665 455554
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.5e-16 Score=130.64 Aligned_cols=202 Identities=21% Similarity=0.336 Sum_probs=142.4
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
+.++.+..+.|. +.+. +.|... +..|+.|++|-.|.....++ .......+..|.++||+++.+|+||.|++.
T Consensus 4 ~~~v~i~Gp~G~-le~~-~~~~~~----~~~~iAli~HPHPl~gGtm~--nkvv~~la~~l~~~G~atlRfNfRgVG~S~ 75 (210)
T COG2945 4 MPTVIINGPAGR-LEGR-YEPAKT----PAAPIALICHPHPLFGGTMN--NKVVQTLARALVKRGFATLRFNFRGVGRSQ 75 (210)
T ss_pred CCcEEecCCccc-ceec-cCCCCC----CCCceEEecCCCccccCccC--CHHHHHHHHHHHhCCceEEeeccccccccc
Confidence 455667766553 5554 334332 46789999887543322111 122344577888999999999999999887
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhh
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYT 478 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 478 (571)
++| +.|..+.+|+.++++|+.++.- +..-..+.|+|+|+++++.++.+.|+. ...++.+|..+. ++
T Consensus 76 G~f------D~GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~--~d---- 141 (210)
T COG2945 76 GEF------DNGIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINA--YD---- 141 (210)
T ss_pred Ccc------cCCcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCc--hh----
Confidence 765 3455669999999999998742 333458899999999999999988764 445555555431 00
Q ss_pred hhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHH
Q 008274 479 EKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIY 558 (571)
Q Consensus 479 ~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 558 (571)
+ ..+.....|.++++|+.|+++......++.+ +.+.++++.++++|.|. .....
T Consensus 142 -------------f------s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~-----~~~~~~i~i~~a~HFF~--gKl~~ 195 (210)
T COG2945 142 -------------F------SFLAPCPSPGLVIQGDADDVVDLVAVLKWQE-----SIKITVITIPGADHFFH--GKLIE 195 (210)
T ss_pred -------------h------hhccCCCCCceeEecChhhhhcHHHHHHhhc-----CCCCceEEecCCCceec--ccHHH
Confidence 0 1233345699999999999999887766655 47889999999999883 45667
Q ss_pred HHHHHHHHHH
Q 008274 559 MEERIWEFIE 568 (571)
Q Consensus 559 ~~~~i~~fl~ 568 (571)
+.+.+.+|+.
T Consensus 196 l~~~i~~~l~ 205 (210)
T COG2945 196 LRDTIADFLE 205 (210)
T ss_pred HHHHHHHHhh
Confidence 7888999983
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.70 E-value=5e-16 Score=150.73 Aligned_cols=201 Identities=15% Similarity=0.174 Sum_probs=126.1
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|.||++||++++.. . .+......+.+.||.|+++|+||+|.+....... ....+++..+.+..+.+..
T Consensus 25 ~~~vl~~hG~~g~~~---~---~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 93 (288)
T TIGR01250 25 KIKLLLLHGGPGMSH---E---YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSD-----ELWTIDYFVDELEEVREKL 93 (288)
T ss_pred CCeEEEEcCCCCccH---H---HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCccc-----ccccHHHHHHHHHHHHHHc
Confidence 367888999876542 1 1233455566669999999999998764211000 0123455555555555542
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-----------chhh---h---------------
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-----------TFYT---E--------------- 479 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-----------~~~~---~--------------- 479 (571)
+..++.++||||||.+++.++..+|++++++++.+++....... .... .
T Consensus 94 --~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (288)
T TIGR01250 94 --GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQE 171 (288)
T ss_pred --CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHH
Confidence 34579999999999999999999999999999877654311000 0000 0
Q ss_pred ---hhc----CCCCC------------Chhh---------------hccCCcchhhccCCCcEEEEecCCCCCCChHHHH
Q 008274 480 ---KYM----GLPSE------------DPVG---------------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTA 525 (571)
Q Consensus 480 ---~~~----g~~~~------------~~~~---------------~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~ 525 (571)
.+. ..... .... +........+.++++|+|+++|++|.. ++....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~ 250 (288)
T TIGR01250 172 AVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAR 250 (288)
T ss_pred HHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHH
Confidence 000 00000 0000 000112234567889999999999984 566666
Q ss_pred HHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 526 RLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 526 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.+.+.+ .+.++++++++||.+. .+....+.+.+.+||+
T Consensus 251 ~~~~~~----~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 251 EMQELI----AGSRLVVFPDGSHMTM-IEDPEVYFKLLSDFIR 288 (288)
T ss_pred HHHHhc----cCCeEEEeCCCCCCcc-cCCHHHHHHHHHHHhC
Confidence 665544 4568889999999874 4678889999999874
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.5e-15 Score=149.05 Aligned_cols=191 Identities=18% Similarity=0.188 Sum_probs=138.9
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+|+++|.++...+++.. ....+..++|||||+.|++.+.+. ....||+.|+++|+.++++..... .
T Consensus 176 ~~L~~~D~dG~~~~~l~~---------~~~~v~~p~wSPDG~~la~~s~~~-~~~~I~~~dl~~g~~~~l~~~~g~---~ 242 (427)
T PRK02889 176 YQLQISDADGQNAQSALS---------SPEPIISPAWSPDGTKLAYVSFES-KKPVVYVHDLATGRRRVVANFKGS---N 242 (427)
T ss_pred cEEEEECCCCCCceEecc---------CCCCcccceEcCCCCEEEEEEccC-CCcEEEEEECCCCCEEEeecCCCC---c
Confidence 478999998877676633 344567899999999999987654 345799999999998887643211 0
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
. .+.|++|+ +++.++++|..+||.++++++..++||.+......+ .|+|||++|+|.+++.+. .+|
T Consensus 243 ~---------~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~-~wSpDG~~l~f~s~~~g~--~~I 310 (427)
T PRK02889 243 S---------APAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEP-FFSPDGRSIYFTSDRGGA--PQI 310 (427)
T ss_pred c---------ceEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCe-EEcCCCCEEEEEecCCCC--cEE
Confidence 0 11355554 777778888999999999988889998865333444 499999999999887654 789
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
|.+++ ++. ..++++...+ .....+||||++++|..... ....|+++++.+++ .+.++.
T Consensus 311 y~~~~--~~g----~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~-g~~~I~v~d~~~g~-~~~lt~ 369 (427)
T PRK02889 311 YRMPA--SGG----AAQRVTFTGSYNTSPRISPDGKLLAYISRVG-GAFKLYVQDLATGQ-VTALTD 369 (427)
T ss_pred EEEEC--CCC----ceEEEecCCCCcCceEECCCCCEEEEEEccC-CcEEEEEEECCCCC-eEEccC
Confidence 99998 443 5566764332 23468999999999876543 34589999986665 456654
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.6e-16 Score=155.26 Aligned_cols=248 Identities=16% Similarity=0.147 Sum_probs=157.0
Q ss_pred ccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc--cchhhhHHHHhCCcEEEEE
Q 008274 312 KRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN--TVDMRAQYLRSKGILVWKL 389 (571)
Q Consensus 312 ~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--~~~~~~~~l~~~G~~v~~~ 389 (571)
..+++ ..|+..+++.||..|....+.+.......++.|+|+++||...+.. .|.. .....+..|+++||.|+++
T Consensus 38 ~~~gy-~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~---~w~~~~~~~sla~~La~~GydV~l~ 113 (395)
T PLN02872 38 HPAGY-SCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGD---AWFLNSPEQSLGFILADHGFDVWVG 113 (395)
T ss_pred HHcCC-CceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccccc---ceeecCcccchHHHHHhCCCCcccc
Confidence 34444 7799999999999998877654321112234578999999765543 3321 1123456788999999999
Q ss_pred CCCCCCCC-hhhhHHHHhc-----cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC---eeEE
Q 008274 390 DNRGTARR-GLKFEASIKH-----NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD---VFQC 460 (571)
Q Consensus 390 d~rG~~~~-~~~~~~~~~~-----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~---~~~~ 460 (571)
|.||++.+ +......... .+.+....|+.++++++.+.. ..++.++|||+||.+++.++ .+|+ .+++
T Consensus 114 n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~ 189 (395)
T PLN02872 114 NVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEA 189 (395)
T ss_pred cccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHH
Confidence 99997643 2111110000 111112468999999997652 36899999999999998555 4676 4666
Q ss_pred EEEcCccCCccc-------------------------c--cc-hh---hh--------------hhcCC-----------
Q 008274 461 AVSGAPVTSWDG-------------------------Y--DT-FY---TE--------------KYMGL----------- 484 (571)
Q Consensus 461 ~v~~~~~~~~~~-------------------------~--~~-~~---~~--------------~~~g~----------- 484 (571)
+++.+|+..+.. + .. .. .. ...|.
T Consensus 190 ~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~ 269 (395)
T PLN02872 190 AALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDY 269 (395)
T ss_pred HHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhH
Confidence 666666532100 0 00 00 00 00010
Q ss_pred -----CC---------------------------CChhhhccC-CcchhhccC--CCcEEEEecCCCCCCChHHHHHHHH
Q 008274 485 -----PS---------------------------EDPVGYEYS-SVMHHVHKM--KGKLLLVHGMIDENVHFRHTARLIN 529 (571)
Q Consensus 485 -----~~---------------------------~~~~~~~~~-s~~~~~~~~--~~p~lli~G~~D~~v~~~~~~~~~~ 529 (571)
|. .+...|... .|...+.++ +.|+++++|++|..+++.....+.+
T Consensus 270 ~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~ 349 (395)
T PLN02872 270 YLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLA 349 (395)
T ss_pred HHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHH
Confidence 00 011223222 234457777 4699999999999999999888888
Q ss_pred HHHHcCCCeeEEEcCCCCCC--CCCCCcHHHHHHHHHHHHHHh
Q 008274 530 ALVAARKPYEILIFPDERHM--PRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~H~--~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+. ...++..+++.+|. +...+.++.+++.+++||+++
T Consensus 350 ~Lp---~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 350 ELP---SKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred HCC---CccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 773 23578889999996 445677888999999999875
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=153.97 Aligned_cols=224 Identities=12% Similarity=0.109 Sum_probs=141.1
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH---hCCcEEEEECCCCCCCChh
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR---SKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~rG~~~~~~ 399 (571)
.+....+.++++....|.+. ...|.||++||.+++.. .|.. .....|+ +++|.|+++|+||+|.+..
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~----~~k~~VVLlHG~~~s~~---~W~~---~~~~~L~~~~~~~yrVia~Dl~G~G~S~~ 248 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDN----KAKEDVLFIHGFISSSA---FWTE---TLFPNFSDAAKSTYRLFAVDLLGFGRSPK 248 (481)
T ss_pred eeEeeCCeEEEEEEecCCCC----CCCCeEEEECCCCccHH---HHHH---HHHHHHHHHhhCCCEEEEECCCCCCCCcC
Confidence 33444557888888888653 23367889999876643 2321 1123333 4799999999999987753
Q ss_pred hhHHHHhccCCCCCchhHHHHH-HHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-----
Q 008274 400 KFEASIKHNCGRIDAEDQLTGA-EWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY----- 473 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~----- 473 (571)
... ....+++..+.+ ..+.+.. +.+++.++||||||.+++.++.++|++++++++.++.......
T Consensus 249 p~~-------~~ytl~~~a~~l~~~ll~~l--g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~ 319 (481)
T PLN03087 249 PAD-------SLYTLREHLEMIERSVLERY--KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQAT 319 (481)
T ss_pred CCC-------CcCCHHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHH
Confidence 210 112244544444 2444432 4568999999999999999999999999999988754311000
Q ss_pred ---------cch------------hhh---hhc-----------------CCCCCChhhhc----cC--Cc---------
Q 008274 474 ---------DTF------------YTE---KYM-----------------GLPSEDPVGYE----YS--SV--------- 497 (571)
Q Consensus 474 ---------~~~------------~~~---~~~-----------------g~~~~~~~~~~----~~--s~--------- 497 (571)
... |.+ +.. -.+......+. .. .+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i 399 (481)
T PLN03087 320 QYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNII 399 (481)
T ss_pred HHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHH
Confidence 000 000 000 00000000000 00 00
Q ss_pred ----------c-hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHH
Q 008274 498 ----------M-HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEF 566 (571)
Q Consensus 498 ----------~-~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 566 (571)
+ ....++++|+|+++|++|..+|++.++.+.+.+ .+.+++++|++||.....+....+.+.+.+|
T Consensus 400 ~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i----P~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F 475 (481)
T PLN03087 400 CGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV----PRARVKVIDDKDHITIVVGRQKEFARELEEI 475 (481)
T ss_pred hchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC----CCCEEEEeCCCCCcchhhcCHHHHHHHHHHH
Confidence 0 011268899999999999999999988887765 5679999999999864446678888888888
Q ss_pred HHH
Q 008274 567 IER 569 (571)
Q Consensus 567 l~~ 569 (571)
...
T Consensus 476 ~~~ 478 (481)
T PLN03087 476 WRR 478 (481)
T ss_pred hhc
Confidence 753
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.1e-16 Score=142.35 Aligned_cols=189 Identities=17% Similarity=0.106 Sum_probs=111.5
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhH-HHHhCCcEEEEECCCCC------CCChhhhHHHHhccC-CCCCchhHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQ-YLRSKGILVWKLDNRGT------ARRGLKFEASIKHNC-GRIDAEDQL 418 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~-~l~~~G~~v~~~d~rG~------~~~~~~~~~~~~~~~-~~~~~~D~~ 418 (571)
++.|+||++||.+.+.. .| ..... .+......++.++-+-. |.....|........ ...+.+++.
T Consensus 12 ~~~~lvi~LHG~G~~~~---~~----~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSED---LF----ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp T-SEEEEEE--TTS-HH---HH----HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred CCceEEEEECCCCCCcc---hh----HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 57799999999655431 21 11122 22346788888875421 111112211100000 001122232
Q ss_pred -------HHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhh
Q 008274 419 -------TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVG 491 (571)
Q Consensus 419 -------~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 491 (571)
+.++...+ ..++.+||++.|.|+||.+++.++.++|..++++++.+|...... ..
T Consensus 85 ~s~~~l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~--------------~~--- 146 (216)
T PF02230_consen 85 ESAERLDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES--------------EL--- 146 (216)
T ss_dssp HHHHHHHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC--------------CC---
T ss_pred HHHHHHHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc--------------cc---
Confidence 22333333 348999999999999999999999999999999999987643210 00
Q ss_pred hccCCcchhhccC-CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 492 YEYSSVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 492 ~~~~s~~~~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
....... ++|++++||..|+++|.+.++...+.|++.+.++++..|++.||.+ ..+..+.+.+||+++
T Consensus 147 ------~~~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i-----~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 147 ------EDRPEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI-----SPEELRDLREFLEKH 215 (216)
T ss_dssp ------HCCHCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-------HHHHHHHHHHHHHH
T ss_pred ------cccccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC-----CHHHHHHHHHHHhhh
Confidence 0001111 6799999999999999999999999999999999999999999998 345678899999987
Q ss_pred C
Q 008274 571 L 571 (571)
Q Consensus 571 l 571 (571)
+
T Consensus 216 ~ 216 (216)
T PF02230_consen 216 I 216 (216)
T ss_dssp -
T ss_pred C
Confidence 5
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.8e-15 Score=140.78 Aligned_cols=225 Identities=16% Similarity=0.113 Sum_probs=155.2
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHH-HhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYL-RSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
....+..++|.|.... ..++.|+|||+|||++... ......++.+...+ .+.+..|+++|||-....
T Consensus 70 ~~~~l~vRly~P~~~~-~~~~~p~lvyfHGGGf~~~--S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh--------- 137 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSS-SETKLPVLVYFHGGGFCLG--SANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH--------- 137 (336)
T ss_pred CCCCeEEEEEcCCCCC-cccCceEEEEEeCCccEeC--CCCCchhHHHHHHHHHHcCeEEEecCcccCCCC---------
Confidence 3445899999998752 2268899999999987643 22233455556666 579999999999954321
Q ss_pred ccCCCCCchhHHHHHHHHHHc----CCCcCCcEEEEeechHHHHHHHHHhcC------CCeeEEEEEcCccCCccccc--
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQ----GLAKVGHIGLYGWSYGGYLSAITLARF------PDVFQCAVSGAPVTSWDGYD-- 474 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~----~~~d~~~i~l~G~S~GG~~a~~~~~~~------~~~~~~~v~~~~~~~~~~~~-- 474 (571)
.-...++|..++++|+.++ ..+|.+||+|+|-|.||.+|..++.+. +..+++.|++.|+..-....
T Consensus 138 --~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~ 215 (336)
T KOG1515|consen 138 --PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTES 215 (336)
T ss_pred --CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCH
Confidence 1223489999999999885 568999999999999999998877542 35679999999987532111
Q ss_pred ------------------chhhhhhcCCCCCChhhhccCCcch-----hhccCC-CcEEEEecCCCCCCChHHHHHHHHH
Q 008274 475 ------------------TFYTEKYMGLPSEDPVGYEYSSVMH-----HVHKMK-GKLLLVHGMIDENVHFRHTARLINA 530 (571)
Q Consensus 475 ------------------~~~~~~~~g~~~~~~~~~~~~s~~~-----~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~ 530 (571)
.+|. .++..-..+.+ -...+|.. ...... +|+|++.++.|... .++..++++
T Consensus 216 e~~~~~~~~~~~~~~~~~~~w~-~~lP~~~~~~~-~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~ 291 (336)
T KOG1515|consen 216 EKQQNLNGSPELARPKIDKWWR-LLLPNGKTDLD-HPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEK 291 (336)
T ss_pred HHHHhhcCCcchhHHHHHHHHH-HhCCCCCCCcC-CccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHH
Confidence 1111 11111000010 01112222 111222 47999999999886 588999999
Q ss_pred HHHcCCCeeEEEcCCCCCCCC--CC--CcHHHHHHHHHHHHHHh
Q 008274 531 LVAARKPYEILIFPDERHMPR--RH--RDRIYMEERIWEFIERT 570 (571)
Q Consensus 531 l~~~~~~~~~~~~~~~~H~~~--~~--~~~~~~~~~i~~fl~~~ 570 (571)
|++.|++++++.++++.|++. .+ .......+++.+|+++.
T Consensus 292 Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 292 LKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 999999999999999999862 22 35677889999999875
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.7e-16 Score=154.03 Aligned_cols=202 Identities=12% Similarity=0.075 Sum_probs=126.9
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|...+..|++ +|.|+++|+||+|.+..... .....++..+.+..+.+.-
T Consensus 89 p~lvllHG~~~~~~-------~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~~l~~~l~~l- 152 (360)
T PLN02679 89 PPVLLVHGFGASIP-------HWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-------FSYTMETWAELILDFLEEV- 152 (360)
T ss_pred CeEEEECCCCCCHH-------HHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-------ccccHHHHHHHHHHHHHHh-
Confidence 67889999776533 34445666655 89999999999997753110 0112333333333333221
Q ss_pred CcCCcEEEEeechHHHHHHHHHh-cCCCeeEEEEEcCccCCc---------cc---------cc-----c-----hhh--
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLA-RFPDVFQCAVSGAPVTSW---------DG---------YD-----T-----FYT-- 478 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~-~~~~~~~~~v~~~~~~~~---------~~---------~~-----~-----~~~-- 478 (571)
..+++.|+|||+||.+++.+++ .+|++++++|+.++.... .. +. . .+.
T Consensus 153 -~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (360)
T PLN02679 153 -VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRV 231 (360)
T ss_pred -cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHh
Confidence 3468999999999999988887 479999999987754211 00 00 0 000
Q ss_pred --hh----h----cCCCCC-C----------------hhhhc-------cCCcchhhccCCCcEEEEecCCCCCCChHHH
Q 008274 479 --EK----Y----MGLPSE-D----------------PVGYE-------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHT 524 (571)
Q Consensus 479 --~~----~----~g~~~~-~----------------~~~~~-------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~ 524 (571)
.. . ...+.. . ...+. ..+....+.++++|+|+++|++|..+|+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~ 311 (360)
T PLN02679 232 KQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGP 311 (360)
T ss_pred cCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhh
Confidence 00 0 000000 0 00000 0111234667889999999999999998743
Q ss_pred -HHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 525 -ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 525 -~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.++.+.+.+.-.+.+++++|++||.+ ..+..+.+.+.+.+||++
T Consensus 312 ~~~~~~~l~~~ip~~~l~~i~~aGH~~-~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 312 VGKYFSSLPSQLPNVTLYVLEGVGHCP-HDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred HHHHHHhhhccCCceEEEEcCCCCCCc-cccCHHHHHHHHHHHHHh
Confidence 23444555444678999999999987 567789999999999976
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.4e-16 Score=138.93 Aligned_cols=193 Identities=13% Similarity=0.125 Sum_probs=122.7
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC--CChhhhHHHHhccC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA--RRGLKFEASIKHNC 409 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~--~~~~~~~~~~~~~~ 409 (571)
|.+.+|.|+.. ..++.|+||++||..++.. .|... ..+.+...++||+|+.|+..... .....|.. .....
T Consensus 1 l~Y~lYvP~~~--~~~~~PLVv~LHG~~~~a~---~~~~~-s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~ 73 (220)
T PF10503_consen 1 LSYRLYVPPGA--PRGPVPLVVVLHGCGQSAE---DFAAG-SGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQR 73 (220)
T ss_pred CcEEEecCCCC--CCCCCCEEEEeCCCCCCHH---HHHhh-cCHHHHhhcCCeEEEcccccccCCCCCcccccc-ccccc
Confidence 45789999864 2247899999999766543 22211 12234444789999999864322 22222222 22233
Q ss_pred CCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc--chhhhhhcCCCCC
Q 008274 410 GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD--TFYTEKYMGLPSE 487 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~g~~~~ 487 (571)
+..+...+.+.++++..+..+|++||.+.|+|.||.|+..+++.+|++|+++..++++.--.... ........+.. .
T Consensus 74 g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~-~ 152 (220)
T PF10503_consen 74 GGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPR-P 152 (220)
T ss_pred CccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCC-C
Confidence 44456677888999999988999999999999999999999999999999988887764211000 00100000111 1
Q ss_pred ChhhhccCCcchhhccC-CCcEEEEecCCCCCCChHHHHHHHHHHHHc
Q 008274 488 DPVGYEYSSVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAA 534 (571)
Q Consensus 488 ~~~~~~~~s~~~~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~ 534 (571)
.+..... ........ ..|++++||+.|..|.+.++.++.+.+...
T Consensus 153 ~p~~~~~--a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 153 APAAAWG--ARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred ChHHHHH--hhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 1111100 00001011 249999999999999999999999887654
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.4e-16 Score=139.73 Aligned_cols=217 Identities=21% Similarity=0.185 Sum_probs=152.0
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.-.++|+..+|.+|.+|+..|...+ ++.|+||..||-.+... .|.. .-.++..||+|+.+|.||.|++.
T Consensus 56 ~ydvTf~g~~g~rI~gwlvlP~~~~---~~~P~vV~fhGY~g~~g---~~~~-----~l~wa~~Gyavf~MdvRGQg~~~ 124 (321)
T COG3458 56 VYDVTFTGYGGARIKGWLVLPRHEK---GKLPAVVQFHGYGGRGG---EWHD-----MLHWAVAGYAVFVMDVRGQGSSS 124 (321)
T ss_pred EEEEEEeccCCceEEEEEEeecccC---CccceEEEEeeccCCCC---Cccc-----cccccccceeEEEEecccCCCcc
Confidence 3457888899999999999998642 68899999999655532 2211 23567889999999999988763
Q ss_pred hhhH----H-H--HhccCCC----------CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEE
Q 008274 399 LKFE----A-S--IKHNCGR----------IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 461 (571)
Q Consensus 399 ~~~~----~-~--~~~~~~~----------~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~ 461 (571)
.+-. . . ...-.|. ..+.|+..+++.+.+...+|.+||++.|.|.||.+++.+++. ..+++++
T Consensus 125 ~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal-~~rik~~ 203 (321)
T COG3458 125 QDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL-DPRIKAV 203 (321)
T ss_pred ccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhc-Chhhhcc
Confidence 2110 0 0 0000111 136789999999999999999999999999999999988885 4577999
Q ss_pred EEcCccCCc-ccc-----cchhhh--hhcCC--CCCC--hhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHH
Q 008274 462 VSGAPVTSW-DGY-----DTFYTE--KYMGL--PSED--PVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLIN 529 (571)
Q Consensus 462 v~~~~~~~~-~~~-----~~~~~~--~~~g~--~~~~--~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~ 529 (571)
++..|+..- ... ...|.+ +|+.. +.+. .+...-.+..+.+.+++.|+|+..|--|++||+.....+++
T Consensus 204 ~~~~Pfl~df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN 283 (321)
T COG3458 204 VADYPFLSDFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYN 283 (321)
T ss_pred cccccccccchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhh
Confidence 998887542 110 011111 12211 1110 01222235556788999999999999999999998888888
Q ss_pred HHHHcCCCeeEEEcCCCCCCC
Q 008274 530 ALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~H~~ 550 (571)
++ -.+.++.+||.-+|.-
T Consensus 284 ~l---~~~K~i~iy~~~aHe~ 301 (321)
T COG3458 284 AL---TTSKTIEIYPYFAHEG 301 (321)
T ss_pred cc---cCCceEEEeecccccc
Confidence 87 4556778888888964
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.5e-16 Score=146.19 Aligned_cols=192 Identities=18% Similarity=0.176 Sum_probs=125.1
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+++.. .|......|.+ .|.|+++|+||+|.+... .....+++. +.+.+.
T Consensus 14 ~~ivllHG~~~~~~-------~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~---------~~~~~~~~~---~~l~~~-- 71 (256)
T PRK10349 14 VHLVLLHGWGLNAE-------VWRCIDEELSS-HFTLHLVDLPGFGRSRGF---------GALSLADMA---EAVLQQ-- 71 (256)
T ss_pred CeEEEECCCCCChh-------HHHHHHHHHhc-CCEEEEecCCCCCCCCCC---------CCCCHHHHH---HHHHhc--
Confidence 56899999766543 34445667755 599999999999876421 111233333 333332
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc------ccccc---------------hhhhhhc-----C
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW------DGYDT---------------FYTEKYM-----G 483 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~------~~~~~---------------~~~~~~~-----g 483 (571)
..+++.++|||+||.+++.++.++|++++++++.++.... ..... .....++ +
T Consensus 72 -~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T PRK10349 72 -APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMG 150 (256)
T ss_pred -CCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHcc
Confidence 3468999999999999999999999999999887653211 00000 0000110 1
Q ss_pred CCCCC-----------------h-------hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCee
Q 008274 484 LPSED-----------------P-------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539 (571)
Q Consensus 484 ~~~~~-----------------~-------~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 539 (571)
..... . ..+...+....+.++++|+|+++|+.|..+|.+.+..+.+.+ .+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i----~~~~ 226 (256)
T PRK10349 151 TETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW----PHSE 226 (256)
T ss_pred CchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC----CCCe
Confidence 10000 0 001112223346678899999999999999988776665544 5779
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++++|++||.+ ..++...+.+.+.+|-++
T Consensus 227 ~~~i~~~gH~~-~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 227 SYIFAKAAHAP-FISHPAEFCHLLVALKQR 255 (256)
T ss_pred EEEeCCCCCCc-cccCHHHHHHHHHHHhcc
Confidence 99999999987 457888888888887543
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-15 Score=139.80 Aligned_cols=234 Identities=15% Similarity=0.156 Sum_probs=152.8
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
...+...+..+||..+...+..++.. .+.|+||.+||-.++.. +...+.++..+.++||.|+++|.||+++
T Consensus 47 ~~~~re~v~~pdg~~~~ldw~~~p~~----~~~P~vVl~HGL~G~s~-----s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~ 117 (345)
T COG0429 47 VAYTRERLETPDGGFIDLDWSEDPRA----AKKPLVVLFHGLEGSSN-----SPYARGLMRALSRRGWLVVVFHFRGCSG 117 (345)
T ss_pred cccceEEEEcCCCCEEEEeeccCccc----cCCceEEEEeccCCCCc-----CHHHHHHHHHHHhcCCeEEEEecccccC
Confidence 34455577777887666666664332 56699999999666543 2234556778889999999999999987
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC--eeEEEEE-cCccCCc---
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD--VFQCAVS-GAPVTSW--- 470 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~--~~~~~v~-~~~~~~~--- 470 (571)
.... ...-+.....+|+..+++++.++. -..++..+|.|+||.+.+..+.+..+ ...|+++ .+|+ |+
T Consensus 118 ~~n~----~p~~yh~G~t~D~~~~l~~l~~~~--~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~-Dl~~~ 190 (345)
T COG0429 118 EANT----SPRLYHSGETEDIRFFLDWLKARF--PPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF-DLEAC 190 (345)
T ss_pred Cccc----CcceecccchhHHHHHHHHHHHhC--CCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH-HHHHH
Confidence 6431 222223344699999999999865 36789999999999555555544322 2344444 4442 21
Q ss_pred --------c--cccchh---hhh--------h-----------------------------cCCCCCChhhhccCCcchh
Q 008274 471 --------D--GYDTFY---TEK--------Y-----------------------------MGLPSEDPVGYEYSSVMHH 500 (571)
Q Consensus 471 --------~--~~~~~~---~~~--------~-----------------------------~g~~~~~~~~~~~~s~~~~ 500 (571)
. .|...+ .++ + .|.+ +..+.|...|.+..
T Consensus 191 ~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~-da~dYYr~aSs~~~ 269 (345)
T COG0429 191 AYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFA-DAEDYYRQASSLPL 269 (345)
T ss_pred HHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCC-cHHHHHHhcccccc
Confidence 1 010000 000 0 0110 12356788899999
Q ss_pred hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC-C-C-CCCc-HHHHHHHHHHHHHHh
Q 008274 501 VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM-P-R-RHRD-RIYMEERIWEFIERT 570 (571)
Q Consensus 501 ~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~-~-~-~~~~-~~~~~~~i~~fl~~~ 570 (571)
+.+|++|+||||+.+|++++++.-...-.. .+..+.+.+.+-+||. + . ...+ .....+++.+||+..
T Consensus 270 L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~---~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 270 LPKIRKPTLIINAKDDPFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred ccccccceEEEecCCCCCCChhhCCcchhc---CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 999999999999999999987543333222 4688999999999995 3 2 1212 236778899999865
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.7e-14 Score=146.74 Aligned_cols=191 Identities=18% Similarity=0.165 Sum_probs=140.3
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+|+++|.+++..+.+.. ....+..+.|||||+.|++++.+. ...+||++|+++|+.++|+..... .
T Consensus 179 ~~l~~~d~~g~~~~~l~~---------~~~~~~~p~wSpDG~~la~~s~~~-~~~~l~~~~l~~g~~~~l~~~~g~---~ 245 (430)
T PRK00178 179 YTLQRSDYDGARAVTLLQ---------SREPILSPRWSPDGKRIAYVSFEQ-KRPRIFVQNLDTGRREQITNFEGL---N 245 (430)
T ss_pred eEEEEECCCCCCceEEec---------CCCceeeeeECCCCCEEEEEEcCC-CCCEEEEEECCCCCEEEccCCCCC---c
Confidence 478999999988777743 344667899999999999887664 345799999999998887643211 0
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
. . +.|++|+ ++|...++|..+||++++++++.++||........+ .|+|||+.|+|.+++.+. .+|
T Consensus 246 ~----~-----~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~-~~spDg~~i~f~s~~~g~--~~i 313 (430)
T PRK00178 246 G----A-----PAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEP-FWGKDGRTLYFTSDRGGK--PQI 313 (430)
T ss_pred C----C-----eEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCe-EECCCCCEEEEEECCCCC--ceE
Confidence 0 1 1345554 777777788899999999999999999765444444 499999999999987764 789
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
|.+++ .+. ..++++.... ...+.+||||++++|..... ....|+++++.+++ .+.|+.
T Consensus 314 y~~d~--~~g----~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~-~~~~l~~~dl~tg~-~~~lt~ 372 (430)
T PRK00178 314 YKVNV--NGG----RAERVTFVGNYNARPRLSADGKTLVMVHRQD-GNFHVAAQDLQRGS-VRILTD 372 (430)
T ss_pred EEEEC--CCC----CEEEeecCCCCccceEECCCCCEEEEEEccC-CceEEEEEECCCCC-EEEccC
Confidence 99998 443 5567765332 23458999999999986543 34579999986665 466654
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.5e-14 Score=146.17 Aligned_cols=184 Identities=18% Similarity=0.206 Sum_probs=133.6
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+|+++|.++...+.++ .....+..|.|||||+.+++.+.+. ....|++.|+++|+.+.++..... .
T Consensus 184 ~~i~i~d~dg~~~~~lt---------~~~~~v~~p~wSPDG~~la~~s~~~-~~~~i~i~dl~tg~~~~l~~~~g~---~ 250 (429)
T PRK01742 184 YEVRVADYDGFNQFIVN---------RSSQPLMSPAWSPDGSKLAYVSFEN-KKSQLVVHDLRSGARKVVASFRGH---N 250 (429)
T ss_pred EEEEEECCCCCCceEec---------cCCCccccceEcCCCCEEEEEEecC-CCcEEEEEeCCCCceEEEecCCCc---c
Confidence 47899999988766653 2345677899999999999887654 345799999999988777543211 0
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
. .+.|++|+ +++.+.++|..+||++++++++.++||.+...+..+ .|+|||+.|+|.+++.+. .+|
T Consensus 251 ~---------~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~-~wSpDG~~i~f~s~~~g~--~~I 318 (429)
T PRK01742 251 G---------APAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEP-SWSPDGQSILFTSDRSGS--PQV 318 (429)
T ss_pred C---------ceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCE-EECCCCCEEEEEECCCCC--ceE
Confidence 0 11455665 666667788889999999999999999876555555 499999999999987764 799
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
|.++. .+. ..++++.. + ....+||||+++++... ..++++++.+++. +.++
T Consensus 319 ~~~~~--~~~----~~~~l~~~-~-~~~~~SpDG~~ia~~~~-----~~i~~~Dl~~g~~-~~lt 369 (429)
T PRK01742 319 YRMSA--SGG----GASLVGGR-G-YSAQISADGKTLVMING-----DNVVKQDLTSGST-EVLS 369 (429)
T ss_pred EEEEC--CCC----CeEEecCC-C-CCccCCCCCCEEEEEcC-----CCEEEEECCCCCe-EEec
Confidence 99987 443 34455432 3 44689999999988754 3578888866653 3443
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-14 Score=146.23 Aligned_cols=192 Identities=19% Similarity=0.178 Sum_probs=139.7
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
...|+++|.+++..++++. ....+..+.|||||+.|++.+.+. ...+||++|+++|+.++|+.....
T Consensus 183 ~~~l~i~D~~g~~~~~lt~---------~~~~v~~p~wSpDg~~la~~s~~~-~~~~l~~~dl~~g~~~~l~~~~g~--- 249 (433)
T PRK04922 183 RYALQVADSDGYNPQTILR---------SAEPILSPAWSPDGKKLAYVSFER-GRSAIYVQDLATGQRELVASFRGI--- 249 (433)
T ss_pred eEEEEEECCCCCCceEeec---------CCCccccccCCCCCCEEEEEecCC-CCcEEEEEECCCCCEEEeccCCCC---
Confidence 3579999999888777743 344567899999999999887554 356799999999998887643211
Q ss_pred eccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 159 NLHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
.. .+.|++|+ +++...++|..+||++++++++.++||........+ .|+|||++|+|.+++.+. .+
T Consensus 250 ~~---------~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~-~~spDG~~l~f~sd~~g~--~~ 317 (433)
T PRK04922 250 NG---------APSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEP-TWAPDGKSIYFTSDRGGR--PQ 317 (433)
T ss_pred cc---------CceECCCCCEEEEEEeCCCCceEEEEECCCCCeEECccCCCCccce-EECCCCCEEEEEECCCCC--ce
Confidence 10 11345554 777777788889999999999999998764333344 599999999999987764 78
Q ss_pred EEEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
||.+++ ++. ..++++.... ...+.+||||++++|.... .....|+++++.+++ .+.|+.
T Consensus 318 iy~~dl--~~g----~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~-~~~~~I~v~d~~~g~-~~~Lt~ 377 (433)
T PRK04922 318 IYRVAA--SGG----SAERLTFQGNYNARASVSPDGKKIAMVHGS-GGQYRIAVMDLSTGS-VRTLTP 377 (433)
T ss_pred EEEEEC--CCC----CeEEeecCCCCccCEEECCCCCEEEEEECC-CCceeEEEEECCCCC-eEECCC
Confidence 999998 443 5667765432 2346999999999997653 333489999986655 456654
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.67 E-value=1e-15 Score=144.61 Aligned_cols=190 Identities=18% Similarity=0.189 Sum_probs=124.5
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|...+..|+ .+|.|+++|+||+|.+... . ..++...++.+.+..
T Consensus 5 ~~iv~~HG~~~~~~-------~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~---------~---~~~~~~~~~~~~~~~- 63 (245)
T TIGR01738 5 VHLVLIHGWGMNAE-------VFRCLDEELS-AHFTLHLVDLPGHGRSRGF---------G---PLSLADAAEAIAAQA- 63 (245)
T ss_pred ceEEEEcCCCCchh-------hHHHHHHhhc-cCeEEEEecCCcCccCCCC---------C---CcCHHHHHHHHHHhC-
Confidence 67899999766533 2444566665 4799999999999876421 1 123344444444432
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc---cc--------ch----h-------hhhh-----c
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG---YD--------TF----Y-------TEKY-----M 482 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~---~~--------~~----~-------~~~~-----~ 482 (571)
.+++.++|||+||.+++.++.++|++++++|+.++...+.. +. .. . ...+ +
T Consensus 64 --~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (245)
T TIGR01738 64 --PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTL 141 (245)
T ss_pred --CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 26899999999999999999999999999887765432110 00 00 0 0000 1
Q ss_pred CCCCCChh------------------------hhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCe
Q 008274 483 GLPSEDPV------------------------GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPY 538 (571)
Q Consensus 483 g~~~~~~~------------------------~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~ 538 (571)
+....... .+...+....+.++++|+|+++|++|..++++....+.+.+ .++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~----~~~ 217 (245)
T TIGR01738 142 GTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA----PHS 217 (245)
T ss_pred cCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC----CCC
Confidence 11110000 00111122345788999999999999999998877776654 467
Q ss_pred eEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 539 EILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 539 ~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
++++++++||.+ ..++...+.+.+.+|+
T Consensus 218 ~~~~~~~~gH~~-~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 218 ELYIFAKAAHAP-FLSHAEAFCALLVAFK 245 (245)
T ss_pred eEEEeCCCCCCc-cccCHHHHHHHHHhhC
Confidence 899999999987 4467888888888885
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.1e-15 Score=147.44 Aligned_cols=219 Identities=16% Similarity=0.143 Sum_probs=133.0
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh
Q 008274 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF 401 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~ 401 (571)
-.+...+|..+++..+.++ +.+.||++||++++.. . ......+...+|.|+++|+||+|.+....
T Consensus 7 ~~~~~~~~~~l~y~~~g~~-------~~~~lvllHG~~~~~~---~-----~~~~~~~~~~~~~vi~~D~~G~G~S~~~~ 71 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNP-------DGKPVVFLHGGPGSGT---D-----PGCRRFFDPETYRIVLFDQRGCGKSTPHA 71 (306)
T ss_pred CeEEcCCCcEEEEEECcCC-------CCCEEEEECCCCCCCC---C-----HHHHhccCccCCEEEEECCCCCCCCCCCC
Confidence 3555667777776554221 1245688999877532 1 11233455679999999999998765211
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc----------
Q 008274 402 EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD---------- 471 (571)
Q Consensus 402 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~---------- 471 (571)
. .......|+.+.+..+.+.- +.+++.++||||||.+++.++.++|++++++|+.++.....
T Consensus 72 ~------~~~~~~~~~~~dl~~l~~~l--~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 143 (306)
T TIGR01249 72 C------LEENTTWDLVADIEKLREKL--GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGG 143 (306)
T ss_pred C------cccCCHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcc
Confidence 0 01122455666666665542 34679999999999999999999999988888766532100
Q ss_pred ---cccchhh--------------------hhhcCCCC-------------C----------------Chh---hhcc--
Q 008274 472 ---GYDTFYT--------------------EKYMGLPS-------------E----------------DPV---GYEY-- 494 (571)
Q Consensus 472 ---~~~~~~~--------------------~~~~g~~~-------------~----------------~~~---~~~~-- 494 (571)
.+...+. ..+..... . ++. .+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (306)
T TIGR01249 144 ASMIYPDAWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLE 223 (306)
T ss_pred hhhhCHHHHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHH
Confidence 0000000 00000000 0 000 0000
Q ss_pred ---------C----CcchhhccC-CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHH
Q 008274 495 ---------S----SVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYME 560 (571)
Q Consensus 495 ---------~----s~~~~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 560 (571)
. +....+.++ ++|+|++||+.|..+|+..+..+++.+ .+.++++++++||....++ ..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~----~~ 295 (306)
T TIGR01249 224 NHYFVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF----PEAELKVTNNAGHSAFDPN----NL 295 (306)
T ss_pred HhHHHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC----CCCEEEEECCCCCCCCChH----HH
Confidence 0 011234556 489999999999999999988888765 3578889999999874333 44
Q ss_pred HHHHHHHHHhC
Q 008274 561 ERIWEFIERTL 571 (571)
Q Consensus 561 ~~i~~fl~~~l 571 (571)
+.+.+|++..|
T Consensus 296 ~~i~~~~~~~~ 306 (306)
T TIGR01249 296 AALVHALETYL 306 (306)
T ss_pred HHHHHHHHHhC
Confidence 66777776654
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-15 Score=143.99 Aligned_cols=197 Identities=15% Similarity=0.169 Sum_probs=124.5
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHH-HHHHHHcC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTG-AEWLIKQG 428 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~ 428 (571)
|+||++||.+++.. .|......|+ +||.|+++|+||+|.+.... .......+++.+. +..+.+.-
T Consensus 2 ~~vv~~hG~~~~~~-------~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~------~~~~~~~~~~~~~~~~~~~~~~ 67 (251)
T TIGR03695 2 PVLVFLHGFLGSGA-------DWQALIELLG-PHFRCLAIDLPGHGSSQSPD------EIERYDFEEAAQDILATLLDQL 67 (251)
T ss_pred CEEEEEcCCCCchh-------hHHHHHHHhc-ccCeEEEEcCCCCCCCCCCC------ccChhhHHHHHHHHHHHHHHHc
Confidence 67899999766543 3455677777 89999999999998774321 1111223444443 44444432
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc---------------------hhhhhhcC----
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT---------------------FYTEKYMG---- 483 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~---------------------~~~~~~~g---- 483 (571)
+.+++.++|||+||.+++.++.++|+.++++++.++...+..... .+...+..
T Consensus 68 --~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (251)
T TIGR03695 68 --GIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLF 145 (251)
T ss_pred --CCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCcee
Confidence 557899999999999999999999999999998876543211000 00000000
Q ss_pred -----CCCCChhhh----------------------ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCC
Q 008274 484 -----LPSEDPVGY----------------------EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARK 536 (571)
Q Consensus 484 -----~~~~~~~~~----------------------~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~ 536 (571)
.+......+ ...+....+.++++|+|+++|++|..++ ... +.+.+...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~----~~~~~~~~ 220 (251)
T TIGR03695 146 ASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIA----KEMQKLLP 220 (251)
T ss_pred eecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHH----HHHHhcCC
Confidence 000000000 0012223356788999999999998653 322 33444456
Q ss_pred CeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 537 PYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 537 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+.+++.+|++||.+. .++.+.+.+.+.+||+
T Consensus 221 ~~~~~~~~~~gH~~~-~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 221 NLTLVIIANAGHNIH-LENPEAFAKILLAFLE 251 (251)
T ss_pred CCcEEEEcCCCCCcC-ccChHHHHHHHHHHhC
Confidence 789999999999873 4567788888888873
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-15 Score=148.72 Aligned_cols=208 Identities=16% Similarity=0.225 Sum_probs=126.3
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHH-------HhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHH
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYL-------RSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGA 421 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l-------~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 421 (571)
.|.||++||.+++.. .|.. ..+...| ..++|.|+++|+||+|.+..... ..........++++.+.+
T Consensus 69 gpplvllHG~~~~~~---~~~~--~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~-~~~~~~~~~~~~~~a~~~ 142 (360)
T PRK06489 69 DNAVLVLHGTGGSGK---SFLS--PTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSD-GLRAAFPRYDYDDMVEAQ 142 (360)
T ss_pred CCeEEEeCCCCCchh---hhcc--chhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCc-CCCCCCCcccHHHHHHHH
Confidence 477899999877643 2210 0122222 25789999999999987742110 000001123345555433
Q ss_pred HH-HHHcCCCcCCcEE-EEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc-c----ccc---------------hhh-
Q 008274 422 EW-LIKQGLAKVGHIG-LYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD-G----YDT---------------FYT- 478 (571)
Q Consensus 422 ~~-l~~~~~~d~~~i~-l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~-~----~~~---------------~~~- 478 (571)
.. +.++- +.+++. |+||||||.+++.++.++|++++++|+.++..... . ... .+.
T Consensus 143 ~~~l~~~l--gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (360)
T PRK06489 143 YRLVTEGL--GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTT 220 (360)
T ss_pred HHHHHHhc--CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 33 33432 335664 89999999999999999999999999876532100 0 000 000
Q ss_pred -----h----hh-----------c-CCCC-C----------------Chhhh-------ccCCcchhhccCCCcEEEEec
Q 008274 479 -----E----KY-----------M-GLPS-E----------------DPVGY-------EYSSVMHHVHKMKGKLLLVHG 513 (571)
Q Consensus 479 -----~----~~-----------~-g~~~-~----------------~~~~~-------~~~s~~~~~~~~~~p~lli~G 513 (571)
. .+ . ..+. . ....+ ...+....+.+|++|+|+++|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G 300 (360)
T PRK06489 221 QPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINS 300 (360)
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEec
Confidence 0 00 0 0000 0 00001 011223346778999999999
Q ss_pred CCCCCCChHHH--HHHHHHHHHcCCCeeEEEcCCC----CCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 514 MIDENVHFRHT--ARLINALVAARKPYEILIFPDE----RHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 514 ~~D~~v~~~~~--~~~~~~l~~~~~~~~~~~~~~~----~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++|..+|++.+ +.+.+.+ .+.+++++|++ ||.+ . ++...+.+.+.+||+++
T Consensus 301 ~~D~~~p~~~~~~~~la~~i----p~a~l~~i~~a~~~~GH~~-~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 301 ADDERNPPETGVMEAALKRV----KHGRLVLIPASPETRGHGT-T-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred CCCcccChhhHHHHHHHHhC----cCCeEEEECCCCCCCCccc-c-cCHHHHHHHHHHHHHhc
Confidence 99999998865 5565544 45789999996 9987 4 68899999999999864
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.5e-15 Score=151.45 Aligned_cols=206 Identities=17% Similarity=0.121 Sum_probs=123.9
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|.||++||.+++.. . |...+..|++ +|.|+++|+||+|.+..... ..... ....+.+.+.+..+.+.
T Consensus 104 ~~p~vvllHG~~~~~~---~----~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~--~~~~~-~~~~~~~~~~i~~~~~~ 172 (402)
T PLN02894 104 DAPTLVMVHGYGASQG---F----FFRNFDALAS-RFRVIAIDQLGWGGSSRPDF--TCKST-EETEAWFIDSFEEWRKA 172 (402)
T ss_pred CCCEEEEECCCCcchh---H----HHHHHHHHHh-CCEEEEECCCCCCCCCCCCc--ccccH-HHHHHHHHHHHHHHHHH
Confidence 4588999999766532 2 2233556655 69999999999988753210 00000 00011122222222222
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc----------c-h--------------------
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD----------T-F-------------------- 476 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~----------~-~-------------------- 476 (571)
.+..++.++||||||++++.++.++|++++++|+.+|..-..... . +
T Consensus 173 --l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 250 (402)
T PLN02894 173 --KNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIR 250 (402)
T ss_pred --cCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHH
Confidence 245689999999999999999999999999988887643110000 0 0
Q ss_pred ------------hhhhhcCC-------CCCChhhh---------------------------ccCCcchhhccCCCcEEE
Q 008274 477 ------------YTEKYMGL-------PSEDPVGY---------------------------EYSSVMHHVHKMKGKLLL 510 (571)
Q Consensus 477 ------------~~~~~~g~-------~~~~~~~~---------------------------~~~s~~~~~~~~~~p~ll 510 (571)
+....+.. ..+....+ ...+....+.++++|+++
T Consensus 251 ~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~li 330 (402)
T PLN02894 251 GLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTF 330 (402)
T ss_pred hccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEE
Confidence 00000000 00000000 011112336678899999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 511 VHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 511 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++|++|..++ .....+.+.+ +..+++++++++||.. ..++...+.+.+.+|++.+|
T Consensus 331 I~G~~D~i~~-~~~~~~~~~~---~~~~~~~~i~~aGH~~-~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 331 IYGRHDWMNY-EGAVEARKRM---KVPCEIIRVPQGGHFV-FLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred EEeCCCCCCc-HHHHHHHHHc---CCCCcEEEeCCCCCee-eccCHHHHHHHHHHHHHHhc
Confidence 9999998765 5455544433 4568899999999986 55778889999999988764
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.1e-15 Score=151.09 Aligned_cols=196 Identities=16% Similarity=0.161 Sum_probs=127.4
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|.||++||.+++.. .|......|.. +|.|+++|+||+|.+.... ......++.+.+..+.+.
T Consensus 131 ~~~vl~~HG~~~~~~-------~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~--------~~~~~~~~~~~~~~~~~~- 193 (371)
T PRK14875 131 GTPVVLIHGFGGDLN-------NWLFNHAALAA-GRPVIALDLPGHGASSKAV--------GAGSLDELAAAVLAFLDA- 193 (371)
T ss_pred CCeEEEECCCCCccc-------hHHHHHHHHhc-CCEEEEEcCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHh-
Confidence 477889999766543 23444555654 5999999999998764211 112355566655555554
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchh----------------hhhhcCCCCCC----
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY----------------TEKYMGLPSED---- 488 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----------------~~~~~g~~~~~---- 488 (571)
++..++.++|||+||.+++.++.++|++++++++.+|..........+ ....+..+...
T Consensus 194 -~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (371)
T PRK14875 194 -LGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQM 272 (371)
T ss_pred -cCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHH
Confidence 355689999999999999999999999999999887653211000000 00000000000
Q ss_pred -------------hhh--------h----ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEc
Q 008274 489 -------------PVG--------Y----EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIF 543 (571)
Q Consensus 489 -------------~~~--------~----~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 543 (571)
... + ...+....+.++++|+|+++|++|..+|+..+..+ ...+++.++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l-------~~~~~~~~~ 345 (371)
T PRK14875 273 VEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL-------PDGVAVHVL 345 (371)
T ss_pred HHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc-------cCCCeEEEe
Confidence 000 0 00122234667889999999999999998765443 235788899
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 544 PDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 544 ~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
|++||.+ ..++...+.+.|.+||+++
T Consensus 346 ~~~gH~~-~~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 346 PGAGHMP-QMEAAADVNRLLAEFLGKA 371 (371)
T ss_pred CCCCCCh-hhhCHHHHHHHHHHHhccC
Confidence 9999987 4466788889999998753
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.6e-15 Score=148.66 Aligned_cols=195 Identities=15% Similarity=0.137 Sum_probs=123.5
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|......|+ ++|.|+++|+||+|.+........... ..+|+.+.++.+
T Consensus 87 ~~vvliHG~~~~~~-------~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~~~~~~~----~a~~l~~~i~~~----- 149 (354)
T PLN02578 87 LPIVLIHGFGASAF-------HWRYNIPELA-KKYKVYALDLLGFGWSDKALIEYDAMV----WRDQVADFVKEV----- 149 (354)
T ss_pred CeEEEECCCCCCHH-------HHHHHHHHHh-cCCEEEEECCCCCCCCCCcccccCHHH----HHHHHHHHHHHh-----
Confidence 44688999766432 2344455665 479999999999998764321100000 023444444444
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc---------------cc-----c---hh---------
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG---------------YD-----T---FY--------- 477 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~---------------~~-----~---~~--------- 477 (571)
..+++.++|||+||++++.++.++|++++++++.++...+.. .. . .+
T Consensus 150 -~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (354)
T PLN02578 150 -VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLF 228 (354)
T ss_pred -ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHH
Confidence 236799999999999999999999999999988765322110 00 0 00
Q ss_pred --------hhh----hcCCCC--------------CCh---hhh-----------ccCCcchhhccCCCcEEEEecCCCC
Q 008274 478 --------TEK----YMGLPS--------------EDP---VGY-----------EYSSVMHHVHKMKGKLLLVHGMIDE 517 (571)
Q Consensus 478 --------~~~----~~g~~~--------------~~~---~~~-----------~~~s~~~~~~~~~~p~lli~G~~D~ 517 (571)
.+. ....+. .++ +.+ ...+....+.++++|+|+++|++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~ 308 (354)
T PLN02578 229 WQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDP 308 (354)
T ss_pred HHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCC
Confidence 000 000000 000 000 0111223456788999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 518 NVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 518 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.++...+..+.+.+ .+.+++.+ ++||.+ ..+....+.+.|.+|++
T Consensus 309 ~v~~~~~~~l~~~~----p~a~l~~i-~~GH~~-~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 309 WVGPAKAEKIKAFY----PDTTLVNL-QAGHCP-HDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCHHHHHHHHHhC----CCCEEEEe-CCCCCc-cccCHHHHHHHHHHHHh
Confidence 99999888776655 45677777 589987 56788889999999986
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-14 Score=139.40 Aligned_cols=181 Identities=17% Similarity=0.109 Sum_probs=121.2
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccC
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNC 409 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~ 409 (571)
..+++.++.|... +++|+||++||+..... .|...++.|+++||.|+++|++|.++...
T Consensus 37 ~~~p~~v~~P~~~----g~~PvVv~lHG~~~~~~-------~y~~l~~~Las~G~~VvapD~~g~~~~~~---------- 95 (313)
T PLN00021 37 PPKPLLVATPSEA----GTYPVLLFLHGYLLYNS-------FYSQLLQHIASHGFIVVAPQLYTLAGPDG---------- 95 (313)
T ss_pred CCceEEEEeCCCC----CCCCEEEEECCCCCCcc-------cHHHHHHHHHhCCCEEEEecCCCcCCCCc----------
Confidence 4688899999753 67899999999765422 34556788999999999999997532211
Q ss_pred CCCCchhHHHHHHHHHHc--------CCCcCCcEEEEeechHHHHHHHHHhcCCC-----eeEEEEEcCccCCcccccch
Q 008274 410 GRIDAEDQLTGAEWLIKQ--------GLAKVGHIGLYGWSYGGYLSAITLARFPD-----VFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~--------~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~ 476 (571)
...++|..++++|+.+. ..+|.++++|+|||+||.+++.++.++++ .|++++..+|+.......
T Consensus 96 -~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~-- 172 (313)
T PLN00021 96 -TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK-- 172 (313)
T ss_pred -hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc--
Confidence 11245566666666542 23577899999999999999999998774 578888888875431100
Q ss_pred hhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCC-----C----CChH-HHHHHHHHHHHcCCCeeEEEcCCC
Q 008274 477 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDE-----N----VHFR-HTARLINALVAARKPYEILIFPDE 546 (571)
Q Consensus 477 ~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~-----~----v~~~-~~~~~~~~l~~~~~~~~~~~~~~~ 546 (571)
...+..+ .. .....++..|+|++++..|. . .|.. +..++++.+ ..+..+.+.+++
T Consensus 173 ---------~~~p~il-~~--~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~---~~~~~~~~~~~~ 237 (313)
T PLN00021 173 ---------QTPPPVL-TY--APHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNEC---KAPAVHFVAKDY 237 (313)
T ss_pred ---------CCCCccc-cc--CcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhc---CCCeeeeeecCC
Confidence 0000000 00 01123367899999999763 2 2233 336666655 567888899999
Q ss_pred CCC
Q 008274 547 RHM 549 (571)
Q Consensus 547 ~H~ 549 (571)
||.
T Consensus 238 gH~ 240 (313)
T PLN00021 238 GHM 240 (313)
T ss_pred Ccc
Confidence 996
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.2e-15 Score=133.39 Aligned_cols=174 Identities=17% Similarity=0.110 Sum_probs=111.1
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHh--CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRS--KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
|.||++||.+++.. .|.. ..+...+.+ .+|.|+++|+||++ ++..+.+..+.++
T Consensus 2 p~illlHGf~ss~~---~~~~--~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~ 57 (190)
T PRK11071 2 STLLYLHGFNSSPR---SAKA--TLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLE 57 (190)
T ss_pred CeEEEECCCCCCcc---hHHH--HHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHH
Confidence 67999999776644 2321 123455554 38999999999762 1233444444443
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCC---CC------Chhh---hccC
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLP---SE------DPVG---YEYS 495 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~---~~------~~~~---~~~~ 495 (571)
. +.+++.++|+|+||++++.++.++|. + +|+.+|..+... ....+.+.. .. .... ....
T Consensus 58 ~--~~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 128 (190)
T PRK11071 58 H--GGDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFE----LLTDYLGENENPYTGQQYVLESRHIYDLKVM 128 (190)
T ss_pred c--CCCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHH----HHHHhcCCcccccCCCcEEEcHHHHHHHHhc
Confidence 2 34689999999999999999999884 3 456666554210 001111110 00 0011 1111
Q ss_pred CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 496 SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 496 s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.+.. +. ..+|++++||++|++||++.+.++++. ++.+++++++|.+.. .+...+.+.+||.
T Consensus 129 ~~~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~~-------~~~~~~~ggdH~f~~---~~~~~~~i~~fl~ 189 (190)
T PRK11071 129 QIDP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYAA-------CRQTVEEGGNHAFVG---FERYFNQIVDFLG 189 (190)
T ss_pred CCcc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHHh-------cceEEECCCCcchhh---HHHhHHHHHHHhc
Confidence 1111 22 457899999999999999999999884 255678999999943 4778899999975
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.4e-15 Score=139.76 Aligned_cols=189 Identities=10% Similarity=0.042 Sum_probs=118.9
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+++.. .|...+..| .+|.|+++|+||+|.+..... ..+++..+.+..++++.
T Consensus 3 p~vvllHG~~~~~~-------~w~~~~~~l--~~~~vi~~D~~G~G~S~~~~~---------~~~~~~~~~l~~~l~~~- 63 (242)
T PRK11126 3 PWLVFLHGLLGSGQ-------DWQPVGEAL--PDYPRLYIDLPGHGGSAAISV---------DGFADVSRLLSQTLQSY- 63 (242)
T ss_pred CEEEEECCCCCChH-------HHHHHHHHc--CCCCEEEecCCCCCCCCCccc---------cCHHHHHHHHHHHHHHc-
Confidence 67899999877643 344456666 379999999999998753211 12344444444444432
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCC-eeEEEEEcCccCCccccc---------chhhh------------hhc-----
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGAPVTSWDGYD---------TFYTE------------KYM----- 482 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~-~~~~~v~~~~~~~~~~~~---------~~~~~------------~~~----- 482 (571)
+.+++.++||||||.+++.++.++|+ +++++++.++........ ..+.. .++
T Consensus 64 -~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (242)
T PRK11126 64 -NILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVF 142 (242)
T ss_pred -CCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchh
Confidence 45789999999999999999999865 488888876543211000 00000 000
Q ss_pred C-CCCCChhhhc----------------------cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCee
Q 008274 483 G-LPSEDPVGYE----------------------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539 (571)
Q Consensus 483 g-~~~~~~~~~~----------------------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 539 (571)
. ........+. ..+....+.++++|+|+++|++|..+. .+.+. .+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-----~~~~ 212 (242)
T PRK11126 143 ASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-----LALP 212 (242)
T ss_pred hccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-----hcCe
Confidence 0 0000000000 001123456788999999999998542 22221 2678
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+++++++||.+ ..++.+.+.+.+.+||.+
T Consensus 213 ~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 213 LHVIPNAGHNA-HRENPAAFAASLAQILRL 241 (242)
T ss_pred EEEeCCCCCch-hhhChHHHHHHHHHHHhh
Confidence 99999999987 457788999999999875
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.7e-15 Score=146.30 Aligned_cols=229 Identities=10% Similarity=0.046 Sum_probs=133.0
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHH---H
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA---S 404 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~---~ 404 (571)
+|.++++..+.+.. +.+.|+||++||.+++.. .|.... .....|...+|.|+++|+||+|.+...... .
T Consensus 24 ~~~~l~y~~~G~~~----~~~~~~vll~~~~~~~~~---~~~~~~-~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 95 (339)
T PRK07581 24 PDARLAYKTYGTLN----AAKDNAILYPTWYSGTHQ---DNEWLI-GPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPF 95 (339)
T ss_pred CCceEEEEecCccC----CCCCCEEEEeCCCCCCcc---cchhhc-cCCCccCcCceEEEEecCCCCCCCCCCCCCCCCC
Confidence 44556555444321 123477787787665432 121000 001245567999999999999977532110 0
Q ss_pred HhccCCCCCc-hhHHHHHHHHHHcCCCcCCcE-EEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc-----------
Q 008274 405 IKHNCGRIDA-EDQLTGAEWLIKQGLAKVGHI-GLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD----------- 471 (571)
Q Consensus 405 ~~~~~~~~~~-~D~~~~~~~l~~~~~~d~~~i-~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~----------- 471 (571)
....+....+ +|+.+....+.+.- ..+++ .|+||||||++++.++.++|++++++|+.++.....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~~l--gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~ 173 (339)
T PRK07581 96 NAARFPHVTIYDNVRAQHRLLTEKF--GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLK 173 (339)
T ss_pred CCCCCCceeHHHHHHHHHHHHHHHh--CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHH
Confidence 0001001112 33443333344432 34674 789999999999999999999999988775432100
Q ss_pred -------c-----cc-----------c-h----hhhhhcCCC------C-----------------CChhhh-------c
Q 008274 472 -------G-----YD-----------T-F----YTEKYMGLP------S-----------------EDPVGY-------E 493 (571)
Q Consensus 472 -------~-----~~-----------~-~----~~~~~~g~~------~-----------------~~~~~~-------~ 493 (571)
. +. . . +...++... . .++..+ .
T Consensus 174 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 253 (339)
T PRK07581 174 AALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQ 253 (339)
T ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhh
Confidence 0 00 0 0 000000000 0 000000 0
Q ss_pred ------c----CCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCC-CCCCCCCCCcHHHHHHH
Q 008274 494 ------Y----SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD-ERHMPRRHRDRIYMEER 562 (571)
Q Consensus 494 ------~----~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~ 562 (571)
. .+....+.++++|+|+++|++|..+++..+..+.+.+ .+.+++++++ +||.. ..++..++...
T Consensus 254 ~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i----p~a~l~~i~~~~GH~~-~~~~~~~~~~~ 328 (339)
T PRK07581 254 RGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI----PNAELRPIESIWGHLA-GFGQNPADIAF 328 (339)
T ss_pred hcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC----CCCeEEEeCCCCCccc-cccCcHHHHHH
Confidence 0 0122345678899999999999999999888877665 4468889999 89976 44667788899
Q ss_pred HHHHHHHhC
Q 008274 563 IWEFIERTL 571 (571)
Q Consensus 563 i~~fl~~~l 571 (571)
+.+||++.|
T Consensus 329 ~~~~~~~~~ 337 (339)
T PRK07581 329 IDAALKELL 337 (339)
T ss_pred HHHHHHHHH
Confidence 999998764
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-15 Score=144.74 Aligned_cols=216 Identities=19% Similarity=0.255 Sum_probs=114.7
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCce-----------eecccccccchhhhHHHHhCCcEE
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQ-----------LVCDSWINTVDMRAQYLRSKGILV 386 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~-----------~~~~~~~~~~~~~~~~l~~~G~~v 386 (571)
..|.+.|...++..++++++.|++. .++.|+||++||.++.. .+.+.+...-..++..|+++||+|
T Consensus 87 ~~EKv~f~~~p~~~vpaylLvPd~~---~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVv 163 (390)
T PF12715_consen 87 TREKVEFNTTPGSRVPAYLLVPDGA---KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVV 163 (390)
T ss_dssp EEEEEEE--STTB-EEEEEEEETT-----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEE
T ss_pred EEEEEEEEccCCeeEEEEEEecCCC---CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEE
Confidence 5688899988999999999999874 26899999999943322 111112222233578999999999
Q ss_pred EEECCCCCCCChhhh---------HHHH---hccCC----CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHH
Q 008274 387 WKLDNRGTARRGLKF---------EASI---KHNCG----RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAIT 450 (571)
Q Consensus 387 ~~~d~rG~~~~~~~~---------~~~~---~~~~~----~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 450 (571)
+++|.+|.|.++..- .... ...+| ....-|...+++||.+++.+|++||+++|+||||+.++++
T Consensus 164 la~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~L 243 (390)
T PF12715_consen 164 LAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWL 243 (390)
T ss_dssp EEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHH
Confidence 999999987654310 0011 11111 1234567779999999999999999999999999999999
Q ss_pred HhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCC-------------hhhhccCCcchhhccCC-CcEEEEecCCC
Q 008274 451 LARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSED-------------PVGYEYSSVMHHVHKMK-GKLLLVHGMID 516 (571)
Q Consensus 451 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~s~~~~~~~~~-~p~lli~G~~D 516 (571)
++. .++++++|+.+-+..+..- ...+..+..+ +..+...+-..-+.-+. .|+|++.|..|
T Consensus 244 aAL-DdRIka~v~~~~l~~~~~~-----~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~D 317 (390)
T PF12715_consen 244 AAL-DDRIKATVANGYLCTTQER-----ALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKD 317 (390)
T ss_dssp HHH--TT--EEEEES-B--HHHH-----HHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-H
T ss_pred HHc-chhhHhHhhhhhhhccchh-----hHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcc
Confidence 986 4677887766543321100 0011111110 11111111111222222 59999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCeeEEEcCC
Q 008274 517 ENVHFRHTARLINALVAARKPYEILIFPD 545 (571)
Q Consensus 517 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 545 (571)
..++. .+..++.. .++-++++..||.
T Consensus 318 klf~i--V~~AY~~~-~~p~n~~~~~~p~ 343 (390)
T PF12715_consen 318 KLFPI--VRRAYAIM-GAPDNFQIHHYPK 343 (390)
T ss_dssp HHHHH--HHHHHHHT-T-GGGEEE---GG
T ss_pred cccHH--HHHHHHhc-CCCcceEEeeccc
Confidence 87654 22233222 2235788888886
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.6e-16 Score=143.58 Aligned_cols=179 Identities=20% Similarity=0.260 Sum_probs=118.0
Q ss_pred EEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCc
Q 008274 352 LISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAK 431 (571)
Q Consensus 352 vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 431 (571)
||++||.+++.. .|..++..| ++||.|+++|+||+|.+..... ......++..+.+..+++.- .
T Consensus 1 vv~~hG~~~~~~-------~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~l~~~l~~~--~ 64 (228)
T PF12697_consen 1 VVFLHGFGGSSE-------SWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPD------YSPYSIEDYAEDLAELLDAL--G 64 (228)
T ss_dssp EEEE-STTTTGG-------GGHHHHHHH-HTTSEEEEEECTTSTTSSSHSS------GSGGSHHHHHHHHHHHHHHT--T
T ss_pred eEEECCCCCCHH-------HHHHHHHHH-hCCCEEEEEecCCccccccccc------cCCcchhhhhhhhhhccccc--c
Confidence 689999877643 345567778 4899999999999987764221 11122344444444444432 2
Q ss_pred CCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc------chhh--------------hhhcC--CCCCCh
Q 008274 432 VGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD------TFYT--------------EKYMG--LPSEDP 489 (571)
Q Consensus 432 ~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~------~~~~--------------~~~~g--~~~~~~ 489 (571)
.+++.++|||+||.+++.++.++|++++++++.+|........ .... ...+. ......
T Consensus 65 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (228)
T PF12697_consen 65 IKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEP 144 (228)
T ss_dssp TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cccccccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccc
Confidence 3689999999999999999999999999999999887532110 0000 00000 000000
Q ss_pred --------hh--------hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 490 --------VG--------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 490 --------~~--------~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
.. ....+....+.++++|+++++|++|..++.+....+.+.+ .+++++++|++||.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~ 217 (228)
T PF12697_consen 145 EDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL----PNAELVVIPGAGHFL 217 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS----TTEEEEEETTSSSTH
T ss_pred cccccccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCcc
Confidence 00 0122333567788999999999999999977666665543 578999999999986
|
... |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-15 Score=140.59 Aligned_cols=178 Identities=23% Similarity=0.183 Sum_probs=119.9
Q ss_pred EEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc---
Q 008274 352 LISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ--- 427 (571)
Q Consensus 352 vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--- 427 (571)
||++|||++....... ...++..++ +.|+.|+.+|||-..... ....++|+.++++|+.++
T Consensus 1 v~~~HGGg~~~g~~~~----~~~~~~~la~~~g~~v~~~~Yrl~p~~~-----------~p~~~~D~~~a~~~l~~~~~~ 65 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES----HWPFAARLAAERGFVVVSIDYRLAPEAP-----------FPAALEDVKAAYRWLLKNADK 65 (211)
T ss_dssp EEEE--STTTSCGTTT----HHHHHHHHHHHHTSEEEEEE---TTTSS-----------TTHHHHHHHHHHHHHHHTHHH
T ss_pred CEEECCcccccCChHH----HHHHHHHHHhhccEEEEEeecccccccc-----------ccccccccccceeeecccccc
Confidence 7899999887542222 233455566 499999999999654321 112378999999999987
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCC----CeeEEEEEcCccCCc-ccccchh--------------------hhhhc
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFP----DVFQCAVSGAPVTSW-DGYDTFY--------------------TEKYM 482 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~----~~~~~~v~~~~~~~~-~~~~~~~--------------------~~~~~ 482 (571)
..+|.++|+|+|+|.||.+++.++.... ..++++++.+|+.++ ......+ .+.+.
T Consensus 66 ~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (211)
T PF07859_consen 66 LGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYL 145 (211)
T ss_dssp HTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHH
T ss_pred ccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccccccccccccccccccccccccc
Confidence 3468999999999999999999886422 248999999998876 2111111 01111
Q ss_pred CCCCCChhhhccCCcchhhccCC--CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 483 GLPSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 483 g~~~~~~~~~~~~s~~~~~~~~~--~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
+ .........+|+.. ..++ +|++|++|+.|..+ .++..++++|++.|++++++++++..|.+
T Consensus 146 ~---~~~~~~~~~sp~~~-~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 146 P---GSDRDDPLASPLNA-SDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGF 209 (211)
T ss_dssp S---TGGTTSTTTSGGGS-SCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTG
T ss_pred c---cccccccccccccc-cccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEe
Confidence 1 01111223455544 2333 59999999999875 58899999999999999999999999986
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.4e-14 Score=132.34 Aligned_cols=211 Identities=16% Similarity=0.106 Sum_probs=134.5
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhh
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK 400 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~ 400 (571)
.+.++.+.|. +.++++.|.+. ++.|+||++||.+.... .+...+...++.|+++||.|+.+|+||+|.+...
T Consensus 2 ~~~l~~~~g~-~~~~~~~p~~~----~~~~~VlllHG~g~~~~---~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~ 73 (266)
T TIGR03101 2 PFFLDAPHGF-RFCLYHPPVAV----GPRGVVIYLPPFAEEMN---KSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGD 73 (266)
T ss_pred CEEecCCCCc-EEEEEecCCCC----CCceEEEEECCCccccc---chhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCc
Confidence 3566666665 56777777642 35689999999654322 1222344567889999999999999999877543
Q ss_pred hHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhh-
Q 008274 401 FEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTE- 479 (571)
Q Consensus 401 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~- 479 (571)
........ ..+|+.++++++.+.. ..+++|+||||||.+++.++.++|+.++++|+.+|+..-..+...+..
T Consensus 74 ~~~~~~~~----~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl 146 (266)
T TIGR03101 74 FAAARWDV----WKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRL 146 (266)
T ss_pred cccCCHHH----HHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHH
Confidence 32111111 2578888898887653 468999999999999999999999999999999998764332221100
Q ss_pred ----hhc-CCCCCChh----hhccC----------Cc--chhhcc--------CCCcEEEEecCCC-CCCChHHHHHHHH
Q 008274 480 ----KYM-GLPSEDPV----GYEYS----------SV--MHHVHK--------MKGKLLLVHGMID-ENVHFRHTARLIN 529 (571)
Q Consensus 480 ----~~~-g~~~~~~~----~~~~~----------s~--~~~~~~--------~~~p~lli~G~~D-~~v~~~~~~~~~~ 529 (571)
+.+ +....... ..... +| ...+++ -..++|++.-.-+ ..-......++.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 226 (266)
T TIGR03101 147 RLVARRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATLSPVFSRLGE 226 (266)
T ss_pred HHHHHhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCCCHHHHHHHH
Confidence 001 11100000 00000 00 001111 1347788876433 2223456788899
Q ss_pred HHHHcCCCeeEEEcCCC
Q 008274 530 ALVAARKPYEILIFPDE 546 (571)
Q Consensus 530 ~l~~~~~~~~~~~~~~~ 546 (571)
++++.|+.++...|++.
T Consensus 227 ~~~~~g~~v~~~~~~~~ 243 (266)
T TIGR03101 227 QWVQSGVEVTVDLVPGP 243 (266)
T ss_pred HHHHcCCeEeeeecCCc
Confidence 99999999999999997
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-14 Score=144.32 Aligned_cols=234 Identities=15% Similarity=0.084 Sum_probs=140.3
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccc----cccchhhh---HHHHhCCcEEEEECCCC--CCCCh
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW----INTVDMRA---QYLRSKGILVWKLDNRG--TARRG 398 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~----~~~~~~~~---~~l~~~G~~v~~~d~rG--~~~~~ 398 (571)
+|.++.+..+.+.+. ...|.||++||.+++....... ...|.... ..|...+|.|+++|+|| +|.++
T Consensus 14 ~~~~~~y~~~g~~~~----~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~ 89 (351)
T TIGR01392 14 SDVRVAYETYGTLNA----ERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTG 89 (351)
T ss_pred CCceEEEEeccccCC----CCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCC
Confidence 556777777765321 1236889999976653211000 00122221 24557899999999999 33333
Q ss_pred hhhH-HHH--h-ccCCCCCchhHHHHHHHHHHcCCCcCCc-EEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc
Q 008274 399 LKFE-ASI--K-HNCGRIDAEDQLTGAEWLIKQGLAKVGH-IGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY 473 (571)
Q Consensus 399 ~~~~-~~~--~-~~~~~~~~~D~~~~~~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~ 473 (571)
..-. ... . .+.....++|+.+.+..+++.- ..++ +.++||||||.+++.++.++|++++++|+.++.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (351)
T TIGR01392 90 PSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL--GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAW 167 (351)
T ss_pred CCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHH
Confidence 2100 000 0 0111234667776666666543 3456 999999999999999999999999998887765321100
Q ss_pred cch-----------------------------h-----------------hhhhcCCC-CC-----------Chhhh---
Q 008274 474 DTF-----------------------------Y-----------------TEKYMGLP-SE-----------DPVGY--- 492 (571)
Q Consensus 474 ~~~-----------------------------~-----------------~~~~~g~~-~~-----------~~~~~--- 492 (571)
... + ...+.... .. ..+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
T TIGR01392 168 CIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRY 247 (351)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHH
Confidence 000 0 00000000 00 00001
Q ss_pred ---------------------ccCC-------cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEE-Ec
Q 008274 493 ---------------------EYSS-------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL-IF 543 (571)
Q Consensus 493 ---------------------~~~s-------~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~-~~ 543 (571)
...+ ....+.+|++|+|+++|++|..+|+..++.+.+.+......++++ ++
T Consensus 248 ~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~ 327 (351)
T TIGR01392 248 QGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIE 327 (351)
T ss_pred HHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeC
Confidence 0000 123456788999999999999999999999999887654444443 45
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 544 PDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 544 ~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+++||.. ..+..+.+.+.+.+||+
T Consensus 328 ~~~GH~~-~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 328 SPYGHDA-FLVETDQVEELIRGFLR 351 (351)
T ss_pred CCCCcch-hhcCHHHHHHHHHHHhC
Confidence 7899987 44678888999999974
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-14 Score=140.37 Aligned_cols=196 Identities=15% Similarity=0.132 Sum_probs=124.1
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.... .|......|. ++|.|+++|+||+|.+..... .....+++.+.+..++++-
T Consensus 35 ~~iv~lHG~~~~~~-------~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~~~~~- 98 (286)
T PRK03204 35 PPILLCHGNPTWSF-------LYRDIIVALR-DRFRCVAPDYLGFGLSERPSG-------FGYQIDEHARVIGEFVDHL- 98 (286)
T ss_pred CEEEEECCCCccHH-------HHHHHHHHHh-CCcEEEEECCCCCCCCCCCCc-------cccCHHHHHHHHHHHHHHh-
Confidence 67888999764321 3444555665 469999999999987753210 1123566777777666653
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC-Cccc-----cc---------------chhhhhhcCC-C--
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT-SWDG-----YD---------------TFYTEKYMGL-P-- 485 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~-~~~~-----~~---------------~~~~~~~~g~-~-- 485 (571)
+.+++.++||||||.+++.++..+|++++++|..++.. .... +. ..+.++++.. +
T Consensus 99 -~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (286)
T PRK03204 99 -GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEH 177 (286)
T ss_pred -CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccccC
Confidence 45689999999999999999999999999988766542 1000 00 0001111100 0
Q ss_pred CCC---hhhhccC--------------------C-cchhh----cc--CCCcEEEEecCCCCCCChH-HHHHHHHHHHHc
Q 008274 486 SED---PVGYEYS--------------------S-VMHHV----HK--MKGKLLLVHGMIDENVHFR-HTARLINALVAA 534 (571)
Q Consensus 486 ~~~---~~~~~~~--------------------s-~~~~~----~~--~~~p~lli~G~~D~~v~~~-~~~~~~~~l~~~ 534 (571)
... ...+... . .+..+ .+ +++|+|+++|++|..+++. ..+.+.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~i--- 254 (286)
T PRK03204 178 RPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATF--- 254 (286)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhc---
Confidence 000 0011000 0 00001 11 1689999999999988655 345555544
Q ss_pred CCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 535 RKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 535 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
.+.++++++++||.+ ..+..+.+.+.+.+||
T Consensus 255 -p~~~~~~i~~aGH~~-~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 255 -PDHVLVELPNAKHFI-QEDAPDRIAAAIIERF 285 (286)
T ss_pred -CCCeEEEcCCCcccc-cccCHHHHHHHHHHhc
Confidence 567899999999997 5578889999999987
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.8e-15 Score=146.66 Aligned_cols=177 Identities=15% Similarity=0.128 Sum_probs=112.3
Q ss_pred HHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCc-EEEEeechHHHHHHHHHhcCCC
Q 008274 378 YLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGH-IGLYGWSYGGYLSAITLARFPD 456 (571)
Q Consensus 378 ~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~~~~~~~ 456 (571)
.|...+|.|+++|+||+|.+... .....+..+.+..+++.- +.++ +.++||||||++++.++.++|+
T Consensus 94 ~L~~~~~~Vi~~Dl~G~g~s~~~----------~~~~~~~a~dl~~ll~~l--~l~~~~~lvG~SmGG~vA~~~A~~~P~ 161 (343)
T PRK08775 94 ALDPARFRLLAFDFIGADGSLDV----------PIDTADQADAIALLLDAL--GIARLHAFVGYSYGALVGLQFASRHPA 161 (343)
T ss_pred ccCccccEEEEEeCCCCCCCCCC----------CCCHHHHHHHHHHHHHHc--CCCcceEEEEECHHHHHHHHHHHHChH
Confidence 34456899999999998755211 111333333333343332 3334 5799999999999999999999
Q ss_pred eeEEEEEcCccCCcccccch--------------------------------------hhhhhcCCCC-------CChh-
Q 008274 457 VFQCAVSGAPVTSWDGYDTF--------------------------------------YTEKYMGLPS-------EDPV- 490 (571)
Q Consensus 457 ~~~~~v~~~~~~~~~~~~~~--------------------------------------~~~~~~g~~~-------~~~~- 490 (571)
+++++|+.++.......... +...+...+. ....
T Consensus 162 ~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T PRK08775 162 RVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAED 241 (343)
T ss_pred hhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHH
Confidence 99999988765321100000 0000000000 0000
Q ss_pred --------hhccCCc-------------chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCC-CCC
Q 008274 491 --------GYEYSSV-------------MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD-ERH 548 (571)
Q Consensus 491 --------~~~~~s~-------------~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~-~~H 548 (571)
.....++ ...+.++++|+|+++|++|..+|++....+.+.+ ..+.+++++++ +||
T Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i---~p~a~l~~i~~~aGH 318 (343)
T PRK08775 242 YLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGL---GPRGSLRVLRSPYGH 318 (343)
T ss_pred HHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHc---CCCCeEEEEeCCccH
Confidence 0000000 0124577899999999999999999888887765 34678999985 999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHh
Q 008274 549 MPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 549 ~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.. ..+..+.+.+.+.+||++.
T Consensus 319 ~~-~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 319 DA-FLKETDRIDAILTTALRST 339 (343)
T ss_pred HH-HhcCHHHHHHHHHHHHHhc
Confidence 87 4577889999999999763
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.8e-14 Score=139.26 Aligned_cols=194 Identities=20% Similarity=0.184 Sum_probs=139.9
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+|++.|-++-..+.+ .........+.|+||++.+++..-......+||+.|+++|+..++...... +
T Consensus 173 ~~l~~~D~dg~~~~~l---------~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~---~ 240 (425)
T COG0823 173 YELALGDYDGYNQQKL---------TDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGN---N 240 (425)
T ss_pred ceEEEEccCCcceeEe---------cccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCc---c
Confidence 4566666664443443 234556677999999998877754443336899999999998777653221 1
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
..+ .|++|+ ++|.++++|-.+||++|+.+++.++||.+.-....+ .|+|||++|+|.+++.+. .+|
T Consensus 241 ~~P---------~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~P-s~spdG~~ivf~Sdr~G~--p~I 308 (425)
T COG0823 241 GAP---------AFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSP-SWSPDGSKIVFTSDRGGR--PQI 308 (425)
T ss_pred CCc---------cCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCc-cCCCCCCEEEEEeCCCCC--cce
Confidence 112 445554 889999999999999999999999999876544444 599999999999999886 699
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCceE-EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKGKH-VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQ 304 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g~~-~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~ 304 (571)
|++++ +|. ..+++|...+.. ...+||||++++|....... -.+...++.++..++.++..
T Consensus 309 ~~~~~--~g~----~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~-~~i~~~~~~~~~~~~~lt~~ 369 (425)
T COG0823 309 YLYDL--EGS----QVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQ-WDIDKNDLASGGKIRILTST 369 (425)
T ss_pred EEECC--CCC----ceeEeeccCCCCcCccCCCCCCEEEEEeccCCc-eeeEEeccCCCCcEEEcccc
Confidence 99998 665 667888765433 55999999999998754222 45666666556545555543
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.2e-14 Score=127.90 Aligned_cols=182 Identities=18% Similarity=0.126 Sum_probs=124.8
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCC-------chhHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRID-------AEDQLT 419 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~-------~~D~~~ 419 (571)
...|+||++||.+++.. ++.+ ..+.+.. .+.++.+..+-.-..+..|. .....+..+ ...+.+
T Consensus 16 p~~~~iilLHG~Ggde~---~~~~----~~~~~~P-~~~~is~rG~v~~~g~~~~f--~~~~~~~~d~edl~~~~~~~~~ 85 (207)
T COG0400 16 PAAPLLILLHGLGGDEL---DLVP----LPELILP-NATLVSPRGPVAENGGPRFF--RRYDEGSFDQEDLDLETEKLAE 85 (207)
T ss_pred CCCcEEEEEecCCCChh---hhhh----hhhhcCC-CCeEEcCCCCccccCcccce--eecCCCccchhhHHHHHHHHHH
Confidence 45689999999665532 2211 2333333 36666654332111111111 111112222 233555
Q ss_pred HHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcch
Q 008274 420 GAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMH 499 (571)
Q Consensus 420 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~ 499 (571)
+++.+.++..+|.+|++++|+|.||.+++.+..++|..|+++++.+|...... .
T Consensus 86 ~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~-------------~------------- 139 (207)
T COG0400 86 FLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP-------------E------------- 139 (207)
T ss_pred HHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC-------------c-------------
Confidence 66666666778999999999999999999999999999999999988653210 0
Q ss_pred hhc-cCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 500 HVH-KMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 500 ~~~-~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
... .-.+|+|++||+.|++||...+.++.+.|++.|.+++...++ .||.+. ....+.+.+|+...
T Consensus 140 ~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~-----~e~~~~~~~wl~~~ 205 (207)
T COG0400 140 LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIP-----PEELEAARSWLANT 205 (207)
T ss_pred cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCC-----HHHHHHHHHHHHhc
Confidence 111 224799999999999999999999999999999999999999 799982 34456777888765
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.1e-14 Score=141.85 Aligned_cols=223 Identities=17% Similarity=0.174 Sum_probs=138.6
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGR 411 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~ 411 (571)
+..+.|.|... ...+.| ||++||-.......+. .....++..|+++||.|+++|+||.+.+.... ...+
T Consensus 48 ~~l~~~~~~~~--~~~~~p-vl~v~~~~~~~~~~d~--~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~------~~~d 116 (350)
T TIGR01836 48 VVLYRYTPVKD--NTHKTP-LLIVYALVNRPYMLDL--QEDRSLVRGLLERGQDVYLIDWGYPDRADRYL------TLDD 116 (350)
T ss_pred EEEEEecCCCC--cCCCCc-EEEeccccccceeccC--CCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC------CHHH
Confidence 44455666532 112345 6778984322221111 12345689999999999999999876432211 1111
Q ss_pred CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-----------------
Q 008274 412 IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD----------------- 474 (571)
Q Consensus 412 ~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~----------------- 474 (571)
....|+.++++++.++. ...++.++|||+||.+++.+++.+|+.++++++.++..+.....
T Consensus 117 ~~~~~~~~~v~~l~~~~--~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 194 (350)
T TIGR01836 117 YINGYIDKCVDYICRTS--KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVD 194 (350)
T ss_pred HHHHHHHHHHHHHHHHh--CCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHH
Confidence 11245778888888764 34689999999999999999999999999999888766532110
Q ss_pred ------chh--------------hhhhcCCCC--CCh---hhh--------------------------ccCC-------
Q 008274 475 ------TFY--------------TEKYMGLPS--EDP---VGY--------------------------EYSS------- 496 (571)
Q Consensus 475 ------~~~--------------~~~~~g~~~--~~~---~~~--------------------------~~~s------- 496 (571)
..+ ...+..... .+. +.| ....
T Consensus 195 ~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~ 274 (350)
T TIGR01836 195 TMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVE 274 (350)
T ss_pred hcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeE
Confidence 000 000000000 000 000 0000
Q ss_pred ---cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC--CCCCcHHHHHHHHHHHHHHh
Q 008274 497 ---VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP--RRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 497 ---~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~--~~~~~~~~~~~~i~~fl~~~ 570 (571)
....+.++++|+|+++|++|..++++.+..+++.+.. .+.+++++++ ||.. ......+.+++.+.+||+++
T Consensus 275 ~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~--~~~~~~~~~~-gH~~~~~~~~~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 275 IGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSS--EDYTELSFPG-GHIGIYVSGKAQKEVPPAIGKWLQAR 350 (350)
T ss_pred ECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCC--CCeEEEEcCC-CCEEEEECchhHhhhhHHHHHHHHhC
Confidence 0112556789999999999999999999988887632 4678888885 6653 23334788999999999864
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=5e-14 Score=130.55 Aligned_cols=202 Identities=16% Similarity=0.141 Sum_probs=131.0
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCC----chhHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRID----AEDQLTGAE 422 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~----~~D~~~~~~ 422 (571)
+.-|+|+++||-|.... .|+.....|+++||.|+++|.||.|.+...-. ..... ..|+...++
T Consensus 42 ~~gP~illlHGfPe~wy-------swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~------~~~Yt~~~l~~di~~lld 108 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWY-------SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPH------ISEYTIDELVGDIVALLD 108 (322)
T ss_pred CCCCEEEEEccCCccch-------hhhhhhhhhhhcceEEEecCCCCCCCCCCCCC------cceeeHHHHHHHHHHHHH
Confidence 34599999999777643 34556788999999999999999987653211 11112 344555555
Q ss_pred HHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc----------cc-cchh---------hh---
Q 008274 423 WLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD----------GY-DTFY---------TE--- 479 (571)
Q Consensus 423 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~----------~~-~~~~---------~~--- 479 (571)
.|. -+|+.++||++||.+|..++..+|+++++.|..+...... .+ ...| .+
T Consensus 109 ~Lg------~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~ 182 (322)
T KOG4178|consen 109 HLG------LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETEL 182 (322)
T ss_pred Hhc------cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhh
Confidence 542 5799999999999999999999999999998876544310 00 0000 00
Q ss_pred ------h----hc----C----CC---CCC--------hhhh-------------------ccCC--cchhhccCCCcEE
Q 008274 480 ------K----YM----G----LP---SED--------PVGY-------------------EYSS--VMHHVHKMKGKLL 509 (571)
Q Consensus 480 ------~----~~----g----~~---~~~--------~~~~-------------------~~~s--~~~~~~~~~~p~l 509 (571)
. +. + .+ ..+ .+.| ..+. ......+++.|++
T Consensus 183 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~ 262 (322)
T KOG4178|consen 183 SKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVL 262 (322)
T ss_pred ccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceE
Confidence 0 00 0 00 000 0000 0011 1233556788999
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 510 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 510 li~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++.|+.|.+.+...-.+.+++... ...+.++++++||.. ..++...+.+.+++||++.
T Consensus 263 fi~G~~D~v~~~p~~~~~~rk~vp--~l~~~vv~~~~gH~v-qqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 263 FIWGDLDPVLPYPIFGELYRKDVP--RLTERVVIEGIGHFV-QQEKPQEVNQAILGFINSF 320 (322)
T ss_pred EEEecCcccccchhHHHHHHHhhc--cccceEEecCCcccc-cccCHHHHHHHHHHHHHhh
Confidence 999999999887633333333211 223678999999988 5688899999999999874
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.6e-14 Score=142.51 Aligned_cols=236 Identities=15% Similarity=0.074 Sum_probs=141.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccc------cccchhhh---HHHHhCCcEEEEECCCCC-CCC
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW------INTVDMRA---QYLRSKGILVWKLDNRGT-ARR 397 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~------~~~~~~~~---~~l~~~G~~v~~~d~rG~-~~~ 397 (571)
+|..+.+..+...+. ...|.||++||.+++......+ ...|...+ ..+...+|.|+++|++|+ +++
T Consensus 31 ~~~~~~y~~~G~~~~----~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s 106 (379)
T PRK00175 31 PPVELAYETYGTLNA----DRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGS 106 (379)
T ss_pred CCceEEEEeccccCC----CCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCC
Confidence 344555555543211 2248899999987765311000 00122221 133367999999999984 333
Q ss_pred -hhhhHH----HHh-ccCCCCCchhHHHHHHHHHHcCCCcCCc-EEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 398 -GLKFEA----SIK-HNCGRIDAEDQLTGAEWLIKQGLAKVGH-IGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 398 -~~~~~~----~~~-~~~~~~~~~D~~~~~~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
+..... ..+ .......++|+.+.+..+++.- ..++ +.++||||||.+++.++.++|++++++|+.++....
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (379)
T PRK00175 107 TGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL--GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARL 184 (379)
T ss_pred CCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh--CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCccc
Confidence 211000 000 0111234666666666666543 3456 589999999999999999999999998887754321
Q ss_pred ccccc--------------h---------------------------h------hhhhcCC-----C--C----CChhhh
Q 008274 471 DGYDT--------------F---------------------------Y------TEKYMGL-----P--S----EDPVGY 492 (571)
Q Consensus 471 ~~~~~--------------~---------------------------~------~~~~~g~-----~--~----~~~~~~ 492 (571)
..... . + ...+... + . ...+.+
T Consensus 185 ~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 264 (379)
T PRK00175 185 SAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESY 264 (379)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHH
Confidence 10000 0 0 0000000 0 0 000000
Q ss_pred ---------ccCC-----------------------cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeE
Q 008274 493 ---------EYSS-----------------------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI 540 (571)
Q Consensus 493 ---------~~~s-----------------------~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 540 (571)
...+ ....+.+|++|+|+++|++|..+|++.++.+.+.+...+..+++
T Consensus 265 l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l 344 (379)
T PRK00175 265 LRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSY 344 (379)
T ss_pred HHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEE
Confidence 0000 12335678899999999999999999999999999877777788
Q ss_pred EEcC-CCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 541 LIFP-DERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 541 ~~~~-~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++++ ++||.. ..+..+.+.+.+.+||.+.
T Consensus 345 ~~i~~~~GH~~-~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 345 AEIDSPYGHDA-FLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred EEeCCCCCchh-HhcCHHHHHHHHHHHHHhh
Confidence 8775 999987 4467778999999999764
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.6e-14 Score=133.29 Aligned_cols=239 Identities=16% Similarity=0.097 Sum_probs=158.9
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCC--CCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCC
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRY--GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG 393 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~--~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG 393 (571)
....++..++.+||-.+...++.+..... ++...|+||++||-.+++. + .....++..+.++||.|+.+|.||
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~--~---~YVr~lv~~a~~~G~r~VVfN~RG 164 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSH--E---SYVRHLVHEAQRKGYRVVVFNHRG 164 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCCh--h---HHHHHHHHHHHhCCcEEEEECCCC
Confidence 44567788888899888888886655321 1245699999999766644 1 233455677778999999999999
Q ss_pred CCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC---CeeEEEEEcCccCCc
Q 008274 394 TARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPVTSW 470 (571)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~---~~~~~~v~~~~~~~~ 470 (571)
.+++.-. ..+-+.....+|+.++++++.++. ...++..+|.||||.+...++.+.. .+.+|++..+|+--.
T Consensus 165 ~~g~~Lt----Tpr~f~ag~t~Dl~~~v~~i~~~~--P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~ 238 (409)
T KOG1838|consen 165 LGGSKLT----TPRLFTAGWTEDLREVVNHIKKRY--PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLL 238 (409)
T ss_pred CCCCccC----CCceeecCCHHHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhh
Confidence 7765311 111222234789999999999874 3458999999999999999998743 345555555554311
Q ss_pred --------cc----ccc--------------------------------------hhhhhhcCCCCCChhhhccCCcchh
Q 008274 471 --------DG----YDT--------------------------------------FYTEKYMGLPSEDPVGYEYSSVMHH 500 (571)
Q Consensus 471 --------~~----~~~--------------------------------------~~~~~~~g~~~~~~~~~~~~s~~~~ 500 (571)
.. |+. .+....+|.+. ..+.|.+.|+...
T Consensus 239 ~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~-~deYY~~aSs~~~ 317 (409)
T KOG1838|consen 239 AASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS-VDEYYKKASSSNY 317 (409)
T ss_pred hhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc-HHHHHhhcchhhh
Confidence 00 000 00001112221 3466888999999
Q ss_pred hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC-CC--CCcHHHHHHH-HHHHHHH
Q 008274 501 VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP-RR--HRDRIYMEER-IWEFIER 569 (571)
Q Consensus 501 ~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~-~~--~~~~~~~~~~-i~~fl~~ 569 (571)
+++|+.|+|+|++.+|+++|.. +.-. ....++.++-+++-.-+||-- .. ..+...+.++ +.+|+.+
T Consensus 318 v~~I~VP~L~ina~DDPv~p~~-~ip~--~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 318 VDKIKVPLLCINAADDPVVPEE-AIPI--DDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred cccccccEEEEecCCCCCCCcc-cCCH--HHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHH
Confidence 9999999999999999999874 2111 122335788888888889953 11 1144555555 8888765
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.2e-15 Score=131.06 Aligned_cols=181 Identities=18% Similarity=0.115 Sum_probs=122.5
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCc-eEEEEEcCCCCceeeccc-ccccchhhhHHHHhCCcEEEEECCCC-CCCChhhhHH
Q 008274 327 NDGTVLYGALYKPDESRYGPPPY-KTLISVYGGPCVQLVCDS-WINTVDMRAQYLRSKGILVWKLDNRG-TARRGLKFEA 403 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~-P~vv~~hGg~~~~~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~rG-~~~~~~~~~~ 403 (571)
.-|.+|.+.+|.|++.. +++++ |+|+|+||++........ -....-..+...-+-+|-|++|.|-- ...+..
T Consensus 169 ~tgneLkYrly~Pkdy~-pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~---- 243 (387)
T COG4099 169 STGNELKYRLYTPKDYA-PDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE---- 243 (387)
T ss_pred ccCceeeEEEecccccC-CCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc----
Confidence 35788999999998874 44666 999999997554321100 00000000111113345566665321 011110
Q ss_pred HHhccCCCCCchhHHHHHH-HHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhc
Q 008274 404 SIKHNCGRIDAEDQLTGAE-WLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYM 482 (571)
Q Consensus 404 ~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 482 (571)
.........+.+++ -+.+++.||.+||-++|.|+||+++..++.++|+.|+|++.++|--+.
T Consensus 244 -----~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------------ 306 (387)
T COG4099 244 -----KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------------ 306 (387)
T ss_pred -----ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch------------
Confidence 00111333455555 677788999999999999999999999999999999999998875321
Q ss_pred CCCCCChhhhccCCcchhhccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcC
Q 008274 483 GLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544 (571)
Q Consensus 483 g~~~~~~~~~~~~s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 544 (571)
..+++.++ .|+.++|+.+|.++|.+++.-+++.|+..+.++.+..|.
T Consensus 307 ---------------v~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 307 ---------------VYLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred ---------------hhhhhhhccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 12344444 699999999999999999999999999988888777766
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5e-14 Score=139.81 Aligned_cols=215 Identities=12% Similarity=0.076 Sum_probs=134.6
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.++..+.+....+ ...|.||++||.+.+.. .|...+..|++ +|.|+++|+||+|.+......
T Consensus 112 ~~~~~~~y~~~G~-------~~~~~ivllHG~~~~~~-------~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~--- 173 (383)
T PLN03084 112 SDLFRWFCVESGS-------NNNPPVLLIHGFPSQAY-------SYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPG--- 173 (383)
T ss_pred CCceEEEEEecCC-------CCCCeEEEECCCCCCHH-------HHHHHHHHHhc-CCEEEEECCCCCCCCCCCccc---
Confidence 4666665443221 23478899999876543 34455666764 899999999999877532110
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc--cc---chh----
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG--YD---TFY---- 477 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~--~~---~~~---- 477 (571)
......++++.+.+..++++- ..+++.|+|||+||.+++.++.++|++++++|+.++...... .. ..+
T Consensus 174 -~~~~ys~~~~a~~l~~~i~~l--~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l 250 (383)
T PLN03084 174 -YGFNYTLDEYVSSLESLIDEL--KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFL 250 (383)
T ss_pred -ccccCCHHHHHHHHHHHHHHh--CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHH
Confidence 001223455555555554442 345799999999999999999999999999999887642110 00 000
Q ss_pred -h-----------hhhcC--CCC----CChhhhc------------------cC-Ccc----hhh------ccCCCcEEE
Q 008274 478 -T-----------EKYMG--LPS----EDPVGYE------------------YS-SVM----HHV------HKMKGKLLL 510 (571)
Q Consensus 478 -~-----------~~~~g--~~~----~~~~~~~------------------~~-s~~----~~~------~~~~~p~ll 510 (571)
. ...+. .+. +....|. .. ..+ ..+ .+++.|+|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLi 330 (383)
T PLN03084 251 LGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITV 330 (383)
T ss_pred hhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEE
Confidence 0 00000 000 0000000 00 000 001 246889999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 511 VHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 511 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
++|+.|..++.+..+.+++. .+.++.++|++||.+ ..+..+.+.+.|.+||.
T Consensus 331 I~G~~D~~v~~~~~~~~a~~-----~~a~l~vIp~aGH~~-~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 331 CWGLRDRWLNYDGVEDFCKS-----SQHKLIELPMAGHHV-QEDCGEELGGIISGILS 382 (383)
T ss_pred EeeCCCCCcCHHHHHHHHHh-----cCCeEEEECCCCCCc-chhCHHHHHHHHHHHhh
Confidence 99999999998877666653 256889999999987 55788899999999986
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-13 Score=128.53 Aligned_cols=220 Identities=16% Similarity=0.199 Sum_probs=134.0
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
++..+...-..+.. +..+-+|++||-+.+.. .|.. ....|++ ...|.++|.+|.|.+.+..-..
T Consensus 74 ~~~~iw~~~~~~~~-----~~~~plVliHGyGAg~g---~f~~----Nf~~La~-~~~vyaiDllG~G~SSRP~F~~--- 137 (365)
T KOG4409|consen 74 NGIEIWTITVSNES-----ANKTPLVLIHGYGAGLG---LFFR----NFDDLAK-IRNVYAIDLLGFGRSSRPKFSI--- 137 (365)
T ss_pred CCceeEEEeecccc-----cCCCcEEEEeccchhHH---HHHH----hhhhhhh-cCceEEecccCCCCCCCCCCCC---
Confidence 44445444444443 33445566899555433 2322 2345555 8999999999999876432111
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc---------c------
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD---------G------ 472 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~---------~------ 472 (571)
+ .......+++.++.....- ...++.|+|||+|||++..+|.+||++++.+|+.+|..--. .
T Consensus 138 d-~~~~e~~fvesiE~WR~~~--~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~ 214 (365)
T KOG4409|consen 138 D-PTTAEKEFVESIEQWRKKM--GLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWY 214 (365)
T ss_pred C-cccchHHHHHHHHHHHHHc--CCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHH
Confidence 1 1111223444444333322 34689999999999999999999999999999998853100 0
Q ss_pred ---------ccchhhhhhcC-----------------CCCCCh----------------------------hhhccCCcc
Q 008274 473 ---------YDTFYTEKYMG-----------------LPSEDP----------------------------VGYEYSSVM 498 (571)
Q Consensus 473 ---------~~~~~~~~~~g-----------------~~~~~~----------------------------~~~~~~s~~ 498 (571)
+.+...-|.+| .|.... -.+++...+
T Consensus 215 ~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~ 294 (365)
T KOG4409|consen 215 KALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMI 294 (365)
T ss_pred hhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHH
Confidence 00000001111 110000 011222233
Q ss_pred hhhccCC--CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 499 HHVHKMK--GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 499 ~~~~~~~--~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+.+..++ +|+++|+|+.|.+ ....+..+...+ ....++.+++|++||.. ..++.+.+.+.+.+++++.
T Consensus 295 ~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~--~~~~~~~~~v~~aGHhv-ylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 295 QRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSL--MKEYVEIIIVPGAGHHV-YLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHHHhhccCCCEEEEecCcccc-cchhHHHHHHHh--hcccceEEEecCCCcee-ecCCHHHHHHHHHHHHhcc
Confidence 4455566 8999999999875 455666666655 34568999999999987 4578889999999988763
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.7e-14 Score=128.77 Aligned_cols=157 Identities=25% Similarity=0.343 Sum_probs=97.1
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC-cccc---c------chhhh---h
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS-WDGY---D------TFYTE---K 480 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~-~~~~---~------~~~~~---~ 480 (571)
++-+.++++||.+++.++.++|+|+|.|.||-+|+.+++.+| .++++|+.+|..- +... . ..... .
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISK 81 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhh
Confidence 455789999999999999999999999999999999999998 6799998877432 1100 0 00000 0
Q ss_pred h-c---CCCC-----CChhhhccCCcchhhccCCCcEEEEecCCCCCCChH-HHHHHHHHHHHcCCC--eeEEEcCCCCC
Q 008274 481 Y-M---GLPS-----EDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFR-HTARLINALVAARKP--YEILIFPDERH 548 (571)
Q Consensus 481 ~-~---g~~~-----~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~-~~~~~~~~l~~~~~~--~~~~~~~~~~H 548 (571)
. . +... .....-......-.++++++|+|+++|++|...|-. .+..+.++|++++.+ ++++.||++||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH 161 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGH 161 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S
T ss_pred ceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCc
Confidence 0 0 0000 000000011112347888999999999999999854 566777889888854 88899999999
Q ss_pred CCCCC---------------------------CcHHHHHHHHHHHHHHhC
Q 008274 549 MPRRH---------------------------RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 549 ~~~~~---------------------------~~~~~~~~~i~~fl~~~l 571 (571)
.+..+ ...++.++++++||+++|
T Consensus 162 ~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L 211 (213)
T PF08840_consen 162 LIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHL 211 (213)
T ss_dssp ---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH-
T ss_pred eecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHh
Confidence 86321 145778999999999987
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.7e-13 Score=128.13 Aligned_cols=200 Identities=14% Similarity=0.094 Sum_probs=121.6
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|.||++||...+.. .|..+...|.+.||.|+++|+||+|.+..... ....+++..+.+..+++.
T Consensus 17 ~~p~vvliHG~~~~~~-------~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-------~~~~~~~~~~~l~~~i~~ 82 (273)
T PLN02211 17 QPPHFVLIHGISGGSW-------CWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-------SVTTFDEYNKPLIDFLSS 82 (273)
T ss_pred CCCeEEEECCCCCCcC-------cHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-------cCCCHHHHHHHHHHHHHh
Confidence 4588999999766532 35556788888999999999999986431100 012244444444433333
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc--hhhh------h---h----cC---------
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT--FYTE------K---Y----MG--------- 483 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~------~---~----~g--------- 483 (571)
-. ..+++.++||||||.+++.++.++|++++++|..++......+.. .+.. . . .+
T Consensus 83 l~-~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
T PLN02211 83 LP-ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTS 161 (273)
T ss_pred cC-CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCce
Confidence 11 246899999999999999999999999999888765432100000 0000 0 0 00
Q ss_pred ---------------CCCCChh---hhcc---CCcc------hhhccC-CCcEEEEecCCCCCCChHHHHHHHHHHHHcC
Q 008274 484 ---------------LPSEDPV---GYEY---SSVM------HHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAAR 535 (571)
Q Consensus 484 ---------------~~~~~~~---~~~~---~s~~------~~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~ 535 (571)
.+..... .... ...+ ....++ +.|+++|.|++|..+|++..+.|.+.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~--- 238 (273)
T PLN02211 162 AIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP--- 238 (273)
T ss_pred eeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC---
Confidence 0000000 0000 0001 112234 5799999999999999998888887652
Q ss_pred CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 536 KPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 536 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
..+++.++ +||.. ..+....+.+.|.+...
T Consensus 239 -~~~~~~l~-~gH~p-~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 239 -PSQVYELE-SDHSP-FFSTPFLLFGLLIKAAA 268 (273)
T ss_pred -ccEEEEEC-CCCCc-cccCHHHHHHHHHHHHH
Confidence 23677776 79986 34666666666666543
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.4e-13 Score=128.94 Aligned_cols=204 Identities=19% Similarity=0.227 Sum_probs=130.5
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
+..|.||++||...+.. .| +.....|.+ .|+.|+++|.+|.|.++..-.. ....+.+....+..+.
T Consensus 56 ~~~~pvlllHGF~~~~~---~w----~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~------~~y~~~~~v~~i~~~~ 122 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSF---SW----RRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRG------PLYTLRELVELIRRFV 122 (326)
T ss_pred CCCCcEEEeccccCCcc---cH----hhhccccccccceEEEEEecCCCCcCCCCCCC------CceehhHHHHHHHHHH
Confidence 35678888999655432 33 334444543 3799999999997643321111 1133556666665555
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEE---EcCccCCccccc---------------------------c
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAV---SGAPVTSWDGYD---------------------------T 475 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v---~~~~~~~~~~~~---------------------------~ 475 (571)
.+.. ..++.++|||+||.++..+|+.+|+.++..+ ...+........ .
T Consensus 123 ~~~~--~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 200 (326)
T KOG1454|consen 123 KEVF--VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVR 200 (326)
T ss_pred Hhhc--CcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchh
Confidence 5432 3459999999999999999999999999988 444332110000 0
Q ss_pred hhhhhhc------C-CCC---C--------------Chh----hh---cc--CCcchhhccCC-CcEEEEecCCCCCCCh
Q 008274 476 FYTEKYM------G-LPS---E--------------DPV----GY---EY--SSVMHHVHKMK-GKLLLVHGMIDENVHF 521 (571)
Q Consensus 476 ~~~~~~~------g-~~~---~--------------~~~----~~---~~--~s~~~~~~~~~-~p~lli~G~~D~~v~~ 521 (571)
.+.+... . .+. + ..+ .+ .. ......+.++. +|+|+++|++|..+|.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~ 280 (326)
T KOG1454|consen 201 LVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPL 280 (326)
T ss_pred heeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCH
Confidence 0000000 0 000 0 000 00 00 23334566676 8999999999999999
Q ss_pred HHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 522 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+.+..+.+.+ .++++.+++++||... .+..+.+.+.|..|+.++
T Consensus 281 ~~~~~~~~~~----pn~~~~~I~~~gH~~h-~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 281 ELAEELKKKL----PNAELVEIPGAGHLPH-LERPEEVAALLRSFIARL 324 (326)
T ss_pred HHHHHHHhhC----CCceEEEeCCCCcccc-cCCHHHHHHHHHHHHHHh
Confidence 9777766554 7789999999999984 488999999999999875
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-11 Score=127.10 Aligned_cols=191 Identities=19% Similarity=0.162 Sum_probs=135.2
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
...|+++|.++++.+.+.. .......+.|||||+.+++...+. +...|+++|+++|+.+.+.......
T Consensus 169 ~~~l~~~d~~g~~~~~l~~---------~~~~~~~p~~Spdg~~la~~~~~~-~~~~i~v~d~~~g~~~~~~~~~~~~-- 236 (417)
T TIGR02800 169 RYELQVADYDGANPQTITR---------SREPILSPAWSPDGQKLAYVSFES-GKPEIYVQDLATGQREKVASFPGMN-- 236 (417)
T ss_pred cceEEEEcCCCCCCEEeec---------CCCceecccCCCCCCEEEEEEcCC-CCcEEEEEECCCCCEEEeecCCCCc--
Confidence 4579999998887777743 334566789999999999887554 3467999999999877765432110
Q ss_pred eccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 159 NLHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
+.+ .|++|+ +++.+..+|..+||++++.+++.++|+........+ .|++||++|+|.+++.+. .+
T Consensus 237 -----~~~-----~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~-~~s~dg~~l~~~s~~~g~--~~ 303 (417)
T TIGR02800 237 -----GAP-----AFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEP-SWSPDGKSIAFTSDRGGS--PQ 303 (417)
T ss_pred -----cce-----EECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCE-EECCCCCEEEEEECCCCC--ce
Confidence 111 344554 777777778889999999988888888754333333 599999999999987664 68
Q ss_pred EEEEEeCCCCCCCCCCCeEecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
||.+++ .+. ..++++... ....+.+||||+++++..... ....++++++.++. .+.+.
T Consensus 304 iy~~d~--~~~----~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~-~~~~i~~~d~~~~~-~~~l~ 362 (417)
T TIGR02800 304 IYMMDA--DGG----EVRRLTFRGGYNASPSWSPDGDLIAFVHREG-GGFNIAVMDLDGGG-ERVLT 362 (417)
T ss_pred EEEEEC--CCC----CEEEeecCCCCccCeEECCCCCEEEEEEccC-CceEEEEEeCCCCC-eEEcc
Confidence 999998 443 455666433 334568999999999876543 33578999986644 34444
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.7e-13 Score=115.46 Aligned_cols=170 Identities=18% Similarity=0.193 Sum_probs=128.0
Q ss_pred chhhhHHHHhCCcEEEEECCC-C---CCC-ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHH
Q 008274 372 VDMRAQYLRSKGILVWKLDNR-G---TAR-RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYL 446 (571)
Q Consensus 372 ~~~~~~~l~~~G~~v~~~d~r-G---~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~ 446 (571)
.+..+..++..||.|+.||+- | +.. .-.+......+.......+|+...+++|+.++ +..+|+++|.++||-+
T Consensus 56 ~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~ 133 (242)
T KOG3043|consen 56 TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKV 133 (242)
T ss_pred HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecceE
Confidence 345688889999999999974 4 111 11122233334444556789999999999776 6789999999999999
Q ss_pred HHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHH
Q 008274 447 SAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTAR 526 (571)
Q Consensus 447 a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~ 526 (571)
+..+....| .|.++++..|..- + ...+.++++|+|++.|+.|..+|+....+
T Consensus 134 vv~~~~~~~-~f~a~v~~hps~~--------------------------d-~~D~~~vk~Pilfl~ae~D~~~p~~~v~~ 185 (242)
T KOG3043|consen 134 VVTLSAKDP-EFDAGVSFHPSFV--------------------------D-SADIANVKAPILFLFAELDEDVPPKDVKA 185 (242)
T ss_pred EEEeeccch-hheeeeEecCCcC--------------------------C-hhHHhcCCCCEEEEeecccccCCHHHHHH
Confidence 998888766 7788887655321 0 23467888999999999999999999988
Q ss_pred HHHHHHHcCC-CeeEEEcCCCCCCCCC-------C---CcHHHHHHHHHHHHHHhC
Q 008274 527 LINALVAARK-PYEILIFPDERHMPRR-------H---RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 527 ~~~~l~~~~~-~~~~~~~~~~~H~~~~-------~---~~~~~~~~~i~~fl~~~l 571 (571)
+-++|..... ..++.+|++.+|++.. + ...+..++.+++||++++
T Consensus 186 ~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 186 WEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred HHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 8888877643 4578999999999842 1 234667888999999875
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.1e-12 Score=130.66 Aligned_cols=233 Identities=15% Similarity=0.145 Sum_probs=145.2
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccccc-----cc-chh---hhHHHHhCCcEEEEECCCCCCCC---
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWI-----NT-VDM---RAQYLRSKGILVWKLDNRGTARR--- 397 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~-----~~-~~~---~~~~l~~~G~~v~~~d~rG~~~~--- 397 (571)
.+|.+..|-..+. .+-++||++|+-.++......+. .. |.. ....+--.-|-||++|..|++.+
T Consensus 41 ~~~~Y~t~G~ln~----~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 41 VQMGYETYGTLNR----AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred ceEEEEeccccCC----CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 4566666665442 34589999999766543211110 01 110 12233345699999999987531
Q ss_pred -----hhhhHHHHh-----ccCCCCCchhHHHHHHHHHHcCCCcCCcEE-EEeechHHHHHHHHHhcCCCeeEEEEEcCc
Q 008274 398 -----GLKFEASIK-----HNCGRIDAEDQLTGAEWLIKQGLAKVGHIG-LYGWSYGGYLSAITLARFPDVFQCAVSGAP 466 (571)
Q Consensus 398 -----~~~~~~~~~-----~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~-l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~ 466 (571)
|..-.+... .+.....+.|+.+.+..++++- .-+++. ++||||||.+++.++.++|++++.+|.++.
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l--gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL--GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred CCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEec
Confidence 111100100 0233356788888887777653 345675 999999999999999999999999888754
Q ss_pred cCC---cc--cc----------c--------------------------------chhhhhhcCC------CC------C
Q 008274 467 VTS---WD--GY----------D--------------------------------TFYTEKYMGL------PS------E 487 (571)
Q Consensus 467 ~~~---~~--~~----------~--------------------------------~~~~~~~~g~------~~------~ 487 (571)
... +. .+ + .++.+++... +. .
T Consensus 195 ~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~ 274 (389)
T PRK06765 195 NPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLT 274 (389)
T ss_pred CCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchh
Confidence 211 10 00 0 0000010000 00 0
Q ss_pred Chhhhcc---------C----------------------CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCC
Q 008274 488 DPVGYEY---------S----------------------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARK 536 (571)
Q Consensus 488 ~~~~~~~---------~----------------------s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~ 536 (571)
..+.|.. . +....+.++++|+|+++|+.|..+|++.++.+.+.+...+.
T Consensus 275 ~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~ 354 (389)
T PRK06765 275 SFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGK 354 (389)
T ss_pred hHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCC
Confidence 0011100 0 22334567889999999999999999999999998876667
Q ss_pred CeeEEEcCC-CCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 537 PYEILIFPD-ERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 537 ~~~~~~~~~-~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+++++++++ +||.. ..+....+.+.+.+||++
T Consensus 355 ~a~l~~I~s~~GH~~-~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 355 YAEVYEIESINGHMA-GVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CeEEEEECCCCCcch-hhcCHHHHHHHHHHHHcc
Confidence 899999986 89986 446788899999999975
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-12 Score=118.80 Aligned_cols=232 Identities=15% Similarity=0.080 Sum_probs=141.4
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCC-CCCCC
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR-GTARR 397 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r-G~~~~ 397 (571)
.+..+|.. .+...++++|.|...+ ++.|+||.+||+.++........ .| -......||.|+.||.- ++-.-
T Consensus 35 ~~~~s~~~-~g~~r~y~l~vP~g~~---~~apLvv~LHG~~~sgag~~~~s-g~---d~lAd~~gFlV~yPdg~~~~wn~ 106 (312)
T COG3509 35 SSVASFDV-NGLKRSYRLYVPPGLP---SGAPLVVVLHGSGGSGAGQLHGT-GW---DALADREGFLVAYPDGYDRAWNA 106 (312)
T ss_pred CCcccccc-CCCccceEEEcCCCCC---CCCCEEEEEecCCCChHHhhccc-ch---hhhhcccCcEEECcCccccccCC
Confidence 34445554 5677899999999863 34499999999877655333322 22 23444689999999632 22101
Q ss_pred hhhhHH--HHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc-c-
Q 008274 398 GLKFEA--SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG-Y- 473 (571)
Q Consensus 398 ~~~~~~--~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~-~- 473 (571)
...+.. ......+..++..+.+.+..++.+..||+.||.|.|.|.||.|+.++++.+|++|.++..+++.....- .
T Consensus 107 ~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~~~~a~~ 186 (312)
T COG3509 107 NGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVACT 186 (312)
T ss_pred CcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccCCCcccC
Confidence 111111 112233445566778888888888899999999999999999999999999999999888887652100 0
Q ss_pred --cchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHH------------------
Q 008274 474 --DTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA------------------ 533 (571)
Q Consensus 474 --~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~------------------ 533 (571)
...-..+.-|.+ +|..-...=..| |.+|..|..|...+..+....+..
T Consensus 187 ~~rp~~~m~~~G~~----------Dp~~p~~gG~~~--~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~~ 254 (312)
T COG3509 187 PPRPVSVMAFHGTA----------DPLNPYHGGGVP--IGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGTD 254 (312)
T ss_pred CCCchhHHHhcCCC----------CCCCCCCCCCcc--cccccccccccHHHHHHHHHHhcCCCCCCcccccCCCcccce
Confidence 000000111211 111111111123 788888887754444443333321
Q ss_pred -----cCCCeeEEEcCCCCCCCCCCCc-----------HHHHHHHHHHHHHHh
Q 008274 534 -----ARKPYEILIFPDERHMPRRHRD-----------RIYMEERIWEFIERT 570 (571)
Q Consensus 534 -----~~~~~~~~~~~~~~H~~~~~~~-----------~~~~~~~i~~fl~~~ 570 (571)
.+..+++..+.+.||.+..... -.+..+.|.+||..+
T Consensus 255 ~~~~~~~~~V~~y~i~g~GH~wp~~~~~~~~~~g~~t~~~dat~~iw~Ff~~~ 307 (312)
T COG3509 255 YDTCDGNARVELYTIDGGGHTWPGGTQYGPAALGMSTRGFDATERIWRFFRQH 307 (312)
T ss_pred eeccCCCcceEEEEEeCCcccCcCCCCCCcccccccccCcchHHHHHHHHHhc
Confidence 1247888899999998732111 233567788888764
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.6e-12 Score=127.51 Aligned_cols=205 Identities=15% Similarity=0.115 Sum_probs=128.4
Q ss_pred CCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCC----cEEEEECC
Q 008274 317 EPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG----ILVWKLDN 391 (571)
Q Consensus 317 ~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~ 391 (571)
...+.+.+.+. -|.+...++|.|+++. ++++|||+++||...... .........|.+.| .+++.+|.
T Consensus 178 g~~~~~~~~S~~Lg~~r~v~VY~P~~y~--~~~~PvlyllDG~~w~~~------~~~~~~ld~li~~g~i~P~ivV~id~ 249 (411)
T PRK10439 178 SPAKEIIWKSERLGNSRRVWIYTTGDAA--PEERPLAILLDGQFWAES------MPVWPALDSLTHRGQLPPAVYLLIDA 249 (411)
T ss_pred CceEEEEEEccccCCceEEEEEECCCCC--CCCCCEEEEEECHHhhhc------CCHHHHHHHHHHcCCCCceEEEEECC
Confidence 34455666653 4677889999998763 468999999999654322 11222355666666 45788886
Q ss_pred CCCCCChhhhHHHHhccCCCCCchhH-HHHHHHHHHcC--CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 392 RGTARRGLKFEASIKHNCGRIDAEDQ-LTGAEWLIKQG--LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 392 rG~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
........+... ... ..+.+ .+.+-++.++. ..|+++.+|+|+||||+.|+.++.++|++|.++++.+|..
T Consensus 250 ~~~~~R~~el~~--~~~----f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 250 IDTTHRSQELPC--NAD----FWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred CCcccccccCCc--hHH----HHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 432212111100 000 01122 23334444442 2478899999999999999999999999999999999864
Q ss_pred CcccccchhhhhhcCCCCCChhhhccCCcchh--hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCC
Q 008274 469 SWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHH--VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE 546 (571)
Q Consensus 469 ~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~--~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 546 (571)
-|.... + .....+.+ .+.. ...-..+++|-+|+.|... ...+.++.+.|+++|.++++.++++
T Consensus 324 ww~~~~--------~---~~~~~l~~--~l~~~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G- 388 (411)
T PRK10439 324 WWPHRG--------G---QQEGVLLE--QLKAGEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG- 388 (411)
T ss_pred ecCCcc--------C---CchhHHHH--HHHhcccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-
Confidence 332100 0 00000100 0000 1111236888899988644 5678999999999999999999998
Q ss_pred CCCC
Q 008274 547 RHMP 550 (571)
Q Consensus 547 ~H~~ 550 (571)
||..
T Consensus 389 GHd~ 392 (411)
T PRK10439 389 GHDA 392 (411)
T ss_pred CcCH
Confidence 7975
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.2e-13 Score=112.90 Aligned_cols=212 Identities=17% Similarity=0.169 Sum_probs=139.4
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+.+.++...+..+.+.+..- +..-++|++||.-.... ...+...+..+++.||.++.+|++|.|.+
T Consensus 9 ~~~~ivi~n~~ne~lvg~lh~t-------gs~e~vvlcHGfrS~Kn-----~~~~~~vA~~~e~~gis~fRfDF~GnGeS 76 (269)
T KOG4667|consen 9 IAQKIVIPNSRNEKLVGLLHET-------GSTEIVVLCHGFRSHKN-----AIIMKNVAKALEKEGISAFRFDFSGNGES 76 (269)
T ss_pred eeeEEEeccCCCchhhcceecc-------CCceEEEEeeccccccc-----hHHHHHHHHHHHhcCceEEEEEecCCCCc
Confidence 4556777777776666644332 34468999999544322 11245568888899999999999999988
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc----
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY---- 473 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~---- 473 (571)
...|..-. +...++|+...++++... +.---+|+|||-||.+++..+.++++ +.-++..+|-.+....
T Consensus 77 ~gsf~~Gn----~~~eadDL~sV~q~~s~~---nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eR 148 (269)
T KOG4667|consen 77 EGSFYYGN----YNTEADDLHSVIQYFSNS---NRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINER 148 (269)
T ss_pred CCccccCc----ccchHHHHHHHHHHhccC---ceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhh
Confidence 76654322 233468999999998663 22234689999999999999999887 4566777765554321
Q ss_pred -cchhhhhhc--CC---CC---CChhhhccCCcc--------hhhccC--CCcEEEEecCCCCCCChHHHHHHHHHHHHc
Q 008274 474 -DTFYTEKYM--GL---PS---EDPVGYEYSSVM--------HHVHKM--KGKLLLVHGMIDENVHFRHTARLINALVAA 534 (571)
Q Consensus 474 -~~~~~~~~~--g~---~~---~~~~~~~~~s~~--------~~~~~~--~~p~lli~G~~D~~v~~~~~~~~~~~l~~~ 534 (571)
...+.++.+ |. +. .-...+...|.. ....+| +||+|-+||..|.+||.+.+.++++.+.
T Consensus 149 lg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~-- 226 (269)
T KOG4667|consen 149 LGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP-- 226 (269)
T ss_pred hcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc--
Confidence 111222211 11 11 001111111111 112223 5899999999999999999999999873
Q ss_pred CCCeeEEEcCCCCCCCCCC
Q 008274 535 RKPYEILIFPDERHMPRRH 553 (571)
Q Consensus 535 ~~~~~~~~~~~~~H~~~~~ 553 (571)
+.++.++|++.|.+...
T Consensus 227 --nH~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 227 --NHKLEIIEGADHNYTGH 243 (269)
T ss_pred --CCceEEecCCCcCccch
Confidence 37889999999998543
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.4e-12 Score=149.97 Aligned_cols=211 Identities=16% Similarity=0.147 Sum_probs=131.2
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|.||++||.+++.. . |...+..|.+ +|.|+++|+||+|.+................++++.+.+..++++
T Consensus 1370 ~~~~vVllHG~~~s~~---~----w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~ 1441 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE---D----WIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH 1441 (1655)
T ss_pred CCCeEEEECCCCCCHH---H----HHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHH
Confidence 3478999999877643 2 3445566654 699999999999876532110000000112345555555544443
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc----------c---c--------hhhhhhcCC--
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY----------D---T--------FYTEKYMGL-- 484 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~----------~---~--------~~~~~~~g~-- 484 (571)
- ..+++.|+||||||.+++.++.++|++++++++.++...+... . . .+...++..
T Consensus 1442 l--~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 1519 (1655)
T PLN02980 1442 I--TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGEL 1519 (1655)
T ss_pred h--CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHH
Confidence 2 4568999999999999999999999999998887654221100 0 0 000000000
Q ss_pred ---CCC---------------Chhh----hc------cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC-
Q 008274 485 ---PSE---------------DPVG----YE------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR- 535 (571)
Q Consensus 485 ---~~~---------------~~~~----~~------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~- 535 (571)
... +... +. ..+....+.++++|+|+++|++|..++ ..+.++.+.+.+..
T Consensus 1520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~ 1598 (1655)
T PLN02980 1520 WKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKE 1598 (1655)
T ss_pred hhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccccc
Confidence 000 0000 00 011123467788999999999999774 66667776664321
Q ss_pred -------CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 536 -------KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 536 -------~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
..++++++|++||.. ..++...+.+.+.+||.+.
T Consensus 1599 ~~~~~~~~~a~lvvI~~aGH~~-~lE~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1599 SGNDKGKEIIEIVEIPNCGHAV-HLENPLPVIRALRKFLTRL 1639 (1655)
T ss_pred ccccccccceEEEEECCCCCch-HHHCHHHHHHHHHHHHHhc
Confidence 136899999999987 4577888999999999763
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.4e-12 Score=126.08 Aligned_cols=216 Identities=21% Similarity=0.286 Sum_probs=148.1
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhh---HHHHhCCcEEEEECCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRA---QYLRSKGILVWKLDNRG 393 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~---~~l~~~G~~v~~~d~rG 393 (571)
...+.+.++..||.+|...+|.|++. ++.|+++..+-.|....... +..... .. ..++.+||+||..|.||
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~----g~~Pvll~~~~~Py~k~~~~-~~~~~~-~~p~~~~~aa~GYavV~qDvRG 90 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGA----GPLPVLLSRTRLPYRKRNGT-FGPQLS-ALPQPAWFAAQGYAVVNQDVRG 90 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCC----CCCceeEEeecccccccccc-Ccchhh-cccccceeecCceEEEEecccc
Confidence 35567899999999999999999874 68999998884444332101 111111 12 26889999999999999
Q ss_pred CCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc-
Q 008274 394 TARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG- 472 (571)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~- 472 (571)
.++|.+.+..... .+.+|-.+.|+|+.++++.+ .+|+++|.||+|+..+++|+.+|.-.+|++...+..|...
T Consensus 91 ~~~SeG~~~~~~~-----~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~d 164 (563)
T COG2936 91 RGGSEGVFDPESS-----REAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYRD 164 (563)
T ss_pred cccCCcccceecc-----ccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeecccccccccccc
Confidence 9999877754433 25899999999999999855 6899999999999999999998888899998887765210
Q ss_pred -----------ccchhh-----------------------------------hhhcCCCCC--------Ch-hhhccCCc
Q 008274 473 -----------YDTFYT-----------------------------------EKYMGLPSE--------DP-VGYEYSSV 497 (571)
Q Consensus 473 -----------~~~~~~-----------------------------------~~~~g~~~~--------~~-~~~~~~s~ 497 (571)
+...|. +...+.|+. .. ..|.+.+-
T Consensus 165 ~~~~~G~~~~~~~~~W~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~~~~~~hp~~ddfW~~~~~ 244 (563)
T COG2936 165 DAFYGGGAELNFNLGWALTMLAPQPLTRIRPARLDRLAPLRVGAERWRDAPTELLEGEPYFLELWLEHPLRDDFWRRGDR 244 (563)
T ss_pred ccccCcchhhhhhHHHHhhhcccCcccccccccccccchhhhhhccccccccchhccCcccchhhhcCCCccchhhccCc
Confidence 000000 000011111 00 12333455
Q ss_pred chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 498 MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 498 ~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
.....+++.|+|.+.|=.|...+ .+.+++..++.+ +..+++=|- .|.
T Consensus 245 ~~d~~~i~vP~L~i~gW~D~~l~--~~~~~~~~~~~r--~~~lvvgPw-~H~ 291 (563)
T COG2936 245 VADLSKIKVPALVIGGWSDGYLH--TAIKLFAFLRSR--PVKLVVGPW-THG 291 (563)
T ss_pred ccccccCCCcEEEEccccccccc--chHHHhhhcccC--CceeEEccc-ccC
Confidence 55678889999999999998544 556666666543 455555554 554
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=99.42 E-value=4e-13 Score=127.62 Aligned_cols=205 Identities=17% Similarity=0.166 Sum_probs=119.4
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCC-CCceeecccccccchhhhHHHHhCC----cEEEEECCCCCCCChhhhHH
Q 008274 329 GTVLYGALYKPDESRYGPPPYKTLISVYGG-PCVQLVCDSWINTVDMRAQYLRSKG----ILVWKLDNRGTARRGLKFEA 403 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~rG~~~~~~~~~~ 403 (571)
|.....++|.|+++ ...+++|||+++||. .... .+ ........+.+.| .++|+++..+.......+..
T Consensus 5 g~~~~~~VylP~~y-~~~~~~PvlylldG~~~~~~----~~--~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~ 77 (251)
T PF00756_consen 5 GRDRRVWVYLPPGY-DPSKPYPVLYLLDGQSGWFR----NG--NAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYL 77 (251)
T ss_dssp TEEEEEEEEECTTG-GTTTTEEEEEEESHTTHHHH----HH--HHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTS
T ss_pred CCeEEEEEEECCCC-CCCCCCEEEEEccCCccccc----cc--hHHHHHHHHHHhCCCCceEEEEEeccccccccccccc
Confidence 56789999999986 455899999999994 1111 11 1111233334443 45566655443311101100
Q ss_pred H------HhccCCCCCchh-H-HHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc
Q 008274 404 S------IKHNCGRIDAED-Q-LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT 475 (571)
Q Consensus 404 ~------~~~~~~~~~~~D-~-~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 475 (571)
. .....+.....+ + .+.+.++.++..+++.+.+|+|+||||+.|+.++.++|+.|.++++.+|..+.. ..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~--~~ 155 (251)
T PF00756_consen 78 PAGSSRRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS--PS 155 (251)
T ss_dssp SBCTTCBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT--HC
T ss_pred ccccccccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc--cc
Confidence 0 000000001122 2 245666666665666669999999999999999999999999999999886543 11
Q ss_pred hhhhhhcCCCCCChhhhccCCcchhhc-----cCCCcEEEEecCCCCCCC----------hHHHHHHHHHHHHcCCCeeE
Q 008274 476 FYTEKYMGLPSEDPVGYEYSSVMHHVH-----KMKGKLLLVHGMIDENVH----------FRHTARLINALVAARKPYEI 540 (571)
Q Consensus 476 ~~~~~~~g~~~~~~~~~~~~s~~~~~~-----~~~~p~lli~G~~D~~v~----------~~~~~~~~~~l~~~~~~~~~ 540 (571)
.|.. .+...|...++..... .-..++++..|+.|.... .....++.+.|...+.+..+
T Consensus 156 ~w~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 228 (251)
T PF00756_consen 156 LWGP-------SDDEAWKENDPFDLIKALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGIPHTY 228 (251)
T ss_dssp HHHH-------STCGHHGGCHHHHHHHHHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEECTTES
T ss_pred ccCc-------CCcHHhhhccHHHHhhhhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCCCceE
Confidence 1211 1223333444443331 123578999999998432 12333444455556788888
Q ss_pred EEcCCCCCCC
Q 008274 541 LIFPDERHMP 550 (571)
Q Consensus 541 ~~~~~~~H~~ 550 (571)
..++ ++|..
T Consensus 229 ~~~~-G~H~~ 237 (251)
T PF00756_consen 229 HVFP-GGHDW 237 (251)
T ss_dssp EEEH-SESSH
T ss_pred EEec-Cccch
Confidence 8888 47764
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.4e-12 Score=135.65 Aligned_cols=216 Identities=15% Similarity=0.055 Sum_probs=120.8
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHH
Q 008274 326 ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI 405 (571)
Q Consensus 326 ~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~ 405 (571)
..+|..+++..+.+. ..|.||++||.+.+.. .|......| ..||.|+++|+||+|.+......
T Consensus 9 ~~~g~~l~~~~~g~~-------~~~~ivllHG~~~~~~-------~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~-- 71 (582)
T PRK05855 9 SSDGVRLAVYEWGDP-------DRPTVVLVHGYPDNHE-------VWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRT-- 71 (582)
T ss_pred eeCCEEEEEEEcCCC-------CCCeEEEEcCCCchHH-------HHHHHHHHh-hcceEEEEecCCCCCCCCCCCcc--
Confidence 347888887765432 2478999999876543 234456666 67899999999999877532110
Q ss_pred hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCcc-CCcc------cc---
Q 008274 406 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPV-TSWD------GY--- 473 (571)
Q Consensus 406 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~-~~~~------~~--- 473 (571)
......++.+.+..+.+.-. ...++.|+||||||.+++.++.+. +.++...+..++. .+.. ..
T Consensus 72 ----~~~~~~~~a~dl~~~i~~l~-~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (582)
T PRK05855 72 ----AAYTLARLADDFAAVIDAVS-PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRP 146 (582)
T ss_pred ----cccCHHHHHHHHHHHHHHhC-CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhccccc
Confidence 01123333333333333211 123499999999999998777652 3333333322211 1000 00
Q ss_pred ------------cc-hh------------------h---hhhc----CCCCCC-------------hhhhcc----CCcc
Q 008274 474 ------------DT-FY------------------T---EKYM----GLPSED-------------PVGYEY----SSVM 498 (571)
Q Consensus 474 ------------~~-~~------------------~---~~~~----g~~~~~-------------~~~~~~----~s~~ 498 (571)
.. .+ . .+.. ..+... ...+.. ....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (582)
T PRK05855 147 TPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSR 226 (582)
T ss_pred chhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhcc
Confidence 00 00 0 0000 000000 000000 0000
Q ss_pred hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 499 HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 499 ~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.....+++|+|+++|++|..+++.....+.+.+ ...++.+++ +||... .+....+.+.+.+|+.+
T Consensus 227 ~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~----~~~~~~~~~-~gH~~~-~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 227 PRERYTDVPVQLIVPTGDPYVRPALYDDLSRWV----PRLWRREIK-AGHWLP-MSHPQVLAAAVAEFVDA 291 (582)
T ss_pred CccCCccCceEEEEeCCCcccCHHHhccccccC----CcceEEEcc-CCCcch-hhChhHHHHHHHHHHHh
Confidence 113347899999999999999988877766543 345666665 689873 56677888999999875
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.2e-12 Score=110.28 Aligned_cols=228 Identities=18% Similarity=0.170 Sum_probs=146.9
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh
Q 008274 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF 401 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~ 401 (571)
..++..||..+.+..|...+ +.+-.+.+-|+.+... ..+..+++.++.+||.|+++||||.+.+...-
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~------~~~g~~~va~a~Gv~~------~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~ 75 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG------KASGRLVVAGATGVGQ------YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPAS 75 (281)
T ss_pred cccccCCCccCccccccCCC------CCCCcEEecccCCcch------hHhHHHHHHhhccCceEEEEecccccCCCccc
Confidence 66788899999999886554 2232344456555422 23566788999999999999999999876544
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEE-EEEc--CccCCcccc-----
Q 008274 402 EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC-AVSG--APVTSWDGY----- 473 (571)
Q Consensus 402 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~-~v~~--~~~~~~~~~----- 473 (571)
.+...-.+.+....|+.++++++.+.- .......+|||+||++...+.. ++ +..+ ++.. ++...|...
T Consensus 76 ~~~~~~~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~gagwsg~m~~~~~l~ 151 (281)
T COG4757 76 LSGSQWRYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSGAGWSGWMGLRERLG 151 (281)
T ss_pred cccCccchhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeeccccc-Cc-ccceeeEeccccccccchhhhhccc
Confidence 443334455556789999999998742 3457889999999998876554 45 3333 2222 222222110
Q ss_pred ---------------cchhhhhhcCCCCCCh----hh---------hccCCc-----chhhccCCCcEEEEecCCCCCCC
Q 008274 474 ---------------DTFYTEKYMGLPSEDP----VG---------YEYSSV-----MHHVHKMKGKLLLVHGMIDENVH 520 (571)
Q Consensus 474 ---------------~~~~~~~~~g~~~~~~----~~---------~~~~s~-----~~~~~~~~~p~lli~G~~D~~v~ 520 (571)
......+++|...+-+ .. |.-.+| ....+.+++|+..+...+|+.+|
T Consensus 152 ~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P 231 (281)
T COG4757 152 AVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAP 231 (281)
T ss_pred ceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCC
Confidence 0111222334332211 01 111122 12346678999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCeeEEEcCCC----CCCCCCCCcHHHHHHHHHHHH
Q 008274 521 FRHTARLINALVAARKPYEILIFPDE----RHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 521 ~~~~~~~~~~l~~~~~~~~~~~~~~~----~H~~~~~~~~~~~~~~i~~fl 567 (571)
+.....+.....+ .+.+++.++.. ||.-...+..+...+++++||
T Consensus 232 ~As~d~f~~~y~n--Apl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 232 PASRDAFASFYRN--APLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHHHhhhc--CcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 9999999887754 46677777765 786544454588888999887
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.6e-11 Score=121.70 Aligned_cols=211 Identities=14% Similarity=0.128 Sum_probs=126.7
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
..+.++. ..+..+.|.|...+ ...+-||++||......+.+- . ..+.++.+|+++||.|+++|+||.|.+..
T Consensus 165 g~VV~~~---~~~eLi~Y~P~t~~---~~~~PlLiVp~~i~k~yilDL-~-p~~Slv~~L~~qGf~V~~iDwrgpg~s~~ 236 (532)
T TIGR01838 165 GAVVFEN---ELFQLIQYEPTTET---VHKTPLLIVPPWINKYYILDL-R-PQNSLVRWLVEQGHTVFVISWRNPDASQA 236 (532)
T ss_pred CeEEEEC---CcEEEEEeCCCCCc---CCCCcEEEECcccccceeeec-c-cchHHHHHHHHCCcEEEEEECCCCCcccc
Confidence 3455544 23555566775421 123445668996444332211 1 11346889999999999999999876543
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHH----HHhcC-CCeeEEEEEcCccCCccccc
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAI----TLARF-PDVFQCAVSGAPVTSWDGYD 474 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~----~~~~~-~~~~~~~v~~~~~~~~~~~~ 474 (571)
.+. +.+...+++.++++++.+.. +..++.++|||+||.++.. +++.+ ++++++++..+...|+....
T Consensus 237 ~~~------~ddY~~~~i~~al~~v~~~~--g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G 308 (532)
T TIGR01838 237 DKT------FDDYIRDGVIAALEVVEAIT--GEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPG 308 (532)
T ss_pred cCC------hhhhHHHHHHHHHHHHHHhc--CCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcc
Confidence 211 11222355778888887643 5678999999999998632 34444 77888888776655532100
Q ss_pred ----------------------------------------ch---hhhhhc-CCCC--CCh-------------------
Q 008274 475 ----------------------------------------TF---YTEKYM-GLPS--EDP------------------- 489 (571)
Q Consensus 475 ----------------------------------------~~---~~~~~~-g~~~--~~~------------------- 489 (571)
.. +...|+ |... .+.
T Consensus 309 ~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~l 388 (532)
T TIGR01838 309 ELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYL 388 (532)
T ss_pred hhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHH
Confidence 00 001111 1110 000
Q ss_pred -hhhccC----------CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 490 -VGYEYS----------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 490 -~~~~~~----------s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
..|.++ .-...+.+|++|+|+++|++|.++|...+..+.+.+ + ..+..+++++||..
T Consensus 389 r~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i---~-~~~~~vL~~sGHi~ 456 (532)
T TIGR01838 389 RNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL---G-GPKTFVLGESGHIA 456 (532)
T ss_pred HHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC---C-CCEEEEECCCCCch
Confidence 011111 112346778899999999999999999888887665 3 45667899999974
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.7e-11 Score=110.58 Aligned_cols=179 Identities=15% Similarity=0.139 Sum_probs=119.5
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGR 411 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~ 411 (571)
.+..++.|... ..|||||++||..- ...| |..+.+.+++.||+||.+|+....+.. ..
T Consensus 4 ~~l~v~~P~~~----g~yPVv~f~~G~~~----~~s~---Ys~ll~hvAShGyIVV~~d~~~~~~~~-----------~~ 61 (259)
T PF12740_consen 4 KPLLVYYPSSA----GTYPVVLFLHGFLL----INSW---YSQLLEHVASHGYIVVAPDLYSIGGPD-----------DT 61 (259)
T ss_pred CCeEEEecCCC----CCcCEEEEeCCcCC----CHHH---HHHHHHHHHhCceEEEEecccccCCCC-----------cc
Confidence 34567888764 68999999999542 2233 566789999999999999966433211 11
Q ss_pred CCchhHHHHHHHHHHc---C-----CCcCCcEEEEeechHHHHHHHHHhcC-----CCeeEEEEEcCccCCcccccchhh
Q 008274 412 IDAEDQLTGAEWLIKQ---G-----LAKVGHIGLYGWSYGGYLSAITLARF-----PDVFQCAVSGAPVTSWDGYDTFYT 478 (571)
Q Consensus 412 ~~~~D~~~~~~~l~~~---~-----~~d~~~i~l~G~S~GG~~a~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~ 478 (571)
.+.+++.+.++|+.+. . .+|-+|++|.|||.||-++..++..+ +.+|++++.+.|+-........
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~-- 139 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQT-- 139 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCC--
Confidence 2356677788887663 1 25889999999999999999999877 5589999999998632111000
Q ss_pred hhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCC---------CCh-HHHHHHHHHHHHcCCCeeEEEcCCCCC
Q 008274 479 EKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDEN---------VHF-RHTARLINALVAARKPYEILIFPDERH 548 (571)
Q Consensus 479 ~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~---------v~~-~~~~~~~~~l~~~~~~~~~~~~~~~~H 548 (571)
.| ..+ ... ...-+...|+|++-..-... .|. .+-.+|++++ ..+....+..+.||
T Consensus 140 -----~P----~v~-~~~--p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~---~~p~~~~v~~~~GH 204 (259)
T PF12740_consen 140 -----EP----PVL-TYT--PQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDEC---KPPSWHFVAKDYGH 204 (259)
T ss_pred -----CC----ccc-cCc--ccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhc---CCCEEEEEeCCCCc
Confidence 00 000 001 11223457999997776642 222 3556676665 56777788899999
Q ss_pred C
Q 008274 549 M 549 (571)
Q Consensus 549 ~ 549 (571)
.
T Consensus 205 ~ 205 (259)
T PF12740_consen 205 M 205 (259)
T ss_pred h
Confidence 6
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.7e-11 Score=121.37 Aligned_cols=189 Identities=17% Similarity=0.182 Sum_probs=101.9
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC------hhhh-HHH------Hh---ccCC
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR------GLKF-EAS------IK---HNCG 410 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~------~~~~-~~~------~~---~~~~ 410 (571)
.++|||||-||..+.+. .+..++..||++||+|+++++|..... ...- ... .. ....
T Consensus 98 ~~~PvvIFSHGlgg~R~-------~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-------SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLR 170 (379)
T ss_dssp S-EEEEEEE--TT--TT-------TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE--
T ss_pred CCCCEEEEeCCCCcchh-------hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccc
Confidence 57999999999877754 456678999999999999999954321 1100 000 00 0000
Q ss_pred C---------------CCchhHHHHHHHHHHc--------------------CCCcCCcEEEEeechHHHHHHHHHhcCC
Q 008274 411 R---------------IDAEDQLTGAEWLIKQ--------------------GLAKVGHIGLYGWSYGGYLSAITLARFP 455 (571)
Q Consensus 411 ~---------------~~~~D~~~~~~~l~~~--------------------~~~d~~~i~l~G~S~GG~~a~~~~~~~~ 455 (571)
. .-..|+..+++.|.+. ..+|.++|+++|||+||..++.++.+.
T Consensus 171 ~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d- 249 (379)
T PF03403_consen 171 DFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD- 249 (379)
T ss_dssp ---GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-
Confidence 0 0144566677776531 235678999999999999999888864
Q ss_pred CeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC
Q 008274 456 DVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR 535 (571)
Q Consensus 456 ~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~ 535 (571)
.+|+++|+..|..- |-.+ ....+++.|+|+|+.+. . ....+...+.+ +....
T Consensus 250 ~r~~~~I~LD~W~~---------------Pl~~----------~~~~~i~~P~L~InSe~-f-~~~~~~~~~~~-~~~~~ 301 (379)
T PF03403_consen 250 TRFKAGILLDPWMF---------------PLGD----------EIYSKIPQPLLFINSES-F-QWWENIFRMKK-VISNN 301 (379)
T ss_dssp TT--EEEEES---T---------------TS-G----------GGGGG--S-EEEEEETT-T---HHHHHHHHT-T--TT
T ss_pred cCcceEEEeCCccc---------------CCCc----------ccccCCCCCEEEEECcc-c-CChhhHHHHHH-HhccC
Confidence 78999999887531 1110 11245778999998874 2 23333333333 33445
Q ss_pred CCeeEEEcCCCCCCC------CCC----------------CcHHHHHHHHHHHHHHhC
Q 008274 536 KPYEILIFPDERHMP------RRH----------------RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 536 ~~~~~~~~~~~~H~~------~~~----------------~~~~~~~~~i~~fl~~~l 571 (571)
....++.+.+..|.- ..+ ...+...+.+++||++||
T Consensus 302 ~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L 359 (379)
T PF03403_consen 302 KESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHL 359 (379)
T ss_dssp S-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhc
Confidence 778899999999961 111 013445677889999874
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.1e-11 Score=112.78 Aligned_cols=189 Identities=16% Similarity=0.125 Sum_probs=129.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEE-Eecc--CccEEEEEEECCCCceEEEEEeecCCe
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQV-LNRS--QTKLKVLKFDIKTGQRKVILVEELDSW 157 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~-~~r~--~~~~~i~~~d~~~g~~~~l~~~~~~~w 157 (571)
.||.+++.+|+.++++- .-+.+.++.++|||+.++|. .-+. .+..+||.++.++|+.++||-- .
T Consensus 60 dlWe~slk~g~~~ritS---------~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge~kRiTyf-G--- 126 (668)
T COG4946 60 DLWEYSLKDGKPLRITS---------GLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGEAKRITYF-G--- 126 (668)
T ss_pred HHHHhhhccCCeeEEec---------ccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCcEEEEEEe-c---
Confidence 47899999999998854 45677889999999988883 2222 2466999999999999999753 1
Q ss_pred eeccCCcccCCCCCccCCCe-EEEEEec----CCccEEEEEeCCCceeeceeecCeE---------E-------------
Q 008274 158 VNLHDCFTPLDKGVTKYSGG-FIWASEK----TGFRHLYLHDINGTCLGPITEGDWM---------V------------- 210 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~-~~~~s~~----~g~~~l~~~~~~~~~~~~lT~~~~~---------~------------- 210 (571)
..|.-+. .|.+|+ +++.++- ..|..||.+..+|.+.++|.-|... +
T Consensus 127 ----r~fT~Va---G~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~~e~LnlGpathiv~~dg~ivigRntydLP~WK~ 199 (668)
T COG4946 127 ----RRFTRVA---GWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIKTEPLNLGPATHIVIKDGIIVIGRNTYDLPHWKG 199 (668)
T ss_pred ----cccceee---ccCCCCCEEEEeccCCCcccceeeeEEccCCceeeeccCCceeeEEEeCCEEEEccCcccCccccc
Confidence 2232222 466666 5555543 3367888888877755554422100 0
Q ss_pred -----EEEEEEeec---------------------CcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEE
Q 008274 211 -----EQIVGVNEA---------------------SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHV 264 (571)
Q Consensus 211 -----~~~~~~s~d---------------------g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~ 264 (571)
..-.+.+.+ |..+||.++-++. -+||++++ +|. ..++-|+-..++-
T Consensus 200 YkGGtrGklWis~d~g~tFeK~vdl~~~vS~PmIV~~RvYFlsD~eG~--GnlYSvdl--dGk----DlrrHTnFtdYY~ 271 (668)
T COG4946 200 YKGGTRGKLWISSDGGKTFEKFVDLDGNVSSPMIVGERVYFLSDHEGV--GNLYSVDL--DGK----DLRRHTNFTDYYP 271 (668)
T ss_pred ccCCccceEEEEecCCcceeeeeecCCCcCCceEEcceEEEEecccCc--cceEEecc--CCc----hhhhcCCchhccc
Confidence 011112222 4589999998885 89999999 776 7778887666655
Q ss_pred EEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 265 AVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
-..+.||+.++|+..+ .||+++..+ +.++.|.-
T Consensus 272 R~~nsDGkrIvFq~~G-----dIylydP~t-d~lekldI 304 (668)
T COG4946 272 RNANSDGKRIVFQNAG-----DIYLYDPET-DSLEKLDI 304 (668)
T ss_pred cccCCCCcEEEEecCC-----cEEEeCCCc-Ccceeeec
Confidence 5788999999997654 899998743 33455543
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-11 Score=105.73 Aligned_cols=217 Identities=16% Similarity=0.198 Sum_probs=137.0
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECC--CCCCCChh-------
Q 008274 329 GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDN--RGTARRGL------- 399 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~--rG~~~~~~------- 399 (571)
+..+..-+|.|+.. +..++.|+++++-|-... .+.|.. -..+.+.....|++|+.||- ||..-.|.
T Consensus 25 ~c~Mtf~vylPp~a-~~~k~~P~lf~LSGLTCT---~~Nfi~-Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG 99 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDA-PRGKRCPVLFYLSGLTCT---HENFIE-KSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFG 99 (283)
T ss_pred ccceEEEEecCCCc-ccCCcCceEEEecCCccc---chhhHh-hhhHHHhHhhcCeEEECCCCCCCccccCCCccccccc
Confidence 46688889999875 344779999999995443 223321 12234566689999999994 55321111
Q ss_pred ---hh-HHHHhccCCC--CCchhHHHHHHHHHHc--CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc
Q 008274 400 ---KF-EASIKHNCGR--IDAEDQLTGAEWLIKQ--GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 471 (571)
Q Consensus 400 ---~~-~~~~~~~~~~--~~~~D~~~~~~~l~~~--~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~ 471 (571)
.| .++....|.. .+++-+...+-.++.. -.+|+.+++|.||||||+-|+..+++.|++++.+-+.+|+.+-.
T Consensus 100 ~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 100 QGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI 179 (283)
T ss_pred CCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc
Confidence 11 0111111111 0122233333333332 34789999999999999999999999999999999999998743
Q ss_pred cccchhhhhhcCCCCCChhhhccCCcchhhccCC---CcEEEEecCCCCCCChH-HHHHHHHHHHHcC-CCeeEEEcCCC
Q 008274 472 GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK---GKLLLVHGMIDENVHFR-HTARLINALVAAR-KPYEILIFPDE 546 (571)
Q Consensus 472 ~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~---~p~lli~G~~D~~v~~~-~~~~~~~~l~~~~-~~~~~~~~~~~ 546 (571)
.. ++=...+.|...+++..|...++...+++++ ..+||-+|+.|....-+ ..+.+.++.+... .++.++.-++-
T Consensus 180 ~c-pWGqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gy 258 (283)
T KOG3101|consen 180 NC-PWGQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGY 258 (283)
T ss_pred cC-cchHHHhhcccCCChHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCC
Confidence 21 1212223344445777787777777666664 46899999999887622 2334445444332 68888899999
Q ss_pred CCCCC
Q 008274 547 RHMPR 551 (571)
Q Consensus 547 ~H~~~ 551 (571)
.|+..
T Consensus 259 DHSYy 263 (283)
T KOG3101|consen 259 DHSYY 263 (283)
T ss_pred Cccee
Confidence 99853
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.29 E-value=9.5e-12 Score=105.83 Aligned_cols=206 Identities=13% Similarity=0.072 Sum_probs=134.9
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCC
Q 008274 314 LQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG 393 (571)
Q Consensus 314 ~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG 393 (571)
......+.+.+-. .|. -...+|.|.. ..|+.|++|||.+....... .-..+..+..+||+|+.++|--
T Consensus 40 ~~i~r~e~l~Yg~-~g~-q~VDIwg~~~------~~klfIfIHGGYW~~g~rk~----clsiv~~a~~~gY~vasvgY~l 107 (270)
T KOG4627|consen 40 KQIIRVEHLRYGE-GGR-QLVDIWGSTN------QAKLFIFIHGGYWQEGDRKM----CLSIVGPAVRRGYRVASVGYNL 107 (270)
T ss_pred ccccchhccccCC-CCc-eEEEEecCCC------CccEEEEEecchhhcCchhc----ccchhhhhhhcCeEEEEeccCc
Confidence 3344555555544 232 3355667754 45899999999776542222 1223567778999999998853
Q ss_pred CCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc-CCCeeEEEEEcCccCCccc
Q 008274 394 TARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR-FPDVFQCAVSGAPVTSWDG 472 (571)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~~v~~~~~~~~~~ 472 (571)
+.. +.. ... .+.++...++|+.+... +.+.+.+.|||.|+++++.++.+ +..++.+++..+|+.++.-
T Consensus 108 ~~q-~ht-L~q--------t~~~~~~gv~filk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~E 176 (270)
T KOG4627|consen 108 CPQ-VHT-LEQ--------TMTQFTHGVNFILKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRE 176 (270)
T ss_pred Ccc-ccc-HHH--------HHHHHHHHHHHHHHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHH
Confidence 321 100 111 15678888999888632 45679999999999999999876 4667888888888876532
Q ss_pred ccchhhhhhcCCCCCChhhhccCCc-chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 473 YDTFYTEKYMGLPSEDPVGYEYSSV-MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 473 ~~~~~~~~~~g~~~~~~~~~~~~s~-~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
....-.-.-+|...++. ...|+ +.....++.|+|++.|+.|..--.+|...++..+++ ..+..|++.+|.
T Consensus 177 L~~te~g~dlgLt~~~a---e~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~----a~~~~f~n~~hy 247 (270)
T KOG4627|consen 177 LSNTESGNDLGLTERNA---ESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK----ASFTLFKNYDHY 247 (270)
T ss_pred HhCCccccccCcccchh---hhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh----cceeecCCcchh
Confidence 21110001112222221 22222 344667788999999999998889999999998855 577889999996
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.5e-11 Score=107.64 Aligned_cols=118 Identities=22% Similarity=0.188 Sum_probs=81.1
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTA 395 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~ 395 (571)
.+.+.+.++..++ ++..++-.|.. +.-|++++.|||+.+.. .|..++..+. ..-..|+++|.||+|
T Consensus 48 dekedv~i~~~~~-t~n~Y~t~~~~-----t~gpil~l~HG~G~S~L-------SfA~~a~el~s~~~~r~~a~DlRgHG 114 (343)
T KOG2564|consen 48 DEKEDVSIDGSDL-TFNVYLTLPSA-----TEGPILLLLHGGGSSAL-------SFAIFASELKSKIRCRCLALDLRGHG 114 (343)
T ss_pred ccccccccCCCcc-eEEEEEecCCC-----CCccEEEEeecCcccch-------hHHHHHHHHHhhcceeEEEeeccccC
Confidence 3456666666554 56677666653 45699999999887755 3444566665 456788999999999
Q ss_pred CChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 396 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
.+--+-...... +...+|+.+.++++-.. +..+|.++||||||.+|.+.+..
T Consensus 115 eTk~~~e~dlS~---eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 115 ETKVENEDDLSL---ETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred ccccCChhhcCH---HHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhh
Confidence 764332222111 12367888777777644 34679999999999999888765
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.5e-12 Score=117.98 Aligned_cols=169 Identities=17% Similarity=0.127 Sum_probs=110.0
Q ss_pred cEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE
Q 008274 384 ILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS 463 (571)
Q Consensus 384 ~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~ 463 (571)
|.|+++|.||.|.+... ...........|+.+.++.+.+.-. .+++.++||||||.+++.+++++|++++++++
T Consensus 1 f~vi~~d~rG~g~S~~~----~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH----WDPDFPDYTTDDLAADLEALREALG--IKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSC----CGSGSCTHCHHHHHHHHHHHHHHHT--TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCC----ccCCcccccHHHHHHHHHHHHHHhC--CCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 68999999999877631 1112233347888888888888632 34599999999999999999999999999999
Q ss_pred cCccC--C----cccccc------------------------hh------hhhh-c------------CCCCC-------
Q 008274 464 GAPVT--S----WDGYDT------------------------FY------TEKY-M------------GLPSE------- 487 (571)
Q Consensus 464 ~~~~~--~----~~~~~~------------------------~~------~~~~-~------------g~~~~------- 487 (571)
.+++. . +..... .+ ..+. . .....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
T PF00561_consen 75 ISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNM 154 (230)
T ss_dssp ESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHH
T ss_pred EeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhh
Confidence 88851 0 000000 00 0000 0 00000
Q ss_pred ---ChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHH
Q 008274 488 ---DPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 563 (571)
Q Consensus 488 ---~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i 563 (571)
....+...++...+.++++|+|+++|++|..+|+.....+.+.+ .+.++++++++||.. ..++...+.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~----~~~~~~~~~~~GH~~-~~~~~~~~~~~i 228 (230)
T PF00561_consen 155 FWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI----PNSQLVLIEGSGHFA-FLEGPDEFNEII 228 (230)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS----TTEEEEEETTCCSTH-HHHSHHHHHHHH
T ss_pred ccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc----CCCEEEECCCCChHH-HhcCHHhhhhhh
Confidence 00011122333456678999999999999999999888865544 568999999999986 233444444433
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.9e-12 Score=106.34 Aligned_cols=202 Identities=14% Similarity=0.149 Sum_probs=123.8
Q ss_pred EEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCC
Q 008274 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA 430 (571)
Q Consensus 351 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 430 (571)
.|+++.|.-++.. ..|.++. .+......+.++++|.||.|.+...-+..... ...+|...+++.+...
T Consensus 44 ~iLlipGalGs~~--tDf~pql---~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~----ff~~Da~~avdLM~aL--- 111 (277)
T KOG2984|consen 44 YILLIPGALGSYK--TDFPPQL---LSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQ----FFMKDAEYAVDLMEAL--- 111 (277)
T ss_pred eeEeccccccccc--ccCCHHH---HhcCCCCceEEEEECCCCCCCCCCCcccchHH----HHHHhHHHHHHHHHHh---
Confidence 5666778655532 3454332 22222345999999999988764322221111 1246777777776654
Q ss_pred cCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc-----c-----cchhhhhhcCCCCCC---hhh----h-
Q 008274 431 KVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG-----Y-----DTFYTEKYMGLPSED---PVG----Y- 492 (571)
Q Consensus 431 d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~-----~-----~~~~~~~~~g~~~~~---~~~----~- 492 (571)
+..++.|+|||-||..|+..|+++++.+...|..++..-... + ...|.++. ..|.++ ++. +
T Consensus 112 k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~-R~P~e~~Yg~e~f~~~wa 190 (277)
T KOG2984|consen 112 KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARG-RQPYEDHYGPETFRTQWA 190 (277)
T ss_pred CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhh-cchHHHhcCHHHHHHHHH
Confidence 567899999999999999999999987766554333221000 0 01111111 111110 000 0
Q ss_pred ---------c---cCC-cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHH
Q 008274 493 ---------E---YSS-VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYM 559 (571)
Q Consensus 493 ---------~---~~s-~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~ 559 (571)
. ... .-.-+.++++|+||+||++|+.++-.+.--+... -.-.++.++|.++|.+ .....+++
T Consensus 191 ~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~----~~~a~~~~~peGkHn~-hLrya~eF 265 (277)
T KOG2984|consen 191 AWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVL----KSLAKVEIHPEGKHNF-HLRYAKEF 265 (277)
T ss_pred HHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhh----cccceEEEccCCCcce-eeechHHH
Confidence 0 000 1123678899999999999999987665443332 3456888999999998 34567788
Q ss_pred HHHHHHHHHHh
Q 008274 560 EERIWEFIERT 570 (571)
Q Consensus 560 ~~~i~~fl~~~ 570 (571)
...+++||++.
T Consensus 266 nklv~dFl~~~ 276 (277)
T KOG2984|consen 266 NKLVLDFLKST 276 (277)
T ss_pred HHHHHHHHhcc
Confidence 99999999864
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.23 E-value=1e-09 Score=109.20 Aligned_cols=231 Identities=17% Similarity=0.146 Sum_probs=132.2
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|||||++|||++.+ .||+.++.+++.++++......
T Consensus 43 ~~~~~~~~sP~g~~~~~v~~~-------------------------------------nly~~~~~~~~~~~lT~dg~~~ 85 (353)
T PF00930_consen 43 PKLQDAKWSPDGKYIAFVRDN-------------------------------------NLYLRDLATGQETQLTTDGEPG 85 (353)
T ss_dssp TTBSEEEE-SSSTEEEEEETT-------------------------------------EEEEESSTTSEEEESES--TTT
T ss_pred cccccceeecCCCeeEEEecC-------------------------------------ceEEEECCCCCeEEecccccee
Confidence 346778999999999998632 5788888888888887642110
Q ss_pred C---CCC------CCceeEEEEEccCCeEEEEEEeccCc--------------------------------cEEEEEEEC
Q 008274 103 D---QNY------DEEYLARVNWMHGNILTAQVLNRSQT--------------------------------KLKVLKFDI 141 (571)
Q Consensus 103 ~---~~~------~~~~~~~~~wspDg~~i~~~~~r~~~--------------------------------~~~i~~~d~ 141 (571)
- ..+ .-.....+-|||||+.|++..-.... ...|+++|+
T Consensus 86 i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~ 165 (353)
T PF00930_consen 86 IYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDL 165 (353)
T ss_dssp EEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEES
T ss_pred EEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEEC
Confidence 0 000 00112346799999988886543322 224555555
Q ss_pred CCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEE-EEecC-CccEEEEEeCCCceeeceee---cCeE-EEEE
Q 008274 142 KTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIW-ASEKT-GFRHLYLHDINGTCLGPITE---GDWM-VEQI 213 (571)
Q Consensus 142 ~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~-~s~~~-g~~~l~~~~~~~~~~~~lT~---~~~~-~~~~ 213 (571)
++|+.+.+.-... +.+....+..+ .|.+++ +++ ..+|. ....|++++..++..+.+.. ..|. ....
T Consensus 166 ~~~~~~~~~~~~~--~~~~~~yl~~v----~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~ 239 (353)
T PF00930_consen 166 ASGKTTELDPPNS--LNPQDYYLTRV----GWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDP 239 (353)
T ss_dssp SSTCCCEE---HH--HHTSSEEEEEE----EEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSE
T ss_pred CCCcEEEeeeccc--cCCCccCcccc----eecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecc
Confidence 5555433221100 00000001111 343332 443 34553 35677888876665443322 2231 1122
Q ss_pred EEEe-ecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCce--EEEEECCCCCEEEEEeeCCC-CCCEEEE
Q 008274 214 VGVN-EASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGK--HVAVLDHNMRNFVDFHDSLD-SPPRILL 289 (571)
Q Consensus 214 ~~~s-~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~--~~~~~s~~g~~~v~~~s~~~-~p~~l~~ 289 (571)
..+. ++++.+++.+.++| ..|||.++. ++. .+++||.++.. ....++++++.+.|...... .-..||+
T Consensus 240 ~~~~~~~~~~~l~~s~~~G--~~hly~~~~--~~~----~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~ 311 (353)
T PF00930_consen 240 PHFLGPDGNEFLWISERDG--YRHLYLYDL--DGG----KPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYR 311 (353)
T ss_dssp EEE-TTTSSEEEEEEETTS--SEEEEEEET--TSS----EEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEE
T ss_pred cccccCCCCEEEEEEEcCC--CcEEEEEcc--ccc----ceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEE
Confidence 2344 78888888888777 499999998 554 57799987643 24578899999988876532 3368889
Q ss_pred EEcCCCceeEeccCC
Q 008274 290 CSLQDGSLVLPLYEQ 304 (571)
Q Consensus 290 ~~~~~~~~~~~l~~~ 304 (571)
+++.++..++.|+..
T Consensus 312 v~~~~~~~~~~LT~~ 326 (353)
T PF00930_consen 312 VSLDSGGEPKCLTCE 326 (353)
T ss_dssp EETTETTEEEESSTT
T ss_pred EEeCCCCCeEeccCC
Confidence 998635667888874
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.2e-10 Score=106.73 Aligned_cols=220 Identities=20% Similarity=0.177 Sum_probs=86.2
Q ss_pred EEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCC-CCCChhhhHHHHhccCCC
Q 008274 333 YGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG-TARRGLKFEASIKHNCGR 411 (571)
Q Consensus 333 ~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG-~~~~~~~~~~~~~~~~~~ 411 (571)
.++-+.+... .+.-+||||-|-...-. . .+....+++.|.+.||.|+.+.++- ..++|. ..+.+
T Consensus 21 ~afe~~~~~~----~~~~~llfIGGLtDGl~-t---vpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~---~SL~~---- 85 (303)
T PF08538_consen 21 VAFEFTSSSS----SAPNALLFIGGLTDGLL-T---VPYLPDLAEALEETGWSLFQVQLSSSYSGWGT---SSLDR---- 85 (303)
T ss_dssp EEEEEEEE-T----TSSSEEEEE--TT--TT-----STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----HHH----
T ss_pred eEEEecCCCC----CCCcEEEEECCCCCCCC-C---CchHHHHHHHhccCCeEEEEEEecCccCCcCc---chhhh----
Confidence 4555554331 13347888876322111 1 1234456777778899999999885 344442 22222
Q ss_pred CCchhHHHHHHHHHHcC--CCcCCcEEEEeechHHHHHHHHHhcCC-----CeeEEEEEcCccCCcccccchhh------
Q 008274 412 IDAEDQLTGAEWLIKQG--LAKVGHIGLYGWSYGGYLSAITLARFP-----DVFQCAVSGAPVTSWDGYDTFYT------ 478 (571)
Q Consensus 412 ~~~~D~~~~~~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~------ 478 (571)
+++|+.++++||.... .-..++|+|+|||.|.+-++.++.... ..+.++|+.+|+.|-+.......
T Consensus 86 -D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~ 164 (303)
T PF08538_consen 86 -DVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYE 164 (303)
T ss_dssp -HHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HH
T ss_pred -HHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHH
Confidence 3789999999999873 135789999999999999999997642 56899999999998554322111
Q ss_pred h------hhc--CCCCC----------------Chhhhc-c----------------CCcchhhccCCCcEEEEecCCCC
Q 008274 479 E------KYM--GLPSE----------------DPVGYE-Y----------------SSVMHHVHKMKGKLLLVHGMIDE 517 (571)
Q Consensus 479 ~------~~~--g~~~~----------------~~~~~~-~----------------~s~~~~~~~~~~p~lli~G~~D~ 517 (571)
+ ... |...+ ...+|. - ........++++|+|++.+++|+
T Consensus 165 ~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DE 244 (303)
T PF08538_consen 165 ELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDE 244 (303)
T ss_dssp HHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT
T ss_pred HHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCc
Confidence 0 000 11110 001110 0 01112356678899999999999
Q ss_pred CCChH-HHHHHHHHHHHcCC----CeeEEEcCCCCCCCCCCCc---HHHHHHHHHHHHH
Q 008274 518 NVHFR-HTARLINALVAARK----PYEILIFPDERHMPRRHRD---RIYMEERIWEFIE 568 (571)
Q Consensus 518 ~v~~~-~~~~~~~~l~~~~~----~~~~~~~~~~~H~~~~~~~---~~~~~~~i~~fl~ 568 (571)
.||.. .-+++.++++..-. ....-++||++|.+..... ++.+.+++.+||+
T Consensus 245 yvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 245 YVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -----------------------------------------------------------
T ss_pred eecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 99875 33556666655422 2234589999999865443 4578888888874
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.8e-08 Score=93.97 Aligned_cols=235 Identities=12% Similarity=0.154 Sum_probs=131.4
Q ss_pred eeeeeeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEE
Q 008274 4 AFHVLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 83 (571)
Q Consensus 4 ~~~~~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 83 (571)
.|.+++.+|....+++.+-...-+..+||+++.|.|++.. . .|+
T Consensus 62 ly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~--~----------------------------------~l~ 105 (386)
T PF14583_consen 62 LYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG--R----------------------------------SLR 105 (386)
T ss_dssp EEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT--T----------------------------------EEE
T ss_pred eEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC--C----------------------------------eEE
Confidence 4889999999999987654433467799999999996521 1 578
Q ss_pred EEECCCCceEEEeccCCCCCCCCCCceeEEEEEc--cCCeEEEEEEeccC------------------ccEEEEEEECCC
Q 008274 84 VVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM--HGNILTAQVLNRSQ------------------TKLKVLKFDIKT 143 (571)
Q Consensus 84 ~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws--pDg~~i~~~~~r~~------------------~~~~i~~~d~~~ 143 (571)
.+||++.+.+.+-.- .+.+....+|+ .|++.++.+..... ....|+.+|++|
T Consensus 106 ~vdL~T~e~~~vy~~--------p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~t 177 (386)
T PF14583_consen 106 RVDLDTLEERVVYEV--------PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKT 177 (386)
T ss_dssp EEETTT--EEEEEE----------TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT
T ss_pred EEECCcCcEEEEEEC--------CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCC
Confidence 899999888766431 24444446775 46777765532221 156899999999
Q ss_pred CceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecC--Cc-cEEEEEeCCCceeeceeec-CeEEEEEEEEeec
Q 008274 144 GQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT--GF-RHLYLHDINGTCLGPITEG-DWMVEQIVGVNEA 219 (571)
Q Consensus 144 g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~--g~-~~l~~~~~~~~~~~~lT~~-~~~~~~~~~~s~d 219 (571)
|+.+.|..+ ..|++. ..|+|. ++..+.|.-+.. .. ..||.++.+++..+.+... ..+...-..|++|
T Consensus 178 G~~~~v~~~--~~wlgH-~~fsP~------dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~D 248 (386)
T PF14583_consen 178 GERKVVFED--TDWLGH-VQFSPT------DPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPD 248 (386)
T ss_dssp --EEEEEEE--SS-EEE-EEEETT------EEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TT
T ss_pred CceeEEEec--CccccC-cccCCC------CCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCC
Confidence 999988764 467763 556663 344466655442 22 4899999999887766442 2233222359999
Q ss_pred CcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCC------------CCCCEE
Q 008274 220 SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSL------------DSPPRI 287 (571)
Q Consensus 220 g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~------------~~p~~l 287 (571)
|+.|+|.+...+...+.|+.+++ ... +.+++...+.......|+||+.+|==.+.. ..-|-|
T Consensus 249 G~~i~y~~~~~~~~~~~i~~~d~--~t~----~~~~~~~~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i 322 (386)
T PF14583_consen 249 GSTIWYDSYTPGGQDFWIAGYDP--DTG----ERRRLMEMPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWI 322 (386)
T ss_dssp SS-EEEEEEETTT--EEEEEE-T--TT------EEEEEEE-SEEEEEE-TTSSEEEEEE-------------------EE
T ss_pred CCEEEEEeecCCCCceEEEeeCC--CCC----CceEEEeCCceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEE
Confidence 99999988755555788999998 332 344554444455567789998876433221 111477
Q ss_pred EEEEcCCCce
Q 008274 288 LLCSLQDGSL 297 (571)
Q Consensus 288 ~~~~~~~~~~ 297 (571)
|++++..+..
T Consensus 323 ~~~~~~~~~~ 332 (386)
T PF14583_consen 323 YLFDVEAGRF 332 (386)
T ss_dssp EEEETTTTEE
T ss_pred EEeccccCce
Confidence 7788765543
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.6e-10 Score=106.02 Aligned_cols=186 Identities=18% Similarity=0.254 Sum_probs=110.8
Q ss_pred hhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 375 RAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 375 ~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
....+.++||+|+++||.|-|. .|..... ....+-|.+.+.+.+... +.-...+++++|+|.||+.+++++..
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~---~y~~~~~---~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGT---PYLNGRS---EAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCC---cccCcHh---HHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 3566779999999999998765 2211110 001133444444444332 22235799999999999999887743
Q ss_pred ----CCCe---eEEEEEcCccCCcccc--------------------cchhh------hhh----------------c--
Q 008274 454 ----FPDV---FQCAVSGAPVTSWDGY--------------------DTFYT------EKY----------------M-- 482 (571)
Q Consensus 454 ----~~~~---~~~~v~~~~~~~~~~~--------------------~~~~~------~~~----------------~-- 482 (571)
.|++ +.++++.+|+.+.... ...|. ..+ .
T Consensus 92 ~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~ 171 (290)
T PF03583_consen 92 APSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLAD 171 (290)
T ss_pred hHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHH
Confidence 3555 6778888877663210 00000 000 0
Q ss_pred ---CCCCCC-----hhhhccC-C-----cc------hhh---cc--CCCcEEEEecCCCCCCChHHHHHHHHHHHHcC-C
Q 008274 483 ---GLPSED-----PVGYEYS-S-----VM------HHV---HK--MKGKLLLVHGMIDENVHFRHTARLINALVAAR-K 536 (571)
Q Consensus 483 ---g~~~~~-----~~~~~~~-s-----~~------~~~---~~--~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~-~ 536 (571)
...... ...+... + .+ ..+ .+ -+.|++|.||..|++||+....+++++++++| .
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a 251 (290)
T PF03583_consen 172 IVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGA 251 (290)
T ss_pred HHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCC
Confidence 000000 0000000 0 00 001 11 14699999999999999999999999999999 8
Q ss_pred CeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 537 PYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 537 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+++++.++..+|..... ......++||...
T Consensus 252 ~V~~~~~~~~~H~~~~~----~~~~~a~~Wl~~r 281 (290)
T PF03583_consen 252 DVEYVRYPGGGHLGAAF----ASAPDALAWLDDR 281 (290)
T ss_pred CEEEEecCCCChhhhhh----cCcHHHHHHHHHH
Confidence 99999999999974221 1224566777654
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.7e-10 Score=106.53 Aligned_cols=214 Identities=19% Similarity=0.099 Sum_probs=135.0
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCC--------------CCC--CChhhhHHHHhccCC
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR--------------GTA--RRGLKFEASIKHNCG 410 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r--------------G~~--~~~~~~~~~~~~~~~ 410 (571)
++.||+++.||-..... .+. ......+...+.|++++++|-. |.+ -|.. +.... ...+
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~-~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d-~~~~~-~~~~ 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVY-LLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSD-WTQPP-WASG 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceE-eccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecc-cccCc-cccC
Confidence 68899999999544321 111 1222345566789999987432 211 1111 11000 0001
Q ss_pred CCCchhHH-HHHH-HHHHcCCCcC--CcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc---------cc--cc
Q 008274 411 RIDAEDQL-TGAE-WLIKQGLAKV--GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD---------GY--DT 475 (571)
Q Consensus 411 ~~~~~D~~-~~~~-~l~~~~~~d~--~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~---------~~--~~ 475 (571)
.....+++ .-+- .+.+....+. ++.+|+||||||+-|+.+|+++|++|+.+.+.+|+.+.. .. ..
T Consensus 126 ~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~ 205 (316)
T COG0627 126 PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGG 205 (316)
T ss_pred ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccC
Confidence 12233332 2233 3333333455 389999999999999999999999999999999998754 11 12
Q ss_pred hhhhhhcCCCCCChhhhccCCcchhhcc--------------CCCcEEEEecCCCCCCC--hHHHHHHHHHHHHcCCCee
Q 008274 476 FYTEKYMGLPSEDPVGYEYSSVMHHVHK--------------MKGKLLLVHGMIDENVH--FRHTARLINALVAARKPYE 539 (571)
Q Consensus 476 ~~~~~~~g~~~~~~~~~~~~s~~~~~~~--------------~~~p~lli~G~~D~~v~--~~~~~~~~~~l~~~~~~~~ 539 (571)
...+.++|.... ..+..++|...+++ ...++++.+|..|.... ......+.+++.+.|.+..
T Consensus 206 ~~~~~~~G~~~~--~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~ 283 (316)
T COG0627 206 KAFNAMLGPDSD--PAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNG 283 (316)
T ss_pred ccHHHhcCCCcc--ccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCce
Confidence 223334444322 35566677666654 34678888999998764 3347889999999999999
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+...++..|.+. ......+..+.|+.+.|
T Consensus 284 ~~~~~~G~Hsw~---~w~~~l~~~~~~~a~~l 312 (316)
T COG0627 284 VRDQPGGDHSWY---FWASQLADHLPWLAGAL 312 (316)
T ss_pred eeeCCCCCcCHH---HHHHHHHHHHHHHHHHh
Confidence 999999999863 35556677788876643
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.3e-09 Score=123.05 Aligned_cols=231 Identities=13% Similarity=0.070 Sum_probs=132.0
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCC-CCCCceEEEEEcCCCCceeeccccccc-chhhhHHHHhCCcEEEEECCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRY-GPPPYKTLISVYGGPCVQLVCDSWINT-VDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~-~~~~~P~vv~~hGg~~~~~~~~~~~~~-~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
.+..+.+.. ..+..+.|.|...+. .++..|.||++||.+.... .|... -+.+...|.++||.|+++|+. .
T Consensus 38 tp~~vv~~~---~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~---~~d~~~~~s~v~~L~~~g~~v~~~d~G-~- 109 (994)
T PRK07868 38 SPFQIVESV---PMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSAD---MWDVTRDDGAVGILHRAGLDPWVIDFG-S- 109 (994)
T ss_pred CCCcEEEEc---CcEEEEEeCCCCccccccCCCCcEEEECCCCCCcc---ceecCCcccHHHHHHHCCCEEEEEcCC-C-
Confidence 344455544 235556667754211 0123367788999776654 23221 111368899999999999963 2
Q ss_pred CChhhhHHHHhccCCCCCchh----HHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-CCeeEEEEEcCccCCc
Q 008274 396 RRGLKFEASIKHNCGRIDAED----QLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSW 470 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D----~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-~~~~~~~v~~~~~~~~ 470 (571)
++... . .. ...+.| +.++++.+... ..+++.++||||||.+++.+++.+ +++++.++..+...|+
T Consensus 110 -~~~~~---~--~~-~~~l~~~i~~l~~~l~~v~~~---~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 110 -PDKVE---G--GM-ERNLADHVVALSEAIDTVKDV---TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDT 179 (994)
T ss_pred -CChhH---c--Cc-cCCHHHHHHHHHHHHHHHHHh---hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccccc
Confidence 22110 0 00 111222 23333333332 235799999999999998887644 5678887764433221
Q ss_pred cc------------c---------------cch-----h--------hhhh------cCCCCC--C---------hh---
Q 008274 471 DG------------Y---------------DTF-----Y--------TEKY------MGLPSE--D---------PV--- 490 (571)
Q Consensus 471 ~~------------~---------------~~~-----~--------~~~~------~g~~~~--~---------~~--- 490 (571)
.. . ..+ + ...+ +..+.. + .+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~ 259 (994)
T PRK07868 180 LAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWI 259 (994)
T ss_pred CCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhcc
Confidence 10 0 000 0 0000 000000 0 00
Q ss_pred ------------hhcc-CCcc----------hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeE-EEcCCC
Q 008274 491 ------------GYEY-SSVM----------HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI-LIFPDE 546 (571)
Q Consensus 491 ------------~~~~-~s~~----------~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 546 (571)
.+.. +... ..+.++++|+|+++|++|.++++..+..+.+.+ ...++ .+++++
T Consensus 260 ~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i----~~a~~~~~~~~~ 335 (994)
T PRK07868 260 AWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAA----PNAEVYESLIRA 335 (994)
T ss_pred ccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC----CCCeEEEEeCCC
Confidence 0000 0111 136778899999999999999999998887765 23455 577899
Q ss_pred CCCC--CCCCcHHHHHHHHHHHHHHh
Q 008274 547 RHMP--RRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 547 ~H~~--~~~~~~~~~~~~i~~fl~~~ 570 (571)
||.. ......+.++..+.+||.++
T Consensus 336 GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 336 GHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred CCEeeeechhhhhhhChHHHHHHHHh
Confidence 9973 45667888999999999874
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.6e-09 Score=95.71 Aligned_cols=177 Identities=19% Similarity=0.156 Sum_probs=100.8
Q ss_pred EEEEcCCCCceeecccccccchhhhHHHHhCC--cEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 352 LISVYGGPCVQLVCDSWINTVDMRAQYLRSKG--ILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 352 vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G--~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|+++||-..+.. + .......+++++.+ ..+.+++++.. .++..+.+..++++.
T Consensus 2 ilYlHGF~Ssp~---S--~Ka~~l~~~~~~~~~~~~~~~p~l~~~-------------------p~~a~~~l~~~i~~~- 56 (187)
T PF05728_consen 2 ILYLHGFNSSPQ---S--FKAQALKQYFAEHGPDIQYPCPDLPPF-------------------PEEAIAQLEQLIEEL- 56 (187)
T ss_pred eEEecCCCCCCC---C--HHHHHHHHHHHHhCCCceEECCCCCcC-------------------HHHHHHHHHHHHHhC-
Confidence 789999544432 1 12233456677665 45677776522 233444445555542
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc-ccccchhhhhh---cCCCCC-ChhhhccCCcchhh-cc
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW-DGYDTFYTEKY---MGLPSE-DPVGYEYSSVMHHV-HK 503 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~---~g~~~~-~~~~~~~~s~~~~~-~~ 503 (571)
....+.|+|.|+||+.|.+++.+++ .++ |+++|.... ........+.. .+.... ....+.+...+... ..
T Consensus 57 -~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~ 132 (187)
T PF05728_consen 57 -KPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPT 132 (187)
T ss_pred -CCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccC
Confidence 3344999999999999999998774 234 777776652 11111111100 000000 01111111111111 11
Q ss_pred CCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 504 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 504 ~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
-..++++++++.|++++++.+...++ .+..++.++++|.+. +..+..+.|++|+
T Consensus 133 ~~~~~lvll~~~DEvLd~~~a~~~~~-------~~~~~i~~ggdH~f~---~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYREAVAKYR-------GCAQIIEEGGDHSFQ---DFEEYLPQIIAFL 186 (187)
T ss_pred CCccEEEEEecCCcccCHHHHHHHhc-------CceEEEEeCCCCCCc---cHHHHHHHHHHhh
Confidence 23589999999999999876544443 234456788899984 4677788899887
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.7e-10 Score=106.30 Aligned_cols=121 Identities=17% Similarity=0.057 Sum_probs=85.4
Q ss_pred CcEEEEEEEcCCCCCC--CCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 329 GTVLYGALYKPDESRY--GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~--~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
+.++...++.|..... ...++|+|++-||.+... ..+...++.+++.||+|..++++|+...+..-.....
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~-------~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~ 121 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYV-------TGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGP 121 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCCCCc-------cchhhhHHHHhhCceEEEeccCCCcccccCChhhcCC
Confidence 5678888888876421 113789999999965542 2456679999999999999999996433222111121
Q ss_pred cc----CCCCCchhHHHHHHHHHHc---C----CCcCCcEEEEeechHHHHHHHHHhcCCC
Q 008274 407 HN----CGRIDAEDQLTGAEWLIKQ---G----LAKVGHIGLYGWSYGGYLSAITLARFPD 456 (571)
Q Consensus 407 ~~----~~~~~~~D~~~~~~~l~~~---~----~~d~~~i~l~G~S~GG~~a~~~~~~~~~ 456 (571)
.. ..-....|+...+++|++. + .+|..+|+++|||+||+.++.++..+.+
T Consensus 122 ~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 122 GSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 00 1112367888888888876 4 4788999999999999999988876543
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.9e-09 Score=85.30 Aligned_cols=185 Identities=19% Similarity=0.203 Sum_probs=112.6
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCc-hhHHHHHHHHHHcC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDA-EDQLTGAEWLIKQG 428 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~l~~~~ 428 (571)
-+||+.||.+.++. +..+...+..|+.+|+.|+.++++-.-.+... ... ...+.... ...+.++..|...
T Consensus 15 ~tilLaHGAGasmd-----St~m~~~a~~la~~G~~vaRfefpYma~Rrtg-~rk--Pp~~~~t~~~~~~~~~aql~~~- 85 (213)
T COG3571 15 VTILLAHGAGASMD-----STSMTAVAAALARRGWLVARFEFPYMAARRTG-RRK--PPPGSGTLNPEYIVAIAQLRAG- 85 (213)
T ss_pred EEEEEecCCCCCCC-----CHHHHHHHHHHHhCceeEEEeecchhhhcccc-CCC--CcCccccCCHHHHHHHHHHHhc-
Confidence 46778899766654 23455568889999999999997632111000 000 01111112 2234444445443
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE-cCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCc
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS-GAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGK 507 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p 507 (571)
.+..++++-|+||||-++.+.+..----+.+.++ ..|++. .|.|+.- -..++..+++|
T Consensus 86 -l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhp------------pGKPe~~--------Rt~HL~gl~tP 144 (213)
T COG3571 86 -LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHP------------PGKPEQL--------RTEHLTGLKTP 144 (213)
T ss_pred -ccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCC------------CCCcccc--------hhhhccCCCCC
Confidence 3667899999999999999888642222455554 334432 1333221 13578889999
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCC---------CCcHHHHHHHHHHHHHH
Q 008274 508 LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR---------HRDRIYMEERIWEFIER 569 (571)
Q Consensus 508 ~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~---------~~~~~~~~~~i~~fl~~ 569 (571)
+||.||+.|+.-..++...+ +| ..+.+++.+.++.|.+.. ....+...+.+..|...
T Consensus 145 tli~qGtrD~fGtr~~Va~y--~l---s~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 145 TLITQGTRDEFGTRDEVAGY--AL---SDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred eEEeecccccccCHHHHHhh--hc---CCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99999999998776654222 12 468899999999998622 12344556677777654
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.2e-09 Score=98.67 Aligned_cols=206 Identities=17% Similarity=0.112 Sum_probs=118.4
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCC----cEEEEECCCCCC
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG----ILVWKLDNRGTA 395 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~rG~~ 395 (571)
+.+.+...-..+....+|.|+++ ....++||++++||-...+. .........|...| -++|.+|+-...
T Consensus 70 ~~~~~~~~l~~~~~~vv~lppgy-~~~~k~pvl~~~DG~~~~~~------g~i~~~~dsli~~g~i~pai~vgid~~d~~ 142 (299)
T COG2382 70 EEILYSSELLSERRRVVYLPPGY-NPLEKYPVLYLQDGQDWFRS------GRIPRILDSLIAAGEIPPAILVGIDYIDVK 142 (299)
T ss_pred hhhhhhhhhccceeEEEEeCCCC-CccccccEEEEeccHHHHhc------CChHHHHHHHHHcCCCCCceEEecCCCCHH
Confidence 33333333334566677888776 34479999999999433222 11122234455443 678888875322
Q ss_pred CChhhhHHHHhccCCCCCchhH-HHHHHHHHHc--CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc
Q 008274 396 RRGLKFEASIKHNCGRIDAEDQ-LTGAEWLIKQ--GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG 472 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D~-~~~~~~l~~~--~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~ 472 (571)
.+...+. .... ....+ .+.+-++.+. -.-+.++-+|+|.|+||.++++++.++|++|.++++.+|...|.-
T Consensus 143 ~R~~~~~-----~n~~-~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~ 216 (299)
T COG2382 143 KRREELH-----CNEA-YWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTP 216 (299)
T ss_pred HHHHHhc-----ccHH-HHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCc
Confidence 2222111 1100 01112 2233344333 123567889999999999999999999999999999999877643
Q ss_pred ccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC
Q 008274 473 YDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR 551 (571)
Q Consensus 473 ~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 551 (571)
.... +.. +.....+-.........-++...++.+.+.+ ...++++.|+..+.+..+..|+| ||...
T Consensus 217 ~~~~--------~~~--~~~~~l~~~~a~~~~~~~~l~~g~~~~~~~~--pNr~L~~~L~~~g~~~~yre~~G-gHdw~ 282 (299)
T COG2382 217 LDTQ--------PQG--EVAESLKILHAIGTDERIVLTTGGEEGDFLR--PNRALAAQLEKKGIPYYYREYPG-GHDWA 282 (299)
T ss_pred cccc--------ccc--chhhhhhhhhccCccceEEeecCCccccccc--hhHHHHHHHHhcCCcceeeecCC-CCchh
Confidence 2211 000 0000011111122222333444444444444 56778899999999999999999 99763
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.4e-09 Score=92.65 Aligned_cols=207 Identities=18% Similarity=0.253 Sum_probs=114.7
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC-CCCh-
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-ARRG- 398 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~~~- 398 (571)
...+...+|..+..|.-.|... .+++.|.||+..|....+ . .+..++.+|+.+||.|+.+|.--+ |.+.
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~--~~~~~~tiliA~Gf~rrm---d----h~agLA~YL~~NGFhViRyDsl~HvGlSsG 74 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNN--EPKRNNTILIAPGFARRM---D----HFAGLAEYLSANGFHVIRYDSLNHVGLSSG 74 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TT--S---S-EEEEE-TT-GGG---G----GGHHHHHHHHTTT--EEEE---B-------
T ss_pred cceeEcCCCCEEEEeccCCCCC--CcccCCeEEEecchhHHH---H----HHHHHHHHHhhCCeEEEeccccccccCCCC
Confidence 4566778999999999999864 346778999888854432 2 345578999999999999997643 2222
Q ss_pred --hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-cc
Q 008274 399 --LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY-DT 475 (571)
Q Consensus 399 --~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~-~~ 475 (571)
.+|.... ...|+...++||...+ ..+++++..|.-|-+|...+++ ++ ..-+|..-|+.++... ..
T Consensus 75 ~I~eftms~-------g~~sL~~V~dwl~~~g---~~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGVVnlr~TLe~ 142 (294)
T PF02273_consen 75 DINEFTMSI-------GKASLLTVIDWLATRG---IRRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGVVNLRDTLEK 142 (294)
T ss_dssp ------HHH-------HHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HHHHHHH
T ss_pred ChhhcchHH-------hHHHHHHHHHHHHhcC---CCcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeeeeeHHHHHHH
Confidence 2222111 1467889999999764 4679999999999999999995 44 3455555588886532 11
Q ss_pred hhhhhhcCCC-----CC--------Chhhhc----------cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHH
Q 008274 476 FYTEKYMGLP-----SE--------DPVGYE----------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALV 532 (571)
Q Consensus 476 ~~~~~~~g~~-----~~--------~~~~~~----------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~ 532 (571)
.+...|++.| .. ..+.|. -.|-...++++.+|++.+++.+|..|......++...+.
T Consensus 143 al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~ 222 (294)
T PF02273_consen 143 ALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNIN 222 (294)
T ss_dssp HHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-T
T ss_pred HhccchhhcchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcC
Confidence 2222233222 11 001110 013344577888999999999999999888888776552
Q ss_pred HcCCCeeEEEcCCCCCCC
Q 008274 533 AARKPYEILIFPDERHMP 550 (571)
Q Consensus 533 ~~~~~~~~~~~~~~~H~~ 550 (571)
...+++..++|+.|.+
T Consensus 223 --s~~~klysl~Gs~HdL 238 (294)
T PF02273_consen 223 --SNKCKLYSLPGSSHDL 238 (294)
T ss_dssp --T--EEEEEETT-SS-T
T ss_pred --CCceeEEEecCccchh
Confidence 2578899999999987
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.9e-09 Score=99.28 Aligned_cols=205 Identities=18% Similarity=0.145 Sum_probs=126.4
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
.+.|.++++||--++.. .|..+...|+ ..|-.|+.+|.|-+|.+... ..+ ......+|+...++...
T Consensus 50 ~~~Pp~i~lHGl~GS~~-------Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~---~~h--~~~~ma~dv~~Fi~~v~ 117 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKE-------NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI---TVH--NYEAMAEDVKLFIDGVG 117 (315)
T ss_pred CCCCceEEecccccCCC-------CHHHHHHHhcccccCceEEEecccCCCCccc---ccc--CHHHHHHHHHHHHHHcc
Confidence 45688888999666532 3444566666 57889999999988866421 111 11122455555555554
Q ss_pred HcCCCcCCcEEEEeechHH-HHHHHHHhcCCCeeEEEEE--cCcc-CCccc------------c--c----c--------
Q 008274 426 KQGLAKVGHIGLYGWSYGG-YLSAITLARFPDVFQCAVS--GAPV-TSWDG------------Y--D----T-------- 475 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG-~~a~~~~~~~~~~~~~~v~--~~~~-~~~~~------------~--~----~-------- 475 (571)
... -..++.++|||||| .+++..++..|+....++. .+|. ..... . . .
T Consensus 118 ~~~--~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~ 195 (315)
T KOG2382|consen 118 GST--RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKS 195 (315)
T ss_pred ccc--ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHH
Confidence 321 24579999999999 7777777888888766555 3441 11000 0 0 0
Q ss_pred ------------hhhhhhcCCCCCCh-----------hhhc---cCCcchhh--ccCCCcEEEEecCCCCCCChHHHHHH
Q 008274 476 ------------FYTEKYMGLPSEDP-----------VGYE---YSSVMHHV--HKMKGKLLLVHGMIDENVHFRHTARL 527 (571)
Q Consensus 476 ------------~~~~~~~g~~~~~~-----------~~~~---~~s~~~~~--~~~~~p~lli~G~~D~~v~~~~~~~~ 527 (571)
+....+.+.+.+.. +.+. ..+....+ .....|+|+++|.++..++.++-..+
T Consensus 196 l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~ 275 (315)
T KOG2382|consen 196 LIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRM 275 (315)
T ss_pred HHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHH
Confidence 00000000111100 0111 11111122 33457999999999999998877777
Q ss_pred HHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 528 INALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 528 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.+ ..++++.++++||+. ..++.+.+.+.|.+|+..+
T Consensus 276 ~~~f----p~~e~~~ld~aGHwV-h~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 276 EKIF----PNVEVHELDEAGHWV-HLEKPEEFIESISEFLEEP 313 (315)
T ss_pred HHhc----cchheeecccCCcee-ecCCHHHHHHHHHHHhccc
Confidence 6655 458999999999998 5688999999999998765
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.9e-09 Score=103.61 Aligned_cols=248 Identities=16% Similarity=0.163 Sum_probs=160.5
Q ss_pred hccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc--cchhhhHHHHhCCcEEEE
Q 008274 311 IKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN--TVDMRAQYLRSKGILVWK 388 (571)
Q Consensus 311 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--~~~~~~~~l~~~G~~v~~ 388 (571)
+...+. ..|...+.+.||..+... -.|... ++.|+|++.||--.+.. .|.. .-...+-.|+++||.|..
T Consensus 41 i~~~gy-~~E~h~V~T~DgYiL~lh-RIp~~~----~~rp~Vll~HGLl~sS~---~Wv~n~p~~sLaf~LadaGYDVWL 111 (403)
T KOG2624|consen 41 IEKYGY-PVEEHEVTTEDGYILTLH-RIPRGK----KKRPVVLLQHGLLASSS---SWVLNGPEQSLAFLLADAGYDVWL 111 (403)
T ss_pred HHHcCC-ceEEEEEEccCCeEEEEe-eecCCC----CCCCcEEEeeccccccc---cceecCccccHHHHHHHcCCceee
Confidence 333444 678999999999855444 344442 57899999999554433 3421 123356778899999999
Q ss_pred ECCCCCCCChhhhHHHH--hc-----cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC---ee
Q 008274 389 LDNRGTARRGLKFEASI--KH-----NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD---VF 458 (571)
Q Consensus 389 ~d~rG~~~~~~~~~~~~--~~-----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~---~~ 458 (571)
-|.||...+.+...-.. .. .+.+...-|+-+.++++.+.. ..+++..+|||.|+.....+++..|+ ++
T Consensus 112 gN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI 189 (403)
T KOG2624|consen 112 GNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKI 189 (403)
T ss_pred ecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc--cccceEEEEEEccchhheehhcccchhhhhh
Confidence 99999544322111000 00 112224568999999998864 46799999999999999999888765 57
Q ss_pred EEEEEcCccCCcc---cc-------------------------c-ch----hhh------------------hhcC----
Q 008274 459 QCAVSGAPVTSWD---GY-------------------------D-TF----YTE------------------KYMG---- 483 (571)
Q Consensus 459 ~~~v~~~~~~~~~---~~-------------------------~-~~----~~~------------------~~~g---- 483 (571)
+..++.+|+.-.. .+ . .. +.. ...|
T Consensus 190 ~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~ 269 (403)
T KOG2624|consen 190 KSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSN 269 (403)
T ss_pred heeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchH
Confidence 8888888876221 00 0 00 000 0000
Q ss_pred -------------CCC---------------------------CChhhhcc-CCcchhhccCCCcEEEEecCCCCCCChH
Q 008274 484 -------------LPS---------------------------EDPVGYEY-SSVMHHVHKMKGKLLLVHGMIDENVHFR 522 (571)
Q Consensus 484 -------------~~~---------------------------~~~~~~~~-~s~~~~~~~~~~p~lli~G~~D~~v~~~ 522 (571)
.|. .+...|.. ..|...+.+++.|+.+++|.+|..+.++
T Consensus 270 ~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~ 349 (403)
T KOG2624|consen 270 NWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPE 349 (403)
T ss_pred hhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHH
Confidence 000 12222222 2455567888999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeeEEEcCCCCCC--CCCCCcHHHHHHHHHHHHHHh
Q 008274 523 HTARLINALVAARKPYEILIFPDERHM--PRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 523 ~~~~~~~~l~~~~~~~~~~~~~~~~H~--~~~~~~~~~~~~~i~~fl~~~ 570 (571)
....+...+..... ....-+++-+|. +.....++.+++.+++.+++.
T Consensus 350 DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 350 DVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred HHHHHHHhcccccc-cccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 99888777655433 233337888895 234567888999999988753
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.9e-08 Score=91.41 Aligned_cols=223 Identities=15% Similarity=0.096 Sum_probs=118.7
Q ss_pred CCCCeEEEEEcCC-CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcE-EEEECCCC
Q 008274 316 LEPPDIVQIQAND-GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGIL-VWKLDNRG 393 (571)
Q Consensus 316 ~~~~~~~~~~~~d-g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~-v~~~d~rG 393 (571)
..+.+...+.+.+ |.....++..|.+... +.+||||.++-|..-.-. -.+.....+++.-.. .+.+.|+.
T Consensus 6 ~~~~~~~~l~s~~~~~~yri~i~~P~~~~~-~~~YpVlY~lDGn~vf~~-------~~~~~~~~~~~~~~~~iv~iGye~ 77 (264)
T COG2819 6 YPHFRERDLKSANTGRKYRIFIATPKNYPK-PGGYPVLYMLDGNAVFNA-------LTEIMLRILADLPPPVIVGIGYET 77 (264)
T ss_pred cccceeEeeeecCCCcEEEEEecCCCCCCC-CCCCcEEEEecchhhhch-------HHHHhhhhhhcCCCceEEEecccc
Confidence 3455566666654 5778899999988743 345999888777422211 111112223332211 22222221
Q ss_pred ---------CCCChh----hhHHHH----hccCCC--CCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 394 ---------TARRGL----KFEASI----KHNCGR--IDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 394 ---------~~~~~~----~~~~~~----~~~~~~--~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
...+.. ...... ...-|. .-.+-+.+-++-+++. ..++.++.+|+|||+||.+++.++..
T Consensus 78 ~~~~~~~~r~~DyTp~~~~~~~~~~~~~~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~ 157 (264)
T COG2819 78 ILVFDPNRRAYDYTPPSANAIVASSRDGFYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLT 157 (264)
T ss_pred ccccccccccccCCCCCCCcccccccCCCCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhc
Confidence 111110 000000 011111 0123344455555554 55788999999999999999999999
Q ss_pred CCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEe--cCCCCCCC------hHHHH
Q 008274 454 FPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVH--GMIDENVH------FRHTA 525 (571)
Q Consensus 454 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~--G~~D~~v~------~~~~~ 525 (571)
+|+.|.+.++.+|-.-|.. .......+..... . ..++.|.- |+.|.... ..++.
T Consensus 158 ~p~~F~~y~~~SPSlWw~n----------------~~~l~~~~~~~~~-~-~~~i~l~iG~~e~~~~~~~~~~~~~~~~~ 219 (264)
T COG2819 158 YPDCFGRYGLISPSLWWHN----------------EAILREIESLKLL-K-TKRICLYIGSGELDSSRSIRMAENKQEAA 219 (264)
T ss_pred CcchhceeeeecchhhhCC----------------HHHhccccccccC-C-CcceEEEecccccCcchhhhhhhHHHHHH
Confidence 9999999999998654321 1111111111111 1 33444444 44443222 34445
Q ss_pred HHHHHHHH-cCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 526 RLINALVA-ARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 526 ~~~~~l~~-~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+....+++ .+..+.+..+|+.+|+- .....+...++|+.
T Consensus 220 ~~~~~~~~~~g~~~~f~~~~~~~H~~----~~~~~~~~al~~l~ 259 (264)
T COG2819 220 ELSSLLEKRTGARLVFQEEPLEHHGS----VIHASLPSALRFLD 259 (264)
T ss_pred HHHHHHhhccCCceEecccccccccc----hHHHHHHHHHHhhh
Confidence 55555666 77899999999888874 22333444555553
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.1e-09 Score=97.85 Aligned_cols=189 Identities=13% Similarity=0.146 Sum_probs=117.3
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHH------hccC------CC---
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI------KHNC------GR--- 411 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~------~~~~------~~--- 411 (571)
.++|+|||-||-.+++++ |+.+.-.||++||+|+++.+|..+..-..+.... ...+ ..
T Consensus 116 ~k~PvvvFSHGLggsRt~-------YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ek 188 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTL-------YSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEK 188 (399)
T ss_pred CCccEEEEecccccchhh-------HHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCce
Confidence 689999999998887663 4556789999999999999997654211111000 0000 00
Q ss_pred ----------CCchhHHHHHHHHHHc---------------------CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEE
Q 008274 412 ----------IDAEDQLTGAEWLIKQ---------------------GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC 460 (571)
Q Consensus 412 ----------~~~~D~~~~~~~l~~~---------------------~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~ 460 (571)
..++++..|++-+.+- +.+|..+++|+|||+||..++...+.+ ..|+|
T Consensus 189 ef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~Frc 267 (399)
T KOG3847|consen 189 EFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRC 267 (399)
T ss_pred eEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceee
Confidence 0134455555544331 124667899999999999999888854 57899
Q ss_pred EEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeE
Q 008274 461 AVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI 540 (571)
Q Consensus 461 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 540 (571)
+|+..+.. .|-+. .+..+++.|+|+|.-+ |.. -. ++....+++...+..-.+
T Consensus 268 aI~lD~WM---------------~Pl~~----------~~~~~arqP~~finv~-~fQ-~~-en~~vmKki~~~n~g~~~ 319 (399)
T KOG3847|consen 268 AIALDAWM---------------FPLDQ----------LQYSQARQPTLFINVE-DFQ-WN-ENLLVMKKIESQNEGNHV 319 (399)
T ss_pred eeeeeeee---------------cccch----------hhhhhccCCeEEEEcc-ccc-ch-hHHHHHHhhhCCCccceE
Confidence 99876431 01000 2345667899998833 222 22 334444555555566677
Q ss_pred EEcCCCCCCC-C---------------------CCCcHHHHHHHHHHHHHHhC
Q 008274 541 LIFPDERHMP-R---------------------RHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 541 ~~~~~~~H~~-~---------------------~~~~~~~~~~~i~~fl~~~l 571 (571)
+.+.|+=|.- . ..+......+..++||++|+
T Consensus 320 it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~ 372 (399)
T KOG3847|consen 320 ITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKHL 372 (399)
T ss_pred EEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhhh
Confidence 8888887741 0 01234556677888998874
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.5e-09 Score=94.19 Aligned_cols=130 Identities=18% Similarity=0.124 Sum_probs=87.7
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
..+.++..+|..++..-..-+.. +...+..+||-+||.|++-. .+.++...|.+.|+.++.+||||++....
T Consensus 7 ~~~k~~~~~~~~~~~~a~y~D~~-~~gs~~gTVv~~hGsPGSH~-------DFkYi~~~l~~~~iR~I~iN~PGf~~t~~ 78 (297)
T PF06342_consen 7 KLVKFQAENGKIVTVQAVYEDSL-PSGSPLGTVVAFHGSPGSHN-------DFKYIRPPLDEAGIRFIGINYPGFGFTPG 78 (297)
T ss_pred EEEEcccccCceEEEEEEEEecC-CCCCCceeEEEecCCCCCcc-------chhhhhhHHHHcCeEEEEeCCCCCCCCCC
Confidence 44566666665544443332221 11245679999999999854 35667889999999999999999876543
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCcc
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV 467 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~ 467 (571)
... ..+ .-.+-...++.|.++-.++ +++.++|||.|+-.|+.+++.+|- .++++.+|+
T Consensus 79 ~~~-~~~------~n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~~--~g~~lin~~ 136 (297)
T PF06342_consen 79 YPD-QQY------TNEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHPL--HGLVLINPP 136 (297)
T ss_pred Ccc-ccc------ChHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCcc--ceEEEecCC
Confidence 211 111 1344566667777664455 789999999999999999999863 455655553
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.8e-09 Score=97.82 Aligned_cols=231 Identities=15% Similarity=0.045 Sum_probs=137.5
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhC-------CcEEEEECCCCCC-CChhhh
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK-------GILVWKLDNRGTA-RRGLKF 401 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~-------G~~v~~~d~rG~~-~~~~~~ 401 (571)
..|.+..|.-.+. .+-.+|+++|+-.+++.........-.-+.+.+..- -|-||++|.-|++ ++...-
T Consensus 36 ~~vay~T~Gtln~----~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~ 111 (368)
T COG2021 36 ARVAYETYGTLNA----EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPS 111 (368)
T ss_pred cEEEEEecccccc----cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCC
Confidence 4454444443332 345799999997776654442211111123444444 4999999999875 332211
Q ss_pred H-HHHh----ccCCCCCchhHHHHHHHHHHcCCCcCCcE-EEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC------
Q 008274 402 E-ASIK----HNCGRIDAEDQLTGAEWLIKQGLAKVGHI-GLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS------ 469 (571)
Q Consensus 402 ~-~~~~----~~~~~~~~~D~~~~~~~l~~~~~~d~~~i-~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~------ 469 (571)
. ...- .......+.|++.+-+.|++.-.| +++ +|+|.||||+-++..+..+|+++..++.++...-
T Consensus 112 s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~i 189 (368)
T COG2021 112 SINPGGKPYGSDFPVITIRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNI 189 (368)
T ss_pred CcCCCCCccccCCCcccHHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHH
Confidence 1 1110 122334678888888888776444 344 4999999999999999999999888777665321
Q ss_pred ---------------cc---ccc----------------------chhhhhhcCCC----------CCChhhhc------
Q 008274 470 ---------------WD---GYD----------------------TFYTEKYMGLP----------SEDPVGYE------ 493 (571)
Q Consensus 470 ---------------~~---~~~----------------------~~~~~~~~g~~----------~~~~~~~~------ 493 (571)
|. ++. ..+.+++-... ....+.|.
T Consensus 190 a~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~k 269 (368)
T COG2021 190 AFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDK 269 (368)
T ss_pred HHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHH
Confidence 10 000 00111111100 00011110
Q ss_pred ------------------c-------CCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCC
Q 008274 494 ------------------Y-------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548 (571)
Q Consensus 494 ------------------~-------~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 548 (571)
. .+....+++++.|+|++.-+.|...|+++..++.+.|...+. -..+-...||
T Consensus 270 f~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~--~~~i~S~~GH 347 (368)
T COG2021 270 FVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA--LREIDSPYGH 347 (368)
T ss_pred HHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc--eEEecCCCCc
Confidence 0 122233777899999999999999999999999999977765 2234455689
Q ss_pred CCCCCCcHHHHHHHHHHHHHH
Q 008274 549 MPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 549 ~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.-. ......+.+.|.+||+.
T Consensus 348 DaF-L~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 348 DAF-LVESEAVGPLIRKFLAL 367 (368)
T ss_pred hhh-hcchhhhhHHHHHHhhc
Confidence 642 23445566788888764
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.4e-10 Score=118.64 Aligned_cols=128 Identities=17% Similarity=0.217 Sum_probs=89.1
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CC-cEEEEECCC-CCCCChhhhHHHHhcc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KG-ILVWKLDNR-GTARRGLKFEASIKHN 408 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G-~~v~~~d~r-G~~~~~~~~~~~~~~~ 408 (571)
+...+|.|.... ..+++||||++|||+........+ ....++. .+ ++|++++|| |..++...... ..
T Consensus 79 l~l~i~~p~~~~-~~~~~pv~v~ihGG~~~~g~~~~~------~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~ 148 (493)
T cd00312 79 LYLNVYTPKNTK-PGNSLPVMVWIHGGGFMFGSGSLY------PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---EL 148 (493)
T ss_pred CeEEEEeCCCCC-CCCCCCEEEEEcCCccccCCCCCC------ChHHHHhcCCCEEEEEecccccccccccCCCC---CC
Confidence 677788887531 236789999999997754422111 1234443 44 999999999 65444321111 12
Q ss_pred CCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc--CCCeeEEEEEcCccCC
Q 008274 409 CGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVTS 469 (571)
Q Consensus 409 ~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~--~~~~~~~~v~~~~~~~ 469 (571)
.+...+.|+..+++|+.+. ...|+++|.|+|+|+||+++..++.. .+.+|+++|+.+|...
T Consensus 149 ~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 149 PGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 2333478999999999875 34799999999999999999988875 2457999998877543
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-07 Score=97.13 Aligned_cols=244 Identities=14% Similarity=0.105 Sum_probs=143.0
Q ss_pred eEEECCCCCeEEEEEEeCCCCCeEEEee--c-CCC-------------CCCCCCcccccCCCCCCCCc------eEEEEE
Q 008274 27 GYWWSLDSKFIAFTQVDSSEIPRFRIMH--Q-GKS-------------SVGSEAQEDHAYPFAGASNV------KVRLGV 84 (571)
Q Consensus 27 ~~~wSPDg~~iay~~~~~~~~~~~~~~~--~-~~~-------------~~~~~~~~~~~y~~~g~~~~------~~~l~~ 84 (571)
.+.+||||++|||.....+. +.+.+.. . ++. -.+..+...+-|........ ...++.
T Consensus 128 ~~~~Spdg~~la~~~s~~G~-e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~ 206 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGS-EWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYR 206 (414)
T ss_dssp EEEETTTSSEEEEEEEETTS-SEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEE
T ss_pred eeeECCCCCEEEEEecCCCC-ceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEE
Confidence 56789999999996554433 2222211 0 000 00122333344433333222 467888
Q ss_pred EECCCCceE-EEeccCCCCCCCCCCce-eEEEEEccCCeEEEEEEeccCccEEEEEEECCCC-----ceEEEEEeecCCe
Q 008274 85 VSAAGGPVS-WMDLQCGGTDQNYDEEY-LARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTG-----QRKVILVEELDSW 157 (571)
Q Consensus 85 ~dl~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g-----~~~~l~~~~~~~w 157 (571)
+.+.++... .+-++ ...... ...+.+|+||++++..+.+....+.+|.+|...+ +.+.|........
T Consensus 207 ~~~gt~~~~d~lvfe------~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~ 280 (414)
T PF02897_consen 207 HKLGTPQSEDELVFE------EPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVE 280 (414)
T ss_dssp EETTS-GGG-EEEEC-------TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-E
T ss_pred EECCCChHhCeeEEe------ecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceE
Confidence 998887654 22222 112223 5678999999987776666655589999999986 5667766443322
Q ss_pred eeccCCcccCCCCCccCCCeEEEEEecCC-ccEEEEEeCCCce---ee-ceeecCeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 158 VNLHDCFTPLDKGVTKYSGGFIWASEKTG-FRHLYLHDINGTC---LG-PITEGDWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~~~~~s~~~g-~~~l~~~~~~~~~---~~-~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
... ...++.+++.+++++ ...|+.++++... .+ .|......+ .+..++..+++|++....++
T Consensus 281 ~~v-----------~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~-~l~~~~~~~~~Lvl~~~~~~- 347 (414)
T PF02897_consen 281 YYV-----------DHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDV-SLEDVSLFKDYLVLSYRENG- 347 (414)
T ss_dssp EEE-----------EEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSE-EEEEEEEETTEEEEEEEETT-
T ss_pred EEE-----------EccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCce-eEEEEEEECCEEEEEEEECC-
Confidence 110 113556888887744 5789999987654 22 333332211 12235667889999988776
Q ss_pred ceeEEEEEEeCCC-CCCCCCCCeEecC-CCce-EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 233 LESHLYCAKLYPD-WNHTLEAPVKLTN-GKGK-HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 233 ~~~~l~~~~l~~~-g~~~~~~~~~lt~-~~g~-~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
..+|..+++ . +. ....+.. ..|. ......++++.+.|.+++..+|+.+|.+++.+++.
T Consensus 348 -~~~l~v~~~--~~~~----~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~ 408 (414)
T PF02897_consen 348 -SSRLRVYDL--DDGK----ESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL 408 (414)
T ss_dssp -EEEEEEEET--T-TE----EEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred -ccEEEEEEC--CCCc----EEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence 488999998 4 33 2333333 2232 34455678999999999999999999999988874
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.3e-08 Score=101.42 Aligned_cols=210 Identities=14% Similarity=0.085 Sum_probs=123.5
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
+..+.++. + .+..+-|.|... ...+.|+|| |+..-.-..+.+- .+ -+.+.++|.++|+.|+++|.+.-+...
T Consensus 191 Pg~VV~~n-~--l~eLiqY~P~te--~v~~~PLLI-VPp~INK~YIlDL-~P-~~SlVr~lv~qG~~VflIsW~nP~~~~ 262 (560)
T TIGR01839 191 EGAVVFRN-E--VLELIQYKPITE--QQHARPLLV-VPPQINKFYIFDL-SP-EKSFVQYCLKNQLQVFIISWRNPDKAH 262 (560)
T ss_pred CCceeEEC-C--ceEEEEeCCCCC--CcCCCcEEE-echhhhhhheeec-CC-cchHHHHHHHcCCeEEEEeCCCCChhh
Confidence 44455554 2 244455677542 113446655 6664322221111 11 134589999999999999998644322
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHH----HHhcCCC-eeEEEEEcCccCCcccc
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAI----TLARFPD-VFQCAVSGAPVTSWDGY 473 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~----~~~~~~~-~~~~~v~~~~~~~~~~~ 473 (571)
..+. ..++ ++.+.++++.+.+.. ...+|.++|+|+||.+++. +++.+++ +++.++......|+...
T Consensus 263 r~~~---ldDY----v~~i~~Ald~V~~~t--G~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~ 333 (560)
T TIGR01839 263 REWG---LSTY----VDALKEAVDAVRAIT--GSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTME 333 (560)
T ss_pred cCCC---HHHH----HHHHHHHHHHHHHhc--CCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCC
Confidence 2111 1111 234566676666542 4578999999999999986 6677775 78888876665553210
Q ss_pred c-------------------------------------------chhhhhh-cCCCC--CC-------------------
Q 008274 474 D-------------------------------------------TFYTEKY-MGLPS--ED------------------- 488 (571)
Q Consensus 474 ~-------------------------------------------~~~~~~~-~g~~~--~~------------------- 488 (571)
. ..+...| +|... .+
T Consensus 334 g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~ 413 (560)
T TIGR01839 334 SPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDL 413 (560)
T ss_pred CcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHH
Confidence 0 0000011 11110 00
Q ss_pred hhhhccCCcc-----------hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 489 PVGYEYSSVM-----------HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 489 ~~~~~~~s~~-----------~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
.+.|..+... -.+.+|++|+|++.|+.|.++|...+..+.+.+ +.+.++++.++ ||.
T Consensus 414 l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~---gs~~~fvl~~g-GHI 481 (560)
T TIGR01839 414 LDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLL---GGKRRFVLSNS-GHI 481 (560)
T ss_pred HHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHc---CCCeEEEecCC-Ccc
Confidence 0112222221 136778999999999999999999999998866 55788888866 885
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.1e-08 Score=87.70 Aligned_cols=152 Identities=18% Similarity=0.104 Sum_probs=91.7
Q ss_pred EEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCC
Q 008274 352 LISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLA 430 (571)
Q Consensus 352 vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~ 430 (571)
|+++||..++.. +.|.. .+.+.+... +.|-.++.- ..++.+.+..|.+. ..+
T Consensus 1 v~IvhG~~~s~~--~HW~~---wl~~~l~~~-~~V~~~~~~---------------------~P~~~~W~~~l~~~i~~~ 53 (171)
T PF06821_consen 1 VLIVHGYGGSPP--DHWQP---WLERQLENS-VRVEQPDWD---------------------NPDLDEWVQALDQAIDAI 53 (171)
T ss_dssp EEEE--TTSSTT--TSTHH---HHHHHHTTS-EEEEEC--T---------------------S--HHHHHHHHHHCCHC-
T ss_pred CEEeCCCCCCCc--cHHHH---HHHHhCCCC-eEEeccccC---------------------CCCHHHHHHHHHHHHhhc
Confidence 578999766643 44543 335566655 677766551 12344455555554 223
Q ss_pred cCCcEEEEeechHHHHHHHHH-hcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEE
Q 008274 431 KVGHIGLYGWSYGGYLSAITL-ARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLL 509 (571)
Q Consensus 431 d~~~i~l~G~S~GG~~a~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~l 509 (571)
| +.+.++|||+|+..++.++ ......++++++++|+..-. .. .. ........+.. ...+..|.+
T Consensus 54 ~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~--------~~-~~----~~~~~~f~~~p-~~~l~~~~~ 118 (171)
T PF06821_consen 54 D-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDD--------PE-PF----PPELDGFTPLP-RDPLPFPSI 118 (171)
T ss_dssp T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGC--------HH-CC----TCGGCCCTTSH-CCHHHCCEE
T ss_pred C-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCccc--------cc-ch----hhhccccccCc-ccccCCCeE
Confidence 3 4599999999999999999 66788999999999984310 00 00 00111111111 123345669
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 510 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 510 li~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
++.+++|+.||++.+..+++++ ..+++.++++||..
T Consensus 119 viaS~nDp~vp~~~a~~~A~~l-----~a~~~~~~~~GHf~ 154 (171)
T PF06821_consen 119 VIASDNDPYVPFERAQRLAQRL-----GAELIILGGGGHFN 154 (171)
T ss_dssp EEEETTBSSS-HHHHHHHHHHH-----T-EEEEETS-TTSS
T ss_pred EEEcCCCCccCHHHHHHHHHHc-----CCCeEECCCCCCcc
Confidence 9999999999999999999988 35788999999975
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.9e-08 Score=86.22 Aligned_cols=126 Identities=19% Similarity=0.207 Sum_probs=89.7
Q ss_pred HHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhcc
Q 008274 418 LTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEY 494 (571)
Q Consensus 418 ~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 494 (571)
.+.+..|+++ ..++.+||++-|.|+||.+++.++..++.........+++..-. ...+-+.
T Consensus 75 a~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~------~~~~~~~---------- 138 (206)
T KOG2112|consen 75 ADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRA------SIGLPGW---------- 138 (206)
T ss_pred HHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccc------hhhccCC----------
Confidence 3344555543 45788999999999999999999998866555555555543200 0000000
Q ss_pred CCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 495 SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 495 ~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
-+ .. + .+|+++.||+.|+.||..-.+...+.|+..+.++++..|++.+|.... +-...+..|+.+
T Consensus 139 -~~--~~-~-~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~-----~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 139 -LP--GV-N-YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSP-----QELDDLKSWIKT 203 (206)
T ss_pred -cc--cc-C-cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccH-----HHHHHHHHHHHH
Confidence 00 00 1 679999999999999999999999999999999999999999998732 234567777765
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.91 E-value=4e-08 Score=93.96 Aligned_cols=125 Identities=17% Similarity=0.186 Sum_probs=94.2
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
..|.++|.++++.+++.- .-+.+..+.-|||||.++...+|- +|+.+|+++|.++.+.+.+.+--.+
T Consensus 382 D~l~iyd~~~~e~kr~e~---------~lg~I~av~vs~dGK~~vvaNdr~----el~vididngnv~~idkS~~~lItd 448 (668)
T COG4946 382 DKLGIYDKDGGEVKRIEK---------DLGNIEAVKVSPDGKKVVVANDRF----ELWVIDIDNGNVRLIDKSEYGLITD 448 (668)
T ss_pred ceEEEEecCCceEEEeeC---------CccceEEEEEcCCCcEEEEEcCce----EEEEEEecCCCeeEecccccceeEE
Confidence 368999999999888733 456788899999999888876555 5999999999999887655431111
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCc--cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcC
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGF--RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~--~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
+ .|++++ ++..+-.+|+ ++|-+++.++++.-.+|......-++ .++|||++|||.+.+
T Consensus 449 ------f-----~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsP-aFD~d~ryLYfLs~R 509 (668)
T COG4946 449 ------F-----DWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSP-AFDPDGRYLYFLSAR 509 (668)
T ss_pred ------E-----EEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCc-ccCCCCcEEEEEecc
Confidence 1 244554 6655666774 78899999999998888765444445 499999999999985
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.7e-09 Score=104.56 Aligned_cols=130 Identities=17% Similarity=0.210 Sum_probs=88.5
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCC-cEEEEECCCCC-CCC-h-hhhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG-ILVWKLDNRGT-ARR-G-LKFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~d~rG~-~~~-~-~~~~~~~~~ 407 (571)
|..-+|.|+. ..++.||||++|||..... ......++ ...|+++| ++||++|||-. -|+ . ..+. ....
T Consensus 80 L~LNIwaP~~---~a~~~PVmV~IHGG~y~~G--s~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~-~~~~ 151 (491)
T COG2272 80 LYLNIWAPEV---PAEKLPVMVYIHGGGYIMG--SGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLD-TEDA 151 (491)
T ss_pred eeEEeeccCC---CCCCCcEEEEEeccccccC--CCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhcc-cccc
Confidence 6777889982 2267899999999865433 12222333 57788888 99999999932 221 1 0010 0011
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc--CCCeeEEEEEcCccCC
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVTS 469 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~--~~~~~~~~v~~~~~~~ 469 (571)
......+.|++.+|+|+.+. ..-|++.|.|+|+|+||+.++.+++. ...+|+.+|+.+|...
T Consensus 152 ~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 152 FASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 11123489999999999875 44699999999999999999988874 2347888888777653
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=98.90 E-value=7e-09 Score=98.87 Aligned_cols=113 Identities=17% Similarity=0.206 Sum_probs=77.5
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhH-HHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQ-YLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~-~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
..|++|++||..++.. ..|. ..++. ++...+|.|+++|+++..... +..+.. +. ....+++...++++.+
T Consensus 35 ~~p~vilIHG~~~~~~--~~~~---~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~~-~~-~~v~~~la~~l~~L~~ 105 (275)
T cd00707 35 SRPTRFIIHGWTSSGE--ESWI---SDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAVN-NT-RVVGAELAKFLDFLVD 105 (275)
T ss_pred CCCcEEEEcCCCCCCC--CcHH---HHHHHHHHhcCCCEEEEEECccccccC--hHHHHH-hH-HHHHHHHHHHHHHHHH
Confidence 4588999999766531 2332 22233 344568999999999863222 111111 00 0013567788888877
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS 469 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~ 469 (571)
...++.+++.++|||+||+++..++.+.|++++.++..+|...
T Consensus 106 ~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 106 NTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred hcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 6445778999999999999999999999999999999887653
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=6.4e-08 Score=92.00 Aligned_cols=195 Identities=17% Similarity=0.156 Sum_probs=108.9
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhC--CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
|.|+++||.+.... .|.. ....+... .|.++.+|.||+|.+. .. ..........+..+.+.
T Consensus 22 ~~i~~~hg~~~~~~---~~~~----~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---------~~~~~~~~~~~~~~~~~ 84 (282)
T COG0596 22 PPLVLLHGFPGSSS---VWRP----VFKVLPALAARYRVIAPDLRGHGRSD-PA---------GYSLSAYADDLAALLDA 84 (282)
T ss_pred CeEEEeCCCCCchh---hhHH----HHHHhhccccceEEEEecccCCCCCC-cc---------cccHHHHHHHHHHHHHH
Confidence 58899999887644 2221 11222221 1999999999998775 00 00111112233333332
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC------------ccc-c------cchh-----hh----
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS------------WDG-Y------DTFY-----TE---- 479 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~------------~~~-~------~~~~-----~~---- 479 (571)
- ...++.++|||+||.++..++.++|+++++++..++... ... . .... ..
T Consensus 85 ~--~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T COG0596 85 L--GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAA 162 (282)
T ss_pred h--CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhc
Confidence 1 223499999999999999999999999999888775432 000 0 0000 00
Q ss_pred hh-cCC---------CCCCh----hhh-------c------------cCCcchhhccCCCcEEEEecCCCCCCChHHHHH
Q 008274 480 KY-MGL---------PSEDP----VGY-------E------------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTAR 526 (571)
Q Consensus 480 ~~-~g~---------~~~~~----~~~-------~------------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~ 526 (571)
.. ... ..... ... . .........++.+|+++++|++|...+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~ 242 (282)
T COG0596 163 LGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARR 242 (282)
T ss_pred ccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHH
Confidence 00 000 00000 000 0 000112244456899999999996666554334
Q ss_pred HHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 527 LINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 527 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
+.+.+.. ..++.++++++|... .++...+.+.+.+|+
T Consensus 243 ~~~~~~~---~~~~~~~~~~gH~~~-~~~p~~~~~~i~~~~ 279 (282)
T COG0596 243 LAAALPN---DARLVVIPGAGHFPH-LEAPEAFAAALLAFL 279 (282)
T ss_pred HHhhCCC---CceEEEeCCCCCcch-hhcHHHHHHHHHHHH
Confidence 4333211 479999999999873 344556777777744
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.8e-08 Score=87.94 Aligned_cols=181 Identities=15% Similarity=0.134 Sum_probs=114.0
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccC
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNC 409 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~ 409 (571)
.+.+..++.|... +.+|+|+++||..-. ...|..+.+.+++.||+|++|+.-.... .-
T Consensus 31 pPkpLlI~tP~~~----G~yPVilF~HG~~l~-------ns~Ys~lL~HIASHGfIVVAPQl~~~~~-----------p~ 88 (307)
T PF07224_consen 31 PPKPLLIVTPSEA----GTYPVILFLHGFNLY-------NSFYSQLLAHIASHGFIVVAPQLYTLFP-----------PD 88 (307)
T ss_pred CCCCeEEecCCcC----CCccEEEEeechhhh-------hHHHHHHHHHHhhcCeEEEechhhcccC-----------CC
Confidence 4466777888653 689999999994322 2235566788899999999999763211 11
Q ss_pred CCCCchhHHHHHHHHHHc--------CCCcCCcEEEEeechHHHHHHHHHhcCC--CeeEEEEEcCccCCcccccchhhh
Q 008274 410 GRIDAEDQLTGAEWLIKQ--------GLAKVGHIGLYGWSYGGYLSAITLARFP--DVFQCAVSGAPVTSWDGYDTFYTE 479 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~--------~~~d~~~i~l~G~S~GG~~a~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~ 479 (571)
+..++++..+.++||.+. -..+..+++++|||.||..|..+|+.+. -.|.+.|.+.|+..........
T Consensus 89 ~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t~-- 166 (307)
T PF07224_consen 89 GQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQTP-- 166 (307)
T ss_pred chHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCCC--
Confidence 223466777888888653 1246789999999999999999998763 2478888888886532211110
Q ss_pred hhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCC-------CCCCh--HHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 480 KYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMID-------ENVHF--RHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 480 ~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D-------~~v~~--~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
|. .-.|. | +--++..|+++|...-- .-+.+ -+-+++++.. ..++...+-.+-||.
T Consensus 167 -----P~--iLty~---p--~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eC---k~p~~hfV~~dYGHm 230 (307)
T PF07224_consen 167 -----PP--ILTYV---P--QSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNEC---KPPCAHFVAKDYGHM 230 (307)
T ss_pred -----CC--eeecC---C--cccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhh---cccceeeeecccccc
Confidence 00 01111 1 11244578888865433 11111 2456676665 455666677777885
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.8e-08 Score=85.93 Aligned_cols=177 Identities=16% Similarity=0.127 Sum_probs=103.8
Q ss_pred hhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-C-CCcCCcEEEEeechHHHHHHHHHh
Q 008274 375 RAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-G-LAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 375 ~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~-~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+...|.. -+.++.+.++|.+..-. .....|+.+.++.+..+ . ..-....+++||||||.+|.-++.
T Consensus 26 W~~~lp~-~iel~avqlPGR~~r~~-----------ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvAr 93 (244)
T COG3208 26 WSRRLPA-DIELLAVQLPGRGDRFG-----------EPLLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVAR 93 (244)
T ss_pred HHhhCCc-hhheeeecCCCcccccC-----------CcccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHH
Confidence 3444433 58999999998765421 12256777777777664 2 233458999999999999988875
Q ss_pred cC------CCeeEEEEEcCccCCcccc-----cchhhh---hhcCCCC---CChhhhccC-----------Ccchh--hc
Q 008274 453 RF------PDVFQCAVSGAPVTSWDGY-----DTFYTE---KYMGLPS---EDPVGYEYS-----------SVMHH--VH 502 (571)
Q Consensus 453 ~~------~~~~~~~v~~~~~~~~~~~-----~~~~~~---~~~g~~~---~~~~~~~~~-----------s~~~~--~~ 502 (571)
+. |..+-.....+|..+.... +..+.+ .+-|.|. ++++...-. .-+.. -.
T Consensus 94 rl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~ 173 (244)
T COG3208 94 RLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPPPA 173 (244)
T ss_pred HHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCC
Confidence 42 2112222223342221110 111111 2224442 233322111 11111 13
Q ss_pred cCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 503 KMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 503 ~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.+.+|+.++.|++|..|..++...+.+.. +..+++.+|+| ||.+. .++.+.+.+.+.+.+.
T Consensus 174 pl~~pi~~~~G~~D~~vs~~~~~~W~~~t---~~~f~l~~fdG-gHFfl-~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 174 PLACPIHAFGGEKDHEVSRDELGAWREHT---KGDFTLRVFDG-GHFFL-NQQREEVLARLEQHLA 234 (244)
T ss_pred CcCcceEEeccCcchhccHHHHHHHHHhh---cCCceEEEecC-cceeh-hhhHHHHHHHHHHHhh
Confidence 56789999999999999877776666554 56899999988 99873 3555566666666553
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.84 E-value=4.6e-08 Score=92.70 Aligned_cols=223 Identities=20% Similarity=0.270 Sum_probs=130.0
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH--HHHh--
Q 008274 331 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE--ASIK-- 406 (571)
Q Consensus 331 ~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~--~~~~-- 406 (571)
..+..++.|..- ..+..|++|++.|.+.. .|..+...++.-|.+.|++.+.+..+-+|.+-.... +...
T Consensus 76 ~a~~~~~~P~~~--~~~~rp~~IhLagTGDh-----~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~V 148 (348)
T PF09752_consen 76 TARFQLLLPKRW--DSPYRPVCIHLAGTGDH-----GFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNV 148 (348)
T ss_pred heEEEEEECCcc--ccCCCceEEEecCCCcc-----chhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccch
Confidence 355666777653 12467999999885432 122233444777888899999998775543321110 0000
Q ss_pred ---ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC--------------C
Q 008274 407 ---HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT--------------S 469 (571)
Q Consensus 407 ---~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~--------------~ 469 (571)
-.++...+.+....++|+.++++ .+++|.|.||||.+|..+++..|..+.++-..++.+ +
T Consensus 149 sDl~~~g~~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~ 225 (348)
T PF09752_consen 149 SDLFVMGRATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSIN 225 (348)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCC
Confidence 01122235677778899988853 589999999999999999999988765555444322 2
Q ss_pred cccccc-----hhhhhhcCCCCC--------------Chhh----hccCCcchhhccCCC-----cEEEEecCCCCCCCh
Q 008274 470 WDGYDT-----FYTEKYMGLPSE--------------DPVG----YEYSSVMHHVHKMKG-----KLLLVHGMIDENVHF 521 (571)
Q Consensus 470 ~~~~~~-----~~~~~~~g~~~~--------------~~~~----~~~~s~~~~~~~~~~-----p~lli~G~~D~~v~~ 521 (571)
|..... .|.+.....+.. +.+. .....-..++.++.+ .+.++.+++|..||.
T Consensus 226 W~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr 305 (348)
T PF09752_consen 226 WDALEKQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPR 305 (348)
T ss_pred HHHHHHHhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEech
Confidence 221111 111110000000 0000 000111223444433 478899999999998
Q ss_pred HHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 522 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.+...|.+.. ..++++.+++ ||--..-.+...+.+.|.+=|+
T Consensus 306 ~~v~~Lq~~W----PGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 306 HGVLSLQEIW----PGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred hhcchHHHhC----CCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 8776665554 5677778877 9964444456667777776554
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.82 E-value=8e-09 Score=95.18 Aligned_cols=184 Identities=18% Similarity=0.176 Sum_probs=118.1
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
-+...+.+.||.++......-.....+ ....+||.+-|..+...+. .+..-++.||.|+.++++|.+++.
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n~~~-ngq~LvIC~EGNAGFYEvG---------~m~tP~~lgYsvLGwNhPGFagST 283 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPNQSG-NGQDLVICFEGNAGFYEVG---------VMNTPAQLGYSVLGWNHPGFAGST 283 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCCCCC-CCceEEEEecCCccceEee---------eecChHHhCceeeccCCCCccccC
Confidence 456788888999898877654332222 2346889999976655431 134556889999999999998775
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhh
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYT 478 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 478 (571)
+-.. ...+...+.+.+++.+..-....+.|.+.|||-||+-++++|..+|+. +++|+.+.+-|.........
T Consensus 284 G~P~-------p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdV-kavvLDAtFDDllpLAl~rM 355 (517)
T KOG1553|consen 284 GLPY-------PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDV-KAVVLDATFDDLLPLALFRM 355 (517)
T ss_pred CCCC-------cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCc-eEEEeecchhhhhhHHhhhc
Confidence 3211 112345566777787776334667899999999999999999999986 89998887766432211100
Q ss_pred hhhc-CCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCC
Q 008274 479 EKYM-GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVH 520 (571)
Q Consensus 479 ~~~~-g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~ 520 (571)
...+ |.-......+-.-+..+.+.+.+.|+++|--++|+++.
T Consensus 356 P~~~~giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIit 398 (517)
T KOG1553|consen 356 PTFFSGIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIIT 398 (517)
T ss_pred hHHHHHHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhh
Confidence 0000 00000001111122334567778899999998887764
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.4e-08 Score=89.72 Aligned_cols=175 Identities=17% Similarity=0.075 Sum_probs=89.7
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC--CChhh---------h-HHHHhccCCC----
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA--RRGLK---------F-EASIKHNCGR---- 411 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~--~~~~~---------~-~~~~~~~~~~---- 411 (571)
+++-||++||...+.. -|..+...+...|.+.++..+.+|.+-.. +.+-. . .......|..
T Consensus 3 ~k~riLcLHG~~~na~---if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE---IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD 79 (212)
T ss_dssp ---EEEEE--TT--HH---HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-
T ss_pred CCceEEEeCCCCcCHH---HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC
Confidence 3578999999877654 34445555566666658999999876322 11100 0 1111122222
Q ss_pred -CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC--------CCeeEEEEEcCccCCcccccchhhhhhc
Q 008274 412 -IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF--------PDVFQCAVSGAPVTSWDGYDTFYTEKYM 482 (571)
Q Consensus 412 -~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--------~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 482 (571)
....++.++++++.+.-.-+..-.+|+|+|.||.+|..++... ...|+.+|..+++...... +.
T Consensus 80 ~~~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---~~---- 152 (212)
T PF03959_consen 80 DHEYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---YQ---- 152 (212)
T ss_dssp SGGG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE----GT----
T ss_pred cccccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh---hh----
Confidence 1245666777666553100122478999999999998887531 2357888888876532110 00
Q ss_pred CCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 483 GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 483 g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
+.+ ...+|++|+|-++|++|..++.+.++.+++.+... .+++..++ ||.+
T Consensus 153 -------~~~-------~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~g-GH~v 202 (212)
T PF03959_consen 153 -------ELY-------DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHDG-GHHV 202 (212)
T ss_dssp -------TTT---------TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEESS-SSS-
T ss_pred -------hhh-------ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEECC-CCcC
Confidence 001 24557899999999999999999999999988764 67777766 8876
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.80 E-value=8.4e-09 Score=109.68 Aligned_cols=127 Identities=19% Similarity=0.196 Sum_probs=82.5
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC----CCChhhhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT----ARRGLKFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~----~~~~~~~~~~~~~ 407 (571)
|..-+|.|..... ..++||+|++|||....... . .........+++++++||+++||-. -..+.. . ..
T Consensus 109 L~LnI~~P~~~~~-~~~lPV~v~ihGG~f~~G~~-~--~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~-~--~~- 180 (535)
T PF00135_consen 109 LYLNIYTPSNASS-NSKLPVMVWIHGGGFMFGSG-S--FPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDL-D--AP- 180 (535)
T ss_dssp -EEEEEEETSSSS-TTSEEEEEEE--STTTSSCT-T--SGGGHTHHHHHHHTSEEEEE----HHHHH-BSSST-T--SH-
T ss_pred HHHhhhhcccccc-ccccceEEEeecccccCCCc-c--cccccccccccCCCEEEEEeccccccccccccccc-c--cC-
Confidence 7778899987532 23799999999987765422 0 0112234567789999999999931 111100 0 00
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCcc
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPV 467 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~ 467 (571)
.+...+.|+..|++|+.+. ..-|+++|.|+|+|+||..+...+... ..+|+.+|+.+|.
T Consensus 181 -~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 181 -SGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp -BSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred -chhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 1334488999999999886 345999999999999999998887652 3689999998873
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=98.80 E-value=9e-07 Score=85.32 Aligned_cols=210 Identities=10% Similarity=0.042 Sum_probs=107.6
Q ss_pred eEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCC
Q 008274 27 GYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNY 106 (571)
Q Consensus 27 ~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~ 106 (571)
...|++||++|.|.+..++. .+||++||++++.++|+-. +
T Consensus 40 ~~~ft~dG~kllF~s~~dg~---------------------------------~nly~lDL~t~~i~QLTdg-------~ 79 (386)
T PF14583_consen 40 QNCFTDDGRKLLFASDFDGN---------------------------------RNLYLLDLATGEITQLTDG-------P 79 (386)
T ss_dssp S--B-TTS-EEEEEE-TTSS----------------------------------EEEEEETTT-EEEE---S-------S
T ss_pred CCCcCCCCCEEEEEeccCCC---------------------------------cceEEEEcccCEEEECccC-------C
Confidence 34589999999996543222 3789999999999999763 1
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EE-EE-Ee
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FI-WA-SE 183 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~-~~-s~ 183 (571)
.+... ...+||+++.++++.+.. .|+.+|++|++.+.|+..++. |...+ .+.. ..|. .+ .+ ..
T Consensus 80 g~~~~-g~~~s~~~~~~~Yv~~~~----~l~~vdL~T~e~~~vy~~p~~-~~g~g-t~v~-------n~d~t~~~g~e~~ 145 (386)
T PF14583_consen 80 GDNTF-GGFLSPDDRALYYVKNGR----SLRRVDLDTLEERVVYEVPDD-WKGYG-TWVA-------NSDCTKLVGIEIS 145 (386)
T ss_dssp -B-TT-T-EE-TTSSEEEEEETTT----EEEEEETTT--EEEEEE--TT-EEEEE-EEEE--------TTSSEEEEEEEE
T ss_pred CCCcc-ceEEecCCCeEEEEECCC----eEEEEECCcCcEEEEEECCcc-ccccc-ceee-------CCCccEEEEEEEe
Confidence 12111 357899999887765432 499999999999998876543 43211 0111 1122 22 11 11
Q ss_pred c-C--------C---------ccEEEEEeCCCceeeceeecCeEEEEEEEEee-cCcEEEEEEcC-CCCceeEEEEEEeC
Q 008274 184 K-T--------G---------FRHLYLHDINGTCLGPITEGDWMVEQIVGVNE-ASGQVYFTGTL-DGPLESHLYCAKLY 243 (571)
Q Consensus 184 ~-~--------g---------~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~-dg~~l~~~~~~-~~~~~~~l~~~~l~ 243 (571)
+ + + ...|+.+++.+++.+.|-....-...+. +|| |...|.|.-.- .+.....++.++.
T Consensus 146 ~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~-fsP~dp~li~fCHEGpw~~Vd~RiW~i~~- 223 (386)
T PF14583_consen 146 REDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQ-FSPTDPTLIMFCHEGPWDLVDQRIWTINT- 223 (386)
T ss_dssp GGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEE-EETTEEEEEEEEE-S-TTTSS-SEEEEET-
T ss_pred ehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcc-cCCCCCCEEEEeccCCcceeceEEEEEEc-
Confidence 1 1 1 2588999999999887766544455554 555 45667776542 2333468999997
Q ss_pred CCCCCCCCCCeEecC---CCceEEEEECCCCCEEEEEeeCCCC-CCEEEEEEcCCCce
Q 008274 244 PDWNHTLEAPVKLTN---GKGKHVAVLDHNMRNFVDFHDSLDS-PPRILLCSLQDGSL 297 (571)
Q Consensus 244 ~~g~~~~~~~~~lt~---~~g~~~~~~s~~g~~~v~~~s~~~~-p~~l~~~~~~~~~~ 297 (571)
+|+ ..+.+.. ++....-.|++||+.+.|....+.+ .--|+.+++.+++.
T Consensus 224 -dg~----~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~ 276 (386)
T PF14583_consen 224 -DGS----NVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGER 276 (386)
T ss_dssp -TS-------EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--E
T ss_pred -CCC----cceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCc
Confidence 665 3333332 2222233899999999996543332 33455566665543
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=98.73 E-value=5.2e-08 Score=97.14 Aligned_cols=113 Identities=17% Similarity=0.177 Sum_probs=75.1
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHH--hCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR--SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~--~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
..|++|++||...+.. ...|.. .+...|. ...+.|+++|++|++.+... .+. .+ .....+++.+.+++|.
T Consensus 40 ~~ptvIlIHG~~~s~~-~~~w~~---~l~~al~~~~~d~nVI~VDw~g~g~s~y~--~a~-~~-t~~vg~~la~lI~~L~ 111 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGM-FESWVP---KLVAALYEREPSANVIVVDWLSRAQQHYP--TSA-AY-TKLVGKDVAKFVNWMQ 111 (442)
T ss_pred CCCeEEEECCCCcCCc-chhhHH---HHHHHHHhccCCCEEEEEECCCcCCCCCc--ccc-cc-HHHHHHHHHHHHHHHH
Confidence 3488899999755321 122321 1233333 23699999999988754311 110 00 0111356677788876
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
++..++.+++.|+|||+||++|..++...|.++..++..+|..
T Consensus 112 ~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 112 EEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred HhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 6544577899999999999999999998999999999988864
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.5e-07 Score=87.64 Aligned_cols=198 Identities=20% Similarity=0.183 Sum_probs=115.2
Q ss_pred EEEEEc-CCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC--CChhhhHHHHhccC
Q 008274 333 YGALYK-PDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA--RRGLKFEASIKHNC 409 (571)
Q Consensus 333 ~~~~~~-P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~--~~~~~~~~~~~~~~ 409 (571)
..|+.. |... .++.-|+||++|||+........--.....+...+ + ..+++..||.-.. ..+..+..+
T Consensus 107 s~Wlvk~P~~~--~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~~~~~~~yPtQ----- 177 (374)
T PF10340_consen 107 SYWLVKAPNRF--KPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSSDEHGHKYPTQ----- 177 (374)
T ss_pred eEEEEeCCccc--CCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEeccccccccCCCcCchH-----
Confidence 367776 6552 23445999999998765432211100111112222 3 5589999997543 222222222
Q ss_pred CCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc--CC---CeeEEEEEcCccCCccccc----------
Q 008274 410 GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR--FP---DVFQCAVSGAPVTSWDGYD---------- 474 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~--~~---~~~~~~v~~~~~~~~~~~~---------- 474 (571)
+.++.+..++|.+.. ..+.|.++|-|+||.+++.++.. ++ ..-+.+|+++|.++.....
T Consensus 178 ----L~qlv~~Y~~Lv~~~--G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n 251 (374)
T PF10340_consen 178 ----LRQLVATYDYLVESE--GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDN 251 (374)
T ss_pred ----HHHHHHHHHHHHhcc--CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCcccccc
Confidence 567899999999442 24689999999999999877642 11 1247899999987654110
Q ss_pred -----------chhhhhhcCCCCCChhhhccCCcc---------hhhcc-C-CCcEEEEecCCCCCCChHHHHHHHHHHH
Q 008274 475 -----------TFYTEKYMGLPSEDPVGYEYSSVM---------HHVHK-M-KGKLLLVHGMIDENVHFRHTARLINALV 532 (571)
Q Consensus 475 -----------~~~~~~~~g~~~~~~~~~~~~s~~---------~~~~~-~-~~p~lli~G~~D~~v~~~~~~~~~~~l~ 532 (571)
..+.+.|.+.- +++......|. ..-.. + ++.++++.|+.+-.. .+.+++++.+.
T Consensus 252 ~~~D~l~~~~~~~~~~~y~~~~--~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evfr--ddI~~~~~~~~ 327 (374)
T PF10340_consen 252 EKRDMLSYKGLSMFGDAYIGNN--DPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVFR--DDILEWAKKLN 327 (374)
T ss_pred ccccccchhhHHHHHHhhcccc--ccccccccCCccCcccCCChhHHHHhccCCcEEEEECCccccH--HHHHHHHHHHh
Confidence 01222333320 01000001110 01111 1 258999999987664 47888999988
Q ss_pred HcCC-----CeeEEEcCCCCCC
Q 008274 533 AARK-----PYEILIFPDERHM 549 (571)
Q Consensus 533 ~~~~-----~~~~~~~~~~~H~ 549 (571)
..+. ...+.+.+++.|.
T Consensus 328 ~~~~~~~~~~~nv~~~~~G~Hi 349 (374)
T PF10340_consen 328 DVKPNKFSNSNNVYIDEGGIHI 349 (374)
T ss_pred hcCccccCCcceEEEecCCccc
Confidence 6553 3677788888895
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.9e-06 Score=75.49 Aligned_cols=152 Identities=14% Similarity=0.146 Sum_probs=89.2
Q ss_pred CceEEECCCCCeEEEEEEeC-CCC-CeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDS-SEI-PRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.-.+-|+|+|++|+.....+ ... ..+. +...|+.++..+.....+.+.
T Consensus 8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~--------------------------~~~~l~~~~~~~~~~~~i~l~---- 57 (194)
T PF08662_consen 8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYY--------------------------GEFELFYLNEKNIPVESIELK---- 57 (194)
T ss_pred eEEEEecccCCEEEEEEEEeeccCcceEE--------------------------eeEEEEEEecCCCccceeecc----
Confidence 45688999999999876521 111 1110 124688888887777666553
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWA 181 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~ 181 (571)
....+.+++|+|+|+.++.+...... .|.++|+++. .+..-..... + ...|+|++ ++++
T Consensus 58 ----~~~~I~~~~WsP~g~~favi~g~~~~--~v~lyd~~~~---~i~~~~~~~~-n----------~i~wsP~G~~l~~ 117 (194)
T PF08662_consen 58 ----KEGPIHDVAWSPNGNEFAVIYGSMPA--KVTLYDVKGK---KIFSFGTQPR-N----------TISWSPDGRFLVL 117 (194)
T ss_pred ----CCCceEEEEECcCCCEEEEEEccCCc--ccEEEcCccc---EeEeecCCCc-e----------EEEECCCCCEEEE
Confidence 34468899999999977766543323 4666677532 2222111111 1 11456666 6665
Q ss_pred EecCC-ccEEEEEeCCCceeeceee-cCeEEEEEEEEeecCcEEEEEEcC
Q 008274 182 SEKTG-FRHLYLHDINGTCLGPITE-GDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 182 s~~~g-~~~l~~~~~~~~~~~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
+.-.+ ...|.++|....+. +.. ....+..+ .|||||+++...++.
T Consensus 118 ~g~~n~~G~l~~wd~~~~~~--i~~~~~~~~t~~-~WsPdGr~~~ta~t~ 164 (194)
T PF08662_consen 118 AGFGNLNGDLEFWDVRKKKK--ISTFEHSDATDV-EWSPDGRYLATATTS 164 (194)
T ss_pred EEccCCCcEEEEEECCCCEE--eeccccCcEEEE-EEcCCCCEEEEEEec
Confidence 54322 24677888765433 322 22234444 599999999988763
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.3e-06 Score=81.85 Aligned_cols=133 Identities=17% Similarity=0.086 Sum_probs=85.3
Q ss_pred CchhHHHHHHHHHHcCCC--cCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC--ccc-ccc--hhh------h
Q 008274 413 DAEDQLTGAEWLIKQGLA--KVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS--WDG-YDT--FYT------E 479 (571)
Q Consensus 413 ~~~D~~~~~~~l~~~~~~--d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~--~~~-~~~--~~~------~ 479 (571)
.+.|++.|+.++.+.-.. +.-++.++|+|+|||++..++--.|..|.+++-.++... |.. +.. .|. +
T Consensus 162 qAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~ 241 (403)
T PF11144_consen 162 QAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGE 241 (403)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCccccccccc
Confidence 466888888888886221 234899999999999999999888999999988765432 110 000 000 0
Q ss_pred h----------hcCCCCC---------ChhhhccCCcc--hh---hccC--CCcEEEEecCCCCCCChHHHHHHHHHHHH
Q 008274 480 K----------YMGLPSE---------DPVGYEYSSVM--HH---VHKM--KGKLLLVHGMIDENVHFRHTARLINALVA 533 (571)
Q Consensus 480 ~----------~~g~~~~---------~~~~~~~~s~~--~~---~~~~--~~p~lli~G~~D~~v~~~~~~~~~~~l~~ 533 (571)
. +.-+.|. ..+.+.-.+.+ .+ ..+. ++-...+|+..|+.+|.+.-.+|++.+++
T Consensus 242 ~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~ 321 (403)
T PF11144_consen 242 FFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKN 321 (403)
T ss_pred ccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHH
Confidence 0 0011111 11111111111 11 1222 24567889999999999999999999999
Q ss_pred cCCCeeEEEcCC
Q 008274 534 ARKPYEILIFPD 545 (571)
Q Consensus 534 ~~~~~~~~~~~~ 545 (571)
+|-++++.++.+
T Consensus 322 lgfda~l~lIkd 333 (403)
T PF11144_consen 322 LGFDATLHLIKD 333 (403)
T ss_pred cCCCeEEEEecC
Confidence 999999998843
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.7e-07 Score=85.74 Aligned_cols=192 Identities=15% Similarity=0.120 Sum_probs=114.9
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHH---hCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHH-HHH
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLR---SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGA-EWL 424 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~l 424 (571)
.++++++.|.||... .|..+...|. ...+.|+++.+.|+......-... .+.....++|+++.. +++
T Consensus 2 ~~li~~IPGNPGlv~-------fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~--~~~~~~sL~~QI~hk~~~i 72 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE-------FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFS--PNGRLFSLQDQIEHKIDFI 72 (266)
T ss_pred cEEEEEECCCCChHH-------HHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccccc--CCCCccCHHHHHHHHHHHH
Confidence 478999999999754 2334455565 358999999999986554321000 122334466665443 333
Q ss_pred HHc---CCCcCCcEEEEeechHHHHHHHHHhcCC---CeeEEEEEcCccCCccc-----------------------c--
Q 008274 425 IKQ---GLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPVTSWDG-----------------------Y-- 473 (571)
Q Consensus 425 ~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~---~~~~~~v~~~~~~~~~~-----------------------~-- 473 (571)
.+. ......++.++|||.|+++++.++-+.+ ..+..++..-|...... .
T Consensus 73 ~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~~~~~~~~~~~~~ 152 (266)
T PF10230_consen 73 KELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFSPPPLVWLASFLS 152 (266)
T ss_pred HHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHHHHhhccHHHHHHHHHH
Confidence 222 1114678999999999999999999988 66777777777542100 0
Q ss_pred ------cc----hhhhhhcCCCCCC----------h-----------hhh---ccCCcchhhccC---CCcEEEEecCCC
Q 008274 474 ------DT----FYTEKYMGLPSED----------P-----------VGY---EYSSVMHHVHKM---KGKLLLVHGMID 516 (571)
Q Consensus 474 ------~~----~~~~~~~g~~~~~----------~-----------~~~---~~~s~~~~~~~~---~~p~lli~G~~D 516 (571)
.. +.....++.+... + +.+ .+.+.....+.. ..++.++.|.+|
T Consensus 153 ~l~~~lP~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~~~kl~f~fg~~D 232 (266)
T PF10230_consen 153 FLLSLLPESVLRWLVRWVMGFPPPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNENGDKLWFYFGQND 232 (266)
T ss_pred HHHHHCCHHHHHHHHHHHcCCChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccCCCEEEEEEeCCC
Confidence 00 0011122333110 0 000 000101111222 568999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 517 ENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 517 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
..||.+..+++.+++.....++.+.. ++..|+|
T Consensus 233 ~Wvp~~~~~~l~~~~~~~~~~~~v~~-~~i~HaF 265 (266)
T PF10230_consen 233 HWVPNETRDELIERYPGHEPDVVVDE-EGIPHAF 265 (266)
T ss_pred CCCCHHHHHHHHHHcCCCCCeEEEec-CCCCCCC
Confidence 99999998998888764445555555 7778876
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=9e-07 Score=76.48 Aligned_cols=115 Identities=21% Similarity=0.174 Sum_probs=74.3
Q ss_pred CcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC-cccccchhhhhhcCCCCCChhhhccCCcchhhcc--CC--Cc
Q 008274 433 GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS-WDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHK--MK--GK 507 (571)
Q Consensus 433 ~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~--~~--~p 507 (571)
++++|+|.|+||+.|.+++.++. .+ +|++.|... +.. ...+.|.+.. |....+ .+++. ++ ..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~~-aVLiNPAv~P~~~-----L~~~ig~~~~----y~~~~~-~h~~eL~~~~p~r 126 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--IR-QVIFNPNLFPEEN-----MEGKIDRPEE----YADIAT-KCVTNFREKNRDR 126 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--CC-EEEECCCCChHHH-----HHHHhCCCcc----hhhhhH-HHHHHhhhcCccc
Confidence 46999999999999999999875 23 455555543 221 1223332211 221111 11222 22 35
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 508 LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 508 ~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++++..+.|++.+..++.+.+.. -.+..+.+|++|.|. +.+.....|++|+.+
T Consensus 127 ~~vllq~gDEvLDyr~a~~~y~~------~y~~~v~~GGdH~f~---~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEELHP------YYEIVWDEEQTHKFK---NISPHLQRIKAFKTL 179 (180)
T ss_pred EEEEEeCCCcccCHHHHHHHhcc------CceEEEECCCCCCCC---CHHHHHHHHHHHHhc
Confidence 79999999999998877665532 125779999999984 467788999999853
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.2e-07 Score=89.35 Aligned_cols=78 Identities=27% Similarity=0.366 Sum_probs=62.7
Q ss_pred hccCCcchhhccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCc--HHHHHHHHHHHHH
Q 008274 492 YEYSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRD--RIYMEERIWEFIE 568 (571)
Q Consensus 492 ~~~~s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~--~~~~~~~i~~fl~ 568 (571)
+...++...+.++. +|+|++||.+|..||...+..++++.... +.+...+++++|....... ......++.+||.
T Consensus 218 ~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~ 295 (299)
T COG1073 218 LLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLE 295 (299)
T ss_pred hccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHHHHH
Confidence 45556666777787 69999999999999999999999887554 6788889999998754333 3478899999999
Q ss_pred HhC
Q 008274 569 RTL 571 (571)
Q Consensus 569 ~~l 571 (571)
++|
T Consensus 296 ~~l 298 (299)
T COG1073 296 RHL 298 (299)
T ss_pred Hhc
Confidence 875
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.6e-06 Score=73.75 Aligned_cols=167 Identities=18% Similarity=0.245 Sum_probs=104.8
Q ss_pred hhhhHHHHhCCcEEEEECCCCCCCChhhhHH-HHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHH
Q 008274 373 DMRAQYLRSKGILVWKLDNRGTARRGLKFEA-SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITL 451 (571)
Q Consensus 373 ~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~ 451 (571)
...+..|+++|+.|+.+|-+- -|.+ ..+. ....|+..++++..++- ..+++.|+|.|+|+-+.-.+.
T Consensus 19 ~~~a~~l~~~G~~VvGvdsl~------Yfw~~rtP~----~~a~Dl~~~i~~y~~~w--~~~~vvLiGYSFGADvlP~~~ 86 (192)
T PF06057_consen 19 KQIAEALAKQGVPVVGVDSLR------YFWSERTPE----QTAADLARIIRHYRARW--GRKRVVLIGYSFGADVLPFIY 86 (192)
T ss_pred HHHHHHHHHCCCeEEEechHH------HHhhhCCHH----HHHHHHHHHHHHHHHHh--CCceEEEEeecCCchhHHHHH
Confidence 446899999999999999651 1211 1111 12678888888887764 467999999999998888887
Q ss_pred hcCCC----eeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCC-CcEEEEecCCCCCCChHHHHH
Q 008274 452 ARFPD----VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTAR 526 (571)
Q Consensus 452 ~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~ 526 (571)
.+-|. +++.+++.+|-.... |..... .+++...... ...+...+.++. .|+++|+|++|.-....
T Consensus 87 nrLp~~~r~~v~~v~Ll~p~~~~d-Feihv~-~wlg~~~~~~----~~~~~pei~~l~~~~v~CiyG~~E~d~~cp---- 156 (192)
T PF06057_consen 87 NRLPAALRARVAQVVLLSPSTTAD-FEIHVS-GWLGMGGDDA----AYPVIPEIAKLPPAPVQCIYGEDEDDSLCP---- 156 (192)
T ss_pred hhCCHHHHhheeEEEEeccCCcce-EEEEhh-hhcCCCCCcc----cCCchHHHHhCCCCeEEEEEcCCCCCCcCc----
Confidence 77664 566777776643221 111111 1223222211 124455677777 49999999987643221
Q ss_pred HHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 527 LINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 527 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.+. ...++.+..|| ||.| ..+-..+.+.|++-+++
T Consensus 157 ---~l~--~~~~~~i~lpG-gHHf--d~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 157 ---SLR--QPGVEVIALPG-GHHF--DGDYDALAKRILDALKA 191 (192)
T ss_pred ---ccc--CCCcEEEEcCC-CcCC--CCCHHHHHHHHHHHHhc
Confidence 122 35788889999 5655 34556667777776653
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1e-05 Score=76.60 Aligned_cols=157 Identities=12% Similarity=0.127 Sum_probs=87.5
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG 186 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g 186 (571)
....+.-+.||||.++++.+.... .+.+-|++||+.+.+.... .+.... .+ .|-||++-|+.-..
T Consensus 268 h~~~V~yi~wSPDdryLlaCg~~e----~~~lwDv~tgd~~~~y~~~-~~~S~~-----sc----~W~pDg~~~V~Gs~- 332 (519)
T KOG0293|consen 268 HSQPVSYIMWSPDDRYLLACGFDE----VLSLWDVDTGDLRHLYPSG-LGFSVS-----SC----AWCPDGFRFVTGSP- 332 (519)
T ss_pred ccCceEEEEECCCCCeEEecCchH----heeeccCCcchhhhhcccC-cCCCcc-----ee----EEccCCceeEecCC-
Confidence 445677789999999888775544 2888899999998876643 111111 11 45666644432111
Q ss_pred ccEEEEEeCCCceeeceee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEE
Q 008274 187 FRHLYLHDINGTCLGPITE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVA 265 (571)
Q Consensus 187 ~~~l~~~~~~~~~~~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~ 265 (571)
-++++..+++|.....--. ..--+.+. ..++||++++....... -.+|.... . .....++......+.
T Consensus 333 dr~i~~wdlDgn~~~~W~gvr~~~v~dl-ait~Dgk~vl~v~~d~~---i~l~~~e~----~---~dr~lise~~~its~ 401 (519)
T KOG0293|consen 333 DRTIIMWDLDGNILGNWEGVRDPKVHDL-AITYDGKYVLLVTVDKK---IRLYNREA----R---VDRGLISEEQPITSF 401 (519)
T ss_pred CCcEEEecCCcchhhcccccccceeEEE-EEcCCCcEEEEEecccc---eeeechhh----h---hhhccccccCceeEE
Confidence 2678889888753110000 00123444 37899999998874332 23332221 0 011134444456666
Q ss_pred EECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 266 VLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 266 ~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
+.|.||+++..... +.++.+.++.
T Consensus 402 ~iS~d~k~~LvnL~----~qei~LWDl~ 425 (519)
T KOG0293|consen 402 SISKDGKLALVNLQ----DQEIHLWDLE 425 (519)
T ss_pred EEcCCCcEEEEEcc----cCeeEEeecc
Confidence 77777776654432 2355555554
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.7e-07 Score=67.69 Aligned_cols=58 Identities=29% Similarity=0.473 Sum_probs=48.3
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 329 GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
|.+|....|.|+. ++..+|+++||..... ..|..+++.|+++||.|+++|+||+|.|.
T Consensus 1 G~~L~~~~w~p~~-----~~k~~v~i~HG~~eh~-------~ry~~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPEN-----PPKAVVVIVHGFGEHS-------GRYAHLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CcEEEEEEecCCC-----CCCEEEEEeCCcHHHH-------HHHHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence 5678899999976 2568999999965443 35777899999999999999999999886
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.50 E-value=0.00016 Score=70.44 Aligned_cols=208 Identities=13% Similarity=0.105 Sum_probs=113.0
Q ss_pred EEEEEECCCCceE-EEeccCCCC-CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE---------EE
Q 008274 81 RLGVVSAAGGPVS-WMDLQCGGT-DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK---------VI 149 (571)
Q Consensus 81 ~l~~~dl~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~---------~l 149 (571)
.|-++|+++.+.. .+.+. +. +. ....+-..+..|||||.+++.. .. ....+-++|+++++.. .+
T Consensus 78 ~V~v~D~~t~~~~~~i~~p--~~p~~-~~~~~~~~~~ls~dgk~l~V~n-~~-p~~~V~VvD~~~~kvv~ei~vp~~~~v 152 (352)
T TIGR02658 78 YVEVIDPQTHLPIADIELP--EGPRF-LVGTYPWMTSLTPDNKTLLFYQ-FS-PSPAVGVVDLEGKAFVRMMDVPDCYHI 152 (352)
T ss_pred EEEEEECccCcEEeEEccC--CCchh-hccCccceEEECCCCCEEEEec-CC-CCCEEEEEECCCCcEEEEEeCCCCcEE
Confidence 5788999997764 34332 11 10 0122344678999999666543 22 1224777777776532 22
Q ss_pred EEee---------cCCeee------------ccCCcccC----CCCC--ccCCCeEEEEEecCCccEEEEEeCCCceeec
Q 008274 150 LVEE---------LDSWVN------------LHDCFTPL----DKGV--TKYSGGFIWASEKTGFRHLYLHDINGTCLGP 202 (571)
Q Consensus 150 ~~~~---------~~~w~~------------~~~~~~~~----~~~~--~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~ 202 (571)
.... +..+.. ..+.|... ...+ ...+++.+|.|.. ..|+.+|+.+.+...
T Consensus 153 y~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e---G~V~~id~~~~~~~~ 229 (352)
T TIGR02658 153 FPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT---GKIFQIDLSSGDAKF 229 (352)
T ss_pred EEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC---CeEEEEecCCCccee
Confidence 2111 011111 00111110 0111 1112347777655 578888865543222
Q ss_pred ------eeec----CeEEE--EEEEEeecCcEEEEEEcCCC-----CceeEEEEEEeCCCCCCCCCCCeEecCCCceEEE
Q 008274 203 ------ITEG----DWMVE--QIVGVNEASGQVYFTGTLDG-----PLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVA 265 (571)
Q Consensus 203 ------lT~~----~~~~~--~~~~~s~dg~~l~~~~~~~~-----~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~ 265 (571)
++.+ .|.-. .+..+++||+++|+.+.... ....+++.+++. .+. ...++.-+......
T Consensus 230 ~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~-t~k----vi~~i~vG~~~~~i 304 (352)
T TIGR02658 230 LPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAK-TGK----RLRKIELGHEIDSI 304 (352)
T ss_pred cceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECC-CCe----EEEEEeCCCceeeE
Confidence 2221 12111 23568999999999764211 113689999983 221 44555555667778
Q ss_pred EECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 266 VLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 266 ~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
.+|+||+..+|+.+.. ...+.++|..+++.++.+..
T Consensus 305 avS~Dgkp~lyvtn~~--s~~VsViD~~t~k~i~~i~~ 340 (352)
T TIGR02658 305 NVSQDAKPLLYALSTG--DKTLYIFDAETGKELSSVNQ 340 (352)
T ss_pred EECCCCCeEEEEeCCC--CCcEEEEECcCCeEEeeecc
Confidence 9999999666766543 23699999988887776633
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.6e-06 Score=79.87 Aligned_cols=189 Identities=15% Similarity=0.095 Sum_probs=110.8
Q ss_pred cCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCC
Q 008274 313 RLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR 392 (571)
Q Consensus 313 ~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r 392 (571)
.......+++.++. |+..+.+....-+.. ++.--|+++-|..........+......+.+...+.|..|+.+|||
T Consensus 106 ~~~~~~~kRv~Iq~-D~~~IDt~~I~~~~a----~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYp 180 (365)
T PF05677_consen 106 DDEVSSVKRVPIQY-DGVKIDTMAIHQPEA----KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYP 180 (365)
T ss_pred cccccceeeEEEee-CCEEEEEEEeeCCCC----CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCC
Confidence 33445678888888 888888887653222 3445777777754432210000001123445566799999999999
Q ss_pred CCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCC----CeeEE-EEEcCc
Q 008274 393 GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFP----DVFQC-AVSGAP 466 (571)
Q Consensus 393 G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~----~~~~~-~v~~~~ 466 (571)
|.|.|.+... ..+ .++|..+.++||.++ ..+.+++|++.|||.||.++..++.++. +-++- +|...+
T Consensus 181 GVg~S~G~~s---~~d----Lv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRs 253 (365)
T PF05677_consen 181 GVGSSTGPPS---RKD----LVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRS 253 (365)
T ss_pred ccccCCCCCC---HHH----HHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCC
Confidence 9887643321 122 278889999999875 4568899999999999999988766542 22332 222333
Q ss_pred cCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCC
Q 008274 467 VTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMI 515 (571)
Q Consensus 467 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~ 515 (571)
+.++......+.....+. ...-.=|..+..+.-+++.||-+++|+.+
T Consensus 254 fssl~~vas~~~~~~~~~--l~~l~gWnidS~K~s~~l~cpeIii~~~d 300 (365)
T PF05677_consen 254 FSSLAAVASQFFGPIGKL--LIKLLGWNIDSAKNSEKLQCPEIIIYGVD 300 (365)
T ss_pred cchHHHHHHHHHHHHHHH--HHHHhccCCCchhhhccCCCCeEEEeccc
Confidence 333221111110000000 00000123345566788889999999874
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=8.2e-06 Score=85.63 Aligned_cols=158 Identities=12% Similarity=0.047 Sum_probs=93.6
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+..||||+++||+....... ...+.+||+++.. ++.++++.
T Consensus 352 vsspaiSpdG~~vA~v~~~~~~~----------------------------~d~~s~Lwv~~~g-g~~~~lt~------- 395 (591)
T PRK13616 352 ITSAALSRSGRQVAAVVTLGRGA----------------------------PDPASSLWVGPLG-GVAVQVLE------- 395 (591)
T ss_pred cccceECCCCCEEEEEEeecCCC----------------------------CCcceEEEEEeCC-Ccceeeec-------
Confidence 46788999999999987532111 0123589999974 44466633
Q ss_pred CCCCceeEEEEEccCCeEEEEEEecc--------CccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRS--------QTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG 176 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~--------~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d 176 (571)
.. ....|+|||||+.++++.++. ....+|+.+++++|+.++ . .... . ..+.|++|
T Consensus 396 --g~-~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~-~~g~-------I----ssl~wSpD 458 (591)
T PRK13616 396 --GH-SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--R-VPGP-------I----SELQLSRD 458 (591)
T ss_pred --CC-CCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--c-cCCC-------c----CeEEECCC
Confidence 22 377899999999888876542 123467777777776553 1 0110 0 01135566
Q ss_pred e--EEEEEecCCccEEEE---EeCCCceeece------eecCeE-EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCC
Q 008274 177 G--FIWASEKTGFRHLYL---HDINGTCLGPI------TEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYP 244 (571)
Q Consensus 177 ~--~~~~s~~~g~~~l~~---~~~~~~~~~~l------T~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~ 244 (571)
+ ++|++. | +||+ ...++++ ..| +.+.-. +.+. .|..++. |+..+. . .+..+|++++
T Consensus 459 G~RiA~i~~--g--~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l-~W~~~~~-L~V~~~-~--~~~~v~~v~v-- 526 (591)
T PRK13616 459 GVRAAMIIG--G--KVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVSL-DWRTGDS-LVVGRS-D--PEHPVWYVNL-- 526 (591)
T ss_pred CCEEEEEEC--C--EEEEEEEEeCCCCc-eeecccEEeecccCCccccc-eEecCCE-EEEEec-C--CCCceEEEec--
Confidence 5 777663 3 6777 4545554 333 332222 2444 4887777 554433 2 2477999999
Q ss_pred CCC
Q 008274 245 DWN 247 (571)
Q Consensus 245 ~g~ 247 (571)
+|.
T Consensus 527 DG~ 529 (591)
T PRK13616 527 DGS 529 (591)
T ss_pred CCc
Confidence 775
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.2e-06 Score=82.72 Aligned_cols=71 Identities=20% Similarity=0.134 Sum_probs=57.1
Q ss_pred hhccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcC-CCeeEEEcCCCCCC--CCCCCcHHHHHHHHHHHHHHh
Q 008274 500 HVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAAR-KPYEILIFPDERHM--PRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 500 ~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~--~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.+|+ +|+|.+.|++|.++++.++..+.+.+...+ .+.+..+.+++||. +.....++.++..|.+||.++
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 356788 999999999999999999999988764333 34456677788995 456677888999999999874
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=98.44 E-value=0.00017 Score=70.03 Aligned_cols=181 Identities=11% Similarity=0.058 Sum_probs=93.2
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|++||+.+++.... +. .......+.|+|||+.++.....+ ..|..+|+.+++..........
T Consensus 54 ~v~~~d~~~~~~~~~-~~--------~~~~~~~~~~~~~g~~l~~~~~~~---~~l~~~d~~~~~~~~~~~~~~~----- 116 (300)
T TIGR03866 54 TIQVIDLATGEVIGT-LP--------SGPDPELFALHPNGKILYIANEDD---NLVTVIDIETRKVLAEIPVGVE----- 116 (300)
T ss_pred eEEEEECCCCcEEEe-cc--------CCCCccEEEECCCCCEEEEEcCCC---CeEEEEECCCCeEEeEeeCCCC-----
Confidence 468899988876432 21 112234578999998665543322 2588899988654322111000
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeec-eeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGP-ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~-lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
+ ....+++++ +++.+..++ ..++.++..+++... +..+. .... ..|+++|+.|++.+..++ .++
T Consensus 117 -----~--~~~~~~~dg~~l~~~~~~~-~~~~~~d~~~~~~~~~~~~~~-~~~~-~~~s~dg~~l~~~~~~~~----~v~ 182 (300)
T TIGR03866 117 -----P--EGMAVSPDGKIVVNTSETT-NMAHFIDTKTYEIVDNVLVDQ-RPRF-AEFTADGKELWVSSEIGG----TVS 182 (300)
T ss_pred -----c--ceEEECCCCCEEEEEecCC-CeEEEEeCCCCeEEEEEEcCC-CccE-EEECCCCCEEEEEcCCCC----EEE
Confidence 0 001234554 444443322 234556766554322 21121 2223 358999999888765443 355
Q ss_pred EEEeCCCCCCCCCCCeEecCC-Cc-------eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 239 CAKLYPDWNHTLEAPVKLTNG-KG-------KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~~-~g-------~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
.+++. .+. ....++.. .+ .....+++++++++...... ..+.++++.+++..+.
T Consensus 183 i~d~~-~~~----~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~---~~i~v~d~~~~~~~~~ 244 (300)
T TIGR03866 183 VIDVA-TRK----VIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPA---NRVAVVDAKTYEVLDY 244 (300)
T ss_pred EEEcC-cce----eeeeeeecccccccccCCccceEECCCCCEEEEEcCCC---CeEEEEECCCCcEEEE
Confidence 55652 121 12222211 01 12357899998765443322 3688888866665433
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=98.44 E-value=9.1e-07 Score=94.06 Aligned_cols=99 Identities=19% Similarity=0.116 Sum_probs=65.8
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH----------Hhcc---------
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS----------IKHN--------- 408 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~----------~~~~--------- 408 (571)
..|+||++||..+... .|..+++.|+++||.|+++|+||+|.+....... .+-+
T Consensus 448 g~P~VVllHG~~g~~~-------~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRD 520 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE-------NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARD 520 (792)
T ss_pred CCcEEEEeCCCCCCHH-------HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceecccccccccc
Confidence 4589999999666532 3455688899999999999999998773320000 0000
Q ss_pred CCCCCchhHHHHHHHHH------Hc----CCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 409 CGRIDAEDQLTGAEWLI------KQ----GLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 409 ~~~~~~~D~~~~~~~l~------~~----~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
.-...+.|+......+. .+ ...+..++.++||||||.+++.++..
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 00112456665555554 11 12457799999999999999999875
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.43 E-value=5.4e-06 Score=72.78 Aligned_cols=185 Identities=17% Similarity=0.134 Sum_probs=108.9
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC------CCChh--hhHHH----------HhccC
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT------ARRGL--KFEAS----------IKHNC 409 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~------~~~~~--~~~~~----------~~~~~ 409 (571)
+.+-|+++||--.+. ..|......+...|.+. +..+.+|-+-. ..... .+..+ -..+-
T Consensus 4 ~k~rvLcLHGfrQsg---~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~ 79 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSG---KVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNE 79 (230)
T ss_pred CCceEEEecchhhcc---HHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccc
Confidence 457899999954432 24444444455666666 77787776621 00000 00000 00010
Q ss_pred -CCCCchh----HHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC--C------CeeEEEEEcCccCCcccccch
Q 008274 410 -GRIDAED----QLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF--P------DVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 410 -~~~~~~D----~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--~------~~~~~~v~~~~~~~~~~~~~~ 476 (571)
....+.- +....+|+.+++--| +|+|.|.|+.++..++... . .-|+-+|.++|+..+. ..
T Consensus 80 ~~~~~~~~~eesl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~---~~ 152 (230)
T KOG2551|consen 80 ASFTEYFGFEESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS---KK 152 (230)
T ss_pred cccccccChHHHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc---ch
Confidence 1111222 333444555554345 5999999999999888721 1 1256777777664321 00
Q ss_pred hhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcH
Q 008274 477 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR 556 (571)
Q Consensus 477 ~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 556 (571)
..-..+...+++|.|-+.|+.|.+++.+.+..|++.+... .++.-|+ ||.+- +.
T Consensus 153 ------------------~~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a----~vl~Hpg-gH~VP---~~ 206 (230)
T KOG2551|consen 153 ------------------LDESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA----TVLEHPG-GHIVP---NK 206 (230)
T ss_pred ------------------hhhhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC----eEEecCC-CccCC---Cc
Confidence 0011234568899999999999999999999999987433 5555555 99872 33
Q ss_pred HHHHHHHHHHHHH
Q 008274 557 IYMEERIWEFIER 569 (571)
Q Consensus 557 ~~~~~~i~~fl~~ 569 (571)
....+.+.+||+.
T Consensus 207 ~~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 207 AKYKEKIADFIQS 219 (230)
T ss_pred hHHHHHHHHHHHH
Confidence 3666778888865
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.2e-05 Score=79.56 Aligned_cols=50 Identities=12% Similarity=0.210 Sum_probs=42.3
Q ss_pred hhccCCCcEEEEecCCCCCCChHHHHHHH-------HHHHHcCCCeeEEEcCCCCCC
Q 008274 500 HVHKMKGKLLLVHGMIDENVHFRHTARLI-------NALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 500 ~~~~~~~p~lli~G~~D~~v~~~~~~~~~-------~~l~~~~~~~~~~~~~~~~H~ 549 (571)
.+++|++|+.++.+..|.+.|++|+..+. +.++.+|...-+.+.+..||.
T Consensus 292 DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHL 348 (581)
T PF11339_consen 292 DLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHL 348 (581)
T ss_pred ehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCce
Confidence 47889999999999999999999995443 456777778888899999995
|
Their function is unknown. |
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.8e-06 Score=80.17 Aligned_cols=205 Identities=17% Similarity=0.111 Sum_probs=112.8
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHH-hCCc----EEEEECCCCCCCChhhhH----HHHh----ccCCC---
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGI----LVWKLDNRGTARRGLKFE----ASIK----HNCGR--- 411 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~----~v~~~d~rG~~~~~~~~~----~~~~----~~~~~--- 411 (571)
..|+ ||+||..++.. .+..+++.+. +.|. .++.++.-|.-...+.+. .++. .+...
T Consensus 11 ~tPT-ifihG~~gt~~-------s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~ 82 (255)
T PF06028_consen 11 TTPT-IFIHGYGGTAN-------SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANY 82 (255)
T ss_dssp -EEE-EEE--TTGGCC-------CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHH
T ss_pred CCcE-EEECCCCCChh-------HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCH
Confidence 4466 56899777643 3455677776 5553 355555544321111111 0100 01000
Q ss_pred -CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-----eeEEEEEcCccCCccc-ccchhhh---hh
Q 008274 412 -IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-----VFQCAVSGAPVTSWDG-YDTFYTE---KY 481 (571)
Q Consensus 412 -~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-----~~~~~v~~~~~~~~~~-~~~~~~~---~~ 481 (571)
....-+..++.+|.++..+ +++-++||||||..++.++..+.. .+...|++++..+-.. ....... .-
T Consensus 83 ~~qa~wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~ 160 (255)
T PF06028_consen 83 KKQAKWLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNK 160 (255)
T ss_dssp HHHHHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CST
T ss_pred HHHHHHHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcc
Confidence 0134567788888887644 689999999999999999877422 4566666665544221 1100000 00
Q ss_pred cCCCCCChhhhccCCcchh-hccCC--CcEEEEecC------CCCCCChHHHHHHHHHHHHcCCCeeEEEcCC--CCCCC
Q 008274 482 MGLPSEDPVGYEYSSVMHH-VHKMK--GKLLLVHGM------IDENVHFRHTARLINALVAARKPYEILIFPD--ERHMP 550 (571)
Q Consensus 482 ~g~~~~~~~~~~~~s~~~~-~~~~~--~p~lli~G~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~~ 550 (571)
-| |......|...- .. -.++. ..+|-|.|. .|..||...+..+...++......+-.++.| +.|+-
T Consensus 161 ~g-p~~~~~~y~~l~--~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~ 237 (255)
T PF06028_consen 161 NG-PKSMTPMYQDLL--KNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQ 237 (255)
T ss_dssp T--BSS--HHHHHHH--HTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCG
T ss_pred cC-CcccCHHHHHHH--HHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCcccc
Confidence 12 322223332211 11 12332 479999998 8999999999988887777667777778876 58975
Q ss_pred CCCCcHHHHHHHHHHHH
Q 008274 551 RRHRDRIYMEERIWEFI 567 (571)
Q Consensus 551 ~~~~~~~~~~~~i~~fl 567 (571)
.. +...+.+.|.+||
T Consensus 238 Lh--eN~~V~~~I~~FL 252 (255)
T PF06028_consen 238 LH--ENPQVDKLIIQFL 252 (255)
T ss_dssp GG--CCHHHHHHHHHHH
T ss_pred CC--CCHHHHHHHHHHh
Confidence 33 3446678888887
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=98.34 E-value=0.00022 Score=69.33 Aligned_cols=182 Identities=9% Similarity=0.030 Sum_probs=98.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|.+||+.+++.... +. .......+.|+|||+.++...... ..++.+|.++++..........
T Consensus 96 ~l~~~d~~~~~~~~~-~~--------~~~~~~~~~~~~dg~~l~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~----- 158 (300)
T TIGR03866 96 LVTVIDIETRKVLAE-IP--------VGVEPEGMAVSPDGKIVVNTSETT---NMAHFIDTKTYEIVDNVLVDQR----- 158 (300)
T ss_pred eEEEEECCCCeEEeE-ee--------CCCCcceEEECCCCCEEEEEecCC---CeEEEEeCCCCeEEEEEEcCCC-----
Confidence 578889987654321 11 112234589999999877665432 2366678888765332111100
Q ss_pred cCCcccCCCCCccCCCe-EEEEE-ecCCccEEEEEeCCCcee-eceeec-------CeEEEEEEEEeecCcEEEEEEcCC
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWAS-EKTGFRHLYLHDINGTCL-GPITEG-------DWMVEQIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s-~~~g~~~l~~~~~~~~~~-~~lT~~-------~~~~~~~~~~s~dg~~l~~~~~~~ 230 (571)
+ ....+++++ .++.+ ..+| .|+++++.+++. +.++.. ......+ .++++|+.+|+.....
T Consensus 159 -----~--~~~~~s~dg~~l~~~~~~~~--~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~s~dg~~~~~~~~~~ 228 (300)
T TIGR03866 159 -----P--RFAEFTADGKELWVSSEIGG--TVSVIDVATRKVIKKITFEIPGVHPEAVQPVGI-KLTKDGKTAFVALGPA 228 (300)
T ss_pred -----c--cEEEECCCCCEEEEEcCCCC--EEEEEEcCcceeeeeeeecccccccccCCccce-EECCCCCEEEEEcCCC
Confidence 0 001234444 44433 3344 577788776643 334321 1111223 4899999887765433
Q ss_pred CCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 231 GPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 231 ~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
+ .+..+++. .+. ....+..+.......++|+|++++.... .-..+.++++.+++.++.+
T Consensus 229 ~----~i~v~d~~-~~~----~~~~~~~~~~~~~~~~~~~g~~l~~~~~---~~~~i~v~d~~~~~~~~~~ 287 (300)
T TIGR03866 229 N----RVAVVDAK-TYE----VLDYLLVGQRVWQLAFTPDEKYLLTTNG---VSNDVSVIDVAALKVIKSI 287 (300)
T ss_pred C----eEEEEECC-CCc----EEEEEEeCCCcceEEECCCCCEEEEEcC---CCCeEEEEECCCCcEEEEE
Confidence 2 35566762 221 2223333334456689999998754322 1237999998877765555
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.32 E-value=7.9e-05 Score=76.34 Aligned_cols=209 Identities=16% Similarity=0.175 Sum_probs=121.6
Q ss_pred CCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc-Cc------cEE
Q 008274 63 EAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS-QT------KLK 135 (571)
Q Consensus 63 ~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~-~~------~~~ 135 (571)
++...+.|...-..+....|+++|+++|+...-.+. .. ....+.|++||+.+++..... +. ..+
T Consensus 133 pdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~--------~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 133 PDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIE--------NP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp TTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEE--------EE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred CCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccc--------cc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 444555555544455668899999999976543321 11 122389999999776665333 34 678
Q ss_pred EEEEECCCCce--EEEEEeecCC--eeeccCCcccCCCCCccCCCe-EEEEE-ecCCc-cEEEEEeCCCc-----eeece
Q 008274 136 VLKFDIKTGQR--KVILVEELDS--WVNLHDCFTPLDKGVTKYSGG-FIWAS-EKTGF-RHLYLHDINGT-----CLGPI 203 (571)
Q Consensus 136 i~~~d~~~g~~--~~l~~~~~~~--w~~~~~~~~~~~~~~~~~~d~-~~~~s-~~~g~-~~l~~~~~~~~-----~~~~l 203 (571)
||+..+.++.. +.|.++.... +... ..+.|+ ++++. ..... ..+|++++..+ +.+.|
T Consensus 204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~-----------~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l 272 (414)
T PF02897_consen 204 VYRHKLGTPQSEDELVFEEPDEPFWFVSV-----------SRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLL 272 (414)
T ss_dssp EEEEETTS-GGG-EEEEC-TTCTTSEEEE-----------EE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEE
T ss_pred EEEEECCCChHhCeeEEeecCCCcEEEEE-----------EecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEE
Confidence 99999998864 4666654432 2221 223443 65554 33334 89999998774 56777
Q ss_pred eecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCC-eEecCCCceEEEEECCCCCEEEEEeeCCC
Q 008274 204 TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAP-VKLTNGKGKHVAVLDHNMRNFVDFHDSLD 282 (571)
Q Consensus 204 T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~-~~lt~~~g~~~~~~s~~g~~~v~~~s~~~ 282 (571)
....-..... +...|+.+|+.++.+.+ ...|+++++. ........ ..+...++.....++..++++++.....
T Consensus 273 ~~~~~~~~~~--v~~~~~~~yi~Tn~~a~-~~~l~~~~l~--~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~- 346 (414)
T PF02897_consen 273 SPREDGVEYY--VDHHGDRLYILTNDDAP-NGRLVAVDLA--DPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYREN- 346 (414)
T ss_dssp EESSSS-EEE--EEEETTEEEEEE-TT-T-T-EEEEEETT--STSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEET-
T ss_pred eCCCCceEEE--EEccCCEEEEeeCCCCC-CcEEEEeccc--ccccccceeEEcCCCCceeEEEEEEECCEEEEEEEEC-
Confidence 6543222222 33348889999997665 6899999983 32110012 3344444444446666677888777654
Q ss_pred CCCEEEEEEcCCCce
Q 008274 283 SPPRILLCSLQDGSL 297 (571)
Q Consensus 283 ~p~~l~~~~~~~~~~ 297 (571)
.-+.|.++++..+..
T Consensus 347 ~~~~l~v~~~~~~~~ 361 (414)
T PF02897_consen 347 GSSRLRVYDLDDGKE 361 (414)
T ss_dssp TEEEEEEEETT-TEE
T ss_pred CccEEEEEECCCCcE
Confidence 455999999852443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=6e-05 Score=63.86 Aligned_cols=117 Identities=15% Similarity=0.046 Sum_probs=77.2
Q ss_pred CCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEE
Q 008274 432 VGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLV 511 (571)
Q Consensus 432 ~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli 511 (571)
.+.+.|++||.|...++.++.+....++++++++|..-- .+.........+++.. ...+.-|.+++
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~-------------~~~~~~~~~~tf~~~p-~~~lpfps~vv 123 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVS-------------RPEIRPKHLMTFDPIP-REPLPFPSVVV 123 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcc-------------ccccchhhccccCCCc-cccCCCceeEE
Confidence 345999999999999999998776688999999886321 1111111112222222 23344589999
Q ss_pred ecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC--CCCCcHHHHHHHHHHHH
Q 008274 512 HGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP--RRHRDRIYMEERIWEFI 567 (571)
Q Consensus 512 ~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~--~~~~~~~~~~~~i~~fl 567 (571)
+..+|..++++.++.+++++- ..++....+||.- +......+.+..+.+|+
T Consensus 124 aSrnDp~~~~~~a~~~a~~wg-----s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~ 176 (181)
T COG3545 124 ASRNDPYVSYEHAEDLANAWG-----SALVDVGEGGHINAESGFGPWPEGYALLAQLL 176 (181)
T ss_pred EecCCCCCCHHHHHHHHHhcc-----HhheecccccccchhhcCCCcHHHHHHHHHHh
Confidence 999999999999999999873 3566778888853 12223334444444444
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=98.28 E-value=0.00021 Score=64.37 Aligned_cols=146 Identities=9% Similarity=0.038 Sum_probs=83.3
Q ss_pred EEEEEccCCeEEEEEEecc--C------ccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEE
Q 008274 112 ARVNWMHGNILTAQVLNRS--Q------TKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWA 181 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~--~------~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~ 181 (571)
..+.|+|+|+.|++...+. . ....||.++..+.....+.-...+.-.+. +|+|++ |+++
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~-----------~WsP~g~~favi 77 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDV-----------AWSPNGNEFAVI 77 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEE-----------EECcCCCEEEEE
Confidence 4578999999666554421 1 25689999998877666543222111110 344544 6555
Q ss_pred EecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc
Q 008274 182 SEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG 261 (571)
Q Consensus 182 s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g 261 (571)
... ....+-+++..+.....+.... ...+ .|||+|++|++.+-.+-.+...+ .+. ... +.........
T Consensus 78 ~g~-~~~~v~lyd~~~~~i~~~~~~~--~n~i-~wsP~G~~l~~~g~~n~~G~l~~--wd~--~~~----~~i~~~~~~~ 145 (194)
T PF08662_consen 78 YGS-MPAKVTLYDVKGKKIFSFGTQP--RNTI-SWSPDGRFLVLAGFGNLNGDLEF--WDV--RKK----KKISTFEHSD 145 (194)
T ss_pred Ecc-CCcccEEEcCcccEeEeecCCC--ceEE-EECCCCCEEEEEEccCCCcEEEE--EEC--CCC----EEeeccccCc
Confidence 422 1236667777655555444332 2333 59999999999876543333444 454 111 1111112234
Q ss_pred eEEEEECCCCCEEEEEeeC
Q 008274 262 KHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 262 ~~~~~~s~~g~~~v~~~s~ 280 (571)
...+.|||||++++...+.
T Consensus 146 ~t~~~WsPdGr~~~ta~t~ 164 (194)
T PF08662_consen 146 ATDVEWSPDGRYLATATTS 164 (194)
T ss_pred EEEEEEcCCCCEEEEEEec
Confidence 5566999999999987665
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.2e-05 Score=78.42 Aligned_cols=167 Identities=17% Similarity=0.124 Sum_probs=102.1
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCC--cEEEEECCCC-CCCChhhhHHHHhccCCCCCchhHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG--ILVWKLDNRG-TARRGLKFEASIKHNCGRIDAEDQLTGAEWL 424 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G--~~v~~~d~rG-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l 424 (571)
-.|++++.||.+.. .-..+|...| .+.|.-.| ..|..+|++- .|+.+- ... .+-++.+.++.
T Consensus 175 ~spl~i~aps~p~a-p~tSd~~~~w---qs~lsl~gevvev~tfdl~n~igG~nI--~h~---------ae~~vSf~r~k 239 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLA-PKTSDRMWSW---QSRLSLKGEVVEVPTFDLNNPIGGANI--KHA---------AEYSVSFDRYK 239 (784)
T ss_pred CCceEEeccCCCCC-CccchHHHhH---HHHHhhhceeeeeccccccCCCCCcch--HHH---------HHHHHHHhhhh
Confidence 35899999998822 1122332222 23333333 4566778773 222110 000 23344555543
Q ss_pred HHc--CCCcCCcEEEEeechHHHHHHHHHhcCCCe-eEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhh
Q 008274 425 IKQ--GLAKVGHIGLYGWSYGGYLSAITLARFPDV-FQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHV 501 (571)
Q Consensus 425 ~~~--~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~ 501 (571)
+.+ .......|.|+|+|||+.++++......+. +.|+|++.=..+ ..- | + + ...-..+
T Consensus 240 vlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~-----~vd-----g-p----r----girDE~L 300 (784)
T KOG3253|consen 240 VLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLD-----TVD-----G-P----R----GIRDEAL 300 (784)
T ss_pred hhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEeccccc-----CCC-----c-c----c----CCcchhh
Confidence 332 344667899999999988888777665544 455555421110 000 0 0 0 1111346
Q ss_pred ccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC
Q 008274 502 HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR 551 (571)
Q Consensus 502 ~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 551 (571)
..++.|+|++.|.+|..++++..+.+.++++ ..++++++.+++|.+.
T Consensus 301 ldmk~PVLFV~Gsnd~mcspn~ME~vreKMq---A~~elhVI~~adhsma 347 (784)
T KOG3253|consen 301 LDMKQPVLFVIGSNDHMCSPNSMEEVREKMQ---AEVELHVIGGADHSMA 347 (784)
T ss_pred HhcCCceEEEecCCcccCCHHHHHHHHHHhh---ccceEEEecCCCcccc
Confidence 6788999999999999999999999999885 4578999999999983
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00024 Score=69.44 Aligned_cols=134 Identities=13% Similarity=0.042 Sum_probs=95.0
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE-cCccCCcccccchhhhhhcCCCC---------------CCh--
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS-GAPVTSWDGYDTFYTEKYMGLPS---------------EDP-- 489 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~g~~~---------------~~~-- 489 (571)
..++.++.+|.|.|==|..+..+++ ...|++|++- +.++.++.......-+.|.|... ..+
T Consensus 167 ~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f 245 (367)
T PF10142_consen 167 FGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEF 245 (367)
T ss_pred cCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHH
Confidence 4567889999999999999988888 5567777665 33444432111111111110111 011
Q ss_pred -hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 490 -VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 490 -~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
......+|+.+.++++.|-|++.|..|+...+..+.-++..|. .+..++.+|+++|+... ..+.+.+..|+.
T Consensus 246 ~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~---G~K~lr~vPN~~H~~~~----~~~~~~l~~f~~ 318 (367)
T PF10142_consen 246 DKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLP---GEKYLRYVPNAGHSLIG----SDVVQSLRAFYN 318 (367)
T ss_pred HHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCC---CCeeEEeCCCCCcccch----HHHHHHHHHHHH
Confidence 2335568999999999999999999999999999999999883 46788999999999844 566777888876
Q ss_pred H
Q 008274 569 R 569 (571)
Q Consensus 569 ~ 569 (571)
.
T Consensus 319 ~ 319 (367)
T PF10142_consen 319 R 319 (367)
T ss_pred H
Confidence 5
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=98.15 E-value=4.7e-05 Score=70.79 Aligned_cols=228 Identities=9% Similarity=0.082 Sum_probs=117.8
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
.++++-| .+++.++.... +++|++|-.|.-+.... ..|..-+...........|.++-+|.||+......+.
T Consensus 3 ~v~t~~G-~v~V~v~G~~~-----~~kp~ilT~HDvGlNh~--scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p 74 (283)
T PF03096_consen 3 DVETPYG-SVHVTVQGDPK-----GNKPAILTYHDVGLNHK--SCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLP 74 (283)
T ss_dssp EEEETTE-EEEEEEESS-------TTS-EEEEE--TT--HH--HHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----
T ss_pred eeccCce-EEEEEEEecCC-----CCCceEEEeccccccch--HHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccccc
Confidence 3455445 57777775433 36799999998433221 1132222222223335689999999999865433222
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchh-----
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY----- 477 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----- 477 (571)
.. +.-..++++.+.+..+.+.. .-+.+.-+|--+||++-+.+|..+|+++-++|++.+...-.++..+.
T Consensus 75 ~~----y~yPsmd~LAe~l~~Vl~~f--~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~ 148 (283)
T PF03096_consen 75 EG----YQYPSMDQLAEMLPEVLDHF--GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLS 148 (283)
T ss_dssp TT---------HHHHHCTHHHHHHHH--T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH
T ss_pred cc----ccccCHHHHHHHHHHHHHhC--CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHh
Confidence 11 11112344444444444432 33568999999999999999999999999999988865421111110
Q ss_pred -----------------hhhhcCCCC--CCh---hhhc-----cCC----------------cchhhccCCCcEEEEecC
Q 008274 478 -----------------TEKYMGLPS--EDP---VGYE-----YSS----------------VMHHVHKMKGKLLLVHGM 514 (571)
Q Consensus 478 -----------------~~~~~g~~~--~~~---~~~~-----~~s----------------~~~~~~~~~~p~lli~G~ 514 (571)
..+++|... .+. +.|. ..+ .........+|+|++.|+
T Consensus 149 ~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~ 228 (283)
T PF03096_consen 149 SWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGD 228 (283)
T ss_dssp -------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEET
T ss_pred cccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEec
Confidence 001111000 010 0110 011 111233446899999998
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 515 IDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 515 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.-+. ...+..+..+|. ..+.+++..+++|=.. ..+.+..+.+.+.=|++.
T Consensus 229 ~Sp~--~~~vv~~ns~Ld--p~~ttllkv~dcGglV-~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 229 NSPH--VDDVVEMNSKLD--PTKTTLLKVADCGGLV-LEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp TSTT--HHHHHHHHHHS---CCCEEEEEETT-TT-H-HHH-HHHHHHHHHHHHHH
T ss_pred CCcc--hhhHHHHHhhcC--cccceEEEecccCCcc-cccCcHHHHHHHHHHHcc
Confidence 7664 457788888874 3688999999997765 345667777777777764
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.15 E-value=4.2e-05 Score=73.92 Aligned_cols=165 Identities=15% Similarity=0.145 Sum_probs=100.8
Q ss_pred hhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 373 DMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 373 ~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+....+|.++|..|..++.++-...-. ..++.+...+++.++++.+.+.. -.++|-++|+|.||.++..+++
T Consensus 129 ~s~V~~l~~~g~~vfvIsw~nPd~~~~------~~~~edYi~e~l~~aid~v~~it--g~~~InliGyCvGGtl~~~ala 200 (445)
T COG3243 129 KSLVRWLLEQGLDVFVISWRNPDASLA------AKNLEDYILEGLSEAIDTVKDIT--GQKDINLIGYCVGGTLLAAALA 200 (445)
T ss_pred ccHHHHHHHcCCceEEEeccCchHhhh------hccHHHHHHHHHHHHHHHHHHHh--CccccceeeEecchHHHHHHHH
Confidence 345889999999999999885432211 11211112355667777776653 2367999999999999999988
Q ss_pred cCCCe-eEEEEEcCccCCcccc----------------------------------------c---chhhhhhc-CC-CC
Q 008274 453 RFPDV-FQCAVSGAPVTSWDGY----------------------------------------D---TFYTEKYM-GL-PS 486 (571)
Q Consensus 453 ~~~~~-~~~~v~~~~~~~~~~~----------------------------------------~---~~~~~~~~-g~-~~ 486 (571)
.++.+ ++.+.......|+... + ..|.+.|+ |. |-
T Consensus 201 ~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl 280 (445)
T COG3243 201 LMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPL 280 (445)
T ss_pred hhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCC
Confidence 87776 7766655443332100 0 00111111 10 00
Q ss_pred -CCh--------------------hhhccC----------CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC
Q 008274 487 -EDP--------------------VGYEYS----------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR 535 (571)
Q Consensus 487 -~~~--------------------~~~~~~----------s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~ 535 (571)
.+. ..|.++ .-.-.+.+|+||++.+.|++|.++|........+.+ +
T Consensus 281 ~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~---~ 357 (445)
T COG3243 281 PFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLL---G 357 (445)
T ss_pred chhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhc---C
Confidence 000 011111 111236678999999999999999998888777766 5
Q ss_pred CCeeEEEcCCCCCC
Q 008274 536 KPYEILIFPDERHM 549 (571)
Q Consensus 536 ~~~~~~~~~~~~H~ 549 (571)
.++++++. ++||-
T Consensus 358 g~~~f~l~-~sGHI 370 (445)
T COG3243 358 GEVTFVLS-RSGHI 370 (445)
T ss_pred CceEEEEe-cCceE
Confidence 57888776 45895
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.08 E-value=9.2e-06 Score=67.63 Aligned_cols=118 Identities=19% Similarity=0.247 Sum_probs=80.6
Q ss_pred HHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcc
Q 008274 419 TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVM 498 (571)
Q Consensus 419 ~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~ 498 (571)
+.-+|++++.. +.+..+-|.||||+.++.+..++|++|..+|+.+++.+.+.+ +|...++...| ++|.
T Consensus 89 AyerYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardf--------fg~yyddDv~y--nsP~ 156 (227)
T COG4947 89 AYERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDF--------FGGYYDDDVYY--NSPS 156 (227)
T ss_pred HHHHHHHHhhc--CCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHh--------ccccccCceee--cChh
Confidence 34556666532 345778999999999999999999999999999999876422 22222222222 4444
Q ss_pred hhh---------ccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 499 HHV---------HKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 499 ~~~---------~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
..+ ++++ ..+.+..|..|+..+ +...+.+.|..+.++..+.+..+..|..
T Consensus 157 dylpg~~dp~~l~rlr~~~~vfc~G~e~~~L~--~~~~L~~~l~dKqipaw~~~WggvaHdw 216 (227)
T COG4947 157 DYLPGLADPFRLERLRRIDMVFCIGDEDPFLD--NNQHLSRLLSDKQIPAWMHVWGGVAHDW 216 (227)
T ss_pred hhccCCcChHHHHHHhhccEEEEecCcccccc--chHHHHHHhccccccHHHHHhccccccc
Confidence 443 3333 367778888887765 5667777787777888777776666654
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.0022 Score=61.04 Aligned_cols=203 Identities=15% Similarity=0.085 Sum_probs=110.1
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|||||+.|+....+ ..+.+|++.+++.....
T Consensus 10 ~~i~~~~~~~~~~~l~~~~~~------------------------------------g~i~i~~~~~~~~~~~~------ 47 (289)
T cd00200 10 GGVTCVAFSPDGKLLATGSGD------------------------------------GTIKVWDLETGELLRTL------ 47 (289)
T ss_pred CCEEEEEEcCCCCEEEEeecC------------------------------------cEEEEEEeeCCCcEEEE------
Confidence 345678999999999875432 14677888876533221
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC-eEEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG-GFIWA 181 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d-~~~~~ 181 (571)
......+..+.|+|+++.++...... .|++.|..+++........... + ..+ .+.++ .+++.
T Consensus 48 --~~~~~~i~~~~~~~~~~~l~~~~~~~----~i~i~~~~~~~~~~~~~~~~~~-i------~~~----~~~~~~~~~~~ 110 (289)
T cd00200 48 --KGHTGPVRDVAASADGTYLASGSSDK----TIRLWDLETGECVRTLTGHTSY-V------SSV----AFSPDGRILSS 110 (289)
T ss_pred --ecCCcceeEEEECCCCCEEEEEcCCC----eEEEEEcCcccceEEEeccCCc-E------EEE----EEcCCCCEEEE
Confidence 11234456789999998777765433 4888888876433222211110 0 000 12333 35555
Q ss_pred EecCCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC
Q 008274 182 SEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK 260 (571)
Q Consensus 182 s~~~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~ 260 (571)
+..+| .|+++++..++ ...+......+..+ .|+++++.++... .++ .++.+++. .+. ....+....
T Consensus 111 ~~~~~--~i~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~~-~~~----~i~i~d~~-~~~----~~~~~~~~~ 177 (289)
T cd00200 111 SSRDK--TIKVWDVETGKCLTTLRGHTDWVNSV-AFSPDGTFVASSS-QDG----TIKLWDLR-TGK----CVATLTGHT 177 (289)
T ss_pred ecCCC--eEEEEECCCcEEEEEeccCCCcEEEE-EEcCcCCEEEEEc-CCC----cEEEEEcc-ccc----cceeEecCc
Confidence 54344 56677766443 33333223234444 4888876555443 232 34444552 121 222333222
Q ss_pred -ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 261 -GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 261 -g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
......++++++.+++... -..+.++++..++....+
T Consensus 178 ~~i~~~~~~~~~~~l~~~~~----~~~i~i~d~~~~~~~~~~ 215 (289)
T cd00200 178 GEVNSVAFSPDGEKLLSSSS----DGTIKLWDLSTGKCLGTL 215 (289)
T ss_pred cccceEEECCCcCEEEEecC----CCcEEEEECCCCceecch
Confidence 3345689999987766543 246888887665544433
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.0021 Score=66.04 Aligned_cols=217 Identities=9% Similarity=0.063 Sum_probs=114.8
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEEeecCCeeec
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSWVNL 160 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~~~~~~w~~~ 160 (571)
+-+||..+|-= .+++ ++....+..+.|+.+|+.++-.+-.+. +-..|+..+.. |..+..+...+.-
T Consensus 374 VKvWn~~SgfC-~vTF-------teHts~Vt~v~f~~~g~~llssSLDGt----VRAwDlkRYrNfRTft~P~p~Qfsc- 440 (893)
T KOG0291|consen 374 VKVWNTQSGFC-FVTF-------TEHTSGVTAVQFTARGNVLLSSSLDGT----VRAWDLKRYRNFRTFTSPEPIQFSC- 440 (893)
T ss_pred EEEEeccCceE-EEEe-------ccCCCceEEEEEEecCCEEEEeecCCe----EEeeeecccceeeeecCCCceeeeE-
Confidence 45666665532 2333 234556788899999986665543331 44455555443 2222211111111
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeec-CeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEG-DWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
+ +-++.+ +++....+ ..+|++++..+|+...+-+| +..+... +++|+|+.|+-.+.+.- ..+|
T Consensus 441 ------v----avD~sGelV~AG~~d-~F~IfvWS~qTGqllDiLsGHEgPVs~l-~f~~~~~~LaS~SWDkT---VRiW 505 (893)
T KOG0291|consen 441 ------V----AVDPSGELVCAGAQD-SFEIFVWSVQTGQLLDILSGHEGPVSGL-SFSPDGSLLASGSWDKT---VRIW 505 (893)
T ss_pred ------E----EEcCCCCEEEeeccc-eEEEEEEEeecCeeeehhcCCCCcceee-EEccccCeEEeccccce---EEEE
Confidence 1 113334 55443333 46799999888886655444 5455555 49999996666555443 4444
Q ss_pred EEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCC
Q 008274 239 CAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEP 318 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 318 (571)
.+=- ... ..+.|......-.++|+|||+.++...... +|-.++...+.+.-.+... ..+...+. .
T Consensus 506 ~if~--s~~----~vEtl~i~sdvl~vsfrPdG~elaVaTldg----qItf~d~~~~~q~~~Idgr----kD~~~gR~-~ 570 (893)
T KOG0291|consen 506 DIFS--SSG----TVETLEIRSDVLAVSFRPDGKELAVATLDG----QITFFDIKEAVQVGSIDGR----KDLSGGRK-E 570 (893)
T ss_pred Eeec--cCc----eeeeEeeccceeEEEEcCCCCeEEEEEecc----eEEEEEhhhceeeccccch----hhcccccc-c
Confidence 4322 211 334444333456679999999998876553 6777776555543333221 12222222 2
Q ss_pred CeEEEEEc-CCCcEEEEEEEcCCC
Q 008274 319 PDIVQIQA-NDGTVLYGALYKPDE 341 (571)
Q Consensus 319 ~~~~~~~~-~dg~~l~~~~~~P~~ 341 (571)
.+.++-+. ..+.......|.+++
T Consensus 571 ~D~~ta~~sa~~K~Ftti~ySaDG 594 (893)
T KOG0291|consen 571 TDRITAENSAKGKTFTTICYSADG 594 (893)
T ss_pred cceeehhhcccCCceEEEEEcCCC
Confidence 23333332 245666666776654
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.0025 Score=65.90 Aligned_cols=183 Identities=11% Similarity=0.082 Sum_probs=98.2
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|.+||+........++ .+...++....|+|+|+.++..+... .|.+.|+.+|++....+.....-..
T Consensus 226 tiriwd~~~~~~~~~~l-------~gH~~~v~~~~f~p~g~~i~Sgs~D~----tvriWd~~~~~~~~~l~~hs~~is~- 293 (456)
T KOG0266|consen 226 TLRIWDLKDDGRNLKTL-------KGHSTYVTSVAFSPDGNLLVSGSDDG----TVRIWDVRTGECVRKLKGHSDGISG- 293 (456)
T ss_pred eEEEeeccCCCeEEEEe-------cCCCCceEEEEecCCCCEEEEecCCC----cEEEEeccCCeEEEeeeccCCceEE-
Confidence 57889994332222233 24567889999999996666554433 3888899998877655543321111
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee---eceeecCeE-EEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL---GPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~---~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
+ ..++++ ++..+..+| .|.++|+.++.. +.+...... ......++|++++|+..+.... .
T Consensus 294 ------~----~f~~d~~~l~s~s~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~---~ 358 (456)
T KOG0266|consen 294 ------L----AFSPDGNLLVSASYDG--TIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRT---L 358 (456)
T ss_pred ------E----EECCCCCEEEEcCCCc--cEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCe---E
Confidence 1 123444 555554444 466777777763 344443322 2233459999988777654332 4
Q ss_pred EEEEEEeCCCCCCCCCCCeEecCC-C---ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTNG-K---GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~~-~---g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.+|.+.- +. -+...+.- . ....+..++++++++-.... ..++..+..++..+..+
T Consensus 359 ~~w~l~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d----~~v~~~~~~s~~~~~~l 417 (456)
T KOG0266|consen 359 KLWDLRS---GK----SVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSED----GSVYVWDSSSGGILQRL 417 (456)
T ss_pred EEEEccC---Cc----ceeeecccCCcceeEecccccCCCCeEEEEeCC----ceEEEEeCCccchhhhh
Confidence 4444331 11 11122211 1 12233446677665443322 36777777665544333
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.03 E-value=8.4e-05 Score=62.05 Aligned_cols=134 Identities=16% Similarity=0.193 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCC--hhhhc
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSED--PVGYE 493 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~ 493 (571)
...+.++.++.+.. | ..++|+|.|.|||.+.+++.++. +++++....+...+.+ ..++|.+... -+.|.
T Consensus 44 ~a~~ele~~i~~~~-~-~~p~ivGssLGGY~At~l~~~~G--irav~~NPav~P~e~l-----~gylg~~en~ytg~~y~ 114 (191)
T COG3150 44 QALKELEKAVQELG-D-ESPLIVGSSLGGYYATWLGFLCG--IRAVVFNPAVRPYELL-----TGYLGRPENPYTGQEYV 114 (191)
T ss_pred HHHHHHHHHHHHcC-C-CCceEEeecchHHHHHHHHHHhC--ChhhhcCCCcCchhhh-----hhhcCCCCCCCCcceEE
Confidence 34444555554421 2 34999999999999999998763 3444433222222111 2233332210 01221
Q ss_pred cCC----c--chhhccCCC-cE-EEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHH
Q 008274 494 YSS----V--MHHVHKMKG-KL-LLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWE 565 (571)
Q Consensus 494 ~~s----~--~~~~~~~~~-p~-lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 565 (571)
-.+ - ...+..++. .. .++.-+.|++....++.+.+... ..++..+++|.|. ......++|..
T Consensus 115 le~~hI~~l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~~-------~~~V~dgg~H~F~---~f~~~l~~i~a 184 (191)
T COG3150 115 LESRHIATLCVLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHPC-------YEIVWDGGDHKFK---GFSRHLQRIKA 184 (191)
T ss_pred eehhhHHHHHHhhccccCCCcEEEeecccccHHHHHHHHHHHhhhh-------hheeecCCCcccc---chHHhHHHHHH
Confidence 000 0 011223332 34 44455559998888777766654 4457888999984 35666788888
Q ss_pred HHH
Q 008274 566 FIE 568 (571)
Q Consensus 566 fl~ 568 (571)
|..
T Consensus 185 F~g 187 (191)
T COG3150 185 FKG 187 (191)
T ss_pred Hhc
Confidence 864
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.0055 Score=58.28 Aligned_cols=180 Identities=16% Similarity=0.195 Sum_probs=93.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.+||+.+++.... + ......+..+.|+|+++.++..... ..|..+|+.+++.......... .+.
T Consensus 74 ~i~i~~~~~~~~~~~-~-------~~~~~~i~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~-~i~- 139 (289)
T cd00200 74 TIRLWDLETGECVRT-L-------TGHTSYVSSVAFSPDGRILSSSSRD----KTIKVWDVETGKCLTTLRGHTD-WVN- 139 (289)
T ss_pred eEEEEEcCcccceEE-E-------eccCCcEEEEEEcCCCCEEEEecCC----CeEEEEECCCcEEEEEeccCCC-cEE-
Confidence 478888887543222 1 1234467789999998766555422 2488888887665433321111 010
Q ss_pred cCCcccCCCCCccCCC-eEEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSG-GFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d-~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.+ .++++ .+++....+| .|++++...++. ..+......+..+ .|+++++.+++.+. ++ .+.
T Consensus 140 -----~~----~~~~~~~~l~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~~~-~~----~i~ 202 (289)
T cd00200 140 -----SV----AFSPDGTFVASSSQDG--TIKLWDLRTGKCVATLTGHTGEVNSV-AFSPDGEKLLSSSS-DG----TIK 202 (289)
T ss_pred -----EE----EEcCcCCEEEEEcCCC--cEEEEEccccccceeEecCccccceE-EECCCcCEEEEecC-CC----cEE
Confidence 00 12333 3555554344 466677654433 3333333234444 48999988888776 32 344
Q ss_pred EEEeCCCCCCCCCCCeEe-cCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 239 CAKLYPDWNHTLEAPVKL-TNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~l-t~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
.+++. .+. ....+ ..........+++++..++ ..+ .-..++++++.+++....
T Consensus 203 i~d~~-~~~----~~~~~~~~~~~i~~~~~~~~~~~~~-~~~---~~~~i~i~~~~~~~~~~~ 256 (289)
T cd00200 203 LWDLS-TGK----CLGTLRGHENGVNSVAFSPDGYLLA-SGS---EDGTIRVWDLRTGECVQT 256 (289)
T ss_pred EEECC-CCc----eecchhhcCCceEEEEEcCCCcEEE-EEc---CCCcEEEEEcCCceeEEE
Confidence 44541 121 22223 1222344568888865444 333 223678888755554333
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.013 Score=55.09 Aligned_cols=208 Identities=18% Similarity=0.209 Sum_probs=114.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEc-cCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM-HGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws-pDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|+.++.++++...+... . ....... +||++++. .... +.++|.++|+.+.+........
T Consensus 23 ~i~~~~~~~~~~~~~~~~--------~---~~G~~~~~~~g~l~v~-~~~~-----~~~~d~~~g~~~~~~~~~~~~~-- 83 (246)
T PF08450_consen 23 RIYRVDPDTGEVEVIDLP--------G---PNGMAFDRPDGRLYVA-DSGG-----IAVVDPDTGKVTVLADLPDGGV-- 83 (246)
T ss_dssp EEEEEETTTTEEEEEESS--------S---EEEEEEECTTSEEEEE-ETTC-----EEEEETTTTEEEEEEEEETTCS--
T ss_pred EEEEEECCCCeEEEEecC--------C---CceEEEEccCCEEEEE-EcCc-----eEEEecCCCcEEEEeeccCCCc--
Confidence 578899999887766552 1 3334555 78764433 2222 5666999999888877532100
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCC----c--cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTG----F--RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g----~--~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
+...+... ..++++ +++...... . ..||+++.+ ++.+.+..+-.....+ .|++|++.||++-+..+
T Consensus 84 --~~~~~ND~--~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi-~~s~dg~~lyv~ds~~~- 156 (246)
T PF08450_consen 84 --PFNRPNDV--AVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGI-AFSPDGKTLYVADSFNG- 156 (246)
T ss_dssp --CTEEEEEE--EE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEE-EEETTSSEEEEEETTTT-
T ss_pred --ccCCCceE--EEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccce-EECCcchheeecccccc-
Confidence 01111111 124555 555433321 2 579999988 5555554332122344 49999999999876554
Q ss_pred ceeEEEEEEeCCCCCCCCCCCeEe---cCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCCh
Q 008274 233 LESHLYCAKLYPDWNHTLEAPVKL---TNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTV 308 (571)
Q Consensus 233 ~~~~l~~~~l~~~g~~~~~~~~~l---t~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~ 308 (571)
.|++++++.++. .....+.+ ....+ -....+..+|+..+..+ ....+++++. +|+.+..+.-.
T Consensus 157 ---~i~~~~~~~~~~-~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~----~~~~I~~~~p-~G~~~~~i~~p---- 223 (246)
T PF08450_consen 157 ---RIWRFDLDADGG-ELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADW----GGGRIVVFDP-DGKLLREIELP---- 223 (246)
T ss_dssp ---EEEEEEEETTTC-CEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEE----TTTEEEEEET-TSCEEEEEE-S----
T ss_pred ---eeEEEecccccc-ceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEc----CCCEEEEECC-CccEEEEEcCC----
Confidence 488888732232 01112222 22222 34568888997655544 2348999887 47655444221
Q ss_pred hhhccCCCCCCeEEEEEcCCCcEEEE
Q 008274 309 PRIKRLQLEPPDIVQIQANDGTVLYG 334 (571)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~dg~~l~~ 334 (571)
...+..+.|-.++...|..
T Consensus 224 -------~~~~t~~~fgg~~~~~L~v 242 (246)
T PF08450_consen 224 -------VPRPTNCAFGGPDGKTLYV 242 (246)
T ss_dssp -------SSSEEEEEEESTTSSEEEE
T ss_pred -------CCCEEEEEEECCCCCEEEE
Confidence 1245666666556555544
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0022 Score=58.16 Aligned_cols=247 Identities=14% Similarity=0.106 Sum_probs=126.7
Q ss_pred eeecccceeeeecc-CCCceEEECC--CCCeEEEEEE-eCC--CCCeEEEeecCCCCCCCCCcccccCCCCCC----CCc
Q 008274 9 QTHGLAEYIAQEEM-DRKTGYWWSL--DSKFIAFTQV-DSS--EIPRFRIMHQGKSSVGSEAQEDHAYPFAGA----SNV 78 (571)
Q Consensus 9 ~~~g~~~~~~~~~~-~~~~~~~wSP--Dg~~iay~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~----~~~ 78 (571)
..+|-+|||.++-+ .....+-.|. |-+-|.+-.. ++. +++...+ .+- +.......-.++|. ..-
T Consensus 10 tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~---~GH---sH~v~dv~~s~dg~~alS~sw 83 (315)
T KOG0279|consen 10 TLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRL---TGH---SHFVSDVVLSSDGNFALSASW 83 (315)
T ss_pred eecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeee---ecc---ceEecceEEccCCceEEeccc
Confidence 56899999999887 3455555544 4333433222 211 1111111 010 01222222222222 111
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
.-.|.+||+++|+.++.-. +...-+..+++|||++.|+.-+ |+. -|-+.|+.++....+.++.+..|+
T Consensus 84 D~~lrlWDl~~g~~t~~f~--------GH~~dVlsva~s~dn~qivSGS-rDk---Tiklwnt~g~ck~t~~~~~~~~WV 151 (315)
T KOG0279|consen 84 DGTLRLWDLATGESTRRFV--------GHTKDVLSVAFSTDNRQIVSGS-RDK---TIKLWNTLGVCKYTIHEDSHREWV 151 (315)
T ss_pred cceEEEEEecCCcEEEEEE--------ecCCceEEEEecCCCceeecCC-Ccc---eeeeeeecccEEEEEecCCCcCcE
Confidence 1358899999998766533 3455677899999999877643 332 388889998776666665546787
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeece-eecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPI-TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~l-T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
.. .+|.|.. .+-++.....++. +-+.|+.+-+.+.- ....-.+.-. .+||||..... +..+ -.+
T Consensus 152 sc-vrfsP~~------~~p~Ivs~s~Dkt--vKvWnl~~~~l~~~~~gh~~~v~t~-~vSpDGslcas-Ggkd----g~~ 216 (315)
T KOG0279|consen 152 SC-VRFSPNE------SNPIIVSASWDKT--VKVWNLRNCQLRTTFIGHSGYVNTV-TVSPDGSLCAS-GGKD----GEA 216 (315)
T ss_pred EE-EEEcCCC------CCcEEEEccCCce--EEEEccCCcchhhccccccccEEEE-EECCCCCEEec-CCCC----ceE
Confidence 64 2344421 1224433333333 33445555432211 1122233333 59999975433 3333 456
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCcee
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLV 298 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~ 298 (571)
+.++++ .+. ...-+....-.++..|||+.-++..... +.|-+.++.+++.+
T Consensus 217 ~LwdL~-~~k----~lysl~a~~~v~sl~fspnrywL~~at~-----~sIkIwdl~~~~~v 267 (315)
T KOG0279|consen 217 MLWDLN-EGK----NLYSLEAFDIVNSLCFSPNRYWLCAATA-----TSIKIWDLESKAVV 267 (315)
T ss_pred EEEEcc-CCc----eeEeccCCCeEeeEEecCCceeEeeccC-----CceEEEeccchhhh
Confidence 666773 222 2222322333456689998644433221 23666777555543
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.8e-05 Score=84.18 Aligned_cols=130 Identities=18% Similarity=0.178 Sum_probs=84.7
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC-CCChhhhHHHHhccCC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-ARRGLKFEASIKHNCG 410 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~~~~~~~~~~~~~~~ 410 (571)
|..-+|.|...... + +||+|++|||.........+ ........+..+..+|++++||-. -|......... .|
T Consensus 97 LylNV~tp~~~~~~-~-~pV~V~iHGG~~~~gs~~~~--~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~---~g 169 (545)
T KOG1516|consen 97 LYLNVYTPQGCSES-K-LPVMVYIHGGGFQFGSASSF--EIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAA---PG 169 (545)
T ss_pred ceEEEeccCCCccC-C-CCEEEEEeCCceeeccccch--hhcCchhccccCCEEEEEecccceeceeeecCCCCC---CC
Confidence 77788888764211 2 89999999986543311111 111224455677899999999932 11100000111 24
Q ss_pred CCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccC
Q 008274 411 RIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVT 468 (571)
Q Consensus 411 ~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~ 468 (571)
...+.|+..|++|+.+. ..-|+++|.|+|||+||..+..+.... ..+|+.+|..++..
T Consensus 170 N~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 170 NLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 44578999999999886 335999999999999999998776531 25788877776643
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.0078 Score=59.86 Aligned_cols=171 Identities=11% Similarity=0.065 Sum_probs=81.2
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCeeeccCCcccCCCCCccCCCe-EEEEE-ecC
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVNLHDCFTPLDKGVTKYSGG-FIWAS-EKT 185 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s-~~~ 185 (571)
...-.+.++|||++++.. +...+...+|.+|..+++......-. ..+--+.+- .+++|+ ++|+. +..
T Consensus 144 ~h~H~v~~~pdg~~v~v~-dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~---------~f~pdg~~~Yv~~e~s 213 (345)
T PF10282_consen 144 PHPHQVVFSPDGRFVYVP-DLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHL---------AFSPDGKYAYVVNELS 213 (345)
T ss_dssp TCEEEEEE-TTSSEEEEE-ETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEE---------EE-TTSSEEEEEETTT
T ss_pred ccceeEEECCCCCEEEEE-ecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEE---------EEcCCcCEEEEecCCC
Confidence 344568999999976544 55556656666666666544322111 111001001 223443 44443 334
Q ss_pred CccEEEEEeCCCceeeceee-----cCe----EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe
Q 008274 186 GFRHLYLHDINGTCLGPITE-----GDW----MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL 256 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~-----~~~----~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l 256 (571)
+.-.+|.++..++..+.+.. ..+ ....+ .++|||++||.+....+ ...+|.++. .+|. +.....+
T Consensus 214 ~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i-~ispdg~~lyvsnr~~~--sI~vf~~d~-~~g~--l~~~~~~ 287 (345)
T PF10282_consen 214 NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEI-AISPDGRFLYVSNRGSN--SISVFDLDP-ATGT--LTLVQTV 287 (345)
T ss_dssp TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEE-EE-TTSSEEEEEECTTT--EEEEEEECT-TTTT--EEEEEEE
T ss_pred CcEEEEeecccCCceeEEEEeeeccccccccCCceeE-EEecCCCEEEEEeccCC--EEEEEEEec-CCCc--eEEEEEE
Confidence 44444555533544333211 111 23344 48999999988765544 355565543 1232 1122233
Q ss_pred cC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 257 TN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 257 t~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
.. +..-..+.++|+|++++......+. -.++.++..+|.
T Consensus 288 ~~~G~~Pr~~~~s~~g~~l~Va~~~s~~-v~vf~~d~~tG~ 327 (345)
T PF10282_consen 288 PTGGKFPRHFAFSPDGRYLYVANQDSNT-VSVFDIDPDTGK 327 (345)
T ss_dssp EESSSSEEEEEE-TTSSEEEEEETTTTE-EEEEEEETTTTE
T ss_pred eCCCCCccEEEEeCCCCEEEEEecCCCe-EEEEEEeCCCCc
Confidence 32 2223556899999988776544432 244445554554
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00096 Score=64.63 Aligned_cols=219 Identities=15% Similarity=0.127 Sum_probs=128.0
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
++.-+.+.+.. ++.+.-+ +|+|... .++..+||++||...+. .|......+.+.|.+.|++++++-.+.--
T Consensus 59 lp~~e~~~L~~-~~~~fla-L~~~~~~---~~~~G~vIilp~~g~~~----d~p~~i~~LR~~L~~~GW~Tlsit~P~~~ 129 (310)
T PF12048_consen 59 LPADEVQWLQA-GEERFLA-LWRPANS---AKPQGAVIILPDWGEHP----DWPGLIAPLRRELPDHGWATLSITLPDPA 129 (310)
T ss_pred CCHhhcEEeec-CCEEEEE-EEecccC---CCCceEEEEecCCCCCC----CcHhHHHHHHHHhhhcCceEEEecCCCcc
Confidence 44455566665 4444544 5667543 25678999999965443 45555667788899999999998877511
Q ss_pred CC-hhhh-------HH---------------------HHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHH
Q 008274 396 RR-GLKF-------EA---------------------SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYL 446 (571)
Q Consensus 396 ~~-~~~~-------~~---------------------~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~ 446 (571)
.. ...+ .. ............-+.+++.++.+++ ..+|+|+||+.|+++
T Consensus 130 ~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~---~~~ivlIg~G~gA~~ 206 (310)
T PF12048_consen 130 PPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG---GKNIVLIGHGTGAGW 206 (310)
T ss_pred cccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHH
Confidence 00 0000 00 0000000001223445555555553 345999999999999
Q ss_pred HHHHHhcCCC-eeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHH
Q 008274 447 SAITLARFPD-VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTA 525 (571)
Q Consensus 447 a~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~ 525 (571)
++.++...+. .+.+.|.+++-..-.. . .......+.+++.|+|=|++.. .... ....
T Consensus 207 ~~~~la~~~~~~~daLV~I~a~~p~~~--------------~------n~~l~~~la~l~iPvLDi~~~~-~~~~-~~~a 264 (310)
T PF12048_consen 207 AARYLAEKPPPMPDALVLINAYWPQPD--------------R------NPALAEQLAQLKIPVLDIYSAD-NPAS-QQTA 264 (310)
T ss_pred HHHHHhcCCCcccCeEEEEeCCCCcch--------------h------hhhHHHHhhccCCCEEEEecCC-ChHH-HHHH
Confidence 9999998754 4678888776432100 0 1122345677889999999876 3222 2222
Q ss_pred HHHHHHHHcC--CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 526 RLINALVAAR--KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 526 ~~~~~l~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
...+.+.++. ...+-+.+++..|.... ....+.++|..||+++
T Consensus 265 ~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~--~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 265 KQRKQAAKRNKKPDYRQIQLPGLPDNPSG--WQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHHhccCCCceeEecCCCCCChhh--HHHHHHHHHHHHHHhh
Confidence 3323332222 45666677777776532 2333889999999875
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0012 Score=60.85 Aligned_cols=230 Identities=12% Similarity=0.063 Sum_probs=133.4
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccc-hhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTV-DMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~-~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
.++..+.+.-|. +++.++.-.. .+.|++|-.|+-+.... ..|..-+ .+.++.+.++ |.++-+|.+|+-.-
T Consensus 22 ~~e~~V~T~~G~-v~V~V~Gd~~-----~~kpaiiTyhDlglN~~--scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~g 92 (326)
T KOG2931|consen 22 CQEHDVETAHGV-VHVTVYGDPK-----GNKPAIITYHDLGLNHK--SCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDG 92 (326)
T ss_pred ceeeeecccccc-EEEEEecCCC-----CCCceEEEecccccchH--hHhHHhhcCHhHHHHHhh-eEEEecCCCccccC
Confidence 466777776654 7777775332 25688999998443322 1122111 2335667777 99999999997433
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC------cc
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS------WD 471 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~------~~ 471 (571)
...+ ...+.-..++++.+.|-.+++.. .-+.|.-+|--+|+++-.++|..||+++-+.|++.+... |.
T Consensus 93 Ap~~----p~~y~yPsmd~LAd~l~~VL~~f--~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~ 166 (326)
T KOG2931|consen 93 APSF----PEGYPYPSMDDLADMLPEVLDHF--GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWA 166 (326)
T ss_pred CccC----CCCCCCCCHHHHHHHHHHHHHhc--CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHH
Confidence 2222 12212223556666665555543 345788899999999999999999999999999876543 21
Q ss_pred cc--c--------------chhhhhhcCCCC---------------------CChhhh----ccCCcch-----hhccCC
Q 008274 472 GY--D--------------TFYTEKYMGLPS---------------------EDPVGY----EYSSVMH-----HVHKMK 505 (571)
Q Consensus 472 ~~--~--------------~~~~~~~~g~~~---------------------~~~~~~----~~~s~~~-----~~~~~~ 505 (571)
.. . .....+++|.-. .+...| .....+. ....++
T Consensus 167 ~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlk 246 (326)
T KOG2931|consen 167 YNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLK 246 (326)
T ss_pred HHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCcccc
Confidence 00 0 000111111110 111111 1111111 011456
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+|+|++.|++-+-+ +....+..+|. .....+....++|-.. ..+..-.+.+.+.=|++
T Consensus 247 c~vllvvGd~Sp~~--~~vv~~n~~Ld--p~~ttllk~~d~g~l~-~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 247 CPVLLVVGDNSPHV--SAVVECNSKLD--PTYTTLLKMADCGGLV-QEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred ccEEEEecCCCchh--hhhhhhhcccC--cccceEEEEcccCCcc-cccCchHHHHHHHHHHc
Confidence 99999999877654 45566666663 2577888888988765 33345555566655554
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=97.91 E-value=6.6e-05 Score=70.00 Aligned_cols=97 Identities=18% Similarity=0.103 Sum_probs=60.1
Q ss_pred EEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHH-HHHHHHHHcCC
Q 008274 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQL-TGAEWLIKQGL 429 (571)
Q Consensus 351 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~l~~~~~ 429 (571)
.|+++|++.++.. .|..+++.+...++.|+.++++|.+...... ..++++. ..++.+....
T Consensus 2 ~lf~~p~~gG~~~-------~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~----------~si~~la~~y~~~I~~~~- 63 (229)
T PF00975_consen 2 PLFCFPPAGGSAS-------SYRPLARALPDDVIGVYGIEYPGRGDDEPPP----------DSIEELASRYAEAIRARQ- 63 (229)
T ss_dssp EEEEESSTTCSGG-------GGHHHHHHHTTTEEEEEEECSTTSCTTSHEE----------SSHHHHHHHHHHHHHHHT-
T ss_pred eEEEEcCCccCHH-------HHHHHHHhCCCCeEEEEEEecCCCCCCCCCC----------CCHHHHHHHHHHHhhhhC-
Confidence 5788999877643 4566677777657999999999875222110 0122222 2233333322
Q ss_pred CcCCcEEEEeechHHHHHHHHHhc---CCCeeEEEEEcCc
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLAR---FPDVFQCAVSGAP 466 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~---~~~~~~~~v~~~~ 466 (571)
...++.|+|||+||.+|..+|.+ ....+..+++.++
T Consensus 64 -~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~ 102 (229)
T PF00975_consen 64 -PEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDS 102 (229)
T ss_dssp -SSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESC
T ss_pred -CCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecC
Confidence 23489999999999999988754 3344666666653
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.0041 Score=56.25 Aligned_cols=188 Identities=11% Similarity=0.084 Sum_probs=95.9
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
..+.++|||.|++||-.+++.+- .++.-..++-.-++.
T Consensus 63 sVRsvAwsp~g~~La~aSFD~t~------------------------------------~Iw~k~~~efecv~~------ 100 (312)
T KOG0645|consen 63 SVRSVAWSPHGRYLASASFDATV------------------------------------VIWKKEDGEFECVAT------ 100 (312)
T ss_pred eeeeeeecCCCcEEEEeeccceE------------------------------------EEeecCCCceeEEee------
Confidence 36789999999999998877443 111111222221211
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE---EEeecCCeeeccCCcccCCCCCccCCC-eEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI---LVEELDSWVNLHDCFTPLDKGVTKYSG-GFI 179 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l---~~~~~~~w~~~~~~~~~~~~~~~~~~d-~~~ 179 (571)
|.+.+.-+-.++||++|.+|+.++ |+ ..-+|+.+| +.++-..+ ..++.+ . +...|.|. .++
T Consensus 101 lEGHEnEVK~Vaws~sG~~LATCS-RD-KSVWiWe~d-eddEfec~aVL~~HtqD----V--------K~V~WHPt~dlL 165 (312)
T KOG0645|consen 101 LEGHENEVKCVAWSASGNYLATCS-RD-KSVWIWEID-EDDEFECIAVLQEHTQD----V--------KHVIWHPTEDLL 165 (312)
T ss_pred eeccccceeEEEEcCCCCEEEEee-CC-CeEEEEEec-CCCcEEEEeeecccccc----c--------cEEEEcCCccee
Confidence 123455667799999999999885 44 345788777 45554332 222211 0 00022332 255
Q ss_pred EEEecCCccEEEEEeCCCce---eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE--EEeCCCCCCCCCCCe
Q 008274 180 WASEKTGFRHLYLHDINGTC---LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC--AKLYPDWNHTLEAPV 254 (571)
Q Consensus 180 ~~s~~~g~~~l~~~~~~~~~---~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~--~~l~~~g~~~~~~~~ 254 (571)
|...-+.--.+|+-.. +.. ...|....-.+-.. .|++.|..|.-.+++.. ..||+ .++ .+. .-+
T Consensus 166 ~S~SYDnTIk~~~~~~-dddW~c~~tl~g~~~TVW~~-~F~~~G~rl~s~sdD~t---v~Iw~~~~~~--~~~----~sr 234 (312)
T KOG0645|consen 166 FSCSYDNTIKVYRDED-DDDWECVQTLDGHENTVWSL-AFDNIGSRLVSCSDDGT---VSIWRLYTDL--SGM----HSR 234 (312)
T ss_pred EEeccCCeEEEEeecC-CCCeeEEEEecCccceEEEE-EecCCCceEEEecCCcc---eEeeeeccCc--chh----ccc
Confidence 5443333344454432 221 23343333344444 38888877776655433 66666 444 221 112
Q ss_pred EecCCC--ceEEEEECCCCCEEEEEee
Q 008274 255 KLTNGK--GKHVAVLDHNMRNFVDFHD 279 (571)
Q Consensus 255 ~lt~~~--g~~~~~~s~~g~~~v~~~s 279 (571)
.+..-+ ....++...|++..+|.-+
T Consensus 235 ~~Y~v~W~~~~IaS~ggD~~i~lf~~s 261 (312)
T KOG0645|consen 235 ALYDVPWDNGVIASGGGDDAIRLFKES 261 (312)
T ss_pred ceEeeeecccceEeccCCCEEEEEEec
Confidence 222111 1123455667766666555
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0025 Score=60.33 Aligned_cols=117 Identities=17% Similarity=0.156 Sum_probs=67.5
Q ss_pred eEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCC
Q 008274 27 GYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNY 106 (571)
Q Consensus 27 ~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~ 106 (571)
-+.|||||++||=-+.+ ..|.+||.++|+..--++ ..
T Consensus 162 cvawsPDgk~iASG~~d------------------------------------g~I~lwdpktg~~~g~~l-------~g 198 (480)
T KOG0271|consen 162 CVAWSPDGKKIASGSKD------------------------------------GSIRLWDPKTGQQIGRAL-------RG 198 (480)
T ss_pred EEEECCCcchhhccccC------------------------------------CeEEEecCCCCCcccccc-------cC
Confidence 47799999999864433 136778888876542222 34
Q ss_pred CCceeEEEEEcc-----CCeEEEEEEeccCccEEEEEEECCCCceEEEEE-eecC-CeeeccCCcccCCCCCccCCCeEE
Q 008274 107 DEEYLARVNWMH-----GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELD-SWVNLHDCFTPLDKGVTKYSGGFI 179 (571)
Q Consensus 107 ~~~~~~~~~wsp-----Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~-~~~~-~w~~~~~~~~~~~~~~~~~~d~~~ 179 (571)
....+...+|-| ..++++..+..+ .+.+-|+..|.+..+.. ++.. ..+ .|.+++++
T Consensus 199 H~K~It~Lawep~hl~p~~r~las~skDg----~vrIWd~~~~~~~~~lsgHT~~VTCv-------------rwGG~gli 261 (480)
T KOG0271|consen 199 HKKWITALAWEPLHLVPPCRRLASSSKDG----SVRIWDTKLGTCVRTLSGHTASVTCV-------------RWGGEGLI 261 (480)
T ss_pred cccceeEEeecccccCCCccceecccCCC----CEEEEEccCceEEEEeccCccceEEE-------------EEcCCceE
Confidence 456677788855 455555554433 37777888887654432 2211 111 23456677
Q ss_pred EEEecCCccEEEEEeCCCceeecee
Q 008274 180 WASEKTGFRHLYLHDINGTCLGPIT 204 (571)
Q Consensus 180 ~~s~~~g~~~l~~~~~~~~~~~~lT 204 (571)
+.+..++.-.+|... +|.-.+.|.
T Consensus 262 ySgS~DrtIkvw~a~-dG~~~r~lk 285 (480)
T KOG0271|consen 262 YSGSQDRTIKVWRAL-DGKLCRELK 285 (480)
T ss_pred EecCCCceEEEEEcc-chhHHHhhc
Confidence 776666655555543 233334444
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00032 Score=66.09 Aligned_cols=135 Identities=14% Similarity=0.174 Sum_probs=77.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE--EEEEeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK--VILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~--~l~~~~~~~w~ 158 (571)
.+.+||+.+..+.. +. ....+.+..++|||||+.|+.-+..+ .|...|+++|+.. .|..+. .|+
T Consensus 138 TvR~WD~~TeTp~~-t~-------KgH~~WVlcvawsPDgk~iASG~~dg----~I~lwdpktg~~~g~~l~gH~--K~I 203 (480)
T KOG0271|consen 138 TVRLWDLDTETPLF-TC-------KGHKNWVLCVAWSPDGKKIASGSKDG----SIRLWDPKTGQQIGRALRGHK--KWI 203 (480)
T ss_pred eEEeeccCCCCcce-ee-------cCCccEEEEEEECCCcchhhccccCC----eEEEecCCCCCcccccccCcc--cce
Confidence 45778988754321 11 23456778899999999888765544 3999999998753 232222 343
Q ss_pred eccCCcccCCCCCccCCC-eEEEEEecCCccEEEEEeCCCceeec-eeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 159 NLHDCFTPLDKGVTKYSG-GFIWASEKTGFRHLYLHDINGTCLGP-ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d-~~~~~s~~~g~~~l~~~~~~~~~~~~-lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
.. -.|.|.. ..+. +.+..+.++|--.|| |...++... |+.....+.-+ .| .|..+.|+++.+.. ..
T Consensus 204 t~-Lawep~h----l~p~~r~las~skDg~vrIW--d~~~~~~~~~lsgHT~~VTCv-rw--GG~gliySgS~Drt--Ik 271 (480)
T KOG0271|consen 204 TA-LAWEPLH----LVPPCRRLASSSKDGSVRIW--DTKLGTCVRTLSGHTASVTCV-RW--GGEGLIYSGSQDRT--IK 271 (480)
T ss_pred eE-Eeecccc----cCCCccceecccCCCCEEEE--EccCceEEEEeccCccceEEE-EE--cCCceEEecCCCce--EE
Confidence 21 1233332 1222 355556667754444 444444433 33334444433 47 45558888887763 67
Q ss_pred EEEEE
Q 008274 237 LYCAK 241 (571)
Q Consensus 237 l~~~~ 241 (571)
+|+..
T Consensus 272 vw~a~ 276 (480)
T KOG0271|consen 272 VWRAL 276 (480)
T ss_pred EEEcc
Confidence 77643
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0075 Score=59.60 Aligned_cols=174 Identities=13% Similarity=0.061 Sum_probs=95.5
Q ss_pred eeeeeeecccceeeeecc----CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceE
Q 008274 5 FHVLQTHGLAEYIAQEEM----DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKV 80 (571)
Q Consensus 5 ~~~~~~~g~~~~~~~~~~----~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~ 80 (571)
|.|++|.|-|- =|.-.+ .-...+++||||+++|=+..| -
T Consensus 170 n~v~ffeGPPF-KFk~s~r~HskFV~~VRysPDG~~Fat~gsD------------------------------------g 212 (603)
T KOG0318|consen 170 NTVAFFEGPPF-KFKSSFREHSKFVNCVRYSPDGSRFATAGSD------------------------------------G 212 (603)
T ss_pred CeEEEeeCCCe-eeeecccccccceeeEEECCCCCeEEEecCC------------------------------------c
Confidence 67888888774 232222 224678899999998765443 1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~~w~~ 159 (571)
.+++||=++|+..-. +++. ....+.++.++||||+++++.++.... +-+-|+.+.++.+ +.-... ++
T Consensus 213 ki~iyDGktge~vg~-l~~~----~aHkGsIfalsWsPDs~~~~T~SaDkt----~KIWdVs~~slv~t~~~~~~---v~ 280 (603)
T KOG0318|consen 213 KIYIYDGKTGEKVGE-LEDS----DAHKGSIFALSWSPDSTQFLTVSADKT----IKIWDVSTNSLVSTWPMGST---VE 280 (603)
T ss_pred cEEEEcCCCccEEEE-ecCC----CCccccEEEEEECCCCceEEEecCCce----EEEEEeeccceEEEeecCCc---hh
Confidence 468888887765422 2110 235678899999999998888765442 4444666665322 211111 11
Q ss_pred ccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeec-CeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEG-DWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
+ ..-.+ -|..|.++-+|-. |+ |-.++++.....++-.| ...+... ..++|+++||-.+. ++ +|-
T Consensus 281 d--qqvG~----lWqkd~lItVSl~-G~--in~ln~~d~~~~~~i~GHnK~ITaL-tv~~d~~~i~Sgsy-DG----~I~ 345 (603)
T KOG0318|consen 281 D--QQVGC----LWQKDHLITVSLS-GT--INYLNPSDPSVLKVISGHNKSITAL-TVSPDGKTIYSGSY-DG----HIN 345 (603)
T ss_pred c--eEEEE----EEeCCeEEEEEcC-cE--EEEecccCCChhheecccccceeEE-EEcCCCCEEEeecc-Cc----eEE
Confidence 1 00111 2444555555433 43 33444444443333333 4455555 48999976665443 33 455
Q ss_pred EEEe
Q 008274 239 CAKL 242 (571)
Q Consensus 239 ~~~l 242 (571)
..+.
T Consensus 346 ~W~~ 349 (603)
T KOG0318|consen 346 SWDS 349 (603)
T ss_pred EEec
Confidence 5554
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=97.85 E-value=3e-05 Score=75.51 Aligned_cols=115 Identities=17% Similarity=0.175 Sum_probs=64.0
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhH-HHHh--CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQ-YLRS--KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEW 423 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~-~l~~--~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 423 (571)
...|++|++||...... ...|.. .+.. ++.. .++.|+++|+...... .+..+...- ......+...|..
T Consensus 69 ~~~pt~iiiHGw~~~~~-~~~~~~---~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n~--~~vg~~la~~l~~ 140 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGS-SESWIQ---DMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVANT--RLVGRQLAKFLSF 140 (331)
T ss_dssp TTSEEEEEE--TT-TT--TTTHHH---HHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHHH--HHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCccc-chhHHH---HHHHHHHhhccCCceEEEEcchhhccc--cccchhhhH--HHHHHHHHHHHHH
Confidence 46799999999655531 223322 2233 3444 5899999999642111 111111100 0012345566777
Q ss_pred HHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC--eeEEEEEcCccCC
Q 008274 424 LIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD--VFQCAVSGAPVTS 469 (571)
Q Consensus 424 l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~--~~~~~v~~~~~~~ 469 (571)
|.+...++.++|.|+|||+||++|..+...... ++..+....|...
T Consensus 141 L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 141 LINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 775555789999999999999999988877665 6777888777643
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0013 Score=69.32 Aligned_cols=165 Identities=10% Similarity=0.027 Sum_probs=95.5
Q ss_pred ceeEEEEEccCCeEEEEEEecc----CccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EE---
Q 008274 109 EYLARVNWMHGNILTAQVLNRS----QTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FI--- 179 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~----~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~--- 179 (571)
.....+..||||+.++++..+. .....||+++. +|+.+.++..... ..+ +|++|+ +.
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~~~----t~P---------sWspDG~~lw~v~ 415 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGHSL----TRP---------SWSLDADAVWVVV 415 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCCCC----CCc---------eECCCCCceEEEe
Confidence 4678899999999888886421 23558999997 4555777653211 111 334442 33
Q ss_pred ------EEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCC
Q 008274 180 ------WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAP 253 (571)
Q Consensus 180 ------~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~ 253 (571)
+++.+.+..+||+++.++++.++ .....+.++. ||+||++|+|+.. + ...+..+.-..+|..++..+
T Consensus 416 dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~-wSpDG~RiA~i~~--g--~v~Va~Vvr~~~G~~~l~~~ 488 (591)
T PRK13616 416 DGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPISELQ-LSRDGVRAAMIIG--G--KVYLAVVEQTEDGQYALTNP 488 (591)
T ss_pred cCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcCeEE-ECCCCCEEEEEEC--C--EEEEEEEEeCCCCceeeccc
Confidence 33334455688988888877664 2222356664 9999999999983 2 23333333222332223344
Q ss_pred eEecCCCc--eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCcee
Q 008274 254 VKLTNGKG--KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLV 298 (571)
Q Consensus 254 ~~lt~~~g--~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~ 298 (571)
+.|+..-+ .....|..+++ |+...++... .++.+++ +|...
T Consensus 489 ~~l~~~l~~~~~~l~W~~~~~-L~V~~~~~~~--~v~~v~v-DG~~~ 531 (591)
T PRK13616 489 REVGPGLGDTAVSLDWRTGDS-LVVGRSDPEH--PVWYVNL-DGSNS 531 (591)
T ss_pred EEeecccCCccccceEecCCE-EEEEecCCCC--ceEEEec-CCccc
Confidence 55554322 24457888887 4444444333 3677777 45543
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0011 Score=62.30 Aligned_cols=64 Identities=13% Similarity=0.049 Sum_probs=57.7
Q ss_pred CCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 504 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 504 ~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
..+|-|.+.++.|.+++.+..+++++..++.|.+++...++++.|.-....+.+...+.+.+|+
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 3479999999999999999999999999999999999999999998777788888888888773
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.014 Score=60.53 Aligned_cols=165 Identities=10% Similarity=0.081 Sum_probs=83.2
Q ss_pred CCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEe
Q 008274 106 YDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~ 183 (571)
.....+..+.|+|++. .++... .+. .|.+.|+++++.......... .+. .+ .|++++ +++.+.
T Consensus 123 gH~~~V~~l~f~P~~~~iLaSgs-~Dg---tVrIWDl~tg~~~~~l~~h~~-~V~------sl----a~spdG~lLatgs 187 (493)
T PTZ00421 123 GHTKKVGIVSFHPSAMNVLASAG-ADM---VVNVWDVERGKAVEVIKCHSD-QIT------SL----EWNLDGSLLCTTS 187 (493)
T ss_pred CCCCcEEEEEeCcCCCCEEEEEe-CCC---EEEEEECCCCeEEEEEcCCCC-ceE------EE----EEECCCCEEEEec
Confidence 3455678899999875 555443 332 378889998875433221111 110 11 344555 555555
Q ss_pred cCCccEEEEEeCCCcee-eceeecC-eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec---C
Q 008274 184 KTGFRHLYLHDINGTCL-GPITEGD-WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT---N 258 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~-~~lT~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt---~ 258 (571)
.+| .|.++|+.+++. ..+.... ...... .|.++++.|+..+.... ....+..+++.. .. .+.... .
T Consensus 188 ~Dg--~IrIwD~rsg~~v~tl~~H~~~~~~~~-~w~~~~~~ivt~G~s~s-~Dr~VklWDlr~-~~----~p~~~~~~d~ 258 (493)
T PTZ00421 188 KDK--KLNIIDPRDGTIVSSVEAHASAKSQRC-LWAKRKDLIITLGCSKS-QQRQIMLWDTRK-MA----SPYSTVDLDQ 258 (493)
T ss_pred CCC--EEEEEECCCCcEEEEEecCCCCcceEE-EEcCCCCeEEEEecCCC-CCCeEEEEeCCC-CC----CceeEeccCC
Confidence 555 355667655432 2332221 112223 38888877766553221 124555566621 11 222221 1
Q ss_pred CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 259 GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 259 ~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
..+...+.++++++.++....+. ..|.++++.+++.
T Consensus 259 ~~~~~~~~~d~d~~~L~lggkgD---g~Iriwdl~~~~~ 294 (493)
T PTZ00421 259 SSALFIPFFDEDTNLLYIGSKGE---GNIRCFELMNERL 294 (493)
T ss_pred CCceEEEEEcCCCCEEEEEEeCC---CeEEEEEeeCCce
Confidence 12333457889988655443222 2677777765553
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00014 Score=67.02 Aligned_cols=102 Identities=16% Similarity=0.128 Sum_probs=58.8
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHH--------HhCCcEEEEECCCCCC--CChhhhHHHHhccCCCCCchhHHH
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYL--------RSKGILVWKLDNRGTA--RRGLKFEASIKHNCGRIDAEDQLT 419 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l--------~~~G~~v~~~d~rG~~--~~~~~~~~~~~~~~~~~~~~D~~~ 419 (571)
..|||+||..++.. . ++.++..+ ....+.++++|+.... ..|..... ..+-+.+
T Consensus 5 ~pVlFIhG~~Gs~~---q----~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~---------q~~~~~~ 68 (225)
T PF07819_consen 5 IPVLFIHGNAGSYK---Q----VRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQR---------QAEFLAE 68 (225)
T ss_pred CEEEEECcCCCCHh---H----HHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHH---------HHHHHHH
Confidence 45678999766533 1 11122222 1235889999987532 11211110 0223444
Q ss_pred HHHHHHHcC---CCcCCcEEEEeechHHHHHHHHHhcCC---CeeEEEEEcCcc
Q 008274 420 GAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPV 467 (571)
Q Consensus 420 ~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~~---~~~~~~v~~~~~ 467 (571)
+++.+.+.. ....++|.|+||||||.++-.++...+ +.++.+|..+..
T Consensus 69 ~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 69 AIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred HHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 555554432 346789999999999999988876543 467777776543
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0065 Score=60.10 Aligned_cols=59 Identities=8% Similarity=0.046 Sum_probs=31.2
Q ss_pred EEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEe
Q 008274 215 GVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFH 278 (571)
Q Consensus 215 ~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~ 278 (571)
.++|||+++|.. ++.. ....++.++- ++. .......+..+..-....++|||++++...
T Consensus 234 ~~~pdg~~lyv~-~~~~-~~I~v~~i~~--~~~-~~~~~~~~~~~~~p~~~~~~~dg~~l~va~ 292 (330)
T PRK11028 234 HITPDGRHLYAC-DRTA-SLISVFSVSE--DGS-VLSFEGHQPTETQPRGFNIDHSGKYLIAAG 292 (330)
T ss_pred EECCCCCEEEEe-cCCC-CeEEEEEEeC--CCC-eEEEeEEEeccccCCceEECCCCCEEEEEE
Confidence 488999988886 3332 1355555543 331 000111111122223458999999877654
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0045 Score=55.72 Aligned_cols=52 Identities=10% Similarity=0.056 Sum_probs=35.2
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ 145 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~ 145 (571)
.+.+||+..++...... ..+....++|||||..+++..+.+ .|-.+|+.+-+
T Consensus 88 ~ir~wd~r~~k~~~~i~---------~~~eni~i~wsp~g~~~~~~~kdD----~it~id~r~~~ 139 (313)
T KOG1407|consen 88 TIRIWDIRSGKCTARIE---------TKGENINITWSPDGEYIAVGNKDD----RITFIDARTYK 139 (313)
T ss_pred eEEEEEeccCcEEEEee---------ccCcceEEEEcCCCCEEEEecCcc----cEEEEEecccc
Confidence 46889999887664432 223334579999999888875444 37777877654
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00031 Score=63.04 Aligned_cols=210 Identities=16% Similarity=0.133 Sum_probs=110.5
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCC-----cEEEEECCCCCCCChhhh----HHHHh-------ccCC
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG-----ILVWKLDNRGTARRGLKF----EASIK-------HNCG 410 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G-----~~v~~~d~rG~~~~~~~~----~~~~~-------~~~~ 410 (571)
..+|+| |+||..+... ..+.++..|...+ -.++.+|--|+-...+.. ...+. ++.+
T Consensus 44 ~~iPTI-fIhGsgG~as-------S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~ 115 (288)
T COG4814 44 VAIPTI-FIHGSGGTAS-------SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASG 115 (288)
T ss_pred cccceE-EEecCCCChh-------HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCch
Confidence 367875 5899777654 2233455555444 567777777642211111 00000 1111
Q ss_pred CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-----eeEEEEEcCccCCccc--ccchhhhhhcC
Q 008274 411 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-----VFQCAVSGAPVTSWDG--YDTFYTEKYMG 483 (571)
Q Consensus 411 ~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-----~~~~~v~~~~~~~~~~--~~~~~~~~~~g 483 (571)
.....-+..++.+|.++.. -.++-++||||||.....++..+.+ .+...|+.++..+-.. .+....+-...
T Consensus 116 ~~~s~wlk~~msyL~~~Y~--i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~ 193 (288)
T COG4814 116 LDQSKWLKKAMSYLQKHYN--IPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKD 193 (288)
T ss_pred hhHHHHHHHHHHHHHHhcC--CceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeecc
Confidence 1113456778888888864 4579999999999999988876432 2355555554433100 00000000000
Q ss_pred CCCCChhhhccCCcchhhccC--CCcEEEEecCCC------CCCChHHHHHHHHHHHHcCCCeeEEEcCC--CCCCCCCC
Q 008274 484 LPSEDPVGYEYSSVMHHVHKM--KGKLLLVHGMID------ENVHFRHTARLINALVAARKPYEILIFPD--ERHMPRRH 553 (571)
Q Consensus 484 ~~~~~~~~~~~~s~~~~~~~~--~~p~lli~G~~D------~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~~~~~ 553 (571)
.|......|..+- ......+ ...+|+|.|+-| -.||...+......+...++...--+|++ +.|.-.
T Consensus 194 ~~~~~~t~y~~y~-~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~l-- 270 (288)
T COG4814 194 GPGLIKTPYYDYI-AKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKL-- 270 (288)
T ss_pred CccccCcHHHHHH-HhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhcc--
Confidence 1100000010000 0011222 247999999854 56777888888777766666666556665 568652
Q ss_pred CcHHHHHHHHHHHHHH
Q 008274 554 RDRIYMEERIWEFIER 569 (571)
Q Consensus 554 ~~~~~~~~~i~~fl~~ 569 (571)
++...+.+.+..||-+
T Consensus 271 hen~~v~~yv~~FLw~ 286 (288)
T COG4814 271 HENPTVAKYVKNFLWE 286 (288)
T ss_pred CCChhHHHHHHHHhhc
Confidence 3344566777777743
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0024 Score=57.41 Aligned_cols=182 Identities=15% Similarity=0.141 Sum_probs=98.4
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|..||+++|-.+.+.+ +.+++++....+ ....
T Consensus 21 ~~v~Sv~wn~~g~~lasgs~dkt------------------------------------v~v~n~e~~r~~-~~~~---- 59 (313)
T KOG1407|consen 21 QKVHSVAWNCDGTKLASGSFDKT------------------------------------VSVWNLERDRFR-KELV---- 59 (313)
T ss_pred hcceEEEEcccCceeeecccCCc------------------------------------eEEEEecchhhh-hhhc----
Confidence 45567899999999987665422 244555543211 1110
Q ss_pred CCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEE
Q 008274 103 DQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIW 180 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~ 180 (571)
.......+.+..|.|-.. .++.++... .|.+.|...+++..-++........ .|+|++ .+.
T Consensus 60 -~~gh~~svdql~w~~~~~d~~atas~dk----~ir~wd~r~~k~~~~i~~~~eni~i------------~wsp~g~~~~ 122 (313)
T KOG1407|consen 60 -YRGHTDSVDQLCWDPKHPDLFATASGDK----TIRIWDIRSGKCTARIETKGENINI------------TWSPDGEYIA 122 (313)
T ss_pred -ccCCCcchhhheeCCCCCcceEEecCCc----eEEEEEeccCcEEEEeeccCcceEE------------EEcCCCCEEE
Confidence 022233566788998766 444444333 3888899988876544433222111 244444 444
Q ss_pred EEecCCccEEEEEeCCCceeeceee--cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC
Q 008274 181 ASEKTGFRHLYLHDINGTCLGPITE--GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258 (571)
Q Consensus 181 ~s~~~g~~~l~~~~~~~~~~~~lT~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~ 258 (571)
..+++. .|-.+|...- +.+-. -.+++..+. |+ ..+-++|..+..|- .+|...+- -. .+.-|..
T Consensus 123 ~~~kdD--~it~id~r~~--~~~~~~~~~~e~ne~~-w~-~~nd~Fflt~GlG~--v~ILsyps--Lk-----pv~si~A 187 (313)
T KOG1407|consen 123 VGNKDD--RITFIDARTY--KIVNEEQFKFEVNEIS-WN-NSNDLFFLTNGLGC--VEILSYPS--LK-----PVQSIKA 187 (313)
T ss_pred EecCcc--cEEEEEeccc--ceeehhcccceeeeee-ec-CCCCEEEEecCCce--EEEEeccc--cc-----ccccccc
Confidence 444433 2444443322 22222 244566665 66 44568888887664 67766542 11 1112222
Q ss_pred -CCceEEEEECCCCCEEEEE
Q 008274 259 -GKGKHVAVLDHNMRNFVDF 277 (571)
Q Consensus 259 -~~g~~~~~~s~~g~~~v~~ 277 (571)
..+.....|+|+|++++.-
T Consensus 188 H~snCicI~f~p~GryfA~G 207 (313)
T KOG1407|consen 188 HPSNCICIEFDPDGRYFATG 207 (313)
T ss_pred CCcceEEEEECCCCceEeec
Confidence 2234556899999998764
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00065 Score=59.55 Aligned_cols=90 Identities=22% Similarity=0.194 Sum_probs=66.3
Q ss_pred chhhhHHHHhCCcEEEEECCCCC-CCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHH
Q 008274 372 VDMRAQYLRSKGILVWKLDNRGT-ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAIT 450 (571)
Q Consensus 372 ~~~~~~~l~~~G~~v~~~d~rG~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 450 (571)
..++..+|.+.+|..+.+-.|.+ .|+|. ..+ +.+.+|+..+++++....+ ...|+++|||.|..=.+.+
T Consensus 55 ~~~L~~~lde~~wslVq~q~~Ssy~G~Gt---~sl-----k~D~edl~~l~~Hi~~~~f--St~vVL~GhSTGcQdi~yY 124 (299)
T KOG4840|consen 55 TTMLNRYLDENSWSLVQPQLRSSYNGYGT---FSL-----KDDVEDLKCLLEHIQLCGF--STDVVLVGHSTGCQDIMYY 124 (299)
T ss_pred HHHHHHHHhhccceeeeeecccccccccc---ccc-----cccHHHHHHHHHHhhccCc--ccceEEEecCccchHHHHH
Confidence 34567788899999999988854 22331 111 2347888888887765542 3489999999999999988
Q ss_pred Hhc--CCCeeEEEEEcCccCCcc
Q 008274 451 LAR--FPDVFQCAVSGAPVTSWD 471 (571)
Q Consensus 451 ~~~--~~~~~~~~v~~~~~~~~~ 471 (571)
+.+ .+..+.++|+.+|+.|-+
T Consensus 125 lTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 125 LTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred HHhccchHHHHHHHHhCccchhh
Confidence 843 356688999999999865
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0001 Score=66.87 Aligned_cols=90 Identities=14% Similarity=0.149 Sum_probs=48.7
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcE---EEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGIL---VWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~---v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
|| |++||...... ..|..+++.|.++||. |+.++|-...... . ....... ....+++.++++.+++
T Consensus 3 PV-VlVHG~~~~~~------~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~-~-~~~~~~~--~~~~~~l~~fI~~Vl~ 71 (219)
T PF01674_consen 3 PV-VLVHGTGGNAY------SNWSTLAPYLKAAGYCDSEVYALTYGSGNGSP-S-VQNAHMS--CESAKQLRAFIDAVLA 71 (219)
T ss_dssp -E-EEE--TTTTTC------GGCCHHHHHHHHTT--CCCEEEE--S-CCHHT-H-HHHHHB---HHHHHHHHHHHHHHHH
T ss_pred CE-EEECCCCcchh------hCHHHHHHHHHHcCCCcceeEeccCCCCCCCC-c-ccccccc--hhhHHHHHHHHHHHHH
Confidence 55 55899665322 3456678999999999 7999995433211 1 1111100 0113456666666655
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
.- .. +|-|+|||+||.++-+++..
T Consensus 72 ~T--Ga-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 72 YT--GA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HH--T---EEEEEETCHHHHHHHHHHH
T ss_pred hh--CC-EEEEEEcCCcCHHHHHHHHH
Confidence 42 34 89999999999999888753
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.039 Score=50.36 Aligned_cols=170 Identities=11% Similarity=0.100 Sum_probs=90.9
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEec
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK 184 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~ 184 (571)
.+..+.+..+..|+||.+.+ ..+++. .+.+-|+++|+.++........-.. ..|++ ++.-++...|
T Consensus 60 ~GHsH~v~dv~~s~dg~~al-S~swD~---~lrlWDl~~g~~t~~f~GH~~dVls--va~s~--------dn~qivSGSr 125 (315)
T KOG0279|consen 60 TGHSHFVSDVVLSSDGNFAL-SASWDG---TLRLWDLATGESTRRFVGHTKDVLS--VAFST--------DNRQIVSGSR 125 (315)
T ss_pred eccceEecceEEccCCceEE-eccccc---eEEEEEecCCcEEEEEEecCCceEE--EEecC--------CCceeecCCC
Confidence 45577899999999997544 334443 3778899999887765532221110 01111 2223333333
Q ss_pred CCccEEEEEeCCCceeeceeecC-eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe-cCCCce
Q 008274 185 TGFRHLYLHDINGTCLGPITEGD-WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL-TNGKGK 262 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l-t~~~g~ 262 (571)
+- -|-+++.-+...-.++.+. .+.-..+.|+|.....++.+.-.+. ...++ ++ ++- +.+.- ....++
T Consensus 126 Dk--Tiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk-tvKvW--nl--~~~----~l~~~~~gh~~~ 194 (315)
T KOG0279|consen 126 DK--TIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK-TVKVW--NL--RNC----QLRTTFIGHSGY 194 (315)
T ss_pred cc--eeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc-eEEEE--cc--CCc----chhhcccccccc
Confidence 32 2444454555444444432 3334455799986444444443321 24444 44 221 11111 112233
Q ss_pred -EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 263 -HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 263 -~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
..+.+||||...+. ...-.++++.++..++.+..+..
T Consensus 195 v~t~~vSpDGslcas----Ggkdg~~~LwdL~~~k~lysl~a 232 (315)
T KOG0279|consen 195 VNTVTVSPDGSLCAS----GGKDGEAMLWDLNEGKNLYSLEA 232 (315)
T ss_pred EEEEEECCCCCEEec----CCCCceEEEEEccCCceeEeccC
Confidence 34589999985433 45667899999988776555443
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.013 Score=58.55 Aligned_cols=170 Identities=14% Similarity=0.068 Sum_probs=84.5
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-----CeeeccCCcccCCCCCccCCCeEEEE
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-----SWVNLHDCFTPLDKGVTKYSGGFIWA 181 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-----~w~~~~~~~~~~~~~~~~~~d~~~~~ 181 (571)
...+.....|+|||++++...+..+ .|-.+|.++++...+...... ...-.++.+ +.+|.
T Consensus 170 ~g~~~~D~~~dpdgry~~va~~~sn---~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~------------g~vw~ 234 (369)
T PF02239_consen 170 VGRFPHDGGFDPDGRYFLVAANGSN---KIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGF------------GPVWA 234 (369)
T ss_dssp --TTEEEEEE-TTSSEEEEEEGGGT---EEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTT------------EEEEE
T ss_pred ccccccccccCcccceeeecccccc---eeEEEeeccceEEEEeeccccccccccccccCCCc------------ceEEe
Confidence 3456677899999997665544432 699999999876655432111 000001111 23333
Q ss_pred EecCCccEEEEEe--------CCC-ceeeceee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCC
Q 008274 182 SEKTGFRHLYLHD--------ING-TCLGPITE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE 251 (571)
Q Consensus 182 s~~~g~~~l~~~~--------~~~-~~~~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~ 251 (571)
....+..-+-.+. ... +..+.+.. +.- -+...+|++++|++...... ....+..++. ..- .
T Consensus 235 ~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g---lFi~thP~s~~vwvd~~~~~-~~~~v~viD~--~tl---~ 305 (369)
T PF02239_consen 235 TSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG---LFIKTHPDSRYVWVDTFLNP-DADTVQVIDK--KTL---K 305 (369)
T ss_dssp EEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS-----EE--TT-SEEEEE-TT-S-SHT-EEEEEC--CGT---E
T ss_pred eccccceecccccCCccccchhhcCeEEEEEECCCCc---ceeecCCCCccEEeeccCCC-CCceEEEEEC--cCc---c
Confidence 3222222111111 111 11222321 111 13346899999999854332 2578888887 221 0
Q ss_pred CCeEecCCCc--eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 252 APVKLTNGKG--KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 252 ~~~~lt~~~g--~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
....+....+ ...+.|++||+++.++.-.... .|.++|..+.+..+++.
T Consensus 306 ~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~--~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 306 VVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNG--AIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp EEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TT--EEEEEETTTTEEEEEEE
T ss_pred eeEEEeccCCCcEeccEECCCCCEEEEEEecCCC--EEEEEECCCcEEEEEEE
Confidence 2234443334 5667999999988776655443 89999988887776664
|
... |
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.026 Score=56.40 Aligned_cols=128 Identities=10% Similarity=0.037 Sum_probs=61.5
Q ss_pred EEEEEECCCCceE-EEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecCCee
Q 008274 81 RLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~~w~ 158 (571)
.|.++|+.+++.. .+.. .....+++.|+||++++...... + .+.++|.+|.+... |.........
T Consensus 59 ~vsviD~~~~~~v~~i~~----------G~~~~~i~~s~DG~~~~v~n~~~-~--~v~v~D~~tle~v~~I~~~~~~~~~ 125 (369)
T PF02239_consen 59 TVSVIDLATGKVVATIKV----------GGNPRGIAVSPDGKYVYVANYEP-G--TVSVIDAETLEPVKTIPTGGMPVDG 125 (369)
T ss_dssp EEEEEETTSSSEEEEEE-----------SSEEEEEEE--TTTEEEEEEEET-T--EEEEEETTT--EEEEEE--EE-TTT
T ss_pred eEEEEECCcccEEEEEec----------CCCcceEEEcCCCCEEEEEecCC-C--ceeEeccccccceeecccccccccc
Confidence 4688999988754 3332 33456689999999775553333 2 48899999988644 3221110000
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCce---eeceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC---LGPITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~---~~~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
..++...+- .+...+.|++.-.+ -.+++++|....+ .+.+..+.+- .+. .|++++++++...+
T Consensus 126 -~~~Rv~aIv--~s~~~~~fVv~lkd--~~~I~vVdy~d~~~~~~~~i~~g~~~-~D~-~~dpdgry~~va~~ 191 (369)
T PF02239_consen 126 -PESRVAAIV--ASPGRPEFVVNLKD--TGEIWVVDYSDPKNLKVTTIKVGRFP-HDG-GFDPDGRYFLVAAN 191 (369)
T ss_dssp -S---EEEEE--E-SSSSEEEEEETT--TTEEEEEETTTSSCEEEEEEE--TTE-EEE-EE-TTSSEEEEEEG
T ss_pred -cCCCceeEE--ecCCCCEEEEEEcc--CCeEEEEEeccccccceeeecccccc-ccc-ccCcccceeeeccc
Confidence 000000000 01112224443333 3478999865542 2333334432 233 49999998888654
|
... |
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00022 Score=66.12 Aligned_cols=141 Identities=14% Similarity=0.098 Sum_probs=79.8
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCc--EEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGI--LVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
+..++||+||... .|.......++.....|+ .++.+..|..+.- ..+.... ........++...+..|.
T Consensus 17 ~~~vlvfVHGyn~------~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~-~~Y~~d~--~~a~~s~~~l~~~L~~L~ 87 (233)
T PF05990_consen 17 DKEVLVFVHGYNN------SFEDALRRAAQLAHDLGFPGVVILFSWPSDGSL-LGYFYDR--ESARFSGPALARFLRDLA 87 (233)
T ss_pred CCeEEEEEeCCCC------CHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCh-hhhhhhh--hhHHHHHHHHHHHHHHHH
Confidence 4579999999433 233333334555555554 7899998865532 1111111 011112344555666665
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhc----CC-----CeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCC
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLAR----FP-----DVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSS 496 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~----~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s 496 (571)
+.. ...+|.|++||||+.+.+.++.. .+ .+|..+++.+|-.+...+...+
T Consensus 88 ~~~--~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~------------------- 146 (233)
T PF05990_consen 88 RAP--GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQL------------------- 146 (233)
T ss_pred hcc--CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHH-------------------
Confidence 542 46799999999999999887654 11 2455666666655432211111
Q ss_pred cchhhccCCCcEEEEecCCCCCCC
Q 008274 497 VMHHVHKMKGKLLLVHGMIDENVH 520 (571)
Q Consensus 497 ~~~~~~~~~~p~lli~G~~D~~v~ 520 (571)
..+.+...++.+.+..+|....
T Consensus 147 --~~~~~~~~~itvy~s~~D~AL~ 168 (233)
T PF05990_consen 147 --PDLGSSARRITVYYSRNDRALK 168 (233)
T ss_pred --HHHhhcCCCEEEEEcCCchHHH
Confidence 1233344688888888886443
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00032 Score=71.99 Aligned_cols=135 Identities=15% Similarity=0.108 Sum_probs=79.0
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc-----------cchhhhHHHHhCCcEEEEECC-CCCCC
Q 008274 329 GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN-----------TVDMRAQYLRSKGILVWKLDN-RGTAR 396 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~-----------~~~~~~~~l~~~G~~v~~~d~-rG~~~ 396 (571)
+..+..|++..... ++..|+|++++|||+.......|.. ........+.+. ..++.+|. +|+|.
T Consensus 60 ~~~lFyw~~~s~~~---~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~ 135 (462)
T PTZ00472 60 DKHYFYWAFGPRNG---NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGF 135 (462)
T ss_pred CceEEEEEEEcCCC---CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCc
Confidence 56788888876542 3567999999999998653222100 000001122222 46777785 57665
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcC----------CCeeEEEEEcC
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARF----------PDVFQCAVSGA 465 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~----------~~~~~~~v~~~ 465 (571)
+-..... ....-....+|+.++++.+.++ +.....++.|+|+||||..+-.++..- .-.+++++.+.
T Consensus 136 S~~~~~~--~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGN 213 (462)
T PTZ00472 136 SYADKAD--YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGN 213 (462)
T ss_pred ccCCCCC--CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEec
Confidence 4321110 0000012356777777766554 444568999999999999887666531 11367888888
Q ss_pred ccCC
Q 008274 466 PVTS 469 (571)
Q Consensus 466 ~~~~ 469 (571)
|+++
T Consensus 214 g~~d 217 (462)
T PTZ00472 214 GLTD 217 (462)
T ss_pred cccC
Confidence 8764
|
|
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.066 Score=49.77 Aligned_cols=276 Identities=11% Similarity=0.053 Sum_probs=136.7
Q ss_pred eeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEE-----------eecCCCCC-CCCCcccccCCCCCCCCceEEEEE
Q 008274 17 IAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRI-----------MHQGKSSV-GSEAQEDHAYPFAGASNVKVRLGV 84 (571)
Q Consensus 17 ~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~y~~~g~~~~~~~l~~ 84 (571)
++.|...+...+.+|+||..++-.+.++.. ..|.. ..|+-+.. +.......-+... .....|..
T Consensus 9 ~f~~~~~~i~sl~fs~~G~~litss~dDsl-~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sSt---k~d~tIry 84 (311)
T KOG1446|consen 9 VFRETNGKINSLDFSDDGLLLITSSEDDSL-RLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSST---KEDDTIRY 84 (311)
T ss_pred ccccCCCceeEEEecCCCCEEEEecCCCeE-EEEEcCCCceeeEeecccccccEEEEecCCceEEEccC---CCCCceEE
Confidence 344444677899999999998764433221 11111 11111100 0001111111111 11135666
Q ss_pred EECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCc
Q 008274 85 VSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCF 164 (571)
Q Consensus 85 ~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~ 164 (571)
.++.+.+-.+. + .+....+..+.-+|-+...+-.+... .|.+.|+...+++-+.......
T Consensus 85 Lsl~dNkylRY-F-------~GH~~~V~sL~~sP~~d~FlS~S~D~----tvrLWDlR~~~cqg~l~~~~~p-------- 144 (311)
T KOG1446|consen 85 LSLHDNKYLRY-F-------PGHKKRVNSLSVSPKDDTFLSSSLDK----TVRLWDLRVKKCQGLLNLSGRP-------- 144 (311)
T ss_pred EEeecCceEEE-c-------CCCCceEEEEEecCCCCeEEecccCC----eEEeeEecCCCCceEEecCCCc--------
Confidence 77776654443 1 23456788888999775333332222 2777788777777665533221
Q ss_pred ccCCCCCccCCCeEEEEEecCCccEEEEEeCC---Ccee--eceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 165 TPLDKGVTKYSGGFIWASEKTGFRHLYLHDIN---GTCL--GPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 165 ~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~---~~~~--~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
+. +.+|.|++|..-.++- .|-++|+. .+.. -.++.++. +...+ .+|+||+.|..+++.. .+|
T Consensus 145 --i~---AfDp~GLifA~~~~~~-~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l-~FS~dGK~iLlsT~~s-----~~~ 212 (311)
T KOG1446|consen 145 --IA---AFDPEGLIFALANGSE-LIKLYDLRSFDKGPFTTFSITDNDEAEWTDL-EFSPDGKSILLSTNAS-----FIY 212 (311)
T ss_pred --ce---eECCCCcEEEEecCCC-eEEEEEecccCCCCceeEccCCCCccceeee-EEcCCCCEEEEEeCCC-----cEE
Confidence 11 3467787665433222 45555542 2222 22332221 22333 5999999999987643 355
Q ss_pred EEEeCCCCCCCCCCCeEecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCC
Q 008274 239 CAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLE 317 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 317 (571)
.++.- +|... ......+... -...++++|||++++- .+.. ..|++.++.++.++..+..... .......+
T Consensus 213 ~lDAf-~G~~~-~tfs~~~~~~~~~~~a~ftPds~Fvl~-gs~d---g~i~vw~~~tg~~v~~~~~~~~--~~~~~~~f- 283 (311)
T KOG1446|consen 213 LLDAF-DGTVK-STFSGYPNAGNLPLSATFTPDSKFVLS-GSDD---GTIHVWNLETGKKVAVLRGPNG--GPVSCVRF- 283 (311)
T ss_pred EEEcc-CCcEe-eeEeeccCCCCcceeEEECCCCcEEEE-ecCC---CcEEEEEcCCCcEeeEecCCCC--CCcccccc-
Confidence 55542 34200 0111111111 1246689999986543 3332 3688888888887665544211 11122233
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPD 340 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~ 340 (571)
.|+...+-+.+ ..|.. |.|.
T Consensus 284 nP~~~mf~sa~-s~l~f--w~p~ 303 (311)
T KOG1446|consen 284 NPRYAMFVSAS-SNLVF--WLPD 303 (311)
T ss_pred CCceeeeeecC-ceEEE--Eecc
Confidence 55666666544 33443 4554
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.003 Score=56.69 Aligned_cols=226 Identities=17% Similarity=0.112 Sum_probs=114.2
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CC--cEEEEECCCCCCCChhhhHHHH
Q 008274 329 GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KG--ILVWKLDNRGTARRGLKFEASI 405 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G--~~v~~~d~rG~~~~~~~~~~~~ 405 (571)
|.+.....+.|--.++ ....|+++++.|.||...+ |..++..|.. .+ .-++.+-.-|+..-........
T Consensus 10 gl~~si~~~~~~v~~~-~~~~~li~~IpGNPG~~gF-------Y~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~ 81 (301)
T KOG3975|consen 10 GLPTSILTLKPWVTKS-GEDKPLIVWIPGNPGLLGF-------YTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDH 81 (301)
T ss_pred CCcccceeeeeeeccC-CCCceEEEEecCCCCchhH-------HHHHHHHHHHhcccccceeEEeccccccCCccccccc
Confidence 3344444445533211 1467999999999997542 2233444432 22 4477776666543221111111
Q ss_pred -hccCCCCCchhHHH-HHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC--eeEEEEEcCccCC--------cc--
Q 008274 406 -KHNCGRIDAEDQLT-GAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD--VFQCAVSGAPVTS--------WD-- 471 (571)
Q Consensus 406 -~~~~~~~~~~D~~~-~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~--~~~~~v~~~~~~~--------~~-- 471 (571)
..+.....++|++. -++++.+. .....++.++|||-|++|++.++-.... .+..+++.-|-.. +.
T Consensus 82 s~~~~eifsL~~QV~HKlaFik~~-~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t 160 (301)
T KOG3975|consen 82 SHTNEEIFSLQDQVDHKLAFIKEY-VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLT 160 (301)
T ss_pred ccccccccchhhHHHHHHHHHHHh-CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEee
Confidence 11112233555554 45555543 2255799999999999999999874322 2344444444211 00
Q ss_pred -------------c-----ccchhh----hhhcC----CCCCC---hhhhccCCc-------------------chhhcc
Q 008274 472 -------------G-----YDTFYT----EKYMG----LPSED---PVGYEYSSV-------------------MHHVHK 503 (571)
Q Consensus 472 -------------~-----~~~~~~----~~~~g----~~~~~---~~~~~~~s~-------------------~~~~~~ 503 (571)
. +.+.+. .+++. .|.+- +-.+...+. ...+++
T Consensus 161 ~~l~~~~hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~ee 240 (301)
T KOG3975|consen 161 KVLRYLPHVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEE 240 (301)
T ss_pred eeeeeehhhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHh
Confidence 0 000000 01110 11100 000000000 011222
Q ss_pred CCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 504 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 504 ~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
-.+-+.+..|+.|..||.+....+.+.+.+. ++++-. .+..|.|-- .....+...+.+.|
T Consensus 241 n~d~l~Fyygt~DgW~p~~~~d~~kdd~~ee--d~~Lde-dki~HAFV~-~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 241 NLDSLWFYYGTNDGWVPSHYYDYYKDDVPEE--DLKLDE-DKIPHAFVV-KHAQYMANAVFDMI 300 (301)
T ss_pred cCcEEEEEccCCCCCcchHHHHHHhhhcchh--ceeecc-ccCCcceee-cccHHHHHHHHHhh
Confidence 2357889999999999999888888877543 455544 788999833 22333444454443
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0079 Score=56.90 Aligned_cols=115 Identities=14% Similarity=0.129 Sum_probs=70.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-Ceee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~ 159 (571)
.++-+|-..|+...+..-...+.-..+......+..||||++ ++++||..+...+|.+|..+|+.+.+...... .| +
T Consensus 216 ~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrF-LYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~-P 293 (346)
T COG2706 216 DVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRF-LYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQF-P 293 (346)
T ss_pred EEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCE-EEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcC-C
Confidence 445555555666555332222222345667788999999975 45569999888999999999987665443222 11 0
Q ss_pred ccCCcccCCCCCccCCCeEEEEE-ecCCccEEEEEeCCCceeeceee
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWAS-EKTGFRHLYLHDINGTCLGPITE 205 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s-~~~g~~~l~~~~~~~~~~~~lT~ 205 (571)
+.|... +.+.+++.+ .++..-.+|.++.++|+...+..
T Consensus 294 --R~F~i~------~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~ 332 (346)
T COG2706 294 --RDFNIN------PSGRFLIAANQKSDNITVFERDKETGRLTLLGR 332 (346)
T ss_pred --ccceeC------CCCCEEEEEccCCCcEEEEEEcCCCceEEeccc
Confidence 112221 223355554 44556788999988887766654
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0051 Score=59.86 Aligned_cols=152 Identities=14% Similarity=0.090 Sum_probs=96.1
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|+-||..||+-..+ -.+.+|+..++....+
T Consensus 238 VT~L~Wn~~G~~LatG~~~------------------------------------G~~riw~~~G~l~~tl--------- 272 (524)
T KOG0273|consen 238 VTSLDWNNDGTLLATGSED------------------------------------GEARIWNKDGNLISTL--------- 272 (524)
T ss_pred cceEEecCCCCeEEEeecC------------------------------------cEEEEEecCchhhhhh---------
Confidence 3568899999999885543 1357788887765544
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEec
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK 184 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~ 184 (571)
....+.+..+.|+.+|.+|+...-.. .+.+.|..+|++++.....+..-++. .|-++.=+..+..
T Consensus 273 ~~HkgPI~slKWnk~G~yilS~~vD~----ttilwd~~~g~~~q~f~~~s~~~lDV-----------dW~~~~~F~ts~t 337 (524)
T KOG0273|consen 273 GQHKGPIFSLKWNKKGTYILSGGVDG----TTILWDAHTGTVKQQFEFHSAPALDV-----------DWQSNDEFATSST 337 (524)
T ss_pred hccCCceEEEEEcCCCCEEEeccCCc----cEEEEeccCceEEEeeeeccCCccce-----------EEecCceEeecCC
Confidence 23556788999999999776543222 37889999999988765433211111 1222222334556
Q ss_pred CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE
Q 008274 185 TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 241 (571)
+|--++|.++.+....+..- ..-++..+ .|+|.|..|.-. +.++ ...||.+.
T Consensus 338 d~~i~V~kv~~~~P~~t~~G-H~g~V~al-k~n~tg~LLaS~-SdD~--TlkiWs~~ 389 (524)
T KOG0273|consen 338 DGCIHVCKVGEDRPVKTFIG-HHGEVNAL-KWNPTGSLLASC-SDDG--TLKIWSMG 389 (524)
T ss_pred CceEEEEEecCCCcceeeec-ccCceEEE-EECCCCceEEEe-cCCC--eeEeeecC
Confidence 77778889887665444443 44455555 598888755444 4444 37888765
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.12 Score=54.44 Aligned_cols=118 Identities=13% Similarity=0.077 Sum_probs=64.0
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~ 185 (571)
....+..+.|+|++..++.....++ .|.+.|+.+++........ .. ... ..|++++ ++..+..+
T Consensus 124 H~~~V~sVaf~P~g~~iLaSgS~Dg---tIrIWDl~tg~~~~~i~~~-~~-------V~S----lswspdG~lLat~s~D 188 (568)
T PTZ00420 124 HKKKISIIDWNPMNYYIMCSSGFDS---FVNIWDIENEKRAFQINMP-KK-------LSS----LKWNIKGNLLSGTCVG 188 (568)
T ss_pred CCCcEEEEEECCCCCeEEEEEeCCC---eEEEEECCCCcEEEEEecC-Cc-------EEE----EEECCCCCEEEEEecC
Confidence 4456888999999986554444432 3778899888743222111 10 001 1345555 55555444
Q ss_pred CccEEEEEeCCCcee-eceeecCeEE----EEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 186 GFRHLYLHDINGTCL-GPITEGDWMV----EQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 186 g~~~l~~~~~~~~~~-~~lT~~~~~~----~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
+ .|.++|+.+++. ..+....... ..+..+++++++|+.++.... ..+++..+++
T Consensus 189 ~--~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~-~~R~VkLWDl 247 (568)
T PTZ00420 189 K--HMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKN-NMREMKLWDL 247 (568)
T ss_pred C--EEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCC-CccEEEEEEC
Confidence 4 467777766543 2232221111 112235578887777775543 2466777776
|
|
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0019 Score=62.62 Aligned_cols=207 Identities=13% Similarity=0.099 Sum_probs=116.2
Q ss_pred eeeeecccceeeeeccC----------------CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccC
Q 008274 7 VLQTHGLAEYIAQEEMD----------------RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAY 70 (571)
Q Consensus 7 ~~~~~g~~~~~~~~~~~----------------~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 70 (571)
+.++.|...|+|.=++. ....+..||||++||..-..
T Consensus 272 ~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~--------------------------- 324 (514)
T KOG2055|consen 272 VIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNN--------------------------- 324 (514)
T ss_pred EEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccC---------------------------
Confidence 66777888887753321 12346689999988774321
Q ss_pred CCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEE
Q 008274 71 PFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL 150 (571)
Q Consensus 71 ~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~ 150 (571)
..|++....+++... + ...++.+..++|+.||+.|+.+...+ +||..|+....+....
T Consensus 325 ---------G~I~lLhakT~eli~-s--------~KieG~v~~~~fsSdsk~l~~~~~~G----eV~v~nl~~~~~~~rf 382 (514)
T KOG2055|consen 325 ---------GHIHLLHAKTKELIT-S--------FKIEGVVSDFTFSSDSKELLASGGTG----EVYVWNLRQNSCLHRF 382 (514)
T ss_pred ---------ceEEeehhhhhhhhh-e--------eeeccEEeeEEEecCCcEEEEEcCCc----eEEEEecCCcceEEEE
Confidence 246777777766421 1 12467888999999998777664444 4999999987654432
Q ss_pred EeecCCeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEe--CCCceeeceeec-C--eEEEEEEEEeecCcEEE
Q 008274 151 VEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHD--INGTCLGPITEG-D--WMVEQIVGVNEASGQVY 224 (571)
Q Consensus 151 ~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~--~~~~~~~~lT~~-~--~~~~~~~~~s~dg~~l~ 224 (571)
...+. + .+..+. .+.++ ++.+-.+.|.-+||-.+ ..+++++++..- + ..+.+. .|++|+..|.
T Consensus 383 ~D~G~--v-~gts~~-------~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl-~Fn~d~qiLA 451 (514)
T KOG2055|consen 383 VDDGS--V-HGTSLC-------ISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSL-QFNHDAQILA 451 (514)
T ss_pred eecCc--c-ceeeee-------ecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeee-eeCcchhhhh
Confidence 22111 0 011111 13333 55555667888888865 234445555431 1 233444 5999998887
Q ss_pred EEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEE
Q 008274 225 FTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDF 277 (571)
Q Consensus 225 ~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~ 277 (571)
+.++... ..+..+.+.+-.- --+.|..-+.-.....+.|||.|.++++-
T Consensus 452 iaS~~~k---nalrLVHvPS~TV-FsNfP~~n~~vg~vtc~aFSP~sG~lAvG 500 (514)
T KOG2055|consen 452 IASRVKK---NALRLVHVPSCTV-FSNFPTSNTKVGHVTCMAFSPNSGYLAVG 500 (514)
T ss_pred hhhhccc---cceEEEeccceee-eccCCCCCCcccceEEEEecCCCceEEee
Confidence 7776543 2222222211000 00123332222234556999998888764
|
|
| >KOG1273 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.025 Score=52.52 Aligned_cols=233 Identities=12% Similarity=0.082 Sum_probs=122.1
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCce-EEEeccCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPV-SWMDLQCGG 101 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~-~~~~~~~~~ 101 (571)
.-...+.||+||++|.=.+.+ . .+-+||+-.|.. +++.+
T Consensus 66 ~pi~sl~WS~dgr~LltsS~D-~-----------------------------------si~lwDl~~gs~l~rirf---- 105 (405)
T KOG1273|consen 66 RPITSLCWSRDGRKLLTSSRD-W-----------------------------------SIKLWDLLKGSPLKRIRF---- 105 (405)
T ss_pred cceeEEEecCCCCEeeeecCC-c-----------------------------------eeEEEeccCCCceeEEEc----
Confidence 335668899999998554433 1 356788776653 44433
Q ss_pred CCCCCCCceeEEEEEccCC--eEEEEEEeccCccEEEEEEECCCCceEEEEEeecCC--eeeccCCcccCCCCCccCCC-
Q 008274 102 TDQNYDEEYLARVNWMHGN--ILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS--WVNLHDCFTPLDKGVTKYSG- 176 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg--~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~--w~~~~~~~~~~~~~~~~~~d- 176 (571)
+..+....|-|-. +.++...+.. =++++...+..+.|....+.. ....... .+..
T Consensus 106 ------~spv~~~q~hp~k~n~~va~~~~~s-----p~vi~~s~~~h~~Lp~d~d~dln~sas~~~---------fdr~g 165 (405)
T KOG1273|consen 106 ------DSPVWGAQWHPRKRNKCVATIMEES-----PVVIDFSDPKHSVLPKDDDGDLNSSASHGV---------FDRRG 165 (405)
T ss_pred ------cCccceeeeccccCCeEEEEEecCC-----cEEEEecCCceeeccCCCcccccccccccc---------ccCCC
Confidence 2344456788743 3444444333 255666666666665543321 1111111 1222
Q ss_pred eEEEEEecCCccEEEEEeCCCcee---eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE-eCCCCCCCCCC
Q 008274 177 GFIWASEKTGFRHLYLHDINGTCL---GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK-LYPDWNHTLEA 252 (571)
Q Consensus 177 ~~~~~s~~~g~~~l~~~~~~~~~~---~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~-l~~~g~~~~~~ 252 (571)
.+++.....|+-.+|- .++-+. -++|.- -.+.++. ++..|+.+.+.+.+.- -..|... +...|+.. .
T Consensus 166 ~yIitGtsKGkllv~~--a~t~e~vas~rits~-~~IK~I~-~s~~g~~liiNtsDRv---IR~ye~~di~~~~r~~--e 236 (405)
T KOG1273|consen 166 KYIITGTSKGKLLVYD--AETLECVASFRITSV-QAIKQII-VSRKGRFLIINTSDRV---IRTYEISDIDDEGRDG--E 236 (405)
T ss_pred CEEEEecCcceEEEEe--cchheeeeeeeechh-eeeeEEE-EeccCcEEEEecCCce---EEEEehhhhcccCccC--C
Confidence 3666656667655544 334321 233331 1344554 7888888887765432 3333322 21122211 1
Q ss_pred CeE------ecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEc
Q 008274 253 PVK------LTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQA 326 (571)
Q Consensus 253 ~~~------lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (571)
++. +.+...+..+-||.+|.|++... .....||+.....|..++.|..+. -+.+....+.....+....
T Consensus 237 ~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s---~~aHaLYIWE~~~GsLVKILhG~k--gE~l~DV~whp~rp~i~si 311 (405)
T KOG1273|consen 237 VEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGS---ARAHALYIWEKSIGSLVKILHGTK--GEELLDVNWHPVRPIIASI 311 (405)
T ss_pred cChhHHHHHHHhhhhhhheeecCCccEEEecc---ccceeEEEEecCCcceeeeecCCc--hhheeecccccceeeeeec
Confidence 211 11222345678999998765533 567799999987888777776542 1334444454444444444
Q ss_pred CCC
Q 008274 327 NDG 329 (571)
Q Consensus 327 ~dg 329 (571)
..|
T Consensus 312 ~sg 314 (405)
T KOG1273|consen 312 ASG 314 (405)
T ss_pred cCC
Confidence 444
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00014 Score=74.79 Aligned_cols=116 Identities=20% Similarity=0.224 Sum_probs=68.7
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCC----CchhHHHHHHHH
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRI----DAEDQLTGAEWL 424 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~----~~~D~~~~~~~l 424 (571)
-|++|++-|..... ..+. .......+..+.|-.++.+.+|-.|.+-. +......++.-. .++|+...++++
T Consensus 29 gpifl~~ggE~~~~---~~~~-~~~~~~~lA~~~~a~~v~lEHRyYG~S~P-~~~~s~~nL~yLt~~QALaD~a~F~~~~ 103 (434)
T PF05577_consen 29 GPIFLYIGGEGPIE---PFWI-NNGFMWELAKEFGALVVALEHRYYGKSQP-FGDLSTENLRYLTSEQALADLAYFIRYV 103 (434)
T ss_dssp SEEEEEE--SS-HH---HHHH-H-HHHHHHHHHHTEEEEEE--TTSTTB-T-TGGGGGSTTTC-SHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCccc---hhhh-cCChHHHHHHHcCCcEEEeehhhhcCCCC-ccccchhhHHhcCHHHHHHHHHHHHHHH
Confidence 68988885532221 1111 11233445557899999999997665531 111111122211 367888888888
Q ss_pred HHcC-CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC
Q 008274 425 IKQG-LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS 469 (571)
Q Consensus 425 ~~~~-~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~ 469 (571)
..+. ..+..+++++|.||||.+++++-.++|++|.++++.++++.
T Consensus 104 ~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 104 KKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 8653 34567999999999999999999999999999888776554
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.057 Score=53.68 Aligned_cols=188 Identities=12% Similarity=0.089 Sum_probs=96.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEec--cCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNR--SQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r--~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
..+.+|.++++...+... .....-..++++||++++..+... .......|.++.++|+.+.+......+-
T Consensus 16 ~~~~~d~~~g~l~~~~~~-------~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~- 87 (345)
T PF10282_consen 16 YVFRFDEETGTLTLVQTV-------AEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGS- 87 (345)
T ss_dssp EEEEEETTTTEEEEEEEE-------EESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSS-
T ss_pred EEEEEcCCCCCceEeeee-------cCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCC-
Confidence 344455578887665431 112233346789999877666554 3445567788888888887765432110
Q ss_pred eccCCcccCCCCCccCCC-eEEEEEec-CCccEEEEEeCCCceeeceee--------------cCeEEEEEEEEeecCcE
Q 008274 159 NLHDCFTPLDKGVTKYSG-GFIWASEK-TGFRHLYLHDINGTCLGPITE--------------GDWMVEQIVGVNEASGQ 222 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d-~~~~~s~~-~g~~~l~~~~~~~~~~~~lT~--------------~~~~~~~~~~~s~dg~~ 222 (571)
.|+.. ..+++ ++++.++- .|.-.++.++.++ ....... ..-..+.. .++|||++
T Consensus 88 ------~p~~i--~~~~~g~~l~vany~~g~v~v~~l~~~g-~l~~~~~~~~~~g~g~~~~rq~~~h~H~v-~~~pdg~~ 157 (345)
T PF10282_consen 88 ------SPCHI--AVDPDGRFLYVANYGGGSVSVFPLDDDG-SLGEVVQTVRHEGSGPNPDRQEGPHPHQV-VFSPDGRF 157 (345)
T ss_dssp ------CEEEE--EECTTSSEEEEEETTTTEEEEEEECTTS-EEEEEEEEEESEEEESSTTTTSSTCEEEE-EE-TTSSE
T ss_pred ------CcEEE--EEecCCCEEEEEEccCCeEEEEEccCCc-ccceeeeecccCCCCCcccccccccceeE-EECCCCCE
Confidence 01110 12344 37777665 4544455555443 3222210 11223444 48999999
Q ss_pred EEEEEcCCCCceeEEEEEEeCCCCC-CCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 223 VYFTGTLDGPLESHLYCAKLYPDWN-HTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 223 l~~~~~~~~~~~~~l~~~~l~~~g~-~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
+|..-...+ ...+|.++- .+. ........+..+.|-....|+|||+++..+..- + ..+.++++.
T Consensus 158 v~v~dlG~D--~v~~~~~~~--~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~-s--~~v~v~~~~ 222 (345)
T PF10282_consen 158 VYVPDLGAD--RVYVYDIDD--DTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNEL-S--NTVSVFDYD 222 (345)
T ss_dssp EEEEETTTT--EEEEEEE-T--TS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETT-T--TEEEEEEEE
T ss_pred EEEEecCCC--EEEEEEEeC--CCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCC-C--CcEEEEeec
Confidence 987644332 245555442 221 000012234555666677999999876555433 2 366666654
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.048 Score=56.43 Aligned_cols=164 Identities=10% Similarity=0.074 Sum_probs=85.6
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEEC-CCCceE-EEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEE
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDI-KTGQRK-VILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWAS 182 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~-~~g~~~-~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s 182 (571)
+....+..+.|||||++++-.+... .|.+.|+ +.+... .+..++ .++.. - .+++++ +++..
T Consensus 201 ~h~~~v~~~~fs~d~~~l~s~s~D~----tiriwd~~~~~~~~~~l~gH~--~~v~~-~---------~f~p~g~~i~Sg 264 (456)
T KOG0266|consen 201 GHTRGVSDVAFSPDGSYLLSGSDDK----TLRIWDLKDDGRNLKTLKGHS--TYVTS-V---------AFSPDGNLLVSG 264 (456)
T ss_pred ccccceeeeEECCCCcEEEEecCCc----eEEEeeccCCCeEEEEecCCC--CceEE-E---------EecCCCCEEEEe
Confidence 4566788999999999777665544 3677777 444443 332222 12211 1 123333 55544
Q ss_pred ecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc
Q 008274 183 EKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG 261 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g 261 (571)
..++- +.+.+..+++. +.|....-.+..+ .++++|+.|+-.+. ++ .+...++. .+... -...+...+.
T Consensus 265 s~D~t--vriWd~~~~~~~~~l~~hs~~is~~-~f~~d~~~l~s~s~-d~----~i~vwd~~-~~~~~--~~~~~~~~~~ 333 (456)
T KOG0266|consen 265 SDDGT--VRIWDVRTGECVRKLKGHSDGISGL-AFSPDGNLLVSASY-DG----TIRVWDLE-TGSKL--CLKLLSGAEN 333 (456)
T ss_pred cCCCc--EEEEeccCCeEEEeeeccCCceEEE-EECCCCCEEEEcCC-Cc----cEEEEECC-CCcee--eeecccCCCC
Confidence 44554 44555555544 4444433334444 48999987777643 33 33444441 12100 0112222222
Q ss_pred ---eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 262 ---KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 262 ---~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
...+.++|++++++...... .+-+.++..+...+.
T Consensus 334 ~~~~~~~~fsp~~~~ll~~~~d~----~~~~w~l~~~~~~~~ 371 (456)
T KOG0266|consen 334 SAPVTSVQFSPNGKYLLSASLDR----TLKLWDLRSGKSVGT 371 (456)
T ss_pred CCceeEEEECCCCcEEEEecCCC----eEEEEEccCCcceee
Confidence 24568999999887654332 456666655554443
|
|
| >KOG2139 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0049 Score=58.04 Aligned_cols=153 Identities=14% Similarity=0.165 Sum_probs=90.5
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~ 185 (571)
+..++....|.+||..++..+-.+ ..|-+-|+++|....|....-++. +-+ -|+||+ .+|.+.-+
T Consensus 194 gh~pVtsmqwn~dgt~l~tAS~gs---ssi~iWdpdtg~~~pL~~~glgg~-------slL----kwSPdgd~lfaAt~d 259 (445)
T KOG2139|consen 194 GHNPVTSMQWNEDGTILVTASFGS---SSIMIWDPDTGQKIPLIPKGLGGF-------SLL----KWSPDGDVLFAATCD 259 (445)
T ss_pred CCceeeEEEEcCCCCEEeecccCc---ceEEEEcCCCCCcccccccCCCce-------eeE----EEcCCCCEEEEeccc
Confidence 456889999999999887765544 348888999998888752211111 111 356766 66655555
Q ss_pred CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCC----C----------
Q 008274 186 GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTL----E---------- 251 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~----~---------- 251 (571)
+-..||..+-.-.+.+.++... .+... .|+|+|+.|.|+.... .-||++.. ++...+ .
T Consensus 260 avfrlw~e~q~wt~erw~lgsg-rvqta-cWspcGsfLLf~~sgs----p~lysl~f--~~~~~~~~~~~~~k~~lliaD 331 (445)
T KOG2139|consen 260 AVFRLWQENQSWTKERWILGSG-RVQTA-CWSPCGSFLLFACSGS----PRLYSLTF--DGEDSVFLRPQSIKRVLLIAD 331 (445)
T ss_pred ceeeeehhcccceecceeccCC-ceeee-eecCCCCEEEEEEcCC----ceEEEEee--cCCCccccCcccceeeeeecc
Confidence 6556774432222333343322 34444 4999999999998643 45676665 221000 0
Q ss_pred -------CCeEecCCCceEEEEECCCCCEEEEEeeCCC
Q 008274 252 -------APVKLTNGKGKHVAVLDHNMRNFVDFHDSLD 282 (571)
Q Consensus 252 -------~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~ 282 (571)
..+++-+ .+....++.|.|.+++.++...+
T Consensus 332 L~e~ti~ag~~l~c-geaq~lawDpsGeyLav~fKg~~ 368 (445)
T KOG2139|consen 332 LQEVTICAGQRLCC-GEAQCLAWDPSGEYLAVIFKGQS 368 (445)
T ss_pred chhhhhhcCccccc-CccceeeECCCCCEEEEEEcCCc
Confidence 0011111 12345589999999998887643
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0021 Score=61.53 Aligned_cols=184 Identities=13% Similarity=0.159 Sum_probs=101.3
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.+....+|.|+|++|+=++.|. .-.+||+.+++...+.
T Consensus 262 ~RVs~VafHPsG~~L~TasfD~------------------------------------tWRlWD~~tk~ElL~Q------ 299 (459)
T KOG0272|consen 262 ARVSRVAFHPSGKFLGTASFDS------------------------------------TWRLWDLETKSELLLQ------ 299 (459)
T ss_pred hhheeeeecCCCceeeeccccc------------------------------------chhhcccccchhhHhh------
Confidence 3556778888888887666552 2267899998765442
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWAS 182 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s 182 (571)
.+....+.+++|-|||++++.-.... ...|| |+.+|.+.-....-... .+.- .|+|+|+...+
T Consensus 300 --EGHs~~v~~iaf~~DGSL~~tGGlD~--~~RvW--DlRtgr~im~L~gH~k~------I~~V-----~fsPNGy~lAT 362 (459)
T KOG0272|consen 300 --EGHSKGVFSIAFQPDGSLAATGGLDS--LGRVW--DLRTGRCIMFLAGHIKE------ILSV-----AFSPNGYHLAT 362 (459)
T ss_pred --cccccccceeEecCCCceeeccCccc--hhhee--ecccCcEEEEecccccc------eeeE-----eECCCceEEee
Confidence 23566788999999998766532222 22344 78888765443321111 1111 46788865543
Q ss_pred e-cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC-
Q 008274 183 E-KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK- 260 (571)
Q Consensus 183 ~-~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~- 260 (571)
. .++.-.||-+.-. ...-.+....-.|..+ .++|+.++...++.-++- .+||.-. ++. ..+.|..-+
T Consensus 363 gs~Dnt~kVWDLR~r-~~ly~ipAH~nlVS~V-k~~p~~g~fL~TasyD~t--~kiWs~~---~~~----~~ksLaGHe~ 431 (459)
T KOG0272|consen 363 GSSDNTCKVWDLRMR-SELYTIPAHSNLVSQV-KYSPQEGYFLVTASYDNT--VKIWSTR---TWS----PLKSLAGHEG 431 (459)
T ss_pred cCCCCcEEEeeeccc-ccceecccccchhhhe-EecccCCeEEEEcccCcc--eeeecCC---Ccc----cchhhcCCcc
Confidence 2 2343344433211 1112222222233444 488876666666665553 6777532 232 333444323
Q ss_pred ceEEEEECCCCCEEEE
Q 008274 261 GKHVAVLDHNMRNFVD 276 (571)
Q Consensus 261 g~~~~~~s~~g~~~v~ 276 (571)
-..++..|+|+.+++-
T Consensus 432 kV~s~Dis~d~~~i~t 447 (459)
T KOG0272|consen 432 KVISLDISPDSQAIAT 447 (459)
T ss_pred ceEEEEeccCCceEEE
Confidence 3556788999876643
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.067 Score=53.18 Aligned_cols=97 Identities=13% Similarity=0.021 Sum_probs=53.1
Q ss_pred eeeeeeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEE
Q 008274 4 AFHVLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 83 (571)
Q Consensus 4 ~~~~~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 83 (571)
.|+.+|-|...-.+|.|.-.-..--.+||.|-+||= -|..+ .+.
T Consensus 41 v~ir~i~~~~~~~iYtEH~~~vtVAkySPsG~yiAS--GD~sG----------------------------------~vR 84 (603)
T KOG0318|consen 41 VIIRNIDNPASVDIYTEHAHQVTVAKYSPSGFYIAS--GDVSG----------------------------------KVR 84 (603)
T ss_pred EEEEECCCccceeeeccccceeEEEEeCCCceEEee--cCCcC----------------------------------cEE
Confidence 566777777777777775322333447887765432 22111 356
Q ss_pred EEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECC
Q 008274 84 VVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK 142 (571)
Q Consensus 84 ~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~ 142 (571)
+||-...+.. |.-+ +....+.+..++|++|+++|+.+-+..++--.+|..|..
T Consensus 85 IWdtt~~~hi-LKne-----f~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG 137 (603)
T KOG0318|consen 85 IWDTTQKEHI-LKNE-----FQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSG 137 (603)
T ss_pred EEeccCccee-eeee-----eeecccccccceeCCCCcEEEEEecCccceeEEEEecCC
Confidence 6666543221 1110 112345667789999999888775444333344544443
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00025 Score=71.65 Aligned_cols=88 Identities=15% Similarity=-0.022 Sum_probs=60.1
Q ss_pred cchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHH
Q 008274 371 TVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAIT 450 (571)
Q Consensus 371 ~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 450 (571)
.|..+++.|.+.||.+ ..|++|.+..-+. .. .....++++.+.++.+.+.. ...++.|+||||||.++..+
T Consensus 109 ~~~~li~~L~~~GY~~-~~dL~g~gYDwR~---~~---~~~~~~~~Lk~lIe~~~~~~--g~~kV~LVGHSMGGlva~~f 179 (440)
T PLN02733 109 YFHDMIEQLIKWGYKE-GKTLFGFGYDFRQ---SN---RLPETMDGLKKKLETVYKAS--GGKKVNIISHSMGGLLVKCF 179 (440)
T ss_pred HHHHHHHHHHHcCCcc-CCCcccCCCCccc---cc---cHHHHHHHHHHHHHHHHHHc--CCCCEEEEEECHhHHHHHHH
Confidence 4566789999999876 7899988754321 10 00111456666666665542 34689999999999999999
Q ss_pred HhcCCCe----eEEEEEcCcc
Q 008274 451 LARFPDV----FQCAVSGAPV 467 (571)
Q Consensus 451 ~~~~~~~----~~~~v~~~~~ 467 (571)
+..+|+. ++..|++++.
T Consensus 180 l~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 180 MSLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred HHHCCHhHHhHhccEEEECCC
Confidence 9888764 5666666553
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.016 Score=60.73 Aligned_cols=138 Identities=14% Similarity=0.174 Sum_probs=69.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~~w~~ 159 (571)
.|.+||+.+++... .+. ....+..+.|+|||+.++...... .|.++|+.+++... +..+... ..
T Consensus 149 tIrIWDl~tg~~~~-~i~--------~~~~V~SlswspdG~lLat~s~D~----~IrIwD~Rsg~~i~tl~gH~g~--~~ 213 (568)
T PTZ00420 149 FVNIWDIENEKRAF-QIN--------MPKKLSSLKWNIKGNLLSGTCVGK----HMHIIDPRKQEIASSFHIHDGG--KN 213 (568)
T ss_pred eEEEEECCCCcEEE-EEe--------cCCcEEEEEECCCCCEEEEEecCC----EEEEEECCCCcEEEEEecccCC--ce
Confidence 46889999886432 221 234577899999999776554322 38888999887542 2111111 00
Q ss_pred ccCCcccCCCCCccCCC-eEEEEEec--CCccEEEEEeCCC-ce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCce
Q 008274 160 LHDCFTPLDKGVTKYSG-GFIWASEK--TGFRHLYLHDING-TC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLE 234 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d-~~~~~s~~--~g~~~l~~~~~~~-~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 234 (571)
. ..+... .++++ ++++.+.. ...++|.++|+.. +. ...++-+.....-.+.|+++.+.+|.++..++ .
T Consensus 214 s-~~v~~~----~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~--t 286 (568)
T PTZ00420 214 T-KNIWID----GLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDG--N 286 (568)
T ss_pred e-EEEEee----eEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCC--e
Confidence 0 000000 11233 34444332 2346788888764 22 22222111111112347777777777775554 2
Q ss_pred eEEEEE
Q 008274 235 SHLYCA 240 (571)
Q Consensus 235 ~~l~~~ 240 (571)
..+|-+
T Consensus 287 Ir~~e~ 292 (568)
T PTZ00420 287 CRYYQH 292 (568)
T ss_pred EEEEEc
Confidence 444443
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.12 Score=49.22 Aligned_cols=219 Identities=12% Similarity=0.101 Sum_probs=112.0
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|+||+|.| |+....+.. ..+.-|-+|-++|+.+.+.-.
T Consensus 40 ~nptyl~~~~~~~~L-Y~v~~~~~~------------------------------ggvaay~iD~~~G~Lt~ln~~---- 84 (346)
T COG2706 40 GNPTYLAVNPDQRHL-YVVNEPGEE------------------------------GGVAAYRIDPDDGRLTFLNRQ---- 84 (346)
T ss_pred CCCceEEECCCCCEE-EEEEecCCc------------------------------CcEEEEEEcCCCCeEEEeecc----
Confidence 445678899999988 544332110 012335556566777766543
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE---EEeecCCeeec--cCCcccCCCCCccCCCe
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI---LVEELDSWVNL--HDCFTPLDKGVTKYSGG 177 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l---~~~~~~~w~~~--~~~~~~~~~~~~~~~d~ 177 (571)
......-+-++.++||++++.. +-..+...++.++.+ |....+ ..+...+=.+. .+.-... ..+|++
T Consensus 85 --~~~g~~p~yvsvd~~g~~vf~A-nY~~g~v~v~p~~~d-G~l~~~v~~~~h~g~~p~~rQ~~~h~H~a----~~tP~~ 156 (346)
T COG2706 85 --TLPGSPPCYVSVDEDGRFVFVA-NYHSGSVSVYPLQAD-GSLQPVVQVVKHTGSGPHERQESPHVHSA----NFTPDG 156 (346)
T ss_pred --ccCCCCCeEEEECCCCCEEEEE-EccCceEEEEEcccC-CccccceeeeecCCCCCCccccCCcccee----eeCCCC
Confidence 1112222557899999765554 444345456666555 554333 22222110000 0000000 124666
Q ss_pred -EEEEEecCCccEEEEEeCCCceeeceeecCe----EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCC-C-
Q 008274 178 -FIWASEKTGFRHLYLHDINGTCLGPITEGDW----MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHT-L- 250 (571)
Q Consensus 178 -~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~----~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~-~- 250 (571)
+++. .+-|...|++++++.+..+..+.... --+.+. |.|+++..|.+....+. ..+|..+-. .|.-. +
T Consensus 157 ~~l~v-~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~-FHpn~k~aY~v~EL~st--V~v~~y~~~-~g~~~~lQ 231 (346)
T COG2706 157 RYLVV-PDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIV-FHPNGKYAYLVNELNST--VDVLEYNPA-VGKFEELQ 231 (346)
T ss_pred CEEEE-eecCCceEEEEEcccCccccccccccCCCCCcceEE-EcCCCcEEEEEeccCCE--EEEEEEcCC-CceEEEee
Confidence 5554 55577788888887766554443211 113344 99999999998876653 555555531 12100 0
Q ss_pred ---CCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 251 ---EAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 251 ---~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.-+...+...+.....+|+||+++.. ....-. .|.++..
T Consensus 232 ~i~tlP~dF~g~~~~aaIhis~dGrFLYa-sNRg~d--sI~~f~V 273 (346)
T COG2706 232 TIDTLPEDFTGTNWAAAIHISPDGRFLYA-SNRGHD--SIAVFSV 273 (346)
T ss_pred eeccCccccCCCCceeEEEECCCCCEEEE-ecCCCC--eEEEEEE
Confidence 01111222233445589999987654 333333 4554443
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0053 Score=65.83 Aligned_cols=109 Identities=16% Similarity=0.131 Sum_probs=62.5
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
..+.-+.++.||||+++++.....+ .|.+.|..+.+...+.+... ...++.+|+|-+ |+.....
T Consensus 127 ~H~~DV~Dv~Wsp~~~~lvS~s~Dn----sViiwn~~tF~~~~vl~~H~-----------s~VKGvs~DP~Gky~ASqsd 191 (942)
T KOG0973|consen 127 GHDSDVLDVNWSPDDSLLVSVSLDN----SVIIWNAKTFELLKVLRGHQ-----------SLVKGVSWDPIGKYFASQSD 191 (942)
T ss_pred cCCCccceeccCCCccEEEEecccc----eEEEEccccceeeeeeeccc-----------ccccceEECCccCeeeeecC
Confidence 4556677899999999888876544 48888999886544333211 112223556655 3333333
Q ss_pred CCccEEEEEeCCCceeeceeecCe------EEEEEEEEeecCcEEEEEEcCCC
Q 008274 185 TGFRHLYLHDINGTCLGPITEGDW------MVEQIVGVNEASGQVYFTGTLDG 231 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~~------~~~~~~~~s~dg~~l~~~~~~~~ 231 (571)
+.--.+|+.. +-+..+.+|...- .+..+ +|||||++|......++
T Consensus 192 Drtikvwrt~-dw~i~k~It~pf~~~~~~T~f~Rl-SWSPDG~~las~nA~n~ 242 (942)
T KOG0973|consen 192 DRTLKVWRTS-DWGIEKSITKPFEESPLTTFFLRL-SWSPDGHHLASPNAVNG 242 (942)
T ss_pred CceEEEEEcc-cceeeEeeccchhhCCCcceeeec-ccCCCcCeecchhhccC
Confidence 3444455532 2344455554321 12344 59999998887765444
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.012 Score=63.99 Aligned_cols=118 Identities=15% Similarity=0.079 Sum_probs=70.3
Q ss_pred ceeEEEEEccCCeEEEEEEeccCc-cEEEEEEECCCCc--eEEEEEee-cCCeeeccCCcccCCCCCccCCCeEEEEEec
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQT-KLKVLKFDIKTGQ--RKVILVEE-LDSWVNLHDCFTPLDKGVTKYSGGFIWASEK 184 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~-~~~i~~~d~~~g~--~~~l~~~~-~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~ 184 (571)
..+..+.|||||+++++..+...+ ..+|+++|+++|+ ...|.... ...|. .++++|++.+.+
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~~~~~w~--------------~D~~~~~y~~~~ 192 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWA--------------NDSWTFYYVRKH 192 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcceEEEEe--------------eCCCEEEEEEec
Confidence 456778999999998888776654 5589999999997 33332111 01121 134457777664
Q ss_pred CC---ccEEEEEeCCCc--eeeceeec---CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 185 TG---FRHLYLHDINGT--CLGPITEG---DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 185 ~g---~~~l~~~~~~~~--~~~~lT~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
.+ ..+||++++.++ +-+.|-.+ .+.+ ....+.|++++++.+......+..++..++
T Consensus 193 ~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~--~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~ 256 (686)
T PRK10115 193 PVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYV--SLHKTTSKHYVVIHLASATTSEVLLLDAEL 256 (686)
T ss_pred CCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEE--EEEEcCCCCEEEEEEECCccccEEEEECcC
Confidence 32 378999998877 33445432 1222 122455888888666655432344444333
|
|
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.013 Score=57.04 Aligned_cols=182 Identities=15% Similarity=0.126 Sum_probs=101.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
-+|.||+.+++...+....+. ....+..+.-|||+++|++.-+.+ .|+++-..|++.-.-.+.+.. +.
T Consensus 281 y~ysyDle~ak~~k~~~~~g~-----e~~~~e~FeVShd~~fia~~G~~G----~I~lLhakT~eli~s~KieG~--v~- 348 (514)
T KOG2055|consen 281 YLYSYDLETAKVTKLKPPYGV-----EEKSMERFEVSHDSNFIAIAGNNG----HIHLLHAKTKELITSFKIEGV--VS- 348 (514)
T ss_pred EEEEeeccccccccccCCCCc-----ccchhheeEecCCCCeEEEcccCc----eEEeehhhhhhhhheeeeccE--Ee-
Confidence 369999999988877543111 133566788999999888764333 599999999874322221111 00
Q ss_pred cCCcccCCCCCccCCC-eEEEEEecCCccEEEEEeCCCcee-eceee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 161 HDCFTPLDKGVTKYSG-GFIWASEKTGFRHLYLHDINGTCL-GPITE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d-~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
.|. ++.| ..++.+...| ++|.+++..... .+.+. |.-.-..+ +.|.+|.+ +.+++..| -.+|
T Consensus 349 --~~~-------fsSdsk~l~~~~~~G--eV~v~nl~~~~~~~rf~D~G~v~gts~-~~S~ng~y-lA~GS~~G--iVNI 413 (514)
T KOG2055|consen 349 --DFT-------FSSDSKELLASGGTG--EVYVWNLRQNSCLHRFVDDGSVHGTSL-CISLNGSY-LATGSDSG--IVNI 413 (514)
T ss_pred --eEE-------EecCCcEEEEEcCCc--eEEEEecCCcceEEEEeecCccceeee-eecCCCce-EEeccCcc--eEEE
Confidence 011 1233 3566665555 899999866543 33333 22222333 47888873 33444455 3889
Q ss_pred EEEEeCCCCCCCCCCCeEecC---C-CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTN---G-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~---~-~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
|..+-.-.+. .++.+.. . ....+..|++|+.. ..++|+. .+..+.+++++.-
T Consensus 414 Yd~~s~~~s~----~PkPik~~dNLtt~Itsl~Fn~d~qi-LAiaS~~-~knalrLVHvPS~ 469 (514)
T KOG2055|consen 414 YDGNSCFAST----NPKPIKTVDNLTTAITSLQFNHDAQI-LAIASRV-KKNALRLVHVPSC 469 (514)
T ss_pred eccchhhccC----CCCchhhhhhhheeeeeeeeCcchhh-hhhhhhc-cccceEEEeccce
Confidence 8754321121 2222221 1 23456689999864 4445553 4456666676443
|
|
| >KOG2139 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.021 Score=53.97 Aligned_cols=108 Identities=10% Similarity=0.074 Sum_probs=66.9
Q ss_pred ccCCCeEEEEEecCCccEEEEEeCCCceeecee-ecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCC
Q 008274 172 TKYSGGFIWASEKTGFRHLYLHDINGTCLGPIT-EGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTL 250 (571)
Q Consensus 172 ~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~ 250 (571)
.|.+|+-.+.+..-|-.+|.+.+.+.++..+|- .+--.+. ...|||||++|+..+-+.. ..|+.-. ....
T Consensus 202 qwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~s-lLkwSPdgd~lfaAt~dav---frlw~e~--q~wt--- 272 (445)
T KOG2139|consen 202 QWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFS-LLKWSPDGDVLFAATCDAV---FRLWQEN--QSWT--- 272 (445)
T ss_pred EEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCcee-eEEEcCCCCEEEEecccce---eeeehhc--ccce---
Confidence 466677555555556788889999888877776 3322233 3459999998877754332 3333211 1221
Q ss_pred CCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 251 EAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 251 ~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.++.+..........+||.|+++.|+++. .|.+|.+..
T Consensus 273 -~erw~lgsgrvqtacWspcGsfLLf~~sg---sp~lysl~f 310 (445)
T KOG2139|consen 273 -KERWILGSGRVQTACWSPCGSFLLFACSG---SPRLYSLTF 310 (445)
T ss_pred -ecceeccCCceeeeeecCCCCEEEEEEcC---CceEEEEee
Confidence 23333322223445899999999998876 358888776
|
|
| >KOG1274 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.05 Score=57.70 Aligned_cols=153 Identities=12% Similarity=0.162 Sum_probs=85.7
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecCCcc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFR 188 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~ 188 (571)
.....+++.+|+.+++-++.. .|-.++..++......+..+..-.. +..+|++ |+..+.-+|.
T Consensus 98 p~r~~~v~g~g~~iaagsdD~----~vK~~~~~D~s~~~~lrgh~apVl~-----------l~~~p~~~fLAvss~dG~- 161 (933)
T KOG1274|consen 98 PIRDLAVSGSGKMIAAGSDDT----AVKLLNLDDSSQEKVLRGHDAPVLQ-----------LSYDPKGNFLAVSSCDGK- 161 (933)
T ss_pred cceEEEEecCCcEEEeecCce----eEEEEeccccchheeecccCCceee-----------eeEcCCCCEEEEEecCce-
Confidence 445578999999888876443 4888888876554443322211000 0224444 7666666774
Q ss_pred EEEEEeCCCcee-eceee----cCeE---EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC-
Q 008274 189 HLYLHDINGTCL-GPITE----GDWM---VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG- 259 (571)
Q Consensus 189 ~l~~~~~~~~~~-~~lT~----~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~- 259 (571)
++.++++.+.. .-||. .++. ...-+.|+|+|..+.+...++. ..+|+.. ++. ....|...
T Consensus 162 -v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~---Vkvy~r~---~we----~~f~Lr~~~ 230 (933)
T KOG1274|consen 162 -VQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNT---VKVYSRK---GWE----LQFKLRDKL 230 (933)
T ss_pred -EEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCe---EEEEccC---Cce----eheeecccc
Confidence 55566555432 22332 1122 2234469999988888877654 5666543 222 11222211
Q ss_pred --CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 260 --KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 260 --~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
.+....+|||.|+|++.+... .+|.+.+..
T Consensus 231 ~ss~~~~~~wsPnG~YiAAs~~~----g~I~vWnv~ 262 (933)
T KOG1274|consen 231 SSSKFSDLQWSPNGKYIAASTLD----GQILVWNVD 262 (933)
T ss_pred cccceEEEEEcCCCcEEeeeccC----CcEEEEecc
Confidence 124455999999999876543 255555553
|
|
| >KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0073 Score=60.08 Aligned_cols=185 Identities=10% Similarity=0.066 Sum_probs=97.2
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeE-EEeecCCCC---------------------CCCCCcccccCCCCCCCCceEE
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRF-RIMHQGKSS---------------------VGSEAQEDHAYPFAGASNVKVR 81 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~-~~~~~~~~~---------------------~~~~~~~~~~y~~~g~~~~~~~ 81 (571)
...++.|||.+.-|||.+-.....|.. .+......+ .| =+...-|+.|.+.....+.
T Consensus 348 gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdy-LcvkvdR~tK~~~~g~f~n 426 (698)
T KOG2314|consen 348 GIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDY-LCVKVDRHTKSKVKGQFSN 426 (698)
T ss_pred cccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcE-EEEEEEeeccccccceEee
Confidence 356788999999999987555444322 211110000 00 1122233444443333445
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC-ccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ-TKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~-~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
|-++.+.....-...+ +....+..++|-|.|...+.+....+ +....|.+....+..+.+..-..... +
T Consensus 427 ~eIfrireKdIpve~v--------elke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~-N- 496 (698)
T KOG2314|consen 427 LEIFRIREKDIPVEVV--------ELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFA-N- 496 (698)
T ss_pred EEEEEeeccCCCceee--------ecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhccccc-c-
Confidence 5555555433211111 23456778999999986665544443 45567777765555544332211111 1
Q ss_pred cCCcccCCCCCccCCCe-EEEEEe-cCCccEEEEEeCCCceeeceeecC-eEEEEEEEEeecCcEEEEEEcC
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASE-KTGFRHLYLHDINGTCLGPITEGD-WMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~-~~g~~~l~~~~~~~~~~~~lT~~~-~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
- ..|+|.| |+.+.. .+....|+.+|.+-...++..... +..... .|+|.|+++...++.
T Consensus 497 -----~----vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~v-eWDPtGRYvvT~ss~ 558 (698)
T KOG2314|consen 497 -----T----VFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAATEV-EWDPTGRYVVTSSSS 558 (698)
T ss_pred -----e----EEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccccccccc-eECCCCCEEEEeeeh
Confidence 1 1345555 555432 233567888887654444444332 223344 599999998887763
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.1 Score=46.92 Aligned_cols=176 Identities=7% Similarity=0.059 Sum_probs=95.1
Q ss_pred EEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
++.+||+.+++..++ +++ ...+.+..+.|--||+.++.-++.. .-+|| |+..-.+.++.+...+
T Consensus 62 hvRlyD~~S~np~Pv~t~e-------~h~kNVtaVgF~~dgrWMyTgseDg--t~kIW--dlR~~~~qR~~~~~sp---- 126 (311)
T KOG0315|consen 62 HVRLYDLNSNNPNPVATFE-------GHTKNVTAVGFQCDGRWMYTGSEDG--TVKIW--DLRSLSCQRNYQHNSP---- 126 (311)
T ss_pred eeEEEEccCCCCCceeEEe-------ccCCceEEEEEeecCeEEEecCCCc--eEEEE--eccCcccchhccCCCC----
Confidence 577889998876444 332 2346788899999999766554333 33344 5555566666554322
Q ss_pred ccCCcccCCCCCccCCC-eEEEEEecCCccEEEEEeCCCc-eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSG-GFIWASEKTGFRHLYLHDINGT-CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d-~~~~~s~~~g~~~l~~~~~~~~-~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
+..- ...++ +=++.++++| +|+..|+... ...+|..++-.......+.+||+.+.-..++.. -.+
T Consensus 127 -------Vn~v-vlhpnQteLis~dqsg--~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~---cyv 193 (311)
T KOG0315|consen 127 -------VNTV-VLHPNQTELISGDQSG--NIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGN---CYV 193 (311)
T ss_pred -------cceE-EecCCcceEEeecCCC--cEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCcc---EEE
Confidence 1000 01222 3455677777 4555665443 345555544333333358999998877765544 344
Q ss_pred EEEEeCCCCCCCCCCCeEec---CCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 238 YCAKLYPDWNHTLEAPVKLT---NGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt---~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
+++-- .......+.++ ..++ ...+-+|||+|+++.. ++. . ..++.+.
T Consensus 194 W~l~~----~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~-ssd-k--tv~iwn~ 244 (311)
T KOG0315|consen 194 WRLLN----HQTASELEPVHKFQAHNGHILRCLLSPDVKYLATC-SSD-K--TVKIWNT 244 (311)
T ss_pred EEccC----CCccccceEhhheecccceEEEEEECCCCcEEEee-cCC-c--eEEEEec
Confidence 44322 11111233333 2233 2345899999988754 332 2 4555554
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.25 Score=48.81 Aligned_cols=185 Identities=11% Similarity=0.134 Sum_probs=87.9
Q ss_pred EEEEEECCC-CceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAG-GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|.+||+++ |+.+.+..- ........+.++|||+.++.... ......+|.++ ++|+.+.+.......
T Consensus 13 ~I~~~~~~~~g~l~~~~~~-------~~~~~~~~l~~spd~~~lyv~~~-~~~~i~~~~~~-~~g~l~~~~~~~~~~--- 80 (330)
T PRK11028 13 QIHVWNLNHEGALTLLQVV-------DVPGQVQPMVISPDKRHLYVGVR-PEFRVLSYRIA-DDGALTFAAESPLPG--- 80 (330)
T ss_pred CEEEEEECCCCceeeeeEE-------ecCCCCccEEECCCCCEEEEEEC-CCCcEEEEEEC-CCCceEEeeeecCCC---
Confidence 467778763 554433221 11223345789999996655433 22332334444 356544333221110
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCC--Cceeece--eecCeEEEEEEEEeecCcEEEEEEcCCCCce
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDIN--GTCLGPI--TEGDWMVEQIVGVNEASGQVYFTGTLDGPLE 234 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~--~~~~~~l--T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 234 (571)
. |.. ...++++ +++.+... ...|..++++ +...+.+ ..+....... .++|+|+++|+.....+
T Consensus 81 -~----p~~--i~~~~~g~~l~v~~~~-~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~-~~~p~g~~l~v~~~~~~--- 148 (330)
T PRK11028 81 -S----PTH--ISTDHQGRFLFSASYN-ANCVSVSPLDKDGIPVAPIQIIEGLEGCHSA-NIDPDNRTLWVPCLKED--- 148 (330)
T ss_pred -C----ceE--EEECCCCCEEEEEEcC-CCeEEEEEECCCCCCCCceeeccCCCcccEe-EeCCCCCEEEEeeCCCC---
Confidence 0 110 1234444 66655432 3445555543 2111111 1122223333 48999999988765444
Q ss_pred eEEEEEEeCCCCCCCC--CCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 235 SHLYCAKLYPDWNHTL--EAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 235 ~~l~~~~l~~~g~~~~--~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
.|+.+++...+.... .....+..+.+-....++|||++++...... ..+.++++.
T Consensus 149 -~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~---~~v~v~~~~ 205 (330)
T PRK11028 149 -RIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELN---SSVDVWQLK 205 (330)
T ss_pred -EEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCC---CEEEEEEEe
Confidence 355555532232100 0111223344455679999998765543322 367777764
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00068 Score=42.89 Aligned_cols=32 Identities=9% Similarity=0.075 Sum_probs=23.8
Q ss_pred CCceeEEEEEccCCeEEEEEEecc-CccEEEEE
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRS-QTKLKVLK 138 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~-~~~~~i~~ 138 (571)
.......++|||||+.|+|++++. .+..+||+
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 455677899999999999999887 34556764
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.023 Score=53.47 Aligned_cols=149 Identities=13% Similarity=0.091 Sum_probs=83.7
Q ss_pred EEEEcc-CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEE
Q 008274 113 RVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLY 191 (571)
Q Consensus 113 ~~~wsp-Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~ 191 (571)
.|.|.+ +|. ++++.-.. ..|+++|.++++.+.+......+.. ...+++-+++++..+ +.
T Consensus 4 gp~~d~~~g~-l~~~D~~~---~~i~~~~~~~~~~~~~~~~~~~G~~-------------~~~~~g~l~v~~~~~---~~ 63 (246)
T PF08450_consen 4 GPVWDPRDGR-LYWVDIPG---GRIYRVDPDTGEVEVIDLPGPNGMA-------------FDRPDGRLYVADSGG---IA 63 (246)
T ss_dssp EEEEETTTTE-EEEEETTT---TEEEEEETTTTEEEEEESSSEEEEE-------------EECTTSEEEEEETTC---EE
T ss_pred ceEEECCCCE-EEEEEcCC---CEEEEEECCCCeEEEEecCCCceEE-------------EEccCCEEEEEEcCc---eE
Confidence 589998 554 44443222 2599999999987654322111110 011334444445544 45
Q ss_pred EEeCCCceeeceeec-----C-eEEEEEEEEeecCcEEEEEEcCCCCc--e--eEEEEEEeCCCCCCCCCCCeEec-CCC
Q 008274 192 LHDINGTCLGPITEG-----D-WMVEQIVGVNEASGQVYFTGTLDGPL--E--SHLYCAKLYPDWNHTLEAPVKLT-NGK 260 (571)
Q Consensus 192 ~~~~~~~~~~~lT~~-----~-~~~~~~~~~s~dg~~l~~~~~~~~~~--~--~~l~~~~l~~~g~~~~~~~~~lt-~~~ 260 (571)
++++.+++.+.+... . ....+. .++++|+ |||+....... . -.||+++. ++ +...+. ...
T Consensus 64 ~~d~~~g~~~~~~~~~~~~~~~~~~ND~-~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~--~~-----~~~~~~~~~~ 134 (246)
T PF08450_consen 64 VVDPDTGKVTVLADLPDGGVPFNRPNDV-AVDPDGN-LYVTDSGGGGASGIDPGSVYRIDP--DG-----KVTVVADGLG 134 (246)
T ss_dssp EEETTTTEEEEEEEEETTCSCTEEEEEE-EE-TTS--EEEEEECCBCTTCGGSEEEEEEET--TS-----EEEEEEEEES
T ss_pred EEecCCCcEEEEeeccCCCcccCCCceE-EEcCCCC-EEEEecCCCccccccccceEEECC--CC-----eEEEEecCcc
Confidence 558888877666442 2 233444 4899987 88877643211 1 57999997 43 223332 222
Q ss_pred ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 261 GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 261 g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
..+...++||++.+++.-+. -..|+.+++.
T Consensus 135 ~pNGi~~s~dg~~lyv~ds~---~~~i~~~~~~ 164 (246)
T PF08450_consen 135 FPNGIAFSPDGKTLYVADSF---NGRIWRFDLD 164 (246)
T ss_dssp SEEEEEEETTSSEEEEEETT---TTEEEEEEEE
T ss_pred cccceEECCcchheeecccc---cceeEEEecc
Confidence 34556899999977654333 2368888874
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.026 Score=52.35 Aligned_cols=125 Identities=14% Similarity=0.111 Sum_probs=68.9
Q ss_pred EEEEEECCC---CceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCC
Q 008274 81 RLGVVSAAG---GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDS 156 (571)
Q Consensus 81 ~l~~~dl~~---~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~ 156 (571)
.|.+||+.. |.-+...+. .+.......+.||||||.|+..++.+ .++++|+-+|+...-.... ...
T Consensus 163 ~IkLyD~Rs~dkgPF~tf~i~------~~~~~ew~~l~FS~dGK~iLlsT~~s----~~~~lDAf~G~~~~tfs~~~~~~ 232 (311)
T KOG1446|consen 163 LIKLYDLRSFDKGPFTTFSIT------DNDEAEWTDLEFSPDGKSILLSTNAS----FIYLLDAFDGTVKSTFSGYPNAG 232 (311)
T ss_pred eEEEEEecccCCCCceeEccC------CCCccceeeeEEcCCCCEEEEEeCCC----cEEEEEccCCcEeeeEeeccCCC
Confidence 466677663 333333332 12344567789999999888877655 4999999999854322222 111
Q ss_pred eeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecC-eEEEEEEEEeecCcEEEEEEc
Q 008274 157 WVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGD-WMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~-~~~~~~~~~s~dg~~l~~~~~ 228 (571)
-..... ..+||+ |++.+..+|.-|+|.+ ++++....+.+. -.......|.| ++..|.+.
T Consensus 233 ~~~~~a---------~ftPds~Fvl~gs~dg~i~vw~~--~tg~~v~~~~~~~~~~~~~~~fnP--~~~mf~sa 293 (311)
T KOG1446|consen 233 NLPLSA---------TFTPDSKFVLSGSDDGTIHVWNL--ETGKKVAVLRGPNGGPVSCVRFNP--RYAMFVSA 293 (311)
T ss_pred CcceeE---------EECCCCcEEEEecCCCcEEEEEc--CCCcEeeEecCCCCCCccccccCC--ceeeeeec
Confidence 111111 234665 7777777887777766 455544444442 11222334555 44444443
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.015 Score=56.07 Aligned_cols=130 Identities=17% Similarity=0.178 Sum_probs=72.0
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC--Cce---E-EEEEee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT--GQR---K-VILVEE 153 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~--g~~---~-~l~~~~ 153 (571)
-.||.+|..++..+.+. +.-..-..++|||||+.+.++.... ..|++++.+. |.. + .+....
T Consensus 143 G~lyr~~p~g~~~~l~~---------~~~~~~NGla~SpDg~tly~aDT~~---~~i~r~~~d~~~g~~~~~~~~~~~~~ 210 (307)
T COG3386 143 GSLYRVDPDGGVVRLLD---------DDLTIPNGLAFSPDGKTLYVADTPA---NRIHRYDLDPATGPIGGRRGFVDFDE 210 (307)
T ss_pred ceEEEEcCCCCEEEeec---------CcEEecCceEECCCCCEEEEEeCCC---CeEEEEecCcccCccCCcceEEEccC
Confidence 46888887555444331 1122345689999999766664433 2478887752 221 1 111100
Q ss_pred cCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCC
Q 008274 154 LDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDG 231 (571)
Q Consensus 154 ~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~ 231 (571)
+. ..+.+...+.++-+|.+-..+-..|-++++++.....+.-....+..+..-.++.+.||+++...+
T Consensus 211 ~~----------G~PDG~~vDadG~lw~~a~~~g~~v~~~~pdG~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~~ 278 (307)
T COG3386 211 EP----------GLPDGMAVDADGNLWVAAVWGGGRVVRFNPDGKLLGEIKLPVKRPTNPAFGGPDLNTLYITSARSG 278 (307)
T ss_pred CC----------CCCCceEEeCCCCEEEecccCCceEEEECCCCcEEEEEECCCCCCccceEeCCCcCEEEEEecCCC
Confidence 11 111111234556555433322246888888877666666553344555545778899999998763
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.12 Score=49.87 Aligned_cols=156 Identities=13% Similarity=0.124 Sum_probs=85.6
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
..+++.|-|+.+.|.|+=.. + ..++.+|.++|+.+.....
T Consensus 26 ~gEgP~w~~~~~~L~w~DI~--~---------------------------------~~i~r~~~~~g~~~~~~~p----- 65 (307)
T COG3386 26 LGEGPVWDPDRGALLWVDIL--G---------------------------------GRIHRLDPETGKKRVFPSP----- 65 (307)
T ss_pred cccCccCcCCCCEEEEEeCC--C---------------------------------CeEEEecCCcCceEEEECC-----
Confidence 45778898898888663211 1 1467788887766655432
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWA 181 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~ 181 (571)
........--++..|+.+ .+. +++++.+++.. +.++....+. +.-++.+.. -++++ |+|.
T Consensus 66 -----~~~~~~~~~d~~g~Lv~~-~~g-----~~~~~~~~~~~~t~~~~~~~~~-----~~~r~ND~~--v~pdG~~wfg 127 (307)
T COG3386 66 -----GGFSSGALIDAGGRLIAC-EHG-----VRLLDPDTGGKITLLAEPEDGL-----PLNRPNDGV--VDPDGRIWFG 127 (307)
T ss_pred -----CCcccceeecCCCeEEEE-ccc-----cEEEeccCCceeEEeccccCCC-----CcCCCCcee--EcCCCCEEEe
Confidence 122333333333333333 333 67788787777 4443322220 001111111 13444 5554
Q ss_pred Eec---------CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 182 SEK---------TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 182 s~~---------~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
.-. .....||++++.++..+.+.. ...+..-..||||++.+|++=+.. ..|+++++
T Consensus 128 t~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~-~~~~~NGla~SpDg~tly~aDT~~----~~i~r~~~ 192 (307)
T COG3386 128 DMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDD-DLTIPNGLAFSPDGKTLYVADTPA----NRIHRYDL 192 (307)
T ss_pred CCCccccCccccCCcceEEEEcCCCCEEEeecC-cEEecCceEECCCCCEEEEEeCCC----CeEEEEec
Confidence 222 113479999986666555554 344443345999999999986644 45777776
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.012 Score=53.53 Aligned_cols=185 Identities=17% Similarity=0.057 Sum_probs=98.8
Q ss_pred EEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCC
Q 008274 334 GALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRID 413 (571)
Q Consensus 334 ~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~ 413 (571)
.|+..|+. +. .||.+-||....... .-.|+.+.+.|+++||+|++.-|.-+-.... -....
T Consensus 8 ~wvl~P~~------P~-gvihFiGGaf~ga~P---~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~-~A~~~-------- 68 (250)
T PF07082_consen 8 SWVLIPPR------PK-GVIHFIGGAFVGAAP---QITYRYLLERLADRGYAVIATPYVVTFDHQA-IAREV-------- 68 (250)
T ss_pred cEEEeCCC------CC-EEEEEcCcceeccCc---HHHHHHHHHHHHhCCcEEEEEecCCCCcHHH-HHHHH--------
Confidence 46667753 33 455555665443322 2246777899999999999998863211110 01111
Q ss_pred chhHHHHHHHHHHcCCCcC--CcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc---------ccchhhhhhc
Q 008274 414 AEDQLTGAEWLIKQGLAKV--GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG---------YDTFYTEKYM 482 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~--~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~---------~~~~~~~~~~ 482 (571)
...+..+++.+.++...+. -++.=+|||+|+-+-+.+.+.++..-++-++++ +-+... ........+.
T Consensus 69 ~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS-FNN~~a~~aIP~~~~l~~~l~~EF~ 147 (250)
T PF07082_consen 69 WERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS-FNNFPADEAIPLLEQLAPALRLEFT 147 (250)
T ss_pred HHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEe-cCChHHHhhCchHhhhccccccCcc
Confidence 2345566666766543332 267779999999999988876543212222221 111100 0000011111
Q ss_pred CCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC-CCeeEEEcCCCCCC
Q 008274 483 GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR-KPYEILIFPDERHM 549 (571)
Q Consensus 483 g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~ 549 (571)
..|.+....... .-.....|+|.-.+|.. .++..+.+.|+++. ..++.+..|| .|.
T Consensus 148 PsP~ET~~li~~-------~Y~~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HL 204 (250)
T PF07082_consen 148 PSPEETRRLIRE-------SYQVRRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHL 204 (250)
T ss_pred CCHHHHHHHHHH-------hcCCccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCC
Confidence 122211111110 01124678888888876 47888888888764 3456667775 886
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.28 Score=46.61 Aligned_cols=191 Identities=11% Similarity=0.010 Sum_probs=101.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEec-cCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNR-SQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r-~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
-++++|..+|+....-.. .+..+++....|||||++++..-++ ....-.|-++|++ ...+++-+-+..+--+
T Consensus 29 ~~~v~D~~~g~~~~~~~a------~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~-~~~~ri~E~~s~GIGP 101 (305)
T PF07433_consen 29 FALVFDCRTGQLLQRLWA------PPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA-RGYRRIGEFPSHGIGP 101 (305)
T ss_pred EEEEEEcCCCceeeEEcC------CCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc-CCcEEEeEecCCCcCh
Confidence 468899999887654332 3456678889999999976665444 3356689999999 3344454433222111
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEec-------CC---------ccEEEEEeCCCce-eec--eee--cCeEEEEEEEEe
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEK-------TG---------FRHLYLHDINGTC-LGP--ITE--GDWMVEQIVGVN 217 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~-------~g---------~~~l~~~~~~~~~-~~~--lT~--~~~~~~~~~~~s 217 (571)
..- .+.+|+ -+++.+- .| -..|-++|..+++ ..+ |.. ...++.... ++
T Consensus 102 Hel---------~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa-~~ 171 (305)
T PF07433_consen 102 HEL---------LLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLA-VD 171 (305)
T ss_pred hhE---------EEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEE-ec
Confidence 111 123444 3333221 12 2677777766665 344 322 233455554 88
Q ss_pred ecCcEEEEEEcCCCCce--eEEEEEEeCCCCCCCCCCCeEecCC-------Cc-eEEEEECCCCCEEEEEeeCCCCCCEE
Q 008274 218 EASGQVYFTGTLDGPLE--SHLYCAKLYPDWNHTLEAPVKLTNG-------KG-KHVAVLDHNMRNFVDFHDSLDSPPRI 287 (571)
Q Consensus 218 ~dg~~l~~~~~~~~~~~--~~l~~~~l~~~g~~~~~~~~~lt~~-------~g-~~~~~~s~~g~~~v~~~s~~~~p~~l 287 (571)
.+|..++-...+..+.+ --|+.... +. ..+.+... .+ ..++.++.+|..++.++- .-..+
T Consensus 172 ~~G~V~~a~Q~qg~~~~~~PLva~~~~---g~----~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsP---rGg~~ 241 (305)
T PF07433_consen 172 GDGTVAFAMQYQGDPGDAPPLVALHRR---GG----ALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSP---RGGRV 241 (305)
T ss_pred CCCcEEEEEecCCCCCccCCeEEEEcC---CC----cceeccCChHHHHhhCCceEEEEEeCCCCEEEEECC---CCCEE
Confidence 88754444433322221 22333222 21 12222211 23 245688899988776542 23467
Q ss_pred EEEEcCCCcee
Q 008274 288 LLCSLQDGSLV 298 (571)
Q Consensus 288 ~~~~~~~~~~~ 298 (571)
.+++..+++-+
T Consensus 242 ~~~d~~tg~~~ 252 (305)
T PF07433_consen 242 AVWDAATGRLL 252 (305)
T ss_pred EEEECCCCCEe
Confidence 77787777643
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.16 Score=52.91 Aligned_cols=63 Identities=14% Similarity=0.100 Sum_probs=48.4
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.+.+.+.++|||..+..-.- .+|.++|+...+.+.+.++
T Consensus 15 yr~Gnl~ft~dG~sviSPvG-------------------------------------Nrvsv~dLknN~S~Tl~~e---- 53 (893)
T KOG0291|consen 15 YRAGNLVFTKDGNSVISPVG-------------------------------------NRVSVFDLKNNKSYTLPLE---- 53 (893)
T ss_pred eecCcEEECCCCCEEEeccC-------------------------------------CEEEEEEccCCcceeEEee----
Confidence 45678899999998865211 2678999999888877664
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEecc
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRS 130 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~ 130 (571)
....+..++-||||.+++.+..++
T Consensus 54 ----~~~NI~~ialSp~g~lllavdE~g 77 (893)
T KOG0291|consen 54 ----TRYNITRIALSPDGTLLLAVDERG 77 (893)
T ss_pred ----cCCceEEEEeCCCceEEEEEcCCC
Confidence 567789999999999877776655
|
|
| >KOG2096 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.051 Score=50.57 Aligned_cols=157 Identities=15% Similarity=0.089 Sum_probs=76.0
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCC-CceEEEEEeecC-CeeeccCCcccCCCCCccCCCeEEEEEecCCc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT-GQRKVILVEELD-SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGF 187 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~-g~~~~l~~~~~~-~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~ 187 (571)
.-..+.|+||-+.++++..++ +...+|.++-.+ |.-..-....++ .+...+... -... ...+++-+++|-.. -
T Consensus 134 hpT~V~FapDc~s~vv~~~~g-~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~-~i~i--GiA~~~k~imsas~-d 208 (420)
T KOG2096|consen 134 HPTRVVFAPDCKSVVVSVKRG-NKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVD-IINI--GIAGNAKYIMSASL-D 208 (420)
T ss_pred CceEEEECCCcceEEEEEccC-CEEEEEEeeecccCCCCcccccccccccchhcccc-eEEE--eecCCceEEEEecC-C
Confidence 456689999999888887765 343455444332 211100000000 000000000 0000 01122223333222 3
Q ss_pred cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC----ceE
Q 008274 188 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK----GKH 263 (571)
Q Consensus 188 ~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~----g~~ 263 (571)
..|.++++.|....-+.......... .+||+|+.|...+-..+ ..+|.+-...+|. .....++-... +..
T Consensus 209 t~i~lw~lkGq~L~~idtnq~~n~~a-avSP~GRFia~~gFTpD---VkVwE~~f~kdG~--fqev~rvf~LkGH~saV~ 282 (420)
T KOG2096|consen 209 TKICLWDLKGQLLQSIDTNQSSNYDA-AVSPDGRFIAVSGFTPD---VKVWEPIFTKDGT--FQEVKRVFSLKGHQSAVL 282 (420)
T ss_pred CcEEEEecCCceeeeeccccccccce-eeCCCCcEEEEecCCCC---ceEEEEEeccCcc--hhhhhhhheeccchhhee
Confidence 45888888876555554333333344 48999998888775444 5566555523442 22333333222 345
Q ss_pred EEEECCCCCEEEEE
Q 008274 264 VAVLDHNMRNFVDF 277 (571)
Q Consensus 264 ~~~~s~~g~~~v~~ 277 (571)
...||++++.++-+
T Consensus 283 ~~aFsn~S~r~vtv 296 (420)
T KOG2096|consen 283 AAAFSNSSTRAVTV 296 (420)
T ss_pred eeeeCCCcceeEEE
Confidence 56888888776554
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0036 Score=64.22 Aligned_cols=142 Identities=13% Similarity=0.072 Sum_probs=76.0
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccccc---c-c--------chhhhHHHHhCCcEEEEEC
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWI---N-T--------VDMRAQYLRSKGILVWKLD 390 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~-~--------~~~~~~~l~~~G~~v~~~d 390 (571)
.+....+..+..|.+...+ .++..|+||++.|||+.+.....|. + . .......+. +-..++.+|
T Consensus 17 ~~~~~~~~~lfyw~~~s~~---~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~-~~an~l~iD 92 (415)
T PF00450_consen 17 PVNDNENAHLFYWFFESRN---DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWN-KFANLLFID 92 (415)
T ss_dssp EECTTTTEEEEEEEEE-SS---GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GG-GTSEEEEE-
T ss_pred ecCCCCCcEEEEEEEEeCC---CCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccc-cccceEEEe
Confidence 3333356778888776654 2367799999999999865322111 0 0 000011122 236788899
Q ss_pred CC-CCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhc----C------CCee
Q 008274 391 NR-GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLAR----F------PDVF 458 (571)
Q Consensus 391 ~r-G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~----~------~~~~ 458 (571)
.| |.|.|-...... ....-....+|+..+++.+..+ +.....++.|.|.||||..+-.++.. . +-.+
T Consensus 93 ~PvGtGfS~~~~~~~-~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 93 QPVGTGFSYGNDPSD-YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp -STTSTT-EESSGGG-GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred ecCceEEeecccccc-ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 65 666542211111 0000011245666666655443 55566799999999999987655532 2 2348
Q ss_pred EEEEEcCccCC
Q 008274 459 QCAVSGAPVTS 469 (571)
Q Consensus 459 ~~~v~~~~~~~ 469 (571)
++++.++|+++
T Consensus 172 kGi~IGng~~d 182 (415)
T PF00450_consen 172 KGIAIGNGWID 182 (415)
T ss_dssp EEEEEESE-SB
T ss_pred ccceecCcccc
Confidence 89999999876
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.019 Score=55.12 Aligned_cols=157 Identities=11% Similarity=0.036 Sum_probs=87.7
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCC--ceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTG--QRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g--~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
..-+-...||++||++|..+.... .-||.+..++- -.+++..+..+ .... .|+||. ++....-
T Consensus 224 tdEVWfl~FS~nGkyLAsaSkD~T--aiiw~v~~d~~~kl~~tlvgh~~~--------V~yi----~wSPDdryLlaCg~ 289 (519)
T KOG0293|consen 224 TDEVWFLQFSHNGKYLASASKDST--AIIWIVVYDVHFKLKKTLVGHSQP--------VSYI----MWSPDDRYLLACGF 289 (519)
T ss_pred CCcEEEEEEcCCCeeEeeccCCce--EEEEEEecCcceeeeeeeecccCc--------eEEE----EECCCCCeEEecCc
Confidence 344556799999999998876543 34566655543 11222221111 0011 356665 4333211
Q ss_pred CCccEEEEEeCCCceeeceee-c-CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec--CCC
Q 008274 185 TGFRHLYLHDINGTCLGPITE-G-DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT--NGK 260 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~-~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt--~~~ 260 (571)
+ .-+.+.|.+++..+.+-. + .+.+.+.. |-|||..++.-+. .++++-.++ +|.. ...-- ..+
T Consensus 290 ~--e~~~lwDv~tgd~~~~y~~~~~~S~~sc~-W~pDg~~~V~Gs~-----dr~i~~wdl--Dgn~----~~~W~gvr~~ 355 (519)
T KOG0293|consen 290 D--EVLSLWDVDTGDLRHLYPSGLGFSVSSCA-WCPDGFRFVTGSP-----DRTIIMWDL--DGNI----LGNWEGVRDP 355 (519)
T ss_pred h--HheeeccCCcchhhhhcccCcCCCcceeE-EccCCceeEecCC-----CCcEEEecC--Ccch----hhcccccccc
Confidence 1 127788888887655433 3 35566664 9999987544332 277888888 6641 11110 012
Q ss_pred ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 261 GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 261 g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
..+..++++||++++.++.. +.+.+++..+..
T Consensus 356 ~v~dlait~Dgk~vl~v~~d----~~i~l~~~e~~~ 387 (519)
T KOG0293|consen 356 KVHDLAITYDGKYVLLVTVD----KKIRLYNREARV 387 (519)
T ss_pred eeEEEEEcCCCcEEEEEecc----cceeeechhhhh
Confidence 35667899999999888743 366666654433
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.21 Score=45.08 Aligned_cols=179 Identities=11% Similarity=0.060 Sum_probs=92.2
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecCCeeec
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELDSWVNL 160 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~~w~~~ 160 (571)
+.+||+..-...++ ......+..+.--|...-++...+.. .|.+-|+.+..+.. |..+.+. .
T Consensus 107 ~kIWdlR~~~~qR~---------~~~~spVn~vvlhpnQteLis~dqsg----~irvWDl~~~~c~~~liPe~~~-~--- 169 (311)
T KOG0315|consen 107 VKIWDLRSLSCQRN---------YQHNSPVNTVVLHPNQTELISGDQSG----NIRVWDLGENSCTHELIPEDDT-S--- 169 (311)
T ss_pred EEEEeccCcccchh---------ccCCCCcceEEecCCcceEEeecCCC----cEEEEEccCCccccccCCCCCc-c---
Confidence 45677766332222 22334555667777766544433222 37777888765543 3222211 1
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCc----eeeceeec---CeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGT----CLGPITEG---DWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~----~~~~lT~~---~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
.+.+ .-.+|+ .+...+..| +.|..++-++ +.+++++- ......+. +|||+++|...+.+..
T Consensus 170 ---i~sl----~v~~dgsml~a~nnkG--~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~-lSPd~k~lat~ssdkt- 238 (311)
T KOG0315|consen 170 ---IQSL----TVMPDGSMLAAANNKG--NCYVWRLLNHQTASELEPVHKFQAHNGHILRCL-LSPDVKYLATCSSDKT- 238 (311)
T ss_pred ---eeeE----EEcCCCcEEEEecCCc--cEEEEEccCCCccccceEhhheecccceEEEEE-ECCCCcEEEeecCCce-
Confidence 1111 113444 554455555 3555543332 24455542 22334454 8999999988877653
Q ss_pred ceeEEEEEEeCCCCCCCCCCCeEecCCCce-EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 233 LESHLYCAKLYPDWNHTLEAPVKLTNGKGK-HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 233 ~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~-~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
..|+..+- . - .-..+|+..+++ -.+.||.||.|++- .++.. -+.++ ++..+++++.
T Consensus 239 --v~iwn~~~--~-~---kle~~l~gh~rWvWdc~FS~dg~YlvT-assd~-~~rlW--~~~~~k~v~q 295 (311)
T KOG0315|consen 239 --VKIWNTDD--F-F---KLELVLTGHQRWVWDCAFSADGEYLVT-ASSDH-TARLW--DLSAGKEVRQ 295 (311)
T ss_pred --EEEEecCC--c-e---eeEEEeecCCceEEeeeeccCccEEEe-cCCCC-ceeec--ccccCceeee
Confidence 56665442 1 0 124456655543 35699999987754 44432 22343 5556665543
|
|
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.048 Score=54.03 Aligned_cols=170 Identities=10% Similarity=-0.008 Sum_probs=79.1
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-CeeeccCCcccCCCCCccCCCe-EEEEEecCCccE
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRH 189 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~ 189 (571)
....|-|+.+-.++....+. ..+||-++-...+.+.|.....+ .=++ -..| .|++|+ ++.....+|--+
T Consensus 272 t~g~whP~~k~~FlT~s~Dg-tlRiWdv~~~k~q~qVik~k~~~g~Rv~----~tsC----~~nrdg~~iAagc~DGSIQ 342 (641)
T KOG0772|consen 272 TCGCWHPDNKEEFLTCSYDG-TLRIWDVNNTKSQLQVIKTKPAGGKRVP----VTSC----AWNRDGKLIAAGCLDGSIQ 342 (641)
T ss_pred eccccccCcccceEEecCCC-cEEEEecCCchhheeEEeeccCCCcccC----ceee----ecCCCcchhhhcccCCcee
Confidence 34579999885555444442 34566665544444443221111 0000 0111 355665 444445566555
Q ss_pred EEEEeCCCceeeceee----cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEE
Q 008274 190 LYLHDINGTCLGPITE----GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVA 265 (571)
Q Consensus 190 l~~~~~~~~~~~~lT~----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~ 265 (571)
+|-...-+..+...-+ +.-++..+ .||+||++|.-.+.++. ..+|-+.- -. ..+..-.-|...--...+
T Consensus 343 ~W~~~~~~v~p~~~vk~AH~~g~~Itsi-~FS~dg~~LlSRg~D~t---LKvWDLrq--~k-kpL~~~tgL~t~~~~tdc 415 (641)
T KOG0772|consen 343 IWDKGSRTVRPVMKVKDAHLPGQDITSI-SFSYDGNYLLSRGFDDT---LKVWDLRQ--FK-KPLNVRTGLPTPFPGTDC 415 (641)
T ss_pred eeecCCcccccceEeeeccCCCCceeEE-EeccccchhhhccCCCc---eeeeeccc--cc-cchhhhcCCCccCCCCcc
Confidence 6654211111111111 11134444 49999998876655443 44443321 11 011011111111112356
Q ss_pred EECCCCCEEEEEeeCC--CCCCEEEEEEcCCCce
Q 008274 266 VLDHNMRNFVDFHDSL--DSPPRILLCSLQDGSL 297 (571)
Q Consensus 266 ~~s~~g~~~v~~~s~~--~~p~~l~~~~~~~~~~ 297 (571)
.|||+.+.++.-.+.+ .+++.|+.++..+-..
T Consensus 416 ~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~ 449 (641)
T KOG0772|consen 416 CFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDT 449 (641)
T ss_pred ccCCCceEEEecccccCCCCCceEEEEeccceee
Confidence 8999987655444433 4556788877654443
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.23 Score=47.74 Aligned_cols=118 Identities=15% Similarity=0.272 Sum_probs=67.9
Q ss_pred CCeEEEEEecCCccEEEEEeCCCceee------ceee----cCeEEE--EEEEEeecCcEEEEEEcC------CCCceeE
Q 008274 175 SGGFIWASEKTGFRHLYLHDINGTCLG------PITE----GDWMVE--QIVGVNEASGQVYFTGTL------DGPLESH 236 (571)
Q Consensus 175 ~d~~~~~s~~~g~~~l~~~~~~~~~~~------~lT~----~~~~~~--~~~~~s~dg~~l~~~~~~------~~~~~~~ 236 (571)
.+.++|.|-. .++|..++.+...+ .+|. ..|... +...+++..+.||+.... +.| -..
T Consensus 195 ~~~~~F~Sy~---G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdp-gte 270 (342)
T PF06433_consen 195 GGRLYFVSYE---GNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDP-GTE 270 (342)
T ss_dssp TTEEEEEBTT---SEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS--EEE
T ss_pred CCeEEEEecC---CEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCC-ceE
Confidence 3457776533 36788887665432 2231 244432 234577888899988763 122 588
Q ss_pred EEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
||.+|+. ..+ ...++.-.....+..+|.|.+=++|..+... ..|+++|..+|+.++.+..
T Consensus 271 VWv~D~~--t~k---rv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~--~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 271 VWVYDLK--THK---RVARIPLEHPIDSIAVSQDDKPLLYALSAGD--GTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEEETT--TTE---EEEEEEEEEEESEEEEESSSS-EEEEEETTT--TEEEEEETTT--EEEEE--
T ss_pred EEEEECC--CCe---EEEEEeCCCccceEEEccCCCcEEEEEcCCC--CeEEEEeCcCCcEEeehhc
Confidence 9999983 321 4455543222335678888887777655432 4899999999988776543
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0012 Score=64.91 Aligned_cols=127 Identities=20% Similarity=0.252 Sum_probs=80.1
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhh---hHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLK---FEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~---~~~~~~~ 407 (571)
|..-+|.|.- .+.+.-|+|+++||+.-... .+.. -|+ .+.|+. ...+|+.++||-. ..|-- .....++
T Consensus 121 LYlNVW~P~~---~p~n~tVlVWiyGGGF~sGt-~SLd-vYd--Gk~la~~envIvVs~NYRvG-~FGFL~l~~~~eaPG 192 (601)
T KOG4389|consen 121 LYLNVWAPAA---DPYNLTVLVWIYGGGFYSGT-PSLD-VYD--GKFLAAVENVIVVSMNYRVG-AFGFLYLPGHPEAPG 192 (601)
T ss_pred eEEEEeccCC---CCCCceEEEEEEcCccccCC-ccee-eec--cceeeeeccEEEEEeeeeec-cceEEecCCCCCCCC
Confidence 6666788841 11345599999998654331 1111 111 455654 5678999999932 12211 1222333
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCC--CeeEEEEEcCccCC
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFP--DVFQCAVSGAPVTS 469 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~--~~~~~~v~~~~~~~ 469 (571)
++ .+-|..-|++|+.+. ..-|+++|.++|.|+|+.-+.+-+..-+ .+|+-+|+.+|-.+
T Consensus 193 Nm---Gl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 193 NM---GLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred cc---chHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 43 478899999999886 3358999999999999987765554322 36888888776554
|
|
| >KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.14 Score=51.38 Aligned_cols=234 Identities=15% Similarity=0.084 Sum_probs=114.6
Q ss_pred cCCCceEEECCCCCeEEEEEEeCC---CCCeEEEeec-----CCCC--CCCCCcccccCCCCCCCCceEEEEEEECCCCc
Q 008274 22 MDRKTGYWWSLDSKFIAFTQVDSS---EIPRFRIMHQ-----GKSS--VGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP 91 (571)
Q Consensus 22 ~~~~~~~~wSPDg~~iay~~~~~~---~~~~~~~~~~-----~~~~--~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~ 91 (571)
+....-+.||-|+|++|-+..+.- ..+.+...+. .+.. .+.|...-+.|=.+-+.|....+.++.+-+++
T Consensus 305 ~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~ 384 (698)
T KOG2314|consen 305 YLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKR 384 (698)
T ss_pred ccccceEEeccCCceeEEeccceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccc
Confidence 344566789999999998664321 1122222110 0000 02233333444444444444445555555544
Q ss_pred eEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCc--------cEEEEEEECCCCceEEEEEeecCCeeeccCC
Q 008274 92 VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQT--------KLKVLKFDIKTGQRKVILVEELDSWVNLHDC 163 (571)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~--------~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~ 163 (571)
..+.. .-..-..+..-|-..|++|++-..|... +.+||+++-+.=....+- ..+ +.
T Consensus 385 ~iRt~--------nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~ve-lke-------~v 448 (698)
T KOG2314|consen 385 EIRTK--------NLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVE-LKE-------SV 448 (698)
T ss_pred eeeec--------cceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeee-cch-------he
Confidence 32210 0123345667899999988877666431 446777766543332221 111 11
Q ss_pred cccCCCCCccCCCeEEEEEecCCc--cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE
Q 008274 164 FTPLDKGVTKYSGGFIWASEKTGF--RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 164 ~~~~~~~~~~~~d~~~~~s~~~g~--~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 241 (571)
+.+.+. ..+|+|..++-.+-- -..|.+...+++++.+-.-+-....-+.|+|.|+.++..+-... ...|+-++
T Consensus 449 i~FaWE---P~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~--~g~l~F~D 523 (698)
T KOG2314|consen 449 IAFAWE---PHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSR--RGDLEFYD 523 (698)
T ss_pred eeeeec---cCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEeccc--ccceEEEe
Confidence 122110 134557777655433 33455554455544443322222223359999998888775432 24455555
Q ss_pred eCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeC
Q 008274 242 LYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 242 l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~ 280 (571)
. +-.. .+......-.+.....+.|.|+|++...++
T Consensus 524 ~--~~a~--~k~~~~~eh~~at~veWDPtGRYvvT~ss~ 558 (698)
T KOG2314|consen 524 T--DYAD--LKDTASPEHFAATEVEWDPTGRYVVTSSSS 558 (698)
T ss_pred c--chhh--hhhccCccccccccceECCCCCEEEEeeeh
Confidence 5 2110 011111111233455899999988765544
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.28 Score=48.16 Aligned_cols=114 Identities=15% Similarity=0.244 Sum_probs=60.7
Q ss_pred EEEEcc-CCeEEEEEEeccCccEEEEEEECCCCceEEEEE------e-ecCCeeeccCCcccCCCCCccCCCe--EEEEE
Q 008274 113 RVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV------E-ELDSWVNLHDCFTPLDKGVTKYSGG--FIWAS 182 (571)
Q Consensus 113 ~~~wsp-Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~------~-~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s 182 (571)
.|.+++ ||+.++.... ..|+.+|+.+.+...+.. . ...+|.+.+ ++++ ..++++ +++.+
T Consensus 198 rP~~~~~dg~~~~vs~e-----G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g--~q~i----a~~~dg~~lyV~~ 266 (352)
T TIGR02658 198 HPAYSNKSGRLVWPTYT-----GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGG--WQQV----AYHRARDRIYLLA 266 (352)
T ss_pred CCceEcCCCcEEEEecC-----CeEEEEecCCCcceecceeeeccccccccccCCCc--ceeE----EEcCCCCEEEEEe
Confidence 344566 8865554433 249999976655433211 1 112454332 1111 233343 44434
Q ss_pred ec-------CCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 183 EK-------TGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 183 ~~-------~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
.. .+-.+|+.+|..+++. ..+.-+. ....+. +|+|++.++|.++... ..|..+|+
T Consensus 267 ~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~-~~~~ia-vS~Dgkp~lyvtn~~s---~~VsViD~ 329 (352)
T TIGR02658 267 DQRAKWTHKTASRFLFVVDAKTGKRLRKIELGH-EIDSIN-VSQDAKPLLYALSTGD---KTLYIFDA 329 (352)
T ss_pred cCCccccccCCCCEEEEEECCCCeEEEEEeCCC-ceeeEE-ECCCCCeEEEEeCCCC---CcEEEEEC
Confidence 32 2347999999887764 4444444 445554 9999995555555433 23556665
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.11 Score=53.94 Aligned_cols=54 Identities=13% Similarity=0.212 Sum_probs=38.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR 146 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~ 146 (571)
.|.+||+.+++.... + ......+..+.|+|||+.++...... .|.+.|+.+++.
T Consensus 149 tVrIWDl~tg~~~~~-l-------~~h~~~V~sla~spdG~lLatgs~Dg----~IrIwD~rsg~~ 202 (493)
T PTZ00421 149 VVNVWDVERGKAVEV-I-------KCHSDQITSLEWNLDGSLLCTTSKDK----KLNIIDPRDGTI 202 (493)
T ss_pred EEEEEECCCCeEEEE-E-------cCCCCceEEEEEECCCCEEEEecCCC----EEEEEECCCCcE
Confidence 478899998865432 2 12345688899999999777654332 388889998875
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.36 Score=45.50 Aligned_cols=173 Identities=13% Similarity=0.029 Sum_probs=90.2
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCC-c
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG-F 187 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g-~ 187 (571)
.....+++|+||+.++++. .......|+.....+.....+ .. . ..-.| +|++++.+|...+.. -
T Consensus 24 ~~~~s~AvS~dg~~~A~v~-~~~~~~~L~~~~~~~~~~~~~-~g--~------~l~~P-----S~d~~g~~W~v~~~~~~ 88 (253)
T PF10647_consen 24 YDVTSPAVSPDGSRVAAVS-EGDGGRSLYVGPAGGPVRPVL-TG--G------SLTRP-----SWDPDGWVWTVDDGSGG 88 (253)
T ss_pred ccccceEECCCCCeEEEEE-EcCCCCEEEEEcCCCcceeec-cC--C------ccccc-----cccCCCCEEEEEcCCCc
Confidence 3677899999999888887 222344688887665433333 11 0 00112 567777666655522 2
Q ss_pred cEEEEEeCCCcee--eceeecCe--EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCC-CCCCCCCeEecCC--C
Q 008274 188 RHLYLHDINGTCL--GPITEGDW--MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDW-NHTLEAPVKLTNG--K 260 (571)
Q Consensus 188 ~~l~~~~~~~~~~--~~lT~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g-~~~~~~~~~lt~~--~ 260 (571)
..+++ +...++. ..+.-... .+..+ .+|+||..+.+.....+.....+..+.-+.+| +..+..+.++... .
T Consensus 89 ~~~~~-~~~~g~~~~~~v~~~~~~~~I~~l-~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~ 166 (253)
T PF10647_consen 89 VRVVR-DSASGTGEPVEVDWPGLRGRITAL-RVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLS 166 (253)
T ss_pred eEEEE-ecCCCcceeEEecccccCCceEEE-EECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccC
Confidence 23333 2222222 22222211 45666 49999999999997665534445444442233 1122233333322 2
Q ss_pred ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 261 GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 261 g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
....+.|+++++.++.. .....+... .+.. +|.....+
T Consensus 167 ~v~~v~W~~~~~L~V~~-~~~~~~~~~-~v~~-dG~~~~~l 204 (253)
T PF10647_consen 167 DVTDVAWSDDSTLVVLG-RSAGGPVVR-LVSV-DGGPSTPL 204 (253)
T ss_pred cceeeeecCCCEEEEEe-CCCCCceeE-EEEc-cCCccccc
Confidence 23456889888655554 444444333 3343 44433444
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171 | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0055 Score=65.60 Aligned_cols=112 Identities=9% Similarity=0.121 Sum_probs=68.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC--ccEEEEEEECCCCceEEEEEeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ--TKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~--~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
.|.+.|.++...+.+.+. ....+..|.|||||+.++++..-.. ....||+.|+.+.....+--..+..-+
T Consensus 330 ~L~~~D~dG~n~~~ve~~--------~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aai 401 (912)
T TIGR02171 330 NLAYIDYTKGASRAVEIE--------DTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAI 401 (912)
T ss_pred eEEEEecCCCCceEEEec--------CCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccc
Confidence 789999999888877443 4556778999999999999555544 567899999997544322211122111
Q ss_pred eccCCcccCCCCCccCCCe-EEEEEecCC------c--cEEEEEeCCC---ceeeceeecCe
Q 008274 159 NLHDCFTPLDKGVTKYSGG-FIWASEKTG------F--RHLYLHDING---TCLGPITEGDW 208 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~-~~~~s~~~g------~--~~l~~~~~~~---~~~~~lT~~~~ 208 (571)
|+|+-.. ++|. |+++++-.. | ..-|.+.... |+++.|=.|.+
T Consensus 402 ---prwrv~e-----~gdt~ivyv~~a~nn~d~~~~~~~stw~v~f~~gkfg~p~kl~dga~ 455 (912)
T TIGR02171 402 ---PRWRVLE-----NGDTVIVYVSDASNNKDDATFAAYSTWQVPFANGKFGTPKKLFDGAY 455 (912)
T ss_pred ---cceEecC-----CCCeEEEEEcCCCCCcchhhhhhcceEEEEecCCCCCCchhhhcccc
Confidence 3344432 4566 666654311 2 3345555433 34566655554
|
This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown. |
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0022 Score=40.50 Aligned_cols=38 Identities=13% Similarity=0.104 Sum_probs=25.2
Q ss_pred eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 201 GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 201 ~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
+++|........+ .|||||++|+|++++.+....+||.
T Consensus 2 ~~~t~~~~~~~~p-~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 2 KQLTNSPGDDGSP-AWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp EEES-SSSSEEEE-EE-TTSSEEEEEEECT--SSEEEEE
T ss_pred cCcccCCccccCE-EEecCCCEEEEEecCCCCCCcCEEC
Confidence 4677665544555 4999999999999988333477774
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.029 Score=50.88 Aligned_cols=211 Identities=15% Similarity=0.097 Sum_probs=107.9
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC--hhhhHHHHhccC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR--GLKFEASIKHNC 409 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~--~~~~~~~~~~~~ 409 (571)
.+...+.|. |..|+-+++-|-+.... ..+ ..+..-+..+|++.+.+.-+-.|.+ ...+...+.-
T Consensus 102 A~~~~liPQ------K~~~KOG~~a~tgdh~y-----~rr-~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~-- 167 (371)
T KOG1551|consen 102 ARVAWLIPQ------KMADLCLSWALTGDHVY-----TRR-LVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEY-- 167 (371)
T ss_pred eeeeeeccc------CcCCeeEEEeecCCcee-----Eee-eeecCchhhhcchheeeecccccccCCHHHHHHHHHH--
Confidence 445556662 45577777765222211 112 1234566788888888876644332 2222211110
Q ss_pred CCCCchhHHHHHHHHHHc-----C---CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhh
Q 008274 410 GRIDAEDQLTGAEWLIKQ-----G---LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKY 481 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~-----~---~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 481 (571)
+.|+...-++++++ . ...-.+.+|.|-||||.+|..+...++.- |+..|+.++......+.+..
T Consensus 168 ----vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~P----va~~p~l~~~~asvs~teg~ 239 (371)
T KOG1551|consen 168 ----VTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKP----VATAPCLNSSKASVSATEGL 239 (371)
T ss_pred ----HHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCC----ccccccccccccchhhhhhh
Confidence 23332222222221 1 11236899999999999999998877654 34555555543222222111
Q ss_pred c-----------CCC------CCCh-hhhc--------------------cCCcchhhccCCCc-----EEEEecCCCCC
Q 008274 482 M-----------GLP------SEDP-VGYE--------------------YSSVMHHVHKMKGK-----LLLVHGMIDEN 518 (571)
Q Consensus 482 ~-----------g~~------~~~~-~~~~--------------------~~s~~~~~~~~~~p-----~lli~G~~D~~ 518 (571)
+ ..+ ..++ +.|. -.+-..++.++..| +.++.+++|..
T Consensus 240 l~~~~s~~~~~~~~t~~~~~~~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Y 319 (371)
T KOG1551|consen 240 LLQDTSKMKRFNQTTNKSGYTSRNPAQSYHLLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAY 319 (371)
T ss_pred hhhhhHHHHhhccCcchhhhhhhCchhhHHHHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCcc
Confidence 1 000 0000 0000 00112344454433 56677899999
Q ss_pred CChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 519 VHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 519 v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+|......+-+.. ..+++...+ +||--...-....+.++|.+-|++
T Consensus 320 ipr~gv~~lQ~~W----Pg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 320 IPRTGVRSLQEIW----PGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred ccccCcHHHHHhC----CCCEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 9886665554444 556666666 699654444455666777776654
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.055 Score=58.31 Aligned_cols=209 Identities=17% Similarity=0.141 Sum_probs=114.3
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+..+|+|+.++|+...-..... ..+..+|+.|..+ ...+
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~~~d~~~--~~~~------- 56 (620)
T COG1506 13 ARVSDPRVSPPGGRLAYILTGLDFLKP---------------------------LYKSSLWVSDGKT--VRLL------- 56 (620)
T ss_pred hcccCcccCCCCceeEEeecccccccc---------------------------ccccceEEEeccc--cccc-------
Confidence 345677789999999998765111000 0113567766554 2122
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEE--eecCCeeeccCCcccCCC-CCccCC----
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV--EELDSWVNLHDCFTPLDK-GVTKYS---- 175 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~--~~~~~w~~~~~~~~~~~~-~~~~~~---- 175 (571)
........+.|||||+.+++..+......++|+++.+ | ...... .....|.+.+........ ......
T Consensus 57 ---~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~-g-~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 131 (620)
T COG1506 57 ---TFGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVG-G-LITKTAFGVSDARWSPDGDRIAFLTAEGASKRDGGDH 131 (620)
T ss_pred ---ccCCcccccccCCCCCEEEEEeccCCCcceEEEEecC-C-ceeeeecccccceeCCCCCeEEEEecccccccCCcee
Confidence 2345666789999999999988566556789999988 4 111111 112234443322222100 001111
Q ss_pred ---CeE-EEEEecC-CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCC--CCceeEEEEEEeCCCCCC
Q 008274 176 ---GGF-IWASEKT-GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLD--GPLESHLYCAKLYPDWNH 248 (571)
Q Consensus 176 ---d~~-~~~s~~~-g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~--~~~~~~l~~~~l~~~g~~ 248 (571)
+.+ ++...+. ...++|+++..+ ....++.+...+.... ++.+++.++...... .+.....+.... .++
T Consensus 132 ~~~~~~~~~~~~~g~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 206 (620)
T COG1506 132 LFVDRLPVWFDGRGGERSDLYVVDIES-KLIKLGLGNLDVVSFA-TDGDGRLVASIRLDDDADPWVTNLYVLIE-GNG-- 206 (620)
T ss_pred eeecccceeecCCCCcccceEEEccCc-ccccccCCCCceeeee-eCCCCceeEEeeeccccCCceEeeEEEec-CCC--
Confidence 112 2222233 378899999876 5555665655555543 566666666666544 344444444332 122
Q ss_pred CCCCCeEecCCCce-EEEEECCCCCEEEEEeeC
Q 008274 249 TLEAPVKLTNGKGK-HVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 249 ~~~~~~~lt~~~g~-~~~~~s~~g~~~v~~~s~ 280 (571)
.+..++...+. ....+.++|+.+.+....
T Consensus 207 ---~~~~~~~~~~~~~~~~~~~~gk~~~~~~~~ 236 (620)
T COG1506 207 ---ELESLTPGEGSISKLAFDADGKSIALLGTE 236 (620)
T ss_pred ---ceEEEcCCCceeeeeeeCCCCCeeEEeccC
Confidence 56677766543 344788899876665543
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.014 Score=51.10 Aligned_cols=102 Identities=25% Similarity=0.263 Sum_probs=57.6
Q ss_pred CCceEEEEEcCCCCceeecccccc-----------cchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc-cCC-CCC
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWIN-----------TVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH-NCG-RID 413 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~-----------~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~-~~~-~~~ 413 (571)
.+..++|++||.+-.+. .+|.. .--++.....+.||.|+..+.-. .+.|...... ..+ ...
T Consensus 99 ~~~kLlVLIHGSGvVrA--GQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~----~~kfye~k~np~kyirt~ 172 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRA--GQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNR----ERKFYEKKRNPQKYIRTP 172 (297)
T ss_pred CccceEEEEecCceEec--chHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCch----hhhhhhcccCcchhccch
Confidence 34568999999654332 23311 11233566678899999988641 1112111100 000 011
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD 456 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~ 456 (571)
++.+.-...+++.. .....++++.||+||++++.++-++|+
T Consensus 173 veh~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~ 213 (297)
T KOG3967|consen 173 VEHAKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPD 213 (297)
T ss_pred HHHHHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCC
Confidence 22333333333332 256789999999999999999998875
|
|
| >KOG1273 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.13 Score=47.95 Aligned_cols=168 Identities=11% Similarity=0.093 Sum_probs=84.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~~~~~~w~~ 159 (571)
.+.+||+.|-..-++ +...-..+..++||+||++++..+... .|-..|+-.|.+ +++.- .++-|.-
T Consensus 46 ~vvI~D~~T~~iar~--------lsaH~~pi~sl~WS~dgr~LltsS~D~----si~lwDl~~gs~l~rirf-~spv~~~ 112 (405)
T KOG1273|consen 46 RVVIYDFDTFRIARM--------LSAHVRPITSLCWSRDGRKLLTSSRDW----SIKLWDLLKGSPLKRIRF-DSPVWGA 112 (405)
T ss_pred cEEEEEccccchhhh--------hhccccceeEEEecCCCCEeeeecCCc----eeEEEeccCCCceeEEEc-cCcccee
Confidence 467889887543322 133556788999999999877765333 488889988874 33322 2222321
Q ss_pred ccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeec---CeEE-EEEEEEeecCcEEEEEEcCCCCcee
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEG---DWMV-EQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~---~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
.|.| ...+.++..--+.. . ++++...++.+.|... +.+. .+...+++.|++||. ++..|. .
T Consensus 113 ---q~hp------~k~n~~va~~~~~s-p--~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIit-GtsKGk--l 177 (405)
T KOG1273|consen 113 ---QWHP------RKRNKCVATIMEES-P--VVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIIT-GTSKGK--L 177 (405)
T ss_pred ---eecc------ccCCeEEEEEecCC-c--EEEEecCCceeeccCCCccccccccccccccCCCCEEEE-ecCcce--E
Confidence 1111 11223333322222 2 2344333444445432 2111 111137777876654 455553 6
Q ss_pred EEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCC
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSL 281 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~ 281 (571)
.+|.... - . ...--++|.....-...++-.|+.+++.++..
T Consensus 178 lv~~a~t--~-e--~vas~rits~~~IK~I~~s~~g~~liiNtsDR 218 (405)
T KOG1273|consen 178 LVYDAET--L-E--CVASFRITSVQAIKQIIVSRKGRFLIINTSDR 218 (405)
T ss_pred EEEecch--h-e--eeeeeeechheeeeEEEEeccCcEEEEecCCc
Confidence 6665432 0 0 00111222211222346788899988877663
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0074 Score=57.69 Aligned_cols=109 Identities=17% Similarity=0.127 Sum_probs=67.6
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCc--EEEEECCCCCC---CChhhhHHHHhccCCCCCchhHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGI--LVWKLDNRGTA---RRGLKFEASIKHNCGRIDAEDQLTGAE 422 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rG~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~ 422 (571)
..-+++|+||. .+.|...-...++.....|+ +.+.+-.+..+ +|..+-.+.. ....++...++
T Consensus 115 ~k~vlvFvHGf------Nntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~------~Sr~aLe~~lr 182 (377)
T COG4782 115 AKTVLVFVHGF------NNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTN------YSRPALERLLR 182 (377)
T ss_pred CCeEEEEEccc------CCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhh------hhHHHHHHHHH
Confidence 34799999994 33444344445666666664 34444444222 2322222222 22577889999
Q ss_pred HHHHcCCCcCCcEEEEeechHHHHHHHHHhc----C----CCeeEEEEEcCccCCc
Q 008274 423 WLIKQGLAKVGHIGLYGWSYGGYLSAITLAR----F----PDVFQCAVSGAPVTSW 470 (571)
Q Consensus 423 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~----~----~~~~~~~v~~~~~~~~ 470 (571)
+|.+.. ...+|.|++||||.++++.++-+ . +..|+-+|..+|=.|.
T Consensus 183 ~La~~~--~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 183 YLATDK--PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred HHHhCC--CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 998875 35689999999999999876533 1 2346667777775553
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.18 Score=47.44 Aligned_cols=92 Identities=10% Similarity=0.052 Sum_probs=47.9
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECC---CCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecC
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK---TGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKT 185 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~---~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~ 185 (571)
.+..+.+||||.+++++..+... ..|++.-+. .|..+.+.....-.- . ..... ....|.++. +++.....
T Consensus 113 ~I~~l~vSpDG~RvA~v~~~~~~-~~v~va~V~r~~~g~~~~l~~~~~~~~-~---~~~~v-~~v~W~~~~~L~V~~~~~ 186 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVEDGGG-GRVYVAGVVRDGDGVPRRLTGPRRVAP-P---LLSDV-TDVAWSDDSTLVVLGRSA 186 (253)
T ss_pred ceEEEEECCCCcEEEEEEecCCC-CeEEEEEEEeCCCCCcceeccceEecc-c---ccCcc-eeeeecCCCEEEEEeCCC
Confidence 78889999999999988766543 346655443 332333322110000 0 00000 011455554 66665554
Q ss_pred CccEEEEEeCCCceeeceeecC
Q 008274 186 GFRHLYLHDINGTCLGPITEGD 207 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~~~ 207 (571)
+-.....+..+++..+.++...
T Consensus 187 ~~~~~~~v~~dG~~~~~l~~~~ 208 (253)
T PF10647_consen 187 GGPVVRLVSVDGGPSTPLPSVN 208 (253)
T ss_pred CCceeEEEEccCCcccccCCCC
Confidence 4322225667788777775544
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.5 Score=48.07 Aligned_cols=153 Identities=8% Similarity=-0.036 Sum_probs=84.2
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc-eEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEe
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ-RKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASE 183 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~-~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~ 183 (571)
......++...|++|+++++--- +++.+++.|..+-+ ...++++... ...+.++++ ..+++....
T Consensus 298 ~~H~qeVCgLkws~d~~~lASGg----nDN~~~Iwd~~~~~p~~~~~~H~aA-----VKA~awcP~-----q~~lLAsGG 363 (484)
T KOG0305|consen 298 QGHRQEVCGLKWSPDGNQLASGG----NDNVVFIWDGLSPEPKFTFTEHTAA-----VKALAWCPW-----QSGLLATGG 363 (484)
T ss_pred hcccceeeeeEECCCCCeeccCC----CccceEeccCCCccccEEEecccee-----eeEeeeCCC-----ccCceEEcC
Confidence 34567889999999998665432 33457777774433 2334443321 011222221 224555443
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC-Cce
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG-KGK 262 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~-~g~ 262 (571)
...-..|...+..+++..+--...-.|..+. |++..+.|..+..-.. .+..||+++- -. ....++.- .-.
T Consensus 364 Gs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~-Wsk~~kEi~sthG~s~-n~i~lw~~ps--~~-----~~~~l~gH~~RV 434 (484)
T KOG0305|consen 364 GSADRCIKFWNTNTGARIDSVDTGSQVCSLI-WSKKYKELLSTHGYSE-NQITLWKYPS--MK-----LVAELLGHTSRV 434 (484)
T ss_pred CCcccEEEEEEcCCCcEecccccCCceeeEE-EcCCCCEEEEecCCCC-CcEEEEeccc--cc-----eeeeecCCccee
Confidence 3335667777766665433322233567776 9999888877764322 1477887753 11 23333322 223
Q ss_pred EEEEECCCCCEEEEEeeC
Q 008274 263 HVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 263 ~~~~~s~~g~~~v~~~s~ 280 (571)
...++||||..++.....
T Consensus 435 l~la~SPdg~~i~t~a~D 452 (484)
T KOG0305|consen 435 LYLALSPDGETIVTGAAD 452 (484)
T ss_pred EEEEECCCCCEEEEeccc
Confidence 445899999887665443
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.011 Score=55.11 Aligned_cols=100 Identities=18% Similarity=0.125 Sum_probs=61.3
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHH-HHHHHHHcC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLT-GAEWLIKQG 428 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~ 428 (571)
|.|+++|+..+... .|..++..|... .-|+..+.||.+.....+ ..++|+.+ .++.+.+..
T Consensus 1 ~pLF~fhp~~G~~~-------~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~----------~~l~~~a~~yv~~Ir~~Q 62 (257)
T COG3319 1 PPLFCFHPAGGSVL-------AYAPLAAALGPL-LPVYGLQAPGYGAGEQPF----------ASLDDMAAAYVAAIRRVQ 62 (257)
T ss_pred CCEEEEcCCCCcHH-------HHHHHHHHhccC-ceeeccccCccccccccc----------CCHHHHHHHHHHHHHHhC
Confidence 56788999766532 344455566555 889999999876422211 11334333 233333321
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhc---CCCeeEEEEEcCccCC
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLAR---FPDVFQCAVSGAPVTS 469 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~---~~~~~~~~v~~~~~~~ 469 (571)
....+.+.|||+||.+|.-+|.+ ...-+.-.++......
T Consensus 63 --P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 63 --PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred --CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 34589999999999999988764 3445556666555444
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.008 Score=57.25 Aligned_cols=115 Identities=14% Similarity=0.104 Sum_probs=75.3
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhC---C------cEEEEECCCCCCCCh
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK---G------ILVWKLDNRGTARRG 398 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~---G------~~v~~~d~rG~~~~~ 398 (571)
.|..++....+|+..+.+.+.+|+++ +||.|++-. +. .-++..|.+- | |.||+|..+|.|-+.
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl-~HGwPGsv~--EF-----ykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd 203 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLL-LHGWPGSVR--EF-----YKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSD 203 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEE-ecCCCchHH--HH-----HhhhhhhcCccccCCccceeEEEeccCCCCcccCc
Confidence 68889999999876544445667755 799999843 22 2235566543 3 789999999987554
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHH-HHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEE
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWL-IKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC 460 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l-~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~ 460 (571)
..-. . | .....+..+++-| ... .-++..|-|.-+|..++..++..+|+.+.+
T Consensus 204 ~~sk----~--G-Fn~~a~ArvmrkLMlRL---g~nkffiqGgDwGSiI~snlasLyPenV~G 256 (469)
T KOG2565|consen 204 APSK----T--G-FNAAATARVMRKLMLRL---GYNKFFIQGGDWGSIIGSNLASLYPENVLG 256 (469)
T ss_pred CCcc----C--C-ccHHHHHHHHHHHHHHh---CcceeEeecCchHHHHHHHHHhhcchhhhH
Confidence 3211 0 1 0112222233322 232 347899999999999999999999997655
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0073 Score=47.91 Aligned_cols=59 Identities=8% Similarity=0.126 Sum_probs=48.1
Q ss_pred CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 505 ~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
..|+|++.++.|...|.+.++.+.+.|. ..+++..++.||+... ....=..+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~----~s~lvt~~g~gHg~~~-~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP----GSRLVTVDGAGHGVYA-GGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC----CceEEEEeccCcceec-CCChHHHHHHHHHHH
Confidence 4799999999999999999999999873 3689999999999753 334455677778875
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0079 Score=55.09 Aligned_cols=74 Identities=22% Similarity=0.199 Sum_probs=44.1
Q ss_pred CCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC----CCeeEEEEEcCc
Q 008274 392 RGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF----PDVFQCAVSGAP 466 (571)
Q Consensus 392 rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~----~~~~~~~v~~~~ 466 (571)
||+..+...|.......+. ........|++|+.+.-.-.+..+.+.|||.||.+|..+++.. .+++..+.+..+
T Consensus 44 RGTd~t~~~W~ed~~~~~~-~~~~~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 44 RGTDDTLVDWKEDFNMSFQ-DETPQQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred ECCCCchhhHHHHHHhhcC-CCCHHHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 5554444444433322221 1234456677777654111234699999999999999998873 346777776554
|
|
| >KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.019 Score=58.15 Aligned_cols=138 Identities=12% Similarity=0.116 Sum_probs=74.0
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
..|.+||+.+++.+.- +.+....+..++|||||++++.+.... .|.+++...++. .|.+.... ..
T Consensus 700 ~Ti~lWDl~~~~~~~~--------l~gHtdqIf~~AWSpdGr~~AtVcKDg----~~rVy~Prs~e~-pv~Eg~gp--vg 764 (1012)
T KOG1445|consen 700 STIELWDLANAKLYSR--------LVGHTDQIFGIAWSPDGRRIATVCKDG----TLRVYEPRSREQ-PVYEGKGP--VG 764 (1012)
T ss_pred ceeeeeehhhhhhhhe--------eccCcCceeEEEECCCCcceeeeecCc----eEEEeCCCCCCC-ccccCCCC--cc
Confidence 4577889998765422 234567888999999999999887655 388888888764 34443221 00
Q ss_pred ccCCcccCCCCCccCCCe-EEEEE--ecCCccEEEEEeCCCceeeceeecCeEE---EEEEEEeecCcEEEEEEcCCCCc
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWAS--EKTGFRHLYLHDINGTCLGPITEGDWMV---EQIVGVNEASGQVYFTGTLDGPL 233 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s--~~~g~~~l~~~~~~~~~~~~lT~~~~~~---~~~~~~s~dg~~l~~~~~~~~~~ 233 (571)
.+ ... .-|.-|+ +++.+ ++..-++|-+|++..-..+.|-....++ .-++.+++|.+.|+.++-.+.
T Consensus 765 --tR--gAR--i~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~-- 836 (1012)
T KOG1445|consen 765 --TR--GAR--ILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDR-- 836 (1012)
T ss_pred --Cc--cee--EEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCc--
Confidence 00 000 0122222 33332 2222356666665443333332211122 123357888888877764332
Q ss_pred eeEEEEE
Q 008274 234 ESHLYCA 240 (571)
Q Consensus 234 ~~~l~~~ 240 (571)
...+|.+
T Consensus 837 ~v~~yEv 843 (1012)
T KOG1445|consen 837 FVNMYEV 843 (1012)
T ss_pred eEEEEEe
Confidence 3445544
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.84 Score=42.53 Aligned_cols=199 Identities=12% Similarity=0.087 Sum_probs=91.6
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
.+++.|.||.++|+.+ .+... .|+.+++++.-.+.+.+.
T Consensus 24 ~SGLTy~pd~~tLfaV-~d~~~----------------------------------~i~els~~G~vlr~i~l~------ 62 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAV-QDEPG----------------------------------EIYELSLDGKVLRRIPLD------ 62 (248)
T ss_dssp EEEEEEETTTTEEEEE-ETTTT----------------------------------EEEEEETT--EEEEEE-S------
T ss_pred ccccEEcCCCCeEEEE-ECCCC----------------------------------EEEEEcCCCCEEEEEeCC------
Confidence 5899999999998554 44322 467788876656666653
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEEC--CCCceE--EEEEeecCCee-eccCCcccCCCCCccCC--Ce
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDI--KTGQRK--VILVEELDSWV-NLHDCFTPLDKGVTKYS--GG 177 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~--~~g~~~--~l~~~~~~~w~-~~~~~~~~~~~~~~~~~--d~ 177 (571)
+.+-...+++..+|+ ++....|.+ .|+.+++ .+.... ...+-. -++. ..-..|-. ++|++ ++
T Consensus 63 --g~~D~EgI~y~g~~~-~vl~~Er~~---~L~~~~~~~~~~~~~~~~~~~~~-l~~~~~~N~G~EG----la~D~~~~~ 131 (248)
T PF06977_consen 63 --GFGDYEGITYLGNGR-YVLSEERDQ---RLYIFTIDDDTTSLDRADVQKIS-LGFPNKGNKGFEG----LAYDPKTNR 131 (248)
T ss_dssp --S-SSEEEEEE-STTE-EEEEETTTT---EEEEEEE----TT--EEEEEEEE----S---SS--EE----EEEETTTTE
T ss_pred --CCCCceeEEEECCCE-EEEEEcCCC---cEEEEEEeccccccchhhceEEe-cccccCCCcceEE----EEEcCCCCE
Confidence 344566789998885 445556664 3665555 333321 111111 0000 00011111 23444 34
Q ss_pred EEEEEecCCccEEEEEeC--CCceee-----ceeecC---eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 178 FIWASEKTGFRHLYLHDI--NGTCLG-----PITEGD---WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 178 ~~~~s~~~g~~~l~~~~~--~~~~~~-----~lT~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
+++.-++ ....||.++. .+.... .+.... .+..++ .++|..+.||+.+... +.|..++. +|.
T Consensus 132 L~v~kE~-~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l-~~~p~t~~lliLS~es----~~l~~~d~--~G~ 203 (248)
T PF06977_consen 132 LFVAKER-KPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGL-SYDPRTGHLLILSDES----RLLLELDR--QGR 203 (248)
T ss_dssp EEEEEES-SSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EE-EEETTTTEEEEEETTT----TEEEEE-T--T--
T ss_pred EEEEeCC-CChhhEEEccccCccceeeccccccccccceeccccce-EEcCCCCeEEEEECCC----CeEEEECC--CCC
Confidence 5554333 4566888875 221111 111111 223344 4788888999998754 33444443 332
Q ss_pred CCCCCCeEecCC--------CceEEEEECCCCCEEEEEeeCCCCCCEEEEE
Q 008274 248 HTLEAPVKLTNG--------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLC 290 (571)
Q Consensus 248 ~~~~~~~~lt~~--------~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~ 290 (571)
. .....|..+ .....+++.++|+. |+.+. |..+|++
T Consensus 204 ~--~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~L--YIvsE---pNlfy~f 247 (248)
T PF06977_consen 204 V--VSSLSLDRGFHGLSKDIPQPEGIAFDPDGNL--YIVSE---PNLFYRF 247 (248)
T ss_dssp E--EEEEE-STTGGG-SS---SEEEEEE-TT--E--EEEET---TTEEEEE
T ss_pred E--EEEEEeCCcccCcccccCCccEEEECCCCCE--EEEcC---CceEEEe
Confidence 0 011222221 13456789999964 34444 5577765
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG2394 consensus WD40 protein DMR-N9 [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0043 Score=61.42 Aligned_cols=70 Identities=16% Similarity=0.093 Sum_probs=47.7
Q ss_pred ecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCC
Q 008274 11 HGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG 90 (571)
Q Consensus 11 ~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~ 90 (571)
|=+.-|...| .....+.+||||++||.++.|. -|.++|.++-
T Consensus 281 NPv~~w~~~~--g~in~f~FS~DG~~LA~VSqDG------------------------------------fLRvF~fdt~ 322 (636)
T KOG2394|consen 281 NPVARWHIGE--GSINEFAFSPDGKYLATVSQDG------------------------------------FLRIFDFDTQ 322 (636)
T ss_pred CccceeEecc--ccccceeEcCCCceEEEEecCc------------------------------------eEEEeeccHH
Confidence 5566788777 3778899999999999987651 3577777765
Q ss_pred ceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEE
Q 008274 91 PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQV 126 (571)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~ 126 (571)
+..-+-- +. . +.+..++||||||+|+.=
T Consensus 323 eLlg~mk-----SY--F-GGLLCvcWSPDGKyIvtG 350 (636)
T KOG2394|consen 323 ELLGVMK-----SY--F-GGLLCVCWSPDGKYIVTG 350 (636)
T ss_pred HHHHHHH-----hh--c-cceEEEEEcCCccEEEec
Confidence 4332100 00 1 234568999999988764
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.092 Score=56.75 Aligned_cols=160 Identities=9% Similarity=-0.017 Sum_probs=80.7
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEEC------C--CCc--------eEEEEEeecCCeeeccCCcccCCC
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDI------K--TGQ--------RKVILVEELDSWVNLHDCFTPLDK 169 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~------~--~g~--------~~~l~~~~~~~w~~~~~~~~~~~~ 169 (571)
.....+..+.|||||++++.-++.. ...||..+. - +|. +..+....+..-.+
T Consensus 67 ~h~~sv~CVR~S~dG~~lAsGSDD~--~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~D---------- 134 (942)
T KOG0973|consen 67 DHDGSVNCVRFSPDGSYLASGSDDR--LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLD---------- 134 (942)
T ss_pred cccCceeEEEECCCCCeEeeccCcc--eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccce----------
Confidence 3566788899999999888765442 334555552 0 111 11111111110111
Q ss_pred CCccCCCeEEEEEec-CCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 170 GVTKYSGGFIWASEK-TGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 170 ~~~~~~d~~~~~s~~-~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
..|++++.++.|.. +..-.| ++..+-+ .+.|-...--|.... |+|-|+++.-.+++.. ..+|+.. +.+
T Consensus 135 -v~Wsp~~~~lvS~s~DnsVii--wn~~tF~~~~vl~~H~s~VKGvs-~DP~Gky~ASqsdDrt---ikvwrt~---dw~ 204 (942)
T KOG0973|consen 135 -VNWSPDDSLLVSVSLDNSVII--WNAKTFELLKVLRGHQSLVKGVS-WDPIGKYFASQSDDRT---LKVWRTS---DWG 204 (942)
T ss_pred -eccCCCccEEEEecccceEEE--EccccceeeeeeecccccccceE-ECCccCeeeeecCCce---EEEEEcc---cce
Confidence 14677776555544 333333 3333322 233333333455664 9999987766665443 6677632 221
Q ss_pred CCCCCCeEecCC-------CceEEEEECCCCCEEEEEeeCCCCCCEEEEEE
Q 008274 248 HTLEAPVKLTNG-------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCS 291 (571)
Q Consensus 248 ~~~~~~~~lt~~-------~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~ 291 (571)
....+|.. .-....+|||||.+++-..+=-+.-+.+.+++
T Consensus 205 ----i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~Iie 251 (942)
T KOG0973|consen 205 ----IEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIE 251 (942)
T ss_pred ----eeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEe
Confidence 22233321 11234599999999875443222224455544
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.16 Score=53.10 Aligned_cols=163 Identities=17% Similarity=0.109 Sum_probs=95.6
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCeeeccCCcccCCCCCccCCCeEEEEEe
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVNLHDCFTPLDKGVTKYSGGFIWASE 183 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~ 183 (571)
.+..+.+...+|+||.++++-++.... .+||. +++..+..+++.. .+.|-- ...|-|++|.|-
T Consensus 448 ~GH~GPVyg~sFsPd~rfLlScSED~s--vRLWs--l~t~s~~V~y~GH~~PVwdV------------~F~P~GyYFata 511 (707)
T KOG0263|consen 448 YGHSGPVYGCSFSPDRRFLLSCSEDSS--VRLWS--LDTWSCLVIYKGHLAPVWDV------------QFAPRGYYFATA 511 (707)
T ss_pred ecCCCceeeeeecccccceeeccCCcc--eeeee--cccceeEEEecCCCcceeeE------------EecCCceEEEec
Confidence 456778888999999998888876542 23554 4555555565532 223421 124557888764
Q ss_pred c-CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc-
Q 008274 184 K-TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG- 261 (571)
Q Consensus 184 ~-~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g- 261 (571)
. ++...||..+- ..+.++-.+.....+++.|.|+..++.-- ..+. ..++|-+. .|. .++..+...+
T Consensus 512 s~D~tArLWs~d~--~~PlRifaghlsDV~cv~FHPNs~Y~aTG-SsD~--tVRlWDv~---~G~----~VRiF~GH~~~ 579 (707)
T KOG0263|consen 512 SHDQTARLWSTDH--NKPLRIFAGHLSDVDCVSFHPNSNYVATG-SSDR--TVRLWDVS---TGN----SVRIFTGHKGP 579 (707)
T ss_pred CCCceeeeeeccc--CCchhhhcccccccceEEECCcccccccC-CCCc--eEEEEEcC---CCc----EEEEecCCCCc
Confidence 3 55678888764 33344444433333445699988765544 2222 25555443 342 4555554344
Q ss_pred eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeE
Q 008274 262 KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVL 299 (571)
Q Consensus 262 ~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~ 299 (571)
.....+||+|++++-. ..-..|.+.|+..++.++
T Consensus 580 V~al~~Sp~Gr~LaSg----~ed~~I~iWDl~~~~~v~ 613 (707)
T KOG0263|consen 580 VTALAFSPCGRYLASG----DEDGLIKIWDLANGSLVK 613 (707)
T ss_pred eEEEEEcCCCceEeec----ccCCcEEEEEcCCCcchh
Confidence 3455899999987543 333477788886666443
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0083 Score=58.01 Aligned_cols=116 Identities=17% Similarity=0.187 Sum_probs=73.2
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC---hhh-hHHHHhcc--CCCCCchhHHHHHH
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR---GLK-FEASIKHN--CGRIDAEDQLTGAE 422 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~---~~~-~~~~~~~~--~~~~~~~D~~~~~~ 422 (571)
-|++++. |.-++- +.|....-.+.....+.+-.+|.+.+|-.|.+ |.. +..+.... ..+..+.|..+.+.
T Consensus 81 gPIffYt-GNEGdi---e~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GPIFFYT-GNEGDI---EWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred CceEEEe-CCcccH---HHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 4666654 543331 22322222234444578889999999965543 221 11111110 01224678888899
Q ss_pred HHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE-cCccC
Q 008274 423 WLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS-GAPVT 468 (571)
Q Consensus 423 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~-~~~~~ 468 (571)
+|+.........|+++|.||||.++.++=.++|.++.++++ .+|+.
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 99887555678899999999999999999999998766554 55654
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.02 Score=57.01 Aligned_cols=118 Identities=16% Similarity=0.168 Sum_probs=77.9
Q ss_pred CceEEEEEcCCCCceeecccccccc-hhhhHHHHhCCcEEEEECCCCCCCChh---hhHHHHhccCCCCCchhHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTV-DMRAQYLRSKGILVWKLDNRGTARRGL---KFEASIKHNCGRIDAEDQLTGAEW 423 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~-~~~~~~l~~~G~~v~~~d~rG~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~ 423 (571)
.-|+.|++-|.+.. ...|.... ..+..+..+.|-.|+...+|=.|.+-. .-...+..-.....+.|+.++|+.
T Consensus 85 ~gPiFLmIGGEgp~---~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPE---SDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred CCceEEEEcCCCCC---CCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Confidence 34888888663221 13453222 234667778999999999996553210 000001000011237888999998
Q ss_pred HHHc-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 424 LIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 424 l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
+..+ +.-+..+.+.+|.||-|.+++++=..+|+++.++|+.+++.
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 8876 45566799999999999999999999999988888766554
|
|
| >KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.039 Score=55.96 Aligned_cols=86 Identities=19% Similarity=0.109 Sum_probs=52.4
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
-.-+++|||||+++|=+..|. .|.+|.-.+++. ++....
T Consensus 722 qIf~~AWSpdGr~~AtVcKDg------------------------------------~~rVy~Prs~e~-pv~Eg~---- 760 (1012)
T KOG1445|consen 722 QIFGIAWSPDGRRIATVCKDG------------------------------------TLRVYEPRSREQ-PVYEGK---- 760 (1012)
T ss_pred ceeEEEECCCCcceeeeecCc------------------------------------eEEEeCCCCCCC-ccccCC----
Confidence 345789999999999877652 234555444432 121110
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~ 151 (571)
..-...-..+.|.=||+.++.+--..+.+.+|..+|+++-..+.|..
T Consensus 761 -gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t 807 (1012)
T KOG1445|consen 761 -GPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYT 807 (1012)
T ss_pred -CCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCccee
Confidence 11123345688999999766654445556678888888765455543
|
|
| >PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3 | Back alignment and domain information |
|---|
Probab=95.98 E-value=1.4 Score=43.56 Aligned_cols=148 Identities=16% Similarity=0.184 Sum_probs=74.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe--EEEEEEeccC--ccEEEEEEECCCCceEEEEEeecCC
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI--LTAQVLNRSQ--TKLKVLKFDIKTGQRKVILVEELDS 156 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~i~~~~~r~~--~~~~i~~~d~~~g~~~~l~~~~~~~ 156 (571)
.|++|||++.+...+.... ...-...-.|.-+|+ -|+..++|.. +...||.+|.++|..+.+.....+.
T Consensus 79 GL~VYdL~Gk~lq~~~~Gr-------~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v~~~~~p~ 151 (381)
T PF02333_consen 79 GLYVYDLDGKELQSLPVGR-------PNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDVTDPAAPI 151 (381)
T ss_dssp EEEEEETTS-EEEEE-SS--------EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-CBTTC-E
T ss_pred CEEEEcCCCcEEEeecCCC-------cceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceEcCCCCccc
Confidence 5899999999887774320 111111112333566 3678888874 5568999999888766553211000
Q ss_pred eeeccCCcccCCCCCccC-CCe--EEEEEecCCccEEEEEeCC-Cc-----eeeceeecCeEEEEEEEEeecCcEEEEEE
Q 008274 157 WVNLHDCFTPLDKGVTKY-SGG--FIWASEKTGFRHLYLHDIN-GT-----CLGPITEGDWMVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~-~d~--~~~~s~~~g~~~l~~~~~~-~~-----~~~~lT~~~~~~~~~~~~s~dg~~l~~~~ 227 (571)
-.+....+..|- ..+ .++ +.|++.++|.-+.|.+..+ .+ ..+.+.-+. .++.++ .+....+||+.-
T Consensus 152 ~~~~~e~yGlcl---y~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~s-Q~EGCV-VDDe~g~LYvgE 226 (381)
T PF02333_consen 152 ATDLSEPYGLCL---YRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGS-QPEGCV-VDDETGRLYVGE 226 (381)
T ss_dssp E-SSSSEEEEEE---EE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS--EEEEE-EETTTTEEEEEE
T ss_pred ccccccceeeEE---eecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCC-cceEEE-EecccCCEEEec
Confidence 000000011111 111 222 5667778886666666532 22 234444433 566665 787778888863
Q ss_pred cCCCCceeEEEEEEeCCC
Q 008274 228 TLDGPLESHLYCAKLYPD 245 (571)
Q Consensus 228 ~~~~~~~~~l~~~~l~~~ 245 (571)
. + ..||++++..+
T Consensus 227 E--~---~GIW~y~Aep~ 239 (381)
T PF02333_consen 227 E--D---VGIWRYDAEPE 239 (381)
T ss_dssp T--T---TEEEEEESSCC
T ss_pred C--c---cEEEEEecCCC
Confidence 2 2 56788877433
|
1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A. |
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.012 Score=54.00 Aligned_cols=21 Identities=29% Similarity=0.593 Sum_probs=18.1
Q ss_pred CCcEEEEeechHHHHHHHHHh
Q 008274 432 VGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 432 ~~~i~l~G~S~GG~~a~~~~~ 452 (571)
..+|.++|||+||.++-.++.
T Consensus 77 ~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred cccceEEEecccHHHHHHHHH
Confidence 368999999999999977765
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=2 Score=48.11 Aligned_cols=52 Identities=13% Similarity=0.110 Sum_probs=32.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEc-cCCeEEEEEEeccCccEEEEEEECCCCc
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM-HGNILTAQVLNRSQTKLKVLKFDIKTGQ 145 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws-pDg~~i~~~~~r~~~~~~i~~~d~~~g~ 145 (571)
.+.+||+.+++.... +. ....+..+.|+ ++|+.++...... .|+.+|+.++.
T Consensus 599 ~v~iWd~~~~~~~~~-~~--------~~~~v~~v~~~~~~g~~latgs~dg----~I~iwD~~~~~ 651 (793)
T PLN00181 599 SVKLWSINQGVSIGT-IK--------TKANICCVQFPSESGRSLAFGSADH----KVYYYDLRNPK 651 (793)
T ss_pred EEEEEECCCCcEEEE-Ee--------cCCCeEEEEEeCCCCCEEEEEeCCC----eEEEEECCCCC
Confidence 478889987754321 21 22345667885 5687777654332 48888988764
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.026 Score=55.54 Aligned_cols=101 Identities=16% Similarity=0.072 Sum_probs=61.1
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcE---EEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGIL---VWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWL 424 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~---v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l 424 (571)
+.|+ +++||...... .+..+...+...|+. +..++.++...... ... ..+-+..-++..
T Consensus 59 ~~pi-vlVhG~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~-------~~~ql~~~V~~~ 120 (336)
T COG1075 59 KEPI-VLVHGLGGGYG-------NFLPLDYRLAILGWLTNGVYAFELSGGDGTYS---LAV-------RGEQLFAYVDEV 120 (336)
T ss_pred CceE-EEEccCcCCcc-------hhhhhhhhhcchHHHhcccccccccccCCCcc---ccc-------cHHHHHHHHHHH
Confidence 4455 56899633322 233345557777887 88888775411110 000 012223333333
Q ss_pred HHcCCCcCCcEEEEeechHHHHHHHHHhcCC--CeeEEEEEcCccC
Q 008274 425 IKQGLAKVGHIGLYGWSYGGYLSAITLARFP--DVFQCAVSGAPVT 468 (571)
Q Consensus 425 ~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~--~~~~~~v~~~~~~ 468 (571)
.... ...++.++|||+||.++..++...+ .+++..+..++..
T Consensus 121 l~~~--ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 121 LAKT--GAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred Hhhc--CCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 3322 3478999999999999998888877 7888888877654
|
|
| >KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.12 Score=48.46 Aligned_cols=36 Identities=8% Similarity=0.181 Sum_probs=22.9
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT 143 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~ 143 (571)
+...++..+|||||+.|..++.-.- +..++.++...
T Consensus 90 g~agls~~~WSPdgrhiL~tseF~l-riTVWSL~t~~ 125 (447)
T KOG4497|consen 90 GQAGLSSISWSPDGRHILLTSEFDL-RITVWSLNTQK 125 (447)
T ss_pred CCCcceeeeECCCcceEeeeeccee-EEEEEEeccce
Confidence 4446677899999998887766542 22344444433
|
|
| >KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.75 Score=46.45 Aligned_cols=123 Identities=13% Similarity=0.038 Sum_probs=67.2
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
..||+++++ |....+.+. ..+.+.+++|+|+|+-.+.+-.-... .+-++|+... .+..-..+.-
T Consensus 251 q~Lyll~t~-g~s~~V~L~--------k~GPVhdv~W~~s~~EF~VvyGfMPA--kvtifnlr~~---~v~df~egpR-- 314 (566)
T KOG2315|consen 251 QTLYLLATQ-GESVSVPLL--------KEGPVHDVTWSPSGREFAVVYGFMPA--KVTIFNLRGK---PVFDFPEGPR-- 314 (566)
T ss_pred ceEEEEEec-CceEEEecC--------CCCCceEEEECCCCCEEEEEEecccc--eEEEEcCCCC---EeEeCCCCCc--
Confidence 468999998 566666553 57788899999999965555443322 3445555543 2222111100
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCC-ccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcC
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTG-FRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g-~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
...-+++.+ |++++-=+. ...+-++|..+ .+.|++-.-.-.....|+|||.+++..++.
T Consensus 315 ---------N~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n--~K~i~~~~a~~tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 315 ---------NTAFFNPHGNIILLAGFGNLPGDMEVWDVPN--RKLIAKFKAANTTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred ---------cceEECCCCCEEEEeecCCCCCceEEEeccc--hhhccccccCCceEEEEcCCCcEEEEEecc
Confidence 000123333 555542110 12344555444 455655433333444699999999888874
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.017 Score=58.21 Aligned_cols=91 Identities=19% Similarity=0.159 Sum_probs=61.4
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..-+|+.+|||+.......+... ++.++..+.|+-|+.+||.-.... .| ....+++.-+.-|+++.
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~---YLr~Wa~aL~cPiiSVdYSLAPEa--PF---------PRaleEv~fAYcW~inn 460 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEP---YLRSWAQALGCPIISVDYSLAPEA--PF---------PRALEEVFFAYCWAINN 460 (880)
T ss_pred CceEEEEecCCceeeeccccccH---HHHHHHHHhCCCeEEeeeccCCCC--CC---------CcHHHHHHHHHHHHhcC
Confidence 44689999999876654443221 134455579999999999643211 11 12256677777888876
Q ss_pred C---CCcCCcEEEEeechHHHHHHHHHh
Q 008274 428 G---LAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 428 ~---~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
. ....+||++.|-|+||.+.+..++
T Consensus 461 ~allG~TgEriv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 461 CALLGSTGERIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred HHHhCcccceEEEeccCCCcceeehhHH
Confidence 2 235789999999999998765554
|
|
| >KOG2096 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.61 E-value=1 Score=42.28 Aligned_cols=160 Identities=11% Similarity=0.069 Sum_probs=77.0
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEE-ECCCC---ceEEEEEeecC
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKF-DIKTG---QRKVILVEELD 155 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~-d~~~g---~~~~l~~~~~~ 155 (571)
..+.+|++++.....++. ........+-||||++++...--. +-.+|.. =.+.| +.+++.+....
T Consensus 209 t~i~lw~lkGq~L~~idt---------nq~~n~~aavSP~GRFia~~gFTp--DVkVwE~~f~kdG~fqev~rvf~LkGH 277 (420)
T KOG2096|consen 209 TKICLWDLKGQLLQSIDT---------NQSSNYDAAVSPDGRFIAVSGFTP--DVKVWEPIFTKDGTFQEVKRVFSLKGH 277 (420)
T ss_pred CcEEEEecCCceeeeecc---------ccccccceeeCCCCcEEEEecCCC--CceEEEEEeccCcchhhhhhhheeccc
Confidence 457778888443344433 223344568899999877653222 1112221 12233 33444332211
Q ss_pred ----CeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCC---Cceeeceeec--------CeEEEEEEEEeec
Q 008274 156 ----SWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDIN---GTCLGPITEG--------DWMVEQIVGVNEA 219 (571)
Q Consensus 156 ----~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~---~~~~~~lT~~--------~~~~~~~~~~s~d 219 (571)
.|. .| +++. -+....++|-+.||-.|.. +..+..|-.+ .-.+ .. ..+|.
T Consensus 278 ~saV~~~----aF---------sn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~-RL-~lsP~ 342 (420)
T KOG2096|consen 278 QSAVLAA----AF---------SNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPV-RL-ELSPS 342 (420)
T ss_pred hhheeee----ee---------CCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCce-EE-EeCCC
Confidence 121 12 2222 3334466787777766531 1122222111 1122 23 47899
Q ss_pred CcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC--CCceEEEEECCCCCEEEE
Q 008274 220 SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN--GKGKHVAVLDHNMRNFVD 276 (571)
Q Consensus 220 g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~--~~g~~~~~~s~~g~~~v~ 276 (571)
|+.|..+.. ...++|... +|. ...++-. +....+.+++++|++++-
T Consensus 343 g~~lA~s~g----s~l~~~~se---~g~----~~~~~e~~h~~~Is~is~~~~g~~~at 390 (420)
T KOG2096|consen 343 GDSLAVSFG----SDLKVFASE---DGK----DYPELEDIHSTTISSISYSSDGKYIAT 390 (420)
T ss_pred CcEEEeecC----CceEEEEcc---cCc----cchhHHHhhcCceeeEEecCCCcEEee
Confidence 987777643 136666543 333 2222221 222345599999998754
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.57 E-value=5.9 Score=45.65 Aligned_cols=85 Identities=11% Similarity=0.096 Sum_probs=40.7
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCee---eccCCcccCCCCCccCCCe-EEEEEecCC
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWV---NLHDCFTPLDKGVTKYSGG-FIWASEKTG 186 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~---~~~~~~~~~~~~~~~~~d~-~~~~s~~~g 186 (571)
..++++|++..+++.. ..+ ..|+++|..+|..+.+.... ..... .....|.. +.+...++++ .+++++..
T Consensus 686 ~gVa~dp~~g~LyVad-~~~--~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~-P~GIavspdG~~LYVADs~- 760 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAM-AGQ--HQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQ-PSGISLSPDLKELYIADSE- 760 (1057)
T ss_pred eEEEEecCCCeEEEEE-CCC--CeEEEEECCCCeEEEEecCCccccCCCCccccccccC-ccEEEEeCCCCEEEEEECC-
Confidence 3578999554443332 221 24999999988765543210 00000 00001111 1112334543 45555543
Q ss_pred ccEEEEEeCCCceee
Q 008274 187 FRHLYLHDINGTCLG 201 (571)
Q Consensus 187 ~~~l~~~~~~~~~~~ 201 (571)
...|.+++++++..+
T Consensus 761 n~~Irv~D~~tg~~~ 775 (1057)
T PLN02919 761 SSSIRALDLKTGGSR 775 (1057)
T ss_pred CCeEEEEECCCCcEE
Confidence 356888887765443
|
|
| >KOG4328 consensus WD40 protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.57 E-value=2.7 Score=41.51 Aligned_cols=161 Identities=11% Similarity=0.095 Sum_probs=91.6
Q ss_pred CCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEEEEe-ecCCeeeccCCcccCCCCCccCCCeEEEEEe
Q 008274 106 YDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILVE-ELDSWVNLHDCFTPLDKGVTKYSGGFIWASE 183 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~-~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~ 183 (571)
+....+..+.|+|-+. .++..+..+ -|-..|.+++....+... .+..|+. .+... ..+.-++..+
T Consensus 232 ~hs~~Vs~l~F~P~n~s~i~ssSyDG----tiR~~D~~~~i~e~v~s~~~d~~~fs------~~d~~---~e~~~vl~~~ 298 (498)
T KOG4328|consen 232 PHSGPVSGLKFSPANTSQIYSSSYDG----TIRLQDFEGNISEEVLSLDTDNIWFS------SLDFS---AESRSVLFGD 298 (498)
T ss_pred cCCccccceEecCCChhheeeeccCc----eeeeeeecchhhHHHhhcCccceeee------ecccc---CCCccEEEee
Confidence 3455678889999776 444443333 278889998876554432 2223332 22211 1223333334
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE-eCCCCCCCCCCCeEecC---C
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK-LYPDWNHTLEAPVKLTN---G 259 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~-l~~~g~~~~~~~~~lt~---~ 259 (571)
.-|..+++-...++.+...++-.+.-+..+. +.|-..+++.++..++- ..||-+. + .+.. .+ .|.. .
T Consensus 299 ~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~-~NP~~p~~laT~s~D~T--~kIWD~R~l--~~K~---sp-~lst~~Hr 369 (498)
T KOG4328|consen 299 NVGNFNVIDLRTDGSEYENLRLHKKKITSVA-LNPVCPWFLATASLDQT--AKIWDLRQL--RGKA---SP-FLSTLPHR 369 (498)
T ss_pred cccceEEEEeecCCccchhhhhhhcccceee-cCCCCchheeecccCcc--eeeeehhhh--cCCC---Cc-ceeccccc
Confidence 5456667766677776666766555566664 88888888888876653 5566442 2 2220 11 2322 2
Q ss_pred CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 260 KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 260 ~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
--.+++.|||+|-.++.++..- +|.+++.
T Consensus 370 rsV~sAyFSPs~gtl~TT~~D~----~IRv~ds 398 (498)
T KOG4328|consen 370 RSVNSAYFSPSGGTLLTTCQDN----EIRVFDS 398 (498)
T ss_pred ceeeeeEEcCCCCceEeeccCC----ceEEeec
Confidence 2356678999887777665432 4555543
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.088 Score=54.33 Aligned_cols=131 Identities=18% Similarity=0.214 Sum_probs=84.9
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh----hhh--HH
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG----LKF--EA 403 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~----~~~--~~ 403 (571)
..|...++.|..- . ++ ++.+ ||++..... .+..... .+.....+||+++.-|- |+.+.. ..| ..
T Consensus 15 ~~i~fev~LP~~W-N--gR---~~~~-GgGG~~G~i-~~~~~~~-~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~ 84 (474)
T PF07519_consen 15 PNIRFEVWLPDNW-N--GR---FLQV-GGGGFAGGI-NYADGKA-SMATALARGYATASTDS-GHQGSAGSDDASFGNNP 84 (474)
T ss_pred ceEEEEEECChhh-c--cC---eEEE-CCCeeeCcc-ccccccc-ccchhhhcCeEEEEecC-CCCCCcccccccccCCH
Confidence 3788999999842 1 22 2333 433332211 1111000 03455688999999995 332221 111 12
Q ss_pred HHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 404 SIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 404 ~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
....+++...+++...+.+.+++. ....+++--..|.|.||.-++..|.++|+.|.++++.+|..+|
T Consensus 85 ~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 85 EALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 223455555677788888888876 3356788999999999999999999999999999999998764
|
It also includes several bacterial homologues of unknown function. |
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=95.53 E-value=1.8 Score=40.45 Aligned_cols=123 Identities=20% Similarity=0.166 Sum_probs=66.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
++++|++.+...-...+ .....-+-.+.|++|++.|+-+.... .|+..|+++|++.+-.+. ...+.+.
T Consensus 70 ~I~LWnv~gdceN~~~l-------kgHsgAVM~l~~~~d~s~i~S~gtDk----~v~~wD~~tG~~~rk~k~-h~~~vNs 137 (338)
T KOG0265|consen 70 AIVLWNVYGDCENFWVL-------KGHSGAVMELHGMRDGSHILSCGTDK----TVRGWDAETGKRIRKHKG-HTSFVNS 137 (338)
T ss_pred eEEEEeccccccceeee-------ccccceeEeeeeccCCCEEEEecCCc----eEEEEecccceeeehhcc-ccceeee
Confidence 46677765533322222 22345677789999999877765443 499999999986543221 1223332
Q ss_pred cCCcccCCCCCccCCCeEEEEE-ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWAS-EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s-~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~ 227 (571)
..|.. -+-.++.| ..+| .+-++|.-.++..++-...++...+. |..++..+.--.
T Consensus 138 ---~~p~r------rg~~lv~SgsdD~--t~kl~D~R~k~~~~t~~~kyqltAv~-f~d~s~qv~sgg 193 (338)
T KOG0265|consen 138 ---LDPSR------RGPQLVCSGSDDG--TLKLWDIRKKEAIKTFENKYQLTAVG-FKDTSDQVISGG 193 (338)
T ss_pred ---cCccc------cCCeEEEecCCCc--eEEEEeecccchhhccccceeEEEEE-ecccccceeecc
Confidence 11211 11133333 3344 45556655554444444566666664 877776655443
|
|
| >KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.72 Score=44.81 Aligned_cols=146 Identities=10% Similarity=0.026 Sum_probs=71.0
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEe--c
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASE--K 184 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~--~ 184 (571)
...+-+..|||||++|+.+... + ..+.++++|.+ ..++. .+..| .|..+........+.++..+. +
T Consensus 186 ~~eV~DL~FS~dgk~lasig~d-~----~~VW~~~~g~~~a~~t~-~~k~~-----~~~~cRF~~d~~~~~l~laa~~~~ 254 (398)
T KOG0771|consen 186 HAEVKDLDFSPDGKFLASIGAD-S----ARVWSVNTGAALARKTP-FSKDE-----MFSSCRFSVDNAQETLRLAASQFP 254 (398)
T ss_pred cCccccceeCCCCcEEEEecCC-c----eEEEEeccCchhhhcCC-cccch-----hhhhceecccCCCceEEEEEecCC
Confidence 3455667899999999888543 2 45557777733 12221 11112 233333221112223333222 2
Q ss_pred CCccEEEEEeCCCc----eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC
Q 008274 185 TGFRHLYLHDINGT----CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK 260 (571)
Q Consensus 185 ~g~~~l~~~~~~~~----~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~ 260 (571)
.+.-.++...+-.+ ..++.+...-.+... .+|+||+.+..-+..+. ..+|...- .+..++....
T Consensus 255 ~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl-~VS~dGkf~AlGT~dGs---Vai~~~~~--------lq~~~~vk~a 322 (398)
T KOG0771|consen 255 GGGVRLCDISLWSGSNFLRLRKKIKRFKSISSL-AVSDDGKFLALGTMDGS---VAIYDAKS--------LQRLQYVKEA 322 (398)
T ss_pred CCceeEEEeeeeccccccchhhhhhccCcceeE-EEcCCCcEEEEeccCCc---EEEEEece--------eeeeEeehhh
Confidence 33333333333222 233334333344444 48999998888777433 55554321 0112222211
Q ss_pred --c-eEEEEECCCCCEEEE
Q 008274 261 --G-KHVAVLDHNMRNFVD 276 (571)
Q Consensus 261 --g-~~~~~~s~~g~~~v~ 276 (571)
+ .-...|+||.++++-
T Consensus 323 H~~~VT~ltF~Pdsr~~~s 341 (398)
T KOG0771|consen 323 HLGFVTGLTFSPDSRYLAS 341 (398)
T ss_pred heeeeeeEEEcCCcCcccc
Confidence 1 223489999887765
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.13 Score=50.56 Aligned_cols=55 Identities=18% Similarity=0.125 Sum_probs=36.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
.|.+||.++|+...- + ..+.....+.+-||+.-++++-.- ...|...|+.+|+..
T Consensus 281 ~lKlwDtETG~~~~~-f--------~~~~~~~cvkf~pd~~n~fl~G~s---d~ki~~wDiRs~kvv 335 (503)
T KOG0282|consen 281 FLKLWDTETGQVLSR-F--------HLDKVPTCVKFHPDNQNIFLVGGS---DKKIRQWDIRSGKVV 335 (503)
T ss_pred eeeeeccccceEEEE-E--------ecCCCceeeecCCCCCcEEEEecC---CCcEEEEeccchHHH
Confidence 468899999986532 1 234556678999999544444221 224888899998743
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.054 Score=55.09 Aligned_cols=62 Identities=16% Similarity=0.046 Sum_probs=50.7
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHc---------------C-----CC-eeEEEcCCCCCCCCCCCcHHHHHHHHH
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAA---------------R-----KP-YEILIFPDERHMPRRHRDRIYMEERIW 564 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~---------------~-----~~-~~~~~~~~~~H~~~~~~~~~~~~~~i~ 564 (571)
.++||..|..|.+|+...++.+.++|.-. | .+ .++..+-++||.. +..++..++.+.
T Consensus 348 irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmV--p~qP~~al~m~~ 425 (433)
T PLN03016 348 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTA--EYRPNETFIMFQ 425 (433)
T ss_pred ceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCC--CCCHHHHHHHHH
Confidence 59999999999999999999999888511 1 23 7888889999988 347888889999
Q ss_pred HHHHH
Q 008274 565 EFIER 569 (571)
Q Consensus 565 ~fl~~ 569 (571)
+|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99864
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=95.35 E-value=1.9 Score=48.66 Aligned_cols=109 Identities=13% Similarity=0.121 Sum_probs=57.4
Q ss_pred CCceeEEEEEccCCeEEEEEEeccC-c-cEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEe
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQ-T-KLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASE 183 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~-~-~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~ 183 (571)
.+.....++|-.||+++|...-..+ + .+.|-+++-+ |+..-..+ +. ..+...++|.|.| ++..+.
T Consensus 208 ~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE-~v----------~gLe~~l~WrPsG~lIA~~q 275 (928)
T PF04762_consen 208 WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSE-PV----------DGLEGALSWRPSGNLIASSQ 275 (928)
T ss_pred cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccc-cC----------CCccCCccCCCCCCEEEEEE
Confidence 3446667899999997765543222 2 3445555555 54322211 11 1222233555555 555544
Q ss_pred c-CCccEEEEEeCCCceeec----eeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 184 K-TGFRHLYLHDINGTCLGP----ITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 184 ~-~g~~~l~~~~~~~~~~~~----lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
+ .+...|..+...|-.-.. +......+... .|+.|+..|.+...
T Consensus 276 ~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l-~Wn~ds~iLAv~~~ 324 (928)
T PF04762_consen 276 RLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIEL-AWNSDSEILAVWLE 324 (928)
T ss_pred EcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEE-EECCCCCEEEEEec
Confidence 4 334555556555533222 22234455565 49999988887653
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.066 Score=51.95 Aligned_cols=168 Identities=17% Similarity=0.246 Sum_probs=90.6
Q ss_pred ccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHH
Q 008274 368 WINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLS 447 (571)
Q Consensus 368 ~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a 447 (571)
|..--...+..|+++|+-|+.+|---.- |....... ...|+...+++...+- ...++.++|+|+|+=+-
T Consensus 272 Wr~lDk~v~~~l~~~gvpVvGvdsLRYf-----W~~rtPe~----~a~Dl~r~i~~y~~~w--~~~~~~liGySfGADvl 340 (456)
T COG3946 272 WRDLDKEVAEALQKQGVPVVGVDSLRYF-----WSERTPEQ----IAADLSRLIRFYARRW--GAKRVLLIGYSFGADVL 340 (456)
T ss_pred hhhhhHHHHHHHHHCCCceeeeehhhhh-----hccCCHHH----HHHHHHHHHHHHHHhh--CcceEEEEeecccchhh
Confidence 3333455688999999999999843110 11111111 2577888888776653 56799999999999887
Q ss_pred HHHHhcCCCeeEEEEEcCccCCcc---cccchhhhhhcCCCCCChhhhccCCcchhhccCC-CcEEEEecCCCC--CCCh
Q 008274 448 AITLARFPDVFQCAVSGAPVTSWD---GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDE--NVHF 521 (571)
Q Consensus 448 ~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~-~p~lli~G~~D~--~v~~ 521 (571)
-.+..+-|...+..|....+..+. .|... .+.++|...+. .......+.++. ..+..|+|.+|. .||
T Consensus 341 P~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~-v~gWlg~~~~g-----~~~~~~~~~~l~~~~v~CiYG~~e~d~~Cp- 413 (456)
T COG3946 341 PFAYNRLPPATRQRVRMVSLLGLGRTADFEIS-VEGWLGMAGEG-----AGDVVPDIAKLPLARVQCIYGQEEKDTACP- 413 (456)
T ss_pred HHHHHhCCHHHHHHHHHHHHHhccccceEEEE-EeeeeccCCcC-----CCCcchhhhhCCcceeEEEecCccccccCC-
Confidence 666655454322211111111110 01000 11122221111 123445566666 478999997654 443
Q ss_pred HHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHH
Q 008274 522 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEF 566 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 566 (571)
.|+. +.++.+.+|+ ||.| ..+-+.+.+.|++=
T Consensus 414 --------~l~~--~~~~~v~lpG-gHHF--d~dy~~la~~il~~ 445 (456)
T COG3946 414 --------SLKA--KGVDTVKLPG-GHHF--DGDYEKLAKAILQG 445 (456)
T ss_pred --------cchh--hcceeEecCC-Cccc--CccHHHHHHHHHHH
Confidence 2333 3456678999 5555 24455555666553
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.083 Score=53.80 Aligned_cols=62 Identities=15% Similarity=0.066 Sum_probs=50.2
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHc---------------C-----CC-eeEEEcCCCCCCCCCCCcHHHHHHHHH
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAA---------------R-----KP-YEILIFPDERHMPRRHRDRIYMEERIW 564 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~---------------~-----~~-~~~~~~~~~~H~~~~~~~~~~~~~~i~ 564 (571)
.++||..|..|.+|+...++++.+.|.-. | .+ .++..+-++||.. . ..++..++.+.
T Consensus 352 irVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmV-p-~qP~~al~m~~ 429 (437)
T PLN02209 352 YRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTA-E-YLPEESSIMFQ 429 (437)
T ss_pred ceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCc-C-cCHHHHHHHHH
Confidence 37999999999999999999999888511 1 23 7888889999987 3 47888888888
Q ss_pred HHHHH
Q 008274 565 EFIER 569 (571)
Q Consensus 565 ~fl~~ 569 (571)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 88854
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.035 Score=66.03 Aligned_cols=98 Identities=13% Similarity=0.082 Sum_probs=60.6
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.++++||.++... .|..+++.| ..++.|+.++.+|.+.... ....++++.+.+...+...
T Consensus 1069 ~~l~~lh~~~g~~~-------~~~~l~~~l-~~~~~v~~~~~~g~~~~~~----------~~~~l~~la~~~~~~i~~~- 1129 (1296)
T PRK10252 1069 PTLFCFHPASGFAW-------QFSVLSRYL-DPQWSIYGIQSPRPDGPMQ----------TATSLDEVCEAHLATLLEQ- 1129 (1296)
T ss_pred CCeEEecCCCCchH-------HHHHHHHhc-CCCCcEEEEECCCCCCCCC----------CCCCHHHHHHHHHHHHHhh-
Confidence 56788999776533 234445555 4579999999998764311 0112333333222222211
Q ss_pred CcCCcEEEEeechHHHHHHHHHhc---CCCeeEEEEEcCc
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLAR---FPDVFQCAVSGAP 466 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~---~~~~~~~~v~~~~ 466 (571)
....++.++|||+||.++..++.+ .++.+..++..++
T Consensus 1130 ~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1130 QPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 123579999999999999998874 5677777766554
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.28 E-value=4.7 Score=42.38 Aligned_cols=162 Identities=15% Similarity=0.171 Sum_probs=84.4
Q ss_pred eeccCC-CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCC--CceEEE
Q 008274 19 QEEMDR-KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG--GPVSWM 95 (571)
Q Consensus 19 ~~~~~~-~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~--~~~~~~ 95 (571)
.|++.. ...+.|.+||+.+.|++.++...+.. |+.-.+.+ .+.+.+
T Consensus 169 ~d~i~~~~~~~~Wa~d~~~lfYt~~d~~~rp~k-------------------------------v~~h~~gt~~~~d~lv 217 (682)
T COG1770 169 PDEITNTSGSFAWAADGKTLFYTRLDENHRPDK-------------------------------VWRHRLGTPGSSDELV 217 (682)
T ss_pred chhhcccccceEEecCCCeEEEEEEcCCCCcce-------------------------------EEEEecCCCCCcceEE
Confidence 334443 67899999999999999887764432 33333333 222222
Q ss_pred eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC--CceEEEEEeecCCeeeccCCcccCCCCCcc
Q 008274 96 DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT--GQRKVILVEELDSWVNLHDCFTPLDKGVTK 173 (571)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~--g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~ 173 (571)
-.+ ..+.+...+.=|-..+.|+... .+...++++.++.+. ++.+.+...+.+.--. . ..
T Consensus 218 yeE-------~d~~f~~~v~~s~s~~yi~i~~-~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~------~-----eh 278 (682)
T COG1770 218 YEE-------KDDRFFLSVGRSRSEAYIVISL-GSHITSEVRLLDADDPEAEPKVVLPRENGVEYS------V-----EH 278 (682)
T ss_pred EEc-------CCCcEEEEeeeccCCceEEEEc-CCCcceeEEEEecCCCCCceEEEEEcCCCcEEe------e-----ee
Confidence 111 1334444455455566665554 333456778777775 4456665544331110 0 11
Q ss_pred CCCeEEEEEecCC-ccEEEEEeC--CCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCC
Q 008274 174 YSGGFIWASEKTG-FRHLYLHDI--NGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDG 231 (571)
Q Consensus 174 ~~d~~~~~s~~~g-~~~l~~~~~--~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~ 231 (571)
-+|.|++.++.+| ...|+..+. .....+.+......+. +.+++-=.++|+..-..++
T Consensus 279 ~~d~f~i~sN~~gknf~l~~ap~~~~~~~w~~~I~h~~~~~-l~~~~~f~~~lVl~eR~~g 338 (682)
T COG1770 279 GGDRFYILSNADGKNFKLVRAPVSADKSNWRELIPHREDVR-LEGVDLFADHLVLLERQEG 338 (682)
T ss_pred cCcEEEEEecCCCcceEEEEccCCCChhcCeeeeccCCCce-eeeeeeeccEEEEEecccC
Confidence 2556888899888 566777665 1122333333221111 1123333456666555444
|
|
| >TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171 | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.12 Score=55.86 Aligned_cols=74 Identities=23% Similarity=0.242 Sum_probs=54.1
Q ss_pred eEEEEEecCCccEEEEEeCCCceeece-eecCeEEEEEEEEeecCcEEEE-EEcCCCCceeEEEEEEeCCCCCCCCCCCe
Q 008274 177 GFIWASEKTGFRHLYLHDINGTCLGPI-TEGDWMVEQIVGVNEASGQVYF-TGTLDGPLESHLYCAKLYPDWNHTLEAPV 254 (571)
Q Consensus 177 ~~~~~s~~~g~~~l~~~~~~~~~~~~l-T~~~~~~~~~~~~s~dg~~l~~-~~~~~~~~~~~l~~~~l~~~g~~~~~~~~ 254 (571)
+|.|.++..| +|.++|.+|...+.+ +.....+-.+. |||||+.|.| ++-+.-+....||+.+|...++ .+.
T Consensus 320 kiAfv~~~~~--~L~~~D~dG~n~~~ve~~~~~~i~sP~-~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~----~~v 392 (912)
T TIGR02171 320 KLAFRNDVTG--NLAYIDYTKGASRAVEIEDTISVYHPD-ISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGS----GLV 392 (912)
T ss_pred eEEEEEcCCC--eEEEEecCCCCceEEEecCCCceecCc-CCCCCCEEEEEEeecCCCCCceEEEEehhccCC----Cce
Confidence 4777776555 899999999988888 77666666664 9999999999 5444412347899999965554 444
Q ss_pred Eec
Q 008274 255 KLT 257 (571)
Q Consensus 255 ~lt 257 (571)
.|.
T Consensus 393 kl~ 395 (912)
T TIGR02171 393 KLP 395 (912)
T ss_pred Eee
Confidence 554
|
This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown. |
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=95.21 E-value=1.7 Score=48.99 Aligned_cols=101 Identities=11% Similarity=0.046 Sum_probs=55.0
Q ss_pred ccCCCe-EEEEEe---cCC-ccEEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCC
Q 008274 172 TKYSGG-FIWASE---KTG-FRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPD 245 (571)
Q Consensus 172 ~~~~d~-~~~~s~---~~g-~~~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~ 245 (571)
+|.+|| |+.++. ..| .+.|.+++.+| +..- |++.. ......+|-|.|+.|.-+....+. ..|..+.- .
T Consensus 216 SWRGDG~yFAVss~~~~~~~~R~iRVy~ReG-~L~s-tSE~v~gLe~~l~WrPsG~lIA~~q~~~~~--~~VvFfEr--N 289 (928)
T PF04762_consen 216 SWRGDGEYFAVSSVEPETGSRRVIRVYSREG-ELQS-TSEPVDGLEGALSWRPSGNLIASSQRLPDR--HDVVFFER--N 289 (928)
T ss_pred EECCCCcEEEEEEEEcCCCceeEEEEECCCc-eEEe-ccccCCCccCCccCCCCCCEEEEEEEcCCC--cEEEEEec--C
Confidence 577887 444432 355 67778888764 2222 22221 123455799999988877764443 33433332 2
Q ss_pred CCCCCCCCeEecC---CCceEEEEECCCCCEEEEEeeC
Q 008274 246 WNHTLEAPVKLTN---GKGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 246 g~~~~~~~~~lt~---~~g~~~~~~s~~g~~~v~~~s~ 280 (571)
|- + .....|.. +.......|++|+..++.....
T Consensus 290 GL-r-hgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~ 325 (928)
T PF04762_consen 290 GL-R-HGEFTLRFDPEEEKVIELAWNSDSEILAVWLED 325 (928)
T ss_pred Cc-E-eeeEecCCCCCCceeeEEEECCCCCEEEEEecC
Confidence 21 0 01122221 2234556899999988887644
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.21 E-value=3.9 Score=41.11 Aligned_cols=226 Identities=11% Similarity=0.047 Sum_probs=111.9
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEE--EeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL--VEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~--~~~~~~w~ 158 (571)
++.+||.++|....- ...- ....-....+.||-|.++++.+.... |+++++ |+.....- .....+..
T Consensus 109 ~~~vwd~~sg~iv~s-f~~~----~q~~~~Wp~~k~s~~D~y~ARvv~~s-----l~i~e~-t~n~~~~p~~~lr~~gi~ 177 (561)
T COG5354 109 NVFVWDIASGMIVFS-FNGI----SQPYLGWPVLKFSIDDKYVARVVGSS-----LYIHEI-TDNIEEHPFKNLRPVGIL 177 (561)
T ss_pred ceeEEeccCceeEee-cccc----CCcccccceeeeeecchhhhhhccCe-----EEEEec-CCccccCchhhcccccee
Confidence 689999999976432 1100 00101122468999998877664332 777775 44322110 00001111
Q ss_pred eccCCcccCCCCCccCCCeE-EEEEecCC---ccEEEEEeCCCceeeceeecCeEEEEE-EEEeecCcEEEEEEcCC---
Q 008274 159 NLHDCFTPLDKGVTKYSGGF-IWASEKTG---FRHLYLHDINGTCLGPITEGDWMVEQI-VGVNEASGQVYFTGTLD--- 230 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~-~~~s~~~g---~~~l~~~~~~~~~~~~lT~~~~~~~~~-~~~s~dg~~l~~~~~~~--- 230 (571)
.|...+.+ ..+.+ +|+.+..| .-.|+.++. +. ...|..-+.+..+ ..|.+.|++|.+....+
T Consensus 178 ----dFsisP~~---n~~~la~~tPEk~~kpa~~~i~sIp~-~s--~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ks 247 (561)
T COG5354 178 ----DFSISPEG---NHDELAYWTPEKLNKPAMVRILSIPK-NS--VLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKS 247 (561)
T ss_pred ----eEEecCCC---CCceEEEEccccCCCCcEEEEEEccC-CC--eeeeeeeEeecccEEEEecCCceEEEEEEEeeec
Confidence 12222211 23344 45555544 344555542 22 2233333444322 25999999998887642
Q ss_pred ---CCceeEEEEEEeCCCCCCCCCCCeEecCC-CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCC
Q 008274 231 ---GPLESHLYCAKLYPDWNHTLEAPVKLTNG-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPL 306 (571)
Q Consensus 231 ---~~~~~~l~~~~l~~~g~~~~~~~~~lt~~-~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~ 306 (571)
.-++.+||...+ .+. ..+..-.. .-.+.+.|+|.++.++.+... .|..+..+++..+ ++-..+.+.
T Consensus 248 nKsyfgesnLyl~~~--~e~----~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~--~pa~~s~~~lr~N--l~~~~Pe~~ 317 (561)
T COG5354 248 NKSYFGESNLYLLRI--TER----SIPVEKDLKDPVHDFTWEPLSSRFAVISGY--MPASVSVFDLRGN--LRFYFPEQK 317 (561)
T ss_pred ccceeccceEEEEee--ccc----ccceeccccccceeeeecccCCceeEEecc--cccceeecccccc--eEEecCCcc
Confidence 122477888777 332 11111121 236788999999888776533 5556777776433 332222111
Q ss_pred ChhhhccCCC-CCCeEEEEEcCCCcEEEEEEEcCCC
Q 008274 307 TVPRIKRLQL-EPPDIVQIQANDGTVLYGALYKPDE 341 (571)
Q Consensus 307 ~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~P~~ 341 (571)
... .-+ +..+.+.+..-|+..-...++.|.+
T Consensus 318 rNT----~~fsp~~r~il~agF~nl~gni~i~~~~~ 349 (561)
T COG5354 318 RNT----IFFSPHERYILFAGFDNLQGNIEIFDPAG 349 (561)
T ss_pred ccc----ccccCcccEEEEecCCccccceEEeccCC
Confidence 111 111 2334445555566666666677665
|
|
| >KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.53 Score=45.69 Aligned_cols=54 Identities=20% Similarity=0.156 Sum_probs=37.4
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
..+++.+||||+.|+++..+ ...+|+.++|....-..
T Consensus 188 eV~DL~FS~dgk~lasig~d-------------------------------------~~~VW~~~~g~~~a~~t------ 224 (398)
T KOG0771|consen 188 EVKDLDFSPDGKFLASIGAD-------------------------------------SARVWSVNTGAALARKT------ 224 (398)
T ss_pred ccccceeCCCCcEEEEecCC-------------------------------------ceEEEEeccCchhhhcC------
Confidence 46889999999999998654 24778888874322111
Q ss_pred CCCCCceeEEEEEccCC
Q 008274 104 QNYDEEYLARVNWMHGN 120 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg 120 (571)
..+.++.+....|+.|+
T Consensus 225 ~~~k~~~~~~cRF~~d~ 241 (398)
T KOG0771|consen 225 PFSKDEMFSSCRFSVDN 241 (398)
T ss_pred CcccchhhhhceecccC
Confidence 13456667777888887
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.057 Score=54.43 Aligned_cols=81 Identities=16% Similarity=0.040 Sum_probs=51.8
Q ss_pred chhhhHHHHhCCcEE-----EE-ECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHH
Q 008274 372 VDMRAQYLRSKGILV-----WK-LDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGY 445 (571)
Q Consensus 372 ~~~~~~~l~~~G~~v-----~~-~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~ 445 (571)
|..+++.|.+.||.. .+ +|.|-+.... .. ....+...|+.+.+. ...+|.|+||||||.
T Consensus 67 ~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~~~--------~~----~~~~lk~~ie~~~~~---~~~kv~li~HSmGgl 131 (389)
T PF02450_consen 67 FAKLIENLEKLGYDRGKDLFAAPYDWRLSPAER--------DE----YFTKLKQLIEEAYKK---NGKKVVLIAHSMGGL 131 (389)
T ss_pred HHHHHHHHHhcCcccCCEEEEEeechhhchhhH--------HH----HHHHHHHHHHHHHHh---cCCcEEEEEeCCCch
Confidence 555788899888763 22 5777332200 00 123344555554443 367999999999999
Q ss_pred HHHHHHhcCCC------eeEEEEEcCcc
Q 008274 446 LSAITLARFPD------VFQCAVSGAPV 467 (571)
Q Consensus 446 ~a~~~~~~~~~------~~~~~v~~~~~ 467 (571)
++..++...+. .++..|.+++.
T Consensus 132 ~~~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 132 VARYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHHHHhccchhhHHhhhhEEEEeCCC
Confidence 99998887643 47777777654
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=95.10 E-value=4 Score=40.61 Aligned_cols=176 Identities=10% Similarity=0.059 Sum_probs=95.7
Q ss_pred CCCCceEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee
Q 008274 74 GASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE 153 (571)
Q Consensus 74 g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~ 153 (571)
+...+...|+++-+....++. ++ ....+.+..+.|.|-|++++.+++.. ...||.+.-.+- ...|..++
T Consensus 333 ~ts~td~~i~V~kv~~~~P~~-t~-------~GH~g~V~alk~n~tg~LLaS~SdD~--TlkiWs~~~~~~-~~~l~~Hs 401 (524)
T KOG0273|consen 333 ATSSTDGCIHVCKVGEDRPVK-TF-------IGHHGEVNALKWNPTGSLLASCSDDG--TLKIWSMGQSNS-VHDLQAHS 401 (524)
T ss_pred eecCCCceEEEEEecCCCcce-ee-------ecccCceEEEEECCCCceEEEecCCC--eeEeeecCCCcc-hhhhhhhc
Confidence 333334456666665443321 11 24567889999999999888887654 335665433321 11121111
Q ss_pred ----cCCeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCc-eeeceeecCeEEEEEEEEeecCcEEEEEE
Q 008274 154 ----LDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGT-CLGPITEGDWMVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 154 ----~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~-~~~~lT~~~~~~~~~~~~s~dg~~l~~~~ 227 (571)
.-.|.+.++.-. ...++ .+..+..++. +-++|+..+ .+..|+++.-.|-+.. +||+|+++..-
T Consensus 402 kei~t~~wsp~g~v~~-------n~~~~~~l~sas~dst--V~lwdv~~gv~i~~f~kH~~pVysva-fS~~g~ylAsG- 470 (524)
T KOG0273|consen 402 KEIYTIKWSPTGPVTS-------NPNMNLMLASASFDST--VKLWDVESGVPIHTLMKHQEPVYSVA-FSPNGRYLASG- 470 (524)
T ss_pred cceeeEeecCCCCccC-------CCcCCceEEEeecCCe--EEEEEccCCceeEeeccCCCceEEEE-ecCCCcEEEec-
Confidence 113544332211 11222 3333333333 344554444 4566777776777765 99999877654
Q ss_pred cCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeC
Q 008274 228 TLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 228 ~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~ 280 (571)
+.++. .+++.... +. -.+.....++...+.|+.+|.++...++.
T Consensus 471 s~dg~--V~iws~~~---~~----l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd 514 (524)
T KOG0273|consen 471 SLDGC--VHIWSTKT---GK----LVKSYQGTGGIFELCWNAAGDKLGACASD 514 (524)
T ss_pred CCCCe--eEeccccc---hh----eeEeecCCCeEEEEEEcCCCCEEEEEecC
Confidence 44443 77776654 21 34445555555677899999888766554
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.018 Score=60.24 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHc--C--CCc---CCcEEEEeechHHHHHHHHHhc
Q 008274 416 DQLTGAEWLIKQ--G--LAK---VGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 416 D~~~~~~~l~~~--~--~~d---~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
=+.+|++++.+. + .-+ +..|+++||||||.+|..++..
T Consensus 158 YV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 158 YVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL 202 (973)
T ss_pred HHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh
Confidence 345666666654 1 222 6679999999999999877763
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.95 E-value=1.3 Score=44.32 Aligned_cols=180 Identities=10% Similarity=-0.021 Sum_probs=89.4
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCC--eEEEEEEeccCc---cEEEEEEECCCCce-EEEEEee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGN--ILTAQVLNRSQT---KLKVLKFDIKTGQR-KVILVEE 153 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg--~~i~~~~~r~~~---~~~i~~~d~~~g~~-~~l~~~~ 153 (571)
.+|+++++ ++..-+.... .-....+.++.|||-| ..++++.....+ ...|+.+...+-.. +.+.+-.
T Consensus 152 ~sl~i~e~-t~n~~~~p~~------~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~ 224 (561)
T COG5354 152 SSLYIHEI-TDNIEEHPFK------NLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVS 224 (561)
T ss_pred CeEEEEec-CCccccCchh------hccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeec
Confidence 36788887 5443333221 1123466778999975 366776543322 33566665222111 1222211
Q ss_pred cC--CeeeccCCcccCCCCCccCCCeEEEEE------ecCCc--cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEE
Q 008274 154 LD--SWVNLHDCFTPLDKGVTKYSGGFIWAS------EKTGF--RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQV 223 (571)
Q Consensus 154 ~~--~w~~~~~~~~~~~~~~~~~~d~~~~~s------~~~g~--~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l 223 (571)
+- -|.. .++-+++.. ++.=+ .+||++++.....+..-.-.-.|.++. |+|.++..
T Consensus 225 ~~qLkW~~--------------~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~-W~p~S~~F 289 (561)
T COG5354 225 GVQLKWQV--------------LGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFT-WEPLSSRF 289 (561)
T ss_pred ccEEEEec--------------CCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeee-ecccCCce
Confidence 11 2321 233343332 22223 899999987544332211122466774 99999988
Q ss_pred EEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 224 YFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 224 ~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
..++... ...+...++ .|. .+-.-...-.....|||.++++++. .-.+.-..+.+++.
T Consensus 290 ~vi~g~~---pa~~s~~~l--r~N-----l~~~~Pe~~rNT~~fsp~~r~il~a-gF~nl~gni~i~~~ 347 (561)
T COG5354 290 AVISGYM---PASVSVFDL--RGN-----LRFYFPEQKRNTIFFSPHERYILFA-GFDNLQGNIEIFDP 347 (561)
T ss_pred eEEeccc---ccceeeccc--ccc-----eEEecCCcccccccccCcccEEEEe-cCCccccceEEecc
Confidence 8887322 244444455 332 1111111122345788888877663 23344456666665
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=94.94 E-value=8.1 Score=43.37 Aligned_cols=176 Identities=10% Similarity=0.028 Sum_probs=86.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEcc-CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+.+||+.+++.... + ......+..+.|+| |+.+++...... .|.+.|+.+++...........+.
T Consensus 556 ~v~lWd~~~~~~~~~-~-------~~H~~~V~~l~~~p~~~~~L~Sgs~Dg----~v~iWd~~~~~~~~~~~~~~~v~~- 622 (793)
T PLN00181 556 VVQVWDVARSQLVTE-M-------KEHEKRVWSIDYSSADPTLLASGSDDG----SVKLWSINQGVSIGTIKTKANICC- 622 (793)
T ss_pred eEEEEECCCCeEEEE-e-------cCCCCCEEEEEEcCCCCCEEEEEcCCC----EEEEEECCCCcEEEEEecCCCeEE-
Confidence 578899998765332 2 23456788899997 777666654433 377778888765432221111010
Q ss_pred ccCCcccCCCCCcc-CCCe-EEEEEecCCccEEEEEeCCCce--eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 160 LHDCFTPLDKGVTK-YSGG-FIWASEKTGFRHLYLHDINGTC--LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 160 ~~~~~~~~~~~~~~-~~d~-~~~~s~~~g~~~l~~~~~~~~~--~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
. .+ ++++ +++....+| .|+++|+.... ...+......+..+ .|. +++.|+.. ..++ ..
T Consensus 623 ----v-------~~~~~~g~~latgs~dg--~I~iwD~~~~~~~~~~~~~h~~~V~~v-~f~-~~~~lvs~-s~D~--~i 684 (793)
T PLN00181 623 ----V-------QFPSESGRSLAFGSADH--KVYYYDLRNPKLPLCTMIGHSKTVSYV-RFV-DSSTLVSS-STDN--TL 684 (793)
T ss_pred ----E-------EEeCCCCCEEEEEeCCC--eEEEEECCCCCccceEecCCCCCEEEE-EEe-CCCEEEEE-ECCC--EE
Confidence 0 11 1223 444444455 56777765433 22233223234444 365 56655444 3343 25
Q ss_pred EEEEEEeCCCCCCCCCCCeEecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.+|.+.....+. .......+..-. ....+.+++++++++... .. ..+++++.
T Consensus 685 kiWd~~~~~~~~-~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs-~D---~~v~iw~~ 737 (793)
T PLN00181 685 KLWDLSMSISGI-NETPLHSFMGHTNVKNFVGLSVSDGYIATGS-ET---NEVFVYHK 737 (793)
T ss_pred EEEeCCCCcccc-CCcceEEEcCCCCCeeEEEEcCCCCEEEEEe-CC---CEEEEEEC
Confidence 565543200000 000222333222 233457889887654432 22 25666664
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.59 Score=45.45 Aligned_cols=124 Identities=11% Similarity=0.037 Sum_probs=67.1
Q ss_pred EEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccC
Q 008274 83 GVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHD 162 (571)
Q Consensus 83 ~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~ 162 (571)
.+||+.+|.-... + .+.-..+..+.|||+|-.++..+..+. ..||.+....- ...|-.+.+- -.+.
T Consensus 328 RvWDlRtgr~im~-L-------~gH~k~I~~V~fsPNGy~lATgs~Dnt--~kVWDLR~r~~-ly~ipAH~nl---VS~V 393 (459)
T KOG0272|consen 328 RVWDLRTGRCIMF-L-------AGHIKEILSVAFSPNGYHLATGSSDNT--CKVWDLRMRSE-LYTIPAHSNL---VSQV 393 (459)
T ss_pred heeecccCcEEEE-e-------cccccceeeEeECCCceEEeecCCCCc--EEEeeeccccc-ceecccccch---hhhe
Confidence 6799999875543 3 234567888999999987777655442 23443322211 1112111100 0011
Q ss_pred CcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcC
Q 008274 163 CFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 163 ~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
.|.| ..+.|+.++.-++.-+||.-. .....+.|...+-.|.+.- +++|+..|.-.+-+
T Consensus 394 k~~p-------~~g~fL~TasyD~t~kiWs~~-~~~~~ksLaGHe~kV~s~D-is~d~~~i~t~s~D 451 (459)
T KOG0272|consen 394 KYSP-------QEGYFLVTASYDNTVKIWSTR-TWSPLKSLAGHEGKVISLD-ISPDSQAIATSSFD 451 (459)
T ss_pred Eecc-------cCCeEEEEcccCcceeeecCC-CcccchhhcCCccceEEEE-eccCCceEEEeccC
Confidence 2222 122366666556666666632 3344566666555565554 78888877666543
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.84 E-value=3.4 Score=38.52 Aligned_cols=239 Identities=13% Similarity=0.105 Sum_probs=120.1
Q ss_pred cCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCC-CceEEEeccCC
Q 008274 22 MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG-GPVSWMDLQCG 100 (571)
Q Consensus 22 ~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~-~~~~~~~~~~~ 100 (571)
..+...+-||+|+|+|.=.+.| -.|.+||.-+ .+...+.+.
T Consensus 55 ~~Ki~~~~ws~Dsr~ivSaSqD------------------------------------GklIvWDs~TtnK~haipl~-- 96 (343)
T KOG0286|consen 55 LNKIYAMDWSTDSRRIVSASQD------------------------------------GKLIVWDSFTTNKVHAIPLP-- 96 (343)
T ss_pred ccceeeeEecCCcCeEEeeccC------------------------------------CeEEEEEcccccceeEEecC--
Confidence 4566789999999999765543 1478899776 444445442
Q ss_pred CCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECC--CCceEEEEEeecC--CeeeccCCcccCCCCCccCCC
Q 008274 101 GTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK--TGQRKVILVEELD--SWVNLHDCFTPLDKGVTKYSG 176 (571)
Q Consensus 101 ~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~--~g~~~~l~~~~~~--~w~~~~~~~~~~~~~~~~~~d 176 (571)
-..+-.-++||.|++++-- .-.+.-.||.+..+ .|..+ +.++... +++. -+. ..+|
T Consensus 97 -------s~WVMtCA~sPSg~~VAcG--GLdN~Csiy~ls~~d~~g~~~-v~r~l~gHtgylS------cC~----f~dD 156 (343)
T KOG0286|consen 97 -------SSWVMTCAYSPSGNFVACG--GLDNKCSIYPLSTRDAEGNVR-VSRELAGHTGYLS------CCR----FLDD 156 (343)
T ss_pred -------ceeEEEEEECCCCCeEEec--CcCceeEEEecccccccccce-eeeeecCccceeE------EEE----EcCC
Confidence 2344556899999865532 22233346655543 22222 2222111 2221 111 1123
Q ss_pred eEEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeE
Q 008274 177 GFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVK 255 (571)
Q Consensus 177 ~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~ 255 (571)
.-++++ .|-....+.|+++++. +.+.....++-.+ .++|.....|.++.-+.. ..||-+.- +. -.+-
T Consensus 157 ~~ilT~--SGD~TCalWDie~g~~~~~f~GH~gDV~sl-sl~p~~~ntFvSg~cD~~--aklWD~R~---~~----c~qt 224 (343)
T KOG0286|consen 157 NHILTG--SGDMTCALWDIETGQQTQVFHGHTGDVMSL-SLSPSDGNTFVSGGCDKS--AKLWDVRS---GQ----CVQT 224 (343)
T ss_pred CceEec--CCCceEEEEEcccceEEEEecCCcccEEEE-ecCCCCCCeEEecccccc--eeeeeccC---cc----eeEe
Confidence 333332 2455677788777654 3444445556555 378833345666655542 55554331 21 1112
Q ss_pred ec-CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEcCCCcEEEE
Q 008274 256 LT-NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYG 334 (571)
Q Consensus 256 lt-~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 334 (571)
.. ++...+.+.|-|+|..+ ...+... ...++|+.+..++......+ ....+....+...-++.|-..++..+..
T Consensus 225 F~ghesDINsv~ffP~G~af--atGSDD~--tcRlyDlRaD~~~a~ys~~~-~~~gitSv~FS~SGRlLfagy~d~~c~v 299 (343)
T KOG0286|consen 225 FEGHESDINSVRFFPSGDAF--ATGSDDA--TCRLYDLRADQELAVYSHDS-IICGITSVAFSKSGRLLFAGYDDFTCNV 299 (343)
T ss_pred ecccccccceEEEccCCCee--eecCCCc--eeEEEeecCCcEEeeeccCc-ccCCceeEEEcccccEEEeeecCCceeE
Confidence 22 12234566888998544 3344333 45556777777665544332 2223333444444444444333333444
Q ss_pred E
Q 008274 335 A 335 (571)
Q Consensus 335 ~ 335 (571)
|
T Consensus 300 W 300 (343)
T KOG0286|consen 300 W 300 (343)
T ss_pred e
Confidence 4
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.26 Score=49.99 Aligned_cols=144 Identities=17% Similarity=0.175 Sum_probs=79.4
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc--cchh--hhHHHH------hCCcEEEEECC
Q 008274 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN--TVDM--RAQYLR------SKGILVWKLDN 391 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--~~~~--~~~~l~------~~G~~v~~~d~ 391 (571)
+.+....+..+..|++..... ++..|+||++-|||+.+.+...+.. -+.. -...|. .+--.++.+|.
T Consensus 49 v~v~~~~~~~LFYwf~eS~~~---P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 49 VTVNESEGRQLFYWFFESENN---PETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred EECCCCCCceEEEEEEEccCC---CCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 444445678898888876542 2557999999999998754322210 0000 000111 11134666776
Q ss_pred C-CCCCChhhhHHHHhccCCCCCchhHHHH-HHHHHHcCCCcCCcEEEEeechHHHHHHHHHh----cCC------CeeE
Q 008274 392 R-GTARRGLKFEASIKHNCGRIDAEDQLTG-AEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA----RFP------DVFQ 459 (571)
Q Consensus 392 r-G~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~----~~~------~~~~ 459 (571)
| |.|.+=.. ........-....+|...+ .+|+.+.|.-..+.+.|.|.||+|..+-++|. .+. --++
T Consensus 126 PvGvGFSYs~-~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLk 204 (454)
T KOG1282|consen 126 PVGVGFSYSN-TSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLK 204 (454)
T ss_pred CCcCCccccC-CCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccce
Confidence 6 33322100 0000000111124566555 44666666667788999999999966655543 221 2478
Q ss_pred EEEEcCccCC
Q 008274 460 CAVSGAPVTS 469 (571)
Q Consensus 460 ~~v~~~~~~~ 469 (571)
+.+.+.|+++
T Consensus 205 G~~IGNg~td 214 (454)
T KOG1282|consen 205 GYAIGNGLTD 214 (454)
T ss_pred EEEecCcccC
Confidence 8899998876
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.81 Score=42.83 Aligned_cols=201 Identities=10% Similarity=0.093 Sum_probs=86.5
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEE-eecCCeeeccCCcccCCCCCccCCCeEEEEEecCC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV-EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG 186 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~-~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g 186 (571)
+..+..+.||-|...++.-+..+ .|-+..+.||.|-+-.+ ....+- .+.++ +.++..++- .+
T Consensus 263 d~aVlci~FSRDsEMlAsGsqDG----kIKvWri~tG~ClRrFdrAHtkGv----t~l~F-----SrD~SqiLS----~s 325 (508)
T KOG0275|consen 263 DDAVLCISFSRDSEMLASGSQDG----KIKVWRIETGQCLRRFDRAHTKGV----TCLSF-----SRDNSQILS----AS 325 (508)
T ss_pred ccceEEEeecccHHHhhccCcCC----cEEEEEEecchHHHHhhhhhccCe----eEEEE-----ccCcchhhc----cc
Confidence 44556678888877555433333 25555567777532211 100000 00111 011111221 13
Q ss_pred ccEEEEE-eCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEE
Q 008274 187 FRHLYLH-DINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHV 264 (571)
Q Consensus 187 ~~~l~~~-~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~ 264 (571)
+.+..++ .+.+|+ .+.+-....-+... .+++||.+|.-.+++.. ..+|.... +. -+...+.+..+-...+
T Consensus 326 fD~tvRiHGlKSGK~LKEfrGHsSyvn~a-~ft~dG~~iisaSsDgt---vkvW~~Kt---te-C~~Tfk~~~~d~~vns 397 (508)
T KOG0275|consen 326 FDQTVRIHGLKSGKCLKEFRGHSSYVNEA-TFTDDGHHIISASSDGT---VKVWHGKT---TE-CLSTFKPLGTDYPVNS 397 (508)
T ss_pred ccceEEEeccccchhHHHhcCccccccce-EEcCCCCeEEEecCCcc---EEEecCcc---hh-hhhhccCCCCccccee
Confidence 4444444 344443 23333322233444 48999988877665443 55554321 10 0001111111111233
Q ss_pred EEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCC-CCCeEEEEEcCCCcEEEEEEEc
Q 008274 265 AVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQL-EPPDIVQIQANDGTVLYGALYK 338 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~ 338 (571)
+.+-|....-..+|.. ...+|++++ .|..++......-....+....+ +.-+.+.....|+. +.++.+.
T Consensus 398 v~~~PKnpeh~iVCNr---sntv~imn~-qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~v-lYCF~~~ 467 (508)
T KOG0275|consen 398 VILLPKNPEHFIVCNR---SNTVYIMNM-QGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGV-LYCFSVL 467 (508)
T ss_pred EEEcCCCCceEEEEcC---CCeEEEEec-cceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcE-EEEEEee
Confidence 4444543222223322 236888776 66666665543333333433333 33455555555554 5455444
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.067 Score=46.08 Aligned_cols=37 Identities=22% Similarity=0.141 Sum_probs=26.0
Q ss_pred HHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC
Q 008274 417 QLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP 455 (571)
Q Consensus 417 ~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~ 455 (571)
+...++....+ ....+|.++|||+||.+|..++....
T Consensus 14 i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 14 VLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred HHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 44444444332 14578999999999999998887653
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.61 E-value=11 Score=43.46 Aligned_cols=121 Identities=7% Similarity=0.088 Sum_probs=63.0
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCC--eeecc----CCcccCCCCCccCC-CeEEEEEec
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS--WVNLH----DCFTPLDKGVTKYS-GGFIWASEK 184 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~--w~~~~----~~~~~~~~~~~~~~-d~~~~~s~~ 184 (571)
..+++.+++..++++ +..+ ..|.++|..++..+.+......+ +.... ..+. .+.....++ ++.+++++.
T Consensus 627 ~GIavd~~gn~LYVa-Dt~n--~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln-~P~gVa~dp~~g~LyVad~ 702 (1057)
T PLN02919 627 QGLAYNAKKNLLYVA-DTEN--HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLN-SPWDVCFEPVNEKVYIAMA 702 (1057)
T ss_pred cEEEEeCCCCEEEEE-eCCC--ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcC-CCeEEEEecCCCeEEEEEC
Confidence 457888887654443 3332 24888999998877664321000 00000 0000 011112344 445555543
Q ss_pred CCccEEEEEeCCCceeeceeecC--------------e-EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 185 TGFRHLYLHDINGTCLGPITEGD--------------W-MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~--------------~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
+...|++++..++....+.... + ....+ .++++|+.||++.... ..|.++++
T Consensus 703 -~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GI-avspdG~~LYVADs~n----~~Irv~D~ 769 (1057)
T PLN02919 703 -GQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGI-SLSPDLKELYIADSES----SSIRALDL 769 (1057)
T ss_pred -CCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEE-EEeCCCCEEEEEECCC----CeEEEEEC
Confidence 4456888887666544332110 0 01123 4899999998876544 45666666
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=94.51 E-value=1.4 Score=42.13 Aligned_cols=119 Identities=14% Similarity=0.110 Sum_probs=69.8
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee--cCCeee
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE--LDSWVN 159 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~--~~~w~~ 159 (571)
-++|++.+|+. ...+ ++....+....||.||.+++.-.-. . +|.+....+|..+.....+ +-.|..
T Consensus 88 AflW~~~~ge~-~~el-------tgHKDSVt~~~FshdgtlLATGdms--G--~v~v~~~stg~~~~~~~~e~~dieWl~ 155 (399)
T KOG0296|consen 88 AFLWDISTGEF-AGEL-------TGHKDSVTCCSFSHDGTLLATGDMS--G--KVLVFKVSTGGEQWKLDQEVEDIEWLK 155 (399)
T ss_pred EEEEEccCCcc-eeEe-------cCCCCceEEEEEccCceEEEecCCC--c--cEEEEEcccCceEEEeecccCceEEEE
Confidence 47899998872 2222 4566788999999999877764222 2 3777777877765433222 224652
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
|.|.. +++.-..+|- +|++.+.++. .+.+......+.. -.+.|||+.++....
T Consensus 156 -------------WHp~a~illAG~~DGs--vWmw~ip~~~~~kv~~Gh~~~ct~-G~f~pdGKr~~tgy~ 210 (399)
T KOG0296|consen 156 -------------WHPRAHILLAGSTDGS--VWMWQIPSQALCKVMSGHNSPCTC-GEFIPDGKRILTGYD 210 (399)
T ss_pred -------------ecccccEEEeecCCCc--EEEEECCCcceeeEecCCCCCccc-ccccCCCceEEEEec
Confidence 44443 5555555663 5555555533 3333332322222 237889998877766
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.19 Score=46.80 Aligned_cols=119 Identities=15% Similarity=0.205 Sum_probs=74.2
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCe-eeccCCcccCCCCCccCCCeEEEEEe
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW-VNLHDCFTPLDKGVTKYSGGFIWASE 183 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w-~~~~~~~~~~~~~~~~~~d~~~~~s~ 183 (571)
.+...|+..+.|++||..|+.++.... |-+.+.++++|..-.+...... ++. .-+.+ .++..|++ .+
T Consensus 345 rGHsSyvn~a~ft~dG~~iisaSsDgt----vkvW~~KtteC~~Tfk~~~~d~~vns---v~~~P----Knpeh~iV-CN 412 (508)
T KOG0275|consen 345 RGHSSYVNEATFTDDGHHIISASSDGT----VKVWHGKTTECLSTFKPLGTDYPVNS---VILLP----KNPEHFIV-CN 412 (508)
T ss_pred cCccccccceEEcCCCCeEEEecCCcc----EEEecCcchhhhhhccCCCCccccee---EEEcC----CCCceEEE-Ec
Confidence 445668889999999998887766553 6677888888754333221111 000 01111 12334444 34
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEE--EEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQI--VGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
+ -..+|+++..|.-.+-+++|..+-.++ ...||.|.++|..+.+ .-+|.+..
T Consensus 413 r--sntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED-----~vlYCF~~ 466 (508)
T KOG0275|consen 413 R--SNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGED-----GVLYCFSV 466 (508)
T ss_pred C--CCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccC-----cEEEEEEe
Confidence 4 346899999998888888875443222 2489999999999743 45666665
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.39 Score=46.47 Aligned_cols=99 Identities=10% Similarity=0.065 Sum_probs=55.1
Q ss_pred EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec
Q 008274 178 FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT 257 (571)
Q Consensus 178 ~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt 257 (571)
|+-. ..+|.-.||-.- -..+.++|+...|++..+- |.|.. .|++++..++. ..++ |.. .| .||.
T Consensus 195 F~t~-SdDg~ikiWdf~-~~kee~vL~GHgwdVksvd-WHP~k-gLiasgskDnl--VKlW--Dpr-Sg-------~cl~ 258 (464)
T KOG0284|consen 195 FLTC-SDDGTIKIWDFR-MPKEERVLRGHGWDVKSVD-WHPTK-GLIASGSKDNL--VKLW--DPR-SG-------SCLA 258 (464)
T ss_pred eEEe-cCCCeEEEEecc-CCchhheeccCCCCcceec-cCCcc-ceeEEccCCce--eEee--cCC-Cc-------chhh
Confidence 4433 444554555432 3455678887889998875 88754 47777766653 3333 331 12 2433
Q ss_pred CC----CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 258 NG----KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 258 ~~----~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
.. ...-.+.|++++.+++-.. . .. .+.++|..+-+
T Consensus 259 tlh~HKntVl~~~f~~n~N~Llt~s-k-D~--~~kv~DiR~mk 297 (464)
T KOG0284|consen 259 TLHGHKNTVLAVKFNPNGNWLLTGS-K-DQ--SCKVFDIRTMK 297 (464)
T ss_pred hhhhccceEEEEEEcCCCCeeEEcc-C-Cc--eEEEEehhHhH
Confidence 22 1233458999998775532 2 22 55666664333
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.41 E-value=4.3 Score=37.85 Aligned_cols=166 Identities=15% Similarity=0.187 Sum_probs=87.2
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEec
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK 184 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~ 184 (571)
.....|++.-.|.+|+. |+..+. .....+-|+++|+..+........-... .+.| + +++.|+--+ -
T Consensus 142 ~gHtgylScC~f~dD~~-ilT~SG----D~TCalWDie~g~~~~~f~GH~gDV~sl--sl~p-----~-~~ntFvSg~-c 207 (343)
T KOG0286|consen 142 AGHTGYLSCCRFLDDNH-ILTGSG----DMTCALWDIETGQQTQVFHGHTGDVMSL--SLSP-----S-DGNTFVSGG-C 207 (343)
T ss_pred cCccceeEEEEEcCCCc-eEecCC----CceEEEEEcccceEEEEecCCcccEEEE--ecCC-----C-CCCeEEecc-c
Confidence 45678999999999885 343332 2348888999998766554322211100 0111 1 223333211 1
Q ss_pred CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC---CCc
Q 008274 185 TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN---GKG 261 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~---~~g 261 (571)
+....||=+. ++...+-+...+.++..+ .|.|+|.. +.++.+++ .-.+|-+.. +- +...... ..|
T Consensus 208 D~~aklWD~R-~~~c~qtF~ghesDINsv-~ffP~G~a-fatGSDD~--tcRlyDlRa--D~-----~~a~ys~~~~~~g 275 (343)
T KOG0286|consen 208 DKSAKLWDVR-SGQCVQTFEGHESDINSV-RFFPSGDA-FATGSDDA--TCRLYDLRA--DQ-----ELAVYSHDSIICG 275 (343)
T ss_pred ccceeeeecc-CcceeEeecccccccceE-EEccCCCe-eeecCCCc--eeEEEeecC--Cc-----EEeeeccCcccCC
Confidence 3344444332 334445555556566665 48888853 33444444 366665443 21 1222222 135
Q ss_pred eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 262 KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 262 ~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
..++.||.+|+.+..-+... ...+.|...++.+-.
T Consensus 276 itSv~FS~SGRlLfagy~d~----~c~vWDtlk~e~vg~ 310 (343)
T KOG0286|consen 276 ITSVAFSKSGRLLFAGYDDF----TCNVWDTLKGERVGV 310 (343)
T ss_pred ceeEEEcccccEEEeeecCC----ceeEeeccccceEEE
Confidence 67789999998775545443 456666555554333
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.079 Score=44.76 Aligned_cols=53 Identities=25% Similarity=0.307 Sum_probs=34.6
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc---C----CCeeEEEEEcCccC
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR---F----PDVFQCAVSGAPVT 468 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~---~----~~~~~~~v~~~~~~ 468 (571)
...+.+.++.+.++.. ..+|.+.|||+||.+|..++.. + +..+.+....+|-.
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 3456666666665532 4789999999999999888764 1 14566666666654
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=94.37 E-value=3.7 Score=39.90 Aligned_cols=105 Identities=12% Similarity=0.147 Sum_probs=63.8
Q ss_pred eEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCC-CCCCc---------cccc--------CCCCCCCCceEEEEEEECC
Q 008274 27 GYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSV-GSEAQ---------EDHA--------YPFAGASNVKVRLGVVSAA 88 (571)
Q Consensus 27 ~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~--------y~~~g~~~~~~~l~~~dl~ 88 (571)
++.|.|=...++-...++..+..+.++..+--.. .++.. -.+. ....|..| .+.+||+.
T Consensus 86 Di~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn---~v~iWnv~ 162 (472)
T KOG0303|consen 86 DIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN---TVSIWNVG 162 (472)
T ss_pred ccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc---eEEEEecc
Confidence 3568888887766556666555555544322210 00000 0001 12234444 68999999
Q ss_pred CCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 89 GGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
+|+.. +++ +....+.+++|+-||.+++...... .|-++|..+|+..
T Consensus 163 tgeal-i~l--------~hpd~i~S~sfn~dGs~l~TtckDK----kvRv~dpr~~~~v 208 (472)
T KOG0303|consen 163 TGEAL-ITL--------DHPDMVYSMSFNRDGSLLCTTCKDK----KVRVIDPRRGTVV 208 (472)
T ss_pred CCcee-eec--------CCCCeEEEEEeccCCceeeeecccc----eeEEEcCCCCcEe
Confidence 99853 333 2566788899999999888775443 4888999998753
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=94.28 E-value=1.4 Score=46.33 Aligned_cols=158 Identities=10% Similarity=0.045 Sum_probs=78.5
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-Ceeec
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVNL 160 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~~ 160 (571)
+.+|++.+...... . .+....+..+.|+|-|-+.+.. ..++ ...+|.+|-. ...|....+..+ ...
T Consensus 475 vRLWsl~t~s~~V~-y-------~GH~~PVwdV~F~P~GyYFata-s~D~-tArLWs~d~~-~PlRifaghlsDV~cv-- 541 (707)
T KOG0263|consen 475 VRLWSLDTWSCLVI-Y-------KGHLAPVWDVQFAPRGYYFATA-SHDQ-TARLWSTDHN-KPLRIFAGHLSDVDCV-- 541 (707)
T ss_pred eeeeecccceeEEE-e-------cCCCcceeeEEecCCceEEEec-CCCc-eeeeeecccC-CchhhhcccccccceE--
Confidence 45667776544333 1 2344567778899998655554 3342 4478877762 222222222111 111
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCc-eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGT-CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~-~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.| .|+. ++++-..+-. +.+.|...| ..+..+.....+.... +||+|++|.--+. ++ ...+|
T Consensus 542 --~F---------HPNs~Y~aTGSsD~t--VRlWDv~~G~~VRiF~GH~~~V~al~-~Sp~Gr~LaSg~e-d~--~I~iW 604 (707)
T KOG0263|consen 542 --SF---------HPNSNYVATGSSDRT--VRLWDVSTGNSVRIFTGHKGPVTALA-FSPCGRYLASGDE-DG--LIKIW 604 (707)
T ss_pred --EE---------CCcccccccCCCCce--EEEEEcCCCcEEEEecCCCCceEEEE-EcCCCceEeeccc-CC--cEEEE
Confidence 12 2333 3333222223 334444444 4555666565666664 9999976654432 32 24554
Q ss_pred EEEeCCCCCCCCCCCeEec-CCCceEEEEECCCCCEEEE
Q 008274 239 CAKLYPDWNHTLEAPVKLT-NGKGKHVAVLDHNMRNFVD 276 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt-~~~g~~~~~~s~~g~~~v~ 276 (571)
++. .|. ...++- +.....+.+||.||..+|-
T Consensus 605 --Dl~-~~~----~v~~l~~Ht~ti~SlsFS~dg~vLas 636 (707)
T KOG0263|consen 605 --DLA-NGS----LVKQLKGHTGTIYSLSFSRDGNVLAS 636 (707)
T ss_pred --EcC-CCc----chhhhhcccCceeEEEEecCCCEEEe
Confidence 452 222 122221 2223456799999986654
|
|
| >KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown] | Back alignment and domain information |
|---|
Probab=94.26 E-value=2.1 Score=39.74 Aligned_cols=154 Identities=10% Similarity=0.096 Sum_probs=77.8
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
++.+-+.|-||++++|-+.. . .|-+++++.+..+.-.+....
T Consensus 124 g~i~cvew~Pns~klasm~d--n-----------------------------------~i~l~~l~ess~~vaev~ss~- 165 (370)
T KOG1007|consen 124 GKINCVEWEPNSDKLASMDD--N-----------------------------------NIVLWSLDESSKIVAEVLSSE- 165 (370)
T ss_pred CceeeEEEcCCCCeeEEecc--C-----------------------------------ceEEEEcccCcchheeecccc-
Confidence 34466789999999987542 1 356677776554211111000
Q ss_pred CCCCCCceeEEEEEcc--CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--E
Q 008274 103 DQNYDEEYLARVNWMH--GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--F 178 (571)
Q Consensus 103 ~~~~~~~~~~~~~wsp--Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~ 178 (571)
+ ..+...+..-+||| ||..++...++. |.-+|+.|.....-.+...+.- .+.+ ...|+. +
T Consensus 166 s-~e~~~~ftsg~WspHHdgnqv~tt~d~t-----l~~~D~RT~~~~~sI~dAHgq~------vrdl----DfNpnkq~~ 229 (370)
T KOG1007|consen 166 S-AEMRHSFTSGAWSPHHDGNQVATTSDST-----LQFWDLRTMKKNNSIEDAHGQR------VRDL----DFNPNKQHI 229 (370)
T ss_pred c-ccccceecccccCCCCccceEEEeCCCc-----EEEEEccchhhhcchhhhhcce------eeec----cCCCCceEE
Confidence 0 12345667779999 787777765544 6666666543221111110000 0111 123443 5
Q ss_pred EEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCC
Q 008274 179 IWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDG 231 (571)
Q Consensus 179 ~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~ 231 (571)
+....++|+-+||=........+.|....--+.. +.+.|--++|+.++..+.
T Consensus 230 lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~-VRfn~~hdqLiLs~~SDs 281 (370)
T KOG1007|consen 230 LVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWA-VRFNPEHDQLILSGGSDS 281 (370)
T ss_pred EEEcCCCccEEEEeccCCCccccccCCCceEEEE-EEecCccceEEEecCCCc
Confidence 5556668887777654333223334333222222 235666666666665443
|
|
| >KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=94.20 E-value=6.2 Score=40.20 Aligned_cols=141 Identities=11% Similarity=0.119 Sum_probs=78.7
Q ss_pred EEEEEccCCe-EEEEE-EeccC------ccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEE
Q 008274 112 ARVNWMHGNI-LTAQV-LNRSQ------TKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWA 181 (571)
Q Consensus 112 ~~~~wspDg~-~i~~~-~~r~~------~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~ 181 (571)
....|.+-|. +|+.. ++-+. .+..||.++++ |+...+--...+.-.+ . .|++++ |.++
T Consensus 221 vqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~-g~s~~V~L~k~GPVhd------v-----~W~~s~~EF~Vv 288 (566)
T KOG2315|consen 221 VQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQ-GESVSVPLLKEGPVHD------V-----TWSPSGREFAVV 288 (566)
T ss_pred eEEEeccCCceEEEEEEEeecCCCccccccceEEEEEec-CceEEEecCCCCCceE------E-----EECCCCCEEEEE
Confidence 4578999998 44443 23222 25579999999 4433221111110001 1 233433 4433
Q ss_pred EecCCc--cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC
Q 008274 182 SEKTGF--RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG 259 (571)
Q Consensus 182 s~~~g~--~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~ 259 (571)
- |+ ..+-++++.+.-.-.+..|..+ ...|+|-|+.|++.+-.+-++...++-+.- .++++..
T Consensus 289 y---GfMPAkvtifnlr~~~v~df~egpRN---~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n----------~K~i~~~ 352 (566)
T KOG2315|consen 289 Y---GFMPAKVTIFNLRGKPVFDFPEGPRN---TAFFNPHGNIILLAGFGNLPGDMEVWDVPN----------RKLIAKF 352 (566)
T ss_pred E---ecccceEEEEcCCCCEeEeCCCCCcc---ceEECCCCCEEEEeecCCCCCceEEEeccc----------hhhcccc
Confidence 2 32 4566777777655555555432 224999999999998766554566654431 1233322
Q ss_pred --CceEEEEECCCCCEEEEEeeC
Q 008274 260 --KGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 260 --~g~~~~~~s~~g~~~v~~~s~ 280 (571)
.+...+.|+|||.+++-...+
T Consensus 353 ~a~~tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 353 KAANTTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred ccCCceEEEEcCCCcEEEEEecc
Confidence 234556999999998765433
|
|
| >KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.28 Score=46.02 Aligned_cols=73 Identities=15% Similarity=0.163 Sum_probs=49.6
Q ss_pred cceeeeec--cCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCc
Q 008274 14 AEYIAQEE--MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP 91 (571)
Q Consensus 14 ~~~~~~~~--~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~ 91 (571)
|+|.-.=+ -+......||||||.|.-++.- . .+|-+|++.+.+
T Consensus 81 pew~ckIdeg~agls~~~WSPdgrhiL~tseF--~---------------------------------lriTVWSL~t~~ 125 (447)
T KOG4497|consen 81 PEWYCKIDEGQAGLSSISWSPDGRHILLTSEF--D---------------------------------LRITVWSLNTQK 125 (447)
T ss_pred ceeEEEeccCCCcceeeeECCCcceEeeeecc--e---------------------------------eEEEEEEeccce
Confidence 56655332 2456788999999998664421 1 256788888877
Q ss_pred eEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc
Q 008274 92 VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS 130 (571)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~ 130 (571)
...+... ...+-.+++.|||++.+..+.|+
T Consensus 126 ~~~~~~p---------K~~~kg~~f~~dg~f~ai~sRrD 155 (447)
T KOG4497|consen 126 GYLLPHP---------KTNVKGYAFHPDGQFCAILSRRD 155 (447)
T ss_pred eEEeccc---------ccCceeEEECCCCceeeeeeccc
Confidence 7666432 22335679999999988887775
|
|
| >KOG1539 consensus WD repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.25 Score=52.07 Aligned_cols=63 Identities=16% Similarity=0.134 Sum_probs=46.6
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.+..++.+|||||+|+-++.| ..|.+||+-++.....-.
T Consensus 577 nritd~~FS~DgrWlisasmD------------------------------------~tIr~wDlpt~~lID~~~----- 615 (910)
T KOG1539|consen 577 NRITDMTFSPDGRWLISASMD------------------------------------STIRTWDLPTGTLIDGLL----- 615 (910)
T ss_pred cceeeeEeCCCCcEEEEeecC------------------------------------CcEEEEeccCcceeeeEe-----
Confidence 356789999999999887665 246889999987654322
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccC
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQ 131 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~ 131 (571)
-+....++++||.|.+++.+ +.++
T Consensus 616 ----vd~~~~sls~SPngD~LAT~-Hvd~ 639 (910)
T KOG1539|consen 616 ----VDSPCTSLSFSPNGDFLATV-HVDQ 639 (910)
T ss_pred ----cCCcceeeEECCCCCEEEEE-EecC
Confidence 34556678999999988876 4443
|
|
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=94.13 E-value=3.8 Score=41.93 Aligned_cols=184 Identities=11% Similarity=0.028 Sum_probs=91.7
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE-EEEEeecCCee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK-VILVEELDSWV 158 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~-~l~~~~~~~w~ 158 (571)
..+|+|+..+++++.+.- . ...+++.+.|+++|+.|+.-...+ .|.+.|.+..+.. .+.......+.
T Consensus 197 ~~vylW~~~s~~v~~l~~-------~-~~~~vtSv~ws~~G~~LavG~~~g----~v~iwD~~~~k~~~~~~~~h~~rvg 264 (484)
T KOG0305|consen 197 QSVYLWSASSGSVTELCS-------F-GEELVTSVKWSPDGSHLAVGTSDG----TVQIWDVKEQKKTRTLRGSHASRVG 264 (484)
T ss_pred ceEEEEecCCCceEEeEe-------c-CCCceEEEEECCCCCEEEEeecCC----eEEEEehhhccccccccCCcCceeE
Confidence 468999999999877743 1 267899999999999888765544 3788888764432 22221111111
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
. ++|.. ..+..-.++|....+-+.......+.+....-+|.... |++|++++.=-++++ .++
T Consensus 265 ~-----------laW~~-~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLk-ws~d~~~lASGgnDN-----~~~ 326 (484)
T KOG0305|consen 265 S-----------LAWNS-SVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLK-WSPDGNQLASGGNDN-----VVF 326 (484)
T ss_pred E-----------EeccC-ceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeE-ECCCCCeeccCCCcc-----ceE
Confidence 0 12332 22222333443222222222111121333445677764 999997654433332 334
Q ss_pred EEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeE
Q 008274 239 CAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVL 299 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~ 299 (571)
..+. .... ....++. ...+-..+|+|=-.-++.+..+ +.=..|...+..+++.+.
T Consensus 327 Iwd~--~~~~---p~~~~~~H~aAVKA~awcP~q~~lLAsGGG-s~D~~i~fwn~~~g~~i~ 382 (484)
T KOG0305|consen 327 IWDG--LSPE---PKFTFTEHTAAVKALAWCPWQSGLLATGGG-SADRCIKFWNTNTGARID 382 (484)
T ss_pred eccC--CCcc---ccEEEeccceeeeEeeeCCCccCceEEcCC-CcccEEEEEEcCCCcEec
Confidence 4443 2211 2233333 2233445788844444443322 222244444554555433
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=93.90 E-value=4.7 Score=40.83 Aligned_cols=115 Identities=12% Similarity=0.083 Sum_probs=70.1
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEE-EECCCCCCCC---hh-hh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVW-KLDNRGTARR---GL-KF 401 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~-~~d~rG~~~~---~~-~~ 401 (571)
+.+.++ .+.+-|-+ -|.|+.|++-|.-.. +.|.. .-++...|.-.+ .-|.|-.||. |. ++
T Consensus 273 ~~reEi-~yYFnPGD-----~KPPL~VYFSGyR~a----EGFEg-----y~MMk~Lg~PfLL~~DpRleGGaFYlGs~ey 337 (511)
T TIGR03712 273 SKRQEF-IYYFNPGD-----FKPPLNVYFSGYRPA----EGFEG-----YFMMKRLGAPFLLIGDPRLEGGAFYLGSDEY 337 (511)
T ss_pred CCCCee-EEecCCcC-----CCCCeEEeeccCccc----Ccchh-----HHHHHhcCCCeEEeeccccccceeeeCcHHH
Confidence 345555 33456655 355999999884322 22221 234556676554 4488855543 22 12
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 402 EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 402 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
+. .+++.|+...+.-..+.+.+.+-|.|||-+-|+.+++.... +|+|..=|++++
T Consensus 338 E~------------~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P--~AIiVgKPL~NL 392 (511)
T TIGR03712 338 EQ------------GIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSP--HAIIVGKPLVNL 392 (511)
T ss_pred HH------------HHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCC--ceEEEcCcccch
Confidence 21 23444444444324578899999999999999999987432 678888888765
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.1 Score=49.78 Aligned_cols=118 Identities=14% Similarity=0.062 Sum_probs=74.6
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc--------cccchhhhhhcCCCC-------CC---hhh
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD--------GYDTFYTEKYMGLPS-------ED---PVG 491 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~~g~~~-------~~---~~~ 491 (571)
..-++..|.|.|--|..+...|...|..++.+-...-+.+.+ .|...|...+..... +. ...
T Consensus 231 ~~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL 310 (507)
T COG4287 231 VEIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQL 310 (507)
T ss_pred eeeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHH
Confidence 466789999999999999998887776543322222222211 111111111100000 01 112
Q ss_pred hccCCcchhh-----ccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 492 YEYSSVMHHV-----HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 492 ~~~~s~~~~~-----~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
..-.+|+... .++..|-.|+.|..|+...+.++..+++.| .....+++.|+..|..
T Consensus 311 ~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~L---PG~kaLrmvPN~~H~~ 371 (507)
T COG4287 311 LEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDL---PGEKALRMVPNDPHNL 371 (507)
T ss_pred HHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccC---CCceeeeeCCCCcchh
Confidence 2234565554 566779999999999999999998888887 5567788999999986
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.64 E-value=1.5 Score=42.70 Aligned_cols=65 Identities=12% Similarity=0.062 Sum_probs=57.8
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.+-+.+..|.++|..+-+++.+..+.+|..++..-+.++.|............+.+.+|+++.
T Consensus 226 ~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 226 WNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred ccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 46677779999999999999999999999999999999999998766777888999999999864
|
|
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=93.46 E-value=2.7 Score=42.20 Aligned_cols=195 Identities=11% Similarity=0.046 Sum_probs=90.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCC-CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNY-DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+.+||+.+-....-.+. .|.+ ..+.+....||+-|..|+.++...| .-++|-++-+.....+. +.++-
T Consensus 190 ~v~~wDf~gMdas~~~fr----~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aq----akl~DRdG~~~~e~~KG--DQYI~ 259 (641)
T KOG0772|consen 190 TVKFWDFQGMDASMRSFR----QLQPCETHQINSLQYSVTGDQILVVSGSAQ----AKLLDRDGFEIVEFSKG--DQYIR 259 (641)
T ss_pred eEEEEecccccccchhhh----ccCcccccccceeeecCCCCeEEEEecCcc----eeEEccCCceeeeeecc--chhhh
Confidence 578899886332111010 1112 3467778899999987766655443 55566665443221111 00000
Q ss_pred c----cCCcccCCCCCccCCC--eEEEEEecCCccEEEEEeCCCceeece-ee---cC-eEEEEEEEEeecCcEEEEEEc
Q 008274 160 L----HDCFTPLDKGVTKYSG--GFIWASEKTGFRHLYLHDINGTCLGPI-TE---GD-WMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 160 ~----~~~~~~~~~~~~~~~d--~~~~~s~~~g~~~l~~~~~~~~~~~~l-T~---~~-~~~~~~~~~s~dg~~l~~~~~ 228 (571)
+ .....-+.-+ .|.|+ ..++++..+|--.||-++-...+.+.+ |. +. -.+..+ .|++||+.| ..+.
T Consensus 260 Dm~nTKGHia~lt~g-~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC-~~nrdg~~i-Aagc 336 (641)
T KOG0772|consen 260 DMYNTKGHIAELTCG-CWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSC-AWNRDGKLI-AAGC 336 (641)
T ss_pred hhhccCCceeeeecc-ccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceee-ecCCCcchh-hhcc
Confidence 0 0000000000 22232 344455556777777776433333222 22 22 223445 499999873 3444
Q ss_pred CCCCceeEEEEEEeCCCCCCCCCCCeEe-cCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 229 LDGPLESHLYCAKLYPDWNHTLEAPVKL-TNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 229 ~~~~~~~~l~~~~l~~~g~~~~~~~~~l-t~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
.+|. .|+|...- .+..+...++.- ..+.+..+++||.||++|+- .+... .+-+.++..-+
T Consensus 337 ~DGS--IQ~W~~~~--~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlS-Rg~D~---tLKvWDLrq~k 397 (641)
T KOG0772|consen 337 LDGS--IQIWDKGS--RTVRPVMKVKDAHLPGQDITSISFSYDGNYLLS-RGFDD---TLKVWDLRQFK 397 (641)
T ss_pred cCCc--eeeeecCC--cccccceEeeeccCCCCceeEEEeccccchhhh-ccCCC---ceeeeeccccc
Confidence 4543 66665311 111110011111 11224556799999987743 22222 45555665444
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=93.41 E-value=6.7 Score=36.57 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=26.6
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 149 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l 149 (571)
....++||||+..+|+....+. |..+|+.+.+.-.|
T Consensus 45 QWRkl~WSpD~tlLa~a~S~G~----i~vfdl~g~~lf~I 80 (282)
T PF15492_consen 45 QWRKLAWSPDCTLLAYAESTGT----IRVFDLMGSELFVI 80 (282)
T ss_pred hheEEEECCCCcEEEEEcCCCe----EEEEecccceeEEc
Confidence 3445799999999998865553 77788888666555
|
|
| >KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown] | Back alignment and domain information |
|---|
Probab=93.39 E-value=5.8 Score=37.04 Aligned_cols=141 Identities=13% Similarity=0.112 Sum_probs=73.5
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEE---EEeec
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVI---LVEEL 154 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l---~~~~~ 154 (571)
+++|.-.|.++++...... ++......-+.|.||.+ ..--..--..+..+||+++.+.++.... .....
T Consensus 74 kvqiv~ld~~s~e~~~~a~-------fd~~YP~tK~~wiPd~~g~~pdlLATs~D~LRlWri~~ee~~~~~~~~L~~~kn 146 (364)
T KOG0290|consen 74 KVQIVQLDEDSGELVEDAN-------FDHPYPVTKLMWIPDSKGVYPDLLATSSDFLRLWRIGDEESRVELQSVLNNNKN 146 (364)
T ss_pred eeEEEEEccCCCceeccCC-------CCCCCCccceEecCCccccCcchhhcccCeEEEEeccCcCCceehhhhhccCcc
Confidence 3566667777777654422 34556677789999975 2111111122455799999876654421 11111
Q ss_pred CCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeC--CCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 155 DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDI--NGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 155 ~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~--~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
..+-..-..|.+.. -++. ++-+|.-+-.=-||-+.. .+.-.+||.-.+.+|.++. |..++..+|.+...+|.
T Consensus 147 s~~~aPlTSFDWne----~dp~-~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIa-f~~~s~~~FASvgaDGS 220 (364)
T KOG0290|consen 147 SEFCAPLTSFDWNE----VDPN-LIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIA-FLKGSRDVFASVGADGS 220 (364)
T ss_pred cccCCccccccccc----CCcc-eeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEE-eccCccceEEEecCCCc
Confidence 11111111122211 1222 443443332223333332 2223577777777888886 88888888888777764
|
|
| >KOG1274 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.38 E-value=2.1 Score=46.02 Aligned_cols=55 Identities=7% Similarity=0.049 Sum_probs=38.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
.|-+.+++.+...... .+.+..+..+.+.|.|.++|..+-.++ ++.+|+++|...
T Consensus 119 ~vK~~~~~D~s~~~~l--------rgh~apVl~l~~~p~~~fLAvss~dG~----v~iw~~~~~~~~ 173 (933)
T KOG1274|consen 119 AVKLLNLDDSSQEKVL--------RGHDAPVLQLSYDPKGNFLAVSSCDGK----VQIWDLQDGILS 173 (933)
T ss_pred eEEEEeccccchheee--------cccCCceeeeeEcCCCCEEEEEecCce----EEEEEcccchhh
Confidence 4566666653322221 346778889999999999988876653 888899988753
|
|
| >KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown] | Back alignment and domain information |
|---|
Probab=93.27 E-value=2.4 Score=42.51 Aligned_cols=61 Identities=18% Similarity=0.207 Sum_probs=37.7
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
.+.+.+||||.+||..+.|.. ..||.+|..+.+..++..-
T Consensus 450 ls~v~ysp~G~~lAvgs~d~~----------------------------------iyiy~Vs~~g~~y~r~~k~------ 489 (626)
T KOG2106|consen 450 LSVVRYSPDGAFLAVGSHDNH----------------------------------IYIYRVSANGRKYSRVGKC------ 489 (626)
T ss_pred eEEEEEcCCCCEEEEecCCCe----------------------------------EEEEEECCCCcEEEEeeee------
Confidence 567889999999988654411 1234444444444443221
Q ss_pred CCCCceeEEEEEccCCeEEEEEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVL 127 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~ 127 (571)
...++....||+|++++...+
T Consensus 490 --~gs~ithLDwS~Ds~~~~~~S 510 (626)
T KOG2106|consen 490 --SGSPITHLDWSSDSQFLVSNS 510 (626)
T ss_pred --cCceeEEeeecCCCceEEecc
Confidence 126788899999998765543
|
|
| >KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.16 E-value=8 Score=36.71 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=37.9
Q ss_pred EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec-CCCceEEEEECCCCCEEEEEeeCCCCCCEE
Q 008274 209 MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-NGKGKHVAVLDHNMRNFVDFHDSLDSPPRI 287 (571)
Q Consensus 209 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt-~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l 287 (571)
-+... .|-+||+.|| ++.+.. ..|-..++..... ++-...+-. +.+...-+...|+|.+++ +..+-..+
T Consensus 252 GvThL-~~~edGn~lf-sGaRk~---dkIl~WDiR~~~~-pv~~L~rhv~~TNQRI~FDld~~~~~La----sG~tdG~V 321 (406)
T KOG2919|consen 252 GVTHL-QWCEDGNKLF-SGARKD---DKILCWDIRYSRD-PVYALERHVGDTNQRILFDLDPKGEILA----SGDTDGSV 321 (406)
T ss_pred CeeeE-EeccCcCeec-ccccCC---CeEEEEeehhccc-hhhhhhhhccCccceEEEecCCCCceee----ccCCCccE
Confidence 34444 4999999665 444443 3455555521110 111111211 123344457778887663 22344467
Q ss_pred EEEEcCC
Q 008274 288 LLCSLQD 294 (571)
Q Consensus 288 ~~~~~~~ 294 (571)
.+.++++
T Consensus 322 ~vwdlk~ 328 (406)
T KOG2919|consen 322 RVWDLKD 328 (406)
T ss_pred EEEecCC
Confidence 7777765
|
|
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.11 E-value=2.4 Score=38.58 Aligned_cols=131 Identities=15% Similarity=0.089 Sum_probs=73.4
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.+||..+|+.++- ++ ....+.....++||++|...-.+. |.-.|+++=..-.-.+.+-+ ++
T Consensus 166 tVRLWD~rTgt~v~s-L~--------~~s~VtSlEvs~dG~ilTia~gss-----V~Fwdaksf~~lKs~k~P~n--V~- 228 (334)
T KOG0278|consen 166 TVRLWDHRTGTEVQS-LE--------FNSPVTSLEVSQDGRILTIAYGSS-----VKFWDAKSFGLLKSYKMPCN--VE- 228 (334)
T ss_pred ceEEEEeccCcEEEE-Ee--------cCCCCcceeeccCCCEEEEecCce-----eEEeccccccceeeccCccc--cc-
Confidence 467889888775432 21 344666778999998666553332 55556665322111111111 00
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeece-eecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPI-TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~l-T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.-+..|+. +++.-..++ .+|.+|-.+++..-. .++.+.....+.++||| .+|.++++++. ..||
T Consensus 229 ---------SASL~P~k~~fVaGged~--~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdG-E~yAsGSEDGT--irlW 294 (334)
T KOG0278|consen 229 ---------SASLHPKKEFFVAGGEDF--KVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDG-ELYASGSEDGT--IRLW 294 (334)
T ss_pred ---------cccccCCCceEEecCcce--EEEEEeccCCceeeecccCCCCceEEEEECCCC-ceeeccCCCce--EEEE
Confidence 00234554 444433333 367788777654444 35544333345699998 48888888874 7888
Q ss_pred EEEe
Q 008274 239 CAKL 242 (571)
Q Consensus 239 ~~~l 242 (571)
.+..
T Consensus 295 Qt~~ 298 (334)
T KOG0278|consen 295 QTTP 298 (334)
T ss_pred EecC
Confidence 7765
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=93.06 E-value=3 Score=38.88 Aligned_cols=196 Identities=13% Similarity=0.185 Sum_probs=87.4
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC-eEEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG-GFIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d-~~~~~s~~~ 185 (571)
-..-++.++|.||.+.++.+.+... .|+.++.++.-.+++.- .++.+. ... ...++ .+++.+++.
T Consensus 20 ~~~e~SGLTy~pd~~tLfaV~d~~~---~i~els~~G~vlr~i~l---~g~~D~-EgI-------~y~g~~~~vl~~Er~ 85 (248)
T PF06977_consen 20 ILDELSGLTYNPDTGTLFAVQDEPG---EIYELSLDGKVLRRIPL---DGFGDY-EGI-------TYLGNGRYVLSEERD 85 (248)
T ss_dssp --S-EEEEEEETTTTEEEEEETTTT---EEEEEETT--EEEEEE----SS-SSE-EEE-------EE-STTEEEEEETTT
T ss_pred ccCCccccEEcCCCCeEEEEECCCC---EEEEEcCCCCEEEEEeC---CCCCCc-eeE-------EEECCCEEEEEEcCC
Confidence 3445889999999887777776643 59999986433333322 111110 001 12233 355555555
Q ss_pred CccEEEEEeCCC--c-----eeeceee-----cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC-CCCCC
Q 008274 186 GFRHLYLHDING--T-----CLGPITE-----GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN-HTLEA 252 (571)
Q Consensus 186 g~~~l~~~~~~~--~-----~~~~lT~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~-~~~~~ 252 (571)
+ .|+.++.+. . +.+.++- ++..++.+. |++.++.|++.. +..| ..||.++....+. .....
T Consensus 86 ~--~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla-~D~~~~~L~v~k-E~~P--~~l~~~~~~~~~~~~~~~~ 159 (248)
T PF06977_consen 86 Q--RLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLA-YDPKTNRLFVAK-ERKP--KRLYEVNGFPGGFDLFVSD 159 (248)
T ss_dssp T--EEEEEEE----TT--EEEEEEEE---S---SS--EEEE-EETTTTEEEEEE-ESSS--EEEEEEESTT-SS--EEEE
T ss_pred C--cEEEEEEeccccccchhhceEEecccccCCCcceEEEE-EcCCCCEEEEEe-CCCC--hhhEEEccccCccceeecc
Confidence 4 677766522 1 1222331 233456664 999999888774 4455 7899887511110 00000
Q ss_pred CeEec----CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEcCC
Q 008274 253 PVKLT----NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQAND 328 (571)
Q Consensus 253 ~~~lt----~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d 328 (571)
...+. .....+..++.|....+... |. ....|..++. +|+....+.-... ...+ ....+++|=+.+.. +
T Consensus 160 ~~~~~~~~~~~~d~S~l~~~p~t~~lliL-S~--es~~l~~~d~-~G~~~~~~~L~~g-~~gl-~~~~~QpEGIa~d~-~ 232 (248)
T PF06977_consen 160 DQDLDDDKLFVRDLSGLSYDPRTGHLLIL-SD--ESRLLLELDR-QGRVVSSLSLDRG-FHGL-SKDIPQPEGIAFDP-D 232 (248)
T ss_dssp -HHHH-HT--SS---EEEEETTTTEEEEE-ET--TTTEEEEE-T-T--EEEEEE-STT-GGG--SS---SEEEEEE-T-T
T ss_pred ccccccccceeccccceEEcCCCCeEEEE-EC--CCCeEEEECC-CCCEEEEEEeCCc-ccCc-ccccCCccEEEECC-C
Confidence 00011 00112344666755454443 33 2236777774 6664433322111 1111 24567888888885 5
Q ss_pred C
Q 008274 329 G 329 (571)
Q Consensus 329 g 329 (571)
|
T Consensus 233 G 233 (248)
T PF06977_consen 233 G 233 (248)
T ss_dssp -
T ss_pred C
Confidence 5
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=92.93 E-value=5.5 Score=37.67 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=26.5
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
.+.+..+..+.|+|.+.+|+......+. .++... ++|+.+
T Consensus 52 s~Hd~~vtgvdWap~snrIvtcs~drna--yVw~~~-~~~~Wk 91 (361)
T KOG1523|consen 52 SEHDKIVTGVDWAPKSNRIVTCSHDRNA--YVWTQP-SGGTWK 91 (361)
T ss_pred hhhCcceeEEeecCCCCceeEccCCCCc--cccccC-CCCeec
Confidence 3567788889999999889988755532 234332 555543
|
|
| >KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=92.93 E-value=8.1 Score=36.15 Aligned_cols=60 Identities=15% Similarity=-0.063 Sum_probs=38.8
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe--EEEEEEeccCccEEEEEEECCCCceEEEEE
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI--LTAQVLNRSQTKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~ 151 (571)
-.|-+||..+-+.... +.+++.+..-.|||=.. -++.+..|+ .+|-+||++.|....+..
T Consensus 124 htlKVWDtnTlQ~a~~---------F~me~~VYshamSp~a~sHcLiA~gtr~---~~VrLCDi~SGs~sH~Ls 185 (397)
T KOG4283|consen 124 HTLKVWDTNTLQEAVD---------FKMEGKVYSHAMSPMAMSHCLIAAGTRD---VQVRLCDIASGSFSHTLS 185 (397)
T ss_pred ceEEEeecccceeeEE---------eecCceeehhhcChhhhcceEEEEecCC---CcEEEEeccCCcceeeec
Confidence 3477888877654322 34566777778999764 233333333 359999999999876544
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.17 Score=44.26 Aligned_cols=70 Identities=21% Similarity=0.133 Sum_probs=52.4
Q ss_pred hccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcC-CCeeEEEcCCCCCC--CCCCCcHHHHHHHHHHHHHHh
Q 008274 501 VHKMK-GKLLLVHGMIDENVHFRHTARLINALVAAR-KPYEILIFPDERHM--PRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 501 ~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~--~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.|+ +++|-|-|+.|+++.+.|+....+.+.... .....++.|++||. |....-+..++..|.+|+.++
T Consensus 129 p~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 129 PAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred hHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 44455 688889999999999998887766554333 23445578899996 455566788999999999875
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=92.79 E-value=12 Score=37.61 Aligned_cols=39 Identities=18% Similarity=0.176 Sum_probs=26.7
Q ss_pred cEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 188 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 188 ~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
..++++++++++.+.+..+-.....+ .|+++|+ +|++-+
T Consensus 164 g~i~r~~pdg~~~e~~a~G~rnp~Gl-~~d~~G~-l~~tdn 202 (367)
T TIGR02604 164 GGLFRYNPDGGKLRVVAHGFQNPYGH-SVDSWGD-VFFCDN 202 (367)
T ss_pred ceEEEEecCCCeEEEEecCcCCCccc-eECCCCC-EEEEcc
Confidence 36899999998888887664333444 4888875 455544
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.2 Score=51.68 Aligned_cols=69 Identities=22% Similarity=0.298 Sum_probs=54.5
Q ss_pred hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC--------CCeeEEEcCCCCCCCCCC-CcHHHHHHHHHHHHHH
Q 008274 501 VHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR--------KPYEILIFPDERHMPRRH-RDRIYMEERIWEFIER 569 (571)
Q Consensus 501 ~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~~ 569 (571)
.++--.+++++||..|..+++..+..+++++.+.- .=+++.+.|+.+|..... ....+....+.+|.++
T Consensus 349 F~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 349 FRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred HHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 33334699999999999999999999999887653 247888999999986433 3455788889999875
|
It also includes several bacterial homologues of unknown function. |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=92.75 E-value=12 Score=39.60 Aligned_cols=18 Identities=17% Similarity=-0.001 Sum_probs=12.3
Q ss_pred ceEEECCCCCeEEEEEEe
Q 008274 26 TGYWWSLDSKFIAFTQVD 43 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~ 43 (571)
....+||||+++..++.+
T Consensus 238 d~v~~spdGk~afvTsyN 255 (635)
T PRK02888 238 DNVDTDYDGKYAFSTCYN 255 (635)
T ss_pred ccceECCCCCEEEEeccC
Confidence 456788888887665543
|
|
| >KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=92.69 E-value=4.4 Score=45.30 Aligned_cols=174 Identities=13% Similarity=0.086 Sum_probs=83.8
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC--CceEEEE-------EeecCCeeeccCCcccCCC--------
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT--GQRKVIL-------VEELDSWVNLHDCFTPLDK-------- 169 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~--g~~~~l~-------~~~~~~w~~~~~~~~~~~~-------- 169 (571)
-+..+...+||||++.+++++++.+ |+.+.-.- =..+.|. +....+|......|+...+
T Consensus 108 vd~GI~aaswS~Dee~l~liT~~~t----ll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~ 183 (1265)
T KOG1920|consen 108 VDNGISAASWSPDEELLALITGRQT----LLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKI 183 (1265)
T ss_pred ccCceEEEeecCCCcEEEEEeCCcE----EEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccc
Confidence 4567888999999999999887653 44433211 0011221 1111245433334442211
Q ss_pred ----------------CCccCCCe-EEEEE---ecCCccEEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEc
Q 008274 170 ----------------GVTKYSGG-FIWAS---EKTGFRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 170 ----------------~~~~~~d~-~~~~s---~~~g~~~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~ 228 (571)
..+|.+|+ ++.+| ...|-+.|-+++.+| . -+.++..- .......|-|.|..+.....
T Consensus 184 ~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drEg-~-Lns~se~~~~l~~~LsWkPsgs~iA~iq~ 261 (1265)
T KOG1920|consen 184 EKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDREG-A-LNSTSEPVEGLQHSLSWKPSGSLIAAIQC 261 (1265)
T ss_pred cccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEecccc-h-hhcccCcccccccceeecCCCCeEeeeee
Confidence 13677777 44443 335557888888763 2 22232211 11223458888877766665
Q ss_pred CCCCceeEEEEEEeCCCCC-CCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 229 LDGPLESHLYCAKLYPDWN-HTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 229 ~~~~~~~~l~~~~l~~~g~-~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
..+. ..|..+.- .|- +. .-..+.+.+.. .....|+.++.-++...+... -..+++...
T Consensus 262 ~~sd--~~IvffEr--NGL~hg-~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e-~~~v~lwt~ 321 (1265)
T KOG1920|consen 262 KTSD--SDIVFFER--NGLRHG-EFVLPFPLDEKEVEELAWNSNSDILAVVTSNLE-NSLVQLWTT 321 (1265)
T ss_pred cCCC--CcEEEEec--CCcccc-ccccCCcccccchheeeecCCCCceeeeecccc-cceEEEEEe
Confidence 4432 23333332 121 00 01111222222 445577777777766554432 223444443
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.18 Score=46.76 Aligned_cols=52 Identities=21% Similarity=0.165 Sum_probs=33.9
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-----CCeeEEEEEcCccC
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-----PDVFQCAVSGAPVT 468 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-----~~~~~~~v~~~~~~ 468 (571)
.++...++.+.++. ...++.+.|||+||.+|..++... +..+.+....+|..
T Consensus 112 ~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 112 NQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 34455555554442 356899999999999998877642 33456665566544
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=92.67 E-value=0.19 Score=45.05 Aligned_cols=72 Identities=11% Similarity=-0.050 Sum_probs=45.6
Q ss_pred CCcEEEEECCCCCCCChhh-hHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC
Q 008274 382 KGILVWKLDNRGTARRGLK-FEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF 454 (571)
Q Consensus 382 ~G~~v~~~d~rG~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~ 454 (571)
.-..|++|=||=..-.... -.........+..+.|+.+|.++.+++.. +...++|+|||.|+.+...++.++
T Consensus 44 ~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred cCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 3467888888743211100 00000111123357899999998887642 456899999999999999998763
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.61 E-value=0.32 Score=48.36 Aligned_cols=55 Identities=20% Similarity=0.170 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC--------CCeeEEEEEcCccCC
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF--------PDVFQCAVSGAPVTS 469 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--------~~~~~~~v~~~~~~~ 469 (571)
+++.+.++.+.++..-..-+|.+.|||+||.+|+.+|... ...+.+....+|-..
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCccc
Confidence 4566777777765321223599999999999999887531 112455556666544
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=92.60 E-value=0.61 Score=44.31 Aligned_cols=103 Identities=14% Similarity=0.016 Sum_probs=56.2
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
.+.|+|| .||-+.... ......+.+.+.+ -|.-+.++.. |.+ ....|.... -+.+..+.+.+.
T Consensus 24 ~~~P~Vi-wHG~GD~c~-----~~g~~~~~~l~~~~~g~~~~~i~i-g~~-~~~s~~~~~--------~~Qve~vce~l~ 87 (314)
T PLN02633 24 VSVPFIM-LHGIGTQCS-----DATNANFTQLLTNLSGSPGFCLEI-GNG-VGDSWLMPL--------TQQAEIACEKVK 87 (314)
T ss_pred CCCCeEE-ecCCCcccC-----CchHHHHHHHHHhCCCCceEEEEE-CCC-ccccceeCH--------HHHHHHHHHHHh
Confidence 4678877 599543321 1234445666654 3555555533 222 111111111 122333344444
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCC--eeEEEEEcCc
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPD--VFQCAVSGAP 466 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~--~~~~~v~~~~ 466 (571)
+.+... +-+.++|+|.||.++-.++.+.|+ .++-.|+.++
T Consensus 88 ~~~~l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlgg 129 (314)
T PLN02633 88 QMKELS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAG 129 (314)
T ss_pred hchhhh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecC
Confidence 433222 469999999999999999888776 3677777654
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.45 E-value=8.9 Score=35.43 Aligned_cols=110 Identities=14% Similarity=0.122 Sum_probs=65.4
Q ss_pred eecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCC
Q 008274 10 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG 89 (571)
Q Consensus 10 ~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~ 89 (571)
||-.=|.++.--.+....+|+|-||.+|-=-.-..+. .+.... . ..-.+...|... ..+.+||+++
T Consensus 18 yN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGa--vW~~Di-d---------~~s~~liTGSAD--~t~kLWDv~t 83 (327)
T KOG0643|consen 18 YNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGA--VWCCDI-D---------WDSKHLITGSAD--QTAKLWDVET 83 (327)
T ss_pred ecCCCcEEEEecCCCCceEEEecCCceeeeecCCCce--EEEEEe-c---------CCcceeeecccc--ceeEEEEcCC
Confidence 5667788888777788899999999998321111111 111100 0 000111223222 2467899999
Q ss_pred CceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEec-cCccEEEEEEECC
Q 008274 90 GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNR-SQTKLKVLKFDIK 142 (571)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r-~~~~~~i~~~d~~ 142 (571)
|+.... .+....+-.+.|+++|.+++++++. ......|..+|+.
T Consensus 84 Gk~la~---------~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~ 128 (327)
T KOG0643|consen 84 GKQLAT---------WKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIR 128 (327)
T ss_pred CcEEEE---------eecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEcc
Confidence 976533 2345567778999999977766543 4455567777776
|
|
| >KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=92.24 E-value=6.6 Score=37.87 Aligned_cols=138 Identities=12% Similarity=0.063 Sum_probs=79.5
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecC-Ce
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELD-SW 157 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~-~w 157 (571)
.+||+||+..-+.. .++... .+....+...+.++.+.++++=..+. ..+|+++|+.+-+... |..+.+. ..
T Consensus 106 e~IyIydI~~MklL-hTI~t~----~~n~~gl~AlS~n~~n~ylAyp~s~t--~GdV~l~d~~nl~~v~~I~aH~~~lAa 178 (391)
T KOG2110|consen 106 ESIYIYDIKDMKLL-HTIETT----PPNPKGLCALSPNNANCYLAYPGSTT--SGDVVLFDTINLQPVNTINAHKGPLAA 178 (391)
T ss_pred ccEEEEecccceee-hhhhcc----CCCccceEeeccCCCCceEEecCCCC--CceEEEEEcccceeeeEEEecCCceeE
Confidence 35899999875432 122210 12344566667777777888865554 4468999998766543 3322222 11
Q ss_pred eeccCCcccCCCCCccCCCe-EEEEEecCC-ccEEEEEeCCCceeeceeecCeEE--EEEEEEeecCcEEEEEEcCCCCc
Q 008274 158 VNLHDCFTPLDKGVTKYSGG-FIWASEKTG-FRHLYLHDINGTCLGPITEGDWMV--EQIVGVNEASGQVYFTGTLDGPL 233 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g-~~~l~~~~~~~~~~~~lT~~~~~~--~~~~~~s~dg~~l~~~~~~~~~~ 233 (571)
+ ..+++| ++.++...| .-+++.+ .+|....++=+|-.-+ -++ .|++|+..|..+++.+-
T Consensus 179 l-------------afs~~G~llATASeKGTVIRVf~v-~~G~kl~eFRRG~~~~~IySL-~Fs~ds~~L~~sS~TeT-- 241 (391)
T KOG2110|consen 179 L-------------AFSPDGTLLATASEKGTVIRVFSV-PEGQKLYEFRRGTYPVSIYSL-SFSPDSQFLAASSNTET-- 241 (391)
T ss_pred E-------------EECCCCCEEEEeccCceEEEEEEc-CCccEeeeeeCCceeeEEEEE-EECCCCCeEEEecCCCe--
Confidence 1 224555 554444444 3333333 3454555665665433 334 59999998888877654
Q ss_pred eeEEEEEEe
Q 008274 234 ESHLYCAKL 242 (571)
Q Consensus 234 ~~~l~~~~l 242 (571)
.|+++++.
T Consensus 242 -VHiFKL~~ 249 (391)
T KOG2110|consen 242 -VHIFKLEK 249 (391)
T ss_pred -EEEEEecc
Confidence 89999875
|
|
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=92.20 E-value=11 Score=39.99 Aligned_cols=149 Identities=12% Similarity=0.058 Sum_probs=74.3
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG 186 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g 186 (571)
..-+-.+.+|.|...++.-++. . |-..+.+++++ ++++.. ++ ....|- .+|..+++.-+.|
T Consensus 373 R~dVRsl~vS~d~~~~~Sga~~---S--ikiWn~~t~kciRTi~~~----y~-l~~~Fv--------pgd~~Iv~G~k~G 434 (888)
T KOG0306|consen 373 RSDVRSLCVSSDSILLASGAGE---S--IKIWNRDTLKCIRTITCG----YI-LASKFV--------PGDRYIVLGTKNG 434 (888)
T ss_pred hhheeEEEeecCceeeeecCCC---c--EEEEEccCcceeEEeccc----cE-EEEEec--------CCCceEEEeccCC
Confidence 3345667889887644433222 2 66667887765 344332 11 011122 2455777766777
Q ss_pred ccEEEEEeCCCceeeceee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCC--CCCC----CCCCeEecCC
Q 008274 187 FRHLYLHDINGTCLGPITE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPD--WNHT----LEAPVKLTNG 259 (571)
Q Consensus 187 ~~~l~~~~~~~~~~~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~--g~~~----~~~~~~lt~~ 259 (571)
--+ ++++.+...-..+. .+..+.++ ..+||++..+..+.+.- ..+|...+..+ |..+ +...+.|--.
T Consensus 435 el~--vfdlaS~~l~Eti~AHdgaIWsi-~~~pD~~g~vT~saDkt---VkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ 508 (888)
T KOG0306|consen 435 ELQ--VFDLASASLVETIRAHDGAIWSI-SLSPDNKGFVTGSADKT---VKFWDFKLVVSVPGTQKKVLSLKHTRTLELE 508 (888)
T ss_pred ceE--EEEeehhhhhhhhhccccceeee-eecCCCCceEEecCCcE---EEEEeEEEEeccCcccceeeeeccceEEecc
Confidence 433 44444433222222 22223333 47788877665554433 44444333211 2210 0011233333
Q ss_pred CceEEEEECCCCCEEEEEeeC
Q 008274 260 KGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 260 ~g~~~~~~s~~g~~~v~~~s~ 280 (571)
+....+++||||++++..--+
T Consensus 509 ddvL~v~~Spdgk~LaVsLLd 529 (888)
T KOG0306|consen 509 DDVLCVSVSPDGKLLAVSLLD 529 (888)
T ss_pred ccEEEEEEcCCCcEEEEEecc
Confidence 445667999999999876544
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=91.93 E-value=0.99 Score=42.91 Aligned_cols=103 Identities=11% Similarity=-0.083 Sum_probs=54.8
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
.+.|+|| .||-+.... ...+..+.+.+.+ .|+-+.++- .|.+ ....|. .+ .-+.+..+.+.+.
T Consensus 25 ~~~PvVi-wHGlgD~~~-----~~~~~~~~~~i~~~~~~pg~~v~-ig~~-~~~s~~----~~----~~~Qv~~vce~l~ 88 (306)
T PLN02606 25 LSVPFVL-FHGFGGECS-----NGKVSNLTQFLINHSGYPGTCVE-IGNG-VQDSLF----MP----LRQQASIACEKIK 88 (306)
T ss_pred CCCCEEE-ECCCCcccC-----CchHHHHHHHHHhCCCCCeEEEE-ECCC-cccccc----cC----HHHHHHHHHHHHh
Confidence 4678877 699542211 1234555666652 365444443 2221 100110 11 0122333444444
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCC--eeEEEEEcCc
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPD--VFQCAVSGAP 466 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~--~~~~~v~~~~ 466 (571)
+.+... +-+.++|+|.||.++-.++.+.|+ .++-.|+.++
T Consensus 89 ~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 89 QMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred cchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecC
Confidence 433322 469999999999999999888766 3666666543
|
|
| >KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=91.92 E-value=2.2 Score=42.70 Aligned_cols=157 Identities=8% Similarity=-0.003 Sum_probs=83.1
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
|.+|||......+ +++ +.......+..|+||..|+.- .- ++-+--.|+.+|. ++-+.. +..
T Consensus 533 I~vwDLhnq~~Vr-qfq-------GhtDGascIdis~dGtklWTG--Gl--DntvRcWDlregr--qlqqhd---F~S-- 593 (705)
T KOG0639|consen 533 IAVWDLHNQTLVR-QFQ-------GHTDGASCIDISKDGTKLWTG--GL--DNTVRCWDLREGR--QLQQHD---FSS-- 593 (705)
T ss_pred EEEEEcccceeee-ccc-------CCCCCceeEEecCCCceeecC--CC--ccceeehhhhhhh--hhhhhh---hhh--
Confidence 5788888654432 221 233455668889999866542 21 1123334555543 221110 000
Q ss_pred CCcccCCCCCccCC--CeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 162 DCFTPLDKGVTKYS--GGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 162 ~~~~~~~~~~~~~~--d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
.+|+- ...+ |.+.+-.+ ..+++++...+.+.-+|+..+.-+-+. .|++-|++.+-++. ++ ..+.|+
T Consensus 594 QIfSL-----g~cP~~dWlavGMe---ns~vevlh~skp~kyqlhlheScVLSl-KFa~cGkwfvStGk-Dn--lLnawr 661 (705)
T KOG0639|consen 594 QIFSL-----GYCPTGDWLAVGME---NSNVEVLHTSKPEKYQLHLHESCVLSL-KFAYCGKWFVSTGK-DN--LLNAWR 661 (705)
T ss_pred hheec-----ccCCCccceeeecc---cCcEEEEecCCccceeecccccEEEEE-EecccCceeeecCc-hh--hhhhcc
Confidence 01111 1122 22333222 346777777788888888877555555 48888875544433 33 277788
Q ss_pred EEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEE
Q 008274 240 AKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVD 276 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~ 276 (571)
..- +. .+.+.....-..++.+|.|.+++|-
T Consensus 662 tPy--Ga-----siFqskE~SsVlsCDIS~ddkyIVT 691 (705)
T KOG0639|consen 662 TPY--GA-----SIFQSKESSSVLSCDISFDDKYIVT 691 (705)
T ss_pred Ccc--cc-----ceeeccccCcceeeeeccCceEEEe
Confidence 775 33 3444444334556788888877653
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=91.71 E-value=1.1 Score=42.20 Aligned_cols=108 Identities=18% Similarity=0.139 Sum_probs=47.2
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHh--CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHH-HHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS--KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLT-GAEW 423 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~ 423 (571)
.+.|+|| .||-+.+... ...+..+...+.+ -|.-|.+++.- .+.. .+.......+ +.+..+ +.+.
T Consensus 4 ~~~PvVi-wHGmGD~~~~----~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~-~D~~~s~f~~-----v~~Qv~~vc~~ 71 (279)
T PF02089_consen 4 SPLPVVI-WHGMGDSCCN----PSSMGSIKELIEEQHPGTYVHSIEIG-NDPS-EDVENSFFGN-----VNDQVEQVCEQ 71 (279)
T ss_dssp SS--EEE-E--TT--S------TTTHHHHHHHHHHHSTT--EEE--SS-SSHH-HHHHHHHHSH-----HHHHHHHHHHH
T ss_pred CCCcEEE-EEcCccccCC----hhHHHHHHHHHHHhCCCceEEEEEEC-CCcc-hhhhhhHHHH-----HHHHHHHHHHH
Confidence 4678877 5995433210 1122333333332 48888888752 2211 1111111122 333333 3333
Q ss_pred HHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-eeEEEEEcCcc
Q 008274 424 LIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGAPV 467 (571)
Q Consensus 424 l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-~~~~~v~~~~~ 467 (571)
+.+.+... +-+.++|+|.||.+.-.++.+.|+ .++-.|+.++.
T Consensus 72 l~~~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 72 LANDPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp HHH-GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred HhhChhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 43333322 579999999999999888887654 46777776543
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=91.61 E-value=14 Score=39.08 Aligned_cols=203 Identities=14% Similarity=0.146 Sum_probs=100.7
Q ss_pred cCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCC
Q 008274 22 MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGG 101 (571)
Q Consensus 22 ~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~ 101 (571)
+...+.++||++|+.|+-+..+ .+-..|+++++.. +... .
T Consensus 19 iYtGG~~~~s~nG~~L~t~~~d-------------------------------------~Vi~idv~t~~~~-l~s~--~ 58 (775)
T KOG0319|consen 19 IYTGGPVAWSSNGQHLYTACGD-------------------------------------RVIIIDVATGSIA-LPSG--S 58 (775)
T ss_pred eecCCceeECCCCCEEEEecCc-------------------------------------eEEEEEccCCcee-cccC--C
Confidence 4444558999999988654322 3566788887763 2111 1
Q ss_pred CCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEe--ecCCeeeccCCcccCCCCCccCCCe-E
Q 008274 102 TDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE--ELDSWVNLHDCFTPLDKGVTKYSGG-F 178 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~--~~~~w~~~~~~~~~~~~~~~~~~d~-~ 178 (571)
.+....+....-+||++.++.+ .|.+ .|-.+.+.+|+..+.-+. +.+.. .- ..++.+ +
T Consensus 59 ---~ed~d~ita~~l~~d~~~L~~a-~rs~---llrv~~L~tgk~irswKa~He~Pvi-------~m-----a~~~~g~L 119 (775)
T KOG0319|consen 59 ---NEDEDEITALALTPDEEVLVTA-SRSQ---LLRVWSLPTGKLIRSWKAIHEAPVI-------TM-----AFDPTGTL 119 (775)
T ss_pred ---ccchhhhheeeecCCccEEEEe-eccc---eEEEEEcccchHhHhHhhccCCCeE-------EE-----EEcCCCce
Confidence 1234567778899998766655 4443 366667777754332221 11100 00 112222 3
Q ss_pred EEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcE-EEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe
Q 008274 179 IWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQ-VYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL 256 (571)
Q Consensus 179 ~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l 256 (571)
+....-+|. +-+.|..++.. ..+-.....+.... |.|+-++ +.+++..++ .++..++.. .. . ++
T Consensus 120 lAtggaD~~--v~VWdi~~~~~th~fkG~gGvVssl~-F~~~~~~~lL~sg~~D~----~v~vwnl~~-~~-----t-cl 185 (775)
T KOG0319|consen 120 LATGGADGR--VKVWDIKNGYCTHSFKGHGGVVSSLL-FHPHWNRWLLASGATDG----TVRVWNLND-KR-----T-CL 185 (775)
T ss_pred EEeccccce--EEEEEeeCCEEEEEecCCCceEEEEE-eCCccchhheeecCCCc----eEEEEEccc-Cc-----h-HH
Confidence 333222333 33444444432 23332233455554 6665544 445544443 455556621 11 1 22
Q ss_pred cC----CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 257 TN----GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 257 t~----~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
-. .....+..+++|+..++.+... -.+++.++.+-+..+.+
T Consensus 186 ~~~~~H~S~vtsL~~~~d~~~~ls~~RD----kvi~vwd~~~~~~l~~l 230 (775)
T KOG0319|consen 186 HTMILHKSAVTSLAFSEDSLELLSVGRD----KVIIVWDLVQYKKLKTL 230 (775)
T ss_pred HHHHhhhhheeeeeeccCCceEEEeccC----cEEEEeehhhhhhhhee
Confidence 11 1123345788888766554322 25666676555544433
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=91.55 E-value=13 Score=35.54 Aligned_cols=166 Identities=13% Similarity=0.098 Sum_probs=87.4
Q ss_pred eEEEEEecCCccEEEEEeCCCcee-eceeec-CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCe
Q 008274 177 GFIWASEKTGFRHLYLHDINGTCL-GPITEG-DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPV 254 (571)
Q Consensus 177 ~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~ 254 (571)
.+++++.|.|.. ++++|..+++. ..++.+ ...+-.-..||+||++||.+-++....+--|-..+.. .+- .+..
T Consensus 18 ~avafaRRPG~~-~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~-~~~---~ri~ 92 (305)
T PF07433_consen 18 EAVAFARRPGTF-ALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA-RGY---RRIG 92 (305)
T ss_pred eEEEEEeCCCcE-EEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc-CCc---EEEe
Confidence 366677777754 56677666654 455443 3344333348999999999988654334444444552 111 1222
Q ss_pred Ee-cCCCceEEEEECCCCCEEEEEeeCC-CCC-------------CEEEEEEcCCCceeEeccCCCCChhhhccCCCCCC
Q 008274 255 KL-TNGKGKHVAVLDHNMRNFVDFHDSL-DSP-------------PRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPP 319 (571)
Q Consensus 255 ~l-t~~~g~~~~~~s~~g~~~v~~~s~~-~~p-------------~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 319 (571)
.. +.+-|-|...+.|||+.+|..-..- +.| |.|..++..+|+.+.+.. +.+... ....
T Consensus 93 E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~----Lp~~~~---~lSi 165 (305)
T PF07433_consen 93 EFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVE----LPPDLH---QLSI 165 (305)
T ss_pred EecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeee----cCcccc---ccce
Confidence 22 3344567778999997776532221 222 455556555665433211 111111 1233
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCC
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPC 360 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~ 360 (571)
+.+.+.. +|..+.+.-|..+. ...|-+|.+|....
T Consensus 166 RHLa~~~-~G~V~~a~Q~qg~~-----~~~~PLva~~~~g~ 200 (305)
T PF07433_consen 166 RHLAVDG-DGTVAFAMQYQGDP-----GDAPPLVALHRRGG 200 (305)
T ss_pred eeEEecC-CCcEEEEEecCCCC-----CccCCeEEEEcCCC
Confidence 4454444 67777777666543 22344555665433
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=91.27 E-value=15 Score=35.55 Aligned_cols=122 Identities=16% Similarity=0.099 Sum_probs=70.4
Q ss_pred eeeeeeeeecccceeeeec--cCCCceEEECCCCCeEEEE--------EEeCCCCCeEEEeecCCCCCCCCCcccccC--
Q 008274 3 LAFHVLQTHGLAEYIAQEE--MDRKTGYWWSLDSKFIAFT--------QVDSSEIPRFRIMHQGKSSVGSEAQEDHAY-- 70 (571)
Q Consensus 3 ~~~~~~~~~g~~~~~~~~~--~~~~~~~~wSPDg~~iay~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-- 70 (571)
+||--++.+|. |+++-- .++.....||-||.+||=- -.-+++-....+.... ...+.+..
T Consensus 87 ~AflW~~~~ge--~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~------~dieWl~WHp 158 (399)
T KOG0296|consen 87 LAFLWDISTGE--FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEV------EDIEWLKWHP 158 (399)
T ss_pred eEEEEEccCCc--ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeeccc------CceEEEEecc
Confidence 68889999998 666542 3566788899999988651 1111221222221011 11111111
Q ss_pred ----CCCCCCCceEEEEEEECCCC-ceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc
Q 008274 71 ----PFAGASNVKVRLGVVSAAGG-PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ 145 (571)
Q Consensus 71 ----~~~g~~~~~~~l~~~dl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~ 145 (571)
-..|...+ .+|+|.+.++ ..+.+ .+.......-.+.||||+++...... .|...|+++|+
T Consensus 159 ~a~illAG~~DG--svWmw~ip~~~~~kv~---------~Gh~~~ct~G~f~pdGKr~~tgy~dg----ti~~Wn~ktg~ 223 (399)
T KOG0296|consen 159 RAHILLAGSTDG--SVWMWQIPSQALCKVM---------SGHNSPCTCGEFIPDGKRILTGYDDG----TIIVWNPKTGQ 223 (399)
T ss_pred cccEEEeecCCC--cEEEEECCCcceeeEe---------cCCCCCcccccccCCCceEEEEecCc----eEEEEecCCCc
Confidence 12233332 4788888874 33333 22334455568999999887665433 38888999997
Q ss_pred eE
Q 008274 146 RK 147 (571)
Q Consensus 146 ~~ 147 (571)
.-
T Consensus 224 p~ 225 (399)
T KOG0296|consen 224 PL 225 (399)
T ss_pred ee
Confidence 54
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.87 Score=32.12 Aligned_cols=45 Identities=16% Similarity=0.106 Sum_probs=25.8
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCC-CCCCCCCceEEEEEcCCCCce
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDE-SRYGPPPYKTLISVYGGPCVQ 362 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~-~~~~~~~~P~vv~~hGg~~~~ 362 (571)
..|...+.+.||..|..+-+.+.. .....++.|+|++.||-..+.
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSS 56 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--G
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccCh
Confidence 668999999999989888776654 212335778999999965543
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.31 Score=47.72 Aligned_cols=39 Identities=18% Similarity=0.096 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
+.+.+.++.+.++..-...+|.|.|||+||.+|..++..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 345566666666532123469999999999999988764
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.92 E-value=19 Score=36.25 Aligned_cols=164 Identities=10% Similarity=0.025 Sum_probs=91.9
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecCCcc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFR 188 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~ 188 (571)
.-..+.++||++.+....... ....+..+|..++....-. ..+ . .| .....++++ .++..+ .+-.
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~-~~~~vsvid~~t~~~~~~~--~vG-~-------~P--~~~a~~p~g~~vyv~~-~~~~ 182 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGN-GNNTVSVIDAATNKVTATI--PVG-N-------TP--TGVAVDPDGNKVYVTN-SDDN 182 (381)
T ss_pred CCceEEECCCCCEEEEEeccc-CCceEEEEeCCCCeEEEEE--ecC-C-------Cc--ceEEECCCCCeEEEEe-cCCC
Confidence 445689999998665554332 3346999999988654321 111 1 01 111224444 455555 4456
Q ss_pred EEEEEeCCCceeeceeec-----CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe--cCCC-
Q 008274 189 HLYLHDINGTCLGPITEG-----DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL--TNGK- 260 (571)
Q Consensus 189 ~l~~~~~~~~~~~~lT~~-----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l--t~~~- 260 (571)
.|..++..+....+ ... .........++++|+.+|..-.... ...+.+++.. .. ..... +...
T Consensus 183 ~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~--~~~v~~id~~--~~----~v~~~~~~~~~~ 253 (381)
T COG3391 183 TVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSG--SNNVLKIDTA--TG----NVTATDLPVGSG 253 (381)
T ss_pred eEEEEeCCCcceec-cccccccccCCCCceEEECCCCCEEEEEeccCC--CceEEEEeCC--Cc----eEEEeccccccC
Confidence 68888876665543 111 1111122348999998888876543 3677787772 22 12221 2222
Q ss_pred ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeE
Q 008274 261 GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVL 299 (571)
Q Consensus 261 g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~ 299 (571)
......++|+|+++....+. ...+++++.......+
T Consensus 254 ~~~~v~~~p~g~~~yv~~~~---~~~V~vid~~~~~v~~ 289 (381)
T COG3391 254 APRGVAVDPAGKAAYVANSQ---GGTVSVIDGATDRVVK 289 (381)
T ss_pred CCCceeECCCCCEEEEEecC---CCeEEEEeCCCCceee
Confidence 12345889999876554333 5688898876665443
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.33 Score=48.29 Aligned_cols=39 Identities=18% Similarity=0.234 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
+++.+.++.+.++..-..-+|.+.|||+||.+|+.+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 446666666665421122379999999999999988764
|
|
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.81 E-value=12 Score=33.55 Aligned_cols=172 Identities=20% Similarity=0.260 Sum_probs=86.0
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE--EEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV--ILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT 185 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~--l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~ 185 (571)
.+.+...+|||+|.+|+.-+|.. ...+..+|.+|-+..- +.-.-.++-+ ..+.++.. .+..+-+..|-..
T Consensus 89 kgsiyc~~ws~~geliatgsndk--~ik~l~fn~dt~~~~g~dle~nmhdgti---rdl~fld~---~~s~~~il~s~ga 160 (350)
T KOG0641|consen 89 KGSIYCTAWSPCGELIATGSNDK--TIKVLPFNADTCNATGHDLEFNMHDGTI---RDLAFLDD---PESGGAILASAGA 160 (350)
T ss_pred CccEEEEEecCccCeEEecCCCc--eEEEEecccccccccCcceeeeecCCce---eeeEEecC---CCcCceEEEecCC
Confidence 34667789999999888766544 2345566666543221 1000000111 01122221 1233455566667
Q ss_pred CccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC---CCc
Q 008274 186 GFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN---GKG 261 (571)
Q Consensus 186 g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~---~~g 261 (571)
|--+||..|-..++ ...+......+-...+|+ +.++.+++.+.. ...|-+.+ .. -+..|-. +.|
T Consensus 161 gdc~iy~tdc~~g~~~~a~sghtghilalyswn---~~m~~sgsqdkt--irfwdlrv--~~-----~v~~l~~~~~~~g 228 (350)
T KOG0641|consen 161 GDCKIYITDCGRGQGFHALSGHTGHILALYSWN---GAMFASGSQDKT--IRFWDLRV--NS-----CVNTLDNDFHDGG 228 (350)
T ss_pred CcceEEEeecCCCCcceeecCCcccEEEEEEec---CcEEEccCCCce--EEEEeeec--cc-----eeeeccCcccCCC
Confidence 77889998865554 345555454555665664 456666665432 22222222 10 1111111 112
Q ss_pred -----eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 262 -----KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 262 -----~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
...+.+.|.|+.++--.. ... -.+++...++.+....+
T Consensus 229 lessavaav~vdpsgrll~sg~~--dss--c~lydirg~r~iq~f~p 271 (350)
T KOG0641|consen 229 LESSAVAAVAVDPSGRLLASGHA--DSS--CMLYDIRGGRMIQRFHP 271 (350)
T ss_pred cccceeEEEEECCCcceeeeccC--CCc--eEEEEeeCCceeeeeCC
Confidence 234478899987654332 233 33445556776665554
|
|
| >KOG2394 consensus WD40 protein DMR-N9 [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.49 E-value=4.2 Score=41.18 Aligned_cols=130 Identities=10% Similarity=0.073 Sum_probs=65.1
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCcc
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~ 188 (571)
..+..+.|.|.++-++.++.+.. ++|.+|.+- +....... +... ..++.|.....+.-
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sG---nlyly~~~~-----~~~~t~p~-------~~~~-----k~~~~f~i~t~ksk-- 277 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASG---NLYLYDKEI-----VCGATAPS-------YQAL-----KDGDQFAILTSKSK-- 277 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecC---ceEEeeccc-----cccCCCCc-------cccc-----CCCCeeEEeeeecc--
Confidence 45677899998876666666664 377777621 11111111 2221 13444443221110
Q ss_pred EEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC--CCceEEEE
Q 008274 189 HLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN--GKGKHVAV 266 (571)
Q Consensus 189 ~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~--~~g~~~~~ 266 (571)
... ....+...+.-.+.++. +|+||++|...+.+. ...|+-.+. . ....+-. -.|...+.
T Consensus 278 ----~~r--NPv~~w~~~~g~in~f~-FS~DG~~LA~VSqDG---fLRvF~fdt----~----eLlg~mkSYFGGLLCvc 339 (636)
T KOG2394|consen 278 ----KTR--NPVARWHIGEGSINEFA-FSPDGKYLATVSQDG---FLRIFDFDT----Q----ELLGVMKSYFGGLLCVC 339 (636)
T ss_pred ----ccC--CccceeEecccccccee-EcCCCceEEEEecCc---eEEEeeccH----H----HHHHHHHhhccceEEEE
Confidence 000 00111222222344554 899999999887644 255555442 0 1111111 13445669
Q ss_pred ECCCCCEEEEEe
Q 008274 267 LDHNMRNFVDFH 278 (571)
Q Consensus 267 ~s~~g~~~v~~~ 278 (571)
|||||||+|.-.
T Consensus 340 WSPDGKyIvtGG 351 (636)
T KOG2394|consen 340 WSPDGKYIVTGG 351 (636)
T ss_pred EcCCccEEEecC
Confidence 999999987643
|
|
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=90.22 E-value=0.3 Score=48.35 Aligned_cols=102 Identities=21% Similarity=0.261 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh----cCCC--eeEEEEEcCcc-CCcccc------cchhhhh-
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA----RFPD--VFQCAVSGAPV-TSWDGY------DTFYTEK- 480 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~----~~~~--~~~~~v~~~~~-~~~~~~------~~~~~~~- 480 (571)
.-+.+++++|..++.-++++|.|.|.|+||+.++.-+- ..|. .+ .+++.+++ .+...+ ...+...
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v-~~~~DsG~f~d~~~~~~~~~~~~~~~~~~ 216 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKV-KCLSDSGFFLDNPDYSGNPCIRSFYSDVV 216 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceE-EEeccccccccccCcccchhHHHHHHHHH
Confidence 34678899998886668899999999999999986543 2442 23 23344443 332111 1111110
Q ss_pred -----hcCCCCCChhhhc--cCCcchhhccCCCcEEEEecCCCC
Q 008274 481 -----YMGLPSEDPVGYE--YSSVMHHVHKMKGKLLLVHGMIDE 517 (571)
Q Consensus 481 -----~~g~~~~~~~~~~--~~s~~~~~~~~~~p~lli~G~~D~ 517 (571)
..+.|..-...+. =.-|...+..|++|++|++...|.
T Consensus 217 ~~~~~~~~~p~~C~~~~~~~C~f~q~~~~~I~tPlFivns~YD~ 260 (361)
T PF03283_consen 217 GLQNWSKSLPESCVAQYDPECFFPQYLYPYIKTPLFIVNSLYDS 260 (361)
T ss_pred HHHHhhccCCHhHHhccCccccchHHHHhhcCcceeeehhhhCH
Confidence 0022221111111 122334567889999999999983
|
|
| >KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=90.04 E-value=7.3 Score=37.59 Aligned_cols=94 Identities=15% Similarity=0.167 Sum_probs=58.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCC-eee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS-WVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~-w~~ 159 (571)
++++||+.+=+.... + ......+..++++|||+.|+..+.++. -|-++.+.+|+. +++-..+. ...
T Consensus 154 dV~l~d~~nl~~v~~-I-------~aH~~~lAalafs~~G~llATASeKGT---VIRVf~v~~G~k--l~eFRRG~~~~~ 220 (391)
T KOG2110|consen 154 DVVLFDTINLQPVNT-I-------NAHKGPLAALAFSPDGTLLATASEKGT---VIRVFSVPEGQK--LYEFRRGTYPVS 220 (391)
T ss_pred eEEEEEcccceeeeE-E-------EecCCceeEEEECCCCCEEEEeccCce---EEEEEEcCCccE--eeeeeCCceeeE
Confidence 678899887443322 1 235678889999999999999877652 356667777753 33322111 010
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeC
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDI 195 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~ 195 (571)
+++ +++++|+ |+..+...+--||+.++.
T Consensus 221 ---IyS-----L~Fs~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 221 ---IYS-----LSFSPDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred ---EEE-----EEECCCCCeEEEecCCCeEEEEEecc
Confidence 011 1234454 777777788889999863
|
|
| >KOG2048 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.88 E-value=1.5 Score=45.31 Aligned_cols=63 Identities=10% Similarity=0.080 Sum_probs=43.2
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEE
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL 150 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~ 150 (571)
.+|.++++++.+.+.+.-.. ......+++.+.-||||.+|+....+.+ |+.+|+++++.+.+.
T Consensus 451 ~~le~~el~~ps~kel~~~~----~~~~~~~I~~l~~SsdG~yiaa~~t~g~----I~v~nl~~~~~~~l~ 513 (691)
T KOG2048|consen 451 FSLEEFELETPSFKELKSIQ----SQAKCPSISRLVVSSDGNYIAAISTRGQ----IFVYNLETLESHLLK 513 (691)
T ss_pred ceeEEEEecCcchhhhhccc----cccCCCcceeEEEcCCCCEEEEEeccce----EEEEEcccceeecch
Confidence 45566666654443331110 0234568889999999999998886664 999999999877664
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.81 E-value=0.29 Score=48.89 Aligned_cols=74 Identities=15% Similarity=-0.025 Sum_probs=44.7
Q ss_pred chhhhHHHHhCCcE------EEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHH
Q 008274 372 VDMRAQYLRSKGIL------VWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGY 445 (571)
Q Consensus 372 ~~~~~~~l~~~G~~------v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~ 445 (571)
|..+.+.|+.-||. -+.+|.|-+-...+ .... -+..+...++...+.. ..++|.|++|||||.
T Consensus 126 w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e-----~rd~----yl~kLK~~iE~~~~~~--G~kkVvlisHSMG~l 194 (473)
T KOG2369|consen 126 WHELIENLVGIGYERGKTLFGAPYDWRLSYHNSE-----ERDQ----YLSKLKKKIETMYKLN--GGKKVVLISHSMGGL 194 (473)
T ss_pred HHHHHHHHHhhCcccCceeeccccchhhccCChh-----HHHH----HHHHHHHHHHHHHHHc--CCCceEEEecCCccH
Confidence 45567788888887 34456663211100 0000 1333444454444432 348999999999999
Q ss_pred HHHHHHhcCCC
Q 008274 446 LSAITLARFPD 456 (571)
Q Consensus 446 ~a~~~~~~~~~ 456 (571)
+...++..+++
T Consensus 195 ~~lyFl~w~~~ 205 (473)
T KOG2369|consen 195 YVLYFLKWVEA 205 (473)
T ss_pred HHHHHHhcccc
Confidence 99999887766
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=89.78 E-value=0.3 Score=50.50 Aligned_cols=73 Identities=10% Similarity=0.005 Sum_probs=42.0
Q ss_pred hhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh-ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHH
Q 008274 373 DMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK-HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITL 451 (571)
Q Consensus 373 ~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~ 451 (571)
..+.+.|++.||. -.+.+|.. -+|+.+.. .+..+.-+..+...|+.+.+.. ...++.|+||||||.+++.++
T Consensus 159 ~kLIe~L~~iGY~--~~nL~gAP---YDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 159 AVLIANLARIGYE--EKNMYMAA---YDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred HHHHHHHHHcCCC--CCceeecc---cccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHH
Confidence 5578899999997 34554332 12221110 0000011233445555444432 257999999999999999887
Q ss_pred h
Q 008274 452 A 452 (571)
Q Consensus 452 ~ 452 (571)
.
T Consensus 232 ~ 232 (642)
T PLN02517 232 K 232 (642)
T ss_pred H
Confidence 6
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.77 E-value=0.48 Score=47.11 Aligned_cols=37 Identities=19% Similarity=0.151 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
.+.+.++.++++..-..-+|.+.|||+||.+|+.+|.
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3556666666653111247999999999999998875
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.64 E-value=1.2 Score=45.17 Aligned_cols=115 Identities=14% Similarity=0.092 Sum_probs=62.0
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccc------------cccchhhhHHHHhCCcEEEEECCC-CCCCCh
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW------------INTVDMRAQYLRSKGILVWKLDNR-GTARRG 398 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~------------~~~~~~~~~~l~~~G~~v~~~d~r-G~~~~~ 398 (571)
..+|.+.++. ++.+.|+++++-|||+.+.+...+ .+.+...-..|.++ -.+|.+|.| |.|.+-
T Consensus 87 ~ffy~fe~~n---dp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~ 162 (498)
T COG2939 87 FFFYTFESPN---DPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSR 162 (498)
T ss_pred EEEEEecCCC---CCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCccc
Confidence 5566666533 236789999999999987644333 11110001122222 246777844 555443
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHc-CC--CcCCcEEEEeechHHHHHHHHHh
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GL--AKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~--~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
. -..+...+. ...-+|+..+.+.+.+. +. -...+..|+|.||||+-+..+|.
T Consensus 163 a-~~~e~~~d~-~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 163 A-LGDEKKKDF-EGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred c-cccccccch-hccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHH
Confidence 1 111111111 11245666666655443 11 13358999999999998876664
|
|
| >COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=89.56 E-value=17 Score=33.46 Aligned_cols=66 Identities=17% Similarity=0.103 Sum_probs=43.1
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe--EEEEEEeccCccEEEEEEECCCCceEEEEEe
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI--LTAQVLNRSQTKLKVLKFDIKTGQRKVILVE 152 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~ 152 (571)
..|.+|||.+.+.+.+... ..........|--.|+ -|+..++|.++...+|.+|.+.+..+.|+..
T Consensus 77 ~Gl~VYDLsGkqLqs~~~G-------k~NNVDLrygF~LgG~~idiaaASdR~~~~i~~y~Idp~~~~L~sitD~ 144 (364)
T COG4247 77 AGLRVYDLSGKQLQSVNPG-------KYNNVDLRYGFQLGGQSIDIAAASDRQNDKIVFYKIDPNPQYLESITDS 144 (364)
T ss_pred CCeEEEecCCCeeeecCCC-------cccccccccCcccCCeEEEEEecccccCCeEEEEEeCCCccceeeccCC
Confidence 3578999999877665331 1111122223445565 4667788888888999999999776666553
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=89.52 E-value=22 Score=34.67 Aligned_cols=115 Identities=11% Similarity=0.048 Sum_probs=61.5
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-------cCCeeeccCCcccCCCCC-cc--CCCeEEEE
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-------LDSWVNLHDCFTPLDKGV-TK--YSGGFIWA 181 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-------~~~w~~~~~~~~~~~~~~-~~--~~d~~~~~ 181 (571)
..+.++.++..++|.+-.+ .||..|+.+.+++..-.-+ ..+|-+. .+.+ .. ..+.++++
T Consensus 187 ~~~~~~~~~~~~~F~Sy~G----~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPG-------G~Q~~A~~~~~~rlyvL 255 (342)
T PF06433_consen 187 EHPAYSRDGGRLYFVSYEG----NVYSADLSGDSAKFGKPWSLLTDAEKADGWRPG-------GWQLIAYHAASGRLYVL 255 (342)
T ss_dssp S--EEETTTTEEEEEBTTS----EEEEEEETTSSEEEEEEEESS-HHHHHTTEEE--------SSS-EEEETTTTEEEEE
T ss_pred cccceECCCCeEEEEecCC----EEEEEeccCCcccccCcccccCccccccCcCCc-------ceeeeeeccccCeEEEE
Confidence 3445555444445544333 4899999888766543211 2355543 3321 11 23446666
Q ss_pred Eec-------CCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 182 SEK-------TGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 182 s~~-------~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
..+ ++-.+||.+|+.+++. .++.-+. .+.++ .++.|.+=++|..+... ..|+.++.
T Consensus 256 Mh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~-~~~Si-~Vsqd~~P~L~~~~~~~---~~l~v~D~ 319 (342)
T PF06433_consen 256 MHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEH-PIDSI-AVSQDDKPLLYALSAGD---GTLDVYDA 319 (342)
T ss_dssp EEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEE-EESEE-EEESSSS-EEEEEETTT---TEEEEEET
T ss_pred ecCCCCCCccCCceEEEEEECCCCeEEEEEeCCC-ccceE-EEccCCCcEEEEEcCCC---CeEEEEeC
Confidence 544 2348999999988763 3443222 33344 48888886666655433 45777776
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.49 E-value=18 Score=33.62 Aligned_cols=147 Identities=13% Similarity=0.191 Sum_probs=71.5
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecCC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTG 186 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g 186 (571)
...+-.++|||.|++++..+-... ..+.--..++-..+...++.. .+. . ..+|+.++ ++.+..|+-
T Consensus 61 krsVRsvAwsp~g~~La~aSFD~t----~~Iw~k~~~efecv~~lEGHE-nEV-K-------~Vaws~sG~~LATCSRDK 127 (312)
T KOG0645|consen 61 KRSVRSVAWSPHGRYLASASFDAT----VVIWKKEDGEFECVATLEGHE-NEV-K-------CVAWSASGNYLATCSRDK 127 (312)
T ss_pred hheeeeeeecCCCcEEEEeeccce----EEEeecCCCceeEEeeeeccc-cce-e-------EEEEcCCCCEEEEeeCCC
Confidence 356777999999997776654331 222222344444433322110 000 0 01344555 666655544
Q ss_pred ccEEEEEeCCCce---eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc-e
Q 008274 187 FRHLYLHDINGTC---LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG-K 262 (571)
Q Consensus 187 ~~~l~~~~~~~~~---~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g-~ 262 (571)
---||.++ ++.+ ...|+...-+|.... |.|.-. |.|+..-++. ..+|+-....+.. -...|..-.+ .
T Consensus 128 SVWiWe~d-eddEfec~aVL~~HtqDVK~V~-WHPt~d-lL~S~SYDnT--Ik~~~~~~dddW~----c~~tl~g~~~TV 198 (312)
T KOG0645|consen 128 SVWIWEID-EDDEFECIAVLQEHTQDVKHVI-WHPTED-LLFSCSYDNT--IKVYRDEDDDDWE----CVQTLDGHENTV 198 (312)
T ss_pred eEEEEEec-CCCcEEEEeeeccccccccEEE-EcCCcc-eeEEeccCCe--EEEEeecCCCCee----EEEEecCccceE
Confidence 33344454 2222 344555555677665 888655 5555554442 7777765311111 1112222111 2
Q ss_pred EEEEECCCCCEEEE
Q 008274 263 HVAVLDHNMRNFVD 276 (571)
Q Consensus 263 ~~~~~s~~g~~~v~ 276 (571)
-...|.+.|..++-
T Consensus 199 W~~~F~~~G~rl~s 212 (312)
T KOG0645|consen 199 WSLAFDNIGSRLVS 212 (312)
T ss_pred EEEEecCCCceEEE
Confidence 33477888866543
|
|
| >KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.36 E-value=13 Score=37.85 Aligned_cols=23 Identities=13% Similarity=0.157 Sum_probs=18.5
Q ss_pred CCCceeEEEEEccCCeEEEEEEe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLN 128 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~ 128 (571)
.....+..++|.|++..++|+..
T Consensus 143 Q~~~~v~c~~W~p~S~~vl~c~g 165 (737)
T KOG1524|consen 143 QNEESIRCARWAPNSNSIVFCQG 165 (737)
T ss_pred hcCceeEEEEECCCCCceEEecC
Confidence 45667888999999998888853
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.34 E-value=0.53 Score=47.45 Aligned_cols=35 Identities=26% Similarity=0.265 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
.+...++.+.++. ...++.+.|||+||.+|..+++
T Consensus 269 ~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 3555566555543 3468999999999999998874
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=89.24 E-value=0.93 Score=39.73 Aligned_cols=50 Identities=18% Similarity=0.157 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEE-EcCc
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAV-SGAP 466 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v-~~~~ 466 (571)
++..+++-|.... ....++.++|||||..++..++...+..+..++ ..+|
T Consensus 93 ~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 93 RLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 3444444443332 356799999999999999988876444444433 3444
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.94 E-value=0.58 Score=47.60 Aligned_cols=39 Identities=18% Similarity=0.182 Sum_probs=27.8
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
+++.+.++.+.++..-..-+|.|.|||+||.+|+.++..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 456666777666532122479999999999999988754
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=88.85 E-value=20 Score=33.29 Aligned_cols=131 Identities=11% Similarity=0.009 Sum_probs=69.4
Q ss_pred EEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCC--CCceeEEEEEEeCCCCCCCCCCCeEecCCC-ceEEEE
Q 008274 190 LYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLD--GPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAV 266 (571)
Q Consensus 190 l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~--~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~-g~~~~~ 266 (571)
+-+.|.++|+....-.-.-.+... .|+.+|+++.++++.. ......++.+.-.+..........+++..+ -..++.
T Consensus 76 ~kLWDv~tGk~la~~k~~~~Vk~~-~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~ 154 (327)
T KOG0643|consen 76 AKLWDVETGKQLATWKTNSPVKRV-DFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSAL 154 (327)
T ss_pred eEEEEcCCCcEEEEeecCCeeEEE-eeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeee
Confidence 344555555433332223345555 4899999999998853 233455555442110000001133444333 334558
Q ss_pred ECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEcC
Q 008274 267 LDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQAN 327 (571)
Q Consensus 267 ~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (571)
|+|-+++++.-.++. .|..++..+|.+...-.. .-...+....+..-..+.++..
T Consensus 155 Wg~l~~~ii~Ghe~G----~is~~da~~g~~~v~s~~--~h~~~Ind~q~s~d~T~FiT~s 209 (327)
T KOG0643|consen 155 WGPLGETIIAGHEDG----SISIYDARTGKELVDSDE--EHSSKINDLQFSRDRTYFITGS 209 (327)
T ss_pred ecccCCEEEEecCCC----cEEEEEcccCceeeechh--hhccccccccccCCcceEEecc
Confidence 999999888766553 688888888765433211 1223455555555555555543
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.81 E-value=3.6 Score=43.76 Aligned_cols=126 Identities=8% Similarity=-0.076 Sum_probs=62.8
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE---EEEEeecCCee
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK---VILVEELDSWV 158 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~---~l~~~~~~~w~ 158 (571)
+.+|++...++... ++-...++.++++|||+..+.=+-.+ ....+++.+-+.. .|.......-.
T Consensus 434 vRiWsI~d~~Vv~W---------~Dl~~lITAvcy~PdGk~avIGt~~G----~C~fY~t~~lk~~~~~~I~~~~~Kk~~ 500 (712)
T KOG0283|consen 434 VRLWSISDKKVVDW---------NDLRDLITAVCYSPDGKGAVIGTFNG----YCRFYDTEGLKLVSDFHIRLHNKKKKQ 500 (712)
T ss_pred eEEeecCcCeeEee---------hhhhhhheeEEeccCCceEEEEEecc----EEEEEEccCCeEEEeeeEeeccCcccc
Confidence 55566665544322 34567899999999999554432222 2455555544322 11111100000
Q ss_pred e-ccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEE--EEEEEEeecCcEEEEEE
Q 008274 159 N-LHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMV--EQIVGVNEASGQVYFTG 227 (571)
Q Consensus 159 ~-~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~--~~~~~~s~dg~~l~~~~ 227 (571)
. .-..|++.+. .++.++++|++. +|.++|.........=+|.-.. ....+++.||++|+..+
T Consensus 501 ~~rITG~Q~~p~----~~~~vLVTSnDS---rIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~s 565 (712)
T KOG0283|consen 501 GKRITGLQFFPG----DPDEVLVTSNDS---RIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSAS 565 (712)
T ss_pred CceeeeeEecCC----CCCeEEEecCCC---ceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEee
Confidence 0 0012334321 355788877654 4667765333322222221111 12335888999999998
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.42 E-value=0.64 Score=46.76 Aligned_cols=35 Identities=26% Similarity=0.097 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
.+.+.++.+.++. ...++.+.|||+||.+|..+++
T Consensus 263 ~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHH
Confidence 3445555444432 3468999999999999988754
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=88.34 E-value=23 Score=37.54 Aligned_cols=112 Identities=11% Similarity=0.035 Sum_probs=60.7
Q ss_pred eeEEEEEccC---Ce-EEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecC
Q 008274 110 YLARVNWMHG---NI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT 185 (571)
Q Consensus 110 ~~~~~~wspD---g~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~ 185 (571)
.+..+...++ ++ .++++.... ..+...|.+++++......++..-++. ..+ ..+...++.++
T Consensus 235 ~~E~vv~l~~~~~~~~~~~~TaG~~---g~~~~~d~es~~~~~~~~~~~~~e~~~---~~~-----~~~~~~~l~vt--- 300 (775)
T KOG0319|consen 235 SLESVVRLREELGGKGEYIITAGGS---GVVQYWDSESGKCVYKQRQSDSEEIDH---LLA-----IESMSQLLLVT--- 300 (775)
T ss_pred heeeEEEechhcCCcceEEEEecCC---ceEEEEecccchhhhhhccCCchhhhc---cee-----ccccCceEEEE---
Confidence 4445556555 33 233333322 247788999988754433321100100 011 11222333333
Q ss_pred CccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 186 GFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 186 g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.-++|++++.+..++ ++|-...-++-+.-.|.|+.+.|++.+|-.. ..+|
T Consensus 301 aeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~---lr~y 351 (775)
T KOG0319|consen 301 AEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPE---LRLY 351 (775)
T ss_pred ccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCc---eEEE
Confidence 235788888776654 5666555566666668888899999887654 5666
|
|
| >PF09910 DUF2139: Uncharacterized protein conserved in archaea (DUF2139); InterPro: IPR016675 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=88.29 E-value=11 Score=35.62 Aligned_cols=106 Identities=11% Similarity=0.020 Sum_probs=69.8
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
++++.+|.+.++++.+=-+ +--....+.+-++.+-..|=...+.+.......+.-||.+|..+|+.+.|.+.+..
T Consensus 78 SHVH~yd~e~~~VrLLWke-sih~~~~WaGEVSdIlYdP~~D~LLlAR~DGh~nLGvy~ldr~~g~~~~L~~~ps~---- 152 (339)
T PF09910_consen 78 SHVHEYDTENDSVRLLWKE-SIHDKTKWAGEVSDILYDPYEDRLLLARADGHANLGVYSLDRRTGKAEKLSSNPSL---- 152 (339)
T ss_pred ceEEEEEcCCCeEEEEEec-ccCCccccccchhheeeCCCcCEEEEEecCCcceeeeEEEcccCCceeeccCCCCc----
Confidence 7899999999988765111 00011345566788889997778888877777777899999999999998764322
Q ss_pred ccCCcccCCCCCccCCCeEEEEEec--CCccEEEEEeCCCcee
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWASEK--TGFRHLYLHDINGTCL 200 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s~~--~g~~~l~~~~~~~~~~ 200 (571)
++ ..-.|..+|..+. .|.+.|..+|+.+++.
T Consensus 153 ---------KG-~~~~D~a~F~i~~~~~g~~~i~~~Dli~~~~ 185 (339)
T PF09910_consen 153 ---------KG-TLVHDYACFGINNFHKGVSGIHCLDLISGKW 185 (339)
T ss_pred ---------Cc-eEeeeeEEEeccccccCCceEEEEEccCCeE
Confidence 00 0112233333322 4567788888776655
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=88.25 E-value=22 Score=33.40 Aligned_cols=159 Identities=18% Similarity=0.176 Sum_probs=80.4
Q ss_pred EEEEecCCccEEEEEeCCCce-eeceeec-CeEEEEEEEEeecCcEEEEEEcCC--CCceeEEEEEEeCCCCCCCCCCCe
Q 008274 179 IWASEKTGFRHLYLHDINGTC-LGPITEG-DWMVEQIVGVNEASGQVYFTGTLD--GPLESHLYCAKLYPDWNHTLEAPV 254 (571)
Q Consensus 179 ~~~s~~~g~~~l~~~~~~~~~-~~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~--~~~~~~l~~~~l~~~g~~~~~~~~ 254 (571)
++...+.|. .-+++|.++.+ +..+++. ....-.--.+|+||.+||.+-+.- +.....+|...- .-. ..-+
T Consensus 83 vafARrPGt-f~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~--~fq---rvgE 156 (366)
T COG3490 83 VAFARRPGT-FAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDARE--GFQ---RVGE 156 (366)
T ss_pred EEEEecCCc-eEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccc--ccc---eecc
Confidence 333455442 24556665543 2333322 222211113899999999998853 333466666542 110 0111
Q ss_pred EecCCCceEEEEECCCCCEEEEEeeCC-CC-------------CCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCe
Q 008274 255 KLTNGKGKHVAVLDHNMRNFVDFHDSL-DS-------------PPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPD 320 (571)
Q Consensus 255 ~lt~~~g~~~~~~s~~g~~~v~~~s~~-~~-------------p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 320 (571)
--|.+-|-+.+++.+||+.+|..-..- +. -|.+.+++..+|..+.+.+ +.+ .......+
T Consensus 157 ~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~----Lp~---~l~~lSiR 229 (366)
T COG3490 157 FSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHT----LPA---SLRQLSIR 229 (366)
T ss_pred cccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhcc----Cch---hhhhccee
Confidence 224455778899999999887643311 11 1455555544555332221 111 12233444
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEc
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVY 356 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~h 356 (571)
.+.+. .||..+.+.-|.-+. ..+|.+|-.|
T Consensus 230 Hld~g-~dgtvwfgcQy~G~~-----~d~ppLvg~~ 259 (366)
T COG3490 230 HLDIG-RDGTVWFGCQYRGPR-----NDLPPLVGHF 259 (366)
T ss_pred eeeeC-CCCcEEEEEEeeCCC-----ccCCcceeec
Confidence 44444 478777777665433 2456555444
|
|
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.20 E-value=29 Score=34.47 Aligned_cols=77 Identities=16% Similarity=0.148 Sum_probs=41.7
Q ss_pred EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEE
Q 008274 210 VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRIL 288 (571)
Q Consensus 210 ~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~ 288 (571)
..... +.||| .|+-++..++ ...+| ++.+.. ...+.+...+ .-..+||.+|-|++..+... .+.
T Consensus 350 ~ts~~-fHpDg-Lifgtgt~d~--~vkiw--dlks~~-----~~a~Fpght~~vk~i~FsENGY~Lat~add~----~V~ 414 (506)
T KOG0289|consen 350 YTSAA-FHPDG-LIFGTGTPDG--VVKIW--DLKSQT-----NVAKFPGHTGPVKAISFSENGYWLATAADDG----SVK 414 (506)
T ss_pred eEEee-EcCCc-eEEeccCCCc--eEEEE--EcCCcc-----ccccCCCCCCceeEEEeccCceEEEEEecCC----eEE
Confidence 44443 89998 3555555554 35554 452221 2223332222 23458999998887766442 377
Q ss_pred EEEcCCCceeEec
Q 008274 289 LCSLQDGSLVLPL 301 (571)
Q Consensus 289 ~~~~~~~~~~~~l 301 (571)
+.|++.-+..+.+
T Consensus 415 lwDLRKl~n~kt~ 427 (506)
T KOG0289|consen 415 LWDLRKLKNFKTI 427 (506)
T ss_pred EEEehhhccccee
Confidence 7787554443333
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=88.14 E-value=2 Score=38.76 Aligned_cols=80 Identities=24% Similarity=0.057 Sum_probs=45.4
Q ss_pred hhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHH-HHHHHHHcCCCcCCcEEEEeechHHHHHHHHH
Q 008274 373 DMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLT-GAEWLIKQGLAKVGHIGLYGWSYGGYLSAITL 451 (571)
Q Consensus 373 ~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~ 451 (571)
..+...+. ..+.|+.++.+|.+..... ....+++.. .+..+... ....++.++|||+||.++..++
T Consensus 16 ~~~~~~l~-~~~~v~~~~~~g~~~~~~~----------~~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s~Gg~~a~~~a 82 (212)
T smart00824 16 ARLAAALR-GRRDVSALPLPGFGPGEPL----------PASADALVEAQAEAVLRA--AGGRPFVLVGHSSGGLLAHAVA 82 (212)
T ss_pred HHHHHhcC-CCccEEEecCCCCCCCCCC----------CCCHHHHHHHHHHHHHHh--cCCCCeEEEEECHHHHHHHHHH
Confidence 33445554 3689999999987532210 011222222 22223222 1345789999999999998777
Q ss_pred hc---CCCeeEEEEEcC
Q 008274 452 AR---FPDVFQCAVSGA 465 (571)
Q Consensus 452 ~~---~~~~~~~~v~~~ 465 (571)
.+ .+..+...+...
T Consensus 83 ~~l~~~~~~~~~l~~~~ 99 (212)
T smart00824 83 ARLEARGIPPAAVVLLD 99 (212)
T ss_pred HHHHhCCCCCcEEEEEc
Confidence 64 344455555443
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.84 E-value=8.7 Score=37.65 Aligned_cols=120 Identities=9% Similarity=0.109 Sum_probs=69.7
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC----Ce
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD----SW 157 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~----~w 157 (571)
|..||+.++..+.. -+..+-+..+.-++||..+... .|+. .+-++|+.+.+.+........ .|
T Consensus 324 vRfwD~Rs~~~~~s---------v~~gg~vtSl~ls~~g~~lLss-sRDd---tl~viDlRt~eI~~~~sA~g~k~asDw 390 (459)
T KOG0288|consen 324 VRFWDIRSADKTRS---------VPLGGRVTSLDLSMDGLELLSS-SRDD---TLKVIDLRTKEIRQTFSAEGFKCASDW 390 (459)
T ss_pred eEEEeccCCceeeE---------eecCcceeeEeeccCCeEEeee-cCCC---ceeeeecccccEEEEeecccccccccc
Confidence 66677666544332 1245578889999999855544 4443 278889999888776554322 12
Q ss_pred eeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeec-Ce--EEEEEEEEeecCcEEEEEEc
Q 008274 158 VNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEG-DW--MVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~-~~--~~~~~~~~s~dg~~l~~~~~ 228 (571)
.-. ..+||+ ++....-+| .||+.+..+++.+..-+. .- .+..+ .|++.|+.+.-...
T Consensus 391 trv-----------vfSpd~~YvaAGS~dg--sv~iW~v~tgKlE~~l~~s~s~~aI~s~-~W~~sG~~Llsadk 451 (459)
T KOG0288|consen 391 TRV-----------VFSPDGSYVAAGSADG--SVYIWSVFTGKLEKVLSLSTSNAAITSL-SWNPSGSGLLSADK 451 (459)
T ss_pred cee-----------EECCCCceeeeccCCC--cEEEEEccCceEEEEeccCCCCcceEEE-EEcCCCchhhcccC
Confidence 211 234554 444433344 467777777776544332 11 24444 49998877665443
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.66 E-value=0.71 Score=46.97 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh
Q 008274 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 416 D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
.+...++.+.++. ...++.+.|||+||.+|..+++
T Consensus 306 ~v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHH
Confidence 3556666666553 3468999999999999998864
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=87.50 E-value=1.4 Score=38.98 Aligned_cols=75 Identities=15% Similarity=0.142 Sum_probs=40.5
Q ss_pred CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc--C----CC
Q 008274 383 GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR--F----PD 456 (571)
Q Consensus 383 G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~--~----~~ 456 (571)
...+..++|+-..... .+...... ...++...++....+ ....+++|+|+|.|+.++..++.. . .+
T Consensus 39 ~~~~~~V~YpA~~~~~-~y~~S~~~-----G~~~~~~~i~~~~~~--CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~ 110 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN-SYGDSVAA-----GVANLVRLIEEYAAR--CPNTKIVLAGYSQGAMVVGDALSGDGLPPDVAD 110 (179)
T ss_dssp EEEEEE--S---SCGG-SCHHHHHH-----HHHHHHHHHHHHHHH--STTSEEEEEEETHHHHHHHHHHHHTTSSHHHHH
T ss_pred eeEEEecCCCCCCCcc-cccccHHH-----HHHHHHHHHHHHHHh--CCCCCEEEEecccccHHHHHHHHhccCChhhhh
Confidence 3566667888543321 11111110 034455555554444 245799999999999999999876 1 23
Q ss_pred eeEEEEEcC
Q 008274 457 VFQCAVSGA 465 (571)
Q Consensus 457 ~~~~~v~~~ 465 (571)
++.+++++.
T Consensus 111 ~I~avvlfG 119 (179)
T PF01083_consen 111 RIAAVVLFG 119 (179)
T ss_dssp HEEEEEEES
T ss_pred hEEEEEEec
Confidence 566666543
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=87.27 E-value=0.85 Score=46.58 Aligned_cols=38 Identities=21% Similarity=0.176 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHcCC---C-cCCcEEEEeechHHHHHHHHHh
Q 008274 415 EDQLTGAEWLIKQGL---A-KVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~---~-d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+++.+.++.+.+... - ..-+|.+.|||+||.+|+.++.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 446667777765421 1 2347999999999999998874
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.23 E-value=0.85 Score=46.62 Aligned_cols=38 Identities=26% Similarity=0.278 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHHcCCC---cCCcEEEEeechHHHHHHHHHh
Q 008274 415 EDQLTGAEWLIKQGLA---KVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~---d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+.+.+.++.+.++... ..-+|.|.|||+||.+|+.+|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 4456667776664311 1358999999999999998874
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=87.17 E-value=35 Score=34.33 Aligned_cols=163 Identities=12% Similarity=0.058 Sum_probs=83.9
Q ss_pred EEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccC
Q 008274 83 GVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHD 162 (571)
Q Consensus 83 ~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~ 162 (571)
-.||++++.. +.++ .+...|+-...|+|-...+++.-.-++ . |-..|+.+-..+. .+-..+
T Consensus 136 k~~d~s~a~v-~~~l-------~~htDYVR~g~~~~~~~hivvtGsYDg-~--vrl~DtR~~~~~v-~elnhg------- 196 (487)
T KOG0310|consen 136 KYWDLSTAYV-QAEL-------SGHTDYVRCGDISPANDHIVVTGSYDG-K--VRLWDTRSLTSRV-VELNHG------- 196 (487)
T ss_pred EEEEcCCcEE-EEEe-------cCCcceeEeeccccCCCeEEEecCCCc-e--EEEEEeccCCcee-EEecCC-------
Confidence 4578888775 5555 356779999999998887777644443 2 4555555443222 221111
Q ss_pred CcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceee---cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 163 CFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITE---GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 163 ~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
.|+.......+.+++..+ |-+.+-++|+.+|. +.++. ..-.+.... +..++..|+-. ..++. ..+|.
T Consensus 197 --~pVe~vl~lpsgs~iasA---gGn~vkVWDl~~G~-qll~~~~~H~KtVTcL~-l~s~~~rLlS~-sLD~~--VKVfd 266 (487)
T KOG0310|consen 197 --CPVESVLALPSGSLIASA---GGNSVKVWDLTTGG-QLLTSMFNHNKTVTCLR-LASDSTRLLSG-SLDRH--VKVFD 266 (487)
T ss_pred --CceeeEEEcCCCCEEEEc---CCCeEEEEEecCCc-eehhhhhcccceEEEEE-eecCCceEeec-ccccc--eEEEE
Confidence 111111011122343332 55667777866332 12222 334566554 55567555443 33332 55555
Q ss_pred EEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCC
Q 008274 240 AKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSL 281 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~ 281 (571)
.+ +.+ -.-...-....-+..+|||+..+|.-.++.
T Consensus 267 ~t---~~K----vv~s~~~~~pvLsiavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 267 TT---NYK----VVHSWKYPGPVLSIAVSPDDQTVVIGMSNG 301 (487)
T ss_pred cc---ceE----EEEeeecccceeeEEecCCCceEEEecccc
Confidence 21 111 111122222345678999999988877764
|
|
| >KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=86.95 E-value=32 Score=35.70 Aligned_cols=50 Identities=18% Similarity=0.078 Sum_probs=32.6
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEE-EEEeccCccEEEEEEECCCC
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTA-QVLNRSQTKLKVLKFDIKTG 144 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~-~~~~r~~~~~~i~~~d~~~g 144 (571)
+.+|-+.||.-.+.. ..+..+..++|+|.++.-+ .++... .++++|..-|
T Consensus 424 vriWEi~TgRcvr~~---------~~d~~I~~vaw~P~~~~~vLAvA~~~----~~~ivnp~~G 474 (733)
T KOG0650|consen 424 VRIWEIATGRCVRTV---------QFDSEIRSVAWNPLSDLCVLAVAVGE----CVLIVNPIFG 474 (733)
T ss_pred EEEEEeecceEEEEE---------eecceeEEEEecCCCCceeEEEEecC----ceEEeCcccc
Confidence 567788887654432 2456788899999998433 232222 1788888877
|
|
| >KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=86.57 E-value=10 Score=36.56 Aligned_cols=159 Identities=9% Similarity=0.116 Sum_probs=82.2
Q ss_pred EEEEEECCCC-ceEEEeccCCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceE--EEEEeecCC
Q 008274 81 RLGVVSAAGG-PVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRK--VILVEELDS 156 (571)
Q Consensus 81 ~l~~~dl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~--~l~~~~~~~ 156 (571)
++-+||..-. ..+.+++ +-..+..+.++|-.. +|+.+.... .|+++|+.++... .+.....+
T Consensus 168 ~i~IWD~~R~~Pv~smsw---------G~Dti~svkfNpvETsILas~~sDr----sIvLyD~R~~~Pl~KVi~~mRTN- 233 (433)
T KOG0268|consen 168 QIDIWDEQRDNPVSSMSW---------GADSISSVKFNPVETSILASCASDR----SIVLYDLRQASPLKKVILTMRTN- 233 (433)
T ss_pred eeeecccccCCccceeec---------CCCceeEEecCCCcchheeeeccCC----ceEEEecccCCccceeeeecccc-
Confidence 4566776643 3334433 233556688888776 455442222 2999999988743 22222222
Q ss_pred eeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCce-eeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCce
Q 008274 157 WVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLE 234 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~-~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~ 234 (571)
+.+|+|..|.|++-.+ -.+||.+|.-.-+ +..+-.+.- .+-+. -+||-|+.++-.+-+..
T Consensus 234 -------------~IswnPeafnF~~a~E-D~nlY~~DmR~l~~p~~v~~dhvsAV~dV-dfsptG~EfvsgsyDks--- 295 (433)
T KOG0268|consen 234 -------------TICWNPEAFNFVAANE-DHNLYTYDMRNLSRPLNVHKDHVSAVMDV-DFSPTGQEFVSGSYDKS--- 295 (433)
T ss_pred -------------ceecCccccceeeccc-cccceehhhhhhcccchhhcccceeEEEe-ccCCCcchhccccccce---
Confidence 1256676677765443 3468888843211 111222211 23333 48888877665554433
Q ss_pred eEEEEEEeCCCCCCCCCCCeEecCC---CceEEEEECCCCCEEEEEeeC
Q 008274 235 SHLYCAKLYPDWNHTLEAPVKLTNG---KGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 235 ~~l~~~~l~~~g~~~~~~~~~lt~~---~g~~~~~~s~~g~~~v~~~s~ 280 (571)
-.||.++- + .-+.+... .....+.+|.|.+++ ++.|.
T Consensus 296 IRIf~~~~---~-----~SRdiYhtkRMq~V~~Vk~S~Dskyi-~SGSd 335 (433)
T KOG0268|consen 296 IRIFPVNH---G-----HSRDIYHTKRMQHVFCVKYSMDSKYI-ISGSD 335 (433)
T ss_pred EEEeecCC---C-----cchhhhhHhhhheeeEEEEeccccEE-EecCC
Confidence 55665542 2 11222211 234556889998754 44443
|
|
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.56 E-value=8.6 Score=37.71 Aligned_cols=63 Identities=16% Similarity=0.053 Sum_probs=37.9
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEe
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE 152 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~ 152 (571)
|-++|+.+.+.+..-...+ .....-...+.|||||++++.-+... .||+.++.+|++..+.+.
T Consensus 365 l~viDlRt~eI~~~~sA~g----~k~asDwtrvvfSpd~~YvaAGS~dg----sv~iW~v~tgKlE~~l~~ 427 (459)
T KOG0288|consen 365 LKVIDLRTKEIRQTFSAEG----FKCASDWTRVVFSPDGSYVAAGSADG----SVYIWSVFTGKLEKVLSL 427 (459)
T ss_pred eeeeecccccEEEEeeccc----cccccccceeEECCCCceeeeccCCC----cEEEEEccCceEEEEecc
Confidence 4567777766553311100 11122356789999999766543322 399999999998665443
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=86.27 E-value=14 Score=36.54 Aligned_cols=138 Identities=10% Similarity=-0.021 Sum_probs=76.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~~ 159 (571)
.|.++|+.+++.+..... .....-+..++|+|-+..|+....-++ .|.+.|+..-.....+-+. ++.-
T Consensus 251 ~L~iwD~R~~~~~~~~~~------~ah~~~vn~~~fnp~~~~ilAT~S~D~---tV~LwDlRnL~~~lh~~e~H~dev-- 319 (422)
T KOG0264|consen 251 KLMIWDTRSNTSKPSHSV------KAHSAEVNCVAFNPFNEFILATGSADK---TVALWDLRNLNKPLHTFEGHEDEV-- 319 (422)
T ss_pred eEEEEEcCCCCCCCcccc------cccCCceeEEEeCCCCCceEEeccCCC---cEEEeechhcccCceeccCCCcce--
Confidence 689999986422111110 123556777899997774444433332 3888888765543332221 1110
Q ss_pred ccCCcccCCCCCccCCC--eEEEEEecCCccEEEEEeCCCce----------eec-eeec--CeEEEEEEEEeecCcEEE
Q 008274 160 LHDCFTPLDKGVTKYSG--GFIWASEKTGFRHLYLHDINGTC----------LGP-ITEG--DWMVEQIVGVNEASGQVY 224 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d--~~~~~s~~~g~~~l~~~~~~~~~----------~~~-lT~~--~~~~~~~~~~s~dg~~l~ 224 (571)
|+- .|+|. .++..|..++.-++|-+..-+.+ ++. ++-+ ..-+.++. |+|...++.
T Consensus 320 ----~~V-----~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~Dfs-Wnp~ePW~I 389 (422)
T KOG0264|consen 320 ----FQV-----EWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFS-WNPNEPWTI 389 (422)
T ss_pred ----EEE-----EeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCccccccccc-CCCCCCeEE
Confidence 111 23333 46666666666666665533322 121 2221 22345564 999999999
Q ss_pred EEEcCCCCceeEEEEEE
Q 008274 225 FTGTLDGPLESHLYCAK 241 (571)
Q Consensus 225 ~~~~~~~~~~~~l~~~~ 241 (571)
.+...++. .||+.+.
T Consensus 390 ~SvaeDN~--LqIW~~s 404 (422)
T KOG0264|consen 390 ASVAEDNI--LQIWQMA 404 (422)
T ss_pred EEecCCce--EEEeecc
Confidence 99888874 8999876
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.14 E-value=1 Score=44.77 Aligned_cols=38 Identities=16% Similarity=0.181 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHcCC-C-cCCcEEEEeechHHHHHHHHHhc
Q 008274 416 DQLTGAEWLIKQGL-A-KVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 416 D~~~~~~~l~~~~~-~-d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
.+.+.++.|.+... . ...+|.|.|||+||.+|+.++..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34555666554321 1 23479999999999999888753
|
|
| >KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown] | Back alignment and domain information |
|---|
Probab=85.99 E-value=10 Score=38.17 Aligned_cols=90 Identities=14% Similarity=0.069 Sum_probs=53.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.++|.++.....+.. + ...++.+.+||||..++.-+..+ ...||+++..+-...++-+... ..+
T Consensus 429 ~w~V~d~e~~~lv~~~~--------d-~~~ls~v~ysp~G~~lAvgs~d~--~iyiy~Vs~~g~~y~r~~k~~g-s~i-- 494 (626)
T KOG2106|consen 429 RWFVLDTETQDLVTIHT--------D-NEQLSVVRYSPDGAFLAVGSHDN--HIYIYRVSANGRKYSRVGKCSG-SPI-- 494 (626)
T ss_pred eEEEEecccceeEEEEe--------c-CCceEEEEEcCCCCEEEEecCCC--eEEEEEECCCCcEEEEeeeecC-cee--
Confidence 45677777755444432 3 67888999999999888876554 4456777766655555544322 111
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYL 192 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~ 192 (571)
..+ .|+.|+=++.++..++.=||-
T Consensus 495 ----thL----DwS~Ds~~~~~~S~d~eiLyW 518 (626)
T KOG2106|consen 495 ----THL----DWSSDSQFLVSNSGDYEILYW 518 (626)
T ss_pred ----EEe----eecCCCceEEeccCceEEEEE
Confidence 111 466776555555555544444
|
|
| >KOG2048 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.79 E-value=40 Score=35.51 Aligned_cols=57 Identities=12% Similarity=0.147 Sum_probs=34.4
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 149 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l 149 (571)
|-+|++..+=-....+. .+.+..+...+|++.|++ |...-+ ..|...|+.+++.+.-
T Consensus 49 IEiwN~~~~w~~~~vi~------g~~drsIE~L~W~e~~RL--FS~g~s---g~i~EwDl~~lk~~~~ 105 (691)
T KOG2048|consen 49 IEIWNLSNNWFLEPVIH------GPEDRSIESLAWAEGGRL--FSSGLS---GSITEWDLHTLKQKYN 105 (691)
T ss_pred EEEEccCCCceeeEEEe------cCCCCceeeEEEccCCeE--EeecCC---ceEEEEecccCceeEE
Confidence 45566665433333333 235678888999977763 333322 2488889888876543
|
|
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=85.70 E-value=31 Score=32.29 Aligned_cols=151 Identities=12% Similarity=0.016 Sum_probs=73.9
Q ss_pred EEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEE
Q 008274 113 RVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYL 192 (571)
Q Consensus 113 ~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~ 192 (571)
.+.-+|||. +.|..+. ...|=.+|..+|+.++.--.+.. .+.+- ...+|+-.|+.+. |. -|-+
T Consensus 66 dvapapdG~-VWft~qg---~gaiGhLdP~tGev~~ypLg~Ga-----~Phgi------v~gpdg~~Witd~-~~-aI~R 128 (353)
T COG4257 66 DVAPAPDGA-VWFTAQG---TGAIGHLDPATGEVETYPLGSGA-----SPHGI------VVGPDGSAWITDT-GL-AIGR 128 (353)
T ss_pred ccccCCCCc-eEEecCc---cccceecCCCCCceEEEecCCCC-----CCceE------EECCCCCeeEecC-cc-eeEE
Confidence 456788985 3443322 22488999999998765322211 01110 1134553444333 22 6778
Q ss_pred EeCCCceeeceee--c--CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEEC
Q 008274 193 HDINGTCLGPITE--G--DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLD 268 (571)
Q Consensus 193 ~~~~~~~~~~lT~--~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s 268 (571)
++.++.+.++.+- . +-..+..+ ++++|+ |+|+....-.....-++-.+ ++-..+.+.+-+.....
T Consensus 129 ~dpkt~evt~f~lp~~~a~~nlet~v-fD~~G~-lWFt~q~G~yGrLdPa~~~i---------~vfpaPqG~gpyGi~at 197 (353)
T COG4257 129 LDPKTLEVTRFPLPLEHADANLETAV-FDPWGN-LWFTGQIGAYGRLDPARNVI---------SVFPAPQGGGPYGICAT 197 (353)
T ss_pred ecCcccceEEeecccccCCCccccee-eCCCcc-EEEeeccccceecCcccCce---------eeeccCCCCCCcceEEC
Confidence 8877666554432 2 22334444 887774 78887643211111111111 11122233344555777
Q ss_pred CCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 269 HNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 269 ~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
|||..-+.+... ..|.++|..++
T Consensus 198 pdGsvwyaslag----naiaridp~~~ 220 (353)
T COG4257 198 PDGSVWYASLAG----NAIARIDPFAG 220 (353)
T ss_pred CCCcEEEEeccc----cceEEcccccC
Confidence 888643322211 24666665555
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=85.28 E-value=5.4 Score=37.00 Aligned_cols=101 Identities=14% Similarity=0.035 Sum_probs=53.4
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
+.|+|+ +||-..... +..+..+.+++.+ -|..|.+.+.- .| -...+..... +.+..+.+.+..
T Consensus 23 ~~P~ii-~HGigd~c~-----~~~~~~~~q~l~~~~g~~v~~leig-~g-~~~s~l~pl~--------~Qv~~~ce~v~~ 86 (296)
T KOG2541|consen 23 PVPVIV-WHGIGDSCS-----SLSMANLTQLLEELPGSPVYCLEIG-DG-IKDSSLMPLW--------EQVDVACEKVKQ 86 (296)
T ss_pred cCCEEE-EeccCcccc-----cchHHHHHHHHHhCCCCeeEEEEec-CC-cchhhhccHH--------HHHHHHHHHHhc
Confidence 468876 699433321 1233445566665 57888888753 22 1122221111 122333344443
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCC-eeEEEEEcC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGA 465 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-~~~~~v~~~ 465 (571)
.+. -.+.+.++|.|.||.++-.++..-++ .++-.|+.+
T Consensus 87 m~~-lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~ 125 (296)
T KOG2541|consen 87 MPE-LSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLG 125 (296)
T ss_pred chh-ccCceEEEEEccccHHHHHHHHhCCCCCcceeEecc
Confidence 332 24578999999999999877754322 234445443
|
|
| >KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.27 E-value=54 Score=34.63 Aligned_cols=18 Identities=6% Similarity=0.010 Sum_probs=14.3
Q ss_pred CCceEEECCCCCeEEEEE
Q 008274 24 RKTGYWWSLDSKFIAFTQ 41 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~ 41 (571)
....+.+-|||..|..+.
T Consensus 14 ci~d~afkPDGsqL~lAA 31 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA 31 (1081)
T ss_pred chheeEECCCCceEEEec
Confidence 456788999999987754
|
|
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=85.25 E-value=6.6 Score=36.89 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=32.0
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeec
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEEL 154 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~ 154 (571)
.+..+..++||-||..++...-..+ +-+.|+++|+..++--+..
T Consensus 71 ~~~PvL~v~WsddgskVf~g~~Dk~----~k~wDL~S~Q~~~v~~Hd~ 114 (347)
T KOG0647|consen 71 HDGPVLDVCWSDDGSKVFSGGCDKQ----AKLWDLASGQVSQVAAHDA 114 (347)
T ss_pred cCCCeEEEEEccCCceEEeeccCCc----eEEEEccCCCeeeeeeccc
Confidence 4567778999999976655544443 7778999999888765543
|
|
| >KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown] | Back alignment and domain information |
|---|
Probab=84.86 E-value=35 Score=32.12 Aligned_cols=172 Identities=13% Similarity=0.116 Sum_probs=84.0
Q ss_pred CCceeEEEEEc--cCCe-EEEEEE--eccCccEEEEEEECCCCceEEEEE--ee----cCCeeeccCCcccCCCCCccCC
Q 008274 107 DEEYLARVNWM--HGNI-LTAQVL--NRSQTKLKVLKFDIKTGQRKVILV--EE----LDSWVNLHDCFTPLDKGVTKYS 175 (571)
Q Consensus 107 ~~~~~~~~~ws--pDg~-~i~~~~--~r~~~~~~i~~~d~~~g~~~~l~~--~~----~~~w~~~~~~~~~~~~~~~~~~ 175 (571)
..+.+....|| ||.+ +++.-+ ....+..+|...|.++|+...... .+ .-.|+++.... .+
T Consensus 43 ap~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~---------~p 113 (364)
T KOG0290|consen 43 APWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGV---------YP 113 (364)
T ss_pred CCCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCcccc---------Cc
Confidence 45566677898 6766 566543 233356688888988887654321 10 01233321111 11
Q ss_pred CeEEEEEecCCccEEEEEeCCCce---------------eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEE
Q 008274 176 GGFIWASEKTGFRHLYLHDINGTC---------------LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCA 240 (571)
Q Consensus 176 d~~~~~s~~~g~~~l~~~~~~~~~---------------~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 240 (571)
| ++.. .+.+-+||++..+..+ ..+||+-+|... |-++|-.++-+.- --+|-+
T Consensus 114 d-lLAT--s~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~-------dp~~igtSSiDTT---CTiWdi 180 (364)
T KOG0290|consen 114 D-LLAT--SSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEV-------DPNLIGTSSIDTT---CTIWDI 180 (364)
T ss_pred c-hhhc--ccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccC-------CcceeEeecccCe---EEEEEE
Confidence 1 1211 1234556666543222 234554444221 2244444433322 344443
Q ss_pred EeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCC
Q 008274 241 KLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPL 306 (571)
Q Consensus 241 ~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~ 306 (571)
.. +-.+. .+.+.+..+...+...|+.++..+..+++..+ .+..+|+..-+....+++...
T Consensus 181 e~--~~~~~-vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDG---SvRmFDLR~leHSTIIYE~p~ 240 (364)
T KOG0290|consen 181 ET--GVSGT-VKTQLIAHDKEVYDIAFLKGSRDVFASVGADG---SVRMFDLRSLEHSTIIYEDPS 240 (364)
T ss_pred ee--ccccc-eeeEEEecCcceeEEEeccCccceEEEecCCC---cEEEEEecccccceEEecCCC
Confidence 32 11111 14455666767777788887766655554433 455666665555555655444
|
|
| >PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function | Back alignment and domain information |
|---|
Probab=84.47 E-value=33 Score=36.12 Aligned_cols=43 Identities=9% Similarity=0.076 Sum_probs=28.4
Q ss_pred ecCCccEEEEEeCCCceeeceeec--CeEEEEEEEEeecCcEEEEEE
Q 008274 183 EKTGFRHLYLHDINGTCLGPITEG--DWMVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~~~lT~~--~~~~~~~~~~s~dg~~l~~~~ 227 (571)
...|.. ++..+...++.+++..+ .-++..+. |+||++.||+.-
T Consensus 476 ~~~G~~-~~~~~~~~g~~~rf~~~P~gaE~tG~~-fspDg~tlFvni 520 (524)
T PF05787_consen 476 RNDGNN-VWAYDPDTGELKRFLVGPNGAEITGPC-FSPDGRTLFVNI 520 (524)
T ss_pred ecccce-eeeccccccceeeeccCCCCcccccce-ECCCCCEEEEEE
Confidence 334444 66667777777666543 34667775 999999988753
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=84.24 E-value=1.5 Score=44.84 Aligned_cols=38 Identities=26% Similarity=0.283 Sum_probs=27.0
Q ss_pred hhHHHHHHHHHHcCCC---cCCcEEEEeechHHHHHHHHHh
Q 008274 415 EDQLTGAEWLIKQGLA---KVGHIGLYGWSYGGYLSAITLA 452 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~---d~~~i~l~G~S~GG~~a~~~~~ 452 (571)
+++.+.++.+.++..- ..-+|.|.|||+||.+|+.+|.
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 3456667666654211 2347999999999999998874
|
|
| >PRK13614 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=84.05 E-value=63 Score=34.39 Aligned_cols=122 Identities=9% Similarity=-0.015 Sum_probs=59.8
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECC-CCceEEEEE-eecCCeeeccCCcccCCCCCccCCCe--EEEEEecC
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK-TGQRKVILV-EELDSWVNLHDCFTPLDKGVTKYSGG--FIWASEKT 185 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~-~g~~~~l~~-~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~~~ 185 (571)
.+..|+|.++| .++.+.+ . +...|.+.... +++...... .....|..... ..-+ ..+.|| +.++.+.+
T Consensus 384 ~Lt~PS~d~~g-~vWtv~~-g-~~~~vv~~~~~g~~~~~~~~~~~v~~~~l~g~~-I~~l----rvSrDG~R~Avi~~~~ 455 (573)
T PRK13614 384 TLTRPSFSPQD-WVWTAGP-G-GNGRIVAYRPTGVAEGAQAPTVTLTADWLAGRT-VKEL----RVSREGVRALVISEQN 455 (573)
T ss_pred CccCCcccCCC-CEEEeeC-C-CCceEEEEecCCCcccccccceeecccccCCCe-eEEE----EECCCccEEEEEEEeC
Confidence 46778999998 4443332 2 22245555543 222211111 11123543211 1111 124454 77777777
Q ss_pred CccEEEEEe---CCCceeeceeecC-----eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 186 GFRHLYLHD---INGTCLGPITEGD-----WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 186 g~~~l~~~~---~~~~~~~~lT~~~-----~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
|..+|++-. -.++.++.|+..- -.+.+.. |..++..++...... .+.+++.+.+
T Consensus 456 g~~~V~va~V~R~~~G~P~~L~~~~~~~~~~~~~sl~-W~~~~sl~V~~~~~~--~~~~~~~v~v 517 (573)
T PRK13614 456 GKSRVQVAGIVRNEDGTPRELTAPITLAADSDADTGA-WVGDSTVVVTKASAT--SNVVPELLSV 517 (573)
T ss_pred CccEEEEEEEEeCCCCCeEEccCceecccCCCcceeE-EcCCCEEEEEeccCC--CcceEEEEEe
Confidence 776677632 2345556666431 1334444 876666444444333 3477888887
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=83.99 E-value=1.1 Score=45.83 Aligned_cols=37 Identities=16% Similarity=0.174 Sum_probs=24.8
Q ss_pred HHHHHHHHHHcCC-C-cCCcEEEEeechHHHHHHHHHhc
Q 008274 417 QLTGAEWLIKQGL-A-KVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 417 ~~~~~~~l~~~~~-~-d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
+.+.++.+.+... . ..-+|.|.|||+||.+|+.+|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4455555554311 1 23479999999999999988753
|
|
| >PF15525 DUF4652: Domain of unknown function (DUF4652) | Back alignment and domain information |
|---|
Probab=83.98 E-value=12 Score=32.63 Aligned_cols=69 Identities=9% Similarity=0.107 Sum_probs=47.4
Q ss_pred ceEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC---ccEEEEEEECCCCceEEEEE
Q 008274 78 VKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ---TKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 78 ~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~---~~~~i~~~d~~~g~~~~l~~ 151 (571)
+...||+.|+.+++...+.+...+..+.+ -.+.|--|..+++.....-+ .-..||.+++.+|+...|+.
T Consensus 86 giGkIYIkn~~~~~~~~L~i~~~~~k~sP-----K~i~WiDD~~L~vIIG~a~GTvS~GGnLy~~nl~tg~~~~ly~ 157 (200)
T PF15525_consen 86 GIGKIYIKNLNNNNWWSLQIDQNEEKYSP-----KYIEWIDDNNLAVIIGYAHGTVSKGGNLYKYNLNTGNLTELYE 157 (200)
T ss_pred cceeEEEEecCCCceEEEEecCcccccCC-----ceeEEecCCcEEEEEccccceEccCCeEEEEEccCCceeEeee
Confidence 34579999999999988866532212222 23679999886665532222 23369999999999999976
|
|
| >PRK13613 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=83.51 E-value=69 Score=34.42 Aligned_cols=121 Identities=16% Similarity=0.101 Sum_probs=60.2
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEecCCc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASEKTGF 187 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~ 187 (571)
.+..|+|.++| .++.+ ++......+.++--.+|+...+.. .|+.... ..-+ ..++|+ +.++.++.|-
T Consensus 410 ~Lt~PS~d~~g-~vWtv-d~~~~~~~vl~v~~~~G~~~~V~~----~~l~g~~-I~~l----rvSrDG~RvAvv~~~~g~ 478 (599)
T PRK13613 410 RLTSPSWDGRG-DLWVV-DRDPADPRLLWLLQGDGEPVEVRT----PELDGHR-VVAV----RVARDGVRVALIVEKDGR 478 (599)
T ss_pred cccCCcCcCCC-CEEEe-cCCCCCceEEEEEcCCCcEEEeec----cccCCCE-eEEE----EECCCccEEEEEEecCCC
Confidence 46678999988 34333 343222233333333666544322 2443211 1111 224554 7777777666
Q ss_pred cEEEEEe--C-CCceeeceee------cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 188 RHLYLHD--I-NGTCLGPITE------GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 188 ~~l~~~~--~-~~~~~~~lT~------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
.+||+-- . .++. ..|+. +--.+.+.. |..++. |+..+...+ .+..++.+++ +|.
T Consensus 479 ~~v~va~V~R~~~G~-~~l~~~~~l~~~l~~v~~~~-W~~~~s-L~Vlg~~~~-~~~~v~~v~v--dG~ 541 (599)
T PRK13613 479 RSLQIGRIVRDAKAV-VSVEEFRSLAPELEDVTDMS-WAGDSQ-LVVLGREEG-GVQQARYVQV--DGS 541 (599)
T ss_pred cEEEEEEEEeCCCCc-EEeeccEEeccCCCccceeE-EcCCCE-EEEEeccCC-CCcceEEEec--CCc
Confidence 6665532 2 2232 34433 222344554 876665 555443332 3578999999 665
|
|
| >KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=83.27 E-value=56 Score=33.21 Aligned_cols=162 Identities=9% Similarity=0.055 Sum_probs=84.8
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCcc
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~ 188 (571)
..+..+.+.-...+|+.++..+ +|.+..++++....-.....+.-.- .-.|++ +...++.+...+|.-
T Consensus 122 stvt~v~YN~~DeyiAsvs~gG----diiih~~~t~~~tt~f~~~sgqsvR-ll~ys~-------skr~lL~~asd~G~V 189 (673)
T KOG4378|consen 122 STVTYVDYNNTDEYIASVSDGG----DIIIHGTKTKQKTTTFTIDSGQSVR-LLRYSP-------SKRFLLSIASDKGAV 189 (673)
T ss_pred ceeEEEEecCCcceeEEeccCC----cEEEEecccCccccceecCCCCeEE-Eeeccc-------ccceeeEeeccCCeE
Confidence 4555566665555777665444 4888888887654322222221110 001111 122244445556766
Q ss_pred EEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEEC
Q 008274 189 HLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLD 268 (571)
Q Consensus 189 ~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s 268 (571)
+||=+.--......+........++ +++|.+..|+.+-..+ -.|+..|..+.. -..+|+-..-...+.|+
T Consensus 190 tlwDv~g~sp~~~~~~~HsAP~~gi-cfspsne~l~vsVG~D----kki~~yD~~s~~-----s~~~l~y~~Plstvaf~ 259 (673)
T KOG4378|consen 190 TLWDVQGMSPIFHASEAHSAPCRGI-CFSPSNEALLVSVGYD----KKINIYDIRSQA-----STDRLTYSHPLSTVAFS 259 (673)
T ss_pred EEEeccCCCcccchhhhccCCcCcc-eecCCccceEEEeccc----ceEEEeeccccc-----ccceeeecCCcceeeec
Confidence 6665432222112222222223344 4888887777665444 456666652111 34566655555667999
Q ss_pred CCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 269 HNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 269 ~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
++|.+++.-. .-.+++.+|+...+
T Consensus 260 ~~G~~L~aG~----s~G~~i~YD~R~~k 283 (673)
T KOG4378|consen 260 ECGTYLCAGN----SKGELIAYDMRSTK 283 (673)
T ss_pred CCceEEEeec----CCceEEEEecccCC
Confidence 9998776543 33578888875443
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=83.18 E-value=54 Score=33.02 Aligned_cols=138 Identities=13% Similarity=0.055 Sum_probs=72.9
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.++|-.+++.... .. . +. .-..+..+|||+.++.... ....|..+|..+....+ -..... ...
T Consensus 141 ~vsvid~~t~~~~~~-~~------v-G~-~P~~~a~~p~g~~vyv~~~---~~~~v~vi~~~~~~v~~-~~~~~~--~~~ 205 (381)
T COG3391 141 TVSVIDAATNKVTAT-IP------V-GN-TPTGVAVDPDGNKVYVTNS---DDNTVSVIDTSGNSVVR-GSVGSL--VGV 205 (381)
T ss_pred eEEEEeCCCCeEEEE-Ee------c-CC-CcceEEECCCCCeEEEEec---CCCeEEEEeCCCcceec-cccccc--ccc
Confidence 457778777766544 21 1 11 1256889999986666542 23358888977665443 110000 000
Q ss_pred cCCcccCCCCCccCCCe-EEEEEec-CCccEEEEEeCCCceeece--eecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEK-TGFRHLYLHDINGTCLGPI--TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~-~g~~~l~~~~~~~~~~~~l--T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
.-.|. ....++++ .++..+. .....+..++...+..... +.+.. ...-...+|+|+.+|...... ..
T Consensus 206 --~~~P~--~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~----~~ 276 (381)
T COG3391 206 --GTGPA--GIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQG----GT 276 (381)
T ss_pred --CCCCc--eEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccC-CCCceeECCCCCEEEEEecCC----Ce
Confidence 00111 11234444 4444444 2236788888777654433 33332 112224889999999987652 44
Q ss_pred EEEEEe
Q 008274 237 LYCAKL 242 (571)
Q Consensus 237 l~~~~l 242 (571)
++.++.
T Consensus 277 V~vid~ 282 (381)
T COG3391 277 VSVIDG 282 (381)
T ss_pred EEEEeC
Confidence 555554
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=82.81 E-value=44 Score=31.70 Aligned_cols=76 Identities=14% Similarity=0.234 Sum_probs=45.0
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
.+++.|+||.++| |+..+... +|.-++.++.-.+.+.+.
T Consensus 88 vS~LTynp~~rtL-Fav~n~p~----------------------------------~iVElt~~GdlirtiPL~------ 126 (316)
T COG3204 88 VSSLTYNPDTRTL-FAVTNKPA----------------------------------AIVELTKEGDLIRTIPLT------ 126 (316)
T ss_pred ccceeeCCCcceE-EEecCCCc----------------------------------eEEEEecCCceEEEeccc------
Confidence 5788899999988 54444222 344456666555666543
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ 145 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~ 145 (571)
+-.-...+.|..+|++ +....|.+ ...++.+|.++..
T Consensus 127 --g~~DpE~Ieyig~n~f-vi~dER~~-~l~~~~vd~~t~~ 163 (316)
T COG3204 127 --GFSDPETIEYIGGNQF-VIVDERDR-ALYLFTVDADTTV 163 (316)
T ss_pred --ccCChhHeEEecCCEE-EEEehhcc-eEEEEEEcCCccE
Confidence 2333445789999864 44455553 3345556666543
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=82.44 E-value=50 Score=32.10 Aligned_cols=167 Identities=13% Similarity=0.078 Sum_probs=89.4
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEec-
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK- 184 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~- 184 (571)
..++.++.+.+.|-|..|+-. .|++ .|..-+.++|-+....... ..|.-. +++ ..|+.++.|..
T Consensus 191 gh~h~vS~V~f~P~gd~ilS~-srD~---tik~We~~tg~cv~t~~~h-~ewvr~---v~v-------~~DGti~As~s~ 255 (406)
T KOG0295|consen 191 GHEHGVSSVFFLPLGDHILSC-SRDN---TIKAWECDTGYCVKTFPGH-SEWVRM---VRV-------NQDGTIIASCSN 255 (406)
T ss_pred CcccceeeEEEEecCCeeeec-cccc---ceeEEecccceeEEeccCc-hHhEEE---EEe-------cCCeeEEEecCC
Confidence 456788899999999766655 4444 3788888998875433321 126532 222 46776665543
Q ss_pred CCccEEEEEeCCCcee-eceeecCeEEEEEEEEee--------------cCcEEEEEEcCCCCceeEEEEEEeCCCCCCC
Q 008274 185 TGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNE--------------ASGQVYFTGTLDGPLESHLYCAKLYPDWNHT 249 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~--------------dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~ 249 (571)
+-.-++|.+. +++. ..|+..+..++-+ .|-| ++..+.++..++.- -.++-+++ |.
T Consensus 256 dqtl~vW~~~--t~~~k~~lR~hEh~vEci-~wap~~~~~~i~~at~~~~~~~~l~s~SrDkt--Ik~wdv~t---g~-- 325 (406)
T KOG0295|consen 256 DQTLRVWVVA--TKQCKAELREHEHPVECI-AWAPESSYPSISEATGSTNGGQVLGSGSRDKT--IKIWDVST---GM-- 325 (406)
T ss_pred CceEEEEEec--cchhhhhhhccccceEEE-EecccccCcchhhccCCCCCccEEEeecccce--EEEEeccC---Ce--
Confidence 3344555553 3332 2333333333221 2322 33456666666553 45554443 21
Q ss_pred CCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 250 LEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 250 ~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.-.+....+++.....|+|.|+|++ ++.... .+.+.++.+..-.+.+.
T Consensus 326 -cL~tL~ghdnwVr~~af~p~Gkyi~-ScaDDk---tlrvwdl~~~~cmk~~~ 373 (406)
T KOG0295|consen 326 -CLFTLVGHDNWVRGVAFSPGGKYIL-SCADDK---TLRVWDLKNLQCMKTLE 373 (406)
T ss_pred -EEEEEecccceeeeeEEcCCCeEEE-EEecCC---cEEEEEeccceeeeccC
Confidence 1112223445566679999998764 444433 46677776666554443
|
|
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=82.29 E-value=77 Score=34.11 Aligned_cols=159 Identities=8% Similarity=-0.040 Sum_probs=76.2
Q ss_pred CCceeEEEEEccCCeEEEEEEeccC-ccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQ-TKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~-~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
.++-+..++-+|||+..+..+.... .-++.-.++-..|..+...+-....-+.......- .+.+||+ ++.++-=
T Consensus 453 HdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~----v~~Spdgk~LaVsLL 528 (888)
T KOG0306|consen 453 HDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLC----VSVSPDGKLLAVSLL 528 (888)
T ss_pred cccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEE----EEEcCCCcEEEEEec
Confidence 4667777888999996666543332 12223333334454433211111100000000000 0224555 6666544
Q ss_pred CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEE
Q 008274 185 TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHV 264 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~ 264 (571)
+..-++|.+|.-. -.--|-.....|... -+|||++.|+-.+.+.+ ..+|=.+. +.= .---..+++..-+
T Consensus 529 dnTVkVyflDtlK-FflsLYGHkLPV~sm-DIS~DSklivTgSADKn---VKiWGLdF--GDC----HKS~fAHdDSvm~ 597 (888)
T KOG0306|consen 529 DNTVKVYFLDTLK-FFLSLYGHKLPVLSM-DISPDSKLIVTGSADKN---VKIWGLDF--GDC----HKSFFAHDDSVMS 597 (888)
T ss_pred cCeEEEEEeccee-eeeeecccccceeEE-eccCCcCeEEeccCCCc---eEEecccc--chh----hhhhhcccCceeE
Confidence 5556777776211 011222234445544 38999987766655544 67776666 210 0112222333345
Q ss_pred EEECCCCCEEEEEeeCC
Q 008274 265 AVLDHNMRNFVDFHDSL 281 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~~ 281 (571)
+.|-|+ .++.|+++..
T Consensus 598 V~F~P~-~~~FFt~gKD 613 (888)
T KOG0306|consen 598 VQFLPK-THLFFTCGKD 613 (888)
T ss_pred EEEccc-ceeEEEecCc
Confidence 678885 5777777653
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=82.25 E-value=42 Score=33.87 Aligned_cols=161 Identities=13% Similarity=0.137 Sum_probs=86.7
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc-eEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ-RKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~-~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~ 185 (571)
....++.+.|-.||++++.- ...+. |-++|..+.. .+.+..++.+.- ...|.+ ..+.++...+++
T Consensus 67 Fk~~v~s~~fR~DG~LlaaG--D~sG~--V~vfD~k~r~iLR~~~ah~apv~---~~~f~~-------~d~t~l~s~sDd 132 (487)
T KOG0310|consen 67 FKDVVYSVDFRSDGRLLAAG--DESGH--VKVFDMKSRVILRQLYAHQAPVH---VTKFSP-------QDNTMLVSGSDD 132 (487)
T ss_pred hccceeEEEeecCCeEEEcc--CCcCc--EEEeccccHHHHHHHhhccCcee---EEEecc-------cCCeEEEecCCC
Confidence 45567788999999966553 33333 5555655421 122222222100 012222 123344444444
Q ss_pred CccEEEEEeCCCceee-ceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEE
Q 008274 186 GFRHLYLHDINGTCLG-PITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHV 264 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~-~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~ 264 (571)
.-..+|- +++.... .|+...-.+... .|+|.++.+++++.-++. ..+|-... .+. ....+.++.-..+
T Consensus 133 ~v~k~~d--~s~a~v~~~l~~htDYVR~g-~~~~~~~hivvtGsYDg~--vrl~DtR~--~~~----~v~elnhg~pVe~ 201 (487)
T KOG0310|consen 133 KVVKYWD--LSTAYVQAELSGHTDYVRCG-DISPANDHIVVTGSYDGK--VRLWDTRS--LTS----RVVELNHGCPVES 201 (487)
T ss_pred ceEEEEE--cCCcEEEEEecCCcceeEee-ccccCCCeEEEecCCCce--EEEEEecc--CCc----eeEEecCCCceee
Confidence 4444444 3444431 233322223333 489999999999987774 66665443 222 5566777666677
Q ss_pred EEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 265 AVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
+-+-|+|..++ ++++ |.+-+.|+.+|.+
T Consensus 202 vl~lpsgs~ia-sAgG----n~vkVWDl~~G~q 229 (487)
T KOG0310|consen 202 VLALPSGSLIA-SAGG----NSVKVWDLTTGGQ 229 (487)
T ss_pred EEEcCCCCEEE-EcCC----CeEEEEEecCCce
Confidence 77777776553 3332 3788888876664
|
|
| >KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=81.01 E-value=1.7 Score=42.30 Aligned_cols=56 Identities=25% Similarity=0.349 Sum_probs=43.3
Q ss_pred eEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCC
Q 008274 27 GYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNY 106 (571)
Q Consensus 27 ~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~ 106 (571)
++.||||+.++++.+.++ .+++||+..|+....- .+
T Consensus 128 dL~Ws~d~~~l~s~s~dn------------------------------------s~~l~Dv~~G~l~~~~--------~d 163 (434)
T KOG1009|consen 128 DLAWSPDSNFLVSGSVDN------------------------------------SVRLWDVHAGQLLAIL--------DD 163 (434)
T ss_pred hhhccCCCceeeeeeccc------------------------------------eEEEEEeccceeEeec--------cc
Confidence 467999999999877652 4588999999865441 35
Q ss_pred CCceeEEEEEccCCeEEEEE
Q 008274 107 DEEYLARVNWMHGNILTAQV 126 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~ 126 (571)
..+|+..++|-|-+++++..
T Consensus 164 h~~yvqgvawDpl~qyv~s~ 183 (434)
T KOG1009|consen 164 HEHYVQGVAWDPLNQYVASK 183 (434)
T ss_pred cccccceeecchhhhhhhhh
Confidence 67899999999999876644
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=80.52 E-value=28 Score=37.36 Aligned_cols=93 Identities=17% Similarity=0.253 Sum_probs=54.4
Q ss_pred ccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCC
Q 008274 172 TKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE 251 (571)
Q Consensus 172 ~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~ 251 (571)
+|+.+.|++.|.-+-.-.||.... ...+.-+...+| |+.+ .|.|-.+..++++..++. ..||.+. +-
T Consensus 376 SWSKn~fLLSSSMDKTVRLWh~~~-~~CL~~F~Hndf-VTcV-aFnPvDDryFiSGSLD~K--vRiWsI~---d~----- 442 (712)
T KOG0283|consen 376 SWSKNNFLLSSSMDKTVRLWHPGR-KECLKVFSHNDF-VTCV-AFNPVDDRYFISGSLDGK--VRLWSIS---DK----- 442 (712)
T ss_pred ccccCCeeEeccccccEEeecCCC-cceeeEEecCCe-eEEE-EecccCCCcEeecccccc--eEEeecC---cC-----
Confidence 566666776665555556666542 223445555565 3444 489988888888888875 6777653 11
Q ss_pred CCeEecCCCc-eEEEEECCCCCEEEEE
Q 008274 252 APVKLTNGKG-KHVAVLDHNMRNFVDF 277 (571)
Q Consensus 252 ~~~~lt~~~g-~~~~~~s~~g~~~v~~ 277 (571)
++.--++-.. ...+.++|||++.+.-
T Consensus 443 ~Vv~W~Dl~~lITAvcy~PdGk~avIG 469 (712)
T KOG0283|consen 443 KVVDWNDLRDLITAVCYSPDGKGAVIG 469 (712)
T ss_pred eeEeehhhhhhheeEEeccCCceEEEE
Confidence 2222222222 2345788999877653
|
|
| >KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=80.25 E-value=9.2 Score=42.46 Aligned_cols=98 Identities=19% Similarity=0.255 Sum_probs=61.9
Q ss_pred CccEEEEEeCCCceeeceeecC----eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc
Q 008274 186 GFRHLYLHDINGTCLGPITEGD----WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG 261 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~~~----~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g 261 (571)
+-.+|++.|+... .++.|.+. -++. +++|...-.+|+.++...+. .-|| |+ ..++ .+..++...+
T Consensus 137 ~~geI~iWDlnn~-~tP~~~~~~~~~~eI~-~lsWNrkvqhILAS~s~sg~--~~iW--Dl--r~~~---pii~ls~~~~ 205 (1049)
T KOG0307|consen 137 DDGEILIWDLNKP-ETPFTPGSQAPPSEIK-CLSWNRKVSHILASGSPSGR--AVIW--DL--RKKK---PIIKLSDTPG 205 (1049)
T ss_pred CCCcEEEeccCCc-CCCCCCCCCCCcccce-EeccchhhhHHhhccCCCCC--ceec--cc--cCCC---cccccccCCC
Confidence 3457888887652 34444431 1233 34587777788888776653 3333 44 2221 3444554433
Q ss_pred ---eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCC
Q 008274 262 ---KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 294 (571)
Q Consensus 262 ---~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~ 294 (571)
.+...|.|+...-+.+.+...+.|.|.+.|++.
T Consensus 206 ~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~ 241 (1049)
T KOG0307|consen 206 RMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRF 241 (1049)
T ss_pred ccceeeeeeCCCCceeeeeecCCCCCceeEeecccc
Confidence 566789999988889999999999999888643
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.24 E-value=2.4 Score=41.73 Aligned_cols=37 Identities=22% Similarity=0.133 Sum_probs=28.2
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
..+.+.++.|+... ..-+|.+.|||+||.+|..++..
T Consensus 155 ~~~~~~~~~L~~~~--~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELY--PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhc--CCcEEEEecCChHHHHHHHHHHH
Confidence 44666677776653 25689999999999999988754
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=80.20 E-value=48 Score=30.40 Aligned_cols=141 Identities=16% Similarity=0.068 Sum_probs=66.9
Q ss_pred EEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCe-e
Q 008274 81 RLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW-V 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w-~ 158 (571)
.|+.+|+++|+..+- ..... +............+++.+++.... ..|+.+|+++|+..--........ .
T Consensus 87 ~l~~~d~~tG~~~W~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----g~l~~~d~~tG~~~w~~~~~~~~~~~ 157 (238)
T PF13360_consen 87 SLYALDAKTGKVLWSIYLTSS-----PPAGVRSSSSPAVDGDRLYVGTSS----GKLVALDPKTGKLLWKYPVGEPRGSS 157 (238)
T ss_dssp EEEEEETTTSCEEEEEEE-SS-----CTCSTB--SEEEEETTEEEEEETC----SEEEEEETTTTEEEEEEESSTT-SS-
T ss_pred eeEecccCCcceeeeeccccc-----cccccccccCceEecCEEEEEecc----CcEEEEecCCCcEEEEeecCCCCCCc
Confidence 789999999988765 33210 011111222233335555554432 249999999997643222211110 0
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
... .+......+....+ .++.+..+|. +..++..+++..- ....-.... ....+++.||+.+ .+ .+|+
T Consensus 158 ~~~-~~~~~~~~~~~~~~-~v~~~~~~g~--~~~~d~~tg~~~w-~~~~~~~~~--~~~~~~~~l~~~~-~~----~~l~ 225 (238)
T PF13360_consen 158 PIS-SFSDINGSPVISDG-RVYVSSGDGR--VVAVDLATGEKLW-SKPISGIYS--LPSVDGGTLYVTS-SD----GRLY 225 (238)
T ss_dssp -EE-EETTEEEEEECCTT-EEEEECCTSS--EEEEETTTTEEEE-EECSS-ECE--CEECCCTEEEEEE-TT----TEEE
T ss_pred cee-eecccccceEEECC-EEEEEcCCCe--EEEEECCCCCEEE-EecCCCccC--CceeeCCEEEEEe-CC----CEEE
Confidence 000 00000000011223 5555555553 5666888776332 211111111 1456788888887 32 5788
Q ss_pred EEEe
Q 008274 239 CAKL 242 (571)
Q Consensus 239 ~~~l 242 (571)
.+++
T Consensus 226 ~~d~ 229 (238)
T PF13360_consen 226 ALDL 229 (238)
T ss_dssp EEET
T ss_pred EEEC
Confidence 8887
|
... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=80.14 E-value=61 Score=34.56 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=23.9
Q ss_pred ecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 256 LTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 256 lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
++-+..-+.+.+||||++++..- ...+.+.++++.+.
T Consensus 317 IPVGKsPHGV~vSPDGkylyVan---klS~tVSVIDv~k~ 353 (635)
T PRK02888 317 VPVPKNPHGVNTSPDGKYFIANG---KLSPTVTVIDVRKL 353 (635)
T ss_pred EECCCCccceEECCCCCEEEEeC---CCCCcEEEEEChhh
Confidence 33344456779999999876532 23347888887543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 571 | ||||
| 2ecf_A | 741 | Crystal Structure Of Dipeptidyl Aminopeptidase Iv F | 6e-85 | ||
| 2d5l_A | 706 | Crystal Structure Of Prolyl Tripeptidyl Aminopeptid | 6e-55 | ||
| 2dcm_A | 706 | The Crystal Structure Of S603a Mutated Prolyl Tripe | 7e-55 | ||
| 2z3w_A | 706 | Prolyl Tripeptidyl Aminopeptidase Mutant E636a Leng | 2e-54 | ||
| 1z68_A | 719 | Crystal Structure Of Human Fibroblast Activation Pr | 3e-37 | ||
| 1pfq_A | 731 | Crystal Structure Of Human Apo Dipeptidyl Peptidase | 1e-34 | ||
| 1r9n_A | 739 | Crystal Structure Of Human Dipeptidyl Peptidase Iv | 2e-34 | ||
| 2rip_A | 729 | Structure Of Dppiv In Complex With An Inhibitor Len | 2e-34 | ||
| 2qt9_A | 766 | Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A | 2e-34 | ||
| 3ccb_A | 740 | Crystal Structure Of Human Dpp4 In Complex With A B | 2e-34 | ||
| 3nox_A | 753 | Crystal Structure Of Human Dpp-Iv In Complex With S | 2e-34 | ||
| 2qjr_A | 748 | Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf | 2e-34 | ||
| 1x70_A | 728 | Human Dipeptidyl Peptidase Iv In Complex With A Bet | 2e-34 | ||
| 1j2e_A | 740 | Crystal Structure Of Human Dipeptidyl Peptidase Iv | 2e-34 | ||
| 1n1m_A | 728 | Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A | 2e-34 | ||
| 2rgu_A | 734 | Crystal Structure Of Complex Of Human Dpp4 And Inhi | 2e-34 | ||
| 3q8w_A | 732 | A B-Aminoacyl Containing Thiazolidine Derivative An | 2e-34 | ||
| 2g5p_A | 726 | Crystal Structure Of Human Dipeptidyl Peptidase Iv | 2e-34 | ||
| 2onc_A | 731 | Crystal Structure Of Human Dpp-4 Length = 731 | 2e-34 | ||
| 1r9m_A | 733 | Crystal Structure Of Human Dipeptidyl Peptidase Iv | 2e-34 | ||
| 2jid_A | 736 | Human Dipeptidyl Peptidase Iv In Complex With 1-(3, | 2e-34 | ||
| 2bgr_A | 738 | Crystal Structure Of Hiv-1 Tat Derived Nonapeptides | 2e-34 | ||
| 4a5s_A | 740 | Crystal Structure Of Human Dpp4 In Complex With A N | 3e-34 | ||
| 1u8e_A | 728 | Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F Leng | 4e-34 | ||
| 3qbj_A | 748 | Crystal Structure Of Dipeptidyl Peptidase Iv In Com | 1e-33 | ||
| 1orv_A | 728 | Crystal Structure Of Porcine Dipeptidyl Peptidase I | 4e-33 | ||
| 1xfd_A | 723 | Structure Of A Human A-Type Potassium Channel Accel | 7e-33 | ||
| 2gbc_A | 730 | Native Dpp-Iv (Cd26) From Rat Length = 730 | 1e-29 | ||
| 2qzp_A | 562 | Crystal Structure Of Mutation Of An Acylptide Hydro | 6e-14 | ||
| 1ve6_A | 582 | Crystal Structure Of An Acylpeptide HydrolaseESTERA | 7e-14 | ||
| 2hu8_A | 582 | Binding Of Inhibitors By Acylaminoacyl Peptidase Le | 7e-14 | ||
| 2qr5_A | 582 | Aeropyrum Pernix Acylaminoacyl Peptidase, H367a Mut | 1e-13 | ||
| 3o4j_A | 582 | Structure And Catalysis Of Acylaminoacyl Peptidase | 2e-13 | ||
| 3o4h_A | 582 | Structure And Catalysis Of Acylaminoacyl Peptidase | 5e-13 | ||
| 3azo_A | 662 | Crystal Structure Of Puromycin Hydrolase Length = 6 | 9e-09 | ||
| 3azp_A | 662 | Crystal Structure Of Puromycin Hydrolase S511a Muta | 6e-08 |
| >pdb|2ECF|A Chain A, Crystal Structure Of Dipeptidyl Aminopeptidase Iv From Stenotrophomonas Maltophilia Length = 741 | Back alignment and structure |
|
| >pdb|2D5L|A Chain A, Crystal Structure Of Prolyl Tripeptidyl Aminopeptidase From Porphyromonas Gingivalis Length = 706 | Back alignment and structure |
|
| >pdb|2DCM|A Chain A, The Crystal Structure Of S603a Mutated Prolyl Tripeptidyl Aminopeptidase Complexed With Substrate Length = 706 | Back alignment and structure |
|
| >pdb|2Z3W|A Chain A, Prolyl Tripeptidyl Aminopeptidase Mutant E636a Length = 706 | Back alignment and structure |
|
| >pdb|1Z68|A Chain A, Crystal Structure Of Human Fibroblast Activation Protein Alpha Length = 719 | Back alignment and structure |
|
| >pdb|1PFQ|A Chain A, Crystal Structure Of Human Apo Dipeptidyl Peptidase Iv / Cd26 Length = 731 | Back alignment and structure |
|
| >pdb|1R9N|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv In Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution Length = 739 | Back alignment and structure |
|
| >pdb|2RIP|A Chain A, Structure Of Dppiv In Complex With An Inhibitor Length = 729 | Back alignment and structure |
|
| >pdb|2QT9|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl Cyclohexylalanine Inhibitor Length = 766 | Back alignment and structure |
|
| >pdb|3CCB|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A Benzimidazole Derivative Length = 740 | Back alignment and structure |
|
| >pdb|3NOX|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With Sa-(+)-(6- (Aminomethyl)-5-(2,4-Dichlorophenyl)-7-Methylimidazo[1, 2-A]pyrimidin- 2-Yl)(Morpholino)methanone Length = 753 | Back alignment and structure |
|
| >pdb|2QJR|A Chain A, Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf Length = 748 | Back alignment and structure |
|
| >pdb|1X70|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With A Beta Amino Acid Inhibitor Length = 728 | Back alignment and structure |
|
| >pdb|1J2E|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv Length = 740 | Back alignment and structure |
|
| >pdb|1N1M|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN INHIBITOR Length = 728 | Back alignment and structure |
|
| >pdb|2RGU|A Chain A, Crystal Structure Of Complex Of Human Dpp4 And Inhibitor Length = 734 | Back alignment and structure |
|
| >pdb|3Q8W|A Chain A, A B-Aminoacyl Containing Thiazolidine Derivative And Dppiv Complex Length = 732 | Back alignment and structure |
|
| >pdb|2G5P|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv) Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor 21ac Length = 726 | Back alignment and structure |
|
| >pdb|2ONC|A Chain A, Crystal Structure Of Human Dpp-4 Length = 731 | Back alignment and structure |
|
| >pdb|1R9M|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1 Ang. Resolution. Length = 733 | Back alignment and structure |
|
| >pdb|2JID|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With 1-(3,4- Dimethoxy-Phenyl)-3-M-Tolyl-Piperidine-4-Ylamine Length = 736 | Back alignment and structure |
|
| >pdb|2BGR|A Chain A, Crystal Structure Of Hiv-1 Tat Derived Nonapeptides Tat(1-9) Bound To The Active Site Of Dipeptidyl Peptidase Iv (Cd26) Length = 738 | Back alignment and structure |
|
| >pdb|4A5S|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A Noval Heterocyclic Dpp4 Inhibitor Length = 740 | Back alignment and structure |
|
| >pdb|1U8E|A Chain A, Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F Length = 728 | Back alignment and structure |
|
| >pdb|3QBJ|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex With Inhibitor Length = 748 | Back alignment and structure |
|
| >pdb|1ORV|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv (Cd26) Length = 728 | Back alignment and structure |
|
| >pdb|1XFD|A Chain A, Structure Of A Human A-Type Potassium Channel Accelerating Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase Family Length = 723 | Back alignment and structure |
|
| >pdb|2GBC|A Chain A, Native Dpp-Iv (Cd26) From Rat Length = 730 | Back alignment and structure |
|
| >pdb|2QZP|A Chain A, Crystal Structure Of Mutation Of An Acylptide HydrolaseESTERASE FROM AEROPYRUM PERNIX K1 Length = 562 | Back alignment and structure |
|
| >pdb|1VE6|A Chain A, Crystal Structure Of An Acylpeptide HydrolaseESTERASE FROM Aeropyrum Pernix K1 Length = 582 | Back alignment and structure |
|
| >pdb|2HU8|A Chain A, Binding Of Inhibitors By Acylaminoacyl Peptidase Length = 582 | Back alignment and structure |
|
| >pdb|2QR5|A Chain A, Aeropyrum Pernix Acylaminoacyl Peptidase, H367a Mutant Length = 582 | Back alignment and structure |
|
| >pdb|3O4J|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase Length = 582 | Back alignment and structure |
|
| >pdb|3O4H|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase Length = 582 | Back alignment and structure |
|
| >pdb|3AZO|A Chain A, Crystal Structure Of Puromycin Hydrolase Length = 662 | Back alignment and structure |
|
| >pdb|3AZP|A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant Length = 662 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 571 | |||
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 0.0 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 0.0 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 0.0 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 0.0 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 1e-180 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 8e-58 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 1e-55 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 8e-42 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 3e-26 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 5e-25 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 2e-24 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 2e-24 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 2e-23 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 4e-21 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 1e-18 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 4e-18 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 2e-16 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 1e-15 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 4e-14 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 3e-13 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 5e-13 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 4e-11 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 8e-11 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 2e-10 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 8e-10 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 8e-10 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 8e-09 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 8e-09 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 1e-08 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 2e-08 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 5e-08 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 2e-07 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 2e-07 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 5e-07 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 9e-07 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 2e-06 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 2e-06 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 2e-06 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 1e-05 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 1e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-05 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 8e-05 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 5e-04 |
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* Length = 706 | Back alignment and structure |
|---|
Score = 590 bits (1522), Expect = 0.0
Identities = 162/568 (28%), Positives = 258/568 (45%), Gaps = 35/568 (6%)
Query: 10 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
T + + Q E + G +WS +AF ++D S + I+ +
Sbjct: 168 TLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVD---YHPLEAESKPLY 224
Query: 70 YPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM-HGNILTAQVLN 128
YP AG + V +G+ A G ++ E++L ++W NIL +N
Sbjct: 225 YPMAGTPSHHVTVGIYHLATGKTVYLQTG------EPKEKFLTNLSWSPDENILYVAEVN 278
Query: 129 RSQTKLKVLKFDIKTGQRKVILVEELDS-WVNLHDCFTPLDKGVTKYSGGFIWASEKTGF 187
R+Q + KV +D +TG+ L E D +V T L + FIW S + G+
Sbjct: 279 RAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGS----NNQFIWQSRRDGW 334
Query: 188 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247
HLYL+D G + +T+G+W V G + ++YF T PLE H YC +
Sbjct: 335 NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG-- 392
Query: 248 HTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLT 307
LT G H L + +D S P ++ + ++ GS L + P
Sbjct: 393 ----KTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKNPD- 447
Query: 308 VPRIKRLQLEPPDIVQIQANDG-TVLYGALYKP---DESRYGPPPYKTLISVYGGPCVQL 363
+ I A DG T LY L P D ++ Y ++ VYGGP QL
Sbjct: 448 ----TGYAMPEIRTGTIMAADGQTPLYYKLTMPLHFDPAK----KYPVIVYVYGGPHAQL 499
Query: 364 VCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEW 423
V +W ++V Y+ KG V+ +D+RG+A RG FE I G+ + DQ+ G ++
Sbjct: 500 VTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDF 559
Query: 424 LIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMG 483
L Q IG++GWSYGG+++ + DVF+ V+G PV W+ Y Y E+Y
Sbjct: 560 LKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAIMYGERYFD 619
Query: 484 LPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIF 543
P E+P GY+ ++++ +KG+L+L+HG ID V ++H+ ++A V AR + ++
Sbjct: 620 APQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVY 679
Query: 544 PDERHMPRRHRDRIYMEERIWEFIERTL 571
P H DR+++ E I + L
Sbjct: 680 PSHEHNVMGP-DRVHLYETITRYFTDHL 706
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Length = 741 | Back alignment and structure |
|---|
Score = 590 bits (1524), Expect = 0.0
Identities = 196/572 (34%), Positives = 297/572 (51%), Gaps = 38/572 (6%)
Query: 10 THGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHA 69
+G+AE++A EEMDR TGYWW+ D IA+ ++D S +P + +
Sbjct: 196 GNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADR---TDVIEQR 252
Query: 70 YPFAGASNVKVRLGVVS-AAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLN 128
YP AG +NV+V+LGV+S A W+DL + YLARVNW L+ Q +
Sbjct: 253 YPAAGDANVQVKLGVISPAEQAQTQWIDLG------KEQDIYLARVNWRDPQHLSFQRQS 306
Query: 129 RSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188
R Q KL +++ + + Q++V+ E +WV LH+ LD G +W+SE+TGF+
Sbjct: 307 RDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD------DGSILWSSERTGFQ 360
Query: 189 HLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNH 248
HLY D G +T G+W V++++ V+E +G YF ++ ES +Y L
Sbjct: 361 HLYRIDSKGKAA-ALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG--- 416
Query: 249 TLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTV 308
P +L+ G H A N +VD + +PP+I L +G + L E L
Sbjct: 417 ---QPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRA-NGEKIATLVENDLAD 472
Query: 309 PRIKRLQLE----PPDIVQIQANDG-TVLYGALYKP---DESRYGPPPYKTLISVYGGPC 360
P+ + P + + A DG T L ++ KP D ++ Y + VYGGP
Sbjct: 473 PKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGFDPAK----RYPVAVYVYGGPA 528
Query: 361 VQLVCDSWINTVD-MRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLT 419
Q V DSW D + QYL +G +V+ LDNRGT RRG F ++ G ++ DQL
Sbjct: 529 SQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLR 588
Query: 420 GAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTE 479
G WL +Q IG+ GWS GGY++ + LA+ D + C V+GAPVT W YD+ YTE
Sbjct: 589 GVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDSHYTE 648
Query: 480 KYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539
+YM LP+ + GY + V+ H+ ++ LLL+HGM D+NV F ++ L++AL +P+E
Sbjct: 649 RYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFE 708
Query: 540 ILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
++ +P +H D ++ F+ R L
Sbjct: 709 LMTYPGAKHGLSGA-DALHRYRVAEAFLGRCL 739
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 Length = 723 | Back alignment and structure |
|---|
Score = 537 bits (1386), Expect = 0.0
Identities = 137/575 (23%), Positives = 237/575 (41%), Gaps = 25/575 (4%)
Query: 10 THGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDH 68
+GL++++ +EE+ +WWS D +A+ ++ S +P + S + + +
Sbjct: 159 YNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTV--KPY 216
Query: 69 AYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLN 128
YP AG+ N + L V+ G + D E Y+ V W + LN
Sbjct: 217 HYPKAGSENPSISLHVIGLNGPTHDLEMMPPD--DPRMREYYITMVKWATSTKVAVTWLN 274
Query: 129 RSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188
R+Q + D TG +E ++W++ + K K+ FI A + G
Sbjct: 275 RAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKF--FFIRAIPQGGRG 332
Query: 189 HLYLH-------DINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 241
Y + + + IT GDW V +I+ +E ++YF T D P LY A
Sbjct: 333 KFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392
Query: 242 LYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301
++N + L A H+M F+ + P + + D + L
Sbjct: 393 TVGNFNRQCLSC-DLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVH-NTTDKKKMFDL 450
Query: 302 YEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCV 361
I Q+ + I+ +D L + KP + Y L+ V G P
Sbjct: 451 ETNEHVKKAINDRQMPKVEYRDIEIDDYN-LPMQILKPA-TFTDTTHYPLLLVVDGTPGS 508
Query: 362 QLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGA 421
Q V + + V + S G +V K D RG+ +G K ++ G ++ +DQ+
Sbjct: 509 QSVAEKF--EVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAV 566
Query: 422 EWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPVTSWDGYDTFY 477
++K+ + ++G YGGYLS L + F C + +P+T + Y + +
Sbjct: 567 RTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAF 626
Query: 478 TEKYMGLPSEDPVGYEYSSVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAARK 536
+E+Y+GL D YE + V H V + + + L++H DE +HF+HTA LI L+ +
Sbjct: 627 SERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKA 686
Query: 537 PYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
Y + I+PDE H + ++ I F
Sbjct: 687 NYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 721
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... Length = 740 | Back alignment and structure |
|---|
Score = 532 bits (1373), Expect = 0.0
Identities = 132/579 (22%), Positives = 231/579 (39%), Gaps = 27/579 (4%)
Query: 10 THGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDH 68
+G+ +++ +EE+ + WWS + F+A+ Q + +E+P S+
Sbjct: 157 YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRV 216
Query: 69 AYPFAGASNVKVRLGVVSAAGGPVSWMDLQ---CGGTDQNYDEEYLARVNWMHGNILTAQ 125
YP AGA N V+ VV+ + YL V W ++ Q
Sbjct: 217 PYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQ 276
Query: 126 VLNRSQT--KLKVLKFDIKTGQRKVILVEEL-----DSWVNLHDCFTPLDKGVTKYSGGF 178
L R Q + + +D +G+ ++ + WV P + +
Sbjct: 277 WLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPH--FTLDGNSFY 334
Query: 179 IWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238
S + G+RH+ I+ IT+G W V I + P +LY
Sbjct: 335 KIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLY 394
Query: 239 CAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLV 298
+L T + + + + P L S + +
Sbjct: 395 KIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLH-SSVNDKGL 453
Query: 299 LPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP---DESRYGPPPYKTLISV 355
L + ++ +Q+ P + + T + + P D+S+ Y L+ V
Sbjct: 454 RVLEDNSALDKMLQNVQM-PSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLLDV 508
Query: 356 YGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAE 415
Y GPC Q + ++ ++ I+V D RG+ +G K +I G + E
Sbjct: 509 YAGPCSQKADTVF--RLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVE 566
Query: 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT 475
DQ+ A K G I ++GWSYGGY++++ L VF+C ++ APV+ W+ YD+
Sbjct: 567 DQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDS 626
Query: 476 FYTEKYMGL--PSEDPVGYEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTARLINALV 532
YTE+YMGL P ++ Y S+VM K + LL+HG D+NVHF+ +A++ ALV
Sbjct: 627 VYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALV 686
Query: 533 AARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
++ + + DE H ++ + FI++
Sbjct: 687 DVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCF 725
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} Length = 719 | Back alignment and structure |
|---|
Score = 525 bits (1353), Expect = e-180
Identities = 135/577 (23%), Positives = 241/577 (41%), Gaps = 28/577 (4%)
Query: 10 THGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDH 68
+G+ +++ +EEM K WWS + KF+A+ + + ++IP + G +
Sbjct: 155 FNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRT--INI 212
Query: 69 AYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLN 128
YP AGA N VR+ ++ + Y + + W+ + Q L
Sbjct: 213 PYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK 272
Query: 129 RSQTKLKVLKFDIKTGQRK-------VILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWA 181
R Q + D + + + E W TP+ +
Sbjct: 273 RVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSY--DAISYYKIF 330
Query: 182 SEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 241
S+K G++H++ IT G W I V + S + P ++Y
Sbjct: 331 SDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRIS 390
Query: 242 LY-PDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300
+ + + A + + P L + +
Sbjct: 391 IGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLH-DGRTDQEIKI 449
Query: 301 LYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKP---DESRYGPPPYKTLISVYG 357
L E +K +QL +I +++ D L+ + P D S+ Y LI VYG
Sbjct: 450 LEENKELENALKNIQLPKEEIKKLEV-DEITLWYKMILPPQFDRSK----KYPLLIQVYG 504
Query: 358 GPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQ 417
GPC Q V + V+ + +G+++ +D RGTA +G K ++ G + EDQ
Sbjct: 505 GPCSQSVRSVF--AVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQ 562
Query: 418 LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477
+T I+ G I ++GWSYGGY+S++ LA +F+C ++ APV+SW+ Y + Y
Sbjct: 563 ITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVY 622
Query: 478 TEKYMGLPSED--PVGYEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTARLINALVAA 534
TE++MGLP++D Y+ S+VM + LL+HG D+NVHF+++A++ ALV A
Sbjct: 623 TERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNA 682
Query: 535 RKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
+ ++ + + D+ H ++ + F+++
Sbjct: 683 QVDFQAMWYSDQNHGLSGL-STNHLYTHMTHFLKQCF 718
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A Length = 582 | Back alignment and structure |
|---|
Score = 202 bits (515), Expect = 8e-58
Identities = 103/560 (18%), Positives = 189/560 (33%), Gaps = 61/560 (10%)
Query: 26 TGYWWSLDSKFIAFTQV-DSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGV 84
+ I V +E ++ + + + +
Sbjct: 67 VLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVF 126
Query: 85 VSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTG 144
A V+ L GG + V+ + G+++ + ++ + ++ +G
Sbjct: 127 TGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAG-LGFFGGGRVSLFTSNLSSG 185
Query: 145 QRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPIT 204
+V S+ + +P E L D + +
Sbjct: 186 GLRV-FDSGEGSFSSAS--ISP--------GMKVTAGLETAREARLVTVDPRDGSVEDLE 234
Query: 205 EGDWMVEQIVGVNEAS------GQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258
G++ +G + ++ D +EAP
Sbjct: 235 LPSKDFSSYRPTAITWLGYLPDGRLAVVARREGR-------SAVFIDG-ERVEAP----- 281
Query: 259 GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEP 318
+G H V+ + V H SL +PPRI+ L G +L +P R +
Sbjct: 282 -QGNHGRVVLWRGK-LVTSHTSLSTPPRIVS--LPSGEPLLEG-----GLPEDLRRSIAG 332
Query: 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQY 378
+V +++ DG+ + + + P P T++ V+GGP + DS + D A
Sbjct: 333 SRLVWVESFDGSRVPTYVLESGR---APTPGPTVVLVHGGPFAE---DSD--SWDTFAAS 384
Query: 379 LRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLY 438
L + G V + RG+ G ++ I + + ED A W + GLA + +
Sbjct: 385 LAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLAS--ELYIM 442
Query: 439 GWSYGGYLSAITLARFPDVFQCAVSGAPVTSW-------DGYDTFYTEKYMGLPSEDPVG 491
G+SYGGY++ L P +F+ V+GA V W D + E+ G
Sbjct: 443 GYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTG---GSREI 499
Query: 492 YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR 551
S ++HV ++K L L+H + RL+ L+A K +E I PD H
Sbjct: 500 MRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAIN 559
Query: 552 RHRDRIYMEERIWEFIERTL 571
D + + F+
Sbjct: 560 TMEDAVKILLPAVFFLATQR 579
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A Length = 662 | Back alignment and structure |
|---|
Score = 198 bits (504), Expect = 1e-55
Identities = 90/534 (16%), Positives = 160/534 (29%), Gaps = 60/534 (11%)
Query: 65 QEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNY----------DEEYLARV 114
E+ G S+V+ L V G + +D + D +
Sbjct: 148 AEEFTGE--GPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWL 205
Query: 115 NWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKY 174
W H + T+LK + + + P
Sbjct: 206 AWDHPR------MPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP-------- 251
Query: 175 SGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLE 234
G I A+++TG+ +L+ D + + A PL
Sbjct: 252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEF--------AGPLWTPGMRWFAPLA 303
Query: 235 SHLYCAKLYPDWNHTL------EAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRIL 288
+ L V + A L + V S + ++
Sbjct: 304 NGLIAVVHGKGAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVV 363
Query: 289 LCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPP- 347
G + P I A DG ++ +Y P + P
Sbjct: 364 ELDTVTGRARTIGARHT---DPVDPAYYPEPQIRTFTAPDGREIHAHIYPPHSPDFTGPA 420
Query: 348 --PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI 405
++ +GGP + +D+ Y S+GI V ++ G+ G + +
Sbjct: 421 DELPPYVVMAHGGPTSR---VPA--VLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRERL 475
Query: 406 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGA 465
+ G +D ED A L ++G A + + G S GG+ +A +L DV+ C
Sbjct: 476 RGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLV-STDVYACGTVLY 534
Query: 466 PVTSWDG--------YDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDE 517
PV G +++ Y + +G E P Y + + +++ LL+ G+ D
Sbjct: 535 PVLDLLGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDP 594
Query: 518 NVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
R + A+ P+ L F E H RR + E +
Sbjct: 595 VCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVF 648
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 8e-42
Identities = 41/253 (16%), Positives = 76/253 (30%), Gaps = 23/253 (9%)
Query: 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS 381
++I L G L P ++ V+G Q + +RA+
Sbjct: 9 IEIPV-GQDELSGTLLTPT-------GMPGVLFVHGWGGSQ-------HHSLVRAREAVG 53
Query: 382 KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWS 441
G + D RG ++ + + +D + L I + G S
Sbjct: 54 LGCICMTFDLRGHEGYASMRQSVTRAQ----NLDDIKAAYDQLASLPYVDAHSIAVVGLS 109
Query: 442 YGGYLSAITLARFPDVFQCAVSGAPVTS--WDG-YDTFYTEKYMGLPSEDPVGYEYSSVM 498
YGGYLSA+ P + S A WD + + + + + +
Sbjct: 110 YGGYLSALLTRERPVEWLALRSPALYKDAHWDQPKVSLNADPDLMDYRRRALAPGDNLAL 169
Query: 499 HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIY 558
+ KG +LLV D V +A A + + H +
Sbjct: 170 AACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNA-RSLTSRVIAGADHALSVKEHQQE 228
Query: 559 MEERIWEFIERTL 571
+ +++ +
Sbjct: 229 YTRALIDWLTEMV 241
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-26
Identities = 46/266 (17%), Positives = 81/266 (30%), Gaps = 39/266 (14%)
Query: 324 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG 383
DG L L P + P I ++G S + + L G
Sbjct: 5 YIDCDGIKLNAYLDMPKNN---PEKCPLCIIIHGFTG-----HSEERHIVAVQETLNEIG 56
Query: 384 ILVWKLDNRGTARRGLKFE-ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSY 442
+ + D G + KFE ++ + L ++ K V I + G S
Sbjct: 57 VATLRADMYGHGKSDGKFEDHTLFKW-----LTNILAVVDYAKKLD--FVTDIYMAGHSQ 109
Query: 443 GGYLSAITLARFPDVFQCAVSGAPVTS-----------WDGYDTFYTEKYMGLPSEDPVG 491
GG + A D+ + + +P +D + +
Sbjct: 110 GGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDGRKLK 169
Query: 492 YEY------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD 545
Y V V K +L+VHG DE V + + K +++ P
Sbjct: 170 GNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQY----KNCKLVTIPG 225
Query: 546 ERHMPRRHRDRIYMEERIWEFIERTL 571
+ H H + + E + EF+ +
Sbjct: 226 DTHCYDHHLELVT--EAVKEFMLEQI 249
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 5e-25
Identities = 46/285 (16%), Positives = 79/285 (27%), Gaps = 59/285 (20%)
Query: 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS 381
+ G ++ KP + LI +G W + +
Sbjct: 85 LYFTGVRGARIHAKYIKPK----TEGKHPALIRFHGYSSNS---GDWND-----KLNYVA 132
Query: 382 KGILVWKLDNRGTARRGLKFEASIKHNCG----------------RIDAEDQLTGAEWLI 425
G V +D RG + + R D A ++
Sbjct: 133 AGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVM 192
Query: 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLP 485
+G+ G S GG LS A P V VS P S Y +
Sbjct: 193 NMPEVDEDRVGVMGPSQGGGLSLACAALEPRVR-KVVSEYPFLSD--YKRVWDLDLAKNA 249
Query: 486 SEDPVGY------------------EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARL 527
++ Y Y V + ++KG +L+ G++D+ + +
Sbjct: 250 YQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVC---PPSTV 306
Query: 528 INALVAARKPYEILIFPDERH-MPRRHRDRIYMEERIWEFIERTL 571
A + +I ++PD H R D +F+
Sbjct: 307 FAAYNNIQSKKDIKVYPDYGHEPMRGFGDLAM------QFMLELY 345
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 105 bits (262), Expect = 2e-24
Identities = 43/268 (16%), Positives = 75/268 (27%), Gaps = 44/268 (16%)
Query: 303 EQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQ 362
+ L + +R PP + + G V L+ P P I ++G
Sbjct: 118 GRLLCQAQHERH-FLPPGVWRQSVRAGRV-RATLFLPPGPGPFPGI----IDIFGIG--- 168
Query: 363 LVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAE 422
++ RA L G L + I E
Sbjct: 169 ------GGLLEYRASLLAGHGFATLALAYYNFEDLPNNMD--------NISLEYFEEAVC 214
Query: 423 WLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYM 482
++++ K IGL G S G + + +V S + +
Sbjct: 215 YMLQHPQVKGPGIGLLGISLGADICLSMASFLKNVSATVSINGSGISGNTAINYKHSSIP 274
Query: 483 GLPS-------------------EDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRH 523
L VG + M + K +G +LL+ G D N
Sbjct: 275 PLGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSEL 334
Query: 524 TARLINALVAARK--PYEILIFPDERHM 549
A+ ++ + A +I+ +P H
Sbjct: 335 YAQTVSERLQAHGKEKPQIICYPGTGHY 362
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* Length = 318 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 2e-24
Identities = 43/279 (15%), Positives = 77/279 (27%), Gaps = 50/279 (17%)
Query: 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS 381
+ ++ + G PD P+ ++ +G D I+
Sbjct: 59 LTYKSFGNARITGWYAVPD----KEGPHPAIVKYHGYNASY---DGEIH----EMVNWAL 107
Query: 382 KGILVWKLDNRGTARRGLKFEASIKHNCG--------------RIDAEDQLTGAEWLIKQ 427
G + + RG R + H G R D + E +
Sbjct: 108 HGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSF 167
Query: 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW--------DGYDTFYTE 479
IG+ G S GG L+ A AV+ P S
Sbjct: 168 DEVDETRIGVTGGSQGGGLTIAAAALSDIPK-AAVADYPYLSNFERAIDVALEQPYLEIN 226
Query: 480 KY---MGLPSEDPVGYE---YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA 533
+ G P + + Y +M+ ++K +L+ G+ID+ N L
Sbjct: 227 SFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHL-- 284
Query: 534 ARKPYEILIFPDERH-MPRRHRDRIYMEERIWEFIERTL 571
E+ ++ H + F ++ L
Sbjct: 285 -ETKKELKVYRYFGHEYIPAFQTEKL------AFFKQIL 316
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 102 bits (254), Expect = 2e-23
Identities = 45/268 (16%), Positives = 75/268 (27%), Gaps = 44/268 (16%)
Query: 303 EQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQ 362
+ L R +R L P V+ + + G L+ P E P + ++G
Sbjct: 134 GRLLCQTRHERYFLPPG--VRREPVRVGRVRGTLFLPPEPGPFPGI----VDMFGTG--- 184
Query: 363 LVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAE 422
++ RA L KG V L E + E
Sbjct: 185 ------GGLLEYRASLLAGKGFAVMALAYYNYEDLPKTME--------TLHLEYFEEAMN 230
Query: 423 WLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYM 482
+L+ K +GL G S GG L + + V V + G + E
Sbjct: 231 YLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLRYKGETLP 290
Query: 483 GLPS-------------------EDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHF-R 522
+ P+ V + + L + G D N
Sbjct: 291 PVGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEF 350
Query: 523 HTARLINALVAARKP-YEILIFPDERHM 549
+ L A + +I+ +P+ H
Sbjct: 351 YANEACKRLQAHGRRKPQIICYPETGHY 378
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A Length = 380 | Back alignment and structure |
|---|
Score = 94.4 bits (234), Expect = 4e-21
Identities = 35/281 (12%), Positives = 71/281 (25%), Gaps = 49/281 (17%)
Query: 304 QPLTVPRIKRLQLEPPDIVQIQ---ANDGTVLYGALYKP---DESRYGPPPYKTLISVYG 357
+P T + L D + G + L+ P + R Y ++ ++G
Sbjct: 127 EPFTSKQTDEKHLIIDDFLAFTFKDPETGVEIPYRLFVPKDVNPDR----KYPLVVFLHG 182
Query: 358 GP------CVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGR 411
+Q+ + V + +Y V + F
Sbjct: 183 AGERGTDNYLQVAGNRG-AVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTDRENPFNPE 241
Query: 412 IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 471
+ L+ + I + G S GGY + + FP++F A+
Sbjct: 242 KPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDVS 301
Query: 472 GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINAL 531
E+ +P + + H D V ++ L+ L
Sbjct: 302 -----KVERIKDIP----------------------IWVFHAEDDPVVPVENSRVLVKKL 334
Query: 532 VAARKPYEILIFPDERHMPRRHR-----DRIYMEERIWEFI 567
+ Y + E++
Sbjct: 335 AEIGGKVRYTEYEKGFMEKHGWDPHGSWIPTYENQEAIEWL 375
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* Length = 337 | Back alignment and structure |
|---|
Score = 86.5 bits (214), Expect = 1e-18
Identities = 39/298 (13%), Positives = 72/298 (24%), Gaps = 52/298 (17%)
Query: 309 PRIKRLQLEPPDI----VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLV 364
P +R++ + V G + G L P ++ G
Sbjct: 54 PVFERMESHLKTVEAYDVTFSGYRGQRIKGWLLVPKL---EEEKLPCVVQYIGYN----- 105
Query: 365 CDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNC------------GRI 412
+ S G + + +D RG LK + G +
Sbjct: 106 ---GGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGIL 162
Query: 413 DAEDQ---------LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS 463
D + E I + G S GG ++ A +
Sbjct: 163 DPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAK-ALLC 221
Query: 464 GAPVTSW---------DGYDTFYTEKYMGLPSEDPVGYE---YSSVMHHVHKMKGKLLLV 511
P T ++ + + Y ++ + K L
Sbjct: 222 DVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFS 281
Query: 512 HGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569
G++D N P EI I+P H + + + + E+
Sbjct: 282 VGLMDNICPPSTVFAAYNYY---AGPKEIRIYPYNNHEGGGSFQAVEQVKFLKKLFEK 336
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 85.4 bits (211), Expect = 4e-18
Identities = 40/253 (15%), Positives = 76/253 (30%), Gaps = 32/253 (12%)
Query: 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVW 387
DG + + P+ GP P+ +I + G +S + +G+
Sbjct: 135 DGIPMPVYVRIPE----GPGPHPAVIMLGGL-------ESTKEESFQMENLVLDRGMATA 183
Query: 388 KLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLS 447
D G + + D LT E + IG+ G S GG +
Sbjct: 184 TFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRN------DAIGVLGRSLGGNYA 237
Query: 448 AITLARFPDVFQCAVSGAPVTSWDGYDTF---------YTEKYMGLPSEDPVGYEYSSVM 498
+ A P +S + D +D Y K L +
Sbjct: 238 LKSAACEPR-LAACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETR 296
Query: 499 HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIY 558
+ ++ ++HG+ DE V ++ + A +++ D H R
Sbjct: 297 DVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHL--NLVVEKDGDHCCHNLGIRPR 353
Query: 559 MEERIWEFIERTL 571
+ +++ L
Sbjct: 354 --LEMADWLYDVL 364
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 77.9 bits (191), Expect = 2e-16
Identities = 33/230 (14%), Positives = 58/230 (25%), Gaps = 19/230 (8%)
Query: 346 PPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI 405
P L++++G + + +G L+ D R +S
Sbjct: 21 EAPKALLLALHGLQGSKEHILAL-------LPGYAERGFLLLAFDAPRHGEREGPPPSSK 73
Query: 406 KHNCGRIDAEDQLTGAEWLIK----QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 461
L E + + L G S G +++ + LA
Sbjct: 74 SPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVL 133
Query: 462 VSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHF 521
G+ + + Y+ LL +HG D V
Sbjct: 134 AF-----IGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPL 188
Query: 522 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
+ + AL + F +E H M F+E L
Sbjct: 189 ARMEKTLEALRPHYPEGRLARFVEEGA---GHTLTPLMARVGLAFLEHWL 235
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 76.0 bits (187), Expect = 1e-15
Identities = 39/263 (14%), Positives = 79/263 (30%), Gaps = 41/263 (15%)
Query: 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILV 386
DG L G +P Y I +G + + + A LR + I
Sbjct: 29 RDGLQLVGTREEPFG-----EIYDMAIIFHG-----FTANRNTSLLREIANSLRDENIAS 78
Query: 387 WKLDNRGTARRGLKF-EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGY 445
+ D G KF ++ + ED ++ V +I L G + GG
Sbjct: 79 VRFDFNGHGDSDGKFENMTVLNE-----IEDANAILNYVKTDP--HVRNIYLVGHAQGGV 131
Query: 446 LSAITLARFPDVFQCAVSGAPVTS-------WDGYDTFYTEKYMGLPSED---PVGYEY- 494
++++ +PD+ + V AP + + Y ++ +G Y
Sbjct: 132 VASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYL 191
Query: 495 -----SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH- 548
+ + + L+HG D V + + + + + H
Sbjct: 192 RIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKK----YDQIYQNSTLHLIEGADHC 247
Query: 549 MPRRHRDRIYMEERIWEFIERTL 571
++ +F++
Sbjct: 248 FSDSYQKNAV--NLTTDFLQNNN 268
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} Length = 391 | Back alignment and structure |
|---|
Score = 73.4 bits (179), Expect = 4e-14
Identities = 34/299 (11%), Positives = 74/299 (24%), Gaps = 51/299 (17%)
Query: 297 LVLPLYEQPLTVPRIKRLQLEPPDI--VQIQANDGTVLYGALYKPDESRYGPPPYKTLIS 354
+ P ++ + +K + E + + +V + KP+ + G P I
Sbjct: 63 MKFPEIKRQPSPVCVKTEKKEGYILEKWEFYPFPKSVSTFLVLKPEHLK-GAVPGVLCIP 121
Query: 355 VYGGP---------CVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK----- 400
G + + + N A + +G + +DN
Sbjct: 122 GSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDLECYDK 181
Query: 401 -------FEASIKHNCGR----IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAI 449
+ G + + W+ Q + I + G+S G +
Sbjct: 182 GWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEP-MM 240
Query: 450 TLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGK-- 507
L V + M P ++ +S+ H +
Sbjct: 241 VLGVLDKDIYAFVYNDFLCQTQ-----ERAVVMTKPDKENRRPFPNSIRHLIPGYWRYFN 295
Query: 508 ------------LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHR 554
++ G +D + + A + E +P R
Sbjct: 296 FPDVVASLAPRPIIFTEGGLDRDFRL---VQSAYAASGKPENAEFHHYPKFADKAVRKD 351
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 70.0 bits (171), Expect = 3e-13
Identities = 39/278 (14%), Positives = 76/278 (27%), Gaps = 53/278 (19%)
Query: 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMR-----A 376
++ N+G L+ P E+ P T++ G M A
Sbjct: 10 HVLRVNNGQELHVWETPPKEN--VPFKNNTILIASG------------FARRMDHFAGLA 55
Query: 377 QYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIG 436
+YL + G V++ D+ SI T WL +G +IG
Sbjct: 56 EYLSTNGFHVFRYDSLHHVGLS---SGSIDEFTMTTGKNSLCTVYHWLQTKG---TQNIG 109
Query: 437 LYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSED-------- 488
L S + A + ++ + V D + Y+ LP ++
Sbjct: 110 LIAASLSARV-AYEVISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFE 168
Query: 489 --PVGYEY-------------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA 533
+G E S + V L+ D+ V ++ +
Sbjct: 169 GHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHI-- 226
Query: 534 ARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
++ H + + + + +
Sbjct: 227 RTGHCKLYSLLGSSH--DLGENLVVLRNFYQSVTKAAI 262
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 5e-13
Identities = 37/221 (16%), Positives = 73/221 (33%), Gaps = 28/221 (12%)
Query: 370 NTVDMR--AQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427
+ DM A+ L+ G V+ G + + + + +
Sbjct: 34 SPNDMNFMARALQRSGYGVYVPLFSGHGTV------EPLDILTKGNPDIWWAESSAAVAH 87
Query: 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYM----- 482
AK + ++G S GG + L P + V +P+ + KY
Sbjct: 88 MTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNR 147
Query: 483 --GLPSEDPVGYEY------------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLI 528
G E Y ++V ++ +K + DE V R +L
Sbjct: 148 LAGKSDESTQILAYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLR 207
Query: 529 NALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569
+AL+ A + + D +H+ + +EE + F+++
Sbjct: 208 DALINA-ARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQ 247
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} Length = 398 | Back alignment and structure |
|---|
Score = 64.0 bits (155), Expect = 4e-11
Identities = 36/301 (11%), Positives = 77/301 (25%), Gaps = 55/301 (18%)
Query: 297 LVLPLYEQPLTVPRIKRLQLEPPDI--VQIQANDGTVLYGALYKPDESRYGPPPYKTLIS 354
+ P + IKR Q E + + V + PD P ++
Sbjct: 68 MKFPQIKNSPAPVCIKREQREGYRLEKWEFYPLPKCVSTFLVLIPDN---INKPVPAILC 124
Query: 355 VYGG-----------PCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA 403
+ G + D + + +A +G + +DN
Sbjct: 125 IPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAGEASDLERY 184
Query: 404 SIKHN----------------CGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLS 447
++ N + + W+ Q + I + G+S G
Sbjct: 185 TLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPM 244
Query: 448 AITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGK 507
+ + V + + M +P ++ +S+ H +
Sbjct: 245 MVLGTLDTSI-YAFVYNDFLCQTQ-----ERAEVMTMPDKNGRRPFPNSIRHLIPDFWKN 298
Query: 508 --------------LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH 553
++L G +D ++ R A+V +I + R
Sbjct: 299 FNFPDIVAALAPRPIILTEGGLDRDLDL---VRKAYAIVGTPDNVKIYHYKKFSDPDTRK 355
Query: 554 R 554
Sbjct: 356 N 356
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} Length = 223 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 8e-11
Identities = 40/250 (16%), Positives = 69/250 (27%), Gaps = 42/250 (16%)
Query: 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS 381
V + L G L P+ G ++ +G + V A+ L+
Sbjct: 15 VSVSV-GEVKLKGNLVIPN----GATG--IVLFAHGSGSSRY--SPRNRYV---AEVLQQ 62
Query: 382 KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWS 441
G+ +D + + A + +WL + +G +G S
Sbjct: 63 AGLATLLIDLLTQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGAS 122
Query: 442 YGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHV 501
GG + + A P+ Q VS G P D V
Sbjct: 123 TGGGAALVAAAERPETVQAVVS-----------------RGGRP--DLAPSALPHVKAPT 163
Query: 502 HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEE 561
L+ G D V + AL + ++I P H+ + +
Sbjct: 164 L-------LIVGGYDLPVIAMNED----ALEQLQTSKRLVIIPRASHLFEEPGALTAVAQ 212
Query: 562 RIWEFIERTL 571
E+ L
Sbjct: 213 LASEWFMHYL 222
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 2e-10
Identities = 36/223 (16%), Positives = 61/223 (27%), Gaps = 36/223 (16%)
Query: 373 DMR--AQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA 430
MR A+ G V +G G +E R D + E
Sbjct: 55 SMRPLAEAYAKAGYTVCLPRLKG---HGTHYED-----MERTTFHDWVASVEEGYGWLKQ 106
Query: 431 KVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMG------- 483
+ I + G S GG L+ PD+ A V +
Sbjct: 107 RCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIG 166
Query: 484 ----LPSEDPVGYEY-------------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTAR 526
P + YE + + ++ L+ D V +
Sbjct: 167 SDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADI 226
Query: 527 LINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569
+ + + K EI+ + H+ D+ + ER EF +
Sbjct: 227 IFQGISSTEK--EIVRLRNSYHVATLDYDQPMIIERSLEFFAK 267
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 60.1 bits (145), Expect = 8e-10
Identities = 41/296 (13%), Positives = 79/296 (26%), Gaps = 70/296 (23%)
Query: 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQ 377
P +++ L G + TLI V GG + D + M
Sbjct: 134 PLKSIEVPFEGEL-LPGYAIISE-----DKAQDTLIVVGGGDTSR--EDLF----YMLGY 181
Query: 378 YLRSKGILVWKLDNRGTA---RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGH 434
V +D G +GL FE + ++ A
Sbjct: 182 SGWEHDYNVLMVDLPGQGKNPNQGLHFEVDARA------------AISAILDWYQAPTEK 229
Query: 435 IGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEY 494
I + G+S GGY +A + + + S +D + F L + +
Sbjct: 230 IAIAGFSGGGYFTAQAVEKDKRIKAWIASTPI---YDVAEVFRISFSTALKAPKTILKWG 286
Query: 495 S------------------------------------SVMHHVHKMKGKLLLVHGMIDEN 518
S + + +K+ L + G +++
Sbjct: 287 SKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDS 346
Query: 519 VHFRHTARLINALVAARKPYEILIFPDERHMPRRH---RDRIYMEERIWEFIERTL 571
R + L + + F E H + M +++E++
Sbjct: 347 ELMRQSQVLYDNFKQRGIDVTLRKFSSESGAD-AHCQVNNFRLMHYQVFEWLNHIF 401
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 60.0 bits (145), Expect = 8e-10
Identities = 31/283 (10%), Positives = 65/283 (22%), Gaps = 51/283 (18%)
Query: 312 KRLQLEPPDIVQIQ-ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN 370
+ + I Q++ + + L+ P+ +I G DS
Sbjct: 159 EAAKKSKYIIKQLEIPFEKGKITAHLHLT----NTDKPHPVVIVS-AGL------DSLQT 207
Query: 371 -TVDMRAQYLRSKGILVWKLDNRGTAR-RGLKFEASIKHNCGRIDAEDQLTGA-EWLIKQ 427
+ +L I + +D D L
Sbjct: 208 DMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPL---------TEDYSRLHQAVLNELFSI 258
Query: 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKY------ 481
+GL G+ +GG + + V ++
Sbjct: 259 PYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPKMYLD 318
Query: 482 -----MGLPSEDPVGY-----EYS---SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLI 528
+G D +S K K +L + D + +++
Sbjct: 319 VLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSD-NQMV 377
Query: 529 NALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
K +I + + D +++E L
Sbjct: 378 AFFSTYGKAKKISSKTITQGYE-QSLDLAI------KWLEDEL 413
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} Length = 283 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 8e-09
Identities = 45/258 (17%), Positives = 80/258 (31%), Gaps = 47/258 (18%)
Query: 314 LQLEPPDIVQIQANDGTV-LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTV 372
L + +++ + L G L++PD + +I V GG S+ +
Sbjct: 15 LYFQGMQVIKQKLTATCAQLTGYLHQPDTNA-HQTNLPAIIIVPGG--------SY-THI 64
Query: 373 DMR-----AQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427
+ A G + L+ + A + +D A L++Q
Sbjct: 65 PVAQAESLAMAFAGHGYQAFYLEYTLLTDQQPLGLAPV------LDLGR----AVNLLRQ 114
Query: 428 GLAKVG----HIGLYGWSYGGYLSAITLARFPDVF-------------QCAVSGAPVTSW 470
A+ I G+S GG++ A+ + V G PV S
Sbjct: 115 HAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVIS- 173
Query: 471 DGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINA 530
+ + + P + HV+ + D V +T A
Sbjct: 174 PLLGFPKDDATLATWTPTP---NELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATA 230
Query: 531 LVAARKPYEILIFPDERH 548
L A+ PYE+ +F H
Sbjct: 231 LATAKIPYELHVFKHGPH 248
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} Length = 276 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 8e-09
Identities = 36/245 (14%), Positives = 73/245 (29%), Gaps = 38/245 (15%)
Query: 317 EPPDIVQIQANDGTVLYGALYKPDESRYGP-PPYKTLISVYGGPCVQLVCDSWINTVDMR 375
+ + ND + Y+ R + +I GG + + + R
Sbjct: 12 KLMNKSTFSLNDTAWVD--FYQLQNPRQNENYTFPAIIICPGG--------GYQH-ISQR 60
Query: 376 -----AQYLRSKGILVWKLDNR--GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428
A ++G V L+ +++ + + LI Q
Sbjct: 61 ESDPLALAFLAQGYQVLLLNYTVMNKGTNYNFLSQNLE------EVQA----VFSLIHQN 110
Query: 429 LAKVG----HIGLYGWSYGGYLSAIT-LARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMG 483
+ + L G S GG+L+A + + + PVTS+ +
Sbjct: 111 HKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWP----SDLS 166
Query: 484 LPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIF 543
+ + ++ V + H DE V ++ + + L + P+E F
Sbjct: 167 HFNFEIENISEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFF 226
Query: 544 PDERH 548
H
Sbjct: 227 ESGPH 231
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 Length = 615 | Back alignment and structure |
|---|
Score = 56.7 bits (136), Expect = 1e-08
Identities = 30/166 (18%), Positives = 52/166 (31%), Gaps = 13/166 (7%)
Query: 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISV--YG--GPCVQLVCDSWINTVDMRAQ 377
V I DG L+ + P G +++ Y G +L + +
Sbjct: 28 VMIPMRDGVKLHTVIVLPK----GAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDD 83
Query: 378 YLRSKGILVWKLDNRGT-----ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKV 432
G + D RG + + A D +WL+K
Sbjct: 84 VFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN 143
Query: 433 GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYT 478
G +G+ G SY G+ + L + AV +P+ D ++
Sbjct: 144 GKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDGWMGDDWFN 189
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* Length = 277 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 2e-08
Identities = 21/191 (10%), Positives = 49/191 (25%), Gaps = 32/191 (16%)
Query: 376 AQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVG-- 433
A + + G+ L+ + + ++ I +
Sbjct: 58 ATRMMAAGMHTVVLNYQLIVGDQSVYPWAL------QQLGA----TIDWITTQASAHHVD 107
Query: 434 --HIGLYGWSYGGYLSAITLARFPD--------------VFQCAVSGAPVTSWDGYDTFY 477
I L G+S GG++ A + G PV
Sbjct: 108 CQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGFPTT 167
Query: 478 TEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 537
+ + ++ + V + DE+V ++ + + A++ +
Sbjct: 168 SAARNQITTD----ARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVA 223
Query: 538 YEILIFPDERH 548
+F H
Sbjct: 224 TAYHLFGSGIH 234
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 Length = 273 | Back alignment and structure |
|---|
Score = 53.5 bits (128), Expect = 5e-08
Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 34/184 (18%)
Query: 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSG--------- 464
D ++ L+K+ + +I + G S G LA D +
Sbjct: 97 LYDAVSNITRLVKEK--GLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQ 154
Query: 465 --APVTSWDG-YD--------TFYTEKYMGLPSEDPVGYEYSS------VMHHVHKMKGK 507
V DG Y Y + YE V + +
Sbjct: 155 IVKRVFLLDGIYSLKELLIEYPEYDCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSID 214
Query: 508 LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567
+ LVH DE + R T LI+ L + +++ + H + +Y ++ ++I
Sbjct: 215 MHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLH------NDVYKNGKVAKYI 268
Query: 568 ERTL 571
+
Sbjct: 269 FDNI 272
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A Length = 652 | Back alignment and structure |
|---|
Score = 53.2 bits (127), Expect = 2e-07
Identities = 33/174 (18%), Positives = 54/174 (31%), Gaps = 30/174 (17%)
Query: 322 VQIQANDGTVLYGALYKPDESR----------YGPPPYKTLI-SVYGGPCVQLVCDSWIN 370
V + DG LY + P +R Y + + V D
Sbjct: 40 VMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFV 99
Query: 371 -------TVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEW 423
D+R +Y S+G V G E + DA D + +W
Sbjct: 100 EGGYIRVFQDIRGKY-GSQGDYVMTRPPHGPLNPTKTDETT--------DAWDTV---DW 147
Query: 424 LIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477
L+ G +G+ G SY G+ + L + A +P+ D ++
Sbjct: 148 LVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDGWMGDDWF 201
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 2e-07
Identities = 34/232 (14%), Positives = 73/232 (31%), Gaps = 47/232 (20%)
Query: 370 NTVDMR--AQYLRSKGILVWKLDNRG-----TARRGLKFEASIKHNCGRIDAEDQLTGAE 422
N+ D+R ++L SKG +G + + D + E
Sbjct: 28 NSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQ------DVMNGY---E 78
Query: 423 WLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYT---- 478
+L +G K+ + G S GG ++ L + AP+ +
Sbjct: 79 FLKNKGYEKIA---VAGLSLGGVF-SLKLGYTVPIEGIVTMCAPMYIKSEETMYEGVLEY 134
Query: 479 --------EKYMGLPSEDPVGYEY-------------SSVMHHVHKMKGKLLLVHGMIDE 517
K ++ ++ + V H+ + +V DE
Sbjct: 135 AREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDE 194
Query: 518 NVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569
++ + N + + K +I + H+ +++ + E I+ F+E
Sbjct: 195 MINPDSANIIYNEIESPVK--QIKWYEQSGHVITLDQEKDQLHEDIYAFLES 244
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* Length = 560 | Back alignment and structure |
|---|
Score = 51.6 bits (123), Expect = 5e-07
Identities = 38/275 (13%), Positives = 80/275 (29%), Gaps = 49/275 (17%)
Query: 305 PLTVPRIKRLQLEPPDI-----VQIQANDGTVLYGALYKPDE----------SRYG--PP 347
+ + +Q ++ ++ DG LY +++P++ YG
Sbjct: 22 GINHIVVDSVQYGNQEMIMEKDGTVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNK 81
Query: 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407
P T + + S+ + +V K+ RG+ +
Sbjct: 82 PKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVKVALRGSDKSKGVLS----- 136
Query: 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV 467
+ +AED EW Q + G+IG G SY + P + + +
Sbjct: 137 PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGL 195
Query: 468 TSW------------DGYDTFYTEKYMGLPSEDPV--------------GYEYSSVMHHV 501
G+ F+T+ +++P + +
Sbjct: 196 NDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQVPL 255
Query: 502 HKMKGKLLLVHGMIDENVHFRHTARLINALVAARK 536
++K LL + +H R + + K
Sbjct: 256 SQIKTPLLTCASWSTQGLHNRGSFEGFKQAASEEK 290
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} Length = 241 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 9e-07
Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 19/128 (14%)
Query: 421 AEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEK 480
A W + G + + G+ +GG ++ + A P + + AV+ +Y
Sbjct: 104 ASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQL-KAAVA------------WY--- 146
Query: 481 YMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI 540
G + + + +L ++G D ++ + AL AA EI
Sbjct: 147 --GKLVGEKSLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEI 204
Query: 541 LIFPDERH 548
+++P+ H
Sbjct: 205 VVYPEADH 212
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 2e-06
Identities = 32/214 (14%), Positives = 55/214 (25%), Gaps = 40/214 (18%)
Query: 336 LYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN----TVDMRAQYLRSKGILVWKLDN 391
L+ P+ P + V+GG W+ + A SKG V
Sbjct: 55 LFLPEG-----TPVGLFVFVHGG--------YWMAFDKSSWSHLAVGALSKGWAVAMPSY 101
Query: 392 RGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITL 451
+ + K+ G I L G S GG+L A L
Sbjct: 102 ELCPEV--RISEIT---------QQISQAVTAAAKE---IDGPIVLAGHSAGGHLVARML 147
Query: 452 AR------FPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK 505
+ V +P++ + + D S + ++
Sbjct: 148 DPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMNEKFKM---DADAAIAESPVEMQNRYD 204
Query: 506 GKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539
K+ + G + L+ A A
Sbjct: 205 AKVTVWVGGAERPAFLDQAIWLVEAWDADHVIAF 238
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A Length = 259 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 2e-06
Identities = 32/244 (13%), Positives = 61/244 (25%), Gaps = 47/244 (19%)
Query: 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILV 386
DG + G + P E G L+ G + ++ A+ L +GI
Sbjct: 38 VDGRTVPGVYWSPAE---GSSDRLVLLGHGGT------THKKVEYIEQVAKLLVGRGISA 88
Query: 387 WKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK-------------QGLAKVG 433
+D G R + +DA ++ +
Sbjct: 89 MAIDGPGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPR 148
Query: 434 HIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYE 493
G +G S G + A + + A+ G +
Sbjct: 149 PTGWWGLSMGTMMGLPVTASDKRI-KVALLGLMGVEGVNGEDL----------------- 190
Query: 494 YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH 553
+ ++ + + DE V + L L +K L +H
Sbjct: 191 ----VRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKT---LHVNPGKHSAVPT 243
Query: 554 RDRI 557
+
Sbjct: 244 WEMF 247
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* Length = 318 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 2e-06
Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 7/103 (6%)
Query: 433 GHIGLYGWSYGGYLSAITLARFPDVFQCAV---SGAPV---TSWDGYDTFYT-EKYMGLP 485
+ + G + GGY++A + DVF +G P + Y + P
Sbjct: 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTP 70
Query: 486 SEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLI 528
+ + + + + + + K+ + G D V +L
Sbjct: 71 TANMKSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLK 113
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A Length = 303 | Back alignment and structure |
|---|
Score = 46.5 bits (110), Expect = 1e-05
Identities = 31/232 (13%), Positives = 58/232 (25%), Gaps = 41/232 (17%)
Query: 336 LYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN----TVDMRAQYLRSKGILVWKLDN 391
++ +++ P + V+GG W L +G V +D
Sbjct: 72 VFYSEKTTNQAP---LFVFVHGG--------YWQEMDMSMSCSIVGPLVRRGYRVAVMDY 120
Query: 392 RGTARRGLKFEASIKHNCGRIDAEDQLTGA-EWLIKQGLA-KVGHIGLYGWSYGGYLSAI 449
L + +++ Q T W+ KV + G G +L A
Sbjct: 121 N------LCPQVTLE------QLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQ 168
Query: 450 TLAR-------FPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVH 502
L R + + V + + + E S M +
Sbjct: 169 ILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLESVNPKNILGLNERNIESVSPMLWEY 228
Query: 503 KMKG-----KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549
K+ +V D + + L +F H
Sbjct: 229 TDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHF 280
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 46.2 bits (109), Expect = 1e-05
Identities = 39/218 (17%), Positives = 62/218 (28%), Gaps = 32/218 (14%)
Query: 376 AQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRI--DAEDQLTGAEWLIKQGLAKVG 433
S G+ + D G G F G I E+ L + + VG
Sbjct: 59 DDLAASLGVGAIRFDYSGHGASGGAFR------DGTISRWLEEALAVLDHFKPEKAILVG 112
Query: 434 H--IGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY-----TEKYMGLPS 486
G L A ++ AP + D + E
Sbjct: 113 SSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAELAENGYF 172
Query: 487 EDPVGYEY---------------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINAL 531
E+ Y + VM + + ++ GM D +V ++H +L+ L
Sbjct: 173 EEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHL 232
Query: 532 VAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569
A + + D H R +D M I IE
Sbjct: 233 PADDV--VLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 3e-05
Identities = 68/479 (14%), Positives = 138/479 (28%), Gaps = 166/479 (34%)
Query: 140 DIKTGQRKV----ILVEELDSWVNLHDCFTPLD--KGVTKYSGGFIWASEKTGFRHLYL- 192
D +TG+ + IL D++V+ DC D K + K H+ +
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILS----------KEEIDHIIMS 57
Query: 193 -HDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE 251
++GT + ++ E Q + L ++ +
Sbjct: 58 KDAVSGT--------LRLFWTLLSKQEEMVQKFVEEVLR-------------INYKFLMS 96
Query: 252 APVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRI 311
R +++ D L + ++ V R+
Sbjct: 97 PIKTEQRQPSM-------MTRMYIEQRDRLYNDNQVF---------------AKYNVSRL 134
Query: 312 KR--------LQLEPPDIVQIQANDG---TVLYGALYKPDESRYGPPPYKTLISVYGGPC 360
+ L+L P V I G T + + +K ++
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCL-SYKVQCKMDFK----IF---- 185
Query: 361 VQLVCDSWIN-----TVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAE 415
W+N + + + L+ L++++D T+R ++IK I AE
Sbjct: 186 -------WLNLKNCNSPETVLEMLQK---LLYQIDPNWTSR--SDHSSNIKLRIHSIQAE 233
Query: 416 DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC-------------AV 462
+ + L + ++ + A F + C +
Sbjct: 234 LRRLLKSKPYENCLLVLLNV----QN------AKAWNAF-N-LSCKILLTTRFKQVTDFL 281
Query: 463 SGA---PVTSWDGYDTFYTE-------KYMGLPSED-PVGYEYSSVMHHVHKMKGKLLLV 511
S A ++ T + KY+ +D P ++
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP------------REVLTTNPRR 329
Query: 512 HGMIDENVH--------FRH--TARL-------INALVAA--RKPYEIL-IFPDERHMP 550
+I E++ ++H +L +N L A RK ++ L +FP H+P
Sbjct: 330 LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP 388
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 4e-05
Identities = 81/536 (15%), Positives = 140/536 (26%), Gaps = 203/536 (37%)
Query: 107 DEEYLARVNWMHG---NILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDC 163
+ + ++ + G + V S + F I W+NL +C
Sbjct: 149 PAKNVL-IDGVLGSGKTWVALDVC-LSYKVQCKMDFKI--------------FWLNLKNC 192
Query: 164 FTP---LDKGVTKYSGGFIWASEKTGFRHLYLH-DINGTCLGPITEGDWMVEQIVGVNEA 219
+P L+ L D N T + D + ++
Sbjct: 193 NSPETVLEMLQK-----------------LLYQIDPNWT-----SRSDHSSNIKLRIHSI 230
Query: 220 SGQVYFTGTLDGPLESHLYCAKLYPD--------WNH---------------TLEAPV-- 254
++ L +K Y + N T V
Sbjct: 231 QAEL-----------RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD 279
Query: 255 KLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQ-----PLTVP 309
L+ H+ LDH+ + + L C QD LP + P +
Sbjct: 280 FLSAATTTHI-SLDHHSMTLTP-DEVKSLLLKYLDCRPQD----LP--REVLTTNPRRLS 331
Query: 310 RIKRLQLEPPDIV----QIQAND-GTVL---YGALYKPDESR--YG-----PP----PYK 350
I + + + T++ L +P E R + PP P
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL-EPAEYRKMFDRLSVFPPSAHIPTI 390
Query: 351 TLISVYGGPCVQLVCDSWIN----TVDMRAQYLRSKGILVWKLDNRGTAR-RGLKFEASI 405
L S+ W + V + L LV K T + E +
Sbjct: 391 LL-SLI-----------WFDVIKSDVMVVVNKLHKYS-LVEKQPKESTISIPSIYLELKV 437
Query: 406 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGA 465
K ++ E L H + Y P F
Sbjct: 438 K-----LENEYAL---------------HRSIVD-HY----------NIPKTFD------ 460
Query: 466 PVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDENVHF--- 521
S D + P D Y YS + HH+ ++ + + + M+ + F
Sbjct: 461 ---SDD----------LIPPYLD--QYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQ 505
Query: 522 --RHTARLINA------LVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569
RH + NA + K Y+ I ++ R I +F+ +
Sbjct: 506 KIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNA-------ILDFLPK 554
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 9e-05
Identities = 70/494 (14%), Positives = 137/494 (27%), Gaps = 139/494 (28%)
Query: 56 GKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDL-QCGGTD------QN--- 105
GK+ V + + V + W++L C + Q
Sbjct: 162 GKTWVALDVCLSY--------------KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207
Query: 106 -YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEEL-DSWV----N 159
D + +R + L ++ Q +L+ L K + ++++ + ++ N
Sbjct: 208 QIDPNWTSRSDHSSNIKLR---IHSIQAELRRL-LKSKPYENCLLVLLNVQNAKAWNAFN 263
Query: 160 LHDC---FTPLDKGVTKYSGG-----FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVE 211
L C T K VT + + + L D +
Sbjct: 264 LS-CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD-CRPQD-LPR 320
Query: 212 QIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE-----APVKLTNGKGKHVAV 266
+++ N P + A+ D T + KLT + V
Sbjct: 321 EVLTTN--------------PRRLSI-IAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 267 LDHN-MRN-FVD---FHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDI 321
L+ R F F S P LL + + + + V ++ + L
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTI-LLSLIWFD---VIKSDVMVVVNKLHKYSL----- 416
Query: 322 VQIQANDGTVLYGALY-----KPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRA 376
V+ Q + T+ ++Y K + +++++ Y P DS
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLENEYA---LHRSIVDHYNIPKTF---DSDDLIPPYLD 470
Query: 377 QYLRSKGILVWKLDNRGTARRGLKF----------EASIKHNCGRIDAEDQLTGAEWLIK 426
QY S + L N R F E I+H W
Sbjct: 471 QYFYSH--IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH-----------DSTAWNAS 517
Query: 427 QGLAKV--------GHIGLYGWSYGGYLSAI-----------TLARFPDVFQCAVSGAPV 467
+ +I Y ++AI +++ D+ + A+
Sbjct: 518 GSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALM---- 573
Query: 468 TSWDGYDTFYTEKY 481
+ + E +
Sbjct: 574 ---AEDEAIFEEAH 584
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} Length = 367 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 8e-05
Identities = 27/156 (17%), Positives = 45/156 (28%), Gaps = 15/156 (9%)
Query: 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS 381
V G L LY P G ++ V+ + + AQ +
Sbjct: 71 VTFANRYGITLAADLYLPKN--RGGDRLPAIVIGGPFGAVK------EQSSGLYAQTMAE 122
Query: 382 KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWS 441
+G + D T G + I+ ED +++ IG+ G
Sbjct: 123 RGFVTLAFDPSYTGESGGQPR---NVASPDINTEDFSAAVDFISLLPEVNRERIGVIGIC 179
Query: 442 YGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477
G ++ +A V AV T +D
Sbjct: 180 GWGGMALNAVAVDKRV--KAV--VTSTMYDMTRVMS 211
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} Length = 275 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 5e-04
Identities = 18/120 (15%), Positives = 34/120 (28%), Gaps = 16/120 (13%)
Query: 433 GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGY 492
G L+G GG + L + FQ +P W+ E+ + + +
Sbjct: 152 GKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSIWWNNKSVLEKEENLIIELNNA--- 208
Query: 493 EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP---YEILIFPDERHM 549
K + + L G ++ L L+ ++ E H
Sbjct: 209 ----------KFETGVFLTVGSLEREHMVVGANELSERLLQVNHDKLKFKFYEAEGENHA 258
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 571 | |||
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 100.0 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 100.0 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 100.0 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 100.0 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 100.0 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 100.0 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 100.0 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 100.0 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 100.0 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 100.0 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 100.0 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 100.0 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 100.0 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.94 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.93 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.93 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.93 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.93 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.92 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.92 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.92 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.92 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.92 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.92 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.92 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.92 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.92 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.92 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.91 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.91 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.91 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.91 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.91 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.91 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.9 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.9 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.9 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.9 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.9 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.9 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.9 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.9 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.9 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.89 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.89 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.89 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.89 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.89 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.89 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.89 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.89 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.89 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.89 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.89 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.89 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.89 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.89 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.88 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.88 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.88 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.88 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.88 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.88 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.88 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.88 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.87 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.87 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.87 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.87 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.87 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.87 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.87 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.87 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.86 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.86 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.86 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.86 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.86 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.86 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.86 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.86 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.85 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.85 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.85 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.85 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.84 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.84 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.84 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.84 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.84 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.84 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.83 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.83 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.83 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.83 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.83 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.83 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.83 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.83 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.83 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.83 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.82 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.82 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.82 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.82 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.82 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.82 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.82 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.82 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.82 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.81 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.81 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.81 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.81 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.81 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.81 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.81 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.81 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.81 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.81 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.81 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.8 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.8 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.8 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.8 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.8 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.8 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.8 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.8 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.8 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.79 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.79 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.79 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.79 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.79 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.79 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.79 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.79 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.79 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.79 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.79 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.78 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.78 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.78 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.78 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.78 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.77 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.77 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.77 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.77 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.77 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.77 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.77 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.77 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.77 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.77 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.76 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.76 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.76 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.76 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.76 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.76 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.76 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.76 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.75 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.75 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.75 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.75 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.75 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.75 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.75 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.74 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.74 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.74 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.73 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.73 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.73 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.73 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.72 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.72 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.72 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.72 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.71 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.71 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.71 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.7 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.7 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.69 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.68 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.68 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.66 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.65 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.47 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.65 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.65 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.62 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.62 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.62 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.61 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.6 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.6 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.59 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.59 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.59 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.59 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.58 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.56 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.56 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.54 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.52 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.51 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.49 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.48 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.47 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.47 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.46 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.46 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.45 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.45 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.45 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.45 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 99.42 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.4 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.4 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.4 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.38 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.38 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.38 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 99.36 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.35 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 99.35 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.34 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.33 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.31 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.3 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 99.27 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 99.27 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.26 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 99.2 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 99.18 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.18 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 99.17 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.1 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.09 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 99.09 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.08 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.07 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.07 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.05 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.04 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.04 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 99.03 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.02 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.01 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.0 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 98.99 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.99 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.98 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 98.98 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.97 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.97 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 98.97 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 98.95 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 98.93 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.93 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 98.93 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 98.92 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 98.91 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 98.91 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 98.91 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.9 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 98.88 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 98.88 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 98.88 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 98.86 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 98.85 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.85 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 98.78 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 98.78 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 98.75 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 98.72 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 98.69 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 98.67 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 98.66 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 98.66 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 98.65 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 98.65 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 98.64 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 98.64 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 98.64 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 98.62 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.61 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.59 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 98.58 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 98.57 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.57 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 98.52 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 98.51 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 98.5 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 98.5 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 98.49 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 98.48 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.46 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 98.46 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 98.44 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 98.41 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 98.4 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 98.38 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 98.37 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 98.35 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.35 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 98.35 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 98.34 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 98.32 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 98.32 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 98.31 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 98.3 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 98.3 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 98.29 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 98.26 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 98.25 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 98.25 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 98.24 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 98.24 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 98.24 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 98.23 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 98.23 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 98.22 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 98.21 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 98.21 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 98.2 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 98.19 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 98.17 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 98.17 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 98.16 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 98.14 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 98.14 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 98.13 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 98.13 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 98.12 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 98.1 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 98.1 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 98.09 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 98.07 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.07 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 98.07 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.06 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 98.06 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 98.05 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 98.05 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 98.05 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.03 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.02 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 98.02 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 98.01 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 98.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 98.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 98.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 98.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 98.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 97.98 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 97.98 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 97.94 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 97.93 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 97.92 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 97.91 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 97.9 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 97.9 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 97.89 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 97.89 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 97.88 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 97.87 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 97.87 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.87 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 97.86 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.85 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.85 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 97.84 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 97.83 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 97.83 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.82 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 97.8 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 97.8 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 97.79 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 97.78 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 97.77 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 97.77 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 97.76 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 97.76 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 97.74 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 97.73 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 97.73 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 97.7 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.68 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 97.68 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 97.67 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 97.65 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 97.65 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 97.64 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 97.64 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.64 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 97.61 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 97.61 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 97.61 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 97.61 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 97.59 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.59 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 97.58 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 97.56 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 97.55 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.53 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.53 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.49 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 97.47 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.47 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 97.47 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.46 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 97.46 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 97.45 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 97.45 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 97.45 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 97.45 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.44 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.44 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 97.42 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 97.41 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 97.31 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.31 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.3 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.29 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 97.22 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 97.2 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 97.19 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 97.18 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 97.16 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 97.16 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 97.09 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.08 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.08 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 97.05 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 97.01 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.01 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 96.99 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 96.99 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 96.99 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 96.97 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 96.91 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 96.9 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 96.9 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 96.9 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 96.89 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 96.87 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 96.86 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 96.82 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 96.82 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 96.81 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 96.72 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 96.72 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 96.7 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 96.69 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 96.66 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 96.65 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 96.61 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 96.6 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 96.58 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 96.55 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 96.52 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 96.52 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 96.52 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 96.48 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 96.46 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 96.46 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 96.45 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 96.42 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 96.41 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 96.28 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 96.22 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 96.19 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 96.18 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 96.15 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 96.07 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 96.07 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 95.93 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 95.85 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 95.65 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 95.44 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 95.42 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 95.35 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 95.24 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 95.21 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 95.17 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 95.16 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 95.16 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 95.07 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 95.05 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 94.84 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 94.77 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 94.74 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 94.46 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 94.43 |
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-69 Score=592.55 Aligned_cols=542 Identities=25% Similarity=0.403 Sum_probs=457.3
Q ss_pred eeecccceeeeecc-CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEEC
Q 008274 9 QTHGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSA 87 (571)
Q Consensus 9 ~~~g~~~~~~~~~~-~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl 87 (571)
++||.+||||+||+ .+..+++|||||++|||.+.+.+.++.+.++.+.......+....++|+++|..++...|+++|+
T Consensus 156 ~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~ 235 (740)
T 4a5s_A 156 IYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT 235 (740)
T ss_dssp EEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET
T ss_pred eecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC
Confidence 78999999999996 77899999999999999999999999999887765421126778899999999999999999999
Q ss_pred CC---C---ceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc-------eEEEEEeec
Q 008274 88 AG---G---PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ-------RKVILVEEL 154 (571)
Q Consensus 88 ~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~-------~~~l~~~~~ 154 (571)
++ + +.+++.... .+...+.++..++|||||+.++++.+|.++...|+++|+++|+ .+++..+..
T Consensus 236 ~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~ 312 (740)
T 4a5s_A 236 DSLSSVTNATSIQITAPA---SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMST 312 (740)
T ss_dssp TSCCSSSCCCEEEECCCH---HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECS
T ss_pred CCCCCCCcceEEEecCCc---cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccC
Confidence 99 8 566653310 0012567889999999999999999999988899999999998 334555556
Q ss_pred CCeeeccCCcccCCCCCccCCCe--EE-EEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcC--
Q 008274 155 DSWVNLHDCFTPLDKGVTKYSGG--FI-WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL-- 229 (571)
Q Consensus 155 ~~w~~~~~~~~~~~~~~~~~~d~--~~-~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~-- 229 (571)
..|++..... .+.|++|+ ++ +.++++|+.|||++++++++.++||.+.|++..+.. +|++.|||+++.
T Consensus 313 ~~~v~~~~~~-----~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~--~d~~~i~f~~~~~~ 385 (740)
T 4a5s_A 313 TGWVGRFRPS-----EPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEA--LTSDYLYYISNEYK 385 (740)
T ss_dssp SSCSSSSSCC-----CCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEE--ECSSEEEEEESCGG
T ss_pred CceEccCcCC-----CceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEE--EeCCEEEEEEecCC
Confidence 6776521001 11345554 55 788999999999999999999999999999887754 469999999998
Q ss_pred CCCceeEEEEEEeCCCCCCCCCCCeEecCC-----CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCC
Q 008274 230 DGPLESHLYCAKLYPDWNHTLEAPVKLTNG-----KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQ 304 (571)
Q Consensus 230 ~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~-----~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~ 304 (571)
+++.+++||++++ ++.. ..++||+. ++.+.+++|++|+++++.++++. ||.+++++..+++..+.+..+
T Consensus 386 ~~~~~~~ly~v~~--~g~~---~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~~~~~l~~n 459 (740)
T 4a5s_A 386 GMPGGRNLYKIQL--IDYT---KVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDKGLRVLEDN 459 (740)
T ss_dssp GCTTCBEEEEEET--TEEE---EEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTEEEEEEECC
T ss_pred CCCceeEEEEEEC--CCCC---cceeeccccCCCCCceEEEEECCCCCEEEEEeCCCC-CCEEEEEECCCCcEEEEeccC
Confidence 7788899999998 5531 23478854 46778899999999999999987 899999998777766666665
Q ss_pred CCChhhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCC
Q 008274 305 PLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKG 383 (571)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G 383 (571)
..+...+....++.++.+.+ ..+|..++++++.|++.+ ..+++|+||++||+++.+.+...|...+ ...++ ++|
T Consensus 460 ~~~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P~~~~-~~~~~P~vv~~HGg~~~~~~~~~~~~~~---~~~l~~~~G 534 (740)
T 4a5s_A 460 SALDKMLQNVQMPSKKLDFI-ILNETKFWYQMILPPHFD-KSKKYPLLLDVYAGPCSQKADTVFRLNW---ATYLASTEN 534 (740)
T ss_dssp HHHHHHHTTEECCEEEEEEE-EETTEEEEEEEEECTTCC-TTSCEEEEEECCCCTTCCCCCCCCCCSH---HHHHHHTTC
T ss_pred hhhhhhhhhccCCccEEEEE-ccCCeEEEEEEEeCCCCC-CCCCccEEEEECCCCcccccccccCcCH---HHHHHhcCC
Confidence 55556677777888888888 679999999999998753 3478999999999999876556664333 45555 699
Q ss_pred cEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE
Q 008274 384 ILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS 463 (571)
Q Consensus 384 ~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~ 463 (571)
|+|+++|+||+++++..+.......++...++|+.++++++.+++.+|.+||+|+||||||++++.+++++|++|+++++
T Consensus 535 ~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~ 614 (740)
T 4a5s_A 535 IIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIA 614 (740)
T ss_dssp CEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEE
T ss_pred eEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEE
Confidence 99999999999999999888888888888899999999999988889999999999999999999999999999999999
Q ss_pred cCccCCcccccchhhhhhcCCC--CCChhhhccCCcchhhccCCC-cEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeE
Q 008274 464 GAPVTSWDGYDTFYTEKYMGLP--SEDPVGYEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTARLINALVAARKPYEI 540 (571)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~s~~~~~~~~~~-p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 540 (571)
.+|+.+|..+...+.+++++.| ..+.+.|...++...++++++ |+||+||+.|.+||++++.+++++|+++++++++
T Consensus 615 ~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~ 694 (740)
T 4a5s_A 615 VAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQA 694 (740)
T ss_dssp ESCCCCGGGSBHHHHHHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEE
T ss_pred cCCccchHHhhhHHHHHHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEE
Confidence 9999999999999999999987 777888999999999999997 9999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 541 LIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 541 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++||+++|++...+....+++.+.+||+++|
T Consensus 695 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 725 (740)
T 4a5s_A 695 MWYTDEDHGIASSTAHQHIYTHMSHFIKQCF 725 (740)
T ss_dssp EEETTCCTTCCSHHHHHHHHHHHHHHHHHHT
T ss_pred EEECCCCCcCCCCccHHHHHHHHHHHHHHHc
Confidence 9999999999666778899999999999875
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-60 Score=517.44 Aligned_cols=533 Identities=29% Similarity=0.544 Sum_probs=442.7
Q ss_pred eeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEEC
Q 008274 8 LQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSA 87 (571)
Q Consensus 8 ~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl 87 (571)
.++||.+ +|+||+.+...++|||||++|+|.+.+.+.++.+......... +....++|+++|..+....|+++|+
T Consensus 168 ~~~~g~~--~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~---~~~~~~~y~~~g~~~~~~~l~~~d~ 242 (706)
T 2z3z_A 168 TLVYGQA--VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLE---AESKPLYYPMAGTPSHHVTVGIYHL 242 (706)
T ss_dssp TEEESSC--CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSS---CEEEEECCCBTTSCCCEEEEEEEET
T ss_pred CeEcccc--hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCC---CceEEeeCCCCCCCCCeeEEEEEEC
Confidence 4678888 8999988889999999999999999998888888777665543 6778899999999999999999999
Q ss_pred CCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEE-EeccCccEEEEEEECCCC-ceEEEEEeecCCeeeccCCcc
Q 008274 88 AGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQV-LNRSQTKLKVLKFDIKTG-QRKVILVEELDSWVNLHDCFT 165 (571)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~-~~r~~~~~~i~~~d~~~g-~~~~l~~~~~~~w~~~~~~~~ 165 (571)
++++.+.+... .....++..+.|||||+.+++. .++.++...|+++|+++| +.+.+..+....|.+...
T Consensus 243 ~~~~~~~~~~~------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~--- 313 (706)
T 2z3z_A 243 ATGKTVYLQTG------EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH--- 313 (706)
T ss_dssp TTTEEEECCCC------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS---
T ss_pred CCCceEeeccC------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC---
Confidence 99987766432 1245678899999999977664 566666778999999999 667676555555543110
Q ss_pred cCCCCCccCC--Ce-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 166 PLDKGVTKYS--GG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 166 ~~~~~~~~~~--d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
...+++ |+ +++.++++|..+||.++.+++..+.||.+.+.+.....|+|||+.|+|.+..+++...+||++++
T Consensus 314 ----~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 314 ----PLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp ----CCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred ----CceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 113455 54 88888888999999999888889999998888877556999999999999988776789999998
Q ss_pred CCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEE
Q 008274 243 YPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIV 322 (571)
Q Consensus 243 ~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 322 (571)
.+. ..++|+...+...+++||||+++++.+++...|+.++++++.+++ ...+.... .+....++.++.+
T Consensus 390 --~~~----~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~-~~~~~~~~----~~~~~~~~~~~~~ 458 (706)
T 2z3z_A 390 --KGG----KTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS-HTLLEAKN----PDTGYAMPEIRTG 458 (706)
T ss_dssp --TCC----CCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE-EEEEECC----------CCCCEEEE
T ss_pred --CCC----CceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe-Eeeccccc----hhhhcCCCCcEEE
Confidence 443 567888777778889999999999999999999999999987665 44444321 3455678888999
Q ss_pred EEEcCCC-cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh
Q 008274 323 QIQANDG-TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF 401 (571)
Q Consensus 323 ~~~~~dg-~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~ 401 (571)
.++..+| ..++++++.|++.+ ..+++|+||++|||++.......|......+++.|+++||.|+++|+||+|+++..+
T Consensus 459 ~~~~~~g~~~~~~~~~~P~~~~-~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~ 537 (706)
T 2z3z_A 459 TIMAADGQTPLYYKLTMPLHFD-PAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAF 537 (706)
T ss_dssp EEECTTSSSEEEEEEECCTTCC-TTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCHHH
T ss_pred EEEcCCCCEEEEEEEEeCCCCC-CCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccchhH
Confidence 9999999 89999999998742 236789999999998876544556543333578999999999999999999999887
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhh
Q 008274 402 EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKY 481 (571)
Q Consensus 402 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 481 (571)
.......++...++|+.++++++.+++.+|.++++|+||||||++++.++.++|++|+++++.+|+.+|..+...+.+++
T Consensus 538 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~ 617 (706)
T 2z3z_A 538 EQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAIMYGERY 617 (706)
T ss_dssp HHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSBHHHHHHH
T ss_pred HHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHHhhhhhhh
Confidence 77666666666689999999999888888999999999999999999999999999999999999999988888888888
Q ss_pred cCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHH
Q 008274 482 MGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEE 561 (571)
Q Consensus 482 ~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 561 (571)
++.+..+.+.|...++...+.++++|+|++||+.|.++|++++++++++|.+.+++++++++|+++|.+... ....+.+
T Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~ 696 (706)
T 2z3z_A 618 FDAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGP-DRVHLYE 696 (706)
T ss_dssp HCCTTTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTT-HHHHHHH
T ss_pred cCCcccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcc-cHHHHHH
Confidence 898888888888899999999999999999999999999999999999999999999999999999998554 7788999
Q ss_pred HHHHHHHHhC
Q 008274 562 RIWEFIERTL 571 (571)
Q Consensus 562 ~i~~fl~~~l 571 (571)
.+.+||+++|
T Consensus 697 ~i~~fl~~~l 706 (706)
T 2z3z_A 697 TITRYFTDHL 706 (706)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 9999999986
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-60 Score=523.28 Aligned_cols=542 Identities=25% Similarity=0.409 Sum_probs=436.1
Q ss_pred eeecccceeeeecc-CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEEC
Q 008274 9 QTHGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSA 87 (571)
Q Consensus 9 ~~~g~~~~~~~~~~-~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl 87 (571)
|+||+++|+|+||+ .+...++|||||++|||.+.+.+.+..+.+....... + +....+.|+++|..++...|+++|+
T Consensus 158 ~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~G~~~~~~~l~~~d~ 235 (723)
T 1xfd_A 158 IYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSI-Y-PTVKPYHYPKAGSENPSISLHVIGL 235 (723)
T ss_dssp EEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSS-S-CCCEEEECCBTTSCCCEEEEEEEES
T ss_pred eECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcC-C-CcceeccCCCCCCCCCeeEEEEEEC
Confidence 57999999999996 5678999999999999999888887777776554432 2 5678899999999988899999999
Q ss_pred CCCce-EEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCccc
Q 008274 88 AGGPV-SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTP 166 (571)
Q Consensus 88 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~ 166 (571)
++++. +.++.. ..+.....++..+.|||||+.+++..++.++...|+++|+++|+++.+.......|.+..
T Consensus 236 ~~~~~~~~l~~~---~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~----- 307 (723)
T 1xfd_A 236 NGPTHDLEMMPP---DDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQ----- 307 (723)
T ss_dssp SSSCCCEECCCC---CCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCC-----
T ss_pred CCCceeEEeeCC---ccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEecc-----
Confidence 99874 544321 001112567888999999998888888887778999999999998887765544554310
Q ss_pred CCCCCccCCCe--EEEE-EecCC----ccEEEEEe-CCCce---eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 167 LDKGVTKYSGG--FIWA-SEKTG----FRHLYLHD-INGTC---LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 167 ~~~~~~~~~d~--~~~~-s~~~g----~~~l~~~~-~~~~~---~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
...+.|++|+ +++. ++++| ..+||+++ ..+++ .++||.+.+.+...+.|||||+.|||.++.+++...
T Consensus 308 -~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 386 (723)
T 1xfd_A 308 -NEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRR 386 (723)
T ss_dssp -CCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCC
T ss_pred -CCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcce
Confidence 0011345554 6776 66777 78999999 67777 889998777776655699999999999988755679
Q ss_pred EEEEEEeCCCCCCCCCCCeEecC----CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhh
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTN----GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRI 311 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~----~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~ 311 (571)
+||.+++ ++.. ..++|+. ..+...+++||||+++++.+++++.|+.++. +..+++.+..+..+..+...+
T Consensus 387 ~l~~~~~--~~~~---~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~ 460 (723)
T 1xfd_A 387 QLYSANT--VGNF---NRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVH-NTTDKKKMFDLETNEHVKKAI 460 (723)
T ss_dssp EEEEECS--STTC---CCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEE-ETTTCCEEEEEECCHHHHHHH
T ss_pred EEEEEeC--CCCC---CcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEE-ECCCCCEEEEeccChhhhhhh
Confidence 9999987 4421 3456764 3345677999999999999999999887665 665666655555443233456
Q ss_pred ccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECC
Q 008274 312 KRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDN 391 (571)
Q Consensus 312 ~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 391 (571)
....+..++.+.++..+| ++.++++.|++.+ ..+++|+||++||+++.......|.. ....+.++++||+|+++|+
T Consensus 461 ~~~~~~~~~~~~~~~~~g-~l~~~~~~P~~~~-~~~~~p~vv~~HG~~~~~~~~~~~~~--~~~~~~l~~~G~~vv~~d~ 536 (723)
T 1xfd_A 461 NDRQMPKVEYRDIEIDDY-NLPMQILKPATFT-DTTHYPLLLVVDGTPGSQSVAEKFEV--SWETVMVSSHGAVVVKCDG 536 (723)
T ss_dssp HTSCCCBCCBCCEEETTE-EECCBEEBCSSCC-SSSCEEEEEECCCCTTCCCCCCCCCC--SHHHHHHHTTCCEEECCCC
T ss_pred hhccCCCceEEEEEcCCc-eEEEEEEeCCCCC-CCCccCEEEEEcCCCCccccCccccc--cHHHHHhhcCCEEEEEECC
Confidence 677888899999999999 9999999998742 33688999999999887544444432 2345677889999999999
Q ss_pred CCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC----CCeeEEEEEcCcc
Q 008274 392 RGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF----PDVFQCAVSGAPV 467 (571)
Q Consensus 392 rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~----~~~~~~~v~~~~~ 467 (571)
||+++++..+.......++...++|+.++++++.+++.+|.+|++|+||||||++++.++.++ |++|+++++.+|+
T Consensus 537 rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~ 616 (723)
T 1xfd_A 537 RGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPI 616 (723)
T ss_dssp TTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCC
T ss_pred CCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCC
Confidence 999999988776666666666789999999999988878999999999999999999999999 9999999999999
Q ss_pred CCcccccchhhhhhcCCCCCChhhhccCCcchhhccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCC
Q 008274 468 TSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE 546 (571)
Q Consensus 468 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 546 (571)
.++..+...+.+++++.+....+.+...++...+.+++ +|+||+||++|.++|++++.+++++|++++++++++++|++
T Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 696 (723)
T 1xfd_A 617 TDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDE 696 (723)
T ss_dssp CCTTSSBHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTC
T ss_pred cchHHhhhhccHhhcCCccCChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCC
Confidence 99988877777788888877777788888888999999 79999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 547 RHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 547 ~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+|.+...+....+++.+.+||+++|
T Consensus 697 ~H~~~~~~~~~~~~~~i~~fl~~~l 721 (723)
T 1xfd_A 697 SHYFTSSSLKQHLYRSIINFFVECF 721 (723)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHTTTT
T ss_pred CcccccCcchHHHHHHHHHHHHHHh
Confidence 9998666778889999999999875
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-59 Score=514.62 Aligned_cols=537 Identities=35% Similarity=0.666 Sum_probs=441.5
Q ss_pred eeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEEC
Q 008274 8 LQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSA 87 (571)
Q Consensus 8 ~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl 87 (571)
.+++|+++|+++|++.....++|||||++|+|.+.+...++.+........ ......++|+++|..++...|+++|+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~---~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYAD---RTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSS---CEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCC---cccceEeecCCCCCCCCeeEEEEEEC
Confidence 467899999999998888999999999999999888777665542221111 13356788999999999999999999
Q ss_pred CC-CceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEE-eccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcc
Q 008274 88 AG-GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVL-NRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFT 165 (571)
Q Consensus 88 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~-~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~ 165 (571)
++ ++.+.+... ......+..++| |||+.|++.. ++.++...|+++|+++|+++.+.......|.+...
T Consensus 271 ~~~~~~~~~~~~------~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~--- 340 (741)
T 2ecf_A 271 AEQAQTQWIDLG------KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN--- 340 (741)
T ss_dssp STTCCCEEECCC------SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS---
T ss_pred CCCCceEEecCC------CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC---
Confidence 99 988776442 124567889999 9999777655 46667789999999999998887766555643111
Q ss_pred cCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCC
Q 008274 166 PLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYP 244 (571)
Q Consensus 166 ~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~ 244 (571)
.+.|++|+ +++.++++|..+||.++.+++ .+.||.+.+.+..+..||+||+.|+|.+..+++...+||.+++
T Consensus 341 ----~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~-- 413 (741)
T 2ecf_A 341 ----SLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL-- 413 (741)
T ss_dssp ----CCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET--
T ss_pred ----ceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc--
Confidence 11345555 888888899999999998877 8899998888877766999999999999988766799999997
Q ss_pred CCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCC-Chh-hhccC--CCCCCe
Q 008274 245 DWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPL-TVP-RIKRL--QLEPPD 320 (571)
Q Consensus 245 ~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~-~~~-~~~~~--~~~~~~ 320 (571)
++. ..++|+...+...++|||||+++++.+++...|++++++++ +++.++.++.+.. ... .+... .+..++
T Consensus 414 ~g~----~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 488 (741)
T 2ecf_A 414 QGG----QPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRA-NGEKIATLVENDLADPKHPYARYREAQRPVE 488 (741)
T ss_dssp TCC----CCEECCCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET-TSCEEECSSCCCSSSTTSTTHHHHTTCCCEE
T ss_pred CCC----CeeecccCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc-CCCeEEEeccCcccccccchhhhhccCCCcE
Confidence 554 57788887777788999999999999999999999999997 4555666765543 222 34445 678899
Q ss_pred EEEEEcCCC-cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccch-hhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 321 IVQIQANDG-TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVD-MRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 321 ~~~~~~~dg-~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.+.++..+| ..++++++.|++.. ..+++|+||++||+++.......|..... .+++.|+++||.|+++|+||+|.++
T Consensus 489 ~~~~~~~~g~~~l~~~~~~P~~~~-~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~ 567 (741)
T 2ecf_A 489 FGTLTAADGKTPLNYSVIKPAGFD-PAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRG 567 (741)
T ss_dssp EEEEECTTSSCEEEEEEECCSSCC-TTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSC
T ss_pred EEEEEcCCCCEEEEEEEEeCCCCC-CCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCC
Confidence 999999999 99999999998642 23578999999999887544444542211 3578899999999999999999998
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhh
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYT 478 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 478 (571)
..+.......++...++|+.++++++.+++.+|.++++|+||||||++++.++.++|++|+++++.+|+.++..+...+.
T Consensus 568 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~ 647 (741)
T 2ecf_A 568 RDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDSHYT 647 (741)
T ss_dssp HHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSBHHHH
T ss_pred hhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhccccc
Confidence 88777666677667789999999999998888999999999999999999999999999999999999999887777788
Q ss_pred hhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHH
Q 008274 479 EKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIY 558 (571)
Q Consensus 479 ~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 558 (571)
+++++.+....+.|...+|+..+.++++|+|++||++|.+++++++.+++++|+..+++++++++|+++|.+.... ...
T Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~-~~~ 726 (741)
T 2ecf_A 648 ERYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGAD-ALH 726 (741)
T ss_dssp HHHHCCTGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHH-HHH
T ss_pred hhhcCCcccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCc-hhH
Confidence 8888888777778888899999999999999999999999999999999999999999999999999999985433 378
Q ss_pred HHHHHHHHHHHhC
Q 008274 559 MEERIWEFIERTL 571 (571)
Q Consensus 559 ~~~~i~~fl~~~l 571 (571)
+.+.+.+||+++|
T Consensus 727 ~~~~i~~fl~~~l 739 (741)
T 2ecf_A 727 RYRVAEAFLGRCL 739 (741)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 8999999999875
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-60 Score=517.24 Aligned_cols=540 Identities=24% Similarity=0.402 Sum_probs=432.1
Q ss_pred eeecccceeeeecc-CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEEC
Q 008274 9 QTHGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSA 87 (571)
Q Consensus 9 ~~~g~~~~~~~~~~-~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl 87 (571)
|+||.++|||+||+ .....++|||||++|||.+.+++.++.+.++.+.... + +....++|+++|..++...|+++|+
T Consensus 154 v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~-~-~~~~~~~yp~~g~~~~~~~l~~~d~ 231 (719)
T 1z68_A 154 IFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQ-Y-PRTINIPYPKAGAKNPVVRIFIIDT 231 (719)
T ss_dssp EEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSS-S-CEEEEEECCBTTSCCCEEEEEEEES
T ss_pred eEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCC-C-ccceeecCCCCCCCCCeeEEEEEEC
Confidence 78999999999997 6678999999999999999988888888887776543 3 7778899999999999999999999
Q ss_pred CCCceE---EEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEE----CCCCceEEEEE---eecCCe
Q 008274 88 AGGPVS---WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFD----IKTGQRKVILV---EELDSW 157 (571)
Q Consensus 88 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d----~~~g~~~~l~~---~~~~~w 157 (571)
++++.. .+... ..+.....++..++|||||++++...+|.++..+|+++| +++|+++.++. +....|
T Consensus 232 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~ 308 (719)
T 1z68_A 232 TYPAYVGPQEVPVP---AMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGW 308 (719)
T ss_dssp SCHHHHCCEECCCC---HHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSC
T ss_pred CCCCccceeEccCC---ccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCce
Confidence 998752 33210 001234567889999999887777778887778999999 99988776653 333455
Q ss_pred eeccCCcccCCCCCccCCCe--EEE-EEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcC--CCC
Q 008274 158 VNLHDCFTPLDKGVTKYSGG--FIW-ASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL--DGP 232 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~--~~~-~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~--~~~ 232 (571)
++.... ..+.|++|+ +++ .++++|+.+||++++++++.++||.+.+++..+. ++ +++.|||+++. +++
T Consensus 309 ~~~~~~-----~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~-~~-d~~~i~~~~~~~~~~~ 381 (719)
T 1z68_A 309 AGGFFV-----STPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIF-RV-TQDSLFYSSNEFEEYP 381 (719)
T ss_dssp SSSSSC-----CCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEE-EE-CSSEEEEEESCGGGCT
T ss_pred EccccC-----CccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEE-EE-eCCEEEEEEecCCCCC
Confidence 431000 011345554 555 4667899999999999888899999888877776 44 99999999987 444
Q ss_pred ceeEEEEEEeCCCCCCCCCCCeEecC-----CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCC
Q 008274 233 LESHLYCAKLYPDWNHTLEAPVKLTN-----GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLT 307 (571)
Q Consensus 233 ~~~~l~~~~l~~~g~~~~~~~~~lt~-----~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~ 307 (571)
...+||++++ ++.. .+.++|++ ..+...+++|+||+++++.+++++.| .++++++.+++..+.+..+..+
T Consensus 382 ~~~~l~~~~~--~~g~--~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~ 456 (719)
T 1z68_A 382 GRRNIYRISI--GSYP--PSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKEL 456 (719)
T ss_dssp TCBEEEEEEC--SSSS--CCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHH
T ss_pred ceEEEEEEeC--CCCC--CCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecchhh
Confidence 5699999998 3320 13467774 23556779999999999999888776 7888888777765555554332
Q ss_pred hhhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHH-HhCCcEE
Q 008274 308 VPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYL-RSKGILV 386 (571)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l-~~~G~~v 386 (571)
...+....++.++.+.++..+ .+++++++.|++.+ ..+++|+||++||+++.......|... ++..+ +++||+|
T Consensus 457 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~P~~~~-~~~~~p~vl~~hG~~~~~~~~~~~~~~---~~~~l~~~~G~~v 531 (719)
T 1z68_A 457 ENALKNIQLPKEEIKKLEVDE-ITLWYKMILPPQFD-RSKKYPLLIQVYGGPCSQSVRSVFAVN---WISYLASKEGMVI 531 (719)
T ss_dssp HHHTTSBCCCEEEEEEEEETT-EEEEEEEEECTTCC-SSSCEEEEEEECCCTTBCCCCCCCCCC---HHHHHHHTTCCEE
T ss_pred hhhhccccCCceEEEEEecCC-eEEEEEEEeCCCCC-CCCCccEEEEECCCCCcCcccccchhh---HHHHHHhcCCeEE
Confidence 345666778888999999987 89999999998742 236789999999998876444444322 24445 4799999
Q ss_pred EEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCc
Q 008274 387 WKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAP 466 (571)
Q Consensus 387 ~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~ 466 (571)
+++|+||+|+++..+.......++...++|+.++++++.+++.+|.++++|+||||||++++.++.++|++|+++++.+|
T Consensus 532 ~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 611 (719)
T 1z68_A 532 ALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAP 611 (719)
T ss_dssp EEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESC
T ss_pred EEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCC
Confidence 99999999999988877766666666789999999999998888999999999999999999999999999999999999
Q ss_pred cCCcccccchhhhhhcCCC--CCChhhhccCCcchhhccCCC-cEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEc
Q 008274 467 VTSWDGYDTFYTEKYMGLP--SEDPVGYEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIF 543 (571)
Q Consensus 467 ~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~s~~~~~~~~~~-p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 543 (571)
+.++..+...+.+++++.+ ....+.|...++...+.++++ |+|++||++|.+++++++.+++++|++.+++++++++
T Consensus 612 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 691 (719)
T 1z68_A 612 VSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY 691 (719)
T ss_dssp CCCTTTSBHHHHHHHHCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ccChHHhccccchhhcCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEE
Confidence 9999888777878888877 345567888889899999998 8999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 544 PDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 544 ~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
|+++|.+ ..+....+.+.+.+||+++|
T Consensus 692 ~~~gH~~-~~~~~~~~~~~i~~fl~~~l 718 (719)
T 1z68_A 692 SDQNHGL-SGLSTNHLYTHMTHFLKQCF 718 (719)
T ss_dssp TTCCTTC-CTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCC-CcccHHHHHHHHHHHHHHhh
Confidence 9999998 55668889999999999875
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-50 Score=439.35 Aligned_cols=482 Identities=16% Similarity=0.184 Sum_probs=371.1
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCC------CceEEEecc
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG------GPVSWMDLQ 98 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~------~~~~~~~~~ 98 (571)
...+.|||||++|+|++.+.... +.......|+++|+++ ++.+.+..
T Consensus 132 ~~~~~~spDg~~l~~~~~~~~~~--------------------------~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~- 184 (662)
T 3azo_A 132 WADPVLLPERGEVWCMAEEFTGE--------------------------GPSDVRRFLAAVPLDGSAAADRSAVRELSD- 184 (662)
T ss_dssp EEEEEEETTTTEEEEEEEEECSS--------------------------STTCEEEEEEEEETTSTTTTCGGGSEESSC-
T ss_pred ccCcEECCCCCEEEEEEecccCC--------------------------CCCCceeEEEEEECCCCccccCCceeEEEe-
Confidence 45788999999999987652210 0112345799999998 77776630
Q ss_pred CCCCCCCCCCceeEEEEEccCCeEEEEEEeccC----ccEEEEEEECC-CC---ceEEEEEeecCCeeeccCCcccCCCC
Q 008274 99 CGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ----TKLKVLKFDIK-TG---QRKVILVEELDSWVNLHDCFTPLDKG 170 (571)
Q Consensus 99 ~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~----~~~~i~~~d~~-~g---~~~~l~~~~~~~w~~~~~~~~~~~~~ 170 (571)
........++|||||+.|++.+.... ....|+++|++ +| +.++|+..... .. ..+
T Consensus 185 -------~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~-~~-----~~~---- 247 (662)
T 3azo_A 185 -------DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE-AI-----AQA---- 247 (662)
T ss_dssp -------SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB-CE-----EEE----
T ss_pred -------cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc-eE-----cce----
Confidence 23456677899999999988775432 23679999999 57 66666653211 11 011
Q ss_pred CccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEE--------EEEEeecCcEEEEEEcCCCCceeEEEEEE
Q 008274 171 VTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQ--------IVGVNEASGQVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 171 ~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~--------~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 241 (571)
.|++|+ ++|.++++|..+||++++++++.++|+.+...+.. ...++++++ ++|+++. + ..+||.++
T Consensus 248 -~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~--~~~l~~~d 322 (662)
T 3azo_A 248 -EWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-G--AAVLGILD 322 (662)
T ss_dssp -EECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS-S--SCEEEEEE
T ss_pred -EECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCE-EEEEEEc-C--ccEEEEEE
Confidence 345554 88888888888999999988888888875433211 123556665 6666666 5 48999999
Q ss_pred eCCCCCCCCCCCeEecCCCceEEEEE-CCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCe
Q 008274 242 LYPDWNHTLEAPVKLTNGKGKHVAVL-DHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPD 320 (571)
Q Consensus 242 l~~~g~~~~~~~~~lt~~~g~~~~~~-s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 320 (571)
+ ++. ..++|+...+... .+ +++++.++++.++...|+.+|++++.+++ .+.|+.... ..+....+..++
T Consensus 323 ~--~~~----~~~~l~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~-~~~l~~~~~--~~~~~~~~~~~~ 392 (662)
T 3azo_A 323 P--ESG----ELVDAAGPWTEWA-ATLTVSGTRAVGVAASPRTAYEVVELDTVTGR-ARTIGARHT--DPVDPAYYPEPQ 392 (662)
T ss_dssp T--TTT----EEEECCSSCCEEE-EEEEEETTEEEEEEEETTEEEEEEEEETTTCC-EEEEESCCC--CSSCGGGSCCCE
T ss_pred C--CCC----cEEEecCCCCeEE-EEEecCCCEEEEEEcCCCCCCEEEEEECCCCc-eEEeecCCc--ccCCccccCcce
Confidence 8 443 5667776544333 44 78888999999999999999999986665 455654322 334555677889
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCC---CCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 321 IVQIQANDGTVLYGALYKPDESR---YGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~---~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
.+.++..+|..++++++.|++.+ ...+++|+||++||+++.... ..+...++.|+++||.|+++|+||++++
T Consensus 393 ~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~-----~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 467 (662)
T 3azo_A 393 IRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVP-----AVLDLDVAYFTSRGIGVADVNYGGSTGY 467 (662)
T ss_dssp EEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCC-----CSCCHHHHHHHTTTCEEEEEECTTCSSS
T ss_pred EEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCc-----ccchHHHHHHHhCCCEEEEECCCCCCCc
Confidence 99999989999999999998642 023578999999999876531 2345568899999999999999999999
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc---
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD--- 474 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--- 474 (571)
|..+.......++..+++|+.++++++++++.+|.++++|+||||||++++.++.+ |++|+++++.+|+.++..+.
T Consensus 468 G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~ 546 (662)
T 3azo_A 468 GRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADGG 546 (662)
T ss_dssp CHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTTC
T ss_pred cHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhccc
Confidence 98887766666666778999999999999988899999999999999999998885 99999999999998864321
Q ss_pred -----chhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 475 -----TFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 475 -----~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
..+.+.+++.+.+..+.|...+|+..+.++++|+|++||++|.+||+.++++++++|++.+++++++++|+++|+
T Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~ 626 (662)
T 3azo_A 547 THDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHG 626 (662)
T ss_dssp SCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSS
T ss_pred ccchhhHhHHHHhCCCccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCC
Confidence 223445556655677888889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHhC
Q 008274 550 PRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 550 ~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+...++...+.+.+++||+++|
T Consensus 627 ~~~~~~~~~~~~~~~~fl~~~l 648 (662)
T 3azo_A 627 FRRKETMVRALEAELSLYAQVF 648 (662)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHHHHHHHh
Confidence 8666778889999999999875
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-47 Score=414.36 Aligned_cols=452 Identities=14% Similarity=0.101 Sum_probs=338.2
Q ss_pred EEEEEEECCCCce--EEEeccCCCCCCCC-CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCC--ceEEEEEeec
Q 008274 80 VRLGVVSAAGGPV--SWMDLQCGGTDQNY-DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTG--QRKVILVEEL 154 (571)
Q Consensus 80 ~~l~~~dl~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g--~~~~l~~~~~ 154 (571)
.+||++++.+++. +.+... .+ .+.....+.|||||+.|++...+.....+||++|++++ +.++|+....
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~------~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~ 281 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGA------IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD 281 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESC------SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS
T ss_pred cEEEEEECCCCcccceEEEec------CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC
Confidence 5688888887654 333221 11 12345678999999998888776655568999999887 5666765433
Q ss_pred CCeeeccCCcccCCCCCccCCCeEEEEEecCC-ccEEEEEeCCCcee---eceeecCeEEEEEEEEeecCcEEEEEEcCC
Q 008274 155 DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG-FRHLYLHDINGTCL---GPITEGDWMVEQIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 155 ~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g-~~~l~~~~~~~~~~---~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~ 230 (571)
..+.. + ..+++.++|.+++++ ..+|+.++++++.. +.|+.....+. .|+++++.|++....+
T Consensus 282 ~~~~~----~-------~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~---~~s~~g~~lv~~~~~~ 347 (693)
T 3iuj_A 282 ADVSL----V-------DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL---TVHSGSGYLFAEYMVD 347 (693)
T ss_dssp SCEEE----E-------EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE---EEEEETTEEEEEEEET
T ss_pred ceEEE----E-------eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE---EEEEECCEEEEEEEEC
Confidence 22110 0 123456888888765 57899999987654 56666543332 5899999999999877
Q ss_pred CCceeEEEEEEeCCCCCCCCCCCeEecCC-Cce-EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCCh
Q 008274 231 GPLESHLYCAKLYPDWNHTLEAPVKLTNG-KGK-HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTV 308 (571)
Q Consensus 231 ~~~~~~l~~~~l~~~g~~~~~~~~~lt~~-~g~-~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~ 308 (571)
+. .+|+.+++ +|. ..+.++.. .+. ..++++++++.+++.+++.++|+.+|.+++.+++ .+.+.....
T Consensus 348 g~--~~l~~~d~--~g~----~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~-~~~l~~~~~-- 416 (693)
T 3iuj_A 348 AT--ARVEQFDY--EGK----RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA-ISLYRASAA-- 416 (693)
T ss_dssp TE--EEEEEECT--TSC----EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC-EEEEECCCS--
T ss_pred Ce--eEEEEEEC--CCC----eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe-EEEEEeCCC--
Confidence 63 78888888 553 44556543 233 2336678999999999999999999999987665 455554322
Q ss_pred hhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEE
Q 008274 309 PRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWK 388 (571)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 388 (571)
.+....+ .++.+.+++.||..++++++.|++.. ..++.|+||++|||++... ...+...+..|+++||+|+.
T Consensus 417 -~~~~~~~-~~~~~~~~~~dg~~i~~~l~~p~~~~-~~~~~P~ll~~hGg~~~~~-----~~~~~~~~~~l~~~G~~v~~ 488 (693)
T 3iuj_A 417 -PFKPEDY-VSEQRFYQSKDGTRVPLIISYRKGLK-LDGSNPTILYGYGGFDVSL-----TPSFSVSVANWLDLGGVYAV 488 (693)
T ss_dssp -SCCGGGE-EEEEEEEECTTSCEEEEEEEEESSCC-CSSCCCEEEECCCCTTCCC-----CCCCCHHHHHHHHTTCEEEE
T ss_pred -CcChhhC-eeEEEEEecCCCcEEEEEEEecCCCC-CCCCccEEEEECCCCCcCC-----CCccCHHHHHHHHCCCEEEE
Confidence 1332223 57889999999999999999998642 2367899999999977643 22344456788899999999
Q ss_pred ECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 389 LDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 389 ~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
+|+||++++|..|........+...++|+.+++++|++++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.
T Consensus 489 ~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~ 568 (693)
T 3iuj_A 489 ANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVL 568 (693)
T ss_dssp ECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCC
T ss_pred EeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcc
Confidence 99999999999998877666666678999999999999988999999999999999999999999999999999999999
Q ss_pred Ccccccch-----hhhhhcCCCCCChh---hhccCCcchhhcc-CCCc-EEEEecCCCCCCChHHHHHHHHHHHHc---C
Q 008274 469 SWDGYDTF-----YTEKYMGLPSEDPV---GYEYSSVMHHVHK-MKGK-LLLVHGMIDENVHFRHTARLINALVAA---R 535 (571)
Q Consensus 469 ~~~~~~~~-----~~~~~~g~~~~~~~---~~~~~s~~~~~~~-~~~p-~lli~G~~D~~v~~~~~~~~~~~l~~~---~ 535 (571)
++..+... +.. .+|.|..... .+...+|+.++.+ ++.| +||+||+.|.+|++.++.+++++|++. +
T Consensus 569 d~~~~~~~~~~~~~~~-~~g~p~~~~~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~ 647 (693)
T 3iuj_A 569 DMLRYHTFTAGTGWAY-DYGTSADSEAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGP 647 (693)
T ss_dssp CTTTGGGSGGGGGCHH-HHCCTTSCHHHHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSS
T ss_pred hhhhhccCCCchhHHH-HcCCccCHHHHHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCC
Confidence 87654331 112 2366654433 4567899999999 8887 999999999999999999999999998 4
Q ss_pred CCeeEEEcCCCCCCCCCC-CcHHHHHHHHHHHHHHhC
Q 008274 536 KPYEILIFPDERHMPRRH-RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 536 ~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~~~l 571 (571)
.++++++++++||++... .+.....+.+++||.++|
T Consensus 648 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 684 (693)
T 3iuj_A 648 HPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEM 684 (693)
T ss_dssp SCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHc
Confidence 799999999999998553 567788889999999875
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-49 Score=419.36 Aligned_cols=452 Identities=20% Similarity=0.222 Sum_probs=350.6
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||+.++|++..... +.+||+++++.+++...
T Consensus 113 ~~~~~s~dg~~~~~~s~~~~~-----------------------------------~~l~d~~~g~~~~l~~~------- 150 (582)
T 3o4h_A 113 RILSGVDTGEAVVFTGATEDR-----------------------------------VALYALDGGGLRELARL------- 150 (582)
T ss_dssp EEEEEEECSSCEEEEEECSSC-----------------------------------EEEEEEETTEEEEEEEE-------
T ss_pred eeeeeCCCCCeEEEEecCCCC-----------------------------------ceEEEccCCcEEEeecC-------
Confidence 356899999999887654222 24679999988777542
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
.. ..+.|||||+.|++.+.+..+...||++|+++|+.++|+.... .. ..+ .|++|+ .++.+++
T Consensus 151 --~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~--~~-~~~---------~~SpDG~~l~~~~~ 214 (582)
T 3o4h_A 151 --PG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG--SF-SSA---------SISPGMKVTAGLET 214 (582)
T ss_dssp --SS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSC--EE-EEE---------EECTTSCEEEEEEC
T ss_pred --CC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCC--cc-ccc---------eECCCCCEEEEccC
Confidence 11 5689999999999888776555679999999999988754321 11 111 456665 5557778
Q ss_pred CCccEEEEEeCCCceeeceeecCeEEEEE-------EEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec
Q 008274 185 TGFRHLYLHDINGTCLGPITEGDWMVEQI-------VGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT 257 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~~~~~~~~-------~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt 257 (571)
+|..+||++++++++.+.++.....+..+ ..||||| .++|+++.++ ..+||.+ | +..+ +
T Consensus 215 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g--~~~l~~~-----g-----~~~~-~ 280 (582)
T 3o4h_A 215 AREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREG--RSAVFID-----G-----ERVE-A 280 (582)
T ss_dssp SSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETT--EEEEEET-----T-----EEEC-C
T ss_pred CCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCC--cEEEEEE-----C-----Ceec-c
Confidence 88899999999998877444433222221 1299999 7888888776 4788876 2 1122 1
Q ss_pred CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEEEEcCCCcEEEEEEE
Q 008274 258 NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALY 337 (571)
Q Consensus 258 ~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~ 337 (571)
.......+++| ||+. +++.++..+|++++++++. + +.+.|. ..+.. ...+...+.+.++..+|.+++++++
T Consensus 281 ~~~~v~~~~~s-dg~~-l~~~s~~~~p~~l~~~d~~-~-~~~~l~----~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~ 351 (582)
T 3o4h_A 281 PQGNHGRVVLW-RGKL-VTSHTSLSTPPRIVSLPSG-E-PLLEGG----LPEDL-RRSIAGSRLVWVESFDGSRVPTYVL 351 (582)
T ss_dssp CSSEEEEEEEE-TTEE-EEEEEETTEEEEEEEETTC-C-EEECCC----CCHHH-HHTEEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCceEEEEec-CCEE-EEEEcCCCCCCeEEEEcCC-C-ceEEEe----cCCcc-ccccCcceEEEEECCCCCEEEEEEE
Confidence 22234566888 7764 5778888999999999874 3 455551 11111 1456678999999999999999999
Q ss_pred cCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhH
Q 008274 338 KPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQ 417 (571)
Q Consensus 338 ~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~ 417 (571)
.|++.. +++|+||++||+++... ...|...++.|+++||.|+++|+||++++|..+.......++...++|+
T Consensus 352 ~p~~~~---~~~p~vv~~HG~~~~~~-----~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~d~ 423 (582)
T 3o4h_A 352 ESGRAP---TPGPTVVLVHGGPFAED-----SDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDV 423 (582)
T ss_dssp EETTSC---SSEEEEEEECSSSSCCC-----CSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHH
T ss_pred cCCCCC---CCCcEEEEECCCccccc-----ccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhcccccHHHH
Confidence 998642 37899999999887643 1234567899999999999999999999998887777677777778999
Q ss_pred HHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc-------hhhhhhcCCCCCChh
Q 008274 418 LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT-------FYTEKYMGLPSEDPV 490 (571)
Q Consensus 418 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~ 490 (571)
.++++++.++..+| +++|+|||+||++++.++.++|++|+++++.+|+.++..+.. .+.+.+++ .+.+
T Consensus 424 ~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 498 (582)
T 3o4h_A 424 SAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTG---GSRE 498 (582)
T ss_dssp HHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHHHHHHHHHTT---TCHH
T ss_pred HHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccchhHHHHHHHcC---cCHH
Confidence 99999999997777 999999999999999999999999999999999998754221 13445554 5677
Q ss_pred hhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 491 GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 491 ~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+...+|+..+.++++|+|++||++|.++|++++++++++|++++++++++++|+++|.+...++...+.+.+.+||+++
T Consensus 499 ~~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 578 (582)
T 3o4h_A 499 IMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQ 578 (582)
T ss_dssp HHHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999876677889999999999987
Q ss_pred C
Q 008274 571 L 571 (571)
Q Consensus 571 l 571 (571)
|
T Consensus 579 l 579 (582)
T 3o4h_A 579 R 579 (582)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-46 Score=407.06 Aligned_cols=491 Identities=15% Similarity=0.138 Sum_probs=356.8
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceE--EEeccCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVS--WMDLQCGGT 102 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~--~~~~~~~~~ 102 (571)
...+.|||||++|+|.+.+...... .+. ....+-..+|+++++.+++.. .+...
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~------~~~--------------~~~~~~~~~v~~~~l~t~~~~~~~v~~~---- 228 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKS------DGT--------------ETSTNLHQKLYYHVLGTDQSEDILCAEF---- 228 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCC------SSS--------------CCCCCCCCEEEEEETTSCGGGCEEEECC----
T ss_pred cceEEEEeCCCEEEEEEECCccccc------ccc--------------ccccCCCCEEEEEECCCCcccceEEecc----
Confidence 4679999999999998865432100 000 000111247999999987642 22111
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCc-cEEEEEEECCC------C--ceEEEEEeecCCeeeccCCcccCCCCCcc
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQT-KLKVLKFDIKT------G--QRKVILVEELDSWVNLHDCFTPLDKGVTK 173 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~-~~~i~~~d~~~------g--~~~~l~~~~~~~w~~~~~~~~~~~~~~~~ 173 (571)
.+.......+.|||||+.|++...+... ...||++|+++ | +.+.|+........ .|. .
T Consensus 229 --~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~----~~s-------~ 295 (710)
T 2xdw_A 229 --PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD----YVT-------N 295 (710)
T ss_dssp --TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE----EEE-------E
T ss_pred --CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE----EEe-------c
Confidence 1123456789999999999888776543 56899999987 6 46666543322111 011 1
Q ss_pred CCCeEEEEEecCC-ccEEEEEeCCCce---eeceeec-C-eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 174 YSGGFIWASEKTG-FRHLYLHDINGTC---LGPITEG-D-WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 174 ~~d~~~~~s~~~g-~~~l~~~~~~~~~---~~~lT~~-~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
+++.+++.+++++ ..+|++++++++. .+.|+.+ . ..+..+ .|+ +++.|++++..++. .+|+.+++. +|.
T Consensus 296 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~-~~~-~~~~lv~~~~~~g~--~~l~~~~~~-~g~ 370 (710)
T 2xdw_A 296 EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWV-ACV-RSNFLVLCYLHDVK--NTLQLHDLA-TGA 370 (710)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEE-EEE-TTTEEEEEEEETTE--EEEEEEETT-TCC
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEE-EEE-cCCEEEEEEEECCE--EEEEEEECC-CCC
Confidence 3445888887754 6789999988764 3666654 2 244444 376 56778888877763 789998872 232
Q ss_pred CCCCCCeEecCCCce-EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce-eEeccCCCCChhhhccCCCCCCeEEEEE
Q 008274 248 HTLEAPVKLTNGKGK-HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL-VLPLYEQPLTVPRIKRLQLEPPDIVQIQ 325 (571)
Q Consensus 248 ~~~~~~~~lt~~~g~-~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 325 (571)
..+.|+...+. ..++++++++.+++.+++.++|+.+|++++.+++. .+.+..... ..+.... ..++.+.++
T Consensus 371 ----~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~--~~~~~~~-~~~~~~~~~ 443 (710)
T 2xdw_A 371 ----LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTV--KGIDASD-YQTVQIFYP 443 (710)
T ss_dssp ----EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCC--TTCCGGG-EEEEEEEEE
T ss_pred ----EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeeccc--CCcCccc-cEEEEEEEE
Confidence 34566654443 34578899999999999999999999999977662 344433221 1222222 356889999
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHH
Q 008274 326 ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 326 ~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
+.||.+++++++.|++.. ..++.|+||++|||++... ...+......|++ +||+|+++|+||+|++|..|...
T Consensus 444 ~~dg~~i~~~~~~p~~~~-~~~~~P~vl~~hGg~~~~~-----~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~ 517 (710)
T 2xdw_A 444 SKDGTKIPMFIVHKKGIK-LDGSHPAFLYGYGGFNISI-----TPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKG 517 (710)
T ss_dssp CTTSCEEEEEEEEETTCC-CSSCSCEEEECCCCTTCCC-----CCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHT
T ss_pred cCCCCEEEEEEEecCCCC-CCCCccEEEEEcCCCCCcC-----CCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHh
Confidence 999999999999998742 2367899999999987653 1123333456777 99999999999999999988876
Q ss_pred HhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch-----hhh
Q 008274 405 IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF-----YTE 479 (571)
Q Consensus 405 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~ 479 (571)
.....+...++|+.+++++|++++.+|.+|++|+|+|+||++++.++.++|++|+++|+.+|+.++..+... +..
T Consensus 518 ~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~ 597 (710)
T 2xdw_A 518 GILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTT 597 (710)
T ss_dssp TSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHH
T ss_pred hhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCCChhHHH
Confidence 655555566899999999999998899999999999999999999999999999999999999987654321 222
Q ss_pred hhcCCCCC--ChhhhccCCcchhhc-----cCCC-cEEEEecCCCCCCChHHHHHHHHHHHHc-------CCCeeEEEcC
Q 008274 480 KYMGLPSE--DPVGYEYSSVMHHVH-----KMKG-KLLLVHGMIDENVHFRHTARLINALVAA-------RKPYEILIFP 544 (571)
Q Consensus 480 ~~~g~~~~--~~~~~~~~s~~~~~~-----~~~~-p~lli~G~~D~~v~~~~~~~~~~~l~~~-------~~~~~~~~~~ 544 (571)
.+ +.+.. ..+.+...+|+.++. +++. |+||+||++|.+|++.++.+++++|++. +.++++++++
T Consensus 598 ~~-g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 676 (710)
T 2xdw_A 598 DY-GCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDT 676 (710)
T ss_dssp HH-CCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEES
T ss_pred hC-CCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeC
Confidence 23 44422 123456778998888 7886 9999999999999999999999999988 8899999999
Q ss_pred CCCCCCCCC-CcHHHHHHHHHHHHHHhC
Q 008274 545 DERHMPRRH-RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 545 ~~~H~~~~~-~~~~~~~~~i~~fl~~~l 571 (571)
++||++... .......+.+++||.++|
T Consensus 677 ~~gH~~~~~~~~~~~~~~~~~~fl~~~l 704 (710)
T 2xdw_A 677 KAGHGAGKPTAKVIEEVSDMFAFIARCL 704 (710)
T ss_dssp SCCSSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 999998554 345788899999998874
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-46 Score=405.24 Aligned_cols=511 Identities=14% Similarity=0.080 Sum_probs=356.0
Q ss_pred CceEEEC-CCCCeEEEEEEeCCCCC--eEEEeecCC-CC------------CCCCCcccccCCCCCCCCceEEEEEEECC
Q 008274 25 KTGYWWS-LDSKFIAFTQVDSSEIP--RFRIMHQGK-SS------------VGSEAQEDHAYPFAGASNVKVRLGVVSAA 88 (571)
Q Consensus 25 ~~~~~wS-PDg~~iay~~~~~~~~~--~~~~~~~~~-~~------------~~~~~~~~~~y~~~g~~~~~~~l~~~dl~ 88 (571)
...+.|| |||++|||+....+... .+.+...++ .. .+.++...+.|..........+||++++.
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lg 255 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMG 255 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETT
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECC
Confidence 3568999 99999999876544322 222222222 11 01122222222211111112578999998
Q ss_pred CCceE-EEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCC--ce--EEEEEeecC-CeeeccC
Q 008274 89 GGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTG--QR--KVILVEELD-SWVNLHD 162 (571)
Q Consensus 89 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g--~~--~~l~~~~~~-~w~~~~~ 162 (571)
+++.. .+..+ .....+...+.|||||+.|++...+. ...+||++|++++ +. +.|+..... .|.
T Consensus 256 t~~~~~~lv~~------~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s---- 324 (751)
T 2xe4_A 256 KLQSEDVCLYE------EHNPLFSAFMYKAADTNTLCIGSQSP-ETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD---- 324 (751)
T ss_dssp SCGGGCEEEEE------CCCTTCEEEEEECTTSSEEEEEEECS-SCEEEEEEESSSCTTCCCEEESSCCCTTCCEE----
T ss_pred CCchhcEEEEe------cCCCceEEEEEECCCCCEEEEEecCC-CCceEEEEECCCCCCCceeEEeecCCCCceEE----
Confidence 87532 12111 11234566799999999888887654 4678999999986 34 555432211 121
Q ss_pred CcccCCCCCc-cCCCeEEEEEecC--CccEEEEEeCCC-ceeec-eeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 163 CFTPLDKGVT-KYSGGFIWASEKT--GFRHLYLHDING-TCLGP-ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 163 ~~~~~~~~~~-~~~d~~~~~s~~~--g~~~l~~~~~~~-~~~~~-lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
+ . ..++.|+|.++++ +..+||.+++++ ++.+. |....+++. +..++.+++.|+|....++. .+|
T Consensus 325 ---~-----~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~-l~~~~~~~~~lv~~~~~~g~--~~l 393 (751)
T 2xe4_A 325 ---V-----QMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVF-MESIAVRSNYLVVAGRRAGL--TRI 393 (751)
T ss_dssp ---E-----EEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEE-EEEEEECSSEEEEEEEETTE--EEE
T ss_pred ---E-----eeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcE-EEEEEEECCEEEEEEEeCCE--EEE
Confidence 1 1 1244588888886 688999999875 45555 554443322 22366678899999988774 888
Q ss_pred EEEEeCC-----CCCCCCCC-CeEecCCCceEEEEE------CCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCC
Q 008274 238 YCAKLYP-----DWNHTLEA-PVKLTNGKGKHVAVL------DHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQP 305 (571)
Q Consensus 238 ~~~~l~~-----~g~~~~~~-~~~lt~~~g~~~~~~------s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~ 305 (571)
+.+++.. ++. . .+.|+.........+ +.+++.+++++++.++|+.+|.+++.+++ .+.|....
T Consensus 394 ~~~dl~~~~~~~~~g----~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~-~~~l~~~~ 468 (751)
T 2xe4_A 394 WTMMADSQDGVFKAG----TGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS-RTAVKVRE 468 (751)
T ss_dssp EEEECCTTTSCCCTT----TCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC-EEEEEECC
T ss_pred EEEecccccccccCC----ccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc-EEEEeccc
Confidence 8888610 222 3 566654332222344 56888999999999999999999987665 45555432
Q ss_pred CChhhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcE
Q 008274 306 LTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGIL 385 (571)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~ 385 (571)
. ...+....+ .++.+.+++.||..++++++.|++.+ ..++.|+||++|||++... .. .|....+.|+++||+
T Consensus 469 ~-~~~~~~~~~-~~~~~~~~s~dG~~i~~~l~~p~~~~-~~~~~P~vl~~HGg~~~~~-~~----~~~~~~~~l~~~G~~ 540 (751)
T 2xe4_A 469 V-GGGFDAANY-KVERRFATAPDQTKIPLSVVYHKDLD-MSQPQPCMLYGYGSYGLSM-DP----QFSIQHLPYCDRGMI 540 (751)
T ss_dssp C-CTTCCGGGE-EEEEEEEECTTCCEEEEEEEEETTSC-TTSCCCEEEECCCCTTCCC-CC----CCCGGGHHHHTTTCE
T ss_pred c-ccCCCccce-EEEEEEEECCCCcEEEEEEEcCCCCC-CCCCccEEEEECCCCCcCC-CC----cchHHHHHHHhCCcE
Confidence 1 112332233 47889999999999999999998642 2367899999999987653 12 233456789999999
Q ss_pred EEEECCCCCCCChhhhHH-HHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEc
Q 008274 386 VWKLDNRGTARRGLKFEA-SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSG 464 (571)
Q Consensus 386 v~~~d~rG~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~ 464 (571)
|+.+|+||++++|..|.. ......+...++|+.+++++|++++.+|++||+|+|+|+||+++++++.++|++|+++|+.
T Consensus 541 v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~ 620 (751)
T 2xe4_A 541 FAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAG 620 (751)
T ss_dssp EEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEE
T ss_pred EEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEe
Confidence 999999999999998887 6655556667899999999999998899999999999999999999999999999999999
Q ss_pred CccCCccccc-----chhhh--hhcCCCCCChh---hhccCCcchhhccCCCc-EEEEecCCCCCCChHHHHHHHHHHHH
Q 008274 465 APVTSWDGYD-----TFYTE--KYMGLPSEDPV---GYEYSSVMHHVHKMKGK-LLLVHGMIDENVHFRHTARLINALVA 533 (571)
Q Consensus 465 ~~~~~~~~~~-----~~~~~--~~~g~~~~~~~---~~~~~s~~~~~~~~~~p-~lli~G~~D~~v~~~~~~~~~~~l~~ 533 (571)
+|+.++..+. ..... ..+|.+ .+++ .+...+|+.++.++++| +||+||+.|.+|++.++.+++++|++
T Consensus 621 ~~~~d~~~~~~~~~~~~~~~~~~~~g~p-~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~ 699 (751)
T 2xe4_A 621 VPFVDVMTTMCDPSIPLTTGEWEEWGNP-NEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRE 699 (751)
T ss_dssp SCCCCHHHHHTCTTSTTHHHHTTTTCCT-TSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHH
T ss_pred CCcchHHhhhcccCcccchhhHHHcCCC-CCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHh
Confidence 9999875431 00111 112555 3332 34577999999999987 99999999999999999999999999
Q ss_pred cC---CCeeEEEcCCCCCCCCCCC-cHHHHHHHHHHHHHHhC
Q 008274 534 AR---KPYEILIFPDERHMPRRHR-DRIYMEERIWEFIERTL 571 (571)
Q Consensus 534 ~~---~~~~~~~~~~~~H~~~~~~-~~~~~~~~i~~fl~~~l 571 (571)
.+ ..+.+.+++++||++.... +.......+++||.++|
T Consensus 700 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l 741 (751)
T 2xe4_A 700 CKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHL 741 (751)
T ss_dssp HCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHh
Confidence 85 4556777799999985433 45566778999999875
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=402.70 Aligned_cols=506 Identities=14% Similarity=0.118 Sum_probs=361.3
Q ss_pred CceEEECCCCCeEEEEEEeCCCC--CeEEEeecCCCCC--------------CCCCcccccCCCCCCC--------CceE
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEI--PRFRIMHQGKSSV--------------GSEAQEDHAYPFAGAS--------NVKV 80 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~--~~~~~~~~~~~~~--------------~~~~~~~~~y~~~g~~--------~~~~ 80 (571)
...+.|||||++|||+....+.. ..+.+...++... +.++...+.|...-.. +...
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 45788999999999987765432 2222221121110 1112222222111000 1234
Q ss_pred EEEEEECCCCce--EEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 81 RLGVVSAAGGPV--SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
+|+++++.+++. +.+... .+.......+.|||||+.|++.+.+.....+||++|..+++.++|+......+.
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 276 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHER------TGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYE 276 (695)
T ss_dssp EEEEEETTSCGGGCEEEECC------CCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEE
T ss_pred EEEEEECCCCchhceEEEec------CCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEE
Confidence 689999998763 233221 122346778999999998888776553456899999988888888765433221
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecC-CccEEEEEeCCCce---eeceeec--CeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKT-GFRHLYLHDINGTC---LGPITEG--DWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~-g~~~l~~~~~~~~~---~~~lT~~--~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
+. +.++++++.++++ +...|+++++++++ .+.|+.+ ...+.++. ++ ++.|+++...++.
T Consensus 277 -------~~-----~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~-~~--~~~lv~~~~~dg~ 341 (695)
T 2bkl_A 277 -------VH-----AWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVS-IV--GGHLSLEYLKDAT 341 (695)
T ss_dssp -------EE-----EETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEE-EE--TTEEEEEEEETTE
T ss_pred -------EE-----ecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEE-EE--CCEEEEEEEECCE
Confidence 11 1122377777764 46899999987765 3566654 34455443 55 5678888877763
Q ss_pred ceeEEEEEEeCCCCCCCCCCCeEecCC-Cce-EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhh
Q 008274 233 LESHLYCAKLYPDWNHTLEAPVKLTNG-KGK-HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPR 310 (571)
Q Consensus 233 ~~~~l~~~~l~~~g~~~~~~~~~lt~~-~g~-~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~ 310 (571)
.+|+.+++ +|. ..+.++.. .+. ..++++++++.+++++++.++|+.+|++++.+++ .+.+......
T Consensus 342 --~~l~~~~~--~g~----~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~-~~~l~~~~~~--- 409 (695)
T 2bkl_A 342 --SEVRVATL--KGK----PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK-SELWAKVDVP--- 409 (695)
T ss_dssp --EEEEEEET--TCC----EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC-EEEEEECCCS---
T ss_pred --EEEEEEeC--CCC----eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc-EEEEecCCCC---
Confidence 88999887 453 34455533 333 2346789999999999999999999999997766 4455443221
Q ss_pred hccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEEC
Q 008274 311 IKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLD 390 (571)
Q Consensus 311 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d 390 (571)
+... ...++.+.+++.||..++++++.|++.. ..++.|+||++|||++... . ..|......|+++||+|+++|
T Consensus 410 ~~~~-~~~~~~~~~~~~dg~~i~~~~~~p~~~~-~~~~~p~vl~~hGg~~~~~-~----~~~~~~~~~l~~~G~~v~~~d 482 (695)
T 2bkl_A 410 MNPE-QYQVEQVFYASKDGTKVPMFVVHRKDLK-RDGNAPTLLYGYGGFNVNM-E----ANFRSSILPWLDAGGVYAVAN 482 (695)
T ss_dssp SCGG-GEEEEEEEEECTTSCEEEEEEEEETTCC-CSSCCCEEEECCCCTTCCC-C----CCCCGGGHHHHHTTCEEEEEC
T ss_pred CCHH-HCeEEEEEEECCCCCEEEEEEEECCCCC-CCCCccEEEEECCCCcccc-C----CCcCHHHHHHHhCCCEEEEEe
Confidence 2222 2367889999999999999999998742 2367899999999887654 1 123344567889999999999
Q ss_pred CCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 391 NRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 391 ~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
+||+|++|..|........+...++|+.+++++|++++.+|++|++|+|+|+||++++.++.++|++|+++|+.+|+.++
T Consensus 483 ~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~ 562 (695)
T 2bkl_A 483 LRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDM 562 (695)
T ss_dssp CTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCT
T ss_pred cCCCCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccch
Confidence 99999999988776655555566899999999999998899999999999999999999999999999999999999987
Q ss_pred ccccc-----hhhhhhcCCCCCC--hhhhccCCcchhhccCC--CcEEEEecCCCCCCChHHHHHHHHHHHH---cCCCe
Q 008274 471 DGYDT-----FYTEKYMGLPSED--PVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRHTARLINALVA---ARKPY 538 (571)
Q Consensus 471 ~~~~~-----~~~~~~~g~~~~~--~~~~~~~s~~~~~~~~~--~p~lli~G~~D~~v~~~~~~~~~~~l~~---~~~~~ 538 (571)
..+.. .+...+ |.|... .+.+...+|+.++.+++ +|+||+||++|.+|++.++.+++++|++ .+.++
T Consensus 563 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 641 (695)
T 2bkl_A 563 VRYHLFGSGRTWIPEY-GTAEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATA 641 (695)
T ss_dssp TTGGGSTTGGGGHHHH-CCTTSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCE
T ss_pred hhccccCCCcchHHHh-CCCCCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCE
Confidence 65432 122223 554321 13456778988888876 6999999999999999999999999998 67899
Q ss_pred eEEEcCCCCCCCCCC-CcHHHHHHHHHHHHHHhC
Q 008274 539 EILIFPDERHMPRRH-RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 539 ~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~~~l 571 (571)
++++++++||++... .+.......+++||.++|
T Consensus 642 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 675 (695)
T 2bkl_A 642 LLRIEANAGHGGADQVAKAIESSVDLYSFLFQVL 675 (695)
T ss_dssp EEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 999999999998542 456778889999999875
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=403.93 Aligned_cols=504 Identities=16% Similarity=0.138 Sum_probs=353.5
Q ss_pred CceEEECCCCCeEEEEEEeCCCC--CeEEEeecC-------------CCCCCCCCcccccCCCCCCC---------CceE
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEI--PRFRIMHQG-------------KSSVGSEAQEDHAYPFAGAS---------NVKV 80 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~--~~~~~~~~~-------------~~~~~~~~~~~~~y~~~g~~---------~~~~ 80 (571)
...+.|||||++|||.+.+.+.. ..+.+...+ ....+.++ ..+.|...-.. +-..
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~ 243 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQ 243 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCC
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCC
Confidence 45689999999999987654331 111111101 01113344 44544321111 1134
Q ss_pred EEEEEECCCCce--EEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC-ccEEEEEEECCCC--c-eEEEEEeec
Q 008274 81 RLGVVSAAGGPV--SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ-TKLKVLKFDIKTG--Q-RKVILVEEL 154 (571)
Q Consensus 81 ~l~~~dl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~-~~~~i~~~d~~~g--~-~~~l~~~~~ 154 (571)
+|+++++.+++. +.+... .+.......+.|||||+.|++...+.. ....||++|++++ + .+.|+....
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFAT------PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp EEEEEETTSCGGGCEEEECC------TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred EEEEEECCCCchhCEEEecc------CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 689999988763 222111 112235778999999998888876542 3558999999988 6 677765432
Q ss_pred CCeeeccCCcccCCCCCccCCCeEEEEEecCC-ccEEEEEeCCC--ceeeceeecCe-EEEEEEEEeecCcEEEEEEcCC
Q 008274 155 DSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG-FRHLYLHDING--TCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 155 ~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g-~~~l~~~~~~~--~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~ 230 (571)
.... +. ..+++.+++.+++++ ..+|+++++++ ++.+.|+.+.. .+.++ .+ .++.|+++...+
T Consensus 318 ~~~~-------~~----~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~-~~--~~~~lv~~~~~d 383 (741)
T 1yr2_A 318 AQWD-------FV----DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESV-GI--AGNRLFASYIHD 383 (741)
T ss_dssp SCEE-------EE----EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEE-EE--EBTEEEEEEEET
T ss_pred ceEE-------EE----eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEE-EE--ECCEEEEEEEEC
Confidence 2111 11 113445888887754 68899999887 45677765432 23333 24 467888888877
Q ss_pred CCceeEEEEEEeCCCCCCCCCCCeEecCC-Cce-EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCCh
Q 008274 231 GPLESHLYCAKLYPDWNHTLEAPVKLTNG-KGK-HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTV 308 (571)
Q Consensus 231 ~~~~~~l~~~~l~~~g~~~~~~~~~lt~~-~g~-~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~ 308 (571)
+. .+|+.+++ +|. ..+.++.. .+. ..++++++++.++|++++.++|+.+|++++.+++ .+.+... ..
T Consensus 384 g~--~~l~~~~~--~g~----~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~-~~~l~~~-~~- 452 (741)
T 1yr2_A 384 AK--SQVLAFDL--DGK----PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK-TTPWEPV-HL- 452 (741)
T ss_dssp TE--EEEEEEET--TSC----EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE-EEECSCC-CC-
T ss_pred CE--EEEEEEeC--CCC----ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc-EEEEecC-CC-
Confidence 63 88999987 453 45556542 333 4457889999999999999999999999997665 4555442 11
Q ss_pred hhhccCCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEE
Q 008274 309 PRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWK 388 (571)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 388 (571)
.+... ...++.+.+++.||..++++++.|++. .++.|+||++|||++... ...+......|+++||+|++
T Consensus 453 -~~~~~-~~~~~~~~~~~~dg~~i~~~~~~p~~~---~~~~p~vl~~hGg~~~~~-----~~~~~~~~~~l~~~G~~v~~ 522 (741)
T 1yr2_A 453 -TFDPA-DFRVEQVFYPSKDGTKVPMFIVRRKDA---KGPLPTLLYGYGGFNVAL-----TPWFSAGFMTWIDSGGAFAL 522 (741)
T ss_dssp -SSCGG-GEEEEEEEEECTTSCEEEEEEEEETTC---CSCCCEEEECCCCTTCCC-----CCCCCHHHHHHHTTTCEEEE
T ss_pred -CCChh-HCEEEEEEEEcCCCCEEEEEEEecCCC---CCCCcEEEEECCCCCccC-----CCCcCHHHHHHHHCCcEEEE
Confidence 22222 236788999999999999999999863 257899999999987643 12334456788899999999
Q ss_pred ECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 389 LDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 389 ~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
+|+||+|++|..|........+...++|+.+++++|++++.+|++|++|+|+|+||++++.++.++|++|+++|+.+|+.
T Consensus 523 ~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~ 602 (741)
T 1yr2_A 523 ANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVM 602 (741)
T ss_dssp ECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCC
T ss_pred EecCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCcc
Confidence 99999999999887765555555568999999999999988999999999999999999999999999999999999999
Q ss_pred Ccccccch-----hhhhhcCCCCC--ChhhhccCCcchhhcc-CCC-cEEEEecCCCCCCChHHHHHHHHHHHH---cCC
Q 008274 469 SWDGYDTF-----YTEKYMGLPSE--DPVGYEYSSVMHHVHK-MKG-KLLLVHGMIDENVHFRHTARLINALVA---ARK 536 (571)
Q Consensus 469 ~~~~~~~~-----~~~~~~g~~~~--~~~~~~~~s~~~~~~~-~~~-p~lli~G~~D~~v~~~~~~~~~~~l~~---~~~ 536 (571)
++..+... +...+ +.|.. ..+.+...+|+.++.. ++. |+||+||++|.+|++.++.+++++|+. .+.
T Consensus 603 d~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~ 681 (741)
T 1yr2_A 603 DMLRFDQFTAGRYWVDDY-GYPEKEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPK 681 (741)
T ss_dssp CTTSGGGSTTGGGGHHHH-CCTTSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSS
T ss_pred ccccccCCCCCchhHHHc-CCCCCHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCC
Confidence 87654321 22222 55532 1234567899998887 884 999999999999999999999999999 889
Q ss_pred CeeEEEcCCCCCCCCCC-CcHHHHHHHHHHHHHHhC
Q 008274 537 PYEILIFPDERHMPRRH-RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 537 ~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~~~l 571 (571)
++++++++++||++... .......+.+++||.++|
T Consensus 682 ~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 717 (741)
T 1yr2_A 682 PHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHFT 717 (741)
T ss_dssp CEEEEEC---------CHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 99999999999998543 345678899999998864
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=339.74 Aligned_cols=426 Identities=14% Similarity=0.113 Sum_probs=307.0
Q ss_pred eEEEEEccCCeE----EEEEEeccCccEEEEEEECCC--CceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEec
Q 008274 111 LARVNWMHGNIL----TAQVLNRSQTKLKVLKFDIKT--GQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK 184 (571)
Q Consensus 111 ~~~~~wspDg~~----i~~~~~r~~~~~~i~~~d~~~--g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~ 184 (571)
...+.-++|++. ++.....+-..+.+|..|.+. ++.++|....+...+ ....+.+++....
T Consensus 242 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~ 308 (711)
T 4hvt_A 242 YVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDATLQ-------------GSFKEYVFWLLRS 308 (711)
T ss_dssp EEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTCEEE-------------EEETTEEEEECSS
T ss_pred EEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcceEe-------------eeECCEEEEEECc
Confidence 334566788773 333333233457899998774 554455221111100 0123345553321
Q ss_pred C--------CccEEEEEeCCCc--------eeec-eeec-CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCC
Q 008274 185 T--------GFRHLYLHDINGT--------CLGP-ITEG-DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDW 246 (571)
Q Consensus 185 ~--------g~~~l~~~~~~~~--------~~~~-lT~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g 246 (571)
+ ....|+.+++++. +.+. ++.. +..+.++. |. ++.|+++...++. .+|+.+++. +|
T Consensus 309 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~--~~~l~~~~~~~~~--~~l~~~~~~-~g 382 (711)
T 4hvt_A 309 DWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFIS-TT--KDRVFLATYDNVV--AKVVTFTLE-NE 382 (711)
T ss_dssp CEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEE-EC--SSCEEEEEEETTE--EEEEEECEE-TT
T ss_pred ccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEE-EE--CCEEEEEEEECCE--EEEEEEECC-CC
Confidence 1 2356888887653 2333 5543 33444443 55 4568888887764 778888772 22
Q ss_pred CCCCCCCeE-ecCC-Cc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhccCCCCCCeEEE
Q 008274 247 NHTLEAPVK-LTNG-KG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKRLQLEPPDIVQ 323 (571)
Q Consensus 247 ~~~~~~~~~-lt~~-~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 323 (571)
.- ..+. +... .+ ....+.+++++.+++.+++..+|+.+|.+++. ++ .+.+.... ..+....+ .++.+.
T Consensus 383 ~~---~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~-~~~l~~~~---~~~~~~~~-~~e~v~ 453 (711)
T 4hvt_A 383 QW---TKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HE-LKIIRKAL---YSFDSENY-VLEQKE 453 (711)
T ss_dssp EE---CCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SC-EEEEECCS---SCCCGGGE-EEEEEE
T ss_pred ce---EEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-Cc-EEEEecCC---cccCcccC-eeEEEE
Confidence 10 1223 3322 23 33346778888999999999999999999985 43 45555432 23444444 678999
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhh-HHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 324 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRA-QYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 324 ~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
+++.||.+|+++++.|++.+ ..+++|+||++|||++.... .. +.... +.|+++||+|+.+|+||++++|..|.
T Consensus 454 ~~s~DG~~i~~~l~~P~~~~-~~~~~P~vl~~HGG~~~~~~-~~----~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~ 527 (711)
T 4hvt_A 454 ATSFDGVKIPYFLVYKKGIK-FDGKNPTLLEAYGGFQVINA-PY----FSRIKNEVWVKNAGVSVLANIRGGGEFGPEWH 527 (711)
T ss_dssp EECTTSCEEEEEEEEETTCC-CSSCCCEEEECCCCTTCCCC-CC----CCHHHHHHTGGGTCEEEEECCTTSSTTCHHHH
T ss_pred EECCCCeEEEEEEEecCCCC-CCCCccEEEEECCCCCCCCC-Cc----ccHHHHHHHHHCCCEEEEEeCCCCCCcchhHH
Confidence 99999999999999998752 33688999999999887542 22 22223 58899999999999999999999998
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc-----hh
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT-----FY 477 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----~~ 477 (571)
......++...++|+.+++++|++++.+|++||+|+|+|+||+++++++.++|++|+|+|+.+|+.++..+.. .|
T Consensus 528 ~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~ 607 (711)
T 4hvt_A 528 KSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSW 607 (711)
T ss_dssp HTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGG
T ss_pred HhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHH
Confidence 8887777777889999999999999999999999999999999999999999999999999999999865532 22
Q ss_pred hhhhcCCCCC--ChhhhccCCcchhhccCCC--cEEEEecCCCCCCChHHHHHHHHHH-HHcCCCeeEEEcCCCCCCCCC
Q 008274 478 TEKYMGLPSE--DPVGYEYSSVMHHVHKMKG--KLLLVHGMIDENVHFRHTARLINAL-VAARKPYEILIFPDERHMPRR 552 (571)
Q Consensus 478 ~~~~~g~~~~--~~~~~~~~s~~~~~~~~~~--p~lli~G~~D~~v~~~~~~~~~~~l-~~~~~~~~~~~~~~~~H~~~~ 552 (571)
...+ |.|.. ..+.+...||+.++.++++ |+||+||++|.+||+.++.+++++| ++.+++++++++|++||++..
T Consensus 608 ~~~~-G~p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~ 686 (711)
T 4hvt_A 608 VTEY-GDPEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGS 686 (711)
T ss_dssp HHHH-CCTTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCS
T ss_pred HHHh-CCCcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcC
Confidence 2223 66543 2245678899999999986 9999999999999999999999999 999999999999999999854
Q ss_pred C-CcHHHHHHHHHHHHHHhC
Q 008274 553 H-RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 553 ~-~~~~~~~~~i~~fl~~~l 571 (571)
. .........+++||.++|
T Consensus 687 ~~~~~~~~~~~i~~FL~~~L 706 (711)
T 4hvt_A 687 DLKESANYFINLYTFFANAL 706 (711)
T ss_dssp SHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHh
Confidence 3 345667788899999874
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.7e-26 Score=212.41 Aligned_cols=223 Identities=15% Similarity=0.137 Sum_probs=172.2
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+.+.++. +|..+.++++.|.+. .++.|+||++||..+... .+..+++.|+++||.|+++|+||++++
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~~p~~~---~~~~p~vv~~HG~~g~~~-------~~~~~~~~l~~~G~~v~~~d~~g~g~~ 73 (241)
T 3f67_A 5 IAGETSIPS-QGENMPAYHARPKNA---DGPLPIVIVVQEIFGVHE-------HIRDLCRRLAQEGYLAIAPELYFRQGD 73 (241)
T ss_dssp EEEEEEEEE-TTEEEEEEEEEETTC---CSCEEEEEEECCTTCSCH-------HHHHHHHHHHHTTCEEEEECTTTTTCC
T ss_pred eeeeEEEec-CCcceEEEEecCCCC---CCCCCEEEEEcCcCccCH-------HHHHHHHHHHHCCcEEEEecccccCCC
Confidence 456788888 888999999999763 256899999999665432 345568889999999999999998766
Q ss_pred hhhhHHHHh-------ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 398 GLKFEASIK-------HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 398 ~~~~~~~~~-------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
...+..... ........+|+.++++++.+++ +|.++++|+|||+||.+++.++.++|+ ++++++..+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~- 150 (241)
T 3f67_A 74 PNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLV- 150 (241)
T ss_dssp GGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCS-
T ss_pred CCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEecccc-
Confidence 543221110 0000123678999999998887 788999999999999999999999888 556665444321
Q ss_pred ccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 471 DGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 471 ~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
.....+...+|...+.++++|+|+++|++|..++++++..+.+.+.+.+.+++++++|+++|++
T Consensus 151 ----------------~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 214 (241)
T 3f67_A 151 ----------------GEKSLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAF 214 (241)
T ss_dssp ----------------CCCCSSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTT
T ss_pred ----------------CCCccCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcce
Confidence 1123344566777888999999999999999999999999999999999999999999999998
Q ss_pred CC-------CCcHHHHHHHHHHHHHHh
Q 008274 551 RR-------HRDRIYMEERIWEFIERT 570 (571)
Q Consensus 551 ~~-------~~~~~~~~~~i~~fl~~~ 570 (571)
.. .......++.+++||++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 215 NADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp TCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 42 234577889999999864
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=211.05 Aligned_cols=211 Identities=15% Similarity=0.185 Sum_probs=141.8
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhh
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK 400 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~ 400 (571)
.+++. .||.+|++++|.|.+. ++.|+||++||+++... ...+...++.|+++||+|+++|+||+|.++..
T Consensus 33 ~~~~~-~dG~~i~g~l~~P~~~----~~~p~Vl~~HG~g~~~~-----~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~ 102 (259)
T 4ao6_A 33 GFSLE-VDGRTVPGVYWSPAEG----SSDRLVLLGHGGTTHKK-----VEYIEQVAKLLVGRGISAMAIDGPGHGERASV 102 (259)
T ss_dssp EEEEE-ETTEEEEEEEEEESSS----CCSEEEEEEC-------------CHHHHHHHHHHHTTEEEEEECCCC-------
T ss_pred EEEEe-eCCeEEEEEEEeCCCC----CCCCEEEEeCCCccccc-----chHHHHHHHHHHHCCCeEEeeccCCCCCCCCc
Confidence 34444 5999999999999764 56799999999887643 22355678999999999999999999876543
Q ss_pred hHHHHhccCCC---------------CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcC
Q 008274 401 FEASIKHNCGR---------------IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGA 465 (571)
Q Consensus 401 ~~~~~~~~~~~---------------~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~ 465 (571)
........... ..+.|..++++++... +|.++|+++|+|+||++++.+++..|.. ++++...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~pri-~Aav~~~ 179 (259)
T 4ao6_A 103 QAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKRI-KVALLGL 179 (259)
T ss_dssp ------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCTTE-EEEEEES
T ss_pred ccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCCce-EEEEEec
Confidence 22111111000 0134566677777554 4789999999999999999999988765 5555433
Q ss_pred ccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCC
Q 008274 466 PVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD 545 (571)
Q Consensus 466 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 545 (571)
+.... ....++...+.++++|+|++||++|.+||++++.++++++. ..+.+++++|+
T Consensus 180 ~~~~~---------------------~~~~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~--~~~k~l~~~~G 236 (259)
T 4ao6_A 180 MGVEG---------------------VNGEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLG--TKQKTLHVNPG 236 (259)
T ss_dssp CCTTS---------------------TTHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCC--CSSEEEEEESS
T ss_pred ccccc---------------------ccccchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEeCC
Confidence 22110 11123456678899999999999999999999999999883 34667889998
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 546 ERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 546 ~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+|... ...+..+.+++||++||
T Consensus 237 -~H~~~---p~~e~~~~~~~fl~~hL 258 (259)
T 4ao6_A 237 -KHSAV---PTWEMFAGTVDYLDQRL 258 (259)
T ss_dssp -CTTCC---CHHHHTHHHHHHHHHHC
T ss_pred -CCCCc---CHHHHHHHHHHHHHHhc
Confidence 55421 24567788999999997
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-24 Score=207.80 Aligned_cols=229 Identities=15% Similarity=0.051 Sum_probs=169.2
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh--
Q 008274 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL-- 399 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~-- 399 (571)
..+...+|..+.+++..|... ...++.|+||++|||+..... ...+..++..|+++||.|+++|+||++.+..
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~-~~~~~~p~vv~~HGgg~~~~~----~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~ 91 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQ-NENYTFPAIIICPGGGYQHIS----QRESDPLALAFLAQGYQVLLLNYTVMNKGTNYN 91 (276)
T ss_dssp EECCCBTTBEEEEECCCC-------CCBCEEEEECCSTTTSCC----GGGSHHHHHHHHHTTCEEEEEECCCTTSCCCSC
T ss_pred ccccCCCCeEEEEEEeCCccc-ccCCCCCEEEEEcCCccccCC----chhhHHHHHHHHHCCCEEEEecCccCCCcCCCC
Confidence 445566888888876665432 122578999999997644221 1234556888999999999999999876431
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcC---CCcCCcEEEEeechHHHHHHHHHhc-CCCeeEEEEEcCccCCcccccc
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLAR-FPDVFQCAVSGAPVTSWDGYDT 475 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~~v~~~~~~~~~~~~~ 475 (571)
.+. ....|+.++++++.+.. .+|.++|+|+|||+||.+++.++.+ .+.+++++++.+|+.++.....
T Consensus 92 ~~~---------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~ 162 (276)
T 3hxk_A 92 FLS---------QNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWP 162 (276)
T ss_dssp THH---------HHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCS
T ss_pred cCc---------hHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCC
Confidence 111 12678899999998863 3788999999999999999999998 7889999999999876432210
Q ss_pred hh--hhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCC
Q 008274 476 FY--TEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH 553 (571)
Q Consensus 476 ~~--~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 553 (571)
.. ...++ +. +. ...++...+.++++|+|++||++|..+|++++..+++++++.+.+++++++|+++|++...
T Consensus 163 ~~~~~~~~~--~~---~~-~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 236 (276)
T 3hxk_A 163 SDLSHFNFE--IE---NI-SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLA 236 (276)
T ss_dssp SSSSSSCCC--CS---CC-GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTC
T ss_pred cchhhhhcC--ch---hh-hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCcccc
Confidence 00 01111 11 11 4456667778888999999999999999999999999999999999999999999988432
Q ss_pred ------------CcHHHHHHHHHHHHHHh
Q 008274 554 ------------RDRIYMEERIWEFIERT 570 (571)
Q Consensus 554 ------------~~~~~~~~~i~~fl~~~ 570 (571)
.....+.+.+.+||+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~~ 265 (276)
T 3hxk_A 237 NRTTAPSDAYCLPSVHRWVSWASDWLERQ 265 (276)
T ss_dssp STTSCSSSTTCCHHHHTHHHHHHHHHHHH
T ss_pred CccccccccccCchHHHHHHHHHHHHHhC
Confidence 24577889999999875
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-24 Score=205.27 Aligned_cols=227 Identities=20% Similarity=0.235 Sum_probs=162.7
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhh
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK 400 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~ 400 (571)
.+++.. +|.+++++++.|++. .++.|+||++||.+++.. ...|..+++.|+++||.|+++|+||+|.+...
T Consensus 3 ~~~~~~-~g~~l~~~~~~p~~~---~~~~p~vvl~HG~~~~~~-----~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~ 73 (251)
T 2wtm_A 3 AMYIDC-DGIKLNAYLDMPKNN---PEKCPLCIIIHGFTGHSE-----ERHIVAVQETLNEIGVATLRADMYGHGKSDGK 73 (251)
T ss_dssp EEEEEE-TTEEEEEEEECCTTC---CSSEEEEEEECCTTCCTT-----SHHHHHHHHHHHHTTCEEEEECCTTSTTSSSC
T ss_pred ceEEec-CCcEEEEEEEccCCC---CCCCCEEEEEcCCCcccc-----cccHHHHHHHHHHCCCEEEEecCCCCCCCCCc
Confidence 355654 788999999998752 146799999999776521 11345568889999999999999999977543
Q ss_pred hHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhh
Q 008274 401 FEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEK 480 (571)
Q Consensus 401 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 480 (571)
........ ..+|+.++++++.+...+ ++++++||||||.+++.++.++|++++++|+.+|....... ....
T Consensus 74 ~~~~~~~~----~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---~~~~ 144 (251)
T 2wtm_A 74 FEDHTLFK----WLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEI---ARTG 144 (251)
T ss_dssp GGGCCHHH----HHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHH---HHHT
T ss_pred cccCCHHH----HHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHH---Hhhh
Confidence 21111111 156788888888665433 48999999999999999999999999999999887542110 0000
Q ss_pred -hcC---CCCCCh----------------hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeE
Q 008274 481 -YMG---LPSEDP----------------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI 540 (571)
Q Consensus 481 -~~g---~~~~~~----------------~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 540 (571)
..+ .+...+ ......++...+.++++|+|++||++|..+|++.+..+.+.+ .+.++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~----~~~~~ 220 (251)
T 2wtm_A 145 ELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQY----KNCKL 220 (251)
T ss_dssp EETTEECBTTBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHS----SSEEE
T ss_pred hhccccCCchhcchHHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhC----CCcEE
Confidence 000 000000 001122344556788999999999999999999988887765 47899
Q ss_pred EEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 541 LIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 541 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+++|+++|.+ .++...+.+.+.+||++++
T Consensus 221 ~~~~~~gH~~--~~~~~~~~~~i~~fl~~~~ 249 (251)
T 2wtm_A 221 VTIPGDTHCY--DHHLELVTEAVKEFMLEQI 249 (251)
T ss_dssp EEETTCCTTC--TTTHHHHHHHHHHHHHHHH
T ss_pred EEECCCCccc--chhHHHHHHHHHHHHHHhc
Confidence 9999999998 6778889999999998763
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-25 Score=221.32 Aligned_cols=229 Identities=15% Similarity=0.113 Sum_probs=175.0
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
...+.+.++. +|..++++++.|.+. ++.|+||++||+++... . +...++.|+++||.|+++|+||+|.
T Consensus 125 ~~~~~v~~~~-dg~~i~~~l~~p~~~----~~~P~vl~~hG~~~~~~---~----~~~~~~~l~~~G~~v~~~d~rG~G~ 192 (386)
T 2jbw_A 125 PPAERHELVV-DGIPMPVYVRIPEGP----GPHPAVIMLGGLESTKE---E----SFQMENLVLDRGMATATFDGPGQGE 192 (386)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSSS----CCEEEEEEECCSSCCTT---T----THHHHHHHHHTTCEEEEECCTTSGG
T ss_pred CCeEEEEEEe-CCEEEEEEEEcCCCC----CCCCEEEEeCCCCccHH---H----HHHHHHHHHhCCCEEEEECCCCCCC
Confidence 5778899988 899999999999863 57899999999765532 1 2223788899999999999999876
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 476 (571)
+.. ..........++.++++++.+++.+|.++++|+|+|+||++++.++.+ |++|+++|+. |+.++......
T Consensus 193 s~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~ 264 (386)
T 2jbw_A 193 MFE------YKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDL 264 (386)
T ss_dssp GTT------TCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGG
T ss_pred CCC------CCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHh
Confidence 511 011111123468889999999888899999999999999999999998 8899999999 98876443221
Q ss_pred hh-------hhhcCCC--CCCh-hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHH-HHcCCCeeEEEcCC
Q 008274 477 YT-------EKYMGLP--SEDP-VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINAL-VAARKPYEILIFPD 545 (571)
Q Consensus 477 ~~-------~~~~g~~--~~~~-~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l-~~~~~~~~~~~~~~ 545 (571)
+. ....+.. .... ..+...++...+.++++|+|+++|++|. +++.++.++++++ .. +++++++++
T Consensus 265 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~---~~~~~~~~~ 340 (386)
T 2jbw_A 265 ETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE---HLNLVVEKD 340 (386)
T ss_dssp SCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGG---GEEEEEETT
T ss_pred ccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCC---CcEEEEeCC
Confidence 11 1122321 1111 3345667777889999999999999999 9999999999887 43 689999999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 546 ERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 546 ~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++|.+ ..+...+.+.+.+||+++|
T Consensus 341 ~gH~~--~~~~~~~~~~i~~fl~~~l 364 (386)
T 2jbw_A 341 GDHCC--HNLGIRPRLEMADWLYDVL 364 (386)
T ss_dssp CCGGG--GGGTTHHHHHHHHHHHHHH
T ss_pred CCcCC--ccchHHHHHHHHHHHHHhc
Confidence 99975 4567788999999999874
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-24 Score=217.36 Aligned_cols=219 Identities=19% Similarity=0.202 Sum_probs=163.0
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCC
Q 008274 331 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCG 410 (571)
Q Consensus 331 ~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~ 410 (571)
.+.++++.|++. ++.|+||++||+++.. +...++.|+++||.|+++|+||++++... ..
T Consensus 144 ~l~~~l~~P~~~----~~~P~Vv~~hG~~~~~---------~~~~a~~La~~Gy~V~a~D~rG~g~~~~~--------~~ 202 (422)
T 3k2i_A 144 RVRATLFLPPGP----GPFPGIIDIFGIGGGL---------LEYRASLLAGHGFATLALAYYNFEDLPNN--------MD 202 (422)
T ss_dssp TEEEEEEECSSS----CCBCEEEEECCTTCSC---------CCHHHHHHHTTTCEEEEEECSSSTTSCSS--------CS
T ss_pred cEEEEEEcCCCC----CCcCEEEEEcCCCcch---------hHHHHHHHHhCCCEEEEEccCCCCCCCCC--------cc
Confidence 589999999763 5789999999986642 22347889999999999999998765432 22
Q ss_pred CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhh-----------
Q 008274 411 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTE----------- 479 (571)
Q Consensus 411 ~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------- 479 (571)
....+|+.++++++.++..+|.++|+|+||||||.+++.++.++|+ ++++|+.+|..........+..
T Consensus 203 ~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (422)
T 3k2i_A 203 NISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLR 281 (422)
T ss_dssp CEETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGG
T ss_pred cCCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchh
Confidence 2347899999999999888889999999999999999999999998 8898888876532110000000
Q ss_pred hhc----C-----CCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHH-HHHHHHHHHcCCC-eeEEEcCCCCC
Q 008274 480 KYM----G-----LPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHT-ARLINALVAARKP-YEILIFPDERH 548 (571)
Q Consensus 480 ~~~----g-----~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~-~~~~~~l~~~~~~-~~~~~~~~~~H 548 (571)
... + ....+.......+....+.++++|+|++||++|.+++.... ..+.++|++.+++ +++++||++||
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH 361 (422)
T 3k2i_A 282 RIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH 361 (422)
T ss_dssp GCEECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCS
T ss_pred hcccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 000 0 00001111112233334678899999999999999998865 6888999999988 99999999999
Q ss_pred CCCCC---------------------------CcHHHHHHHHHHHHHHhC
Q 008274 549 MPRRH---------------------------RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 549 ~~~~~---------------------------~~~~~~~~~i~~fl~~~l 571 (571)
.+..+ ...++.++.+++||+++|
T Consensus 362 ~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L 411 (422)
T 3k2i_A 362 YIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHL 411 (422)
T ss_dssp CCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhc
Confidence 97322 457789999999999986
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-25 Score=214.96 Aligned_cols=226 Identities=18% Similarity=0.193 Sum_probs=170.9
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.+.+.++. +|..+.++++.|. +.|+||++||++++.. .+..++..|+++||.|+++|+||+|.+.
T Consensus 6 ~~~~~~~~-~g~~l~~~~~~p~-------~~p~vv~~HG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~G~g~s~ 70 (290)
T 3ksr_A 6 LSSIEIPV-GQDELSGTLLTPT-------GMPGVLFVHGWGGSQH-------HSLVRAREAVGLGCICMTFDLRGHEGYA 70 (290)
T ss_dssp EEEEEEEE-TTEEEEEEEEEEE-------SEEEEEEECCTTCCTT-------TTHHHHHHHHTTTCEEECCCCTTSGGGG
T ss_pred eeeEEecC-CCeEEEEEEecCC-------CCcEEEEeCCCCCCcC-------cHHHHHHHHHHCCCEEEEeecCCCCCCC
Confidence 45677777 7889999999986 4699999999876533 3455688999999999999999998776
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc----cc
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG----YD 474 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~----~~ 474 (571)
.......... ..+|+.++++++.+++.+|.++++|+|||+||.+++.++.++| ++++++.+|...... ..
T Consensus 71 ~~~~~~~~~~----~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~ 144 (290)
T 3ksr_A 71 SMRQSVTRAQ----NLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPK 144 (290)
T ss_dssp GGTTTCBHHH----HHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBH
T ss_pred CCcccccHHH----HHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhccc
Confidence 5322111111 2689999999999888788899999999999999999999888 567777777654321 11
Q ss_pred chhh-----hhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 475 TFYT-----EKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 475 ~~~~-----~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
.... ..+... ...+...++...+.++++|+|++||+.|..++++.+..+.+.+...+ +++++++++++|.
T Consensus 145 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~ 219 (290)
T 3ksr_A 145 VSLNADPDLMDYRRR----ALAPGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNAR-SLTSRVIAGADHA 219 (290)
T ss_dssp HHHHHSTTHHHHTTS----CCCGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSS-EEEEEEETTCCTT
T ss_pred ccccCChhhhhhhhh----hhhhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCC-CceEEEcCCCCCC
Confidence 0100 111111 11222334455678889999999999999999999999999886654 7899999999998
Q ss_pred CCCCCcHHHHHHHHHHHHHHh
Q 008274 550 PRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 550 ~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+........+.+.+.+||+++
T Consensus 220 ~~~~~~~~~~~~~i~~fl~~~ 240 (290)
T 3ksr_A 220 LSVKEHQQEYTRALIDWLTEM 240 (290)
T ss_dssp CCSHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHH
Confidence 866557788999999999876
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.92 E-value=7e-24 Score=200.28 Aligned_cols=208 Identities=16% Similarity=0.190 Sum_probs=163.9
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhh
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK 400 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~ 400 (571)
.+.++..+| .+.++++.|.+ ++.|+||++||.++...... ...+..+++.|+++||.|+++|+||+|.+...
T Consensus 25 ~~~~~~~~g-~l~~~~~~p~~-----~~~p~vv~~HG~~~~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~ 96 (249)
T 2i3d_A 25 EVIFNGPAG-RLEGRYQPSKE-----KSAPIAIILHPHPQFGGTMN--NQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGE 96 (249)
T ss_dssp EEEEEETTE-EEEEEEECCSS-----TTCCEEEEECCCGGGTCCTT--SHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC
T ss_pred EEEEECCCc-eEEEEEEcCCC-----CCCCEEEEECCCcccCCCcc--chHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
Confidence 899999888 89999998864 45699999999643322111 11235568889999999999999998876543
Q ss_pred hHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhh
Q 008274 401 FEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEK 480 (571)
Q Consensus 401 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 480 (571)
+.. .....+|+.++++++..+.. +.++++++|||+||.+++.++.++|+ ++++++.+|..+...
T Consensus 97 ~~~------~~~~~~d~~~~i~~l~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-------- 160 (249)
T 2i3d_A 97 FDH------GAGELSDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD-------- 160 (249)
T ss_dssp CCS------SHHHHHHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC--------
T ss_pred CCC------ccchHHHHHHHHHHHHHhCC-CCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh--------
Confidence 211 11125789999999988753 77799999999999999999999998 899999988764210
Q ss_pred hcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHH-cCCCeeEEEcCCCCCCCCCCCcHHHH
Q 008274 481 YMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA-ARKPYEILIFPDERHMPRRHRDRIYM 559 (571)
Q Consensus 481 ~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H~~~~~~~~~~~ 559 (571)
...+.++++|+|+++|++|..++++.+..+++.+.+ .+.+++++++|+++|.+. .....+
T Consensus 161 -----------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~--~~~~~~ 221 (249)
T 2i3d_A 161 -----------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN--GKVDEL 221 (249)
T ss_dssp -----------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT--TCHHHH
T ss_pred -----------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc--cCHHHH
Confidence 123456789999999999999999999999998865 445899999999999984 578889
Q ss_pred HHHHHHHHHHhC
Q 008274 560 EERIWEFIERTL 571 (571)
Q Consensus 560 ~~~i~~fl~~~l 571 (571)
.+.+.+||++++
T Consensus 222 ~~~i~~fl~~~l 233 (249)
T 2i3d_A 222 MGECEDYLDRRL 233 (249)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999998763
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=202.89 Aligned_cols=211 Identities=17% Similarity=0.158 Sum_probs=161.9
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
+.+.++..+|..+.++++.|.+ ++.|+||++||..+... .+..+++.|+++||.|+++|+||+|.++.
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~-----~~~p~vv~~hG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 71 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK-----APAPVIVIAQDIFGVNA-------FMRETVSWLVDQGYAAVCPDLYARQAPGT 71 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS-----CSEEEEEEECCTTBSCH-------HHHHHHHHHHHTTCEEEEECGGGGTSTTC
T ss_pred ceEEEecCCCCeEEEEEECCCC-----CCCCEEEEEcCCCCCCH-------HHHHHHHHHHhCCcEEEeccccccCCCcc
Confidence 4466788899999999999874 57899999999766532 34556888999999999999999887643
Q ss_pred hhHH-------H----HhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 400 KFEA-------S----IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 400 ~~~~-------~----~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
.... . ..........+|+.++++++.++..++ ++++++|||+||.+++.++.++| ++++++.+|..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~ 148 (236)
T 1zi8_A 72 ALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVG 148 (236)
T ss_dssp BCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSS
T ss_pred cccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcc
Confidence 1100 0 000001112578889999998776544 69999999999999999999988 78888877642
Q ss_pred CcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCC
Q 008274 469 SWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548 (571)
Q Consensus 469 ~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 548 (571)
.. ++...+.++++|+|+++|++|..++++.+..+++.+.+.+ +++++++++++|
T Consensus 149 ~~-------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H 202 (236)
T 1zi8_A 149 LE-------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANP-LLQVHWYEEAGH 202 (236)
T ss_dssp GG-------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCT-TEEEEEETTCCT
T ss_pred cc-------------------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC-CceEEEECCCCc
Confidence 10 1234567788999999999999999999999999987655 899999999999
Q ss_pred CCCCCC-------cHHHHHHHHHHHHHHhC
Q 008274 549 MPRRHR-------DRIYMEERIWEFIERTL 571 (571)
Q Consensus 549 ~~~~~~-------~~~~~~~~i~~fl~~~l 571 (571)
.+.... ..+.+.+.+.+||+++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l 232 (236)
T 1zi8_A 203 SFARTGSSGYVASAAALANERTLDFLVPLQ 232 (236)
T ss_dssp TTTCTTSTTCCHHHHHHHHHHHHHHHGGGC
T ss_pred ccccCCCCccCHHHHHHHHHHHHHHHHHhc
Confidence 875432 24678899999999875
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-24 Score=204.05 Aligned_cols=230 Identities=12% Similarity=0.077 Sum_probs=164.7
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCC--CCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 320 DIVQIQANDGTVLYGALYKPDESR--YGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~--~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
+.+.+. .+|..+.+.+|.|+... ...++.|+||++|||+...... ..+...+..|+++||.|+++|+||+|..
T Consensus 5 ~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~----~~~~~~~~~l~~~G~~v~~~d~~g~g~~ 79 (277)
T 3bxp_A 5 EQRTLN-TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSG----REEAPIATRMMAAGMHTVVLNYQLIVGD 79 (277)
T ss_dssp EEEEEC-STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCC----TTHHHHHHHHHHTTCEEEEEECCCSTTT
T ss_pred EEEEec-cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCC----ccchHHHHHHHHCCCEEEEEecccCCCC
Confidence 455663 46778889999997310 1225789999999975433211 2345567889999999999999997633
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcC---CCcCCcEEEEeechHHHHHHHHHhcC--------------CCeeEE
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLARF--------------PDVFQC 460 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~--------------~~~~~~ 460 (571)
+..+ .....|+.++++++.+.. .+|.++++|+|||+||.+++.++.++ +.++++
T Consensus 80 ~~~~---------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~ 150 (277)
T 3bxp_A 80 QSVY---------PWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAA 150 (277)
T ss_dssp CCCT---------THHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSE
T ss_pred CccC---------chHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCE
Confidence 2211 112678888888887752 36788999999999999999999875 778999
Q ss_pred EEEcCccCCcccccc--hhhh-hhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCC
Q 008274 461 AVSGAPVTSWDGYDT--FYTE-KYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 537 (571)
Q Consensus 461 ~v~~~~~~~~~~~~~--~~~~-~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~ 537 (571)
+++.+|+.++..... .... .+++ .+...++...+.++.+|+|++||++|..+|++++..++++|.+.+.+
T Consensus 151 ~v~~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~ 223 (277)
T 3bxp_A 151 IILGYPVIDLTAGFPTTSAARNQITT-------DARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVA 223 (277)
T ss_dssp EEEESCCCBTTSSSSSSHHHHHHHCS-------CGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCC
T ss_pred EEEeCCcccCCCCCCCccccchhccc-------hhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCe
Confidence 999999876432100 0001 2221 23345666677777889999999999999999999999999999999
Q ss_pred eeEEEcCCCCCCCCCCC--------------cHHHHHHHHHHHHHHh
Q 008274 538 YEILIFPDERHMPRRHR--------------DRIYMEERIWEFIERT 570 (571)
Q Consensus 538 ~~~~~~~~~~H~~~~~~--------------~~~~~~~~i~~fl~~~ 570 (571)
++++++++++|.+.... ....+.+.+.+||+++
T Consensus 224 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 270 (277)
T 3bxp_A 224 TAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQ 270 (277)
T ss_dssp EEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhc
Confidence 99999999999764322 2577899999999875
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=219.71 Aligned_cols=219 Identities=19% Similarity=0.218 Sum_probs=160.2
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCC
Q 008274 331 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCG 410 (571)
Q Consensus 331 ~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~ 410 (571)
.+.+++|.|++. ++.|+||++||+.+... ...++.|+++||.|+++|+||++++.... .
T Consensus 160 ~l~~~l~~P~~~----~~~P~Vv~lhG~~~~~~---------~~~a~~La~~Gy~Vla~D~rG~~~~~~~~--------~ 218 (446)
T 3hlk_A 160 RVRGTLFLPPEP----GPFPGIVDMFGTGGGLL---------EYRASLLAGKGFAVMALAYYNYEDLPKTM--------E 218 (446)
T ss_dssp TEEEEEEECSSS----CCBCEEEEECCSSCSCC---------CHHHHHHHTTTCEEEEECCSSSTTSCSCC--------S
T ss_pred eEEEEEEeCCCC----CCCCEEEEECCCCcchh---------hHHHHHHHhCCCEEEEeccCCCCCCCcch--------h
Confidence 589999999753 57899999999866421 22478999999999999999987654321 1
Q ss_pred CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhh----------
Q 008274 411 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEK---------- 480 (571)
Q Consensus 411 ~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---------- 480 (571)
....+|+.++++++.++..+|.++++|+||||||.+++.++.++|+ ++++|+.+|..........+...
T Consensus 219 ~~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (446)
T 3hlk_A 219 TLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRN 297 (446)
T ss_dssp EEEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGG
T ss_pred hCCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchh
Confidence 1347899999999999888889999999999999999999999988 78888888765321100000000
Q ss_pred -hc---------CCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHH-HHHHHHHHHHcCCC-eeEEEcCCCCC
Q 008274 481 -YM---------GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRH-TARLINALVAARKP-YEILIFPDERH 548 (571)
Q Consensus 481 -~~---------g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~-~~~~~~~l~~~~~~-~~~~~~~~~~H 548 (571)
.. ..................+.++++|+|+++|++|.+++... +..+.++|++.+.+ +++++||+++|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH 377 (446)
T 3hlk_A 298 RIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGH 377 (446)
T ss_dssp GCEECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCS
T ss_pred ccccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCC
Confidence 00 00000000011111222367788999999999999999954 47899999999988 99999999999
Q ss_pred CCC---------------------------CCCcHHHHHHHHHHHHHHhC
Q 008274 549 MPR---------------------------RHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 549 ~~~---------------------------~~~~~~~~~~~i~~fl~~~l 571 (571)
.+. .....++.++++++||+++|
T Consensus 378 ~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L 427 (446)
T 3hlk_A 378 YIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHL 427 (446)
T ss_dssp CCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhh
Confidence 983 11236778999999999986
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-24 Score=205.74 Aligned_cols=205 Identities=17% Similarity=0.174 Sum_probs=147.1
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.+.||++||.+++.. .|..+++.|+++||.|+++|+||+|.+..+.......++ .+|+.++++++.+.
T Consensus 51 ~~~VlllHG~~~s~~-------~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~----~~d~~~~~~~l~~~- 118 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQ-------SMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDW----TADIVAAMRWLEER- 118 (281)
T ss_dssp SEEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHH----HHHHHHHHHHHHHH-
T ss_pred CceEEEECCCCCCHH-------HHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHH----HHHHHHHHHHHHhC-
Confidence 356888999766532 356678999999999999999999988654332222222 57888888888764
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchh---hh----hhcCCCCC-----ChhhhccCC
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY---TE----KYMGLPSE-----DPVGYEYSS 496 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~----~~~g~~~~-----~~~~~~~~s 496 (571)
.++++|+||||||.+++.++.++|++++++|+.+|...+....... .. ...+.... ..+......
T Consensus 119 ---~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (281)
T 4fbl_A 119 ---CDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVT 195 (281)
T ss_dssp ---CSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEE
T ss_pred ---CCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccC
Confidence 3689999999999999999999999999999998876543211100 00 00000000 000000011
Q ss_pred c--------------chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHH
Q 008274 497 V--------------MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEER 562 (571)
Q Consensus 497 ~--------------~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 562 (571)
+ ...+.++++|+|+++|++|.+++++.+..+++++. +.+++++++|++||.+....+.+.+.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~--~~~~~l~~~~~~gH~~~~e~~~e~v~~~ 273 (281)
T 4fbl_A 196 PVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIG--STEKELLWLENSYHVATLDNDKELILER 273 (281)
T ss_dssp EGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCC--CSSEEEEEESSCCSCGGGSTTHHHHHHH
T ss_pred chHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCC--CCCcEEEEECCCCCcCccccCHHHHHHH
Confidence 1 12357789999999999999999999999988763 3578999999999987555567889999
Q ss_pred HHHHHHHh
Q 008274 563 IWEFIERT 570 (571)
Q Consensus 563 i~~fl~~~ 570 (571)
+.+||++|
T Consensus 274 i~~FL~~H 281 (281)
T 4fbl_A 274 SLAFIRKH 281 (281)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhC
Confidence 99999986
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.3e-24 Score=195.81 Aligned_cols=212 Identities=17% Similarity=0.177 Sum_probs=162.1
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+.+.++. +|.++.++++.|.+ +.|+||++||+++... .| .+...++.|+++||.|+++|+||.|.+
T Consensus 11 ~~~~~~~~~-~g~~l~~~~~~p~~------~~p~vv~~hG~~~~~~---~~--~~~~~~~~l~~~G~~v~~~d~~g~g~s 78 (223)
T 2o2g_A 11 QEYAVSVSV-GEVKLKGNLVIPNG------ATGIVLFAHGSGSSRY---SP--RNRYVAEVLQQAGLATLLIDLLTQEEE 78 (223)
T ss_dssp CEEEEEEEE-TTEEEEEEEECCTT------CCEEEEEECCTTCCTT---CH--HHHHHHHHHHHHTCEEEEECSSCHHHH
T ss_pred eeeEEEEec-CCeEEEEEEecCCC------CceEEEEecCCCCCCC---cc--chHHHHHHHHHCCCEEEEEcCCCcCCC
Confidence 457788887 88899999999864 4699999999776532 11 223467888999999999999987655
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchh
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 477 (571)
.................+|+.++++++..++.+|.++++++|||+||.+++.++.++|++++++++.+|..++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------ 152 (223)
T 2o2g_A 79 EIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA------ 152 (223)
T ss_dssp HHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC------
T ss_pred CccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC------
Confidence 43221100000001125788899999998877889999999999999999999999999999999998864321
Q ss_pred hhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHH
Q 008274 478 TEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRI 557 (571)
Q Consensus 478 ~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~ 557 (571)
...+.++++|+|+++|++|..++... .+.+.+.+.+++++++++++|.+...+...
T Consensus 153 --------------------~~~~~~~~~P~l~i~g~~D~~~~~~~----~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~ 208 (223)
T 2o2g_A 153 --------------------PSALPHVKAPTLLIVGGYDLPVIAMN----EDALEQLQTSKRLVIIPRASHLFEEPGALT 208 (223)
T ss_dssp --------------------TTTGGGCCSCEEEEEETTCHHHHHHH----HHHHHHCCSSEEEEEETTCCTTCCSTTHHH
T ss_pred --------------------HHHHhcCCCCEEEEEccccCCCCHHH----HHHHHhhCCCeEEEEeCCCCcccCChHHHH
Confidence 12356678999999999999886433 344555578899999999999986666778
Q ss_pred HHHHHHHHHHHHhC
Q 008274 558 YMEERIWEFIERTL 571 (571)
Q Consensus 558 ~~~~~i~~fl~~~l 571 (571)
.+.+.+.+||+++|
T Consensus 209 ~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 209 AVAQLASEWFMHYL 222 (223)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 89999999999876
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-23 Score=209.40 Aligned_cols=236 Identities=15% Similarity=0.123 Sum_probs=165.9
Q ss_pred CCCeEEEEEcCCCcEEEEEEEc-CCCC-------------------CCCCCCceEEEEEcCCCCceeecccccccchhhh
Q 008274 317 EPPDIVQIQANDGTVLYGALYK-PDES-------------------RYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRA 376 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~-P~~~-------------------~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~ 376 (571)
...+.+.+...+| +.+.+|. |... ....++.|+||++|||+....... ...+..++
T Consensus 62 v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~--~~~~~~~~ 137 (365)
T 3ebl_A 62 VSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSAS--STIYDSLC 137 (365)
T ss_dssp EEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTT--BHHHHHHH
T ss_pred CceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCc--hhhHHHHH
Confidence 4567788888888 7777887 8642 012357899999999876432111 11234556
Q ss_pred HHHHhC-CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC----CCcCC-cEEEEeechHHHHHHHH
Q 008274 377 QYLRSK-GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG----LAKVG-HIGLYGWSYGGYLSAIT 450 (571)
Q Consensus 377 ~~l~~~-G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-~i~l~G~S~GG~~a~~~ 450 (571)
+.|+++ ||+|+++|||+.++.... ..++|+.++++|+.++. .+|++ ||+|+|+|+||++|+.+
T Consensus 138 ~~la~~~g~~Vv~~dyR~~p~~~~~-----------~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~ 206 (365)
T 3ebl_A 138 RRFVKLSKGVVVSVNYRRAPEHRYP-----------CAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHV 206 (365)
T ss_dssp HHHHHHHTSEEEEECCCCTTTSCTT-----------HHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHCCCEEEEeeCCCCCCCCCc-----------HHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHH
Confidence 778775 999999999987543311 12689999999999764 57898 99999999999999999
Q ss_pred HhcCCC---eeEEEEEcCccCCcccccch-----------------hhhhhcCCCCCChhhhccCCcch-hhccCC----
Q 008274 451 LARFPD---VFQCAVSGAPVTSWDGYDTF-----------------YTEKYMGLPSEDPVGYEYSSVMH-HVHKMK---- 505 (571)
Q Consensus 451 ~~~~~~---~~~~~v~~~~~~~~~~~~~~-----------------~~~~~~g~~~~~~~~~~~~s~~~-~~~~~~---- 505 (571)
+.+.++ .++++|+.+|+.+....... +...+++... .......+|+. ....++
T Consensus 207 a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~l~~~~~ 284 (365)
T 3ebl_A 207 AVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDA--DRDHPACNPFGPNGRRLGGLPF 284 (365)
T ss_dssp HHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTC--CTTSTTTCTTSTTCCCCTTSCC
T ss_pred HHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCC--CCCCcccCCCCCcchhhccCCC
Confidence 987554 78999999998875422111 1111221111 11111223332 233444
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC---CCCcHHHHHHHHHHHHHHhC
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR---RHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~---~~~~~~~~~~~i~~fl~~~l 571 (571)
+|+||+||+.|..+ ..+..++++|++.|+++++++||+++|++. ..+....+++.+.+||++++
T Consensus 285 pP~Li~~G~~D~l~--~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~ 351 (365)
T 3ebl_A 285 AKSLIIVSGLDLTC--DRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANL 351 (365)
T ss_dssp CCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEcCcccch--hHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhh
Confidence 58999999999655 466899999999999999999999999974 34567789999999999875
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=211.93 Aligned_cols=224 Identities=14% Similarity=0.098 Sum_probs=170.3
Q ss_pred CCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecc-cc-----cccchhhhHHHHhCCcEEEEE
Q 008274 317 EPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCD-SW-----INTVDMRAQYLRSKGILVWKL 389 (571)
Q Consensus 317 ~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~-~~-----~~~~~~~~~~l~~~G~~v~~~ 389 (571)
...+.+.+... +|..+.+++|.|.+.. ..+++|+||++||+++...... .+ ...+ ....+....|+.|+++
T Consensus 142 ~~~~~~~~~~~~dg~~l~~~v~~P~~~~-~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~vv~p 219 (380)
T 3doh_A 142 DDFLAFTFKDPETGVEIPYRLFVPKDVN-PDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVW-AQPRYQVVHPCFVLAP 219 (380)
T ss_dssp GGEEEEEEECTTTCCEEEEEEECCSSCC-TTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGG-GSHHHHTTSCCEEEEE
T ss_pred ccccceeeccCCCCcEEEEEEEcCCCCC-CCCCccEEEEECCCCCCCCchhhhhhccccceee-cCccccccCCEEEEEe
Confidence 34577888888 8999999999998742 3368899999999875422000 00 0001 0123445788999999
Q ss_pred CCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC
Q 008274 390 DNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS 469 (571)
Q Consensus 390 d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~ 469 (571)
|+||.++.+..|........+.....|+.++++++.++..+|++|++|+|||+||++++.+++++|++|+++++.+|..+
T Consensus 220 d~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~ 299 (380)
T 3doh_A 220 QCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGD 299 (380)
T ss_dssp CCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred cCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCC
Confidence 99998877765543222222344577889999999988778999999999999999999999999999999999988741
Q ss_pred cccccchhhhhhcCCCCCChhhhccCCcchhhccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCC--
Q 008274 470 WDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE-- 546 (571)
Q Consensus 470 ~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 546 (571)
...+.+++ +|+|++||+.|..+|++++..++++|++.+.++++++||++
T Consensus 300 ----------------------------~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h 351 (380)
T 3doh_A 300 ----------------------------VSKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFM 351 (380)
T ss_dssp ----------------------------GGGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHH
T ss_pred ----------------------------hhhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcc
Confidence 12234455 89999999999999999999999999999999999999999
Q ss_pred -CCCCCCCCcHHHHHH--HHHHHHHHh
Q 008274 547 -RHMPRRHRDRIYMEE--RIWEFIERT 570 (571)
Q Consensus 547 -~H~~~~~~~~~~~~~--~i~~fl~~~ 570 (571)
+|++.........+. .+++||.++
T Consensus 352 ~~h~~~~H~~~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 352 EKHGWDPHGSWIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp HHTTCCTTCTHHHHHTCHHHHHHHHTC
T ss_pred cCCCCCCchhHHHhcCCHHHHHHHHhh
Confidence 555543344555556 899999875
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-24 Score=206.96 Aligned_cols=238 Identities=16% Similarity=0.052 Sum_probs=171.4
Q ss_pred CCCCCeEEEEEcCCCcEEEEEEEcCCCCC--CCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCC
Q 008274 315 QLEPPDIVQIQANDGTVLYGALYKPDESR--YGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR 392 (571)
Q Consensus 315 ~~~~~~~~~~~~~dg~~l~~~~~~P~~~~--~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r 392 (571)
...+.+.+.+...+|..+...+| |+... .+.++.|+||++|||+...... ..+..++..|+++||.|+++|+|
T Consensus 15 ~~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~----~~~~~~~~~l~~~G~~v~~~d~~ 89 (283)
T 3bjr_A 15 LYFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPV----AQAESLAMAFAGHGYQAFYLEYT 89 (283)
T ss_dssp --CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCH----HHHHHHHHHHHTTTCEEEEEECC
T ss_pred cCCCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCc----cccHHHHHHHHhCCcEEEEEecc
Confidence 34567888999888888888888 65410 0236789999999976422211 12455688899999999999999
Q ss_pred CCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC---CCcCCcEEEEeechHHHHHHHHHhcCCCe------------
Q 008274 393 GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLARFPDV------------ 457 (571)
Q Consensus 393 G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~~~~------------ 457 (571)
|++.++..+. ....|+.++++++.+.. .+|.++++|+|||+||.+++.++.++|++
T Consensus 90 g~~~~~~~~~---------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~ 160 (283)
T 3bjr_A 90 LLTDQQPLGL---------APVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAML 160 (283)
T ss_dssp CTTTCSSCBT---------HHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHH
T ss_pred CCCccccCch---------hHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCC
Confidence 9876521111 12567888888888753 46778999999999999999999999987
Q ss_pred -eEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCC
Q 008274 458 -FQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARK 536 (571)
Q Consensus 458 -~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~ 536 (571)
++++++.+|+.+.... +.... .........+...++...+.++++|+|+++|++|..+|++++..+++++.+.+.
T Consensus 161 ~~~~~v~~~p~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~ 236 (283)
T 3bjr_A 161 KPNNVVLGYPVISPLLG---FPKDD-ATLATWTPTPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKI 236 (283)
T ss_dssp CCSSEEEESCCCCTTSB---C---------CCCCCGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTC
T ss_pred CccEEEEcCCccccccc---ccccc-chHHHHHHHhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCC
Confidence 8899999888764211 00000 000001112344566666778889999999999999999999999999999999
Q ss_pred CeeEEEcCCCCCCCCCCC------------cHHHHHHHHHHHHHHh
Q 008274 537 PYEILIFPDERHMPRRHR------------DRIYMEERIWEFIERT 570 (571)
Q Consensus 537 ~~~~~~~~~~~H~~~~~~------------~~~~~~~~i~~fl~~~ 570 (571)
+++++++++++|.+.... ....+.+.+.+||+++
T Consensus 237 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 237 PYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp CEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred CeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 999999999999763211 2357888999999875
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.7e-24 Score=225.01 Aligned_cols=245 Identities=16% Similarity=0.234 Sum_probs=176.9
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccccc-ccch-hhh---HHHHhCCcEEEEECCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWI-NTVD-MRA---QYLRSKGILVWKLDNR 392 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~-~~~~-~~~---~~l~~~G~~v~~~d~r 392 (571)
..+.+.++..||..|.++++.|.+. +++|+||++||...... ...+. ..+. .++ +.|+++||+|+.+|+|
T Consensus 24 ~~~~v~i~~~DG~~L~~~~~~P~~~----~~~P~vl~~hgyg~~~~-~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~R 98 (615)
T 1mpx_A 24 IKREVMIPMRDGVKLHTVIVLPKGA----KNAPIVLTRTPYDASGR-TERLASPHMKDLLSAGDDVFVEGGYIRVFQDVR 98 (615)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTC----CSEEEEEEEESSCHHHH-TCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECT
T ss_pred EEEEEEEECCCCCEEEEEEEeCCCC----CCeeEEEEEcCCCCccc-cccccccccccccchhHHHHHhCCeEEEEECCC
Confidence 3467889999999999999999763 57899999998544310 00010 0110 112 8899999999999999
Q ss_pred CCCCChhhhHHHH-----hccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCc
Q 008274 393 GTARRGLKFEASI-----KHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAP 466 (571)
Q Consensus 393 G~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~ 466 (571)
|+|+++..+.... +..++..+.+|+.++++++.++ ++.| .||+++|+||||+++++++..+|+.++|+|+.+|
T Consensus 99 G~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~ 177 (615)
T 1mpx_A 99 GKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVPESP 177 (615)
T ss_dssp TSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESC
T ss_pred CCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEecCC
Confidence 9998876654321 1111225689999999999998 7766 5999999999999999999988999999999999
Q ss_pred cCC-cc-c-c------c-c---hhhh--------------------h------------------------hcCCCCCCh
Q 008274 467 VTS-WD-G-Y------D-T---FYTE--------------------K------------------------YMGLPSEDP 489 (571)
Q Consensus 467 ~~~-~~-~-~------~-~---~~~~--------------------~------------------------~~g~~~~~~ 489 (571)
+.+ +. . + . . ++.. . ++..+ ...
T Consensus 178 ~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~d 256 (615)
T 1mpx_A 178 MIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHA-AYD 256 (615)
T ss_dssp CCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTC-SSC
T ss_pred ccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCC-CcC
Confidence 988 43 1 1 0 0 0000 0 00001 112
Q ss_pred hhhccCCcchhhcc--CCCcEEEEecCCCCCCChHHHHHHHHHHHHcCC---CeeEEEcCCCCCCCCC------------
Q 008274 490 VGYEYSSVMHHVHK--MKGKLLLVHGMIDENVHFRHTARLINALVAARK---PYEILIFPDERHMPRR------------ 552 (571)
Q Consensus 490 ~~~~~~s~~~~~~~--~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~---~~~~~~~~~~~H~~~~------------ 552 (571)
+.|.+.||..++++ |++|+|++||..|.+ +..++.+++++|++++. ..++++.|. +|+...
T Consensus 257 ~~w~~~Sp~~~~~~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~~~~~~~~f~ 334 (615)
T 1mpx_A 257 AFWQEQALDKVMARTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSALGALNFE 334 (615)
T ss_dssp HHHHTTCHHHHHHTSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEETTEECS
T ss_pred hhhhhcChhhhhhccCCCCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccccccCccccC
Confidence 34556799999999 999999999999998 88899999999998864 488999888 697511
Q ss_pred CCc-HHHHHHHHHHHHHHhC
Q 008274 553 HRD-RIYMEERIWEFIERTL 571 (571)
Q Consensus 553 ~~~-~~~~~~~i~~fl~~~l 571 (571)
.+. .....+.+++||++||
T Consensus 335 ~~~~~~~~~~~~~~wfd~~L 354 (615)
T 1mpx_A 335 GDTARQFRHDVLRPFFDQYL 354 (615)
T ss_dssp SCHHHHHHHHTHHHHHHHHH
T ss_pred cccchhhhhhHHHHHHHHHh
Confidence 111 2223678899999985
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-24 Score=211.54 Aligned_cols=237 Identities=15% Similarity=0.121 Sum_probs=169.9
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
....+.+.+++.+|.++.++++.|.+. .++.|+||++||+++... .+ .....++++||.|+++|+||+|
T Consensus 65 ~~~~~~~~~~~~dg~~i~~~~~~P~~~---~~~~p~vv~~HG~g~~~~---~~-----~~~~~l~~~G~~v~~~d~rG~g 133 (337)
T 1vlq_A 65 TVEAYDVTFSGYRGQRIKGWLLVPKLE---EEKLPCVVQYIGYNGGRG---FP-----HDWLFWPSMGYICFVMDTRGQG 133 (337)
T ss_dssp SEEEEEEEEECGGGCEEEEEEEEECCS---CSSEEEEEECCCTTCCCC---CG-----GGGCHHHHTTCEEEEECCTTCC
T ss_pred CeEEEEEEEEcCCCCEEEEEEEecCCC---CCCccEEEEEcCCCCCCC---Cc-----hhhcchhhCCCEEEEecCCCCC
Confidence 345788899988999999999999762 257899999999876532 11 1345778899999999999998
Q ss_pred CChhhhHHHH--------------hccCCC-------CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC
Q 008274 396 RRGLKFEASI--------------KHNCGR-------IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF 454 (571)
Q Consensus 396 ~~~~~~~~~~--------------~~~~~~-------~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~ 454 (571)
.++....... ...+.. ..+.|+.++++++.+++.+|.++++|+|||+||.+++.++..+
T Consensus 134 ~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~ 213 (337)
T 1vlq_A 134 SGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALS 213 (337)
T ss_dssp CSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHC
T ss_pred CcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcC
Confidence 6542100000 000000 1367999999999998888999999999999999999999998
Q ss_pred CCeeEEEEEcCccCC-ccccc-----chhh--hhhc-CCCCCChh---hhccCCcchhhccCCCcEEEEecCCCCCCChH
Q 008274 455 PDVFQCAVSGAPVTS-WDGYD-----TFYT--EKYM-GLPSEDPV---GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFR 522 (571)
Q Consensus 455 ~~~~~~~v~~~~~~~-~~~~~-----~~~~--~~~~-g~~~~~~~---~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~ 522 (571)
|. ++++++.+|+.. +.... ..+. ..++ ..+..... .+...++...+.++++|+|+++|+.|.++|+.
T Consensus 214 p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~ 292 (337)
T 1vlq_A 214 KK-AKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPS 292 (337)
T ss_dssp SS-CCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHH
T ss_pred CC-ccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCch
Confidence 84 788888887543 21110 0010 1111 12211111 12345677788899999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 523 HTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 523 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++.++++++ ..+++++++|+++|.+. .....+.+.+||.++|
T Consensus 293 ~~~~~~~~l---~~~~~~~~~~~~gH~~~----~~~~~~~~~~fl~~~l 334 (337)
T 1vlq_A 293 TVFAAYNYY---AGPKEIRIYPYNNHEGG----GSFQAVEQVKFLKKLF 334 (337)
T ss_dssp HHHHHHHHC---CSSEEEEEETTCCTTTT----HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhc---CCCcEEEEcCCCCCCCc----chhhHHHHHHHHHHHH
Confidence 999998877 34689999999999963 2356688888988764
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=205.42 Aligned_cols=229 Identities=15% Similarity=0.163 Sum_probs=164.7
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTAR 396 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~ 396 (571)
..+.+.++..+| .+.+++|.|.+. +.|+||++|||+....... .+...+..|++ .||.|+++|||+.++
T Consensus 62 ~~~~~~~~~~~g-~i~~~~~~p~~~-----~~p~vv~~HGgg~~~g~~~----~~~~~~~~la~~~g~~V~~~dyr~~p~ 131 (326)
T 3ga7_A 62 TTRTCAVPTPYG-DVTTRLYSPQPT-----SQATLYYLHGGGFILGNLD----THDRIMRLLARYTGCTVIGIDYSLSPQ 131 (326)
T ss_dssp EEEEEEECCTTS-CEEEEEEESSSS-----CSCEEEEECCSTTTSCCTT----TTHHHHHHHHHHHCSEEEEECCCCTTT
T ss_pred ceEEEEeecCCC-CeEEEEEeCCCC-----CCcEEEEECCCCcccCChh----hhHHHHHHHHHHcCCEEEEeeCCCCCC
Confidence 347888988888 799999999763 2399999999884332222 23445777777 899999999998765
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcC---CCcCCcEEEEeechHHHHHHHHHhcCCCe------eEEEEEcCcc
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLARFPDV------FQCAVSGAPV 467 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~~~~------~~~~v~~~~~ 467 (571)
.... ..++|+.++++++.++. .+|++||+|+|+|+||++++.++.++++. ++++++.+|+
T Consensus 132 ~~~~-----------~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~ 200 (326)
T 3ga7_A 132 ARYP-----------QAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGL 200 (326)
T ss_dssp SCTT-----------HHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCC
T ss_pred CCCC-----------cHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccc
Confidence 4311 12688999999998863 57899999999999999999999876653 8999999988
Q ss_pred CCcccccc-----------------hhhhhhcCCCCCChhhhccCCcc-hhhccCCCcEEEEecCCCCCCChHHHHHHHH
Q 008274 468 TSWDGYDT-----------------FYTEKYMGLPSEDPVGYEYSSVM-HHVHKMKGKLLLVHGMIDENVHFRHTARLIN 529 (571)
Q Consensus 468 ~~~~~~~~-----------------~~~~~~~g~~~~~~~~~~~~s~~-~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~ 529 (571)
.+...... .+...+++....... ...++. ..+.+..+|+||+||+.|.++ .++..+++
T Consensus 201 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~~ 276 (326)
T 3ga7_A 201 YGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRES--PWYCLFNNDLTRDVPPCFIASAEFDPLI--DDSRLLHQ 276 (326)
T ss_dssp CSCSCCHHHHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGC--TTTSGGGSCCSSCCCCEEEEEETTCTTH--HHHHHHHH
T ss_pred cccCCChhHhhhcCCCCCCCHHHHHHHHHHhCCCCCccCC--cccCCCcchhhcCCCCEEEEecCcCcCH--HHHHHHHH
Confidence 76432110 011112111100000 001111 122334569999999999997 48899999
Q ss_pred HHHHcCCCeeEEEcCCCCCCCCC----CCcHHHHHHHHHHHHHHhC
Q 008274 530 ALVAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l 571 (571)
+|++.|+++++++||+++|++.. .+....+.+.+.+||+++|
T Consensus 277 ~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l 322 (326)
T 3ga7_A 277 TLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARM 322 (326)
T ss_dssp HHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999842 2345788999999999864
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=205.90 Aligned_cols=216 Identities=18% Similarity=0.139 Sum_probs=156.6
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHHHhccC
Q 008274 331 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNC 409 (571)
Q Consensus 331 ~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~~~~ 409 (571)
.+++++|.|.+. ++.|+||++|||++...... .+..++..|+. .||.|+++|||+++....
T Consensus 66 ~i~~~~~~p~~~----~~~p~vv~~HGGg~~~g~~~----~~~~~~~~la~~~g~~vv~~dyr~~p~~~~---------- 127 (322)
T 3fak_A 66 GCAAEWVRAPGC----QAGKAILYLHGGGYVMGSIN----THRSMVGEISRASQAAALLLDYRLAPEHPF---------- 127 (322)
T ss_dssp TEEEEEEECTTC----CTTCEEEEECCSTTTSCCHH----HHHHHHHHHHHHHTSEEEEECCCCTTTSCT----------
T ss_pred CeEEEEEeCCCC----CCccEEEEEcCCccccCChH----HHHHHHHHHHHhcCCEEEEEeCCCCCCCCC----------
Confidence 488999999753 56899999999875432111 22334556665 699999999998764431
Q ss_pred CCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC----eeEEEEEcCccCCcccccchhh-------
Q 008274 410 GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPVTSWDGYDTFYT------- 478 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~------- 478 (571)
...++|+.++++++.++ .+|.+||+|+|+|+||++++.++.+.++ .++++++.+|+.++......+.
T Consensus 128 -~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~ 205 (322)
T 3fak_A 128 -PAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEADP 205 (322)
T ss_dssp -THHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHHTTTTCC
T ss_pred -CcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHHhCccCc
Confidence 11268999999999988 5799999999999999999999987655 3899999999988653322211
Q ss_pred -----------hhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCC
Q 008274 479 -----------EKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDER 547 (571)
Q Consensus 479 -----------~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 547 (571)
..+++... ......+|+.......+|+||+||+.|.+ ..++..++++|++.|+++++++||+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~---~~~~~~sp~~~~~~~~pP~li~~g~~D~~--~~~~~~~~~~l~~~g~~~~~~~~~g~~ 280 (322)
T 3fak_A 206 MVAPGGINKMAARYLNGAD---AKHPYASPNFANLKGLPPLLIHVGRDEVL--LDDSIKLDAKAKADGVKSTLEIWDDMI 280 (322)
T ss_dssp SCCSSHHHHHHHHHHTTSC---TTCTTTCGGGSCCTTCCCEEEEEETTSTT--HHHHHHHHHHHHHTTCCEEEEEETTCC
T ss_pred ccCHHHHHHHHHHhcCCCC---CCCcccCCCcccccCCChHhEEEcCcCcc--HHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 11221110 11122344432222235999999999987 468899999999999999999999999
Q ss_pred CCCCC----CCcHHHHHHHHHHHHHHhC
Q 008274 548 HMPRR----HRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 548 H~~~~----~~~~~~~~~~i~~fl~~~l 571 (571)
|++.. .+....+.+.+.+||+++|
T Consensus 281 H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3fak_A 281 HVWHAFHPMLPEGKQAIVRVGEFMREQW 308 (322)
T ss_dssp TTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred eehhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 98732 3446788999999998864
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-23 Score=222.63 Aligned_cols=245 Identities=16% Similarity=0.199 Sum_probs=177.7
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc-cc---hhhh-HHHHhCCcEEEEECCCC
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN-TV---DMRA-QYLRSKGILVWKLDNRG 393 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~-~~---~~~~-~~l~~~G~~v~~~d~rG 393 (571)
.+.+.++..||..|.++++.|.+. +++|+||++||..........+.. .+ ...+ ++|+++||+|+.+|+||
T Consensus 37 ~~~v~i~~~DG~~L~~~l~~P~~~----~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG 112 (652)
T 2b9v_A 37 KREVMVPMRDGVKLYTVIVIPKNA----RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRG 112 (652)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTC----CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTT
T ss_pred EEEEEEECCCCcEEEEEEEecCCC----CCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCc
Confidence 467899999999999999999763 578999999974332100001110 00 0113 88999999999999999
Q ss_pred CCCChhhhHHHH--hccCC---CCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCcc
Q 008274 394 TARRGLKFEASI--KHNCG---RIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV 467 (571)
Q Consensus 394 ~~~~~~~~~~~~--~~~~~---~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~ 467 (571)
+|+++..+.... ..+++ ..+.+|+.++++|+.++ ++.| .||+++|+||||++++.+++++++.++|+|+.+|+
T Consensus 113 ~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~ 191 (652)
T 2b9v_A 113 KYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPM 191 (652)
T ss_dssp STTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEEC
T ss_pred CCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEecccc
Confidence 999887654331 11122 35679999999999999 8877 59999999999999999999889999999999998
Q ss_pred CCccc---c--c--------chhhh--------------------------------------------hhcCCCCCChh
Q 008274 468 TSWDG---Y--D--------TFYTE--------------------------------------------KYMGLPSEDPV 490 (571)
Q Consensus 468 ~~~~~---~--~--------~~~~~--------------------------------------------~~~g~~~~~~~ 490 (571)
.++.. + . .++.. .++..+. ..+
T Consensus 192 ~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~d~ 270 (652)
T 2b9v_A 192 VDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPA-YDA 270 (652)
T ss_dssp CCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCS-SSH
T ss_pred cccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCC-CCh
Confidence 88532 0 0 00000 0000111 112
Q ss_pred hhccCCcchhhcc--CCCcEEEEecCCCCCCChHHHHHHHHHHHHcC--CCeeEEEcCCCCCCCCC-------------C
Q 008274 491 GYEYSSVMHHVHK--MKGKLLLVHGMIDENVHFRHTARLINALVAAR--KPYEILIFPDERHMPRR-------------H 553 (571)
Q Consensus 491 ~~~~~s~~~~~~~--~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~--~~~~~~~~~~~~H~~~~-------------~ 553 (571)
.|...|+..++++ |++|+|++||..|.+ +..++.+++++|++++ ++.++++.|. +|+... .
T Consensus 271 yw~~~Sp~~~~~~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~~~~~f~~~ 348 (652)
T 2b9v_A 271 FWQGQALDKILAQRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTLGPLEFEGD 348 (652)
T ss_dssp HHHTTCHHHHHHHHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEETTEECSSC
T ss_pred HHhcCChhhhhhcCCCCCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccCCccccccc
Confidence 3456788889999 999999999999997 6678999999999998 8899999887 797511 1
Q ss_pred CcHHHHHHHHHHHHHHhC
Q 008274 554 RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 554 ~~~~~~~~~i~~fl~~~l 571 (571)
.......+.+++||+++|
T Consensus 349 ~~~~~~~~~~~~wfd~~L 366 (652)
T 2b9v_A 349 TAHQYRRDVFRPFFDEYL 366 (652)
T ss_dssp HHHHHHHHTHHHHHHHHH
T ss_pred cchhhhhhHHHHHHHHHh
Confidence 112334688899999885
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.9e-23 Score=197.44 Aligned_cols=231 Identities=18% Similarity=0.166 Sum_probs=166.1
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+.+.+.. +|.++.++++.|.+ ++.|+||++||.++... ...+..++..|+++||.|+++|+||+|.+
T Consensus 21 ~~~~~~~~~-~g~~l~~~~~~p~~-----~~~p~vv~~HG~~~~~~-----~~~~~~~~~~l~~~G~~v~~~d~~G~G~s 89 (270)
T 3pfb_A 21 GMATITLER-DGLQLVGTREEPFG-----EIYDMAIIFHGFTANRN-----TSLLREIANSLRDENIASVRFDFNGHGDS 89 (270)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECSS-----SSEEEEEEECCTTCCTT-----CHHHHHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred cceEEEecc-CCEEEEEEEEcCCC-----CCCCEEEEEcCCCCCcc-----ccHHHHHHHHHHhCCcEEEEEccccccCC
Confidence 445566664 88999999999875 45799999999876521 12355678889999999999999999887
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchh
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 477 (571)
........... ..+|+.++++++.++. +.++++|+|||+||.+++.++.++|++++++++.+|...........
T Consensus 90 ~~~~~~~~~~~----~~~d~~~~i~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~ 163 (270)
T 3pfb_A 90 DGKFENMTVLN----EIEDANAILNYVKTDP--HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEG 163 (270)
T ss_dssp SSCGGGCCHHH----HHHHHHHHHHHHHTCT--TEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHT
T ss_pred CCCCCccCHHH----HHHhHHHHHHHHHhCc--CCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhh
Confidence 64322211111 2578888899888764 34599999999999999999999999999999999876532100000
Q ss_pred -hhhhcCCCCCC---------------hhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEE
Q 008274 478 -TEKYMGLPSED---------------PVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 541 (571)
Q Consensus 478 -~~~~~g~~~~~---------------~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 541 (571)
.......+... ...+...+....+.++++|+|+++|++|..++++.+..+.+.+ .+++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~ 239 (270)
T 3pfb_A 164 NTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIY----QNSTLH 239 (270)
T ss_dssp EETTEECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHC----SSEEEE
T ss_pred hhhccccCcccccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhC----CCCeEE
Confidence 00000000000 0112233445567888999999999999999999888877764 578999
Q ss_pred EcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 542 IFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 542 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++++++|.+. .++...+.+.+.+||+++
T Consensus 240 ~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 240 LIEGADHCFS-DSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp EETTCCTTCC-THHHHHHHHHHHHHHC--
T ss_pred EcCCCCcccC-ccchHHHHHHHHHHHhhc
Confidence 9999999974 567888999999999764
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=186.31 Aligned_cols=204 Identities=21% Similarity=0.249 Sum_probs=154.5
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
...+.+.++..+| .+.++++.|.+. ++.|+||++||++....... ...+..++..|+++||.|+++|+||+|.
T Consensus 4 ~~~~~~~~~~~~g-~l~~~~~~p~~~----~~~~~vv~~HG~~~~~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~ 76 (208)
T 3trd_A 4 MTNEDFLIQGPVG-QLEVMITRPKGI----EKSVTGIICHPHPLHGGTMN--NKVVTTLAKALDELGLKTVRFNFRGVGK 76 (208)
T ss_dssp CSSSCEEEECSSS-EEEEEEECCSSC----CCSEEEEEECSCGGGTCCTT--CHHHHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred cccceEEEECCCc-eEEEEEEcCCCC----CCCCEEEEEcCCCCCCCccC--CchHHHHHHHHHHCCCEEEEEecCCCCC
Confidence 3567899999999 999999998752 46799999999532211111 1123556888999999999999999987
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 476 (571)
+...+ .......+|+.++++++.++. +.++++++|||+||.+++.++ .+| +++++++.+|..+..
T Consensus 77 s~~~~------~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~----- 141 (208)
T 3trd_A 77 SQGRY------DNGVGEVEDLKAVLRWVEHHW--SQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYE----- 141 (208)
T ss_dssp CCSCC------CTTTHHHHHHHHHHHHHHHHC--TTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSG-----
T ss_pred CCCCc------cchHHHHHHHHHHHHHHHHhC--CCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccC-----
Confidence 75432 111223688999999998872 458999999999999999999 667 889999988775210
Q ss_pred hhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcH
Q 008274 477 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR 556 (571)
Q Consensus 477 ~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 556 (571)
....+..+++|+|+++|++|..++++.+.++++++ ..+++++++++++|.+.. ..
T Consensus 142 --------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~~~~--~~ 196 (208)
T 3trd_A 142 --------------------GFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQI---SSPVEFVVMSGASHFFHG--RL 196 (208)
T ss_dssp --------------------GGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHS---SSCCEEEEETTCCSSCTT--CH
T ss_pred --------------------CchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHc---cCceEEEEeCCCCCcccc--cH
Confidence 01223445789999999999999999988888776 444899999999999853 34
Q ss_pred HHHHHHHHHHH
Q 008274 557 IYMEERIWEFI 567 (571)
Q Consensus 557 ~~~~~~i~~fl 567 (571)
..+.+.+.+||
T Consensus 197 ~~~~~~i~~fl 207 (208)
T 3trd_A 197 IELRELLVRNL 207 (208)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 77778888886
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=205.27 Aligned_cols=207 Identities=14% Similarity=0.124 Sum_probs=154.7
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhh
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK 400 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~ 400 (571)
...++-. +..+...+|.|... .++.|+||++|||++....... +..+++.|+++||.|+++|+||++.....
T Consensus 58 ~~~i~y~-~~~~~~~~~~p~~~---~~~~p~vv~~HGgg~~~~~~~~----~~~~~~~l~~~G~~v~~~d~r~~~~~~~~ 129 (303)
T 4e15_A 58 VDHLRYG-EGRQLVDVFYSEKT---TNQAPLFVFVHGGYWQEMDMSM----SCSIVGPLVRRGYRVAVMDYNLCPQVTLE 129 (303)
T ss_dssp EEEEECS-STTCEEEEEECTTC---CTTCCEEEEECCSTTTSCCGGG----SCTTHHHHHHTTCEEEEECCCCTTTSCHH
T ss_pred eeeeccC-CCCcEEEEEecCCC---CCCCCEEEEECCCcCcCCChhH----HHHHHHHHHhCCCEEEEecCCCCCCCChh
Confidence 3344433 44567778888642 2578999999998654332222 34457889999999999999998765421
Q ss_pred hHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCC-------CeeEEEEEcCccCCccc
Q 008274 401 FEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFP-------DVFQCAVSGAPVTSWDG 472 (571)
Q Consensus 401 ~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~-------~~~~~~v~~~~~~~~~~ 472 (571)
. ...|+.++++++.+. ...+.++|+|+|||+||++++.++.+.+ ++++++++.+|+.++..
T Consensus 130 ~-----------~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~ 198 (303)
T 4e15_A 130 Q-----------LMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRE 198 (303)
T ss_dssp H-----------HHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHH
T ss_pred H-----------HHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHh
Confidence 1 167888999998773 2235789999999999999999998654 27999999999988754
Q ss_pred ccc---hhhhhhcCCCCCChhhhccCCcc-hhhccC----CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcC
Q 008274 473 YDT---FYTEKYMGLPSEDPVGYEYSSVM-HHVHKM----KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544 (571)
Q Consensus 473 ~~~---~~~~~~~g~~~~~~~~~~~~s~~-~~~~~~----~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 544 (571)
... .+....++. ..+.+...+|+ ..+..+ ++|+|++||++|..+++.++..++++|++.|.+++++++|
T Consensus 199 ~~~~~~~~~~~~~~~---~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~ 275 (303)
T 4e15_A 199 LSNLESVNPKNILGL---NERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFK 275 (303)
T ss_dssp HHTCTTTSGGGTTCC---CTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred hhcccccchhhhhcC---CHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeC
Confidence 333 233333332 33445566776 456655 8999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 008274 545 DERHM 549 (571)
Q Consensus 545 ~~~H~ 549 (571)
+++|.
T Consensus 276 g~~H~ 280 (303)
T 4e15_A 276 GYDHF 280 (303)
T ss_dssp EEETT
T ss_pred CCCch
Confidence 99995
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.8e-23 Score=200.67 Aligned_cols=233 Identities=18% Similarity=0.147 Sum_probs=164.3
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCc-eeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCV-QLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
..+.+.++..+|..+.++++.|.+. ++.|+||++||+++. .. . +.. ...++++||.|+++|+||+|.
T Consensus 55 ~~~~~~~~~~~g~~i~~~~~~P~~~----~~~p~vv~~HG~~~~~~~---~----~~~-~~~l~~~g~~v~~~d~rg~g~ 122 (318)
T 1l7a_A 55 KVYRLTYKSFGNARITGWYAVPDKE----GPHPAIVKYHGYNASYDG---E----IHE-MVNWALHGYATFGMLVRGQQR 122 (318)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEESSC----SCEEEEEEECCTTCCSGG---G----HHH-HHHHHHTTCEEEEECCTTTSS
T ss_pred EEEEEEEEccCCCEEEEEEEeeCCC----CCccEEEEEcCCCCCCCC---C----ccc-ccchhhCCcEEEEecCCCCCC
Confidence 4567888888899999999999762 578999999998765 32 2 222 347788899999999999987
Q ss_pred ChhhhHHHH-----hccCC---------CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEE
Q 008274 397 RGLKFEASI-----KHNCG---------RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAV 462 (571)
Q Consensus 397 ~~~~~~~~~-----~~~~~---------~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v 462 (571)
+........ ....+ ...+.|+.++++++.++..+|.++|+|+|||+||.+++.++..+|+ +++++
T Consensus 123 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v 201 (318)
T 1l7a_A 123 SEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAV 201 (318)
T ss_dssp SCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEE
T ss_pred CCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEE
Confidence 764321000 00000 0126789999999999887889999999999999999999999887 46666
Q ss_pred EcCccCC-cccccc-----hhh--hhhc---CCCCCCh---hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHH
Q 008274 463 SGAPVTS-WDGYDT-----FYT--EKYM---GLPSEDP---VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLI 528 (571)
Q Consensus 463 ~~~~~~~-~~~~~~-----~~~--~~~~---g~~~~~~---~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~ 528 (571)
+.+|... +..... .+. ..++ +.+.... ......++...+.++++|+|+++|+.|..+++..+..++
T Consensus 202 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~ 281 (318)
T 1l7a_A 202 ADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAY 281 (318)
T ss_dssp EESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHH
T ss_pred ecCCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHH
Confidence 6777543 211100 000 0000 0000000 111223566677888999999999999999999999888
Q ss_pred HHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 529 NALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 529 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+++ ..+++++++++++|.. .....+.+.+||+++|
T Consensus 282 ~~l---~~~~~~~~~~~~~H~~-----~~~~~~~~~~fl~~~l 316 (318)
T 1l7a_A 282 NHL---ETKKELKVYRYFGHEY-----IPAFQTEKLAFFKQIL 316 (318)
T ss_dssp HHC---CSSEEEEEETTCCSSC-----CHHHHHHHHHHHHHHH
T ss_pred hhc---CCCeeEEEccCCCCCC-----cchhHHHHHHHHHHHh
Confidence 876 3458999999999984 2456788999998864
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-23 Score=206.06 Aligned_cols=232 Identities=19% Similarity=0.212 Sum_probs=167.5
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
...+.+.++..+|..++++++.|.+. ++.|+||++||+++... .| ... ..++++||.|+++|+||+|.
T Consensus 80 ~~~~~~~~~~~~g~~l~~~~~~P~~~----~~~p~vv~~HG~g~~~~---~~----~~~-~~~~~~G~~v~~~D~rG~g~ 147 (346)
T 3fcy_A 80 AECYDLYFTGVRGARIHAKYIKPKTE----GKHPALIRFHGYSSNSG---DW----NDK-LNYVAAGFTVVAMDVRGQGG 147 (346)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEESCS----SCEEEEEEECCTTCCSC---CS----GGG-HHHHTTTCEEEEECCTTSSS
T ss_pred eEEEEEEEEcCCCCEEEEEEEecCCC----CCcCEEEEECCCCCCCC---Ch----hhh-hHHHhCCcEEEEEcCCCCCC
Confidence 34577888988999999999999762 57899999999887643 33 222 35678999999999999987
Q ss_pred ChhhhHHHHh------ccCCC----------CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEE
Q 008274 397 RGLKFEASIK------HNCGR----------IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC 460 (571)
Q Consensus 397 ~~~~~~~~~~------~~~~~----------~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~ 460 (571)
+......... ...+. ..+.|+.++++++.....+|.++|+|+|||+||.+++.++..+|+ +++
T Consensus 148 s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~ 226 (346)
T 3fcy_A 148 QSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRK 226 (346)
T ss_dssp SCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCE
T ss_pred CCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccE
Confidence 6543210000 00000 014889999999998888899999999999999999999999998 899
Q ss_pred EEEcCccCCc-ccc------cchh--hhhhcC--CC--CCCh---hhhccCCcchhhccCCCcEEEEecCCCCCCChHHH
Q 008274 461 AVSGAPVTSW-DGY------DTFY--TEKYMG--LP--SEDP---VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHT 524 (571)
Q Consensus 461 ~v~~~~~~~~-~~~------~~~~--~~~~~g--~~--~~~~---~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~ 524 (571)
+++.+|+... ... ...+ ...++. .+ .... ..+...++...+.++++|+|+++|+.|..++++.+
T Consensus 227 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~ 306 (346)
T 3fcy_A 227 VVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTV 306 (346)
T ss_dssp EEEESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHH
T ss_pred EEECCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHH
Confidence 9998886542 100 0000 001110 11 1111 12233456667888999999999999999999988
Q ss_pred HHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 525 ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 525 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.++++++ ..+++++++|+++|.+. ..+.+.+.+||++
T Consensus 307 ~~~~~~~---~~~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~ 343 (346)
T 3fcy_A 307 FAAYNNI---QSKKDIKVYPDYGHEPM-----RGFGDLAMQFMLE 343 (346)
T ss_dssp HHHHTTC---CSSEEEEEETTCCSSCC-----TTHHHHHHHHHHT
T ss_pred HHHHHhc---CCCcEEEEeCCCCCcCH-----HHHHHHHHHHHHH
Confidence 8888766 33789999999999985 4557889999976
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=203.59 Aligned_cols=231 Identities=20% Similarity=0.211 Sum_probs=166.6
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhC-CcEEEEECCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK-GILVWKLDNRGTA 395 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~ 395 (571)
...+.+.++..+| .+.+++|.|.+. .++.|+||++|||+....... .+..++..|+++ ||.|+++|+||++
T Consensus 46 ~~~~~~~i~~~~g-~l~~~~~~P~~~---~~~~p~vv~~HGGg~~~g~~~----~~~~~~~~la~~~g~~v~~~d~rg~~ 117 (310)
T 2hm7_A 46 AEVREFDMDLPGR-TLKVRMYRPEGV---EPPYPALVYYHGGSWVVGDLE----THDPVCRVLAKDGRAVVFSVDYRLAP 117 (310)
T ss_dssp SEEEEEEEEETTE-EEEEEEEECTTC---CSSEEEEEEECCSTTTSCCTT----TTHHHHHHHHHHHTSEEEEECCCCTT
T ss_pred ceEEEEEeccCCC-eEEEEEEecCCC---CCCCCEEEEECCCccccCChh----HhHHHHHHHHHhcCCEEEEeCCCCCC
Confidence 4567788888887 899999999762 257899999999764432222 345567788875 9999999999987
Q ss_pred CChhhhHHHHhccCCCCCchhHHHHHHHHHHcC---CCcCCcEEEEeechHHHHHHHHHhcCCC----eeEEEEEcCccC
Q 008274 396 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPVT 468 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~~~----~~~~~v~~~~~~ 468 (571)
++... ...+|+.++++++.+.. .+|.++++|+|||+||.+++.++.++|+ .++++++.+|+.
T Consensus 118 ~~~~~-----------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~ 186 (310)
T 2hm7_A 118 EHKFP-----------AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPST 186 (310)
T ss_dssp TSCTT-----------HHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCC
T ss_pred CCCCC-----------ccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCc
Confidence 65421 12578999999998864 3678899999999999999999987765 689999999987
Q ss_pred Ccc--cccch-----------------hhhhhcCCCCCChhhhccCCcchh--hccCCCcEEEEecCCCCCCChHHHHHH
Q 008274 469 SWD--GYDTF-----------------YTEKYMGLPSEDPVGYEYSSVMHH--VHKMKGKLLLVHGMIDENVHFRHTARL 527 (571)
Q Consensus 469 ~~~--~~~~~-----------------~~~~~~g~~~~~~~~~~~~s~~~~--~~~~~~p~lli~G~~D~~v~~~~~~~~ 527 (571)
+.. ..... +...+.+.+.. ......+|... +..+ +|+|+++|++|..+ .++..+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~~--~~~~~~ 261 (310)
T 2hm7_A 187 GYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEE--LTHPWFSPVLYPDLSGL-PPAYIATAQYDPLR--DVGKLY 261 (310)
T ss_dssp CCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGG--GGCTTTCGGGCSCCTTC-CCEEEEEEEECTTH--HHHHHH
T ss_pred CCCcccCCcchhhcCCCCCCCHHHHHHHHHHhCCCCCc--cCCccCCCCcCccccCC-CCEEEEEecCCCch--HHHHHH
Confidence 754 11111 11111111100 00011233321 2222 49999999999987 578899
Q ss_pred HHHHHHcCCCeeEEEcCCCCCCCCC----CCcHHHHHHHHHHHHHHhC
Q 008274 528 INALVAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 528 ~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l 571 (571)
+++|++.+.+++++++++++|++.. .+....+.+.+.+||+++|
T Consensus 262 ~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 262 AEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp HHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998742 2445788999999998864
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=200.02 Aligned_cols=233 Identities=16% Similarity=0.085 Sum_probs=166.2
Q ss_pred CCeEEEEEcCCCc-EEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCC
Q 008274 318 PPDIVQIQANDGT-VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTA 395 (571)
Q Consensus 318 ~~~~~~~~~~dg~-~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~ 395 (571)
..+.+.++..+|. .+.+++|.|... .++.|+||++|||+....... .+...+..|++ .||.|+++||||++
T Consensus 50 ~~~~~~i~~~~g~~~l~~~~~~P~~~---~~~~p~vv~~HGgg~~~g~~~----~~~~~~~~la~~~G~~Vv~~d~rg~~ 122 (323)
T 1lzl_A 50 SLRELSAPGLDGDPEVKIRFVTPDNT---AGPVPVLLWIHGGGFAIGTAE----SSDPFCVEVARELGFAVANVEYRLAP 122 (323)
T ss_dssp EEEEEEECCSTTCCCEEEEEEEESSC---CSCEEEEEEECCSTTTSCCGG----GGHHHHHHHHHHHCCEEEEECCCCTT
T ss_pred eEEEEEecCCCCCceeEEEEEecCCC---CCCCcEEEEECCCccccCChh----hhHHHHHHHHHhcCcEEEEecCCCCC
Confidence 4577888888886 799999999752 257899999999874322111 23445677776 59999999999988
Q ss_pred CChhhhHHHHhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCCC----eeEEEEEcCccC
Q 008274 396 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPVT 468 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~~----~~~~~v~~~~~~ 468 (571)
.+... ....|+.++++++.+. ..+|.++++|+|||+||.+++.++.++++ .++++++.+|+.
T Consensus 123 ~~~~~-----------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~ 191 (323)
T 1lzl_A 123 ETTFP-----------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPEL 191 (323)
T ss_dssp TSCTT-----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCC
T ss_pred CCCCC-----------chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCcc
Confidence 65421 1257888889988774 34678899999999999999999987655 489999999987
Q ss_pred Ccccccc-----------------hhhhhhcCCCCCC---hhhhccCCcchhhccCC--CcEEEEecCCCCCCChHHHHH
Q 008274 469 SWDGYDT-----------------FYTEKYMGLPSED---PVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRHTAR 526 (571)
Q Consensus 469 ~~~~~~~-----------------~~~~~~~g~~~~~---~~~~~~~s~~~~~~~~~--~p~lli~G~~D~~v~~~~~~~ 526 (571)
+...... .+...+++..... .......+|+.. ..++ +|+||+||+.|..+ .++..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~~~--~~~~~ 268 (323)
T 1lzl_A 192 DDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDPLR--DEGIE 268 (323)
T ss_dssp CTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCTTH--HHHHH
T ss_pred CCCcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccC-cccCCCChhheEECCcCCch--HHHHH
Confidence 7542111 1112233322110 111122334322 2233 69999999999987 57889
Q ss_pred HHHHHHHcCCCeeEEEcCCCCCCCCCC---CcHHHHHHHHHHHHHHhC
Q 008274 527 LINALVAARKPYEILIFPDERHMPRRH---RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 527 ~~~~l~~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~i~~fl~~~l 571 (571)
++++|++.+.+++++++|+++|++... +....+.+.+.+||+++|
T Consensus 269 ~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l 316 (323)
T 1lzl_A 269 YALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGL 316 (323)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999986422 236788999999999875
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-23 Score=199.10 Aligned_cols=241 Identities=15% Similarity=0.110 Sum_probs=161.8
Q ss_pred CeEEEEEc-CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECC--CCCC
Q 008274 319 PDIVQIQA-NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDN--RGTA 395 (571)
Q Consensus 319 ~~~~~~~~-~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~--rG~~ 395 (571)
.+.+.+.+ ..|..+.+.+|.|++.. ++++|+||++||+++... .|.. .....+.++++||+|+++|+ ||.+
T Consensus 16 ~~~~~~~s~~~~~~~~~~v~~P~~~~--~~~~p~vv~lHG~~~~~~---~~~~-~~~~~~~~~~~g~~vv~~d~~~rG~~ 89 (282)
T 3fcx_A 16 QKVFEHDSVELNCKMKFAVYLPPKAE--TGKCPALYWLSGLTCTEQ---NFIS-KSGYHQSASEHGLVVIAPDTSPRGCN 89 (282)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGG--TSCEEEEEEECCTTCCSH---HHHH-HSCCHHHHHHHTCEEEEECSCSSCCC
T ss_pred EEEEEEEchhcCCeeEEEEEcCCCCC--CCCCCEEEEEcCCCCCcc---chhh-cchHHHHhhcCCeEEEEeccccCccc
Confidence 34455554 46788999999998642 268999999999877643 2321 11225778899999999999 8877
Q ss_pred CChhhhHHH------HhccCCC-------CCchhHH-HHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEE
Q 008274 396 RRGLKFEAS------IKHNCGR-------IDAEDQL-TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 461 (571)
Q Consensus 396 ~~~~~~~~~------~~~~~~~-------~~~~D~~-~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~ 461 (571)
.++...... .+..... ....++. +++.++.++..+|++|++|+|+|+||++++.++.++|++|+++
T Consensus 90 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 169 (282)
T 3fcx_A 90 IKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSV 169 (282)
T ss_dssp C--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCE
T ss_pred cccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEE
Confidence 654321000 0000000 0012233 4444554455578899999999999999999999999999999
Q ss_pred EEcCccCCccccc--chhhhhhcCCCCCChhhhccCCcchhhccC---CCcEEEEecCCCCCCChHH--HHHHHHHHHHc
Q 008274 462 VSGAPVTSWDGYD--TFYTEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDENVHFRH--TARLINALVAA 534 (571)
Q Consensus 462 v~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~---~~p~lli~G~~D~~v~~~~--~~~~~~~l~~~ 534 (571)
++.+|+.+..... ......+++.. ...+...++...+.++ ++|+|++||++|..++..+ ++++.++|++.
T Consensus 170 v~~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~~l~~~ 246 (282)
T 3fcx_A 170 SAFAPICNPVLCPWGKKAFSGYLGTD---QSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEK 246 (282)
T ss_dssp EEESCCCCGGGSHHHHHHHHHHHC------CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHHHHHHHT
T ss_pred EEeCCccCcccCchhHHHHHHhcCCc---hhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHHHHHHHc
Confidence 9999988743211 11112233332 2344455665555554 6899999999999986554 66899999999
Q ss_pred CCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 535 RKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 535 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+.+++++++|+++|.+. ....+.++.++|+.++|
T Consensus 247 g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l 280 (282)
T 3fcx_A 247 KIPVVFRLQEDYDHSYY---FIATFITDHIRHHAKYL 280 (282)
T ss_dssp TCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHT
T ss_pred CCceEEEECCCCCcCHH---HHHhhhHHHHHHHHHhh
Confidence 99999999999999873 34456677788888765
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=207.09 Aligned_cols=282 Identities=11% Similarity=0.052 Sum_probs=170.2
Q ss_pred CCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhcc--CCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCC
Q 008274 271 MRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIKR--LQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPP 348 (571)
Q Consensus 271 g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~ 348 (571)
.+.++|.+.+...+...+++.. +|+..+ +.......+.... ..-...+.+.+.. +..+.+.+|.|.......++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~r-~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~ 82 (338)
T 2o7r_A 7 ETTGSSDPNTNLLKYLPIVLNP-DRTITR-PIQIPSTAASPDPTSSSPVLTKDLALNP--LHNTFVRLFLPRHALYNSAK 82 (338)
T ss_dssp -----------CTTTCSCEECT-TSCEEC-CSCCCBCCCCCCTTSSCSEEEEEEEEET--TTTEEEEEEEEGGGGGSSCC
T ss_pred CCceeeccCcccccccceEECC-CCeEEe-cCCCCCCCCCCCcccCCCEEEEEEEecC--CCCeEEEEEeCCCCCcCCCC
Confidence 4455565555445544455443 555333 2221111111111 1122345566654 45578888888652012357
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
.|+||++|||+........ ..|..++..|+ +.||.|+++|+||.+.... ...++|+.++++++.++
T Consensus 83 ~p~vv~~HGgg~~~~~~~~--~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~-----------~~~~~d~~~~~~~l~~~ 149 (338)
T 2o7r_A 83 LPLVVYFHGGGFILFSAAS--TIFHDFCCEMAVHAGVVIASVDYRLAPEHRL-----------PAAYDDAMEALQWIKDS 149 (338)
T ss_dssp EEEEEEECCSTTTSCCTTB--HHHHHHHHHHHHHHTCEEEEEECCCTTTTCT-----------THHHHHHHHHHHHHHTC
T ss_pred ceEEEEEcCCcCcCCCCCc--hhHHHHHHHHHHHCCcEEEEecCCCCCCCCC-----------chHHHHHHHHHHHHHhC
Confidence 8999999998754321111 12445677787 7899999999999765321 11268899999999876
Q ss_pred C------CCcCCcEEEEeechHHHHHHHHHhcCCC--------eeEEEEEcCccCCcccccch-----------------
Q 008274 428 G------LAKVGHIGLYGWSYGGYLSAITLARFPD--------VFQCAVSGAPVTSWDGYDTF----------------- 476 (571)
Q Consensus 428 ~------~~d~~~i~l~G~S~GG~~a~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~----------------- 476 (571)
. .+|.++++|+|||+||.+++.++.++|+ +++++|+.+|+.+.......
T Consensus 150 ~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (338)
T 2o7r_A 150 RDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLANDSRLPTFVLDL 229 (338)
T ss_dssp CCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHTTTCSSSCHHHHHH
T ss_pred CcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhccCCCcccCHHHHHH
Confidence 2 2577899999999999999999998887 89999999988754321100
Q ss_pred hhhhhcCC--CCCChh--hhccCCc---chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 477 YTEKYMGL--PSEDPV--GYEYSSV---MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 477 ~~~~~~g~--~~~~~~--~~~~~s~---~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
+...++.. ...... .....++ +..+.++.+|+|+++|++|..++ .+.+++++|++.+.+++++++++++|.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~g~gH~ 307 (338)
T 2o7r_A 230 IWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMID--RQMELAERLEKKGVDVVAQFDVGGYHA 307 (338)
T ss_dssp HHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEEEESSCCTT
T ss_pred HHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchH--HHHHHHHHHHHCCCcEEEEEECCCceE
Confidence 00111110 000000 0001111 12334455699999999999886 567788999999999999999999998
Q ss_pred CCC--CCcHHHHHHHHHHHHHHhC
Q 008274 550 PRR--HRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 550 ~~~--~~~~~~~~~~i~~fl~~~l 571 (571)
+.. ++....+.+.+.+||++++
T Consensus 308 ~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 308 VKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp GGGTCHHHHHHHHHHHHHHHC---
T ss_pred EeccChHHHHHHHHHHHHHHHhhc
Confidence 732 2344788999999998753
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=202.11 Aligned_cols=237 Identities=20% Similarity=0.240 Sum_probs=166.8
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+.+.++..||..+.++++.|.+. ..++.|+||++||+++... .|. ..++..|+++||.|+.+|+||+|.+
T Consensus 67 ~~~~~~~~~~~g~~~~~~~~~p~~~--~~~~~p~vv~~hG~~~~~~---~~~---~~~~~~l~~~G~~v~~~d~~g~g~s 138 (367)
T 2hdw_A 67 EHRKVTFANRYGITLAADLYLPKNR--GGDRLPAIVIGGPFGAVKE---QSS---GLYAQTMAERGFVTLAFDPSYTGES 138 (367)
T ss_dssp EEEEEEEECTTSCEEEEEEEEESSC--CSSCEEEEEEECCTTCCTT---SHH---HHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred eeEEEEEecCCCCEEEEEEEeCCCC--CCCCCCEEEEECCCCCcch---hhH---HHHHHHHHHCCCEEEEECCCCcCCC
Confidence 5678889998999999999999762 2357899999999876432 221 2357889999999999999999866
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc----c
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG----Y 473 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~----~ 473 (571)
....... .......+|+.++++++.++..+|.++++++|||+||.+++.++.++| .++++|+.+|...... +
T Consensus 139 ~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~ 214 (367)
T 2hdw_A 139 GGQPRNV---ASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGY 214 (367)
T ss_dssp CCSSSSC---CCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTT
T ss_pred CCcCccc---cchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhh
Confidence 5322110 000123688999999999988788899999999999999999999988 4788888887531000 0
Q ss_pred cc-----------------------------------------h----hhhhhc---C-CCC----------CChhhhcc
Q 008274 474 DT-----------------------------------------F----YTEKYM---G-LPS----------EDPVGYEY 494 (571)
Q Consensus 474 ~~-----------------------------------------~----~~~~~~---g-~~~----------~~~~~~~~ 494 (571)
.. . ..+.+. + .+. .....+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (367)
T 2hdw_A 215 NDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMN 294 (367)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTT
T ss_pred ccccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcC
Confidence 00 0 000000 0 000 01122334
Q ss_pred CCcchhhccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 495 SSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 495 ~s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.++...+.+++ +|+|+++|++|. ++..+.+++++ .+.+++++++|+++|.+........+.+.+.+||+++|
T Consensus 295 ~~~~~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 295 MPILTYIKEISPRPILLIHGERAH--SRYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp SCSCTTGGGGTTSCEEEEEETTCT--THHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred CChhHhHHhhcCCceEEEecCCCC--CHHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 56677788999 999999999999 77777777765 57899999999999984211111116788999999886
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=198.03 Aligned_cols=231 Identities=17% Similarity=0.144 Sum_probs=164.4
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhC-CcEEEEECCCCC
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK-GILVWKLDNRGT 394 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~ 394 (571)
....+.+.++..+| .+.+++|.|... ++.|+||++||++....... .+..++..|+++ ||.|+++|+||+
T Consensus 45 ~~~~~~~~i~~~~g-~i~~~~~~p~~~----~~~p~vv~~HGgg~~~g~~~----~~~~~~~~la~~~g~~v~~~d~rg~ 115 (311)
T 2c7b_A 45 IAETRDVHIPVSGG-SIRARVYFPKKA----AGLPAVLYYHGGGFVFGSIE----THDHICRRLSRLSDSVVVSVDYRLA 115 (311)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEESSSC----SSEEEEEEECCSTTTSCCTG----GGHHHHHHHHHHHTCEEEEECCCCT
T ss_pred cceEEEEEecCCCC-cEEEEEEecCCC----CCCcEEEEECCCcccCCChh----hhHHHHHHHHHhcCCEEEEecCCCC
Confidence 34567788888888 899999999753 45799999999873221111 244567778775 999999999998
Q ss_pred CCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC---CCcCCcEEEEeechHHHHHHHHHhcCCC----eeEEEEEcCcc
Q 008274 395 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPV 467 (571)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~~~~----~~~~~v~~~~~ 467 (571)
+.+.... ...|+.++++++.+.. .+|+++++|+|||+||.+++.++.++|+ +++++++.+|+
T Consensus 116 g~~~~~~-----------~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~ 184 (311)
T 2c7b_A 116 PEYKFPT-----------AVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPV 184 (311)
T ss_dssp TTSCTTH-----------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCC
T ss_pred CCCCCCc-----------cHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCc
Confidence 8654211 2578888888887752 4677899999999999999999987665 58999999998
Q ss_pred CCccccc--------------------chhhhhhcCCCCCChhhhccCCcchh-hccCCCcEEEEecCCCCCCChHHHHH
Q 008274 468 TSWDGYD--------------------TFYTEKYMGLPSEDPVGYEYSSVMHH-VHKMKGKLLLVHGMIDENVHFRHTAR 526 (571)
Q Consensus 468 ~~~~~~~--------------------~~~~~~~~g~~~~~~~~~~~~s~~~~-~~~~~~p~lli~G~~D~~v~~~~~~~ 526 (571)
.++.... .++...+.+.+.. ......+|+.. +..+ +|+|+++|+.|..++ .+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~~--~~~~ 259 (311)
T 2c7b_A 185 VNMTGVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEE--AYDFKASPLLADLGGL-PPALVVTAEYDPLRD--EGEL 259 (311)
T ss_dssp CCCSSCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTG--GGSTTTCGGGSCCTTC-CCEEEEEETTCTTHH--HHHH
T ss_pred cCCccccccCCccHHHhccCCCCHHHHHHHHHHhCCCCcc--ccCcccCcccccccCC-CcceEEEcCCCCchH--HHHH
Confidence 8732110 0111122222111 01112233322 2223 399999999999875 5677
Q ss_pred HHHHHHHcCCCeeEEEcCCCCCCCCC----CCcHHHHHHHHHHHHHHhC
Q 008274 527 LINALVAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 527 ~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l 571 (571)
++++++..+.+++++++++++|.+.. .+....+.+.+.+||+++|
T Consensus 260 ~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (311)
T 2c7b_A 260 YAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGL 308 (311)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHh
Confidence 88889999999999999999998742 3456788999999999875
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-22 Score=183.77 Aligned_cols=209 Identities=22% Similarity=0.240 Sum_probs=159.7
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
...+.+.++..+| .+.++++.|++. .+++.|+||++||++....... ...+..+++.|+++||.|+++|+||+|.
T Consensus 8 ~~~~~~~~~~~~g-~~~~~~~~p~~~--~~~~~~~vv~~HG~~~~~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~ 82 (220)
T 2fuk_A 8 TESAALTLDGPVG-PLDVAVDLPEPD--VAVQPVTAIVCHPLSTEGGSMH--NKVVTMAARALRELGITVVRFNFRSVGT 82 (220)
T ss_dssp SSCEEEEEEETTE-EEEEEEECCCTT--SCCCSEEEEEECSCTTTTCSTT--CHHHHHHHHHHHTTTCEEEEECCTTSTT
T ss_pred ccceEEEEeCCCC-eEEEEEEeCCCC--CccccCEEEEECCCCCcCCccc--chHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 4568899999888 899999999752 1135799999999643211111 1124556888999999999999999987
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 476 (571)
+.... .......+|+.++++++.++. +.++++++|||+||.+++.++.++ .++++|+.+|......
T Consensus 83 s~~~~------~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~---- 148 (220)
T 2fuk_A 83 SAGSF------DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD---- 148 (220)
T ss_dssp CCSCC------CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC----
T ss_pred CCCCc------ccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh----
Confidence 65432 112234788999999998875 667999999999999999999887 7899999888765321
Q ss_pred hhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcH
Q 008274 477 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR 556 (571)
Q Consensus 477 ~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 556 (571)
+ ..+. ...|+|+++|++|..++++.+..+++++ ..+++++++++++|.+.. ..
T Consensus 149 ---------------~------~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~~~~--~~ 201 (220)
T 2fuk_A 149 ---------------F------SDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETL---EQQPTLVRMPDTSHFFHR--KL 201 (220)
T ss_dssp ---------------C------TTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTC---SSCCEEEEETTCCTTCTT--CH
T ss_pred ---------------h------hhcc-cCCcEEEEECCCCcccCHHHHHHHHHHh---CcCCcEEEeCCCCceehh--hH
Confidence 0 0111 1478999999999999999988888776 357899999999999854 46
Q ss_pred HHHHHHHHHHHHHhC
Q 008274 557 IYMEERIWEFIERTL 571 (571)
Q Consensus 557 ~~~~~~i~~fl~~~l 571 (571)
..+.+.+.+||.++|
T Consensus 202 ~~~~~~i~~~l~~~l 216 (220)
T 2fuk_A 202 IDLRGALQHGVRRWL 216 (220)
T ss_dssp HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHh
Confidence 678899999998875
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=193.95 Aligned_cols=242 Identities=14% Similarity=0.055 Sum_probs=168.0
Q ss_pred CCeEEEEEc-CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 318 PPDIVQIQA-NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 318 ~~~~~~~~~-~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
..+.+.+.+ .+|..+.+.+|.|++.. ..+++|+||++||+++... .|... ....+.+++.|++|+++|.++.|.
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~~~-~~~~~p~vv~lHG~~~~~~---~~~~~-~~~~~~~~~~g~~vv~pd~~~~g~ 90 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQAS-TGAKVPVLYWLSGLTCSDE---NFMQK-AGAQRLAAELGIAIVAPDTSPRGE 90 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG-TTCCEEEEEEECCTTCCSS---HHHHH-SCCHHHHHHHTCEEEEECSSCCST
T ss_pred cEEEEEEeccccCCeeEEEEEeCCCCC-CCCCccEEEEecCCCCChh---HHhhc-ccHHHHHhhCCeEEEEeCCccccc
Confidence 345566655 46788999999998742 2378999999999876543 33221 113567778899999999886543
Q ss_pred ChhhhHH-------HHhccCCC------CC-chhH-HHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEE
Q 008274 397 RGLKFEA-------SIKHNCGR------ID-AEDQ-LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 461 (571)
Q Consensus 397 ~~~~~~~-------~~~~~~~~------~~-~~D~-~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~ 461 (571)
....... ..+..... .. ...+ .+.+.++.+...+ +++++|+|||+||++++.++.++|++|+++
T Consensus 91 ~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 169 (280)
T 3i6y_A 91 GVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSV 169 (280)
T ss_dssp TCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCE
T ss_pred ccCcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEE
Confidence 2100000 00000000 01 1122 2344455444333 589999999999999999999999999999
Q ss_pred EEcCccCCccccc--chhhhhhcCCCCCChhhhccCCcchhhccCC--CcEEEEecCCCCCCChHH-HHHHHHHHHHcCC
Q 008274 462 VSGAPVTSWDGYD--TFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRH-TARLINALVAARK 536 (571)
Q Consensus 462 v~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~--~p~lli~G~~D~~v~~~~-~~~~~~~l~~~~~ 536 (571)
++.+|+.+..... ......+++. +...+...+|...+.+++ +|+||+||+.|.+++.+. ++.+.++|++.+.
T Consensus 170 v~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~ 246 (280)
T 3i6y_A 170 SAFSPINNPVNCPWGQKAFTAYLGK---DTDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNY 246 (280)
T ss_dssp EEESCCCCGGGSHHHHHHHHHHHCS---CGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTC
T ss_pred EEeCCccccccCchHHHHHHHhcCC---chHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHcCC
Confidence 9999987754321 1112233342 345666778888888776 799999999999998765 8999999999999
Q ss_pred CeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 537 PYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 537 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+++++++|+++|.+. ....+.+++++|+.++|
T Consensus 247 ~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l 278 (280)
T 3i6y_A 247 PLELRSHEGYDHSYY---FIASFIEDHLRFHSNYL 278 (280)
T ss_dssp CEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCccHH---HHHHhHHHHHHHHHhhc
Confidence 999999999999872 34567788889998764
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=195.35 Aligned_cols=242 Identities=12% Similarity=0.081 Sum_probs=166.1
Q ss_pred CCeEEEEEc-CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 318 PPDIVQIQA-NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 318 ~~~~~~~~~-~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
..+.+.+.+ ..|.++.+.+|.|++.. ..+++|+||++||+++... .|.. .....+.+++.|++|+++|.++.|.
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~-~~~~~P~vv~lHG~~~~~~---~~~~-~~~~~~~~~~~g~~vv~~d~~~~g~ 88 (280)
T 3ls2_A 14 WHKQYTHSAVSTHCTMRFAVFLPPGAS-ESNKVPVLYWLSGLTCTDE---NFMQ-KAGAFKKAAELGIAIVAPDTSPRGD 88 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCB-TTBCEEEEEEECCTTCCSH---HHHH-HSCCHHHHHHHTCEEEECCSSCCST
T ss_pred eEEEEEEechhcCCceEEEEEcCCCCC-CCCCcCEEEEeCCCCCChh---hhhc-chhHHHHHhhCCeEEEEeCCccccc
Confidence 445566665 46788999999998753 3478999999999876543 3321 1123567778899999999775442
Q ss_pred C-----------hhhhHH-HHhccC-CCCC-chhHH-HHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEE
Q 008274 397 R-----------GLKFEA-SIKHNC-GRID-AEDQL-TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 461 (571)
Q Consensus 397 ~-----------~~~~~~-~~~~~~-~~~~-~~D~~-~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~ 461 (571)
. +..+.. .....+ +... ...+. +.+.++.+...+ .++++|+|||+||++|+.++.++|++|+++
T Consensus 89 ~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~ 167 (280)
T 3ls2_A 89 NVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV-TSTKAISGHSMGGHGALMIALKNPQDYVSA 167 (280)
T ss_dssp TSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEBTHHHHHHHHHHHHSTTTCSCE
T ss_pred ccccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCC-CCCeEEEEECHHHHHHHHHHHhCchhheEE
Confidence 2 111000 000000 0001 11222 334444444333 489999999999999999999999999999
Q ss_pred EEcCccCCccccc--chhhhhhcCCCCCChhhhccCCcchhhccCC----CcEEEEecCCCCCCChHH-HHHHHHHHHHc
Q 008274 462 VSGAPVTSWDGYD--TFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK----GKLLLVHGMIDENVHFRH-TARLINALVAA 534 (571)
Q Consensus 462 v~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~----~p~lli~G~~D~~v~~~~-~~~~~~~l~~~ 534 (571)
++.+|+.+..... ......+++. ....+...++...+.+++ +|+|++||+.|.+++.+. +..++++|++.
T Consensus 168 ~~~s~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~ 244 (280)
T 3ls2_A 168 SAFSPIVNPINCPWGVKAFTGYLGA---DKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQK 244 (280)
T ss_dssp EEESCCSCGGGSHHHHHHHHHHHCS---CGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHHH
T ss_pred EEecCccCcccCcchhhHHHhhcCc---hHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHHh
Confidence 9999988754321 1112233442 345566777877777775 499999999999999754 88999999999
Q ss_pred CCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 535 RKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 535 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+.++++.++|+++|.+. ......+..++|+.++|
T Consensus 245 g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l 278 (280)
T 3ls2_A 245 DYPLTLEMQTGYDHSYF---FISSFIDQHLVFHHQYL 278 (280)
T ss_dssp TCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCCchh---hHHHHHHHHHHHHHHHh
Confidence 99999999999999873 34556778889998864
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=195.33 Aligned_cols=242 Identities=13% Similarity=0.091 Sum_probs=168.0
Q ss_pred CCeEEEEEc-CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 318 PPDIVQIQA-NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 318 ~~~~~~~~~-~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
..+.+.+.+ ..|..+.+.+|.|++.. .+++|+||++||+++... .|... ....+.+.+.||.|+++|+||+|.
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~--~~~~p~vv~lHG~~~~~~---~~~~~-~~~~~~~~~~g~~vv~~d~~g~G~ 87 (278)
T 3e4d_A 14 MQGVFSHQSETLKSEMTFAVYVPPKAI--HEPCPVVWYLSGLTCTHA---NVMEK-GEYRRMASELGLVVVCPDTSPRGN 87 (278)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG--TSCEEEEEEECCTTCCSH---HHHHH-SCCHHHHHHHTCEEEECCSSCCST
T ss_pred cEEEEEEeccccCCcceEEEEcCCCCC--CCCCCEEEEEcCCCCCcc---chhhc-ccHHHHHhhCCeEEEecCCcccCc
Confidence 345566654 46788999999998642 368999999999876643 22211 113456667799999999998876
Q ss_pred ChhhhHHH--------HhccC------CCCCch-hH-HHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEE
Q 008274 397 RGLKFEAS--------IKHNC------GRIDAE-DQ-LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQC 460 (571)
Q Consensus 397 ~~~~~~~~--------~~~~~------~~~~~~-D~-~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~ 460 (571)
+....... .+... ...... .+ .++++++.+...+|+++++|+|||+||++++.++.++|++|++
T Consensus 88 s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~ 167 (278)
T 3e4d_A 88 DVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKS 167 (278)
T ss_dssp TSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSC
T ss_pred ccccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccce
Confidence 53211000 00000 000112 22 2355666666557889999999999999999999999999999
Q ss_pred EEEcCccCCccccc--chhhhhhcCCCCCChhhhccCCcchhhccCC--CcEEEEecCCCCCCChHH-HHHHHHHHHHcC
Q 008274 461 AVSGAPVTSWDGYD--TFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRH-TARLINALVAAR 535 (571)
Q Consensus 461 ~v~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~--~p~lli~G~~D~~v~~~~-~~~~~~~l~~~~ 535 (571)
+++.+|+.+..... ......+++. ....+...++...+.+++ +|+|++||+.|..++.+. +..+.++|++.+
T Consensus 168 ~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g 244 (278)
T 3e4d_A 168 CSAFAPIVAPSSADWSEPALEKYLGA---DRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTD 244 (278)
T ss_dssp EEEESCCSCGGGCTTTHHHHHHHHCS---CGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSS
T ss_pred EEEeCCcccccCCccchhhHHHhcCC---cHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHHcC
Confidence 99999987754311 1111233343 334566677777777765 499999999999998533 788999999999
Q ss_pred CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 536 KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 536 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.++++.++|+++|.+. ......+.+++|+.++|
T Consensus 245 ~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l 277 (278)
T 3e4d_A 245 IGLTLRMHDRYDHSYY---FISTFMDDHLKWHAERL 277 (278)
T ss_dssp CEEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHH
T ss_pred CCceEEEeCCCCcCHH---HHHHHHHHHHHHHHHhc
Confidence 9999999999999873 34566778889988764
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.4e-22 Score=197.35 Aligned_cols=233 Identities=14% Similarity=0.090 Sum_probs=163.2
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCC-------------CCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCc
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRY-------------GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGI 384 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~-------------~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~ 384 (571)
.+.+.+.. +..+.+.+|.|+.... ..++.|+||++|||+........ ..|..++..|+ +.||
T Consensus 72 ~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~--~~~~~~~~~la~~~g~ 147 (351)
T 2zsh_A 72 SFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANS--AIYDTLCRRLVGLCKC 147 (351)
T ss_dssp EEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTB--HHHHHHHHHHHHHHTS
T ss_pred EEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcc--hhHHHHHHHHHHHcCC
Confidence 34555554 4558888899876310 23578999999998764321111 12455677888 7899
Q ss_pred EEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC----CCcCC-cEEEEeechHHHHHHHHHhcCCC---
Q 008274 385 LVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG----LAKVG-HIGLYGWSYGGYLSAITLARFPD--- 456 (571)
Q Consensus 385 ~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~----~~d~~-~i~l~G~S~GG~~a~~~~~~~~~--- 456 (571)
.|+++|+||.+..... ..++|+.++++++.++. .+|.+ +++|+|||+||.+++.++.++|+
T Consensus 148 ~vv~~d~rg~~~~~~~-----------~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~ 216 (351)
T 2zsh_A 148 VVVSVNYRRAPENPYP-----------CAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGI 216 (351)
T ss_dssp EEEEECCCCTTTSCTT-----------HHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTC
T ss_pred EEEEecCCCCCCCCCc-----------hhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCC
Confidence 9999999997654311 12688999999998764 47889 99999999999999999998888
Q ss_pred eeEEEEEcCccCCcccccch-----------------hhhhhcCCCCCChhhhccCCcc----hhhccCCC-cEEEEecC
Q 008274 457 VFQCAVSGAPVTSWDGYDTF-----------------YTEKYMGLPSEDPVGYEYSSVM----HHVHKMKG-KLLLVHGM 514 (571)
Q Consensus 457 ~~~~~v~~~~~~~~~~~~~~-----------------~~~~~~g~~~~~~~~~~~~s~~----~~~~~~~~-p~lli~G~ 514 (571)
+++++|+.+|+.+....... +...+...... ......++. ..+.+++. |+|+++|+
T Consensus 217 ~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~i~~pP~Lii~G~ 294 (351)
T 2zsh_A 217 DVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGED--REHPACNPFSPRGKSLEGVSFPKSLVVVAG 294 (351)
T ss_dssp CCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCC--TTSTTTCTTSTTSCCCTTCCCCEEEEEEET
T ss_pred CeeEEEEECCccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCC--CCCcccCCCCCCccchhhCCCCCEEEEEcC
Confidence 89999999998764221100 01111111000 001111221 23445565 99999999
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCC---CCcHHHHHHHHHHHHHHh
Q 008274 515 IDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR---HRDRIYMEERIWEFIERT 570 (571)
Q Consensus 515 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~---~~~~~~~~~~i~~fl~~~ 570 (571)
+|..++ .+..++++|++.+.+++++++++++|.+.. .+....+.+.+.+||+++
T Consensus 295 ~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~~ 351 (351)
T 2zsh_A 295 LDLIRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNAE 351 (351)
T ss_dssp TSTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC-
T ss_pred CCcchH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 999876 678899999999999999999999998843 256788999999999864
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-22 Score=200.29 Aligned_cols=233 Identities=14% Similarity=0.045 Sum_probs=165.2
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.+.+.+...+|..+.+.+|.|.... +++|+||++|||+....... ...+...+..|+++||.|+++|+||++++.
T Consensus 82 ~~~~~~~~~~g~~l~~~v~~p~~~~---~~~p~vv~iHGgg~~~g~~~--~~~~~~~~~~la~~g~~vv~~d~r~~gg~~ 156 (361)
T 1jkm_A 82 TSTETILGVDGNEITLHVFRPAGVE---GVLPGLVYTHGGGMTILTTD--NRVHRRWCTDLAAAGSVVVMVDFRNAWTAE 156 (361)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTCC---SCEEEEEEECCSTTTSSCSS--SHHHHHHHHHHHHTTCEEEEEECCCSEETT
T ss_pred eeeeeeecCCCCeEEEEEEeCCCCC---CCCeEEEEEcCCccccCCCc--ccchhHHHHHHHhCCCEEEEEecCCCCCCC
Confidence 4567778888878999999997631 37899999999874322111 002444578888899999999999986543
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcC---CCcCCcEEEEeechHHHHHHHHHhc-----CCCeeEEEEEcCccCCc
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQG---LAKVGHIGLYGWSYGGYLSAITLAR-----FPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~~~~-----~~~~~~~~v~~~~~~~~ 470 (571)
.. ......+.|+.++++++.+.. .+| +|+|+|||+||.+++.++.. +|++++++|+.+|+.+.
T Consensus 157 ~~-------~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~ 227 (361)
T 1jkm_A 157 GH-------HPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 227 (361)
T ss_dssp EE-------CCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred CC-------CCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccc
Confidence 11 112223688999999998762 334 99999999999999999987 78789999999998876
Q ss_pred c---------cccch----------------hhhhhcCCCCCChhhhccCCcc----hhhccCCCcEEEEecCCCCCCCh
Q 008274 471 D---------GYDTF----------------YTEKYMGLPSEDPVGYEYSSVM----HHVHKMKGKLLLVHGMIDENVHF 521 (571)
Q Consensus 471 ~---------~~~~~----------------~~~~~~g~~~~~~~~~~~~s~~----~~~~~~~~p~lli~G~~D~~v~~ 521 (571)
. ..... +...+.+..... .....+|. ..+.++. |+||++|+.|..++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~- 303 (361)
T 1jkm_A 228 GYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHA--EDPIAWPYFASEDELRGLP-PFVVAVNELDPLRD- 303 (361)
T ss_dssp CTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTT--TCTTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH-
T ss_pred ccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCC--CCcccCccccChhhHcCCC-ceEEEEcCcCcchh-
Confidence 1 10000 011121111110 01112333 2345555 99999999999987
Q ss_pred HHHHHHHHHHHHcCCCeeEEEcCCCCCCCC-C----CCcH-HHHHHHHHHHHHHh
Q 008274 522 RHTARLINALVAARKPYEILIFPDERHMPR-R----HRDR-IYMEERIWEFIERT 570 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~-~----~~~~-~~~~~~i~~fl~~~ 570 (571)
++..++++|.+.+.+++++++++++|.+. . .... ..+.+.+.+||+++
T Consensus 304 -~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 357 (361)
T 1jkm_A 304 -EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 357 (361)
T ss_dssp -HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHh
Confidence 88899999999999999999999999874 2 1334 77889999999875
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-22 Score=194.83 Aligned_cols=230 Identities=15% Similarity=0.117 Sum_probs=164.3
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTA 395 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~ 395 (571)
...+.+.++..++ .+.+++|.|.+. ++.|+||++|||+....... .+..++..|++ .||.|+++||||++
T Consensus 63 ~~~~~~~i~~~~~-~i~~~iy~P~~~----~~~p~vv~~HGGg~~~g~~~----~~~~~~~~La~~~g~~Vv~~Dyrg~~ 133 (323)
T 3ain_A 63 GKIEDITIPGSET-NIKARVYYPKTQ----GPYGVLVYYHGGGFVLGDIE----SYDPLCRAITNSCQCVTISVDYRLAP 133 (323)
T ss_dssp SEEEEEEEECSSS-EEEEEEEECSSC----SCCCEEEEECCSTTTSCCTT----TTHHHHHHHHHHHTSEEEEECCCCTT
T ss_pred cEEEEEEecCCCC-eEEEEEEecCCC----CCCcEEEEECCCccccCChH----HHHHHHHHHHHhcCCEEEEecCCCCC
Confidence 3567788888777 899999999752 56799999999874332222 34456777875 59999999999987
Q ss_pred CChhhhHHHHhccCCCCCchhHHHHHHHHHHcC-CC-cCCcEEEEeechHHHHHHHHHhcCCCee---EEEEEcCccCCc
Q 008274 396 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG-LA-KVGHIGLYGWSYGGYLSAITLARFPDVF---QCAVSGAPVTSW 470 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~-d~~~i~l~G~S~GG~~a~~~~~~~~~~~---~~~v~~~~~~~~ 470 (571)
.+... ...+|+.++++++.+.. .. |.++++|+|+|+||.+++.++.+++++. +++++.+|+.+.
T Consensus 134 ~~~~p-----------~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~ 202 (323)
T 3ain_A 134 ENKFP-----------AAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSF 202 (323)
T ss_dssp TSCTT-----------HHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSC
T ss_pred CCCCc-----------chHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccC
Confidence 65321 12678899999998762 11 7889999999999999999998877665 888999998765
Q ss_pred ccccch-----------------hhhhhcCCCCCChhhhccCCcchh-hccCCCcEEEEecCCCCCCChHHHHHHHHHHH
Q 008274 471 DGYDTF-----------------YTEKYMGLPSEDPVGYEYSSVMHH-VHKMKGKLLLVHGMIDENVHFRHTARLINALV 532 (571)
Q Consensus 471 ~~~~~~-----------------~~~~~~g~~~~~~~~~~~~s~~~~-~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~ 532 (571)
...... +...+++.... ......+|+.. +..+ +|+||++|+.|..+ .++..++++|+
T Consensus 203 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~sp~~~~l~~l-~P~lii~G~~D~l~--~~~~~~a~~l~ 277 (323)
T 3ain_A 203 DLITKSLYDNGEGFFLTREHIDWFGQQYLRSFAD--LLDFRFSPILADLNDL-PPALIITAEHDPLR--DQGEAYANKLL 277 (323)
T ss_dssp CSCCHHHHHHSSSSSSCHHHHHHHHHHHCSSGGG--GGCTTTCGGGSCCTTC-CCEEEEEETTCTTH--HHHHHHHHHHH
T ss_pred CCCCccHHHhccCCCCCHHHHHHHHHHhCCCCcc--cCCcccCcccCcccCC-CHHHEEECCCCccH--HHHHHHHHHHH
Confidence 322111 11112221110 00112234332 1222 49999999999987 57888999999
Q ss_pred HcCCCeeEEEcCCCCCCCCC----CCcHHHHHHHHHHHHHHhC
Q 008274 533 AARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 533 ~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l 571 (571)
+.+.+++++++++++|.+.. .+....+.+.+.+||+++|
T Consensus 278 ~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 320 (323)
T 3ain_A 278 QSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVF 320 (323)
T ss_dssp HTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999743 2456788999999998764
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-21 Score=185.71 Aligned_cols=225 Identities=12% Similarity=0.084 Sum_probs=157.6
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.....+...||..+.+.++.|... ++.|+||++||++........| ....++.+++. |.|+++|+||++.+.
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~~----~~~~~vv~~HG~~~~~~~~~~~---~~~~~~~l~~~-~~v~~~d~~~~~~~~ 74 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKNQ----PTKGVIVYIHGGGLMFGKANDL---SPQYIDILTEH-YDLIQLSYRLLPEVS 74 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSSS----SCSEEEEEECCSTTTSCCTTCS---CHHHHHHHTTT-EEEEEECCCCTTTSC
T ss_pred ceEEEEecCCcEEEEEEEEccCCC----CCCCEEEEEECCcccCCchhhh---HHHHHHHHHhC-ceEEeeccccCCccc
Confidence 356778888999999999998752 4679999999987332211122 23456777777 999999999887553
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc----
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD---- 474 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---- 474 (571)
... ..+|+.++++++.++ .+.++++|+|||+||.+++.++.+ ++++++|+.+|+.+.....
T Consensus 75 ~~~-----------~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~ 139 (275)
T 3h04_A 75 LDC-----------IIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTT 139 (275)
T ss_dssp HHH-----------HHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSC
T ss_pred cch-----------hHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccc
Confidence 211 167889999999887 367899999999999999999998 7889999999987652110
Q ss_pred ------------chhhhhhcCCCC-C---Chhh----------------h-------ccC-CcchhhccCCCcEEEEecC
Q 008274 475 ------------TFYTEKYMGLPS-E---DPVG----------------Y-------EYS-SVMHHVHKMKGKLLLVHGM 514 (571)
Q Consensus 475 ------------~~~~~~~~g~~~-~---~~~~----------------~-------~~~-s~~~~~~~~~~p~lli~G~ 514 (571)
......+..... . .... + ... .....+.+++ |+|+++|+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~ 218 (275)
T 3h04_A 140 NSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCN 218 (275)
T ss_dssp CHHHHHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEET
T ss_pred cchhhcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecC
Confidence 000000000000 0 0000 0 000 0111235666 99999999
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcH--HHHHHHHHHHHHHhC
Q 008274 515 IDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR--IYMEERIWEFIERTL 571 (571)
Q Consensus 515 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~--~~~~~~i~~fl~~~l 571 (571)
+|..++++.+..+++.+ .+.++.++|+++|.+...... ..+.+.+.+||+++|
T Consensus 219 ~D~~~~~~~~~~~~~~~----~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l 273 (275)
T 3h04_A 219 GDYDVPVEESEHIMNHV----PHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAIT 273 (275)
T ss_dssp TCSSSCTHHHHHHHTTC----SSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHhc----CCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999888887654 567899999999998554443 789999999999874
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=205.05 Aligned_cols=234 Identities=15% Similarity=0.148 Sum_probs=165.3
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
....+.+.++. +|..+.++++.+.. ++.|+||++||.++... .| +......+.++||.|+++|+||+|
T Consensus 132 ~~~~~~~~i~~-~~~~l~~~~~~~~~-----~~~p~vv~~HG~~~~~~---~~---~~~~~~~~~~~g~~vi~~D~~G~G 199 (405)
T 3fnb_A 132 KIPLKSIEVPF-EGELLPGYAIISED-----KAQDTLIVVGGGDTSRE---DL---FYMLGYSGWEHDYNVLMVDLPGQG 199 (405)
T ss_dssp SCCCEEEEEEE-TTEEEEEEEECCSS-----SCCCEEEEECCSSCCHH---HH---HHHTHHHHHHTTCEEEEECCTTST
T ss_pred CCCcEEEEEeE-CCeEEEEEEEcCCC-----CCCCEEEEECCCCCCHH---HH---HHHHHHHHHhCCcEEEEEcCCCCc
Confidence 34578888888 67889998885432 45699999999766543 22 112233566899999999999998
Q ss_pred CChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc
Q 008274 396 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT 475 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 475 (571)
.+.... .........|+.++++++..+. .+++|+|||+||++++.++..+| +++++|+.+|+.++.....
T Consensus 200 ~s~~~~-----~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~ 269 (405)
T 3fnb_A 200 KNPNQG-----LHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFR 269 (405)
T ss_dssp TGGGGT-----CCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHH
T ss_pred CCCCCC-----CCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHH
Confidence 764221 1122233677888888886543 78999999999999999999988 8999999999987532211
Q ss_pred hhhhhhcCCCC------------------------------CCh----hhhccCCcchhhccCCCcEEEEecCCCCCCCh
Q 008274 476 FYTEKYMGLPS------------------------------EDP----VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHF 521 (571)
Q Consensus 476 ~~~~~~~g~~~------------------------------~~~----~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~ 521 (571)
.........|. ... ..+....+...+.++++|+|+++|++|..+++
T Consensus 270 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~ 349 (405)
T 3fnb_A 270 ISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELM 349 (405)
T ss_dssp HHCC------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHH
T ss_pred HhhhhhhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCCh
Confidence 00000000000 000 01111222223678899999999999999999
Q ss_pred HHHHHHHHHHHHcCCCeeEEEcCCCCCCC--CCCCcHHHHHHHHHHHHHHhC
Q 008274 522 RHTARLINALVAARKPYEILIFPDERHMP--RRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~--~~~~~~~~~~~~i~~fl~~~l 571 (571)
.++..+++.+...+.+++++++++..|+. ...++...+.+.+.+||+++|
T Consensus 350 ~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l 401 (405)
T 3fnb_A 350 RQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIF 401 (405)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHh
Confidence 99999999999988999999997766652 245678889999999999864
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-22 Score=188.92 Aligned_cols=201 Identities=14% Similarity=0.175 Sum_probs=154.5
Q ss_pred CCeEEEEEcC--CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC
Q 008274 318 PPDIVQIQAN--DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 318 ~~~~~~~~~~--dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
..+.+.++.. ++. ..+.++.|... +.++.|+||++||.++... .+..+++.|+++||.|+++|+||++
T Consensus 24 ~~~~~~~~~~~~~~~-~~~~l~~p~~~--~~~~~p~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~g~g 93 (262)
T 1jfr_A 24 ATSQTSVSSLVASGF-GGGTIYYPTST--ADGTFGAVVISPGFTAYQS-------SIAWLGPRLASQGFVVFTIDTNTTL 93 (262)
T ss_dssp CEEEEEECTTTCSSS-CCEEEEEESCC--TTCCEEEEEEECCTTCCGG-------GTTTHHHHHHTTTCEEEEECCSSTT
T ss_pred CccceEecceeccCC-CceeEEecCCC--CCCCCCEEEEeCCcCCCch-------hHHHHHHHHHhCCCEEEEeCCCCCC
Confidence 4455666654 332 24667777652 2357899999999876543 2445688899999999999999988
Q ss_pred CChhhhHHHHhccCCCCCchhHHHHHHHHHH----cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc
Q 008274 396 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIK----QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 471 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~----~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~ 471 (571)
.+.... ..|+.++++++.+ ...++.++++|+|||+||.+++.++.++|+ ++++|+.+|...
T Consensus 94 ~~~~~~------------~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~-- 158 (262)
T 1jfr_A 94 DQPDSR------------GRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT-- 158 (262)
T ss_dssp CCHHHH------------HHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS--
T ss_pred CCCchh------------HHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc--
Confidence 664321 3577888888887 344577899999999999999999999988 789888877532
Q ss_pred cccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHH-HHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 472 GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRH-TARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 472 ~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
...+.++++|+|+++|++|..++++. +..+++.+. .+.+++++++++++|.+
T Consensus 159 --------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~H~~ 211 (262)
T 1jfr_A 159 --------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLP-GSLDKAYLELRGASHFT 211 (262)
T ss_dssp --------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSC-TTSCEEEEEETTCCTTG
T ss_pred --------------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhh-cCCCceEEEeCCCCcCC
Confidence 12345678999999999999999998 999999883 34688999999999987
Q ss_pred CCCCcHHHHHHHHHHHHHHhC
Q 008274 551 RRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 551 ~~~~~~~~~~~~i~~fl~~~l 571 (571)
.. +....+.+.+.+||+++|
T Consensus 212 ~~-~~~~~~~~~i~~fl~~~l 231 (262)
T 1jfr_A 212 PN-TSDTTIAKYSISWLKRFI 231 (262)
T ss_dssp GG-SCCHHHHHHHHHHHHHHH
T ss_pred cc-cchHHHHHHHHHHHHHHh
Confidence 43 345788999999998763
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=196.90 Aligned_cols=229 Identities=14% Similarity=0.066 Sum_probs=166.2
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCC
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGT 394 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~ 394 (571)
....+.++++..+|..+.+++|.|.. ++.|+||++|||+........ +...+..|+ +.||.|+++|||+.
T Consensus 57 ~~~~~~~~i~~~~G~~i~~~~~~P~~-----~~~p~vv~~HGgG~~~g~~~~----~~~~~~~la~~~g~~vv~~dyr~~ 127 (317)
T 3qh4_A 57 GVAVADDVVTGEAGRPVPVRIYRAAP-----TPAPVVVYCHAGGFALGNLDT----DHRQCLELARRARCAVVSVDYRLA 127 (317)
T ss_dssp CCEEEEEEEECTTSCEEEEEEEECSC-----SSEEEEEEECCSTTTSCCTTT----THHHHHHHHHHHTSEEEEECCCCT
T ss_pred cceEEEEEecCCCCCeEEEEEEecCC-----CCCcEEEEECCCcCccCChHH----HHHHHHHHHHHcCCEEEEecCCCC
Confidence 34668899999999899999999975 468999999998754321222 334456666 56999999999987
Q ss_pred CCChhhhHHHHhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCCC----eeEEEEEcCcc
Q 008274 395 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPV 467 (571)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~~----~~~~~v~~~~~ 467 (571)
++... ...++|+.++++++.++ ..+|.+||+|+|+|+||.+++.++.++++ .+++.++.+|+
T Consensus 128 p~~~~-----------p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~ 196 (317)
T 3qh4_A 128 PEHPY-----------PAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPV 196 (317)
T ss_dssp TTSCT-----------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCC
T ss_pred CCCCC-----------chHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECce
Confidence 65431 11267899999999885 45788999999999999999999886544 48999999999
Q ss_pred CCcccccc----------------hhhhhhcCCCCCChhhhccCCcchhhccCC--CcEEEEecCCCCCCChHHHHHHHH
Q 008274 468 TSWDGYDT----------------FYTEKYMGLPSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRHTARLIN 529 (571)
Q Consensus 468 ~~~~~~~~----------------~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~--~p~lli~G~~D~~v~~~~~~~~~~ 529 (571)
.+...... .+...+++.... -...+|.. ...++ +|+||+||+.|..++ ++..+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~-~~~l~~lpP~li~~G~~D~~~~--~~~~~a~ 269 (317)
T 3qh4_A 197 LDDRPTASRSEFRATPAFDGEAASLMWRHYLAGQTP----SPESVPGR-RGQLAGLPATLITCGEIDPFRD--EVLDYAQ 269 (317)
T ss_dssp CCSSCCHHHHHTTTCSSSCHHHHHHHHHHHHTTCCC----CTTTCGGG-CSCCTTCCCEEEEEEEESTTHH--HHHHHHH
T ss_pred ecCCCCcCHHHhcCCCCcCHHHHHHHHHHhcCCCCC----CcccCCCc-ccccCCCCceeEEecCcCCCch--hHHHHHH
Confidence 87641100 011112221110 01112221 12222 499999999999865 7888999
Q ss_pred HHHHcCCCeeEEEcCCCCCCCC----CCCcHHHHHHHHHHHHHHhC
Q 008274 530 ALVAARKPYEILIFPDERHMPR----RHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~H~~~----~~~~~~~~~~~i~~fl~~~l 571 (571)
+|++.++++++++||+++|++. ..+....+.+.+.+||+++|
T Consensus 270 ~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l 315 (317)
T 3qh4_A 270 RLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAF 315 (317)
T ss_dssp HHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999962 23556888999999999864
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.1e-22 Score=188.96 Aligned_cols=203 Identities=16% Similarity=0.082 Sum_probs=153.2
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+...++..++..+.+.+|.|.+ ++.|+||++|||++...... .|..+++.|+++||.|+++|+||++..
T Consensus 37 ~~~~~~i~~~~~~~~~~~~~~p~~-----~~~p~vv~~HGgg~~~~~~~----~~~~~~~~l~~~G~~v~~~d~~~~~~~ 107 (262)
T 2pbl_A 37 DRARLNLSYGEGDRHKFDLFLPEG-----TPVGLFVFVHGGYWMAFDKS----SWSHLAVGALSKGWAVAMPSYELCPEV 107 (262)
T ss_dssp GGEEEEEESSSSTTCEEEEECCSS-----SCSEEEEEECCSTTTSCCGG----GCGGGGHHHHHTTEEEEEECCCCTTTS
T ss_pred cCCccccccCCCCCceEEEEccCC-----CCCCEEEEEcCcccccCChH----HHHHHHHHHHhCCCEEEEeCCCCCCCC
Confidence 345566666677778888888865 46799999999753211112 344567889999999999999988653
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC------CCeeEEEEEcCccCCcc
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF------PDVFQCAVSGAPVTSWD 471 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~------~~~~~~~v~~~~~~~~~ 471 (571)
.. .. ..+|+.++++++..+.. ++++|+|||+||.+++.++.++ |++++++|+.+|+.+..
T Consensus 108 ~~---~~--------~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~ 173 (262)
T 2pbl_A 108 RI---SE--------ITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLR 173 (262)
T ss_dssp CH---HH--------HHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCG
T ss_pred Ch---HH--------HHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCch
Confidence 31 11 16788999999987642 7899999999999999999887 88999999999988754
Q ss_pred cccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC
Q 008274 472 GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR 551 (571)
Q Consensus 472 ~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 551 (571)
.....+....+. ...+.+...++...+.++++|+|+++|++|..++++++..+++.+. ++++++++++|.+.
T Consensus 174 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~H~~~ 245 (262)
T 2pbl_A 174 PLLRTSMNEKFK---MDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-----ADHVIAFEKHHFNV 245 (262)
T ss_dssp GGGGSTTHHHHC---CCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-----CEEEEETTCCTTTT
T ss_pred HHHhhhhhhhhC---CCHHHHHhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-----CeEEEeCCCCcchH
Confidence 332222111111 1234455667777778889999999999999999999999999884 89999999999863
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-21 Score=192.64 Aligned_cols=229 Identities=17% Similarity=0.153 Sum_probs=162.7
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
.+...+|..+.+.++.|.+ ++.|+||++||.+++.. .|..++..|+++||.|+++|+||+|.+.....
T Consensus 39 ~~~~~dg~~l~~~~~~p~~-----~~~p~vv~~HG~~~~~~-------~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~ 106 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPTG-----TPKALIFVSHGAGEHSG-------RYEELARMLMGLDLLVFAHDHVGHGQSEGERM 106 (342)
T ss_dssp EEECTTSCEEEEEEECCSS-----CCSEEEEEECCTTCCGG-------GGHHHHHHHHTTTEEEEEECCTTSTTSCSSTT
T ss_pred eEEccCCeEEEEEEeCCCC-----CCCcEEEEECCCCcccc-------hHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCC
Confidence 7788899999999998875 45699999999876643 34567889999999999999999987753210
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc-------
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT------- 475 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~------- 475 (571)
. .......++|+.++++++..+ .+..+++|+|||+||.+++.++.++|++++++|+.+|.........
T Consensus 107 ~---~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 181 (342)
T 3hju_A 107 V---VSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLA 181 (342)
T ss_dssp C---CSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHH
T ss_pred C---cCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHH
Confidence 0 000011257888889988876 3567899999999999999999999999999999998765321100
Q ss_pred -hhhhhhcCCC----------CCCh---hhhcc---------------------CCcchhhccCCCcEEEEecCCCCCCC
Q 008274 476 -FYTEKYMGLP----------SEDP---VGYEY---------------------SSVMHHVHKMKGKLLLVHGMIDENVH 520 (571)
Q Consensus 476 -~~~~~~~g~~----------~~~~---~~~~~---------------------~s~~~~~~~~~~p~lli~G~~D~~v~ 520 (571)
.+...++... .... ..+.. .+....+.++++|+|+++|++|..++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~ 261 (342)
T 3hju_A 182 AKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCD 261 (342)
T ss_dssp HHHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSC
T ss_pred HHHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccC
Confidence 0000000000 0000 00000 01124467789999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCC--CcHHHHHHHHHHHHHHh
Q 008274 521 FRHTARLINALVAARKPYEILIFPDERHMPRRH--RDRIYMEERIWEFIERT 570 (571)
Q Consensus 521 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~fl~~~ 570 (571)
++.+..+++.+. +.++++++++++||.+... +....+.+.+++||+++
T Consensus 262 ~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~ 311 (342)
T 3hju_A 262 SKGAYLLMELAK--SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 311 (342)
T ss_dssp HHHHHHHHHHCC--CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcC--CCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcc
Confidence 999998888763 2368999999999987432 23567788899999875
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.9e-22 Score=193.59 Aligned_cols=190 Identities=16% Similarity=0.209 Sum_probs=151.6
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.+|.. .+.++.|... .+.|+||++||.++... .|..+++.|+++||.|+.+|+||.|.+....
T Consensus 79 ~~g~~-~~~~~~p~~~----~~~p~vv~~HG~~~~~~-------~~~~~~~~la~~G~~vv~~d~~g~g~s~~~~----- 141 (306)
T 3vis_A 79 ADGFG-GGTIYYPREN----NTYGAIAISPGYTGTQS-------SIAWLGERIASHGFVVIAIDTNTTLDQPDSR----- 141 (306)
T ss_dssp CSSSC-CEEEEEESSC----SCEEEEEEECCTTCCHH-------HHHHHHHHHHTTTEEEEEECCSSTTCCHHHH-----
T ss_pred cCCCc-ceEEEeeCCC----CCCCEEEEeCCCcCCHH-------HHHHHHHHHHhCCCEEEEecCCCCCCCcchH-----
Confidence 34543 3567777653 36899999999776543 3455788999999999999999988765321
Q ss_pred ccCCCCCchhHHHHHHHHHHc------CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhh
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQ------GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEK 480 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~------~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 480 (571)
..|+.++++++.+. ..+|.++++|+|||+||.+++.++.++|+ ++++++.+|...
T Consensus 142 -------~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~----------- 202 (306)
T 3vis_A 142 -------ARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL----------- 202 (306)
T ss_dssp -------HHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-----------
T ss_pred -------HHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC-----------
Confidence 36788889999887 67788999999999999999999999988 788888877532
Q ss_pred hcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChH-HHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHH
Q 008274 481 YMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFR-HTARLINALVAARKPYEILIFPDERHMPRRHRDRIYM 559 (571)
Q Consensus 481 ~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~ 559 (571)
...+.++++|+|+++|++|..++++ +...+++.+...+ +++++++++++|.+.. +....+
T Consensus 203 -----------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~-~~~~~~ 263 (306)
T 3vis_A 203 -----------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPT-DKAYLELDGASHFAPN-ITNKTI 263 (306)
T ss_dssp -----------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGG-SCCHHH
T ss_pred -----------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCC-CceEEEECCCCccchh-hchhHH
Confidence 1234567799999999999999998 6999998886654 8999999999999743 344778
Q ss_pred HHHHHHHHHHhC
Q 008274 560 EERIWEFIERTL 571 (571)
Q Consensus 560 ~~~i~~fl~~~l 571 (571)
.+.+.+||+++|
T Consensus 264 ~~~i~~fl~~~l 275 (306)
T 3vis_A 264 GMYSVAWLKRFV 275 (306)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 899999998864
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-21 Score=184.61 Aligned_cols=219 Identities=12% Similarity=0.035 Sum_probs=154.4
Q ss_pred CCCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccccccc---chhhhHHHHhC----CcEEE
Q 008274 316 LEPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINT---VDMRAQYLRSK----GILVW 387 (571)
Q Consensus 316 ~~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~---~~~~~~~l~~~----G~~v~ 387 (571)
..+.+.+.+.+. +|..+.+.+|.|++.. ..+++|+||++||+++... .|... +...++.|+++ ||.|+
T Consensus 29 ~g~~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~~P~vv~lHG~g~~~~---~~~~~~~~~~~~~~~l~~~g~~~~~~vv 104 (268)
T 1jjf_A 29 RGQVVNISYFSTATNSTRPARVYLPPGYS-KDKKYSVLYLLHGIGGSEN---DWFEGGGRANVIADNLIAEGKIKPLIIV 104 (268)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEECTTCC-TTSCBCEEEEECCTTCCTT---TTTTTTTCHHHHHHHHHHTTSSCCCEEE
T ss_pred CceEEEEEEeccccCCceEEEEEeCCCCC-CCCCccEEEEECCCCCCcc---hhhhccccHHHHHHHHHHcCCCCCEEEE
Confidence 445677777764 5788999999998752 2368999999999876532 33322 33346677765 59999
Q ss_pred EECCCCCCCCh-hhhHHHHhccCCCCCchh-HHHHHHHHHHcCCC--cCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE
Q 008274 388 KLDNRGTARRG-LKFEASIKHNCGRIDAED-QLTGAEWLIKQGLA--KVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS 463 (571)
Q Consensus 388 ~~d~rG~~~~~-~~~~~~~~~~~~~~~~~D-~~~~~~~l~~~~~~--d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~ 463 (571)
.+|+++.+... ..+... .++ +.++++++.++..+ |.++++|+|+|+||++++.++.++|++|+++++
T Consensus 105 ~~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~ 175 (268)
T 1jjf_A 105 TPNTNAAGPGIADGYENF---------TKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGP 175 (268)
T ss_dssp EECCCCCCTTCSCHHHHH---------HHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEE
T ss_pred EeCCCCCCccccccHHHH---------HHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEE
Confidence 99999865321 111110 123 34556666655434 789999999999999999999999999999999
Q ss_pred cCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCC-cEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEE
Q 008274 464 GAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKG-KLLLVHGMIDENVHFRHTARLINALVAARKPYEILI 542 (571)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~-p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 542 (571)
.+|..++.... ..+... ......+. |+|++||++|..++. +..+.++|++.+.++++++
T Consensus 176 ~s~~~~~~~~~-----~~~~~~-------------~~~~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~~~~~~~ 235 (268)
T 1jjf_A 176 ISAAPNTYPNE-----RLFPDG-------------GKAAREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINHVYWL 235 (268)
T ss_dssp ESCCTTSCCHH-----HHCTTT-------------THHHHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCCEEEE
T ss_pred eCCCCCCCchh-----hhcCcc-------------hhhhhhcCceEEEEecCCCCCccH--HHHHHHHHHHCCCceEEEE
Confidence 99976543211 111100 00112234 599999999999874 7789999999999999999
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 543 FPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 543 ~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+|+++|.+. ........+++||.++
T Consensus 236 ~~g~~H~~~---~~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 236 IQGGGHDFN---VWKPGLWNFLQMADEA 260 (268)
T ss_dssp ETTCCSSHH---HHHHHHHHHHHHHHHH
T ss_pred cCCCCcCHh---HHHHHHHHHHHHHHhc
Confidence 999999873 2345567788998764
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-21 Score=186.73 Aligned_cols=230 Identities=17% Similarity=0.148 Sum_probs=161.8
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
.+...+|.++.++++.|.+ ++.|+||++||.+++.. .|..+++.|+++||.|+++|+||+|.+.....
T Consensus 21 ~~~~~~g~~l~~~~~~~~~-----~~~~~vv~~hG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 88 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG-----TPKALIFVSHGAGEHSG-------RYEELARMLMGLDLLVFAHDHVGHGQSEGERM 88 (303)
T ss_dssp EEECTTSCEEEEEEECCSS-----CCSEEEEEECCTTCCGG-------GGHHHHHHHHHTTEEEEEECCTTSTTSCSSTT
T ss_pred eEecCCCeEEEEEEeccCC-----CCCeEEEEECCCCchhh-------HHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCC
Confidence 7778899999999998875 45799999999876543 35567889999999999999999987753211
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc-h-----
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT-F----- 476 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~----- 476 (571)
. ...-...++|+.++++++..+. +..+++++|||+||.+++.++.++|++++++++.+|......... .
T Consensus 89 ~---~~~~~~~~~d~~~~l~~l~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 163 (303)
T 3pe6_A 89 V---VSDFHVFVRDVLQHVDSMQKDY--PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLA 163 (303)
T ss_dssp C---CSSTHHHHHHHHHHHHHHHHHS--TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHH
T ss_pred C---CCCHHHHHHHHHHHHHHHhhcc--CCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHH
Confidence 0 0000112567888888887653 456899999999999999999999999999999998765321100 0
Q ss_pred --hhhhhcCC-C--C-------CCh---hhhcc---------------------CCcchhhccCCCcEEEEecCCCCCCC
Q 008274 477 --YTEKYMGL-P--S-------EDP---VGYEY---------------------SSVMHHVHKMKGKLLLVHGMIDENVH 520 (571)
Q Consensus 477 --~~~~~~g~-~--~-------~~~---~~~~~---------------------~s~~~~~~~~~~p~lli~G~~D~~v~ 520 (571)
........ . . ... ..+.. ......+.++++|+|+++|++|..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 243 (303)
T 3pe6_A 164 AKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCD 243 (303)
T ss_dssp HHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBC
T ss_pred HHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCC
Confidence 00000000 0 0 000 00000 01113467789999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCC--CcHHHHHHHHHHHHHHhC
Q 008274 521 FRHTARLINALVAARKPYEILIFPDERHMPRRH--RDRIYMEERIWEFIERTL 571 (571)
Q Consensus 521 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~fl~~~l 571 (571)
.+.+..+.+.+. +.++++++++++||.+... +....+.+.+++||++++
T Consensus 244 ~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~ 294 (303)
T 3pe6_A 244 SKGAYLLMELAK--SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 294 (303)
T ss_dssp HHHHHHHHHHCC--CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHhcc--cCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccC
Confidence 999988888763 2378999999999987432 235677888999998764
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-22 Score=191.72 Aligned_cols=229 Identities=19% Similarity=0.196 Sum_probs=154.9
Q ss_pred eEEEE-EcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 320 DIVQI-QANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 320 ~~~~~-~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
+.+.+ ...+|..+.+..+.+.. .+.|+||++||++++.. .| .+..+...++++||.|+++|+||+|.+.
T Consensus 12 ~~~~~~~~~~g~~l~~~~~~~~~-----~~~~~vv~~HG~~~~~~---~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 81 (270)
T 3llc_A 12 HAITVGQGSDARSIAALVRAPAQ-----DERPTCIWLGGYRSDMT---GT--KALEMDDLAASLGVGAIRFDYSGHGASG 81 (270)
T ss_dssp EEEEESSGGGCEEEEEEEECCSS-----TTSCEEEEECCTTCCTT---SH--HHHHHHHHHHHHTCEEEEECCTTSTTCC
T ss_pred ceEEEeeccCcceEEEEeccCCC-----CCCCeEEEECCCccccc---cc--hHHHHHHHHHhCCCcEEEeccccCCCCC
Confidence 33444 44688889888777653 23589999999766532 21 1233577788899999999999998876
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc---CC---CeeEEEEEcCccCCccc
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR---FP---DVFQCAVSGAPVTSWDG 472 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~---~~---~~~~~~v~~~~~~~~~~ 472 (571)
..........+ .+|+.++++++ ..++++++|||+||.+++.++.+ +| ++++++|+.+|..++..
T Consensus 82 ~~~~~~~~~~~----~~d~~~~~~~l------~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~ 151 (270)
T 3llc_A 82 GAFRDGTISRW----LEEALAVLDHF------KPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTS 151 (270)
T ss_dssp SCGGGCCHHHH----HHHHHHHHHHH------CCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHH
T ss_pred CccccccHHHH----HHHHHHHHHHh------ccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchh
Confidence 43221111111 34455555554 35789999999999999999999 99 99999999999876432
Q ss_pred ------ccchhhhhh-----c---CCCCCCh--------hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHH
Q 008274 473 ------YDTFYTEKY-----M---GLPSEDP--------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINA 530 (571)
Q Consensus 473 ------~~~~~~~~~-----~---g~~~~~~--------~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~ 530 (571)
+.......+ . ....... ..+........+.++++|+|+++|++|..++.+.+..+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~ 231 (270)
T 3llc_A 152 DLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEH 231 (270)
T ss_dssp HTTGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHh
Confidence 100000000 0 0000000 11122233445677889999999999999999999888877
Q ss_pred HHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 531 LVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 531 l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+.. .+++++++++++|.+...+....+.+.+.+||++.
T Consensus 232 ~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 269 (270)
T 3llc_A 232 LPA--DDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEPR 269 (270)
T ss_dssp SCS--SSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC--
T ss_pred cCC--CCeeEEEeCCCcccccccccHHHHHHHHHHHhcCC
Confidence 632 35899999999998766677888899999998753
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-22 Score=191.58 Aligned_cols=240 Identities=15% Similarity=0.141 Sum_probs=162.9
Q ss_pred CeEEEEEc-CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCC--CCC
Q 008274 319 PDIVQIQA-NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR--GTA 395 (571)
Q Consensus 319 ~~~~~~~~-~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r--G~~ 395 (571)
.+.+.+.+ ..|..+.+.+|.|++.. .+++|+||++||+++... .|.. .....+.+++.|++|+++|.+ |.+
T Consensus 22 ~~~~~~~s~~~~~~~~~~v~~P~~~~--~~~~p~vv~lHG~~~~~~---~~~~-~~~~~~~~~~~g~~vv~~d~~~rg~~ 95 (283)
T 4b6g_A 22 QQVWAHHAQTLQCEMKFAVYLPNNPE--NRPLGVIYWLSGLTCTEQ---NFIT-KSGFQRYAAEHQVIVVAPDTSPRGEQ 95 (283)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCTT--CCCEEEEEEECCTTCCSH---HHHH-HSCTHHHHHHHTCEEEEECSSCCSTT
T ss_pred EEEEEEechhhCCceEEEEEeCCCCC--CCCCCEEEEEcCCCCCcc---chhh-cccHHHHHhhCCeEEEEecccccccc
Confidence 34455554 46788999999998752 478999999999876543 3321 122356777889999999964 432
Q ss_pred CChh---------hhH-HHHhccC-CCCC-chhHH-HHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEE
Q 008274 396 RRGL---------KFE-ASIKHNC-GRID-AEDQL-TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAV 462 (571)
Q Consensus 396 ~~~~---------~~~-~~~~~~~-~~~~-~~D~~-~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v 462 (571)
..+. .+. ......+ +... ...+. +++.++.+.. .+.++++|+||||||++|+.++.++|++|++++
T Consensus 96 ~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~ 174 (283)
T 4b6g_A 96 VPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHF-PTNGKRSIMGHSMGGHGALVLALRNQERYQSVS 174 (283)
T ss_dssp SCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHS-CEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEE
T ss_pred ccccccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhC-CCCCCeEEEEEChhHHHHHHHHHhCCccceeEE
Confidence 1111 100 0000000 0001 11112 3334444332 256899999999999999999999999999999
Q ss_pred EcCccCCccccc--chhhhhhcCCCCCChhhhccCCcchhhccCC--CcEEEEecCCCCCCChH-HHHHHHHHHHHcCCC
Q 008274 463 SGAPVTSWDGYD--TFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFR-HTARLINALVAARKP 537 (571)
Q Consensus 463 ~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~--~p~lli~G~~D~~v~~~-~~~~~~~~l~~~~~~ 537 (571)
+.+|+.+..... ......+++. ....+...+|...+.+++ +|+|++||+.|.+++.+ ++..+.++|++.+.+
T Consensus 175 ~~s~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~ 251 (283)
T 4b6g_A 175 AFSPILSPSLVPWGEKAFTAYLGK---DREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQP 251 (283)
T ss_dssp EESCCCCGGGSHHHHHHHHHHHCS---CGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCC
T ss_pred EECCccccccCcchhhhHHhhcCC---chHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHcCCC
Confidence 999988754321 1112233343 345566677777777765 49999999999998863 388999999999999
Q ss_pred eeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 538 YEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 538 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+++.++|+++|.+. ......+..++|+.++|
T Consensus 252 ~~~~~~~g~~H~~~---~~~~~l~~~l~~~~~~l 282 (283)
T 4b6g_A 252 VDVRFHKGYDHSYY---FIASFIGEHIAYHAAFL 282 (283)
T ss_dssp CEEEEETTCCSSHH---HHHHHHHHHHHHHHTTC
T ss_pred ceEEEeCCCCcCHh---HHHHHHHHHHHHHHHhc
Confidence 99999999999873 34566788899998875
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.6e-22 Score=187.40 Aligned_cols=236 Identities=14% Similarity=0.009 Sum_probs=159.5
Q ss_pred CeEEEEEcC-CCcEEEEEEEcCCCCC---CCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC
Q 008274 319 PDIVQIQAN-DGTVLYGALYKPDESR---YGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT 394 (571)
Q Consensus 319 ~~~~~~~~~-dg~~l~~~~~~P~~~~---~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 394 (571)
.+.+++.+. .|..+.+.+|.|++.+ ...+++|+||++||+++... .|... ......+.+.|+.|+.+|++++
T Consensus 7 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~---~~~~~-~~~~~~~~~~~~~v~~~~~~~~ 82 (263)
T 2uz0_A 7 VMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHN---SWLKR-TNVERLLRGTNLIVVMPNTSNG 82 (263)
T ss_dssp EEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCTT---HHHHH-SCHHHHTTTCCCEEEECCCTTS
T ss_pred EeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHH---HHHhc-cCHHHHHhcCCeEEEEECCCCC
Confidence 456666654 5788999999998741 12367899999999876532 23210 0123444568999999999987
Q ss_pred CCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc
Q 008274 395 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD 474 (571)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~ 474 (571)
+....... ........+|+...++.+..+..+|.++++|+|||+||++++.++. +|++|+++++.+|..++....
T Consensus 83 ~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~ 157 (263)
T 2uz0_A 83 WYTDTQYG----FDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFS 157 (263)
T ss_dssp TTSBCTTS----CBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCC
T ss_pred ccccCCCc----ccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhcc
Confidence 54321100 0000001344555555443323457889999999999999999999 999999999999988765422
Q ss_pred c--------hhhhhhcCCCCCChhhhccCCcchhhccCC--CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcC
Q 008274 475 T--------FYTEKYMGLPSEDPVGYEYSSVMHHVHKMK--GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544 (571)
Q Consensus 475 ~--------~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~--~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 544 (571)
. .+...+++.+. ...+...++...+.+++ +|+|++||++|..++ .+..+++++++.+.++++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~ 233 (263)
T 2uz0_A 158 PESQNLGSPAYWRGVFGEIR--DWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGFDVTYSHSA 233 (263)
T ss_dssp GGGTTCSCHHHHHHHHCCCS--CTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEEEES
T ss_pred ccccccccchhHHHHcCChh--hhccccCCHHHHHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCCCeEEEECC
Confidence 1 11122233221 13445567777777776 799999999999874 5788999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 545 DERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 545 ~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+ +|.+. ......+.+++||.++|
T Consensus 234 g-~H~~~---~~~~~~~~~~~~l~~~l 256 (263)
T 2uz0_A 234 G-THEWY---YWEKQLEVFLTTLPIDF 256 (263)
T ss_dssp C-CSSHH---HHHHHHHHHHHHSSSCC
T ss_pred C-CcCHH---HHHHHHHHHHHHHHhhc
Confidence 9 99862 23466788899987654
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.87 E-value=5e-22 Score=181.38 Aligned_cols=188 Identities=11% Similarity=0.077 Sum_probs=130.7
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
+..|+||++||.+.+.. . +..+++.|...|+.|++||.+|.+.+...+......+ ...+++..+.++.+.+
T Consensus 20 ~a~~~Vv~lHG~G~~~~---~----~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~--~~~~~~~~~~i~~~~~ 90 (210)
T 4h0c_A 20 RAKKAVVMLHGRGGTAA---D----IISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQN--QPALDSALALVGEVVA 90 (210)
T ss_dssp TCSEEEEEECCTTCCHH---H----HHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGG--TTHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEeCCCCCHH---H----HHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccc--hHHHHHHHHHHHHHHH
Confidence 45689999999554422 2 2335667778899999999998764432222111111 1113333334443332
Q ss_pred ---cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhcc
Q 008274 427 ---QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHK 503 (571)
Q Consensus 427 ---~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~ 503 (571)
...+|++||+|+|+|+||++++.+++++|++|+++++.++..... ....... ....
T Consensus 91 ~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~--------------~~~~~~~-------~~~~ 149 (210)
T 4h0c_A 91 EIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQ--------------ELAIGNY-------KGDF 149 (210)
T ss_dssp HHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSS--------------SCCGGGC-------CBCC
T ss_pred HHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCCh--------------hhhhhhh-------hhhc
Confidence 245799999999999999999999999999999999988743210 0000000 0112
Q ss_pred CCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 504 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 504 ~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.++|+|++||++|++||++.++++++.|++.|.++++++||+.+|++. .+..+.+.+||.+
T Consensus 150 ~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~-----~~el~~i~~wL~k 210 (210)
T 4h0c_A 150 KQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS-----GDEIQLVNNTILK 210 (210)
T ss_dssp TTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC-----HHHHHHHHHTTTC
T ss_pred cCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC-----HHHHHHHHHHHcC
Confidence 247999999999999999999999999999999999999999999983 2234667788753
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=191.41 Aligned_cols=216 Identities=17% Similarity=0.140 Sum_probs=151.2
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHHHh
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
+|..+ +.|.+. + ...|+||++|||+....... .+...+..|+. .||.|+++|||+++.....
T Consensus 66 ~g~~~----~~p~~~--~-~~~~~vv~~HGgg~~~g~~~----~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~------ 128 (322)
T 3k6k_A 66 GGVPC----IRQATD--G-AGAAHILYFHGGGYISGSPS----THLVLTTQLAKQSSATLWSLDYRLAPENPFP------ 128 (322)
T ss_dssp TTEEE----EEEECT--T-CCSCEEEEECCSTTTSCCHH----HHHHHHHHHHHHHTCEEEEECCCCTTTSCTT------
T ss_pred CCEeE----EecCCC--C-CCCeEEEEEcCCcccCCChH----HHHHHHHHHHHhcCCEEEEeeCCCCCCCCCc------
Confidence 66555 455542 1 23355999999874322111 23445666765 5999999999987654311
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCe----eEEEEEcCccCCcccccchh-----
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDV----FQCAVSGAPVTSWDGYDTFY----- 477 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~----- 477 (571)
..++|+.++++++.++ .+|.++|+|+|+|+||.+++.++.++++. ++++++.+|+.++......+
T Consensus 129 -----~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~ 202 (322)
T 3k6k_A 129 -----AAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNLAD 202 (322)
T ss_dssp -----HHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHHTGG
T ss_pred -----hHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhhccC
Confidence 1268899999999987 45889999999999999999999876654 89999999988764321111
Q ss_pred -------------hhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcC
Q 008274 478 -------------TEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544 (571)
Q Consensus 478 -------------~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 544 (571)
...+.+... ......+|+.......+|+||+||+.|.. ..++..++++|++.|+++++++||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~sp~~~~~~~~pP~li~~G~~D~~--~~~~~~~~~~l~~~g~~~~l~~~~ 277 (322)
T 3k6k_A 203 RDFLAEPDTLGEMSELYVGGED---RKNPLISPVYADLSGLPEMLIHVGSEEAL--LSDSTTLAERAGAAGVSVELKIWP 277 (322)
T ss_dssp GCSSSCHHHHHHHHHHHHTTSC---TTCTTTCGGGSCCTTCCCEEEEEESSCTT--HHHHHHHHHHHHHTTCCEEEEEET
T ss_pred CCCcCCHHHHHHHHHHhcCCCC---CCCCcCCcccccccCCCcEEEEECCcCcc--HHHHHHHHHHHHHCCCCEEEEEEC
Confidence 111221110 01112344433333346999999999987 468899999999999999999999
Q ss_pred CCCCCCCC----CCcHHHHHHHHHHHHHHhC
Q 008274 545 DERHMPRR----HRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 545 ~~~H~~~~----~~~~~~~~~~i~~fl~~~l 571 (571)
+++|.+.. .+....+.+.+.+||+++|
T Consensus 278 g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3k6k_A 278 DMPHVFQMYGKFVNAADISIKEICHWISARI 308 (322)
T ss_dssp TCCTTGGGGTTTCHHHHHHHHHHHHHHHTTC
T ss_pred CCccccccccccChHHHHHHHHHHHHHHHHH
Confidence 99998732 2446788999999999875
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-21 Score=179.87 Aligned_cols=194 Identities=17% Similarity=0.050 Sum_probs=140.8
Q ss_pred EEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEE-------------------CCCCCCC
Q 008274 336 LYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKL-------------------DNRGTAR 396 (571)
Q Consensus 336 ~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~-------------------d~rG~~~ 396 (571)
++.|+.. ++.|+||++||.+++.. .|...+..|+++||.|+++ |+||..
T Consensus 14 ~~~p~~~----~~~~~vv~lHG~~~~~~-------~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~- 81 (232)
T 1fj2_A 14 AIVPAAR----KATAAVIFLHGLGDTGH-------GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLS- 81 (232)
T ss_dssp EEECCSS----CCSEEEEEECCSSSCHH-------HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCS-
T ss_pred cccCCCC----CCCceEEEEecCCCccc-------hHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCC-
Confidence 4556542 56799999999876543 2344567777789999998 555541
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 476 (571)
............ ..+|+.++++++.+ ..+|.++++++|||+||.+++.++.++|++++++++.+|.......
T Consensus 82 ~~~~~~~~~~~~----~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~--- 153 (232)
T 1fj2_A 82 PDSQEDESGIKQ----AAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS--- 153 (232)
T ss_dssp TTCCBCHHHHHH----HHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG---
T ss_pred cccccccHHHHH----HHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc---
Confidence 111000011111 14667777777766 5567889999999999999999999999999999999987653210
Q ss_pred hhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCC--eeEEEcCCCCCCCCCCC
Q 008274 477 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP--YEILIFPDERHMPRRHR 554 (571)
Q Consensus 477 ~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~--~~~~~~~~~~H~~~~~~ 554 (571)
+ + .....+..+++|+|+++|++|..++++.++.+++.+++.+.+ ++++++++++|.+
T Consensus 154 ----~---~----------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~---- 212 (232)
T 1fj2_A 154 ----F---P----------QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSS---- 212 (232)
T ss_dssp ----S---C----------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSC----
T ss_pred ----c---c----------ccccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCccc----
Confidence 0 0 001234567789999999999999999999999999988854 9999999999988
Q ss_pred cHHHHHHHHHHHHHHhC
Q 008274 555 DRIYMEERIWEFIERTL 571 (571)
Q Consensus 555 ~~~~~~~~i~~fl~~~l 571 (571)
..+..+.+.+||+++|
T Consensus 213 -~~~~~~~i~~~l~~~l 228 (232)
T 1fj2_A 213 -CQQEMMDVKQFIDKLL 228 (232)
T ss_dssp -CHHHHHHHHHHHHHHS
T ss_pred -CHHHHHHHHHHHHHhc
Confidence 2234588999998875
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-20 Score=171.20 Aligned_cols=196 Identities=17% Similarity=0.146 Sum_probs=151.7
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchh--hhHHHHhCCcEEEEECCCCCCCC
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDM--RAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~--~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
+...++. +|.++++++|.|.+ +.|+||++||+++... .+.. +++.|+++||.|+++|+||+|.+
T Consensus 5 ~~~~~~~-~g~~l~~~~~~~~~------~~~~vv~~hG~~~~~~-------~~~~~~~~~~l~~~G~~v~~~d~~g~g~s 70 (207)
T 3bdi_A 5 QEEFIDV-NGTRVFQRKMVTDS------NRRSIALFHGYSFTSM-------DWDKADLFNNYSKIGYNVYAPDYPGFGRS 70 (207)
T ss_dssp EEEEEEE-TTEEEEEEEECCTT------CCEEEEEECCTTCCGG-------GGGGGTHHHHHHTTTEEEEEECCTTSTTS
T ss_pred eeEEEee-CCcEEEEEEEeccC------CCCeEEEECCCCCCcc-------ccchHHHHHHHHhCCCeEEEEcCCccccc
Confidence 4444554 78899999999865 4589999999876643 2344 67899999999999999998876
Q ss_pred ---hhhhHHHHhccCCCC-CchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc
Q 008274 398 ---GLKFEASIKHNCGRI-DAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY 473 (571)
Q Consensus 398 ---~~~~~~~~~~~~~~~-~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~ 473 (571)
.... ... ..+++.+.+..+.++. +.++++++|||+||.+++.++.++|++++++++.+|..... +
T Consensus 71 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~-~ 139 (207)
T 3bdi_A 71 ASSEKYG--------IDRGDLKHAAEFIRDYLKAN--GVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES-L 139 (207)
T ss_dssp CCCTTTC--------CTTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG-G
T ss_pred CcccCCC--------CCcchHHHHHHHHHHHHHHc--CCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc-h
Confidence 3211 122 4667777777776653 45699999999999999999999999999999998863211 0
Q ss_pred cchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCC
Q 008274 474 DTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH 553 (571)
Q Consensus 474 ~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 553 (571)
...+.++++|+|+++|++|..++++....+.+.+ .++++.++++++|.+. .
T Consensus 140 ------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~~H~~~-~ 190 (207)
T 3bdi_A 140 ------------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASII----SGSRLEIVEGSGHPVY-I 190 (207)
T ss_dssp ------------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHS----TTCEEEEETTCCSCHH-H
T ss_pred ------------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhc----CCceEEEeCCCCCCcc-c
Confidence 2345677899999999999999999888887765 4678999999999863 3
Q ss_pred CcHHHHHHHHHHHHHH
Q 008274 554 RDRIYMEERIWEFIER 569 (571)
Q Consensus 554 ~~~~~~~~~i~~fl~~ 569 (571)
+....+.+.+.+||++
T Consensus 191 ~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 191 EKPEEFVRITVDFLRN 206 (207)
T ss_dssp HSHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHhh
Confidence 4467788999999875
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-21 Score=181.17 Aligned_cols=215 Identities=15% Similarity=0.001 Sum_probs=150.6
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHH-
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI- 405 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~- 405 (571)
.+| +..+++.|.+ +.|+||++||.+++.. .+..++..|+++||.|+++|+||+|.+........
T Consensus 10 ~~g--~~~~~~~~~~------~~~~vv~~hG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~ 74 (238)
T 1ufo_A 10 LAG--LSVLARIPEA------PKALLLALHGLQGSKE-------HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKS 74 (238)
T ss_dssp ETT--EEEEEEEESS------CCEEEEEECCTTCCHH-------HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTS
T ss_pred cCC--EEEEEEecCC------CccEEEEECCCcccch-------HHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccc
Confidence 355 4555677754 4589999999876543 23445677888999999999999887643211000
Q ss_pred ------hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhh
Q 008274 406 ------KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTE 479 (571)
Q Consensus 406 ------~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 479 (571)
.........+|+.++++++.+... .+++++|||+||.+++.++.++|+++++++..++..........
T Consensus 75 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~--- 148 (238)
T 1ufo_A 75 PRYVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQ--- 148 (238)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTC---
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhhh---
Confidence 000000125678888888876542 78999999999999999999999998888887765432111100
Q ss_pred hhcCCCCCChhhhccCCcchhhccC-CCcEEEEecCCCCCCChHHHHHHHHHHH-HcCC-CeeEEEcCCCCCCCCCCCcH
Q 008274 480 KYMGLPSEDPVGYEYSSVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINALV-AARK-PYEILIFPDERHMPRRHRDR 556 (571)
Q Consensus 480 ~~~g~~~~~~~~~~~~s~~~~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~-~~~~-~~~~~~~~~~~H~~~~~~~~ 556 (571)
+..|.+ ...+...++...+.++ ++|+|+++|++|..++++.+..+.+.+. +.+. +++++++++++|.+..
T Consensus 149 --~~~~~~-~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~---- 221 (238)
T 1ufo_A 149 --VVEDPG-VLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTP---- 221 (238)
T ss_dssp --CCCCHH-HHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCH----
T ss_pred --ccCCcc-cchhhcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHH----
Confidence 011110 2333445566667788 8999999999999999999999999998 7776 8999999999998732
Q ss_pred HHHHHHHHHHHHHh
Q 008274 557 IYMEERIWEFIERT 570 (571)
Q Consensus 557 ~~~~~~i~~fl~~~ 570 (571)
+..+.+.+||.++
T Consensus 222 -~~~~~~~~~l~~~ 234 (238)
T 1ufo_A 222 -LMARVGLAFLEHW 234 (238)
T ss_dssp -HHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHH
Confidence 3456677777665
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.87 E-value=9.5e-22 Score=185.12 Aligned_cols=206 Identities=16% Similarity=0.175 Sum_probs=149.3
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh-hhhHHH-HhccCCCCCchhHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG-LKFEAS-IKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~-~~~~~~-~~~~~~~~~~~D~~~~~~~l~ 425 (571)
+.|+||++||.+++.. .|..+++.|+++||.|+++|+||+|.+. ...... ....+ .+|+.++++++.
T Consensus 21 ~~~~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~----~~d~~~~i~~l~ 89 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPN-------DMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIW----WAESSAAVAHMT 89 (251)
T ss_dssp SSEEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHH----HHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCCHH-------HHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHH----HHHHHHHHHHHH
Confidence 4578889999776543 3456788999999999999999999873 322221 11121 577888888887
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc----hhhhhh---cCCCCCChhhhc-----
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT----FYTEKY---MGLPSEDPVGYE----- 493 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~~~~~~---~g~~~~~~~~~~----- 493 (571)
.+ .++++++|||+||.+++.++.++|++++++++.+|......... .+.... .+... ....+.
T Consensus 90 ~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 164 (251)
T 3dkr_A 90 AK----YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSD-ESTQILAYLPG 164 (251)
T ss_dssp TT----CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCC-CHHHHHHHHHH
T ss_pred Hh----cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCc-chhhHHhhhHH
Confidence 65 56999999999999999999999999999999998876322110 000000 01100 000000
Q ss_pred --------cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHH
Q 008274 494 --------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWE 565 (571)
Q Consensus 494 --------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 565 (571)
.......+.++++|+|+++|++|..++++.+..+++.+... .+++++++++++|.+....+...+.+.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~ 243 (251)
T 3dkr_A 165 QLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHALEEDVIA 243 (251)
T ss_dssp HHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhHHHHHHHH
Confidence 00123456778899999999999999999999998887543 578999999999998665568899999999
Q ss_pred HHHHh
Q 008274 566 FIERT 570 (571)
Q Consensus 566 fl~~~ 570 (571)
||++.
T Consensus 244 fl~~~ 248 (251)
T 3dkr_A 244 FMQQE 248 (251)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99874
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=189.76 Aligned_cols=225 Identities=16% Similarity=0.124 Sum_probs=159.8
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTAR 396 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~ 396 (571)
..+.+.++..+| .+.+++| +.. ++.|+||++|||+....... .+..++..|+ +.||.|+++||||++.
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~~-----~~~p~vv~~HGgg~~~g~~~----~~~~~~~~la~~~g~~Vv~~dyrg~g~ 123 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQK-----PDSPVLVYYHGGGFVICSIE----SHDALCRRIARLSNSTVVSVDYRLAPE 123 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ESS-----SSEEEEEEECCSTTTSCCTG----GGHHHHHHHHHHHTSEEEEEECCCTTT
T ss_pred eEEEEEecCCCC-cEEEEEE-cCC-----CCceEEEEECCcccccCChh----HhHHHHHHHHHHhCCEEEEecCCCCCC
Confidence 467888888888 7888888 432 56799999999874221111 2344677787 6899999999999886
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCCCe----eEEEEEcCccCC
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPDV----FQCAVSGAPVTS 469 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~----~~~~v~~~~~~~ 469 (571)
+.... ...|+.++++++.+. ..+|+++++|+|||+||.+++.++.++++. ++++++.+|+.+
T Consensus 124 ~~~p~-----------~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 192 (311)
T 1jji_A 124 HKFPA-----------AVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVN 192 (311)
T ss_dssp SCTTH-----------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCC
T ss_pred CCCCC-----------cHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccC
Confidence 64211 156788888888775 246788999999999999999999876654 999999999887
Q ss_pred cccccch------------------hhhhhcCCCCCChhhhccCCcch-hhccCCCcEEEEecCCCCCCChHHHHHHHHH
Q 008274 470 WDGYDTF------------------YTEKYMGLPSEDPVGYEYSSVMH-HVHKMKGKLLLVHGMIDENVHFRHTARLINA 530 (571)
Q Consensus 470 ~~~~~~~------------------~~~~~~g~~~~~~~~~~~~s~~~-~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~ 530 (571)
....... +...+++.... ......+|+. .+..+ +|+|+++|+.|..+ .++..++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~--~~~~~~~~~ 267 (311)
T 1jji_A 193 FVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREED--KFNPLASVIFADLENL-PPALIITAEYDPLR--DEGEVFGQM 267 (311)
T ss_dssp SSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGG--GGCTTTSGGGSCCTTC-CCEEEEEEEECTTH--HHHHHHHHH
T ss_pred CCCCCccHHHhcCCCccCCHHHHHHHHHHhCCCCcc--CCCcccCcccccccCC-ChheEEEcCcCcch--HHHHHHHHH
Confidence 5321111 11112211100 0111223332 12222 59999999999987 367889999
Q ss_pred HHHcCCCeeEEEcCCCCCCCCC----CCcHHHHHHHHHHHHHH
Q 008274 531 LVAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIER 569 (571)
Q Consensus 531 l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~ 569 (571)
|++.+.+++++++++++|++.. ......+.+.+.+||++
T Consensus 268 l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 268 LRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 9999999999999999998742 24567788999999975
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-21 Score=183.46 Aligned_cols=204 Identities=18% Similarity=0.202 Sum_probs=146.1
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|+||++||.++... .|..+++.|+++||.|+++|+||+|.+...........+ .+|+.++++++..+
T Consensus 40 ~~~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~----~~d~~~~i~~l~~~- 107 (270)
T 3rm3_A 40 PVGVLLVHGFTGTPH-------SMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDW----VASVEEGYGWLKQR- 107 (270)
T ss_dssp SEEEEEECCTTCCGG-------GTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCHHHH----HHHHHHHHHHHHTT-
T ss_pred CeEEEEECCCCCChh-------HHHHHHHHHHHCCCEEEEeCCCCCCCCccccccCCHHHH----HHHHHHHHHHHHhh-
Confidence 489999999776543 245678899999999999999999988653322222221 56788888888654
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhh-----hhhc---CC----CCCChhhhccC-
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYT-----EKYM---GL----PSEDPVGYEYS- 495 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~---g~----~~~~~~~~~~~- 495 (571)
..+++|+|||+||.+++.++.++|+ ++++|+.+|............ ..++ +. +......|...
T Consensus 108 ---~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (270)
T 3rm3_A 108 ---CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTP 183 (270)
T ss_dssp ---CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEEE
T ss_pred ---CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcccccC
Confidence 5789999999999999999999999 999999998765432111100 0000 00 00000011100
Q ss_pred ------------CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHH
Q 008274 496 ------------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 563 (571)
Q Consensus 496 ------------s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i 563 (571)
+....+.++++|+|+++|++|..++++.+..+++.+. +.+++++++|+++|.+........+.+.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~i 261 (270)
T 3rm3_A 184 TASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGIS--STEKEIVRLRNSYHVATLDYDQPMIIERS 261 (270)
T ss_dssp HHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSC--CSSEEEEEESSCCSCGGGSTTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcC--CCcceEEEeCCCCcccccCccHHHHHHHH
Confidence 1123467788999999999999999999998888763 24679999999999985544568899999
Q ss_pred HHHHHHh
Q 008274 564 WEFIERT 570 (571)
Q Consensus 564 ~~fl~~~ 570 (571)
.+||+++
T Consensus 262 ~~fl~~~ 268 (270)
T 3rm3_A 262 LEFFAKH 268 (270)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999876
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-21 Score=209.01 Aligned_cols=234 Identities=14% Similarity=0.153 Sum_probs=164.5
Q ss_pred EcCCCcE--EEEEEEcCCCCCCCCCCceEEEEEcCCCCcee----------e----------------------------
Q 008274 325 QANDGTV--LYGALYKPDESRYGPPPYKTLISVYGGPCVQL----------V---------------------------- 364 (571)
Q Consensus 325 ~~~dg~~--l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~----------~---------------------------- 364 (571)
+..||.. |.+.+|.|.+. +++|+||..|+...... +
T Consensus 179 ~~~DG~~d~L~a~l~~P~~~----~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~ 254 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKST----EKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKE 254 (763)
T ss_dssp TTCSSSCCEEEEEEEECCCS----SCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCCC----CcccEEEecCCcCCCCcccccccccccccccccccCcccccccccccccccccccc
Confidence 4579988 99999999863 68999998876332100 0
Q ss_pred -------ccccccc-chhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc---------
Q 008274 365 -------CDSWINT-VDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ--------- 427 (571)
Q Consensus 365 -------~~~~~~~-~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--------- 427 (571)
...|... .....++++++||+|+.+|+||+|++++.+. ..+..+.+|+.++++|+..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~~-----~~~~~e~~D~~a~IdwL~~~~~~~~d~~~ 329 (763)
T 1lns_A 255 LPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQT-----SGDYQQIYSMTAVIDWLNGRARAYTSRKK 329 (763)
T ss_dssp CCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCC-----TTSHHHHHHHHHHHHHHTTSSCEESSTTC
T ss_pred ccccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcCC-----CCCHHHHHHHHHHHHHHhhcccccccccc
Confidence 0011000 0123588999999999999999998865421 11223478999999999842
Q ss_pred ------CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc---------hhh--------------
Q 008274 428 ------GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT---------FYT-------------- 478 (571)
Q Consensus 428 ------~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~---------~~~-------------- 478 (571)
++ +..||+++|+||||++++.+|+.+|+.++++|+.+|+.++..+.. .+.
T Consensus 330 ~~~v~q~~-~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~ 408 (763)
T 1lns_A 330 THEIKASW-ANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSR 408 (763)
T ss_dssp CCEECCTT-EEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGG
T ss_pred cccccccC-CCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhh
Confidence 33 457999999999999999999999999999999998875422100 000
Q ss_pred ------------------hhh---c--CCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC
Q 008274 479 ------------------EKY---M--GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR 535 (571)
Q Consensus 479 ------------------~~~---~--g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~ 535 (571)
+.+ + ..+ ...+.|...++...+++|++|+|++||..|.++++.++.++++++.. +
T Consensus 409 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~-~ 486 (763)
T 1lns_A 409 NLDGADFLKGNAEYEKRLAEMTAALDRKSG-DYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPE-G 486 (763)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHCTTTC-CCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCT-T
T ss_pred hcCcchhhhHHHHHHHHHHHHHhhhhhccC-chhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhcc-C
Confidence 000 0 011 11123445677788999999999999999999999999999999876 6
Q ss_pred CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 536 KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 536 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.+.++++ ++++|..........+.+.+.+||+++|
T Consensus 487 ~~~~l~i-~~~gH~~~~~~~~~~~~~~i~~Ffd~~L 521 (763)
T 1lns_A 487 HAKHAFL-HRGAHIYMNSWQSIDFSETINAYFVAKL 521 (763)
T ss_dssp CCEEEEE-ESCSSCCCTTBSSCCHHHHHHHHHHHHH
T ss_pred CCeEEEE-eCCcccCccccchHHHHHHHHHHHHHHh
Confidence 6666655 5679986332233456789999999875
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.2e-21 Score=193.72 Aligned_cols=229 Identities=11% Similarity=-0.017 Sum_probs=160.3
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
...+.+.++. +|..+.++++.|.+. ++.|+||++||.++... . .+...+..++++||.|+++|+||+|.
T Consensus 166 ~~~~~v~i~~-~g~~l~~~~~~P~~~----~~~P~vv~~hG~~~~~~---~---~~~~~~~~l~~~G~~V~~~D~~G~G~ 234 (415)
T 3mve_A 166 YIIKQLEIPF-EKGKITAHLHLTNTD----KPHPVVIVSAGLDSLQT---D---MWRLFRDHLAKHDIAMLTVDMPSVGY 234 (415)
T ss_dssp SEEEEEEEEC-SSSEEEEEEEESCSS----SCEEEEEEECCTTSCGG---G---GHHHHHHTTGGGTCEEEEECCTTSGG
T ss_pred CCeEEEEEEE-CCEEEEEEEEecCCC----CCCCEEEEECCCCccHH---H---HHHHHHHHHHhCCCEEEEECCCCCCC
Confidence 4567788887 788999999999752 57899999999766532 1 22334677889999999999999886
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 476 (571)
+.... ...........+++++...+.+|.++|+|+|||+||++++.++..+|++++++|+.+|+.+.......
T Consensus 235 s~~~~-------~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~ 307 (415)
T 3mve_A 235 SSKYP-------LTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQ 307 (415)
T ss_dssp GTTSC-------CCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHH
T ss_pred CCCCC-------CCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHH
Confidence 64210 11111233456777887777788999999999999999999999999999999999988642111000
Q ss_pred --------h---hhhhcCCCCCChh----hhccCCcchh----hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCC
Q 008274 477 --------Y---TEKYMGLPSEDPV----GYEYSSVMHH----VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 537 (571)
Q Consensus 477 --------~---~~~~~g~~~~~~~----~~~~~s~~~~----~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~ 537 (571)
+ ....++....... .+...++... +.++++|+|+++|++|.++|++.+..+.+ ...+
T Consensus 308 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~----~~~~ 383 (415)
T 3mve_A 308 KLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAF----FSTY 383 (415)
T ss_dssp HHTTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHH----TBTT
T ss_pred HHHHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHH----hCCC
Confidence 0 0111222211111 1122222221 35788999999999999999998887665 4678
Q ss_pred eeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 538 YEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 538 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.+++++++..+ . .......+.+.+||+++|
T Consensus 384 ~~l~~i~g~~~-h---~~~~~~~~~i~~fL~~~L 413 (415)
T 3mve_A 384 GKAKKISSKTI-T---QGYEQSLDLAIKWLEDEL 413 (415)
T ss_dssp CEEEEECCCSH-H---HHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecCCCc-c---cchHHHHHHHHHHHHHHh
Confidence 99999999221 1 256778889999999864
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-21 Score=185.18 Aligned_cols=214 Identities=14% Similarity=0.122 Sum_probs=139.9
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC-CC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-AR 396 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~ 396 (571)
.++...++..+|..++++.+.|... .+++.|+||++||.+.+.. .|...++.|+++||.|+++|+||+ |.
T Consensus 6 ~~~~~~i~~~dG~~l~~~~~~p~~~--~~~~~~~VvllHG~g~~~~-------~~~~~~~~L~~~G~~Vi~~D~rGh~G~ 76 (305)
T 1tht_A 6 KTIAHVLRVNNGQELHVWETPPKEN--VPFKNNTILIASGFARRMD-------HFAGLAEYLSTNGFHVFRYDSLHHVGL 76 (305)
T ss_dssp SCEEEEEEETTTEEEEEEEECCCTT--SCCCSCEEEEECTTCGGGG-------GGHHHHHHHHTTTCCEEEECCCBCC--
T ss_pred cceEEEEEcCCCCEEEEEEecCccc--CCCCCCEEEEecCCccCch-------HHHHHHHHHHHCCCEEEEeeCCCCCCC
Confidence 3566778888999999998887642 1134588999999766532 356678899999999999999998 76
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-c
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-T 475 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-~ 475 (571)
+.......... ...+|+.++++++... +..+++|+||||||.+++.++.+ | +++++|+.++..++.... .
T Consensus 77 S~~~~~~~~~~----~~~~D~~~~~~~l~~~---~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~ 147 (305)
T 1tht_A 77 SSGSIDEFTMT----TGKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEK 147 (305)
T ss_dssp ------CCCHH----HHHHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHH
T ss_pred CCCcccceehH----HHHHHHHHHHHHHHhC---CCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHH
Confidence 64321100000 1146777888888743 34689999999999999999987 6 788888877765432110 0
Q ss_pred hhhhhhc-----CCCCC--------Chhhhc----cC------CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHH
Q 008274 476 FYTEKYM-----GLPSE--------DPVGYE----YS------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALV 532 (571)
Q Consensus 476 ~~~~~~~-----g~~~~--------~~~~~~----~~------s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~ 532 (571)
.....+. ..+.. ....+. .. +....+.++++|+|+++|++|..+|++.+..+++.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~ 227 (305)
T 1tht_A 148 ALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIR 227 (305)
T ss_dssp HHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCT
T ss_pred HhhhhhhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcC
Confidence 0000000 00000 000010 00 1223567889999999999999999998888776542
Q ss_pred HcCCCeeEEEcCCCCCCCC
Q 008274 533 AARKPYEILIFPDERHMPR 551 (571)
Q Consensus 533 ~~~~~~~~~~~~~~~H~~~ 551 (571)
..+.+++++|++||.+.
T Consensus 228 --~~~~~l~~i~~agH~~~ 244 (305)
T 1tht_A 228 --TGHCKLYSLLGSSHDLG 244 (305)
T ss_dssp --TCCEEEEEETTCCSCTT
T ss_pred --CCCcEEEEeCCCCCchh
Confidence 24689999999999873
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=173.60 Aligned_cols=184 Identities=13% Similarity=-0.010 Sum_probs=135.1
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHh--CCcEEEEECCCC-------------------CCCChhhhHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS--KGILVWKLDNRG-------------------TARRGLKFEASI 405 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rG-------------------~~~~~~~~~~~~ 405 (571)
++.|+||++||.+++.. .+...++.|++ +||.|+++|.|| .+.+........
T Consensus 12 ~~~~~vv~~HG~~~~~~-------~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~ 84 (218)
T 1auo_A 12 PADACVIWLHGLGADRY-------DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEEL 84 (218)
T ss_dssp CCSEEEEEECCTTCCTT-------TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHH
T ss_pred CCCcEEEEEecCCCChh-------hHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHH
Confidence 56799999999876532 34556788888 999999998764 221111000000
Q ss_pred hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh-cCCCeeEEEEEcCccCCcccccchhhhhhcCC
Q 008274 406 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA-RFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGL 484 (571)
Q Consensus 406 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 484 (571)
.. ..+|+.++++++.+ ..++.++++++|||+||.+++.++. ++|++++++++.+|..... .+
T Consensus 85 -~~----~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~--------~~--- 147 (218)
T 1auo_A 85 -EV----SAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF--------GD--- 147 (218)
T ss_dssp -HH----HHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC--------CT---
T ss_pred -HH----HHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc--------hh---
Confidence 00 13455556666654 3468889999999999999999999 9999999999999876530 00
Q ss_pred CCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHH
Q 008274 485 PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIW 564 (571)
Q Consensus 485 ~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 564 (571)
+ .. .....+++|+|+++|++|..++++.++.+.+.+.+.+.++++++++ ++|.+. .+..+.+.
T Consensus 148 ~----~~-------~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~~~~~ 210 (218)
T 1auo_A 148 E----LE-------LSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL-----PQEIHDIG 210 (218)
T ss_dssp T----CC-------CCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCC-----HHHHHHHH
T ss_pred h----hh-------hhhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccC-----HHHHHHHH
Confidence 0 00 0124567899999999999999999999999999888899999999 999873 23457788
Q ss_pred HHHHHhC
Q 008274 565 EFIERTL 571 (571)
Q Consensus 565 ~fl~~~l 571 (571)
+||.++|
T Consensus 211 ~~l~~~l 217 (218)
T 1auo_A 211 AWLAARL 217 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988764
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=173.19 Aligned_cols=179 Identities=13% Similarity=0.002 Sum_probs=133.1
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCC-------------CCCCChhh-h-HHHHhccCCC
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR-------------GTARRGLK-F-EASIKHNCGR 411 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r-------------G~~~~~~~-~-~~~~~~~~~~ 411 (571)
++.| ||++||.+++.. .+..+++.|+ .|+.|+++|.+ |++..+.. . .....
T Consensus 15 ~~~p-vv~lHG~g~~~~-------~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~----- 80 (209)
T 3og9_A 15 DLAP-LLLLHSTGGDEH-------QLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLD----- 80 (209)
T ss_dssp TSCC-EEEECCTTCCTT-------TTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHH-----
T ss_pred CCCC-EEEEeCCCCCHH-------HHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHH-----
Confidence 4668 999999766532 2344566666 79999999944 43322111 0 00111
Q ss_pred CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhh
Q 008274 412 IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVG 491 (571)
Q Consensus 412 ~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 491 (571)
...+++.+.++.+.++..+|.++++|+|||+||.+++.++.++|++++++++.+|......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------- 141 (209)
T 3og9_A 81 EETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF------------------- 141 (209)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC-------------------
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc-------------------
Confidence 1245566777777666667889999999999999999999999999999999988653210
Q ss_pred hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 492 YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 492 ~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.......++|+|++||++|.++|+++++++++.|++.+.++++.+++ ++|.+. .+..+.+.+||+++
T Consensus 142 ------~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~-----~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 142 ------EQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLT-----QEEVLAAKKWLTET 208 (209)
T ss_dssp ------CCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCC-----HHHHHHHHHHHHHH
T ss_pred ------cccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCC-----HHHHHHHHHHHHhh
Confidence 00123456899999999999999999999999999999999999998 699883 34567889999874
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-20 Score=181.95 Aligned_cols=232 Identities=17% Similarity=0.172 Sum_probs=155.1
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+.+.+.. +|..+...++.+... .++.|+||++||.+++.. .|..++..|+++||.|+++|+||+|.+
T Consensus 19 ~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~p~vv~~hG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~G~G~s 87 (315)
T 4f0j_A 19 PVHYLDFTS-QGQPLSMAYLDVAPK---KANGRTILLMHGKNFCAG-------TWERTIDVLADAGYRVIAVDQVGFCKS 87 (315)
T ss_dssp CCEEEEEEE-TTEEEEEEEEEECCS---SCCSCEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred cceeEEEec-CCCCeeEEEeecCCC---CCCCCeEEEEcCCCCcch-------HHHHHHHHHHHCCCeEEEeecCCCCCC
Confidence 456677766 555555554443321 145689999999877643 355678899999999999999999877
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc------
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD------ 471 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~------ 471 (571)
.... ......+++.+.+..+++.- +.++++|+|||+||.+++.++.++|++++++++.+|.....
T Consensus 88 ~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 158 (315)
T 4f0j_A 88 SKPA-------HYQYSFQQLAANTHALLERL--GVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGV 158 (315)
T ss_dssp CCCS-------SCCCCHHHHHHHHHHHHHHT--TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTC
T ss_pred CCCC-------ccccCHHHHHHHHHHHHHHh--CCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccc
Confidence 5321 12334667777777766653 45689999999999999999999999999999998864210
Q ss_pred ---cccchh---------------hhhhcCCCCC-Ch---------------------------hhhccCCcchhhccCC
Q 008274 472 ---GYDTFY---------------TEKYMGLPSE-DP---------------------------VGYEYSSVMHHVHKMK 505 (571)
Q Consensus 472 ---~~~~~~---------------~~~~~g~~~~-~~---------------------------~~~~~~s~~~~~~~~~ 505 (571)
...... ...+...... .. ......+....+.+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (315)
T 4f0j_A 159 PWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQ 238 (315)
T ss_dssp CCCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCC
T ss_pred hhhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCC
Confidence 000000 0000000000 00 0011123344578889
Q ss_pred CcEEEEecCCCCCCChHHH------------HHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 506 GKLLLVHGMIDENVHFRHT------------ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~------------~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+|+|+++|++|..++.... ....+.+.+...++++++++++||.+ ..++...+.+.+.+||+++
T Consensus 239 ~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 239 MPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTP-QIQAPERFHQALLEGLQTQ 314 (315)
T ss_dssp SCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCH-HHHSHHHHHHHHHHHHCC-
T ss_pred CCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcch-hhhCHHHHHHHHHHHhccC
Confidence 9999999999999994333 34444455555789999999999986 3456788999999999753
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-21 Score=184.70 Aligned_cols=201 Identities=16% Similarity=0.140 Sum_probs=143.6
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHH----HhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYL----RSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAE 422 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l----~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 422 (571)
++.|+||++|||++...... ...|..+++.| ++.||.|+++|+|+++..... ..++|+.++++
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~--~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~~-----------~~~~d~~~~~~ 105 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENT--PNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNP-----------RNLYDAVSNIT 105 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCC--GGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTT-----------HHHHHHHHHHH
T ss_pred CCCeEEEEECCCcccCCcCC--hHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCCC-----------cHHHHHHHHHH
Confidence 56799999999774421000 12345567777 689999999999987543211 12678899999
Q ss_pred HHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-----------------CCeeEEEEEcCccCCcccccc------hhhh
Q 008274 423 WLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-----------------PDVFQCAVSGAPVTSWDGYDT------FYTE 479 (571)
Q Consensus 423 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-----------------~~~~~~~v~~~~~~~~~~~~~------~~~~ 479 (571)
++.++ ++.++++|+|||+||.+++.++.++ |++++++++.+|+.+...... .+..
T Consensus 106 ~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
T 1vkh_A 106 RLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTR 183 (273)
T ss_dssp HHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHH
T ss_pred HHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccHHHHHH
Confidence 99876 3678999999999999999999885 788999999999876532211 1111
Q ss_pred hhcCCCCCChhhhc----cCCcch--hhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCC
Q 008274 480 KYMGLPSEDPVGYE----YSSVMH--HVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH 553 (571)
Q Consensus 480 ~~~g~~~~~~~~~~----~~s~~~--~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 553 (571)
..++. ..+.+. ..++.. ....+++|+|++||++|..+|++++..+++++++.+.++++.++++++|.+..
T Consensus 184 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~- 259 (273)
T 1vkh_A 184 LAFPD---GIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVY- 259 (273)
T ss_dssp HHCTT---CGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGG-
T ss_pred HHhcc---cccchhhcccccChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccc-
Confidence 12211 111111 111111 22337889999999999999999999999999999999999999999998743
Q ss_pred CcHHHHHHHHHHHH
Q 008274 554 RDRIYMEERIWEFI 567 (571)
Q Consensus 554 ~~~~~~~~~i~~fl 567 (571)
+. ..+.+.+.+||
T Consensus 260 ~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 260 KN-GKVAKYIFDNI 272 (273)
T ss_dssp GC-HHHHHHHHHTC
T ss_pred cC-hHHHHHHHHHc
Confidence 33 67778888775
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=189.18 Aligned_cols=244 Identities=16% Similarity=0.142 Sum_probs=161.6
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCC-CCCCceEEEEEcCCCCceeeccccccc--chhhhHHHHhCCcEEEEECCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRY-GPPPYKTLISVYGGPCVQLVCDSWINT--VDMRAQYLRSKGILVWKLDNRGT 394 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~-~~~~~P~vv~~hGg~~~~~~~~~~~~~--~~~~~~~l~~~G~~v~~~d~rG~ 394 (571)
..+.+.++..||..+.++.+.|..... ..++.|+||++||.+++.. .|... +..++..|+++||.|+++|+||+
T Consensus 26 ~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~---~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~ 102 (377)
T 1k8q_A 26 PAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT---NWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp CCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG---GGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred CceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchh---hhhcCCCcccHHHHHHHCCCCEEEecCCCC
Confidence 568888999999999998887654210 0125689999999877643 34322 23346689999999999999999
Q ss_pred CCChhhhHH-HHhccCCCCC----ch-hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC---eeEEEEEcC
Q 008274 395 ARRGLKFEA-SIKHNCGRID----AE-DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD---VFQCAVSGA 465 (571)
Q Consensus 395 ~~~~~~~~~-~~~~~~~~~~----~~-D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~---~~~~~v~~~ 465 (571)
|.+...... .......... .+ |+.++++++.++. +.++++++||||||.+++.++.++|+ +++++|+.+
T Consensus 103 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~ 180 (377)
T 1k8q_A 103 TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALA 180 (377)
T ss_dssp TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEES
T ss_pred CCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeC
Confidence 877531000 0000000111 33 7777888877652 34689999999999999999999998 799999988
Q ss_pred ccCCcccccchh----------hhhhc-------------------------------------CC--------------
Q 008274 466 PVTSWDGYDTFY----------TEKYM-------------------------------------GL-------------- 484 (571)
Q Consensus 466 ~~~~~~~~~~~~----------~~~~~-------------------------------------g~-------------- 484 (571)
|...+......+ ....+ +.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (377)
T 1k8q_A 181 PVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYL 260 (377)
T ss_dssp CCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHH
T ss_pred CchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHh
Confidence 865432110000 00000 00
Q ss_pred ---CCC----------------------------ChhhhccC-CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHH
Q 008274 485 ---PSE----------------------------DPVGYEYS-SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALV 532 (571)
Q Consensus 485 ---~~~----------------------------~~~~~~~~-s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~ 532 (571)
+.. +...+... .+...+.++++|+|+++|++|..++++.+..+++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~- 339 (377)
T 1k8q_A 261 SHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKL- 339 (377)
T ss_dssp TTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTC-
T ss_pred ccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhC-
Confidence 000 00000000 112237788999999999999999999988887765
Q ss_pred HcCCCee-EEEcCCCCCCCCC--CCcHHHHHHHHHHHHHHh
Q 008274 533 AARKPYE-ILIFPDERHMPRR--HRDRIYMEERIWEFIERT 570 (571)
Q Consensus 533 ~~~~~~~-~~~~~~~~H~~~~--~~~~~~~~~~i~~fl~~~ 570 (571)
.+.+ +++++++||.... .+....+.+.|.+||+++
T Consensus 340 ---~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 340 ---PNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp ---TTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred ---cCcccEEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 3344 8899999998632 467888999999999864
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.9e-21 Score=182.13 Aligned_cols=189 Identities=16% Similarity=0.040 Sum_probs=134.1
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHh--CCcEEEEECCCC---CCCChhhhHH--HHhccC-------CCC
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS--KGILVWKLDNRG---TARRGLKFEA--SIKHNC-------GRI 412 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rG---~~~~~~~~~~--~~~~~~-------~~~ 412 (571)
++.|+||++||.+.+.. . +..+++.|+. .++.++.|+-+. ..+.|..|.. ...... -..
T Consensus 64 ~~~plVI~LHG~G~~~~---~----~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~ 136 (285)
T 4fhz_A 64 EATSLVVFLHGYGADGA---D----LLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAA 136 (285)
T ss_dssp CCSEEEEEECCTTBCHH---H----HHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCCHH---H----HHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHH
Confidence 67899999999654422 2 2334566665 389999998542 1111221100 000000 000
Q ss_pred CchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhh
Q 008274 413 DAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGY 492 (571)
Q Consensus 413 ~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 492 (571)
...++.+.++.+.++..+|++||+|+|+|+||.+++.+++++|+.|+++++.++.... .+.
T Consensus 137 ~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~------------------~~~- 197 (285)
T 4fhz_A 137 AARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA------------------PER- 197 (285)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC------------------HHH-
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC------------------chh-
Confidence 1345666677777766789999999999999999999999999999999998764311 000
Q ss_pred ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 493 EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 493 ~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.....+.++|+|++||++|.+||++.+++++++|+++|.++++++|++.||++. .+..+.+.+||+++|
T Consensus 198 -----~~~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~-----~~~l~~~~~fL~~~L 266 (285)
T 4fhz_A 198 -----LAEEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA-----PDGLSVALAFLKERL 266 (285)
T ss_dssp -----HHHHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HHHHHHHHHHHHHHC
T ss_pred -----hhhhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-----HHHHHHHHHHHHHHC
Confidence 011223467999999999999999999999999999999999999999999983 234678899999886
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=185.90 Aligned_cols=213 Identities=10% Similarity=-0.039 Sum_probs=147.9
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCCCChhhhHHHHhccCC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTARRGLKFEASIKHNCG 410 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~ 410 (571)
+.++++.|.+ ++.|+||++|||+....... .+..++..|+ +.||.|+++|+||++..... .
T Consensus 84 ~~~~~~~p~~-----~~~p~vv~lHGgg~~~~~~~----~~~~~~~~la~~~g~~vi~~D~r~~~~~~~~--~------- 145 (326)
T 3d7r_A 84 MQVFRFNFRH-----QIDKKILYIHGGFNALQPSP----FHWRLLDKITLSTLYEVVLPIYPKTPEFHID--D------- 145 (326)
T ss_dssp EEEEEEESTT-----CCSSEEEEECCSTTTSCCCH----HHHHHHHHHHHHHCSEEEEECCCCTTTSCHH--H-------
T ss_pred EEEEEEeeCC-----CCCeEEEEECCCcccCCCCH----HHHHHHHHHHHHhCCEEEEEeCCCCCCCCch--H-------
Confidence 6677788864 35689999999874322111 2333456666 56999999999987653311 1
Q ss_pred CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCe----eEEEEEcCccCCcccccchhh--------
Q 008274 411 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDV----FQCAVSGAPVTSWDGYDTFYT-------- 478 (571)
Q Consensus 411 ~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~-------- 478 (571)
.++|+.++++++.++ ++.++++|+|||+||.+++.++.++|+. ++++|+.+|+.+.......+.
T Consensus 146 --~~~d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 221 (326)
T 3d7r_A 146 --TFQAIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDA 221 (326)
T ss_dssp --HHHHHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHHCS
T ss_pred --HHHHHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhcccCc
Confidence 167889999999877 5788999999999999999999887665 899999999876532211111
Q ss_pred -----------hhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCC
Q 008274 479 -----------EKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDER 547 (571)
Q Consensus 479 -----------~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 547 (571)
..+.+... ......+|+...-...+|+|+++|++|. ...++..+.+++.+.+.+++++++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~lii~G~~D~--~~~~~~~~~~~l~~~~~~~~~~~~~g~~ 296 (326)
T 3d7r_A 222 VLSQFGVNEIMKKWANGLP---LTDKRISPINGTIEGLPPVYMFGGGREM--THPDMKLFEQMMLQHHQYIEFYDYPKMV 296 (326)
T ss_dssp SCCHHHHHHHHHHHHTTSC---TTSTTTSGGGSCCTTCCCEEEEEETTST--THHHHHHHHHHHHHTTCCEEEEEETTCC
T ss_pred ccCHHHHHHHHHHhcCCCC---CCCCeECcccCCcccCCCEEEEEeCccc--chHHHHHHHHHHHHCCCcEEEEEeCCCc
Confidence 11111100 0001122322111112599999999996 4557788999999999999999999999
Q ss_pred CCCCC--CCcHHHHHHHHHHHHHHhC
Q 008274 548 HMPRR--HRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 548 H~~~~--~~~~~~~~~~i~~fl~~~l 571 (571)
|.+.. .+....+.+.+.+||++++
T Consensus 297 H~~~~~~~~~~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 297 HDFPIYPIRQSHKAIKQIAKSIDEDV 322 (326)
T ss_dssp TTGGGSSSHHHHHHHHHHHHHHTSCC
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHh
Confidence 98743 3567788999999998764
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.6e-20 Score=170.59 Aligned_cols=183 Identities=14% Similarity=0.038 Sum_probs=135.1
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHh--CCcEEEEECCCCC-------------------CCChhhhHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS--KGILVWKLDNRGT-------------------ARRGLKFEASI 405 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rG~-------------------~~~~~~~~~~~ 405 (571)
++.|+||++||++++.. .+..++..|++ +||.|+++|+||. +.+........
T Consensus 22 ~~~~~vv~lHG~~~~~~-------~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~ 94 (226)
T 3cn9_A 22 NADACIIWLHGLGADRT-------DFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQL 94 (226)
T ss_dssp TCCEEEEEECCTTCCGG-------GGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHH
T ss_pred CCCCEEEEEecCCCChH-------HHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhH
Confidence 57799999999876533 24556788887 9999999988742 21110000000
Q ss_pred hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh-cCCCeeEEEEEcCccCCcccccchhhhhhcCC
Q 008274 406 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA-RFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGL 484 (571)
Q Consensus 406 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 484 (571)
.. ..+++.++++.+.+ ..++.++++|+|||+||.+++.++. ++|++++++++.+|..+... .+
T Consensus 95 -~~----~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~-------~~--- 158 (226)
T 3cn9_A 95 -NA----SADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFD-------DL--- 158 (226)
T ss_dssp -HH----HHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGG-------GC---
T ss_pred -HH----HHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCch-------hh---
Confidence 00 13444555555544 3467789999999999999999999 99999999999998754311 00
Q ss_pred CCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHH
Q 008274 485 PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIW 564 (571)
Q Consensus 485 ~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 564 (571)
.. ...++++|+|+++|++|..++++.+..+++.+.+.+.++++++++ ++|.+. .+..+.+.
T Consensus 159 ---------~~----~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~~~i~ 219 (226)
T 3cn9_A 159 ---------AL----DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVS-----LEEIHDIG 219 (226)
T ss_dssp ---------CC----CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCC-----HHHHHHHH
T ss_pred ---------hh----cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcc-----hhhHHHHH
Confidence 00 124567899999999999999999999999999988899999999 999872 23457899
Q ss_pred HHHHHhC
Q 008274 565 EFIERTL 571 (571)
Q Consensus 565 ~fl~~~l 571 (571)
+||+++|
T Consensus 220 ~~l~~~l 226 (226)
T 3cn9_A 220 AWLRKRL 226 (226)
T ss_dssp HHHHHHC
T ss_pred HHHHhhC
Confidence 9999876
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-20 Score=181.08 Aligned_cols=225 Identities=12% Similarity=0.079 Sum_probs=148.9
Q ss_pred EEEEE---cCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 321 IVQIQ---ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 321 ~~~~~---~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
.+++. ..++..+.+++|.|.+.. ++.|+||++||+++... .| +..+++.++++||.|+++|+|+.+..
T Consensus 26 ~~~~~~~~~~~~~~l~~~~~~P~~~~---~~~p~vv~lHG~~~~~~---~~---~~~~~~~l~~~g~~v~~~d~~~~~~p 96 (304)
T 3d0k_A 26 AIPYLDDDRNADRPFTLNTYRPYGYT---PDRPVVVVQHGVLRNGA---DY---RDFWIPAADRHKLLIVAPTFSDEIWP 96 (304)
T ss_dssp EEEECC---CTTCCEEEEEEECTTCC---TTSCEEEEECCTTCCHH---HH---HHHTHHHHHHHTCEEEEEECCTTTSC
T ss_pred eEEecccCCCCCceEEEEEEeCCCCC---CCCcEEEEeCCCCCCHH---HH---HHHHHHHHHHCCcEEEEeCCccccCC
Confidence 35555 567888999999997632 46799999999877643 22 13457788899999999999954221
Q ss_pred hhhhHHHH--------hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-eeEEEEEc-Ccc
Q 008274 398 GLKFEASI--------KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSG-APV 467 (571)
Q Consensus 398 ~~~~~~~~--------~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-~~~~~v~~-~~~ 467 (571)
+..+.... ........+.|+.++++++.++..+|.++|+|+|||+||.+++.++.++|+ +++++|+. +|.
T Consensus 97 ~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~ 176 (304)
T 3d0k_A 97 GVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGW 176 (304)
T ss_dssp HHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSS
T ss_pred CccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcc
Confidence 10000000 000112335789999999998877889999999999999999999999985 67777754 465
Q ss_pred CCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCC-----------------hHHHHHHHHH
Q 008274 468 TSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVH-----------------FRHTARLINA 530 (571)
Q Consensus 468 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~-----------------~~~~~~~~~~ 530 (571)
.++......+ ..+... ...++......+++|+|++||+.|..+. .+.+..+++.
T Consensus 177 ~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (304)
T 3d0k_A 177 YTLPTFEHRF---PEGLDG------VGLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYARARHYYEA 247 (304)
T ss_dssp CCCSSTTSBT---TTSSBT------TTCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHHHHHHHHH
T ss_pred cccCCccccC---ccccCC------CCCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccHHHHHHHHHHH
Confidence 5432211110 011110 0123444444557899999999999752 3455666776
Q ss_pred HH----HcCCC--eeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 531 LV----AARKP--YEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 531 l~----~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++ +.+.+ ++++++|+++|.+ ......+.+||.+
T Consensus 248 l~~~a~~~g~~~~~~~~~~pg~gH~~------~~~~~~~~~~~~~ 286 (304)
T 3d0k_A 248 GQRAAAQRGLPFGWQLQVVPGIGHDG------QAMSQVCASLWFD 286 (304)
T ss_dssp HHHHHHHHTCCCCCEEEEETTCCSCH------HHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCcceEEEEeCCCCCch------HHHHHHHHHHHhh
Confidence 65 66776 9999999999986 2344566776643
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.84 E-value=5.6e-20 Score=170.55 Aligned_cols=182 Identities=15% Similarity=0.120 Sum_probs=138.6
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEE--CCCCCCCChhh-------hHHHHhccCCCCCchhH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKL--DNRGTARRGLK-------FEASIKHNCGRIDAEDQ 417 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~--d~rG~~~~~~~-------~~~~~~~~~~~~~~~D~ 417 (571)
++.|+||++||.++... .+...++.|++ ||.|+++ |+||.|.+... +..... ..++.++
T Consensus 36 ~~~~~vv~~HG~~~~~~-------~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~----~~~~~~~ 103 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNEL-------DLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDL----IFRTKEL 103 (226)
T ss_dssp TTSCEEEEECCTTCCTT-------TTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHH----HHHHHHH
T ss_pred CCCcEEEEEecCCCChh-------HHHHHHHHhcc-CceEEEecCcccCCcchhhccccCccCcChhhH----HHHHHHH
Confidence 36799999999876532 34556777877 9999999 88887754210 000000 0014456
Q ss_pred HHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCc
Q 008274 418 LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSV 497 (571)
Q Consensus 418 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~ 497 (571)
.+.++++.++..++.++++++|||+||.+++.++.++|++++++++.+|......
T Consensus 104 ~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------------- 158 (226)
T 2h1i_A 104 NEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG------------------------- 158 (226)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-------------------------
T ss_pred HHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc-------------------------
Confidence 6677777777667889999999999999999999999999999999998754311
Q ss_pred chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 498 MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 498 ~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
......+++|+|+++|++|..++.+.+..+++.+.+.+.++++ ++++++|.+. .+..+.+.+||+++|
T Consensus 159 ~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 159 MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLT-----MGEVEKAKEWYDKAF 226 (226)
T ss_dssp CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCC-----HHHHHHHHHHHHHHC
T ss_pred cccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC-----HHHHHHHHHHHHHhC
Confidence 0112234689999999999999999999999999988888888 9999999872 345688999999875
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.84 E-value=8.7e-21 Score=181.30 Aligned_cols=217 Identities=22% Similarity=0.255 Sum_probs=139.1
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
.+...||..+++..+.. . |.||++||.+++.. .|...+..|+++||.|+++|+||+|.+.....
T Consensus 2 ~~~~~~g~~l~y~~~G~--------g-~~vvllHG~~~~~~-------~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~ 65 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWGS--------G-KPVLFSHGWLLDAD-------MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT 65 (271)
T ss_dssp EEECTTSCEEEEEEESS--------S-SEEEEECCTTCCGG-------GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSS
T ss_pred eEEcCCCCEEEEEccCC--------C-CeEEEECCCCCcHH-------HHHHHHHHHHhCCceEEEecCCCCccCCCCCC
Confidence 35677898888776531 1 35778999876543 34556788889999999999999998753211
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc-CCCeeEEEEEcCccCCcccc--------
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR-FPDVFQCAVSGAPVTSWDGY-------- 473 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~~v~~~~~~~~~~~-------- 473 (571)
...... ..+|+.+.++.+ +.+++.|+||||||.+++.++++ .|++++++++.++.......
T Consensus 66 ~~~~~~----~a~d~~~~l~~l------~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 135 (271)
T 3ia2_A 66 GNDYDT----FADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGV 135 (271)
T ss_dssp CCSHHH----HHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSB
T ss_pred CCCHHH----HHHHHHHHHHHh------CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccc
Confidence 000000 133444444444 45689999999999977766655 48999999987764321100
Q ss_pred c-ch------------------hhhhhcCCC---CCCh----------------------hhhccCCcchhhccCCCcEE
Q 008274 474 D-TF------------------YTEKYMGLP---SEDP----------------------VGYEYSSVMHHVHKMKGKLL 509 (571)
Q Consensus 474 ~-~~------------------~~~~~~g~~---~~~~----------------------~~~~~~s~~~~~~~~~~p~l 509 (571)
. .. +...+.+.. .... ..+...+....+.++++|+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~L 215 (271)
T 3ia2_A 136 PLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTL 215 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEE
T ss_pred cHHHHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEE
Confidence 0 00 000000000 0000 00111122234677899999
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 510 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 510 li~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+++|++|..+|++.+.++.+.+ -.+.++.++|++||.+ ..++...+.+.+.+||++
T Consensus 216 vi~G~~D~~~p~~~~~~~~~~~---~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 216 VIHGDGDQIVPFETTGKVAAEL---IKGAELKVYKDAPHGF-AVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp EEEETTCSSSCGGGTHHHHHHH---STTCEEEEETTCCTTH-HHHTHHHHHHHHHHHHTC
T ss_pred EEEeCCCCcCChHHHHHHHHHh---CCCceEEEEcCCCCcc-cccCHHHHHHHHHHHhhC
Confidence 9999999999998765555444 3568999999999987 446678899999999863
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.84 E-value=5.9e-20 Score=175.87 Aligned_cols=218 Identities=17% Similarity=0.174 Sum_probs=140.7
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHH
Q 008274 324 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA 403 (571)
Q Consensus 324 ~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~ 403 (571)
++..+|..+++..+.|.. .|.||++||.+.+.. .|...+..|+++||.|+++|+||+|.+....
T Consensus 3 ~~~~~g~~l~y~~~g~~~-------~~~vvllHG~~~~~~-------~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-- 66 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPRD-------GLPVVFHHGWPLSAD-------DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPS-- 66 (275)
T ss_dssp EECTTSCEEEEEEESCTT-------SCEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--
T ss_pred EEccCCCEEEEEEcCCCC-------CceEEEECCCCCchh-------hHHHHHHHHHHCCceEEEEcCCcCCCCCCCC--
Confidence 556788888877775532 257888999766533 3455678899999999999999999875321
Q ss_pred HHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-CCeeEEEEEcCccCCccc--------cc
Q 008274 404 SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWDG--------YD 474 (571)
Q Consensus 404 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-~~~~~~~v~~~~~~~~~~--------~~ 474 (571)
....++++.+.+..+.+.- +.+++.++||||||.+++.+++++ |++++++|+.++...... ..
T Consensus 67 ------~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 138 (275)
T 1a88_A 67 ------TGHDMDTYAADVAALTEAL--DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLP 138 (275)
T ss_dssp ------SCCSHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBC
T ss_pred ------CCCCHHHHHHHHHHHHHHc--CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCC
Confidence 1122333333333333321 346899999999999999877776 999999998876432100 00
Q ss_pred -ch---------------hhh----hhcCCC--C--CChh---h-------------------hccCCcchhhccCCCcE
Q 008274 475 -TF---------------YTE----KYMGLP--S--EDPV---G-------------------YEYSSVMHHVHKMKGKL 508 (571)
Q Consensus 475 -~~---------------~~~----~~~g~~--~--~~~~---~-------------------~~~~s~~~~~~~~~~p~ 508 (571)
.. +.. .+.+.. . ...+ . +...+....+.++++|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 218 (275)
T 1a88_A 139 LEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPV 218 (275)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCE
T ss_pred HHHHHHHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCE
Confidence 00 000 011100 0 0000 0 00112223456789999
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 509 LLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 509 lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
|+++|++|..+++....+....+ ..+.++++++++||.+. .++.+.+.+.+.+||++
T Consensus 219 lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 219 LVAHGTDDQVVPYADAAPKSAEL---LANATLKSYEGLPHGML-STHPEVLNPDLLAFVKS 275 (275)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHH---STTEEEEEETTCCTTHH-HHCHHHHHHHHHHHHHC
T ss_pred EEEecCCCccCCcHHHHHHHHhh---CCCcEEEEcCCCCccHH-HhCHHHHHHHHHHHhhC
Confidence 99999999999987544433332 35789999999999873 45688899999999863
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-20 Score=176.87 Aligned_cols=213 Identities=19% Similarity=0.239 Sum_probs=140.2
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHH
Q 008274 324 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA 403 (571)
Q Consensus 324 ~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~ 403 (571)
+...+|..+++..+.|+. .|.||++||.+.+.. .|...+..|+++||.|+++|+||+|.+....
T Consensus 4 ~~~~~g~~l~y~~~g~~~-------~~~vvllHG~~~~~~-------~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~-- 67 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPRD-------APVIHFHHGWPLSAD-------DWDAQLLFFLAHGYRVVAHDRRGHGRSSQVW-- 67 (276)
T ss_dssp EECTTSCEEEEEEESCTT-------SCEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--
T ss_pred EECCCCcEEEEEecCCCC-------CCeEEEECCCCcchh-------HHHHHHHHHHhCCCEEEEecCCCCCCCCCCC--
Confidence 456688888887775532 257889999876543 3455678899999999999999999875321
Q ss_pred HHhccCCCCCc----hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-CCeeEEEEEcCccCCcc-------
Q 008274 404 SIKHNCGRIDA----EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWD------- 471 (571)
Q Consensus 404 ~~~~~~~~~~~----~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-~~~~~~~v~~~~~~~~~------- 471 (571)
....+ +|+.+.++.+ +.+++.|+||||||.+++.+++++ |++++++|+.++.....
T Consensus 68 ------~~~~~~~~~~d~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~ 135 (276)
T 1zoi_A 68 ------DGHDMDHYADDVAAVVAHL------GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNP 135 (276)
T ss_dssp ------SCCSHHHHHHHHHHHHHHH------TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCT
T ss_pred ------CCCCHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCcccccccccc
Confidence 11223 3444444444 346899999999999999988777 99999999887643210
Q ss_pred -c-----ccc-----------hhh---h-hhcCCC--C--CChh---hh-------------------ccCCcchhhccC
Q 008274 472 -G-----YDT-----------FYT---E-KYMGLP--S--EDPV---GY-------------------EYSSVMHHVHKM 504 (571)
Q Consensus 472 -~-----~~~-----------~~~---~-~~~g~~--~--~~~~---~~-------------------~~~s~~~~~~~~ 504 (571)
. ... .+. . .+.+.. . ...+ .+ ...+....+.++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 215 (276)
T 1zoi_A 136 GGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGI 215 (276)
T ss_dssp TSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHC
T ss_pred ccccHHHHHHHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhcccc
Confidence 0 000 000 0 011100 0 0000 00 011223346678
Q ss_pred CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 505 ~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
++|+|+++|++|..+|+....+....+ -.+.+++++|++||.+. .++...+.+.+.+||+
T Consensus 216 ~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 216 QQPVLVMHGDDDQIVPYENSGVLSAKL---LPNGALKTYKGYPHGMP-TTHADVINADLLAFIR 275 (276)
T ss_dssp CSCEEEEEETTCSSSCSTTTHHHHHHH---STTEEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCcccChHHHHHHHHhh---CCCceEEEcCCCCCchh-hhCHHHHHHHHHHHhc
Confidence 999999999999999987444333332 35789999999999873 4567889999999985
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-19 Score=176.40 Aligned_cols=241 Identities=12% Similarity=0.043 Sum_probs=158.7
Q ss_pred CCCeEEEEEcCC-CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC
Q 008274 317 EPPDIVQIQAND-GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 317 ~~~~~~~~~~~d-g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
...+.+++.+.. +..+.++ +.|.. +++|+||++||++.... ...|... ....+.+++.|++|+++|.++++
T Consensus 7 ~~v~~~~~~S~~~~~~i~v~-~~p~~-----~~~p~vvllHG~~~~~~-~~~w~~~-~~~~~~~~~~~~~vv~p~~~~~~ 78 (304)
T 1sfr_A 7 LPVEYLQVPSPSMGRDIKVQ-FQSGG-----ANSPALYLLDGLRAQDD-FSGWDIN-TPAFEWYDQSGLSVVMPVGGQSS 78 (304)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS-----TTBCEEEEECCTTCCSS-SCHHHHH-CCHHHHHTTSSCEEEEECCCTTC
T ss_pred ceEEEEEEECccCCCceEEE-ECCCC-----CCCCEEEEeCCCCCCCC-cchhhcC-CCHHHHHhcCCeEEEEECCCCCc
Confidence 456778887754 5677776 55543 57899999999843111 1233211 11246677889999999998753
Q ss_pred CChhhhHHH--HhccCCCCCchhH--HHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc
Q 008274 396 RRGLKFEAS--IKHNCGRIDAEDQ--LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 471 (571)
Q Consensus 396 ~~~~~~~~~--~~~~~~~~~~~D~--~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~ 471 (571)
.+.. +... .....+.....+. .+.+.++.++..++.++++|+|+||||++|+.+++++|++|+++++.+|..++.
T Consensus 79 ~~~~-~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 157 (304)
T 1sfr_A 79 FYSD-WYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPS 157 (304)
T ss_dssp TTCB-CSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTT
T ss_pred cccc-cCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcc
Confidence 3211 0000 0000001122332 234444444334677799999999999999999999999999999999987654
Q ss_pred ccc--ch-----------hhhhhcCCCCCChhhhccCCcchhhccC---CCcEEEEecCCCC--------------CCCh
Q 008274 472 GYD--TF-----------YTEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDE--------------NVHF 521 (571)
Q Consensus 472 ~~~--~~-----------~~~~~~g~~~~~~~~~~~~s~~~~~~~~---~~p~lli~G~~D~--------------~v~~ 521 (571)
... .. ..+..+|.+. .+.+...+|...+.++ .+|++|++|+.|. .++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~ 235 (304)
T 1sfr_A 158 QAMGPTLIGLAMGDAGGYKASDMWGPKE--DPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVR 235 (304)
T ss_dssp STTHHHHHHHHHHHTTSCCHHHHHCSTT--STHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHH
T ss_pred ccchhhhhhHhhhhccccchHHhcCCcc--hhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHH
Confidence 321 00 0112223332 2456667777666666 5899999999998 6788
Q ss_pred HHHHHHHHHHHHcC-CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 522 RHTARLINALVAAR-KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 522 ~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
..+++++++|+++| .++++.+|++++|.+. ........++.||.++|
T Consensus 236 ~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l 283 (304)
T 1sfr_A 236 TSNIKFQDAYNAGGGHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRAL 283 (304)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCceEEEecCCCccCHH---HHHHHHHHHHHHHHHhc
Confidence 99999999999999 9999999987899862 23445567788887653
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-19 Score=169.23 Aligned_cols=192 Identities=14% Similarity=-0.014 Sum_probs=132.3
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhC-----CcEEEEECCCCCCC------ChhhhHH-HHhccCCC---
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK-----GILVWKLDNRGTAR------RGLKFEA-SIKHNCGR--- 411 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~-----G~~v~~~d~rG~~~------~~~~~~~-~~~~~~~~--- 411 (571)
++.|+||++||.+++.. .+..++..|+.+ |+.|+.+|.++... .+..|.. ........
T Consensus 21 ~~~p~vv~lHG~g~~~~-------~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 93 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQ-------GLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHL 93 (239)
T ss_dssp CCCEEEEEECCTTCCHH-------HHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCH
T ss_pred CCCcEEEEEecCCCchh-------hHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccch
Confidence 56799999999776543 233456666654 79999999875311 1111100 00000000
Q ss_pred CCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCC
Q 008274 412 IDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSED 488 (571)
Q Consensus 412 ~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~ 488 (571)
..+.++.+.+..+++. ..++.++++|+|||+||.+++.++.++|++++++++.+|..+......
T Consensus 94 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~------------- 160 (239)
T 3u0v_A 94 ESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVY------------- 160 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHH-------------
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHH-------------
Confidence 0123333334433332 446889999999999999999999999999999999998765321100
Q ss_pred hhhhccCCcchhhccCCCc-EEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 489 PVGYEYSSVMHHVHKMKGK-LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 489 ~~~~~~~s~~~~~~~~~~p-~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
.. ........| +|++||++|..++++.+..+++.|++.+.+++++++++++|.+. .+..+.+.+||
T Consensus 161 -~~-------~~~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l 227 (239)
T 3u0v_A 161 -QA-------LQKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS-----KTELDILKLWI 227 (239)
T ss_dssp -HH-------HHHCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HHHHHHHHHHH
T ss_pred -HH-------HHhhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC-----HHHHHHHHHHH
Confidence 00 002233456 99999999999999999999999999999999999999999984 45578889999
Q ss_pred HHhC
Q 008274 568 ERTL 571 (571)
Q Consensus 568 ~~~l 571 (571)
+++|
T Consensus 228 ~~~l 231 (239)
T 3u0v_A 228 LTKL 231 (239)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 8865
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=172.17 Aligned_cols=191 Identities=15% Similarity=0.044 Sum_probs=141.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchh--hhHHHHhCCcEEEEECCCCCCCChhhhHHHH
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDM--RAQYLRSKGILVWKLDNRGTARRGLKFEASI 405 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~--~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~ 405 (571)
+|.+++++.+.|.+. ++.|+||++||++++.. .|.. .++.|+++||.|+++|+||+|.+.....
T Consensus 15 ~g~~l~~~~~~p~~~----~~~~~vv~~hG~~~~~~-------~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~--- 80 (210)
T 1imj_A 15 QGQALFFREALPGSG----QARFSVLLLHGIRFSSE-------TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAA--- 80 (210)
T ss_dssp TTEEECEEEEECSSS----CCSCEEEECCCTTCCHH-------HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCC---
T ss_pred CCeEEEEEEeCCCCC----CCCceEEEECCCCCccc-------eeecchhHHHHHHCCCeEEEecCCCCCCCCCCCC---
Confidence 788999999988652 35689999999876643 2333 4788999999999999999876543221
Q ss_pred hccCCCCCc--hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcC
Q 008274 406 KHNCGRIDA--EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMG 483 (571)
Q Consensus 406 ~~~~~~~~~--~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g 483 (571)
.... .... +++.+.++.+ +.++++++|||+||.+++.++.++|++++++++.+|.....
T Consensus 81 ~~~~-~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------ 141 (210)
T 1imj_A 81 PAPI-GELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK------------ 141 (210)
T ss_dssp SSCT-TSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG------------
T ss_pred cchh-hhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc------------
Confidence 0111 1112 4555555554 44689999999999999999999999999999998864310
Q ss_pred CCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHH
Q 008274 484 LPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 563 (571)
Q Consensus 484 ~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i 563 (571)
.....+.++++|+|+++|++|. ++.+....+ +. -.+.++.++++++|.+ ..+....+.+.+
T Consensus 142 ------------~~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~----~~~~~~~~~~~~~H~~-~~~~~~~~~~~i 202 (210)
T 1imj_A 142 ------------INAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQ----LPNHRVLIMKGAGHPC-YLDKPEEWHTGL 202 (210)
T ss_dssp ------------SCHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TT----SSSEEEEEETTCCTTH-HHHCHHHHHHHH
T ss_pred ------------ccchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hh----CCCCCEEEecCCCcch-hhcCHHHHHHHH
Confidence 0123456788999999999999 988777666 43 3578999999999986 334467788999
Q ss_pred HHHHHHh
Q 008274 564 WEFIERT 570 (571)
Q Consensus 564 ~~fl~~~ 570 (571)
.+||++.
T Consensus 203 ~~fl~~~ 209 (210)
T 1imj_A 203 LDFLQGL 209 (210)
T ss_dssp HHHHHTC
T ss_pred HHHHHhc
Confidence 9999763
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-20 Score=170.80 Aligned_cols=198 Identities=14% Similarity=0.091 Sum_probs=139.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHH-h
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI-K 406 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~-~ 406 (571)
++..+...++.|.. .+.|+||++||.+++.. .|..+++.|++ ||.|+++|.++....+..+.... .
T Consensus 14 ~~~~l~~~~~~~~~-----~~~p~vv~lHG~g~~~~-------~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~ 80 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK-----ESRECLFLLHGSGVDET-------TLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDP 80 (223)
T ss_dssp CSSSSCEEEESTTS-----SCCCEEEEECCTTBCTT-------TTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEET
T ss_pred cCCCceEEEeCCCC-----CCCCEEEEEecCCCCHH-------HHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCC
Confidence 34456666665543 23489999999766532 23445667765 99999999876321111110000 0
Q ss_pred --cc--CCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhc
Q 008274 407 --HN--CGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYM 482 (571)
Q Consensus 407 --~~--~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 482 (571)
.. .-....+++.+.++++.++..+|.++++|+|||+||.+++.++.++|++++++++.+|......
T Consensus 81 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------- 150 (223)
T 3b5e_A 81 TRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH---------- 150 (223)
T ss_dssp TEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS----------
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc----------
Confidence 00 0001145667777777766557889999999999999999999999999999999988754210
Q ss_pred CCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHH
Q 008274 483 GLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEER 562 (571)
Q Consensus 483 g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 562 (571)
+ .....+++|+|++||++|..++++.++ +.+.+++.+.++++++++ ++|.+. .+..+.
T Consensus 151 --~-------------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~~~ 208 (223)
T 3b5e_A 151 --V-------------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIG-----DPDAAI 208 (223)
T ss_dssp --C-------------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCC-----HHHHHH
T ss_pred --c-------------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcC-----HHHHHH
Confidence 0 012345689999999999999999999 999999999999999999 999883 223467
Q ss_pred HHHHHHHh
Q 008274 563 IWEFIERT 570 (571)
Q Consensus 563 i~~fl~~~ 570 (571)
+.+||++.
T Consensus 209 i~~~l~~~ 216 (223)
T 3b5e_A 209 VRQWLAGP 216 (223)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHhh
Confidence 88998764
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-20 Score=173.93 Aligned_cols=184 Identities=14% Similarity=0.034 Sum_probs=134.0
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEE--CCCCCCCChhhhH-HHHhcc--CCCCCchhHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKL--DNRGTARRGLKFE-ASIKHN--CGRIDAEDQLTGA 421 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~--d~rG~~~~~~~~~-~~~~~~--~~~~~~~D~~~~~ 421 (571)
++.|+||++||++++.. .|...++.|++ +|.|+++ |++|+|++..... ...... ......+|+.+++
T Consensus 60 ~~~p~vv~~HG~~~~~~-------~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l 131 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN-------QFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFI 131 (251)
T ss_dssp TTSCEEEEECCTTCCHH-------HHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHh-------HHHHHHHhcCC-CceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHH
Confidence 46799999999876543 24445667766 5999999 7888876531000 000000 0001156677777
Q ss_pred HHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhh
Q 008274 422 EWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHV 501 (571)
Q Consensus 422 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~ 501 (571)
+++.++. +.++++|+|||+||.+++.++.++|++++++|+.+|..+... ....
T Consensus 132 ~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-------------------------~~~~ 184 (251)
T 2r8b_A 132 KANREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-------------------------KISP 184 (251)
T ss_dssp HHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-------------------------CCCC
T ss_pred HHHHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc-------------------------cccc
Confidence 7776654 678999999999999999999999999999999998765321 0112
Q ss_pred ccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 502 HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 502 ~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
..+++|+|+++|++|..++++.+..+++++.+.+.++++ .+++++|.+. .+..+.+.+||+++|
T Consensus 185 ~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l 248 (251)
T 2r8b_A 185 AKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVET-VWHPGGHEIR-----SGEIDAVRGFLAAYG 248 (251)
T ss_dssp CCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEE-EEESSCSSCC-----HHHHHHHHHHHGGGC
T ss_pred cccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEE-EecCCCCccC-----HHHHHHHHHHHHHhc
Confidence 345789999999999999999999999999887787777 6667899872 334578899998875
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.83 E-value=9.7e-20 Score=172.24 Aligned_cols=214 Identities=17% Similarity=0.173 Sum_probs=137.7
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|..+++..+.+ . .|.||++||.+++.. . .|...+..|+++||.|+++|+||+|.+.... .
T Consensus 10 ~g~~l~~~~~g~-------~-~~~vvllHG~~~~~~--~----~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-----~ 70 (254)
T 2ocg_A 10 NGVQLHYQQTGE-------G-DHAVLLLPGMLGSGE--T----DFGPQLKNLNKKLFTVVAWDPRGYGHSRPPD-----R 70 (254)
T ss_dssp TTEEEEEEEEEC-------C-SEEEEEECCTTCCHH--H----HCHHHHHHSCTTTEEEEEECCTTSTTCCSSC-----C
T ss_pred CCEEEEEEEecC-------C-CCeEEEECCCCCCCc--c----chHHHHHHHhhCCCeEEEECCCCCCCCCCCC-----C
Confidence 677777665532 1 257889999765411 1 2445678888899999999999998775321 0
Q ss_pred cCCCC-CchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc----------ch
Q 008274 408 NCGRI-DAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD----------TF 476 (571)
Q Consensus 408 ~~~~~-~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~----------~~ 476 (571)
.+... ...++..+++.+... +.+++.|+||||||.+++.++.++|++++++|+.++........ ..
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~l---~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 147 (254)
T 2ocg_A 71 DFPADFFERDAKDAVDLMKAL---KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSK 147 (254)
T ss_dssp CCCTTHHHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGG
T ss_pred CCChHHHHHHHHHHHHHHHHh---CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHH
Confidence 11000 012334444444443 34689999999999999999999999999999987643211000 00
Q ss_pred hhhh-------hcCCCC---------CChhhhc----cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCC
Q 008274 477 YTEK-------YMGLPS---------EDPVGYE----YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARK 536 (571)
Q Consensus 477 ~~~~-------~~g~~~---------~~~~~~~----~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~ 536 (571)
+... ..+... .....+. .......+.++++|+|+++|++|..+|++.+..+.+.+ .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~----~ 223 (254)
T 2ocg_A 148 WSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHV----K 223 (254)
T ss_dssp SCHHHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS----T
T ss_pred HHHHhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhC----C
Confidence 0000 000000 0000000 01123456788999999999999999999888777654 4
Q ss_pred CeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 537 PYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 537 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+.+++++|++||.+. .++.+.+.+.+.+||+
T Consensus 224 ~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 224 GSRLHLMPEGKHNLH-LRFADEFNKLAEDFLQ 254 (254)
T ss_dssp TCEEEEETTCCTTHH-HHTHHHHHHHHHHHHC
T ss_pred CCEEEEcCCCCCchh-hhCHHHHHHHHHHHhC
Confidence 578999999999873 3567888899999973
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.7e-20 Score=162.41 Aligned_cols=174 Identities=16% Similarity=0.018 Sum_probs=130.6
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
++.|+||++||.+++.. .| .+..+++.|+++||.|+++|+||.|.+.... ......+++.++++++.+
T Consensus 2 ~~~~~vv~~HG~~~~~~---~~--~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~-------~~~~~~~~~~~~~~~~~~ 69 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPD---AL--KVTALAEVAERLGWTHERPDFTDLDARRDLG-------QLGDVRGRLQRLLEIARA 69 (176)
T ss_dssp CSSCEEEEECCTTCCTT---SH--HHHHHHHHHHHTTCEEECCCCHHHHTCGGGC-------TTCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCcc---HH--HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHh
Confidence 45689999999765422 22 2335678899999999999999977654211 001112344555666655
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKG 506 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~ 506 (571)
.. +.++++++|||+||.+++.++.++| ++++++.+|......+. ...++++
T Consensus 70 ~~--~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~~-------------------------~~~~~~~ 120 (176)
T 2qjw_A 70 AT--EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPLP-------------------------ALDAAAV 120 (176)
T ss_dssp HH--TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTBC-------------------------CCCCCSS
T ss_pred cC--CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccccC-------------------------cccccCC
Confidence 43 4579999999999999999999988 89999988876532110 0456789
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 507 KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 507 p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
|+|+++|++|..++++.+..+++.+ +.+++++ +++|.+ .+....+.+.+.+||++
T Consensus 121 P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~-~~~H~~--~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 121 PISIVHAWHDELIPAADVIAWAQAR-----SARLLLV-DDGHRL--GAHVQAASRAFAELLQS 175 (176)
T ss_dssp CEEEEEETTCSSSCHHHHHHHHHHH-----TCEEEEE-SSCTTC--TTCHHHHHHHHHHHHHT
T ss_pred CEEEEEcCCCCccCHHHHHHHHHhC-----CceEEEe-CCCccc--cccHHHHHHHHHHHHHh
Confidence 9999999999999999999998876 4688888 899998 36788899999999975
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.83 E-value=8.7e-20 Score=174.51 Aligned_cols=216 Identities=19% Similarity=0.245 Sum_probs=139.1
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHH
Q 008274 324 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA 403 (571)
Q Consensus 324 ~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~ 403 (571)
++..+|..+++..+. +.|.||++||.+.+.. .|...+..|+++||.|+++|+||+|.+....
T Consensus 3 ~~~~~g~~l~y~~~g---------~~~~vvllHG~~~~~~-------~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~-- 64 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWG---------SGQPIVFSHGWPLNAD-------SWESQMIFLAAQGYRVIAHDRRGHGRSSQPW-- 64 (273)
T ss_dssp EECTTSCEEEEEEES---------CSSEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--
T ss_pred EecCCCcEEEEEEcC---------CCCEEEEECCCCCcHH-------HHhhHHhhHhhCCcEEEEECCCCCCCCCCCC--
Confidence 566788888766542 1256888999876533 3455678899999999999999999875321
Q ss_pred HHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-CCeeEEEEEcCccCCcc--------ccc
Q 008274 404 SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWD--------GYD 474 (571)
Q Consensus 404 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-~~~~~~~v~~~~~~~~~--------~~~ 474 (571)
....+++..+.+..+.+.- +.+++.|+||||||.+++.+++++ |++++++|+.++..... ...
T Consensus 65 ------~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 136 (273)
T 1a8s_A 65 ------SGNDMDTYADDLAQLIEHL--DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLP 136 (273)
T ss_dssp ------SCCSHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBC
T ss_pred ------CCCCHHHHHHHHHHHHHHh--CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCc
Confidence 1122344444444444332 456899999999999999877766 89999998877542110 000
Q ss_pred -ch---------------hhh----hhcCCC--C--CChh---h-------------------hccCCcchhhccCCCcE
Q 008274 475 -TF---------------YTE----KYMGLP--S--EDPV---G-------------------YEYSSVMHHVHKMKGKL 508 (571)
Q Consensus 475 -~~---------------~~~----~~~g~~--~--~~~~---~-------------------~~~~s~~~~~~~~~~p~ 508 (571)
.. +.. .+.+.. . ...+ . +...+....+.++++|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 216 (273)
T 1a8s_A 137 MEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPT 216 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCE
T ss_pred HHHHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCE
Confidence 00 000 011100 0 0000 0 01112233467889999
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 509 LLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 509 lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
|+++|++|..+|++...+....+ -.+.++++++++||.+ ..++.+.+.+.+.+||++
T Consensus 217 lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 217 LVVHGDADQVVPIEASGIASAAL---VKGSTLKIYSGAPHGL-TDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHH---STTCEEEEETTCCSCH-HHHTHHHHHHHHHHHHHC
T ss_pred EEEECCCCccCChHHHHHHHHHh---CCCcEEEEeCCCCCcc-hhhCHHHHHHHHHHHHhC
Confidence 99999999999987544433333 3468999999999987 345678899999999863
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=177.55 Aligned_cols=204 Identities=19% Similarity=0.189 Sum_probs=145.0
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccccccc---chhhhHHHHhCCcEEEEECCCCCCCChhhhHHHH--
Q 008274 331 VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINT---VDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI-- 405 (571)
Q Consensus 331 ~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~---~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~-- 405 (571)
.+.+.++.|... +.|.||++||++.+.. .|... ...++..|+++||.|+++|+||+|.+........
T Consensus 49 ~~~~~~~~p~~~-----~~~~vvl~HG~g~~~~---~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~ 120 (328)
T 1qlw_A 49 QMYVRYQIPQRA-----KRYPITLIHGCCLTGM---TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAV 120 (328)
T ss_dssp CEEEEEEEETTC-----CSSCEEEECCTTCCGG---GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHH
T ss_pred eEEEEEEccCCC-----CCccEEEEeCCCCCCC---ccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccc
Confidence 466667777642 2366888999875533 33210 0135788999999999999999987754321110
Q ss_pred -----------------------hccCC----CC---------------------------CchhHHHHHHHHHHcCCCc
Q 008274 406 -----------------------KHNCG----RI---------------------------DAEDQLTGAEWLIKQGLAK 431 (571)
Q Consensus 406 -----------------------~~~~~----~~---------------------------~~~D~~~~~~~l~~~~~~d 431 (571)
...++ .. ..+.+.+++..+.++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--- 197 (328)
T 1qlw_A 121 KLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL--- 197 (328)
T ss_dssp HTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH---
T ss_pred cccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh---
Confidence 00000 00 0111555555555532
Q ss_pred CCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEE
Q 008274 432 VGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLV 511 (571)
Q Consensus 432 ~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli 511 (571)
.+++++|||+||.+++.++.++|++++++|+.+|... .++......+++|+|++
T Consensus 198 -~~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~-------------------------~~~~~~~~~~~~PvLii 251 (328)
T 1qlw_A 198 -DGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC-------------------------PKPEDVKPLTSIPVLVV 251 (328)
T ss_dssp -TSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC-------------------------CCGGGCGGGTTSCEEEE
T ss_pred -CCceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC-------------------------CCHHHHhhccCCCEEEE
Confidence 3899999999999999999999999999999887531 00111123356899999
Q ss_pred ecCCCCCCCh-----HHHHHHHHHHHHcCCCeeEEEcCCCC-----CCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 512 HGMIDENVHF-----RHTARLINALVAARKPYEILIFPDER-----HMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 512 ~G~~D~~v~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~-----H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
||++|..+++ +.+..+++.+.+.|.+++++++|++| |.+....+...+.+.+.+||++++
T Consensus 252 ~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~ 321 (328)
T 1qlw_A 252 FGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 321 (328)
T ss_dssp ECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred eccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhcc
Confidence 9999999996 89999999999999999999999666 988655557889999999998864
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-20 Score=173.35 Aligned_cols=203 Identities=19% Similarity=0.242 Sum_probs=131.4
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+++.. .|...+..|+++||.|+++|+||+|.+........... ..+|+.++++++.+.+
T Consensus 17 ~~vvllHG~~~~~~-------~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~----~~~d~~~~~~~l~~~~- 84 (247)
T 1tqh_A 17 RAVLLLHGFTGNSA-------DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDD----WWQDVMNGYEFLKNKG- 84 (247)
T ss_dssp CEEEEECCTTCCTH-------HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHH----HHHHHHHHHHHHHHHT-
T ss_pred cEEEEECCCCCChH-------HHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHH----HHHHHHHHHHHHHHcC-
Confidence 57888999766533 34556788889999999999999996543211000011 1345556666665543
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEc-CccCCccc--ccc---hhhhhh---cC---------------CC
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSG-APVTSWDG--YDT---FYTEKY---MG---------------LP 485 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~-~~~~~~~~--~~~---~~~~~~---~g---------------~~ 485 (571)
.+++.|+||||||.+++.++.++| ++++|+. +|...... ... .+...+ .+ .+
T Consensus 85 --~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (247)
T 1tqh_A 85 --YEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTP 160 (247)
T ss_dssp --CCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSC
T ss_pred --CCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhhhhcccCCC
Confidence 358999999999999999999998 6776654 44321100 000 000000 00 00
Q ss_pred CCChhhhcc--CCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHH
Q 008274 486 SEDPVGYEY--SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 563 (571)
Q Consensus 486 ~~~~~~~~~--~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i 563 (571)
......+.. .+....+.++++|+|+++|++|..+|++.++.+++.+. +.+.+++++|++||.+...+..+.+.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~e~~~~~~~~~i 238 (247)
T 1tqh_A 161 MKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIE--SPVKQIKWYEQSGHVITLDQEKDQLHEDI 238 (247)
T ss_dssp CTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCC--CSSEEEEEETTCCSSGGGSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcC--CCceEEEEeCCCceeeccCccHHHHHHHH
Confidence 000000000 11223567889999999999999999999888877662 13479999999999974444568899999
Q ss_pred HHHHHHh
Q 008274 564 WEFIERT 570 (571)
Q Consensus 564 ~~fl~~~ 570 (571)
.+||++.
T Consensus 239 ~~Fl~~~ 245 (247)
T 1tqh_A 239 YAFLESL 245 (247)
T ss_dssp HHHHHHS
T ss_pred HHHHHhc
Confidence 9999863
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-19 Score=171.09 Aligned_cols=215 Identities=16% Similarity=0.185 Sum_probs=139.2
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHH
Q 008274 324 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA 403 (571)
Q Consensus 324 ~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~ 403 (571)
++..+|..+++..+. +.|.||++||.+.+.. .|...+..|+++||.|+++|+||+|.+....
T Consensus 3 ~~~~~g~~l~y~~~g---------~g~~vvllHG~~~~~~-------~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-- 64 (274)
T 1a8q_A 3 CTTRDGVEIFYKDWG---------QGRPVVFIHGWPLNGD-------AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVW-- 64 (274)
T ss_dssp EECTTSCEEEEEEEC---------SSSEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--
T ss_pred EEccCCCEEEEEecC---------CCceEEEECCCcchHH-------HHHHHHHHHHhCCCeEEEEcCCCCCCCCCCC--
Confidence 456688888766542 1256899999776533 3455678899999999999999999875321
Q ss_pred HHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-CCeeEEEEEcCccCCcc--------ccc
Q 008274 404 SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWD--------GYD 474 (571)
Q Consensus 404 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-~~~~~~~v~~~~~~~~~--------~~~ 474 (571)
.....+++.+.+..+.+.- +.+++.++||||||.+++.+++++ |++++++|+.++..... ...
T Consensus 65 ------~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 136 (274)
T 1a8q_A 65 ------DGYDFDTFADDLNDLLTDL--DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVP 136 (274)
T ss_dssp ------SCCSHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBC
T ss_pred ------CCCcHHHHHHHHHHHHHHc--CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccch
Confidence 1122344444444444331 446899999999999999877776 99999999887643210 000
Q ss_pred -chh------------------hhhhcCCC--C--CChh---h-------------------hccCCcchhhccCCCcEE
Q 008274 475 -TFY------------------TEKYMGLP--S--EDPV---G-------------------YEYSSVMHHVHKMKGKLL 509 (571)
Q Consensus 475 -~~~------------------~~~~~g~~--~--~~~~---~-------------------~~~~s~~~~~~~~~~p~l 509 (571)
..+ ...+.+.. . ...+ . +...+....+.++++|+|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 216 (274)
T 1a8q_A 137 DEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTL 216 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEE
T ss_pred HHHHHHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEE
Confidence 000 00111110 0 0000 0 011122344677899999
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCC--cHHHHHHHHHHHHH
Q 008274 510 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHR--DRIYMEERIWEFIE 568 (571)
Q Consensus 510 li~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~i~~fl~ 568 (571)
+++|++|..++++........+ ..+.++++++++||.+. .+ ..+.+.+.+.+||+
T Consensus 217 ii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~-~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 217 VVHGDDDQVVPIDATGRKSAQI---IPNAELKVYEGSSHGIA-MVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp EEEETTCSSSCGGGTHHHHHHH---STTCEEEEETTCCTTTT-TSTTHHHHHHHHHHHHHT
T ss_pred EEecCcCCCCCcHHHHHHHHhh---CCCceEEEECCCCCcee-cccCCHHHHHHHHHHHhc
Confidence 9999999999988554443332 35789999999999874 34 78889999999985
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.83 E-value=4e-19 Score=170.36 Aligned_cols=232 Identities=14% Similarity=0.069 Sum_probs=155.2
Q ss_pred CCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC
Q 008274 317 EPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 317 ~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
...+.+++.+. .|..+.++ |.|.+ + |+||++||++.... ...|... ....+.+++.|++|+++|+++++
T Consensus 9 ~~~~~~~~~S~~~~~~~~~~-~~P~~------~-p~vvllHG~~~~~~-~~~w~~~-~~~~~~~~~~~~~vv~pd~~~~~ 78 (280)
T 1r88_A 9 APYENLMVPSPSMGRDIPVA-FLAGG------P-HAVYLLDAFNAGPD-VSNWVTA-GNAMNTLAGKGISVVAPAGGAYS 78 (280)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS------S-SEEEEECCSSCCSS-SCHHHHT-SCHHHHHTTSSSEEEEECCCTTS
T ss_pred CCEEEEEEECcccCCcceEE-EeCCC------C-CEEEEECCCCCCCC-hhhhhhc-ccHHHHHhcCCeEEEEECCCCCC
Confidence 46788888875 67888888 77754 2 79999999853211 1233211 11356778899999999998654
Q ss_pred CChhhhHHHHhccCCCCCchh-H-HHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc
Q 008274 396 RRGLKFEASIKHNCGRIDAED-Q-LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY 473 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D-~-~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~ 473 (571)
.+.. +..... + ...+ + .+.+.++.++..+++++++|+|+||||++++.++.++|++|+++++.+|..++...
T Consensus 79 ~~~~-~~~~~~---~--~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~ 152 (280)
T 1r88_A 79 MYTN-WEQDGS---K--QWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNT 152 (280)
T ss_dssp TTSB-CSSCTT---C--BHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSH
T ss_pred ccCC-CCCCCC---C--cHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCc
Confidence 3211 000000 0 1111 1 23344444434467789999999999999999999999999999999998875432
Q ss_pred cc--h-----------hhhhhcCCCCCChhhhccCCcchhhccC---CCcEEEEe----cCCCCC-------CChHHHHH
Q 008274 474 DT--F-----------YTEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVH----GMIDEN-------VHFRHTAR 526 (571)
Q Consensus 474 ~~--~-----------~~~~~~g~~~~~~~~~~~~s~~~~~~~~---~~p~lli~----G~~D~~-------v~~~~~~~ 526 (571)
.. . ..+.+++.+. .+.+...+|+..++++ ..|+++.| |+.|.. ++.+++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~ 230 (280)
T 1r88_A 153 TTNGAIAAGMQQFGGVDTNGMWGAPQ--LGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRM 230 (280)
T ss_dssp HHHHHHHHHHHHHHCCCTHHHHCCGG--GSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHH
T ss_pred cchhhHHHHhhhccccchhhhcCCCc--hhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHH
Confidence 10 0 0112223322 2356667887777666 47999999 999984 58899999
Q ss_pred HHHHHHHcC-CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 527 LINALVAAR-KPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 527 ~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++++|++.| .++++.++++++|.+. .........+.||.+
T Consensus 231 ~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~~~~ 271 (280)
T 1r88_A 231 FYNQYRSVGGHNGHFDFPASGDNGWG---SWAPQLGAMSGDIVG 271 (280)
T ss_dssp HHHHHHHTTCCSEEEECCSSCCSSHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCcceEEEecCCCCcChh---HHHHHHHHHHHHHHH
Confidence 999999999 9999999988899863 233334455555543
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=172.60 Aligned_cols=184 Identities=15% Similarity=0.092 Sum_probs=134.7
Q ss_pred EEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCC
Q 008274 334 GALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRID 413 (571)
Q Consensus 334 ~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~ 413 (571)
+.+|.|.....+.++.|+||++||++++.. .+..++..|+++||.|+++|+||+. .
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~~s~-----------------~ 89 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAGPS-------TYAGLLSHWASHGFVVAAAETSNAG-----------------T 89 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCCGG-------GGHHHHHHHHHHTCEEEEECCSCCT-----------------T
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCCch-------hHHHHHHHHHhCCeEEEEecCCCCc-----------------c
Confidence 677888652111137899999999877532 3456788899999999999999641 1
Q ss_pred chhHHHHHHHHHHc---------CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCC
Q 008274 414 AEDQLTGAEWLIKQ---------GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGL 484 (571)
Q Consensus 414 ~~D~~~~~~~l~~~---------~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 484 (571)
..|+..+++++.+. ..+|.++++++||||||.+++.++ .+.+++++++.+|.... .
T Consensus 90 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~-------------~ 154 (258)
T 2fx5_A 90 GREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG-------------L 154 (258)
T ss_dssp SHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS-------------T
T ss_pred HHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc-------------c
Confidence 34455556665542 245778999999999999999887 45678888887764321 0
Q ss_pred CCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHH-HHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHH
Q 008274 485 PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRH-TARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 563 (571)
Q Consensus 485 ~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i 563 (571)
+ .....+.++++|+|+++|++|..+++.. ...+++. .+.+++++++++++|.+.. +....+.+.+
T Consensus 155 ~----------~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~-~~~~~~~~~i 220 (258)
T 2fx5_A 155 G----------HDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRR---ANVPVFWGERRYVSHFEPV-GSGGAYRGPS 220 (258)
T ss_dssp T----------CCGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHH---CSSCEEEEEESSCCTTSST-TTCGGGHHHH
T ss_pred c----------cchhhhccCCCCEEEEEcCCCcccCchhhHHHHHhc---cCCCeEEEEECCCCCcccc-chHHHHHHHH
Confidence 0 0113466788999999999999999886 7777665 3578999999999998743 3345678889
Q ss_pred HHHHHHh
Q 008274 564 WEFIERT 570 (571)
Q Consensus 564 ~~fl~~~ 570 (571)
.+||+++
T Consensus 221 ~~fl~~~ 227 (258)
T 2fx5_A 221 TAWFRFQ 227 (258)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999865
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=175.16 Aligned_cols=217 Identities=16% Similarity=0.126 Sum_probs=146.9
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
+...++. +|..+.+....+ .|+||++||.+++.. .|..+++.|++ ||.|+++|+||+|.+..
T Consensus 49 ~~~~~~~-~~~~~~~~~~g~---------~p~vv~lhG~~~~~~-------~~~~~~~~L~~-~~~v~~~D~~G~G~S~~ 110 (314)
T 3kxp_A 49 ISRRVDI-GRITLNVREKGS---------GPLMLFFHGITSNSA-------VFEPLMIRLSD-RFTTIAVDQRGHGLSDK 110 (314)
T ss_dssp EEEEEEC-SSCEEEEEEECC---------SSEEEEECCTTCCGG-------GGHHHHHTTTT-TSEEEEECCTTSTTSCC
T ss_pred ceeeEEE-CCEEEEEEecCC---------CCEEEEECCCCCCHH-------HHHHHHHHHHc-CCeEEEEeCCCcCCCCC
Confidence 4444444 677777665532 378999999876543 24445677766 79999999999987752
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc----
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT---- 475 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~---- 475 (571)
. ......++..+.+..+++.- +.++++++|||+||.+++.++.++|++++++|+.+|.........
T Consensus 111 ~--------~~~~~~~~~~~dl~~~l~~l--~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 180 (314)
T 3kxp_A 111 P--------ETGYEANDYADDIAGLIRTL--ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALE 180 (314)
T ss_dssp C--------SSCCSHHHHHHHHHHHHHHH--TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHH
T ss_pred C--------CCCCCHHHHHHHHHHHHHHh--CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHH
Confidence 1 12234555555555555542 346899999999999999999999999999999887654321100
Q ss_pred ------------------hhhhhhcCCCCCChhhh---------------------------ccCCcchhhccCCCcEEE
Q 008274 476 ------------------FYTEKYMGLPSEDPVGY---------------------------EYSSVMHHVHKMKGKLLL 510 (571)
Q Consensus 476 ------------------~~~~~~~g~~~~~~~~~---------------------------~~~s~~~~~~~~~~p~ll 510 (571)
.+...+...+......+ ...+....+.++++|+|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Li 260 (314)
T 3kxp_A 181 ARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLI 260 (314)
T ss_dssp HHTTTTCSCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEE
T ss_pred HHhhhchhhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEE
Confidence 00000000000000000 001344556788999999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 511 VHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 511 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++|++|..++++.+..+.+.+ .+++++++|++||.+ ..++...+.+.+.+||++
T Consensus 261 i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~g~gH~~-~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 261 VRGESSKLVSAAALAKTSRLR----PDLPVVVVPGADHYV-NEVSPEITLKAITNFIDA 314 (314)
T ss_dssp EEETTCSSSCHHHHHHHHHHC----TTSCEEEETTCCSCH-HHHCHHHHHHHHHHHHHC
T ss_pred EecCCCccCCHHHHHHHHHhC----CCceEEEcCCCCCcc-hhhCHHHHHHHHHHHHhC
Confidence 999999999999888887765 457899999999987 445677889999999974
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=174.65 Aligned_cols=221 Identities=13% Similarity=0.062 Sum_probs=146.2
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC-CCC
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-ARR 397 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~~ 397 (571)
.+...++. ++..+.++.+.+. ..|+||++||++++.. . |...+..|++ ||.|+++|+||+ |.+
T Consensus 45 ~~~~~v~~-~~~~~~~~~~g~~-------~~~~vv~lHG~~~~~~---~----~~~~~~~L~~-g~~vi~~D~~G~gG~s 108 (306)
T 2r11_A 45 CKSFYIST-RFGQTHVIASGPE-------DAPPLVLLHGALFSST---M----WYPNIADWSS-KYRTYAVDIIGDKNKS 108 (306)
T ss_dssp CEEEEECC-TTEEEEEEEESCT-------TSCEEEEECCTTTCGG---G----GTTTHHHHHH-HSEEEEECCTTSSSSC
T ss_pred cceEEEec-CCceEEEEeeCCC-------CCCeEEEECCCCCCHH---H----HHHHHHHHhc-CCEEEEecCCCCCCCC
Confidence 35555555 4456777665432 3478999999877643 2 3445677877 999999999999 544
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch-
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF- 476 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~- 476 (571)
... .......++.+.+..+++.- +.++++|+|||+||.+++.++.++|++++++|+.+|..........
T Consensus 109 ~~~--------~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 178 (306)
T 2r11_A 109 IPE--------NVSGTRTDYANWLLDVFDNL--GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDF 178 (306)
T ss_dssp EEC--------SCCCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHH
T ss_pred CCC--------CCCCCHHHHHHHHHHHHHhc--CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHH
Confidence 321 11223555555555555542 3468999999999999999999999999999999987653211000
Q ss_pred ---------------hhhhhcCCCCCC-----------------hhhh-------ccCCcchhhccCCCcEEEEecCCCC
Q 008274 477 ---------------YTEKYMGLPSED-----------------PVGY-------EYSSVMHHVHKMKGKLLLVHGMIDE 517 (571)
Q Consensus 477 ---------------~~~~~~g~~~~~-----------------~~~~-------~~~s~~~~~~~~~~p~lli~G~~D~ 517 (571)
+.....+..... ...+ ........+.++++|+|+++|++|.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 258 (306)
T 2r11_A 179 YKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEV 258 (306)
T ss_dssp HHHHHTTTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCC
T ss_pred HHHHhHHHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCc
Confidence 000000110000 0000 0112334567889999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 518 NVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 518 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.++++.+.++++.+ ..++++++++++||.+ ..++...+.+.+.+||++
T Consensus 259 ~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 259 IYDPHSALHRASSF---VPDIEAEVIKNAGHVL-SMEQPTYVNERVMRFFNA 306 (306)
T ss_dssp SSCHHHHHHHHHHH---STTCEEEEETTCCTTH-HHHSHHHHHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHH---CCCCEEEEeCCCCCCC-cccCHHHHHHHHHHHHhC
Confidence 99988877665543 4578999999999986 345577888999999863
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=172.96 Aligned_cols=215 Identities=13% Similarity=0.119 Sum_probs=143.6
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
.+...+|.++++..+.+. ..|+||++||.+.+.. . |...+..|++ +|.|+++|+||+|.+....
T Consensus 8 ~~~~~~g~~l~y~~~G~~-------~~p~lvl~hG~~~~~~---~----w~~~~~~L~~-~~~vi~~D~rG~G~S~~~~- 71 (266)
T 3om8_A 8 FLATSDGASLAYRLDGAA-------EKPLLALSNSIGTTLH---M----WDAQLPALTR-HFRVLRYDARGHGASSVPP- 71 (266)
T ss_dssp EEECTTSCEEEEEEESCT-------TSCEEEEECCTTCCGG---G----GGGGHHHHHT-TCEEEEECCTTSTTSCCCC-
T ss_pred EEeccCCcEEEEEecCCC-------CCCEEEEeCCCccCHH---H----HHHHHHHhhc-CcEEEEEcCCCCCCCCCCC-
Confidence 456678999988877542 2378899999766533 3 4445677765 7999999999999875321
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc-------
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT------- 475 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~------- 475 (571)
+...++++.+.+..+.+.- ..+++.++||||||.+++.++.++|++++++|+.++.........
T Consensus 72 -------~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~ 142 (266)
T 3om8_A 72 -------GPYTLARLGEDVLELLDAL--EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAA 142 (266)
T ss_dssp -------SCCCHHHHHHHHHHHHHHT--TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHH
T ss_pred -------CCCCHHHHHHHHHHHHHHh--CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHH
Confidence 1123444444444444432 346899999999999999999999999999998765432110000
Q ss_pred ------------hhhhhhcC-----CCCC------------Chhh-------hccCCcchhhccCCCcEEEEecCCCCCC
Q 008274 476 ------------FYTEKYMG-----LPSE------------DPVG-------YEYSSVMHHVHKMKGKLLLVHGMIDENV 519 (571)
Q Consensus 476 ------------~~~~~~~g-----~~~~------------~~~~-------~~~~s~~~~~~~~~~p~lli~G~~D~~v 519 (571)
.....++. .... .... +...+....+.++++|+|+++|++|..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~ 222 (266)
T 3om8_A 143 VLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVT 222 (266)
T ss_dssp HHHCSSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSS
T ss_pred HHccccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCC
Confidence 00000000 0000 0000 0111223356788999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 520 HFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 520 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+++.++.+.+.+ .+.++++++ +||.. ..+....+.+.+.+||.
T Consensus 223 ~~~~~~~l~~~i----p~a~~~~i~-~gH~~-~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 223 AASHGELIAASI----AGARLVTLP-AVHLS-NVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp CHHHHHHHHHHS----TTCEEEEES-CCSCH-HHHCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhC----CCCEEEEeC-CCCCc-cccCHHHHHHHHHHHhc
Confidence 999888887765 466888898 79976 55778889999999985
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=188.99 Aligned_cols=238 Identities=16% Similarity=0.180 Sum_probs=162.9
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCcee--ec---cccc-------cc---c-hhhhHHH
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQL--VC---DSWI-------NT---V-DMRAQYL 379 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~--~~---~~~~-------~~---~-~~~~~~l 379 (571)
+...+.+.++..||.+|.+.+|.|++. +++|+||+.||...... .. ..|. .. | ...++.|
T Consensus 38 ~~~~~~v~i~~~DG~~L~a~l~~P~~~----~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l 113 (560)
T 3iii_A 38 MIMEKDGTVEMRDGEKLYINIFRPNKD----GKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFW 113 (560)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEECSSS----SCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHH
T ss_pred eEEEEEEEEECCCCcEEEEEEEecCCC----CCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHH
Confidence 445678999999999999999999863 68999999998554421 00 0010 00 0 1136899
Q ss_pred HhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeE
Q 008274 380 RSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQ 459 (571)
Q Consensus 380 ~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~ 459 (571)
+++||+|+.+|+||+|++++.+.. ++....+|+.++++|+.+++++| .+|+++|+||||++++.+|+.+|+.++
T Consensus 114 a~~Gy~vv~~D~RG~G~S~G~~~~-----~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~ 187 (560)
T 3iii_A 114 VPNDYVVVKVALRGSDKSKGVLSP-----WSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLK 187 (560)
T ss_dssp GGGTCEEEEEECTTSTTCCSCBCT-----TSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEE
T ss_pred HhCCCEEEEEcCCCCCCCCCcccc-----CChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceE
Confidence 999999999999999998876542 22234789999999999988877 799999999999999999999999999
Q ss_pred EEEEcCccCCccc---c---------cchhhh-----------------hhcCCCCCChhhhccCCcchhhccCCCcEEE
Q 008274 460 CAVSGAPVTSWDG---Y---------DTFYTE-----------------KYMGLPSEDPVGYEYSSVMHHVHKMKGKLLL 510 (571)
Q Consensus 460 ~~v~~~~~~~~~~---~---------~~~~~~-----------------~~~g~~~~~~~~~~~~s~~~~~~~~~~p~ll 510 (571)
|+|+.+|+.++.. + ...|.. .++..+..+ +.|...++ .+.+|++|+|+
T Consensus 188 aiv~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d-~~W~~~~~--~~~~I~vPvl~ 264 (560)
T 3iii_A 188 AMIPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFD-DFWKQRQV--PLSQIKTPLLT 264 (560)
T ss_dssp EEEEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSC-HHHHTTBC--CGGGCCSCEEE
T ss_pred EEEecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcc-hHhhccCC--chhhCCCCEEE
Confidence 9999999988531 0 001110 001111111 12333333 67899999999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 511 VHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 511 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++|-.|..+....+.+.++++... ...+++.+. +|... .......+..++||+++|
T Consensus 265 v~Gw~D~~~~~~g~l~~y~~l~~~--~k~l~ih~~-~~~~~--~~~~~~~~~~~~wfD~~L 320 (560)
T 3iii_A 265 CASWSTQGLHNRGSFEGFKQAASE--EKWLYVHGR-KEWES--YYARENLERQKSFFDFYL 320 (560)
T ss_dssp EEEGGGTTTTHHHHHHHHHHCCCS--SEEEEEESS-CHHHH--HHSHHHHHHHHHHHHHHT
T ss_pred eCCcCCCcccchhHHHHHHhcccc--CcEEEECCC-CCcCc--ccChhHHHHHHHHHHHHh
Confidence 999999866777777777766432 233433222 22110 001235577899999987
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.9e-19 Score=168.99 Aligned_cols=202 Identities=11% Similarity=0.001 Sum_probs=136.8
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+++.. .|...+..|+++||.|+++|+||+|.+..... ......+..+.+..+.+.-.
T Consensus 5 ~~vv~lHG~~~~~~-------~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~l~~~l~~l~ 70 (258)
T 3dqz_A 5 HHFVLVHNAYHGAW-------IWYKLKPLLESAGHRVTAVELAASGIDPRPIQ-------AVETVDEYSKPLIETLKSLP 70 (258)
T ss_dssp CEEEEECCTTCCGG-------GGTTHHHHHHHTTCEEEEECCTTSTTCSSCGG-------GCCSHHHHHHHHHHHHHTSC
T ss_pred CcEEEECCCCCccc-------cHHHHHHHHHhCCCEEEEecCCCCcCCCCCCC-------ccccHHHhHHHHHHHHHHhc
Confidence 78999999877643 34556889999999999999999988764211 11235555555555554432
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch-hh------------------------------
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF-YT------------------------------ 478 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~------------------------------ 478 (571)
..+++.|+|||+||.+++.++.++|++++++|+.+|.......... ..
T Consensus 71 -~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (258)
T 3dqz_A 71 -ENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKM 149 (258)
T ss_dssp -TTCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEEC
T ss_pred -ccCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhh
Confidence 1378999999999999999999999999999988875432111000 00
Q ss_pred ------hhhcCCCC-CChh--------------hhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCC
Q 008274 479 ------EKYMGLPS-EDPV--------------GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 537 (571)
Q Consensus 479 ------~~~~g~~~-~~~~--------------~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~ 537 (571)
..+..... .... .+............++|+|+++|++|..+|++....+.+.+ .+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~ 225 (258)
T 3dqz_A 150 GPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNF----NV 225 (258)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHS----CC
T ss_pred hHHHHHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhC----Cc
Confidence 00000000 0000 00001112222223589999999999999999888887765 45
Q ss_pred eeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 538 YEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 538 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.+++++|++||.+ ..++...+.+.+.+|++++|
T Consensus 226 ~~~~~~~~~gH~~-~~~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 226 SKVYEIDGGDHMV-MLSKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp SCEEEETTCCSCH-HHHSHHHHHHHHHHHHHHTC
T ss_pred ccEEEcCCCCCch-hhcChHHHHHHHHHHHHHhC
Confidence 6899999999987 34678889999999999876
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-19 Score=172.17 Aligned_cols=220 Identities=18% Similarity=0.173 Sum_probs=142.7
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh-
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL- 399 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~- 399 (571)
...+...+|.++++..+.|++ .|.||++||.+++... .|...+..| +.||.|+++|+||+|.+..
T Consensus 4 ~~~~~~~~g~~l~~~~~G~~~-------~~~vvllHG~~~~~~~------~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~ 69 (286)
T 2yys_A 4 EIGYVPVGEAELYVEDVGPVE-------GPALFVLHGGPGGNAY------VLREGLQDY-LEGFRVVYFDQRGSGRSLEL 69 (286)
T ss_dssp EEEEEECSSCEEEEEEESCTT-------SCEEEEECCTTTCCSH------HHHHHHGGG-CTTSEEEEECCTTSTTSCCC
T ss_pred ceeEEeECCEEEEEEeecCCC-------CCEEEEECCCCCcchh------HHHHHHHHh-cCCCEEEEECCCCCCCCCCC
Confidence 334445578888888776532 2678999998765320 234455666 4699999999999998763
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-ch--
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-TF-- 476 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~-- 476 (571)
.... ....++++.+.+..+.+.- ..+++.|+||||||.+++.++.++|+ ++++|+.++........ ..
T Consensus 70 ~~~~------~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~ 140 (286)
T 2yys_A 70 PQDP------RLFTVDALVEDTLLLAEAL--GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAE 140 (286)
T ss_dssp CSCG------GGCCHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHH
T ss_pred ccCc------ccCcHHHHHHHHHHHHHHh--CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHH
Confidence 1100 0122444444444444432 34689999999999999999999999 99999988765221100 00
Q ss_pred -------------hh------------hhhc-CCC---------------C-CC--h-----hhhccCCcchhhccCCCc
Q 008274 477 -------------YT------------EKYM-GLP---------------S-ED--P-----VGYEYSSVMHHVHKMKGK 507 (571)
Q Consensus 477 -------------~~------------~~~~-g~~---------------~-~~--~-----~~~~~~s~~~~~~~~~~p 507 (571)
.. ..+. ..+ . .. . ......+....+.++++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 220 (286)
T 2yys_A 141 AAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRP 220 (286)
T ss_dssp HTTCCCCSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSC
T ss_pred HhccccchhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCC
Confidence 00 0000 000 0 00 0 000111223346678899
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 508 LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 508 ~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+|+++|++|..++++ +..+.+ +. +.+++++|++||.+ ..+....+.+.+.+||.+.
T Consensus 221 ~lvi~G~~D~~~~~~-~~~~~~-~~----~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 221 LYVLVGERDGTSYPY-AEEVAS-RL----RAPIRVLPEAGHYL-WIDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp EEEEEETTCTTTTTT-HHHHHH-HH----TCCEEEETTCCSSH-HHHCHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCCCcCCHh-HHHHHh-CC----CCCEEEeCCCCCCc-ChhhHHHHHHHHHHHHHhh
Confidence 999999999999998 888877 63 45788999999987 3456788999999999763
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=172.67 Aligned_cols=213 Identities=15% Similarity=0.128 Sum_probs=139.0
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHH
Q 008274 326 ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI 405 (571)
Q Consensus 326 ~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~ 405 (571)
..+|..+++..+. ...| ||++||.+.+.. .|...+..|+++||.|+++|+||+|.+....
T Consensus 9 ~~~g~~l~y~~~g--------~g~p-vvllHG~~~~~~-------~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~---- 68 (277)
T 1brt_A 9 NSTSIDLYYEDHG--------TGQP-VVLIHGFPLSGH-------SWERQSAALLDAGYRVITYDRRGFGQSSQPT---- 68 (277)
T ss_dssp TTEEEEEEEEEEC--------SSSE-EEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS----
T ss_pred cCCCcEEEEEEcC--------CCCe-EEEECCCCCcHH-------HHHHHHHHHhhCCCEEEEeCCCCCCCCCCCC----
Confidence 3466667665442 1124 788999876543 3556688899999999999999999875321
Q ss_pred hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-eeEEEEEcCccCCccc---------cc-
Q 008274 406 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGAPVTSWDG---------YD- 474 (571)
Q Consensus 406 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-~~~~~v~~~~~~~~~~---------~~- 474 (571)
.....++..+.+..+.+.- +.+++.|+||||||.+++.++.++|+ +++++|+.++...... ..
T Consensus 69 ----~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 142 (277)
T 1brt_A 69 ----TGYDYDTFAADLNTVLETL--DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQ 142 (277)
T ss_dssp ----SCCSHHHHHHHHHHHHHHH--TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCH
T ss_pred ----CCccHHHHHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccH
Confidence 1122333333333333321 34689999999999999999999998 9999999876432110 00
Q ss_pred ch---------------h---hhhhcCC----C-CCChh---hh----------------c--cCCcchhhccCCCcEEE
Q 008274 475 TF---------------Y---TEKYMGL----P-SEDPV---GY----------------E--YSSVMHHVHKMKGKLLL 510 (571)
Q Consensus 475 ~~---------------~---~~~~~g~----~-~~~~~---~~----------------~--~~s~~~~~~~~~~p~ll 510 (571)
.. + ...+++. . ....+ .+ . ..+....+.++++|+|+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 222 (277)
T 1brt_A 143 EFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALI 222 (277)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEE
T ss_pred HHHHHHHHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEE
Confidence 00 0 0001110 0 00000 00 0 12223356778999999
Q ss_pred EecCCCCCCChHHH-HHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 511 VHGMIDENVHFRHT-ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 511 i~G~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++|++|..+|++.+ ..+.+.+ .+.++++++++||.+ ..++.+.+.+.+.+||++
T Consensus 223 i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 223 LHGTGDRTLPIENTARVFHKAL----PSAEYVEVEGAPHGL-LWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp EEETTCSSSCGGGTHHHHHHHC----TTSEEEEETTCCTTH-HHHTHHHHHHHHHHHHHC
T ss_pred EecCCCccCChHHHHHHHHHHC----CCCcEEEeCCCCcch-hhhCHHHHHHHHHHHHhC
Confidence 99999999999877 6666654 467899999999987 345678899999999863
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=172.32 Aligned_cols=213 Identities=16% Similarity=0.204 Sum_probs=135.9
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHH
Q 008274 326 ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI 405 (571)
Q Consensus 326 ~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~ 405 (571)
..+|..+++.... +-|.||++||.+++.. . |...+..|+++||.|+++|+||+|.+....
T Consensus 13 ~~~g~~l~y~~~G---------~g~~vvllHG~~~~~~---~----w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~---- 72 (281)
T 3fob_A 13 NQAPIEIYYEDHG---------TGKPVVLIHGWPLSGR---S----WEYQVPALVEAGYRVITYDRRGFGKSSQPW---- 72 (281)
T ss_dssp TTEEEEEEEEEES---------SSEEEEEECCTTCCGG---G----GTTTHHHHHHTTEEEEEECCTTSTTSCCCS----
T ss_pred CCCceEEEEEECC---------CCCeEEEECCCCCcHH---H----HHHHHHHHHhCCCEEEEeCCCCCCCCCCCc----
Confidence 4466666655442 1245778999877643 3 444578888999999999999999875321
Q ss_pred hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc-CCCeeEEEEEcCccCCccc---------cc-
Q 008274 406 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR-FPDVFQCAVSGAPVTSWDG---------YD- 474 (571)
Q Consensus 406 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~~v~~~~~~~~~~---------~~- 474 (571)
.....+++.+.+..+.+.- ..+++.|+||||||.+++.+++. +|++++++++.++...... ..
T Consensus 73 ----~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 146 (281)
T 3fob_A 73 ----EGYEYDTFTSDLHQLLEQL--ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDD 146 (281)
T ss_dssp ----SCCSHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCH
T ss_pred ----cccCHHHHHHHHHHHHHHc--CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccch
Confidence 1223444444444444432 44689999999999988776665 5899999888775422100 00
Q ss_pred c------------------hhhhhhcCCC--CC--Chh----------------------hhccCCcchhhccCCCcEEE
Q 008274 475 T------------------FYTEKYMGLP--SE--DPV----------------------GYEYSSVMHHVHKMKGKLLL 510 (571)
Q Consensus 475 ~------------------~~~~~~~g~~--~~--~~~----------------------~~~~~s~~~~~~~~~~p~ll 510 (571)
. .+...+.... .. ... .+...+....+.++++|+|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Li 226 (281)
T 3fob_A 147 ATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLI 226 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEE
T ss_pred hHHHHHHHHhhhhHHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEE
Confidence 0 0000111110 00 000 00112233456788999999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 511 VHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 511 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
++|++|..+|++.+.++.... -.+.++.+++++||.+ ..++.+.+.+.+.+||+
T Consensus 227 i~G~~D~~~p~~~~~~~~~~~---~p~~~~~~i~~~gH~~-~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 227 IHGDSDATVPFEYSGKLTHEA---IPNSKVALIKGGPHGL-NATHAKEFNEALLLFLK 280 (281)
T ss_dssp EEETTCSSSCGGGTHHHHHHH---STTCEEEEETTCCTTH-HHHTHHHHHHHHHHHHC
T ss_pred EecCCCCCcCHHHHHHHHHHh---CCCceEEEeCCCCCch-hhhhHHHHHHHHHHHhh
Confidence 999999999998764433322 3678999999999987 45678889999999985
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.8e-19 Score=166.38 Aligned_cols=209 Identities=15% Similarity=0.127 Sum_probs=143.7
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
.+...+|.++.+..+.+ .|.||++||.+++.. .|..+++.|+ .||.|+++|+||+|.+....
T Consensus 6 ~~~~~~g~~l~~~~~g~---------~~~vv~lHG~~~~~~-------~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~- 67 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSGS---------GPPVVLVGGALSTRA-------GGAPLAERLA-PHFTVICYDRRGRGDSGDTP- 67 (262)
T ss_dssp EEECTTSCEEEEEEEEC---------SSEEEEECCTTCCGG-------GGHHHHHHHT-TTSEEEEECCTTSTTCCCCS-
T ss_pred eEEcCCCcEEEEEEcCC---------CCcEEEECCCCcChH-------HHHHHHHHHh-cCcEEEEEecCCCcCCCCCC-
Confidence 45667888888766531 267889999877643 2455677777 89999999999998775321
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc----c---
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD----T--- 475 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~----~--- 475 (571)
....++..+.+..+++.- + .++.++|||+||.+++.++.++| +++++++.+|........ .
T Consensus 68 --------~~~~~~~~~~~~~~~~~l--~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~ 135 (262)
T 3r0v_A 68 --------PYAVEREIEDLAAIIDAA--G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQ 135 (262)
T ss_dssp --------SCCHHHHHHHHHHHHHHT--T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHH
T ss_pred --------CCCHHHHHHHHHHHHHhc--C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHH
Confidence 223555555555555542 3 68999999999999999999999 999999988865432100 0
Q ss_pred -----------------hhhhhhcCCCCCChhhhc------------------------cCCcchhhccCCCcEEEEecC
Q 008274 476 -----------------FYTEKYMGLPSEDPVGYE------------------------YSSVMHHVHKMKGKLLLVHGM 514 (571)
Q Consensus 476 -----------------~~~~~~~g~~~~~~~~~~------------------------~~s~~~~~~~~~~p~lli~G~ 514 (571)
.+.....+.+....+.+. ...+...+.++++|+|+++|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 215 (262)
T 3r0v_A 136 TRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGG 215 (262)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECT
T ss_pred HHHHHHhhccchhhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeec
Confidence 000000111111000010 112345577889999999999
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 515 IDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 515 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+|..++++....+.+.+ .+.++++++++||. .+...+.+.+.+||++
T Consensus 216 ~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~----~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 216 ASPAWIRHTAQELADTI----PNARYVTLENQTHT----VAPDAIAPVLVEFFTR 262 (262)
T ss_dssp TCCHHHHHHHHHHHHHS----TTEEEEECCCSSSS----CCHHHHHHHHHHHHC-
T ss_pred CCCCCCHHHHHHHHHhC----CCCeEEEecCCCcc----cCHHHHHHHHHHHHhC
Confidence 99999988888877765 46799999999993 3678889999999863
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.5e-19 Score=171.98 Aligned_cols=214 Identities=16% Similarity=0.159 Sum_probs=137.9
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchh-hhHHHHhCCcEEEEECCCCCCCChhhhHHHH
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDM-RAQYLRSKGILVWKLDNRGTARRGLKFEASI 405 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~-~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~ 405 (571)
.+|..+++..+.|.+ .|.||++||.+.+.. .| .. ++..|+++||.|+++|+||+|.+.....
T Consensus 8 ~~g~~l~y~~~G~~~-------~~~vvllHG~~~~~~---~w----~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~--- 70 (298)
T 1q0r_A 8 SGDVELWSDDFGDPA-------DPALLLVMGGNLSAL---GW----PDEFARRLADGGLHVIRYDHRDTGRSTTRDF--- 70 (298)
T ss_dssp ETTEEEEEEEESCTT-------SCEEEEECCTTCCGG---GS----CHHHHHHHHTTTCEEEEECCTTSTTSCCCCT---
T ss_pred cCCeEEEEEeccCCC-------CCeEEEEcCCCCCcc---ch----HHHHHHHHHhCCCEEEeeCCCCCCCCCCCCC---
Confidence 478888877765422 257889999876543 33 32 3578899999999999999998763100
Q ss_pred hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC-Cc--------------
Q 008274 406 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT-SW-------------- 470 (571)
Q Consensus 406 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~-~~-------------- 470 (571)
......++++.+.+..+++.- +.+++.|+||||||.+++.++.++|++++++|+.++.. ..
T Consensus 71 --~~~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 146 (298)
T 1q0r_A 71 --AAHPYGFGELAADAVAVLDGW--GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEP 146 (298)
T ss_dssp --TTSCCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCC
T ss_pred --CcCCcCHHHHHHHHHHHHHHh--CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhh
Confidence 001123444444444444432 44689999999999999999999999999999876543 20
Q ss_pred -----cccc-c----hh------------hhh------hc-C--CCCCC---------------------hhhhc---cC
Q 008274 471 -----DGYD-T----FY------------TEK------YM-G--LPSED---------------------PVGYE---YS 495 (571)
Q Consensus 471 -----~~~~-~----~~------------~~~------~~-g--~~~~~---------------------~~~~~---~~ 495 (571)
.... . .. ... .+ . .+... ...+. ..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (298)
T 1q0r_A 147 TLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPP 226 (298)
T ss_dssp CSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCC
T ss_pred hhcccccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCc
Confidence 0000 0 00 000 00 0 00000 00000 01
Q ss_pred Ccchh-hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 496 SVMHH-VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 496 s~~~~-~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+.... +.++++|+|+++|++|..++++.++.+.+.+ .+.+++++|++||. ....+.+.+.+||.++
T Consensus 227 ~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~gHe-----~p~~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 227 PSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI----PTARLAEIPGMGHA-----LPSSVHGPLAEVILAH 293 (298)
T ss_dssp GGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS----TTEEEEEETTCCSS-----CCGGGHHHHHHHHHHH
T ss_pred ccccccccccCCCEEEEEeCCCccCCHHHHHHHHHhC----CCCEEEEcCCCCCC-----CcHHHHHHHHHHHHHH
Confidence 11234 6788999999999999999998887776644 56799999999992 2356778889998765
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.7e-18 Score=164.24 Aligned_cols=221 Identities=14% Similarity=0.111 Sum_probs=142.9
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
.+...+|.++ .+|.|.. ++.|+||++|||+........| .......+++.||.|+++|||+.+.. .+.
T Consensus 8 ~~~~~~~~~~--~~y~p~~-----~~~p~iv~~HGGg~~~g~~~~~---~~~~~~~l~~~g~~Vi~vdYrlaPe~--~~p 75 (274)
T 2qru_A 8 NQTLANGATV--TIYPTTT-----EPTNYVVYLHGGGMIYGTKSDL---PEELKELFTSNGYTVLALDYLLAPNT--KID 75 (274)
T ss_dssp EEECTTSCEE--EEECCSS-----SSCEEEEEECCSTTTSCCGGGC---CHHHHHHHHTTTEEEEEECCCCTTTS--CHH
T ss_pred cccccCCeeE--EEEcCCC-----CCCcEEEEEeCccccCCChhhc---hHHHHHHHHHCCCEEEEeCCCCCCCC--CCc
Confidence 4455566544 5677753 3569999999998643322222 23346678889999999999986543 222
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh---cCCCeeEEEEEcCccCCcccccc----
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA---RFPDVFQCAVSGAPVTSWDGYDT---- 475 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~---~~~~~~~~~v~~~~~~~~~~~~~---- 475 (571)
. .++|+.++++++.++.. +.++++|+|+|+||.+|+.++. ..+.++++++..+|..+......
T Consensus 76 ~---------~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~ 145 (274)
T 2qru_A 76 H---------ILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKL 145 (274)
T ss_dssp H---------HHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCS
T ss_pred H---------HHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhh
Confidence 1 17899999999987642 2689999999999999999887 35777888888777665211000
Q ss_pred -------hhhhhhcC-CC--CC---Ch-h------------hhc---------cCCcc-hhhccCCCcEEEEecCCCCCC
Q 008274 476 -------FYTEKYMG-LP--SE---DP-V------------GYE---------YSSVM-HHVHKMKGKLLLVHGMIDENV 519 (571)
Q Consensus 476 -------~~~~~~~g-~~--~~---~~-~------------~~~---------~~s~~-~~~~~~~~p~lli~G~~D~~v 519 (571)
........ .+ .. .. . .+. ..+.. ..+.++ +|+||++|+.|..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~ 224 (274)
T 2qru_A 146 LKQAISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEV 224 (274)
T ss_dssp CSSCCCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSS
T ss_pred ccccccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCc
Confidence 00000000 00 00 00 0 000 00000 123455 79999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCC---CcHHHHHHHHHHHHHHh
Q 008274 520 HFRHTARLINALVAARKPYEILIFPDERHMPRRH---RDRIYMEERIWEFIERT 570 (571)
Q Consensus 520 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~---~~~~~~~~~i~~fl~~~ 570 (571)
+...++++.++ ..+++++++++++|++... .....+.+.+.+||+++
T Consensus 225 ~~~~~~~l~~~----~~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 274 (274)
T 2qru_A 225 PFRYSKKIGRT----IPESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKER 274 (274)
T ss_dssp CTHHHHHHHHH----STTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHh----CCCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhhC
Confidence 98877777665 4678999999999998321 23346688899999764
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.81 E-value=9.5e-19 Score=174.84 Aligned_cols=232 Identities=14% Similarity=0.083 Sum_probs=150.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeec----------ccccccchhhh---HHHHhCCcEEEEECCCC-
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVC----------DSWINTVDMRA---QYLRSKGILVWKLDNRG- 393 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~----------~~~~~~~~~~~---~~l~~~G~~v~~~d~rG- 393 (571)
+|..+.+..+.+... ++.|+||++||.+++.... ..| ...+ ..|.+.||.|+++|+||
T Consensus 29 ~g~~l~y~~~g~~~~----~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~l~~~g~~vi~~D~~G~ 100 (366)
T 2pl5_A 29 SPVVIAYETYGTLSS----SKNNAILICHALSGDAHAAGYHSGSDKKPGWW----DDYIGPGKSFDTNQYFIICSNVIGG 100 (366)
T ss_dssp SSEEEEEEEEECCCT----TSCCEEEEECCSSCCSCCSSBSSTTCSSCCTT----TTTEETTSSEETTTCEEEEECCTTC
T ss_pred cCceeeEEeccCcCC----CCCceEEEecccCCcccccccccccccccchH----HhhcCCcccccccccEEEEecCCCc
Confidence 345677766665431 2357899999987764310 023 2223 24557899999999999
Q ss_pred -CCCChhhhHHHH-----hccCCCCCchhHHHHHHHHHHcCCCcCCcE-EEEeechHHHHHHHHHhcCCCeeEEEEEcCc
Q 008274 394 -TARRGLKFEASI-----KHNCGRIDAEDQLTGAEWLIKQGLAKVGHI-GLYGWSYGGYLSAITLARFPDVFQCAVSGAP 466 (571)
Q Consensus 394 -~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i-~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~ 466 (571)
+|.++....... .........+++.+.+..+++.- +.+++ .|+||||||.+++.++.++|++++++|+.+|
T Consensus 101 ~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 178 (366)
T 2pl5_A 101 CKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL--GIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMAS 178 (366)
T ss_dssp SSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT--TCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESC
T ss_pred ccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHc--CCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEecc
Confidence 665542110000 00011234666666666666542 44688 8999999999999999999999999999888
Q ss_pred cCCcccccc---------------------------------------------hhhhhhcCCCC--------CChhhhc
Q 008274 467 VTSWDGYDT---------------------------------------------FYTEKYMGLPS--------EDPVGYE 493 (571)
Q Consensus 467 ~~~~~~~~~---------------------------------------------~~~~~~~g~~~--------~~~~~~~ 493 (571)
......... .+...+..... ...+.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (366)
T 2pl5_A 179 TAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYL 258 (366)
T ss_dssp CSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGG
T ss_pred CccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHH
Confidence 654321000 00001100000 0000010
Q ss_pred ------------------------cCC------cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEc
Q 008274 494 ------------------------YSS------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIF 543 (571)
Q Consensus 494 ------------------------~~s------~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 543 (571)
..+ ....+.++++|+|+++|++|..++++.+..+.+.+...+.+++++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (366)
T 2pl5_A 259 IYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVEL 338 (366)
T ss_dssp GSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEe
Confidence 001 11256778899999999999999999999999999877768899999
Q ss_pred -CCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 544 -PDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 544 -~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+++||.+. .+....+.+.+.+||+++
T Consensus 339 ~~~~gH~~~-~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 339 QSGEGHDSF-LLKNPKQIEILKGFLENP 365 (366)
T ss_dssp CCCBSSGGG-GSCCHHHHHHHHHHHHCC
T ss_pred CCCCCcchh-hcChhHHHHHHHHHHccC
Confidence 89999874 355678999999999875
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=172.73 Aligned_cols=233 Identities=12% Similarity=0.090 Sum_probs=151.5
Q ss_pred cCCCCCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCC---cEEEE
Q 008274 313 RLQLEPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG---ILVWK 388 (571)
Q Consensus 313 ~~~~~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G---~~v~~ 388 (571)
...++..+.+++.+. .|..+.+++|.|+++. ..+++|+|+++||++..... ..+ .....+..++.| ++|+.
T Consensus 12 ~~~~~~~~~~~~~s~~~g~~~~~~v~~P~~~~-~~~~~Pvl~~lhG~~~~~~~-~~~---~~~~~~~~~~~g~~~~ivV~ 86 (275)
T 2qm0_A 12 QIITSNTEQWKMYSKLEGKEYQIHISKPKQPA-PDSGYPVIYVLDGNAFFQTF-HEA---VKIQSVRAEKTGVSPAIIVG 86 (275)
T ss_dssp CCCCTTEEEEEEECTTTCCEEEEEEECCSSCC-CTTCEEEEEEESHHHHHHHH-HHH---HHHHGGGHHHHCCCCCEEEE
T ss_pred ceecCCceEEEEEecCCCCEEEEEEECCCCCC-CCCCccEEEEecChHHHHHH-HHH---HHHHhhcchhcCCCCeEEEE
Confidence 355778888999986 6889999999998863 23689999999997542110 011 011112223567 99999
Q ss_pred ECCCCCCCChhhhHHHHhccC----------------CCC---CchhHH--HHHHHHHHcCCCcCCcEEEEeechHHHHH
Q 008274 389 LDNRGTARRGLKFEASIKHNC----------------GRI---DAEDQL--TGAEWLIKQGLAKVGHIGLYGWSYGGYLS 447 (571)
Q Consensus 389 ~d~rG~~~~~~~~~~~~~~~~----------------~~~---~~~D~~--~~~~~l~~~~~~d~~~i~l~G~S~GG~~a 447 (571)
+|+|+.+.++...+....... ... ...+.+ +.+.++.++..+|+++++|+||||||+++
T Consensus 87 i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a 166 (275)
T 2qm0_A 87 VGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFA 166 (275)
T ss_dssp EECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHH
T ss_pred ECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHH
Confidence 999975433211111111100 000 111211 23344445555788999999999999999
Q ss_pred HHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHH
Q 008274 448 AITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARL 527 (571)
Q Consensus 448 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~ 527 (571)
+.++.++|++|+++++.+|...|.... +... .+.+.... .......|++|+||+.|..++..++.++
T Consensus 167 ~~~~~~~p~~f~~~~~~s~~~~~~~~~------~~~~----~~~~~~~~---~~~~~~~~~~l~~G~~D~~~~~~~~~~~ 233 (275)
T 2qm0_A 167 LHILFTNLNAFQNYFISSPSIWWNNKS------VLEK----EENLIIEL---NNAKFETGVFLTVGSLEREHMVVGANEL 233 (275)
T ss_dssp HHHHHHCGGGCSEEEEESCCTTHHHHG------GGGG----TTHHHHHH---HTCSSCEEEEEEEETTSCHHHHHHHHHH
T ss_pred HHHHHhCchhhceeEEeCceeeeChHH------HHHH----HHHHHhhh---cccCCCceEEEEeCCcccchhhHHHHHH
Confidence 999999999999999999987542110 0000 01111000 0234457999999999999999999999
Q ss_pred HHHH---HHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 528 INAL---VAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 528 ~~~l---~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
+++| ++.|.++++.++|+++|+.. ........++||
T Consensus 234 ~~~L~~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 234 SERLLQVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp HHHHHHCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred HHHHHhcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 9999 55678999999999999752 223335556776
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.81 E-value=8.9e-20 Score=192.31 Aligned_cols=235 Identities=17% Similarity=0.181 Sum_probs=165.9
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhh-HHHHhCCcEEEEECCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRA-QYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~ 396 (571)
..+.+.++..||..|.+.+|.|.+. +++|+||++||......... .+...+ +.|+++||+|+.+|+||+|+
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~~----~~~P~vv~~~~~g~~~~~~~----~y~~~~~~~la~~Gy~vv~~D~RG~G~ 79 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDAD----GPVPVLLVRNPYDKFDVFAW----STQSTNWLEFVRDGYAVVIQDTRGLFA 79 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECCS----SCEEEEEEEESSCTTCHHHH----HTTTCCTHHHHHTTCEEEEEECTTSTT
T ss_pred EEEEEEEECCCCCEEEEEEEECCCC----CCeeEEEEECCcCCCccccc----cchhhHHHHHHHCCCEEEEEcCCCCCC
Confidence 4567899999999999999999753 57899999987544321100 121134 88999999999999999999
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCcc-CCccc---
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV-TSWDG--- 472 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~-~~~~~--- 472 (571)
++..+.. ...+.+|+.++++|+.++++.+ .+|+++|+||||++++.+++++|+.++|+|+.++. .++..
T Consensus 80 S~g~~~~------~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~~~~ 152 (587)
T 3i2k_A 80 SEGEFVP------HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWY 152 (587)
T ss_dssp CCSCCCT------TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCS
T ss_pred CCCcccc------ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccccccee
Confidence 8765432 1235889999999999887765 79999999999999999999999999999999888 65421
Q ss_pred -----cc----chhhh--------------------------------hhc-CCCC---------------------CCh
Q 008274 473 -----YD----TFYTE--------------------------------KYM-GLPS---------------------EDP 489 (571)
Q Consensus 473 -----~~----~~~~~--------------------------------~~~-g~~~---------------------~~~ 489 (571)
+. ..|.. .++ ..+. ...
T Consensus 153 ~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 232 (587)
T 3i2k_A 153 GPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDND 232 (587)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCCSCC
T ss_pred ecCCccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCCCCC
Confidence 00 00100 000 0110 011
Q ss_pred hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC---------CCCcHH---
Q 008274 490 VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR---------RHRDRI--- 557 (571)
Q Consensus 490 ~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~---------~~~~~~--- 557 (571)
+.|...++...+++|++|+|+++|..|..+ ..+.+++++|+..++ .++++-|. .|... .+....
T Consensus 233 ~yw~~~s~~~~l~~I~vPvL~v~Gw~D~~~--~~~~~~~~~l~~~~~-~~L~iGPw-~H~~~~~~~g~~~~g~~~~~~~~ 308 (587)
T 3i2k_A 233 ESWQSISLFERLGGLATPALITAGWYDGFV--GESLRTFVAVKDNAD-ARLVVGPW-SHSNLTGRNADRKFGIAATYPIQ 308 (587)
T ss_dssp HHHHTTCCHHHHTTCCCCEEEEEEEECTTH--HHHHHHHHHHTTTSC-EEEEEEEE-ETTBCSSEETTEECCGGGSCCHH
T ss_pred hHHhcCChhhhhccCCCCEEEEccCCCccc--hHHHHHHHHHhhcCC-CEEEECCc-cccCccccCCCcccCCccccccc
Confidence 234556777789999999999999999864 457788888876654 36666665 46521 111112
Q ss_pred HHHHHHHHHHHHhC
Q 008274 558 YMEERIWEFIERTL 571 (571)
Q Consensus 558 ~~~~~i~~fl~~~l 571 (571)
+..+.+++||+++|
T Consensus 309 ~~~~~~~~wFD~~L 322 (587)
T 3i2k_A 309 EATTMHKAFFDRHL 322 (587)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHh
Confidence 23378999999886
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-20 Score=186.12 Aligned_cols=218 Identities=14% Similarity=0.096 Sum_probs=138.6
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeec-------ccccccch----hhhHHHHhCCcEE
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVC-------DSWINTVD----MRAQYLRSKGILV 386 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~-------~~~~~~~~----~~~~~l~~~G~~v 386 (571)
..+.+.+++.+|..++++++.|++. .++.|+||++||.++..... ..+...+. .+++.|+++||+|
T Consensus 86 ~~e~v~~~~~~g~~l~~~l~~P~~~---~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~V 162 (391)
T 3g8y_A 86 ILEKWEFYPFPKSVSTFLVLKPEHL---KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVA 162 (391)
T ss_dssp EEEEEEECCSTTCCEEEEEEEETTC---CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEE
T ss_pred EEEEEEEEcCCCCEEEEEEEeCCCC---CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEE
Confidence 4577888888999999999999763 26789999999976543200 00111112 4688999999999
Q ss_pred EEECCCCCCCChhhhH--------H-HHh---ccCCCC----CchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHH
Q 008274 387 WKLDNRGTARRGLKFE--------A-SIK---HNCGRI----DAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAIT 450 (571)
Q Consensus 387 ~~~d~rG~~~~~~~~~--------~-~~~---~~~~~~----~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 450 (571)
+++|+||+|.++.... . ... ...+.. ...|+.++++++.+++.+|.+||+|+||||||++++.+
T Consensus 163 l~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~ 242 (391)
T 3g8y_A 163 VAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVL 242 (391)
T ss_dssp EECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHH
Confidence 9999999987753210 0 000 001111 13788999999999988999999999999999999988
Q ss_pred HhcCCCeeEEEEEcCccCCcccccchhhh-hhcC-CCC------CChhhhccCCcchhhccCC-CcEEEEecCCCCCCCh
Q 008274 451 LARFPDVFQCAVSGAPVTSWDGYDTFYTE-KYMG-LPS------EDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDENVHF 521 (571)
Q Consensus 451 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~g-~~~------~~~~~~~~~s~~~~~~~~~-~p~lli~G~~D~~v~~ 521 (571)
++. +++++++|+.+++..+......... ...+ .+. ..+......+....+..+. .|+|++||+.|.++
T Consensus 243 a~~-~~~i~a~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~d~~~~~~~~ap~P~LiihG~~D~~v-- 319 (391)
T 3g8y_A 243 GVL-DKDIYAFVYNDFLCQTQERAVVMTKPDKENRRPFPNSIRHLIPGYWRYFNFPDVVASLAPRPIIFTEGGLDRDF-- 319 (391)
T ss_dssp HHH-CTTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGCCTTGGGTCCHHHHHHTTTTSCEEECSCBCHHHH--
T ss_pred HHc-CCceeEEEEccCCCCcccchhhcccccccccccccccHHHhCccHHhhCCHHHHHHhhcCCCEEEEcCCccHHH--
Confidence 885 5678898888887776322111000 0000 000 0011122223333334343 59999999999987
Q ss_pred HHHHHHHHHHHHcCC--CeeEEEcC
Q 008274 522 RHTARLINALVAARK--PYEILIFP 544 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~--~~~~~~~~ 544 (571)
+. +.+.++..+. ++++..+|
T Consensus 320 ~~---~~~~~~~~g~~~~~~~~~~~ 341 (391)
T 3g8y_A 320 RL---VQSAYAASGKPENAEFHHYP 341 (391)
T ss_dssp HH---HHHHHHHTTCGGGEEECCCG
T ss_pred HH---HHHHHHHcCCCceeEEEEeC
Confidence 33 3444445554 44444444
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.5e-19 Score=172.04 Aligned_cols=207 Identities=13% Similarity=0.068 Sum_probs=139.3
Q ss_pred CCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc---cchhhhHHHHhC----CcEEE
Q 008274 315 QLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN---TVDMRAQYLRSK----GILVW 387 (571)
Q Consensus 315 ~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~---~~~~~~~~l~~~----G~~v~ 387 (571)
...+.+.+++.+.++ .+.+++|.|+++. ..+++|+|+++||+++... .|.. .....++.|+++ +++|+
T Consensus 37 ~~g~~~~~~~~s~~~-~~~~~vy~P~~~~-~~~~~Pvlv~lHG~~~~~~---~~~~~~~~~~~~~~~l~~~g~~~~~ivv 111 (297)
T 1gkl_A 37 QAGRIVKETYTGING-TKSLNVYLPYGYD-PNKKYNIFYLMHGGGENEN---TIFSNDVKLQNILDHAIMNGELEPLIVV 111 (297)
T ss_dssp SCCEEEEEEEEETTE-EEEEEEEECTTCC-TTSCCEEEEEECCTTCCTT---STTSTTTCHHHHHHHHHHTTSSCCEEEE
T ss_pred CCceEEEEEEEcCCC-EEEEEEEeCCCCC-CCCCCCEEEEECCCCCCcc---hhhcccchHHHHHHHHHHcCCCCCEEEE
Confidence 345667888888776 8999999998863 2468999999999877532 3321 233446667666 59999
Q ss_pred EECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC------------CcCCcEEEEeechHHHHHHHHHhcCC
Q 008274 388 KLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL------------AKVGHIGLYGWSYGGYLSAITLARFP 455 (571)
Q Consensus 388 ~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~------------~d~~~i~l~G~S~GG~~a~~~~~~~~ 455 (571)
++|++|....+..+.... .+|+. .++.+... .|+.+++|+|+||||++++.+++++|
T Consensus 112 ~pd~~~~~~~~~~~~~~~--------~~~l~---~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p 180 (297)
T 1gkl_A 112 TPTFNGGNCTAQNFYQEF--------RQNVI---PFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCL 180 (297)
T ss_dssp ECCSCSTTCCTTTHHHHH--------HHTHH---HHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHT
T ss_pred EecCcCCccchHHHHHHH--------HHHHH---HHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCc
Confidence 999997543333332211 23344 34443321 36778999999999999999999999
Q ss_pred CeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC
Q 008274 456 DVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR 535 (571)
Q Consensus 456 ~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~ 535 (571)
++|+++++.+|...+.... .. ....+...-....+.....++++.+|+.|.. ..++.++.++|++++
T Consensus 181 ~~f~~~v~~sg~~~~~~~~--~~---------~~~~~~~~~~~~~~~~~~~~l~~~~G~~D~~--~~~~~~l~~~L~~~g 247 (297)
T 1gkl_A 181 DYVAYFMPLSGDYWYGNSP--QD---------KANSIAEAINRSGLSKREYFVFAATGSEDIA--YANMNPQIEAMKALP 247 (297)
T ss_dssp TTCCEEEEESCCCCBSSSH--HH---------HHHHHHHHHHHHTCCTTSCEEEEEEETTCTT--HHHHHHHHHHHHTST
T ss_pred hhhheeeEeccccccCCcc--ch---------hhhHHHHHHhhccCCcCcEEEEEEeCCCccc--chhHHHHHHHHHHcC
Confidence 9999999999976543210 00 0000000000001112234567778999976 468889999999988
Q ss_pred ----------CCeeEEEcCCCCCCC
Q 008274 536 ----------KPYEILIFPDERHMP 550 (571)
Q Consensus 536 ----------~~~~~~~~~~~~H~~ 550 (571)
+++++.++|+++|.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 248 HFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp TCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred CccccccccCCceEEEECCCCCcCH
Confidence 599999999999975
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5.7e-19 Score=181.36 Aligned_cols=215 Identities=15% Similarity=0.115 Sum_probs=144.7
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhh
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK 400 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~ 400 (571)
.+.+...+|..+++.... ..|+||++||++++.. .|..++..|+++||.|+++|+||+|.+...
T Consensus 5 ~~~~~~~dG~~l~y~~~G---------~gp~VV~lHG~~~~~~-------~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~ 68 (456)
T 3vdx_A 5 TVGQENSTSIDLYYEDHG---------TGVPVVLIHGFPLSGH-------SWERQSAALLDAGYRVITYDRRGFGQSSQP 68 (456)
T ss_dssp EEEEETTEEEEEEEEEES---------SSEEEEEECCTTCCGG-------GGTTHHHHHHHHTEEEEEECCTTSTTSCCC
T ss_pred eecccccCCeEEEEEEeC---------CCCEEEEECCCCCcHH-------HHHHHHHHHHHCCcEEEEECCCCCCCCCCC
Confidence 455566778777755432 2388999999877643 244568889899999999999999877532
Q ss_pred hHHHHhccCCCCCc----hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-CCeeEEEEEcCccCCccccc-
Q 008274 401 FEASIKHNCGRIDA----EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWDGYD- 474 (571)
Q Consensus 401 ~~~~~~~~~~~~~~----~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-~~~~~~~v~~~~~~~~~~~~- 474 (571)
. ..... +|+.++++++ +.++++++|||+||.+++.+++++ |++++++++.+|........
T Consensus 69 ~--------~~~s~~~~a~dl~~~l~~l------~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~ 134 (456)
T 3vdx_A 69 T--------TGYDYDTFAADLNTVLETL------DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTD 134 (456)
T ss_dssp S--------SCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCS
T ss_pred C--------CCCCHHHHHHHHHHHHHHh------CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCccccccccc
Confidence 1 11223 3444444444 456899999999999999888876 89999999998866421100
Q ss_pred ---------------------------chhhhhhcCCCCC-----Chhhh---------------------ccCCcchhh
Q 008274 475 ---------------------------TFYTEKYMGLPSE-----DPVGY---------------------EYSSVMHHV 501 (571)
Q Consensus 475 ---------------------------~~~~~~~~g~~~~-----~~~~~---------------------~~~s~~~~~ 501 (571)
..+...+...... ..+.+ ...+....+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l 214 (456)
T 3vdx_A 135 DNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADI 214 (456)
T ss_dssp SCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTS
T ss_pred ccccccchHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHh
Confidence 0000011111000 00000 011333456
Q ss_pred ccCCCcEEEEecCCCCCCChH-HHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 502 HKMKGKLLLVHGMIDENVHFR-HTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 502 ~~~~~p~lli~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.++++|+|+++|++|..++++ ....+.+. ..++++++++++||.+. .++...+.+.+.+||+++
T Consensus 215 ~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~----~~~~~~~~i~gagH~~~-~e~p~~v~~~I~~FL~~~ 279 (456)
T 3vdx_A 215 PRIDVPALILHGTGDRTLPIENTARVFHKA----LPSAEYVEVEGAPHGLL-WTHAEEVNTALLAFLAKA 279 (456)
T ss_dssp TTCCSCCEEEEETTCSSSCGGGTHHHHHHH----CTTSEEEEETTCCSCTT-TTTHHHHHHHHHHHHHHH
T ss_pred hhCCCCEEEEEeCCCCCcCHHHHHHHHHHH----CCCceEEEeCCCCCcch-hhCHHHHHHHHHHHHHHh
Confidence 778899999999999999988 44444443 35789999999999874 477889999999999875
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-19 Score=170.72 Aligned_cols=214 Identities=14% Similarity=0.110 Sum_probs=142.0
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.+|..+++..+.|.+ .+.|.||++||.+.+.. .|..++..|++ +|.|+++|+||+|.+....
T Consensus 9 ~~g~~l~y~~~g~~~-----~~~~~vvllHG~~~~~~-------~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~----- 70 (266)
T 2xua_A 9 VNGTELHYRIDGERH-----GNAPWIVLSNSLGTDLS-------MWAPQVAALSK-HFRVLRYDTRGHGHSEAPK----- 70 (266)
T ss_dssp CSSSEEEEEEESCSS-----SCCCEEEEECCTTCCGG-------GGGGGHHHHHT-TSEEEEECCTTSTTSCCCS-----
T ss_pred ECCEEEEEEEcCCcc-----CCCCeEEEecCccCCHH-------HHHHHHHHHhc-CeEEEEecCCCCCCCCCCC-----
Confidence 378888888776532 12478999999766533 34455777765 5999999999999875321
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc---cc--------
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY---DT-------- 475 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~---~~-------- 475 (571)
....++++.+.+..+.+.- ..+++.++||||||.+++.++.++|++++++|+.++....... ..
T Consensus 71 ---~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 145 (266)
T 2xua_A 71 ---GPYTIEQLTGDVLGLMDTL--KIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTE 145 (266)
T ss_dssp ---SCCCHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHhc--CCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhc
Confidence 1123444444444444432 3458999999999999999999999999999998765432100 00
Q ss_pred ---hhh----hhhcCC------CC-----------CChhh-------hccCCcchhhccCCCcEEEEecCCCCCCChHHH
Q 008274 476 ---FYT----EKYMGL------PS-----------EDPVG-------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHT 524 (571)
Q Consensus 476 ---~~~----~~~~g~------~~-----------~~~~~-------~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~ 524 (571)
... ..++.. +. ..... ....+....+.++++|+|+++|++|..++++.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 225 (266)
T 2xua_A 146 GMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQG 225 (266)
T ss_dssp CHHHHHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHH
T ss_pred ChHHHHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHH
Confidence 000 000000 00 00000 111223345677899999999999999999888
Q ss_pred HHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 525 ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 525 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
..+.+.+ .+.++++++ +||.+ ..++...+.+.+.+||++
T Consensus 226 ~~~~~~~----~~~~~~~~~-~gH~~-~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 226 RELAQAI----AGARYVELD-ASHIS-NIERADAFTKTVVDFLTE 264 (266)
T ss_dssp HHHHHHS----TTCEEEEES-CCSSH-HHHTHHHHHHHHHHHHTC
T ss_pred HHHHHhC----CCCEEEEec-CCCCc-hhcCHHHHHHHHHHHHHh
Confidence 8777665 456899999 99987 345577889999999864
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7.4e-19 Score=169.88 Aligned_cols=217 Identities=19% Similarity=0.211 Sum_probs=136.7
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|..+.+..+.+. .+.|.||++||++++.. .| +.. ...+++.||.|+++|+||+|.+.... . .
T Consensus 13 ~g~~l~~~~~g~~------~~~~~vvllHG~~~~~~---~~---~~~-~~~l~~~g~~vi~~D~~G~G~S~~~~-~---~ 75 (293)
T 1mtz_A 13 NGIYIYYKLCKAP------EEKAKLMTMHGGPGMSH---DY---LLS-LRDMTKEGITVLFYDQFGCGRSEEPD-Q---S 75 (293)
T ss_dssp TTEEEEEEEECCS------SCSEEEEEECCTTTCCS---GG---GGG-GGGGGGGTEEEEEECCTTSTTSCCCC-G---G
T ss_pred CCEEEEEEEECCC------CCCCeEEEEeCCCCcch---hH---HHH-HHHHHhcCcEEEEecCCCCccCCCCC-C---C
Confidence 6777777666431 12367888999766532 22 122 23456789999999999999875322 0 0
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-----------c-
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-----------T- 475 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-----------~- 475 (571)
...++++.+.+..+.+.- .+.+++.|+||||||.+++.++.++|++++++|+.+|........ .
T Consensus 76 ---~~~~~~~~~dl~~~~~~l-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (293)
T 1mtz_A 76 ---KFTIDYGVEEAEALRSKL-FGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAK 151 (293)
T ss_dssp ---GCSHHHHHHHHHHHHHHH-HTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHH
T ss_pred ---cccHHHHHHHHHHHHHHh-cCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHH
Confidence 012333333333333321 022589999999999999999999999999999988865421000 0
Q ss_pred ---h---------------------hhhhhcC--CCCCCh--hh---------h---------------ccCCcchhhcc
Q 008274 476 ---F---------------------YTEKYMG--LPSEDP--VG---------Y---------------EYSSVMHHVHK 503 (571)
Q Consensus 476 ---~---------------------~~~~~~g--~~~~~~--~~---------~---------------~~~s~~~~~~~ 503 (571)
. +...+.. .+.... .. + ...+....+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 231 (293)
T 1mtz_A 152 YRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISA 231 (293)
T ss_dssp HHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGG
T ss_pred HHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhcc
Confidence 0 0000000 000000 00 0 01122334677
Q ss_pred CCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 504 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 504 ~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+++|+|+++|++| .+++..+..+.+.+ .+.++++++++||.+ ..++...+.+.+.+||.++|
T Consensus 232 i~~P~lii~G~~D-~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~~l 293 (293)
T 1mtz_A 232 IKIPTLITVGEYD-EVTPNVARVIHEKI----AGSELHVFRDCSHLT-MWEDREGYNKLLSDFILKHL 293 (293)
T ss_dssp CCSCEEEEEETTC-SSCHHHHHHHHHHS----TTCEEEEETTCCSCH-HHHSHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEeeCCC-CCCHHHHHHHHHhC----CCceEEEeCCCCCCc-cccCHHHHHHHHHHHHHhcC
Confidence 8899999999999 67777777766654 467999999999987 33567889999999998865
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.1e-19 Score=176.03 Aligned_cols=243 Identities=15% Similarity=0.161 Sum_probs=151.3
Q ss_pred CeEEEEEcCC--C--cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc-cchhhhHHHH-hCCcEEEEECCC
Q 008274 319 PDIVQIQAND--G--TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN-TVDMRAQYLR-SKGILVWKLDNR 392 (571)
Q Consensus 319 ~~~~~~~~~d--g--~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~-~~~~~~~~l~-~~G~~v~~~d~r 392 (571)
..++.+.+.| | ..+.++++.|.+. .++.|+|++.||.........++.. .....+..|+ ++||+|+++|+|
T Consensus 43 ~~~i~Y~s~d~~G~~~~~~g~l~~P~~~---~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~r 119 (377)
T 4ezi_A 43 LYKINYKTQSPDGNLTIASGLVAMPIHP---VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYL 119 (377)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEESSC---SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCT
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCCC---CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCC
Confidence 4456666544 4 4588999999863 2578999999997642211111100 0112356678 999999999999
Q ss_pred CCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCC----C-eeEEEEEcCc
Q 008274 393 GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFP----D-VFQCAVSGAP 466 (571)
Q Consensus 393 G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~----~-~~~~~v~~~~ 466 (571)
|+|.++...............+.|...++..+.+. +..+.++++++|||+||+++++++..+| + .+.++++.++
T Consensus 120 G~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~ 199 (377)
T 4ezi_A 120 GLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSA 199 (377)
T ss_dssp TSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESC
T ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCc
Confidence 99887641110000000001133444444444443 3336789999999999999999987654 3 5788888888
Q ss_pred cCCcccccc--------------h------------h--hhhhcC-----------------------CCCCChhhh---
Q 008274 467 VTSWDGYDT--------------F------------Y--TEKYMG-----------------------LPSEDPVGY--- 492 (571)
Q Consensus 467 ~~~~~~~~~--------------~------------~--~~~~~g-----------------------~~~~~~~~~--- 492 (571)
+.+...... . | .+.++. .+ .....+
T Consensus 200 p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 278 (377)
T 4ezi_A 200 PYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALP-QDPLLIFQP 278 (377)
T ss_dssp CCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSC-SSGGGGBCH
T ss_pred ccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccC-CCHHHHhch
Confidence 776431100 0 0 000000 00 000000
Q ss_pred --c-----cCCc-chh--------hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCC--CCCCCCCCC
Q 008274 493 --E-----YSSV-MHH--------VHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD--ERHMPRRHR 554 (571)
Q Consensus 493 --~-----~~s~-~~~--------~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~~~~~~ 554 (571)
. ..+| +.. -..+++|+||+||+.|.+||+.++.++++++++.|. +++++|++ .+|...
T Consensus 279 ~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H~~~--- 354 (377)
T 4ezi_A 279 KFSNGIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDHVQA--- 354 (377)
T ss_dssp HHHHHHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCTTTT---
T ss_pred hhhhhcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCccCh---
Confidence 0 0111 110 113467999999999999999999999999999999 99999999 899763
Q ss_pred cHHHHHHHHHHHHHHh
Q 008274 555 DRIYMEERIWEFIERT 570 (571)
Q Consensus 555 ~~~~~~~~i~~fl~~~ 570 (571)
.......+++||+++
T Consensus 355 -~~~~~~~~~~wl~~~ 369 (377)
T 4ezi_A 355 -HPFVLKEQVDFFKQF 369 (377)
T ss_dssp -HHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHh
Confidence 345678889999875
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-19 Score=178.20 Aligned_cols=244 Identities=15% Similarity=0.112 Sum_probs=153.5
Q ss_pred EEEEEcCCCcEE----EEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccc------cccchhhh---HHHHhCCcEEE
Q 008274 321 IVQIQANDGTVL----YGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW------INTVDMRA---QYLRSKGILVW 387 (571)
Q Consensus 321 ~~~~~~~dg~~l----~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~------~~~~~~~~---~~l~~~G~~v~ 387 (571)
...++..+|..+ ++..+.+.+. .+.|+||++||.+++......+ ...|..++ +.|.+.||.|+
T Consensus 14 ~~~~~~~~g~~l~~~i~y~~~g~~~~----~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi 89 (377)
T 3i1i_A 14 LKEYTFENGRTIPVQMGYETYGTLNR----ERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVI 89 (377)
T ss_dssp EEEEECTTSCEEEEEEEEEEESCCCT----TCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEE
T ss_pred ecceeecCCCEeeeeEEEEeecccCC----CCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEE
Confidence 345666676555 4444443321 3458999999987764421110 01123333 56678899999
Q ss_pred EECCCCCCCCh-----hhhHHHHh--------ccCCCCCchhHHHHHHHHHHcCCCcCCcEE-EEeechHHHHHHHHHhc
Q 008274 388 KLDNRGTARRG-----LKFEASIK--------HNCGRIDAEDQLTGAEWLIKQGLAKVGHIG-LYGWSYGGYLSAITLAR 453 (571)
Q Consensus 388 ~~d~rG~~~~~-----~~~~~~~~--------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~-l~G~S~GG~~a~~~~~~ 453 (571)
++|+||+|.+. ..-..... ..+....++|+.+.+..+++.- +.+++. |+||||||.+++.++.+
T Consensus 90 ~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l--~~~~~~ilvGhS~Gg~ia~~~a~~ 167 (377)
T 3i1i_A 90 CTDNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDM--GIARLHAVMGPSAGGMIAQQWAVH 167 (377)
T ss_dssp EECCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT--TCCCBSEEEEETHHHHHHHHHHHH
T ss_pred EecccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHc--CCCcEeeEEeeCHhHHHHHHHHHH
Confidence 99999885421 00000000 0112345677777777776653 345775 99999999999999999
Q ss_pred CCCeeEEEEE-cCccCCcccc--------------cc-------------------------------hhhhhhcCCCCC
Q 008274 454 FPDVFQCAVS-GAPVTSWDGY--------------DT-------------------------------FYTEKYMGLPSE 487 (571)
Q Consensus 454 ~~~~~~~~v~-~~~~~~~~~~--------------~~-------------------------------~~~~~~~g~~~~ 487 (571)
+|++++++|+ .++....... .. .+...+......
T Consensus 168 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (377)
T 3i1i_A 168 YPHMVERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIE 247 (377)
T ss_dssp CTTTBSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSC
T ss_pred ChHHHHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhcc
Confidence 9999999998 6654431000 00 000000000000
Q ss_pred C-----------hhhh------------------------c-------cCCcchhhccCCCcEEEEecCCCCCCChHHHH
Q 008274 488 D-----------PVGY------------------------E-------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTA 525 (571)
Q Consensus 488 ~-----------~~~~------------------------~-------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~ 525 (571)
. .+.+ . ..+....+.++++|+|+++|++|..++++.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~ 327 (377)
T 3i1i_A 248 VEPYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNY 327 (377)
T ss_dssp CGGGTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHH
T ss_pred ccccccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHH
Confidence 0 0000 0 01113346778999999999999999999999
Q ss_pred HHHHHHHHcCCCeeEEEcCC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 526 RLINALVAARKPYEILIFPD-ERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 526 ~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.+++.+++.+.+++++++++ +||... .++.+.+.+.|.+||++++
T Consensus 328 ~~~~~~~~~g~~~~~~~i~~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 328 KMVDLLQKQGKYAEVYEIESINGHMAG-VFDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp HHHHHHHHTTCCEEECCBCCTTGGGHH-HHCGGGTHHHHHHHHHSCC
T ss_pred HHHHHHHhcCCCceEEEcCCCCCCcch-hcCHHHHHHHHHHHHHhhh
Confidence 99999988888899999998 999762 3456778899999998764
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.80 E-value=9e-19 Score=172.46 Aligned_cols=227 Identities=15% Similarity=0.185 Sum_probs=140.1
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCCh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRG 398 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~ 398 (571)
+...++. +|.++++..+.|+.. + .+.+.||++||++++.. .|. .....|++ .||.|+++|+||+|.+.
T Consensus 29 ~~~~v~~-~g~~l~y~~~G~~~~--~-~~g~plvllHG~~~~~~---~w~----~~~~~l~~~~~~~Via~D~rG~G~S~ 97 (330)
T 3nwo_A 29 SSRTVPF-GDHETWVQVTTPENA--Q-PHALPLIVLHGGPGMAH---NYV----ANIAALADETGRTVIHYDQVGCGNST 97 (330)
T ss_dssp CEEEEEE-TTEEEEEEEECCSSC--C-TTCCCEEEECCTTTCCS---GGG----GGGGGHHHHHTCCEEEECCTTSTTSC
T ss_pred cceeEee-cCcEEEEEEecCccC--C-CCCCcEEEECCCCCCch---hHH----HHHHHhccccCcEEEEECCCCCCCCC
Confidence 3344444 678898888877431 0 11124677899877643 332 23445554 69999999999999875
Q ss_pred hhhHHHHhccCC-CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc---
Q 008274 399 LKFEASIKHNCG-RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD--- 474 (571)
Q Consensus 399 ~~~~~~~~~~~~-~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--- 474 (571)
...... ...+. ....+|+.+.++.+ ..+++.|+||||||.+++.++.++|+++.++|+.++......+.
T Consensus 98 ~~~~~~-~~~~~~~~~a~dl~~ll~~l------g~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 170 (330)
T 3nwo_A 98 HLPDAP-ADFWTPQLFVDEFHAVCTAL------GIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAA 170 (330)
T ss_dssp CCTTSC-GGGCCHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHH
T ss_pred CCCCCc-cccccHHHHHHHHHHHHHHc------CCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHH
Confidence 310000 00000 00134444555444 34689999999999999999999999999988876643211000
Q ss_pred --------------------------ch-------hhhhhcCCCCCChh-----------------------------hh
Q 008274 475 --------------------------TF-------YTEKYMGLPSEDPV-----------------------------GY 492 (571)
Q Consensus 475 --------------------------~~-------~~~~~~g~~~~~~~-----------------------------~~ 492 (571)
.. +...........+. ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (330)
T 3nwo_A 171 GDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTL 250 (330)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGG
T ss_pred HHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccc
Confidence 00 00000000000000 00
Q ss_pred ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 493 EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 493 ~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
...+....+.+|++|+|+++|++|..+| .....+.+. -.+.+++++|++||.+ ..+..+.+.+.+.+||+++
T Consensus 251 ~~~~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~----ip~~~~~~i~~~gH~~-~~e~p~~~~~~i~~FL~~~ 322 (330)
T 3nwo_A 251 GDWSVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDH----IPDVRSHVFPGTSHCT-HLEKPEEFRAVVAQFLHQH 322 (330)
T ss_dssp GGCBCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHH----CSSEEEEEETTCCTTH-HHHSHHHHHHHHHHHHHHH
T ss_pred cCCchhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHh----CCCCcEEEeCCCCCch-hhcCHHHHHHHHHHHHHhc
Confidence 1112234567789999999999999875 445555444 3678999999999987 4467888999999999864
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.80 E-value=8.7e-19 Score=167.88 Aligned_cols=215 Identities=13% Similarity=0.042 Sum_probs=142.0
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
+...+.. +|..+.+..+.|. +.|+||++||.+++.. .|..++..|+++||.|+++|+||+|.+..
T Consensus 5 ~~~~~~~-~g~~l~~~~~g~~-------~~~~vv~~hG~~~~~~-------~~~~~~~~l~~~G~~v~~~d~~G~G~s~~ 69 (286)
T 3qit_A 5 EEKFLEF-GGNQICLCSWGSP-------EHPVVLCIHGILEQGL-------AWQEVALPLAAQGYRVVAPDLFGHGRSSH 69 (286)
T ss_dssp EEEEEEE-TTEEEEEEEESCT-------TSCEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCC
T ss_pred hhheeec-CCceEEEeecCCC-------CCCEEEEECCCCcccc-------hHHHHHHHhhhcCeEEEEECCCCCCCCCC
Confidence 4455555 7888998888653 3478999999877643 34557889999999999999999987753
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-c---
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-T--- 475 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-~--- 475 (571)
.... ......+..+.+..+++.- +.+++.++|||+||.+++.++.++|++++++|+.+|........ .
T Consensus 70 ~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 141 (286)
T 3qit_A 70 LEMV------TSYSSLTFLAQIDRVIQEL--PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAV 141 (286)
T ss_dssp CSSG------GGCSHHHHHHHHHHHHHHS--CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHH
T ss_pred CCCC------CCcCHHHHHHHHHHHHHhc--CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhh
Confidence 2210 1123455555555555542 44789999999999999999999999999999998865432111 0
Q ss_pred -hhhh--hhc-C--------------------CCCCChh---hh---------------------------------ccC
Q 008274 476 -FYTE--KYM-G--------------------LPSEDPV---GY---------------------------------EYS 495 (571)
Q Consensus 476 -~~~~--~~~-g--------------------~~~~~~~---~~---------------------------------~~~ 495 (571)
.+.. ..+ . .+....+ .+ ...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (286)
T 3qit_A 142 NQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRS 221 (286)
T ss_dssp HHHHHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHH
T ss_pred HHHHHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchh
Confidence 0000 000 0 0000000 00 111
Q ss_pred CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHH
Q 008274 496 SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERI 563 (571)
Q Consensus 496 s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i 563 (571)
+....+.++++|+|+++|++|..++++....+.+.+ .+++++++++ ||.+. .++...+.+.|
T Consensus 222 ~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~g-gH~~~-~e~p~~~~~~i 283 (286)
T 3qit_A 222 QYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTM----TQAKRVFLSG-GHNLH-IDAAAALASLI 283 (286)
T ss_dssp HHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHS----TTSEEEEESS-SSCHH-HHTHHHHHHHH
T ss_pred HHHHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHC----CCCeEEEeeC-CchHh-hhChHHHHHHh
Confidence 222345678999999999999999999888877665 4678999999 99862 23444444433
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-19 Score=182.57 Aligned_cols=234 Identities=15% Similarity=0.116 Sum_probs=150.1
Q ss_pred EEEEcCCCcEEEEEEEcCCCC--CCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH----hCCc---EEEEECCC
Q 008274 322 VQIQANDGTVLYGALYKPDES--RYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR----SKGI---LVWKLDNR 392 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~--~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~----~~G~---~v~~~d~r 392 (571)
..+...||..+.+..+.|.+. ....++.|+||++||.+++.. . |..++..|+ +.|| .|+++|+|
T Consensus 23 ~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~---~----~~~~~~~L~~~~~~~G~~~~~vi~~D~~ 95 (398)
T 2y6u_A 23 STLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKV---V----WEYYLPRLVAADAEGNYAIDKVLLIDQV 95 (398)
T ss_dssp SBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGG---G----GGGGGGGSCCCBTTTTEEEEEEEEECCT
T ss_pred ccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHH---H----HHHHHHHHHHhhhhcCcceeEEEEEcCC
Confidence 345567899999999988641 011134689999999877643 2 344566777 4589 99999999
Q ss_pred CCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-C---CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 393 GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-G---LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 393 G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~---~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
|+|.+...... .......+.+..+.+..+++. . .++..+++|+||||||.+++.++.++|++++++|+.+|..
T Consensus 96 G~G~S~~~~~~---~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 172 (398)
T 2y6u_A 96 NHGDSAVRNRG---RLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVV 172 (398)
T ss_dssp TSHHHHHHTTT---TBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCC
T ss_pred CCCCCCCCCcc---ccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccc
Confidence 98866432100 000112233333333333222 1 1344459999999999999999999999999999988865
Q ss_pred Cccc---------------ccchhhh-----------------hhc---C-CCCCChh---hhc----------------
Q 008274 469 SWDG---------------YDTFYTE-----------------KYM---G-LPSEDPV---GYE---------------- 493 (571)
Q Consensus 469 ~~~~---------------~~~~~~~-----------------~~~---g-~~~~~~~---~~~---------------- 493 (571)
.... ....+.. .++ . .....++ .+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (398)
T 2y6u_A 173 ITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGP 252 (398)
T ss_dssp SCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CC
T ss_pred ccccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCc
Confidence 4310 0000000 000 0 0000000 000
Q ss_pred --------------------cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCC
Q 008274 494 --------------------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH 553 (571)
Q Consensus 494 --------------------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 553 (571)
.......+.++++|+|+++|++|..++++.+..+.+.+ .++++++++++||.+. .
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~----~~~~~~~~~~~gH~~~-~ 327 (398)
T 2y6u_A 253 VRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTL----QNYHLDVIPGGSHLVN-V 327 (398)
T ss_dssp EEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHC----SSEEEEEETTCCTTHH-H
T ss_pred eEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhC----CCceEEEeCCCCccch-h
Confidence 00112356778999999999999999999888777665 4689999999999863 3
Q ss_pred CcHHHHHHHHHHHHHHh
Q 008274 554 RDRIYMEERIWEFIERT 570 (571)
Q Consensus 554 ~~~~~~~~~i~~fl~~~ 570 (571)
+....+.+.+.+||.++
T Consensus 328 e~p~~~~~~i~~fl~~~ 344 (398)
T 2y6u_A 328 EAPDLVIERINHHIHEF 344 (398)
T ss_dssp HSHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHH
Confidence 56788899999999875
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.9e-19 Score=168.03 Aligned_cols=216 Identities=13% Similarity=0.090 Sum_probs=141.5
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhh
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK 400 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~ 400 (571)
...++. +|..+.+.... +.|+||++||.+++.. .| ..+++.|++ ||.|+++|+||+|.+...
T Consensus 5 ~~~~~~-~~~~~~y~~~g---------~~~~vv~~HG~~~~~~---~~----~~~~~~L~~-~~~vi~~d~~G~G~s~~~ 66 (278)
T 3oos_A 5 TNIIKT-PRGKFEYFLKG---------EGPPLCVTHLYSEYND---NG----NTFANPFTD-HYSVYLVNLKGCGNSDSA 66 (278)
T ss_dssp EEEEEE-TTEEEEEEEEC---------SSSEEEECCSSEECCT---TC----CTTTGGGGG-TSEEEEECCTTSTTSCCC
T ss_pred cCcEec-CCceEEEEecC---------CCCeEEEEcCCCcchH---HH----HHHHHHhhc-CceEEEEcCCCCCCCCCC
Confidence 344444 55567655432 2367899999766543 23 334667777 999999999999877532
Q ss_pred hHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc------
Q 008274 401 FEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD------ 474 (571)
Q Consensus 401 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~------ 474 (571)
... .....+++.+.+..+.+.- +.+++.++|||+||.+++.++.++|++++++|+.+|........
T Consensus 67 ~~~------~~~~~~~~~~~~~~~~~~l--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~ 138 (278)
T 3oos_A 67 KND------SEYSMTETIKDLEAIREAL--YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIY 138 (278)
T ss_dssp SSG------GGGSHHHHHHHHHHHHHHT--TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTT
T ss_pred CCc------ccCcHHHHHHHHHHHHHHh--CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhh
Confidence 100 1112455555555555542 44689999999999999999999999999999998876510000
Q ss_pred -----------ch------------------------------hhhhhcCCCCCCh------h-----hhccCCcchhhc
Q 008274 475 -----------TF------------------------------YTEKYMGLPSEDP------V-----GYEYSSVMHHVH 502 (571)
Q Consensus 475 -----------~~------------------------------~~~~~~g~~~~~~------~-----~~~~~s~~~~~~ 502 (571)
.. ....++..+.... . .+...+....+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (278)
T 3oos_A 139 CSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLK 218 (278)
T ss_dssp STTSTTHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHT
T ss_pred hhhchhHHHHHHHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHh
Confidence 00 0000111111000 0 111233445677
Q ss_pred cCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 503 KMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 503 ~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
++++|+|+++|++|..++++.+..+.+.+ .++++++++++||.+ ..++...+.+.+.+||
T Consensus 219 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~-~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 219 FVKIPSFIYCGKHDVQCPYIFSCEIANLI----PNATLTKFEESNHNP-FVEEIDKFNQFVNDTL 278 (278)
T ss_dssp TCCSCEEEEEETTCSSSCHHHHHHHHHHS----TTEEEEEETTCSSCH-HHHSHHHHHHHHHHTC
T ss_pred CCCCCEEEEEeccCCCCCHHHHHHHHhhC----CCcEEEEcCCcCCCc-ccccHHHHHHHHHhhC
Confidence 88999999999999999999888887765 568999999999987 3356667777776664
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.7e-19 Score=167.91 Aligned_cols=204 Identities=13% Similarity=0.030 Sum_probs=137.2
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
+..|+||++||.+++.. .|...+..|+++||.|+++|+||+|.+..... ....+.+..+.+..+++
T Consensus 10 ~~~~~vvllHG~~~~~~-------~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~l~ 75 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAW-------CWYKIVALMRSSGHNVTALDLGASGINPKQAL-------QIPNFSDYLSPLMEFMA 75 (267)
T ss_dssp CCCCEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCcc-------hHHHHHHHHHhcCCeEEEeccccCCCCCCcCC-------ccCCHHHHHHHHHHHHH
Confidence 45689999999876643 34567888999999999999999988764311 01234555555555554
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc------------hhh----------------
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT------------FYT---------------- 478 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~------------~~~---------------- 478 (571)
.-. +.+++.|+|||+||.+++.++.++|++++++|+.++......... .+.
T Consensus 76 ~l~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (267)
T 3sty_A 76 SLP-ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTT 154 (267)
T ss_dssp TSC-TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCE
T ss_pred hcC-CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccch
Confidence 421 467899999999999999999999999999998887553221100 000
Q ss_pred ---------hhhcCCCCCC-h---------------hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHH
Q 008274 479 ---------EKYMGLPSED-P---------------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA 533 (571)
Q Consensus 479 ---------~~~~g~~~~~-~---------------~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~ 533 (571)
..+....... . ..+............++|+|+++|++|..++++....+.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-- 232 (267)
T 3sty_A 155 LIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKN-- 232 (267)
T ss_dssp EECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHS--
T ss_pred hhhhHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhC--
Confidence 0000000000 0 001001111112222589999999999999988888777665
Q ss_pred cCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 534 ARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 534 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.+++++|++||.+ ..++.+.+.+.+.+|++++
T Consensus 233 --~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 233 --PPDEVKEIEGSDHVT-MMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp --CCSEEEECTTCCSCH-HHHSHHHHHHHHHHHHHHC
T ss_pred --CCceEEEeCCCCccc-cccChHHHHHHHHHHHHhc
Confidence 457999999999986 3467788999999999875
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-19 Score=179.19 Aligned_cols=203 Identities=14% Similarity=0.155 Sum_probs=137.2
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh----------
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL---------- 399 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~---------- 399 (571)
..+++....|... .+++|+||++||+++... .+..+++.|+++||.|+++|+||++.+..
T Consensus 82 ~~~p~~~~~P~~~---~~~~P~Vv~~HG~~~~~~-------~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~ 151 (383)
T 3d59_A 82 MTTPANWNSPLRP---GEKYPLVVFSHGLGAFRT-------LYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAE 151 (383)
T ss_dssp CEESSEETCCBCC---SSCEEEEEEECCTTCCTT-------TTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHH
T ss_pred eeeccccCCCccc---CCCCCEEEEcCCCCCCch-------HHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccc
Confidence 4455555555331 257899999999876543 34557899999999999999999876431
Q ss_pred --------------hhHHHHhccCCCCCchhHHHHHHHHHH--------------------cCCCcCCcEEEEeechHHH
Q 008274 400 --------------KFEASIKHNCGRIDAEDQLTGAEWLIK--------------------QGLAKVGHIGLYGWSYGGY 445 (571)
Q Consensus 400 --------------~~~~~~~~~~~~~~~~D~~~~~~~l~~--------------------~~~~d~~~i~l~G~S~GG~ 445 (571)
..........-....+|+..+++++.+ ...+|.+||+++|||+||.
T Consensus 152 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~ 231 (383)
T 3d59_A 152 IGDKSWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGA 231 (383)
T ss_dssp HTCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHH
T ss_pred cCCceeeeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHH
Confidence 000000000000014688888998875 3557888999999999999
Q ss_pred HHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHH
Q 008274 446 LSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTA 525 (571)
Q Consensus 446 ~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~ 525 (571)
+++.++.+.+ +|+++|+.+|... +.. . ..+.++++|+|++||++|..+ ...
T Consensus 232 ~a~~~a~~~~-~v~a~v~~~~~~~---------------p~~-~---------~~~~~i~~P~Lii~g~~D~~~--~~~- 282 (383)
T 3d59_A 232 TVIQTLSEDQ-RFRCGIALDAWMF---------------PLG-D---------EVYSRIPQPLFFINSEYFQYP--ANI- 282 (383)
T ss_dssp HHHHHHHHCT-TCCEEEEESCCCT---------------TCC-G---------GGGGSCCSCEEEEEETTTCCH--HHH-
T ss_pred HHHHHHhhCC-CccEEEEeCCccC---------------CCc-h---------hhhccCCCCEEEEecccccch--hhH-
Confidence 9999988755 5899999887421 000 0 123677899999999999854 222
Q ss_pred HHHHHHHHcCCCeeEEEcCCCCCCCCC------------------CCcH----HHHHHHHHHHHHHhC
Q 008274 526 RLINALVAARKPYEILIFPDERHMPRR------------------HRDR----IYMEERIWEFIERTL 571 (571)
Q Consensus 526 ~~~~~l~~~~~~~~~~~~~~~~H~~~~------------------~~~~----~~~~~~i~~fl~~~l 571 (571)
+..+++.+.+.+.+++++++++|.+.. ..+. +.+.+.+++||+++|
T Consensus 283 ~~~~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L 350 (383)
T 3d59_A 283 IKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHL 350 (383)
T ss_dssp HHHHTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHc
Confidence 333556666789999999999998521 1112 334457999999874
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-19 Score=181.29 Aligned_cols=220 Identities=12% Similarity=0.059 Sum_probs=137.0
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceee-----------cccccccchhhhHHHHhCCcEE
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLV-----------CDSWINTVDMRAQYLRSKGILV 386 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~-----------~~~~~~~~~~~~~~l~~~G~~v 386 (571)
..+.+.+++.+|..++++++.|.+. .++.|+||++||+++.... ...|......+++.|+++||+|
T Consensus 91 ~~e~v~~~~~~g~~l~~~l~~P~~~---~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~V 167 (398)
T 3nuz_A 91 RLEKWEFYPLPKCVSTFLVLIPDNI---NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIA 167 (398)
T ss_dssp EEEEEEECCSTTBCEEEEEEEESSC---CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEE
T ss_pred EEEEEEEEcCCCcEEEEEEEeCCCC---CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEE
Confidence 4577888889999999999999863 2678999999997664320 0111111114689999999999
Q ss_pred EEECCCCCCCChhhhHH------------H----HhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHH
Q 008274 387 WKLDNRGTARRGLKFEA------------S----IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAIT 450 (571)
Q Consensus 387 ~~~d~rG~~~~~~~~~~------------~----~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 450 (571)
+++|+||+|.++..... . ....++.....|+.++++++.+++.+|.+||+|+||||||++++.+
T Consensus 168 l~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~ 247 (398)
T 3nuz_A 168 VAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVL 247 (398)
T ss_dssp EEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHH
Confidence 99999999877533210 0 0001111124789999999999988999999999999999999988
Q ss_pred HhcCCCeeEEEEEcCccCCcccccchhhh-hhcC-CCC------CChhhhccCCcchhhccC-CCcEEEEecCCCCCCCh
Q 008274 451 LARFPDVFQCAVSGAPVTSWDGYDTFYTE-KYMG-LPS------EDPVGYEYSSVMHHVHKM-KGKLLLVHGMIDENVHF 521 (571)
Q Consensus 451 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~g-~~~------~~~~~~~~~s~~~~~~~~-~~p~lli~G~~D~~v~~ 521 (571)
++. +++++++|+.+++..+......... ...+ .+. ..+......+....+..+ ..|+||+||+.|..+
T Consensus 248 aa~-~~~i~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ap~PlLii~G~~D~~v-- 324 (398)
T 3nuz_A 248 GTL-DTSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHLIPDFWKNFNFPDIVAALAPRPIILTEGGLDRDL-- 324 (398)
T ss_dssp HHH-CTTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGCCTTHHHHCCHHHHHHHTTTSCEEECSCBCHHHH--
T ss_pred Hhc-CCcEEEEEEecccccchhhhhhhccccccccccCCccHHHhcchHhhhCCHHHHHHhhCCCcEEEeeCCchHHH--
Confidence 886 4567888887666553221111100 0000 000 000111112222223333 359999999999544
Q ss_pred HHHHHHHHHHHHcCCCeeEEEcC
Q 008274 522 RHTARLINALVAARKPYEILIFP 544 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~ 544 (571)
....++++++. ...++++.+||
T Consensus 325 ~~~~~~y~~~g-~~~~~~~~~~p 346 (398)
T 3nuz_A 325 DLVRKAYAIVG-TPDNVKIYHYK 346 (398)
T ss_dssp HHHHHHHHHHT-CTTSEEECCCG
T ss_pred HHHHHHHHHcC-CCcceEEEEeC
Confidence 34444444431 12466666666
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-19 Score=170.51 Aligned_cols=205 Identities=11% Similarity=0.049 Sum_probs=138.7
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|+||++||.+++.. . |..+++.|++ ||.|+++|+||+|.+..... ........+++.+.+..+++.
T Consensus 19 ~~p~vv~~HG~~~~~~---~----~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~----~~~~~~~~~~~~~~~~~~~~~ 86 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQS---A----WNRILPFFLR-DYRVVLYDLVCAGSVNPDFF----DFRRYTTLDPYVDDLLHILDA 86 (269)
T ss_dssp CSSEEEEECCTTCCGG---G----GTTTGGGGTT-TCEEEEECCTTSTTSCGGGC----CTTTCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCcHH---H----HHHHHHHHhC-CcEEEEEcCCCCCCCCCCCC----CccccCcHHHHHHHHHHHHHh
Confidence 3489999999876543 2 3445677777 99999999999988753110 011122456666666666554
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc------------c----------h----hhhhh
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD------------T----------F----YTEKY 481 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~------------~----------~----~~~~~ 481 (571)
- +.+++.|+|||+||.+++.++.++|++++++++.+|........ . . +....
T Consensus 87 ~--~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (269)
T 4dnp_A 87 L--GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLA 164 (269)
T ss_dssp T--TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred c--CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhh
Confidence 2 44689999999999999999999999999999988865321100 0 0 00000
Q ss_pred cCCCCC-------------Ch-------hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEE
Q 008274 482 MGLPSE-------------DP-------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 541 (571)
Q Consensus 482 ~g~~~~-------------~~-------~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 541 (571)
.+.... .. ..+...+....+.++++|+|+++|++|..++++.+..+.+.+ ...++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~ 241 (269)
T 4dnp_A 165 VGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHL---GGKNTVH 241 (269)
T ss_dssp HCSSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHS---SSCEEEE
T ss_pred ccCCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhC---CCCceEE
Confidence 010000 00 001122344567788999999999999999999988887765 2338999
Q ss_pred EcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 542 IFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 542 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+++++||.+ ..++.+.+.+.+.+||+++
T Consensus 242 ~~~~~gH~~-~~~~p~~~~~~i~~fl~~~ 269 (269)
T 4dnp_A 242 WLNIEGHLP-HLSAPTLLAQELRRALSHR 269 (269)
T ss_dssp EEEEESSCH-HHHCHHHHHHHHHHHHC--
T ss_pred EeCCCCCCc-cccCHHHHHHHHHHHHhhC
Confidence 999999987 3456788899999999763
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-19 Score=174.42 Aligned_cols=200 Identities=14% Similarity=0.161 Sum_probs=136.7
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|+||++||.+++.. .|.. .....++++||.|+++|+||+|.+... .....++..+.+..+++.-
T Consensus 43 ~~~vv~lHG~~~~~~---~~~~---~~~~~l~~~g~~vi~~D~~G~G~s~~~---------~~~~~~~~~~~~~~~l~~l 107 (293)
T 3hss_A 43 GDPVVFIAGRGGAGR---TWHP---HQVPAFLAAGYRCITFDNRGIGATENA---------EGFTTQTMVADTAALIETL 107 (293)
T ss_dssp SEEEEEECCTTCCGG---GGTT---TTHHHHHHTTEEEEEECCTTSGGGTTC---------CSCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchh---hcch---hhhhhHhhcCCeEEEEccCCCCCCCCc---------ccCCHHHHHHHHHHHHHhc
Confidence 478999999877643 3321 346788899999999999999755321 1123444444444444331
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhh------------------------------
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYT------------------------------ 478 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------------------------------ 478 (571)
+.+++.|+|||+||.+++.++.++|++++++++.+|............
T Consensus 108 --~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (293)
T 3hss_A 108 --DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRK 185 (293)
T ss_dssp --TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHH
T ss_pred --CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhcccc
Confidence 446899999999999999999999999999999988764321100000
Q ss_pred ------------hhhcCCCCCCh-------hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCee
Q 008274 479 ------------EKYMGLPSEDP-------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539 (571)
Q Consensus 479 ------------~~~~g~~~~~~-------~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 539 (571)
......+.... ......+....+.++++|+|+++|++|..++++.+..+.+.+ .+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~----~~~~ 261 (293)
T 3hss_A 186 TLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADAL----PNGR 261 (293)
T ss_dssp HHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHS----TTEE
T ss_pred cccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHC----CCce
Confidence 00000000000 001122334556788999999999999999999888887765 5679
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+++++++||.+ ..++...+.+.+.+||++.
T Consensus 262 ~~~~~~~gH~~-~~~~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 262 YLQIPDAGHLG-FFERPEAVNTAMLKFFASV 291 (293)
T ss_dssp EEEETTCCTTH-HHHSHHHHHHHHHHHHHTC
T ss_pred EEEeCCCcchH-hhhCHHHHHHHHHHHHHhc
Confidence 99999999986 3456788899999999863
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-18 Score=155.08 Aligned_cols=182 Identities=10% Similarity=0.032 Sum_probs=123.5
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhC-CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK-GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
+.|+||++||++++......|. ...+..|+++ ||.|+++|+||... .++...++.+.+
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~---~~~~~~l~~~~g~~vi~~d~~g~~~------------------~~~~~~~~~~~~ 61 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWY---GWVKKELEKIPGFQCLAKNMPDPIT------------------ARESIWLPFMET 61 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTH---HHHHHHHTTSTTCCEEECCCSSTTT------------------CCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCcccchHH---HHHHHHHhhccCceEEEeeCCCCCc------------------ccHHHHHHHHHH
Confidence 5689999999876521011221 2246778887 99999999998531 123444555555
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKG 506 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~ 506 (571)
.-.+ .+++.|+|||+||.+++.++.++| ++++|+.+|..............++. .......+.++.+
T Consensus 62 ~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 128 (194)
T 2qs9_A 62 ELHC-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDENERASGYFT----------RPWQWEKIKANCP 128 (194)
T ss_dssp TSCC-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHHHHHTSTTS----------SCCCHHHHHHHCS
T ss_pred HhCc-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhhhHHHhhhc----------ccccHHHHHhhCC
Confidence 4222 378999999999999999999998 89999988865421111100111111 1112334555678
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 507 KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 507 p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
|+|+++|++|..+|++.+..+.+.+ +.++.+++++||.+. .+... ...++++||++.
T Consensus 129 p~lii~G~~D~~vp~~~~~~~~~~~-----~~~~~~~~~~gH~~~-~~~p~-~~~~~~~fl~~~ 185 (194)
T 2qs9_A 129 YIVQFGSTDDPFLPWKEQQEVADRL-----ETKLHKFTDCGHFQN-TEFHE-LITVVKSLLKVP 185 (194)
T ss_dssp EEEEEEETTCSSSCHHHHHHHHHHH-----TCEEEEESSCTTSCS-SCCHH-HHHHHHHHHTCC
T ss_pred CEEEEEeCCCCcCCHHHHHHHHHhc-----CCeEEEeCCCCCccc-hhCHH-HHHHHHHHHHhh
Confidence 9999999999999999999988877 358899999999974 34444 456667999764
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.8e-20 Score=167.31 Aligned_cols=183 Identities=15% Similarity=0.073 Sum_probs=114.7
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhC--CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
|+||++||..++.. ++ ....+.+++.++ ||.|++||+||++.. ..+.+..+..+
T Consensus 3 ptIl~lHGf~ss~~---s~--k~~~l~~~~~~~~~~~~v~~pdl~~~g~~-------------------~~~~l~~~~~~ 58 (202)
T 4fle_A 3 STLLYIHGFNSSPS---SA--KATTFKSWLQQHHPHIEMQIPQLPPYPAE-------------------AAEMLESIVMD 58 (202)
T ss_dssp CEEEEECCTTCCTT---CH--HHHHHHHHHHHHCTTSEEECCCCCSSHHH-------------------HHHHHHHHHHH
T ss_pred cEEEEeCCCCCCCC---cc--HHHHHHHHHHHcCCCcEEEEeCCCCCHHH-------------------HHHHHHHHHHh
Confidence 89999999544321 11 122345666664 599999999987521 12223333332
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch-hhhhhcCCCCC-Chh-hhccCCcchhhccC
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF-YTEKYMGLPSE-DPV-GYEYSSVMHHVHKM 504 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~g~~~~-~~~-~~~~~s~~~~~~~~ 504 (571)
. +.++++|+|+||||++|+.++.++|....+++...+.......... ......+.+.. ... .....+....+.++
T Consensus 59 ~--~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (202)
T 4fle_A 59 K--AGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQIEKLES 136 (202)
T ss_dssp H--TTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEECTTTCCEEEECHHHHHHHHTTCCSSCSC
T ss_pred c--CCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhccccccccccchHHHHHHHHhhhhhhhcc
Confidence 1 4578999999999999999999999887766655443221100000 00000000000 000 00111223345667
Q ss_pred CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 505 ~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
++|+|++||++|.+||++++.++++ ++++.++++++|.+.. .+++.+.|.+||+
T Consensus 137 ~~P~LiihG~~D~~Vp~~~s~~l~~-------~~~l~i~~g~~H~~~~---~~~~~~~I~~FL~ 190 (202)
T 4fle_A 137 PDLLWLLQQTGDEVLDYRQAVAYYT-------PCRQTVESGGNHAFVG---FDHYFSPIVTFLG 190 (202)
T ss_dssp GGGEEEEEETTCSSSCHHHHHHHTT-------TSEEEEESSCCTTCTT---GGGGHHHHHHHHT
T ss_pred CceEEEEEeCCCCCCCHHHHHHHhh-------CCEEEEECCCCcCCCC---HHHHHHHHHHHHh
Confidence 8899999999999999999887753 5689999999998743 3456788999986
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-19 Score=173.04 Aligned_cols=202 Identities=14% Similarity=0.151 Sum_probs=138.0
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|+||++||.+++.. .|...+..|++ ||.|+++|+||+|.+........ .....++..+.+..+++.-
T Consensus 29 ~~vv~lHG~~~~~~-------~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~~~----~~~~~~~~~~~~~~~~~~~- 95 (282)
T 3qvm_A 29 KTVLLAHGFGCDQN-------MWRFMLPELEK-QFTVIVFDYVGSGQSDLESFSTK----RYSSLEGYAKDVEEILVAL- 95 (282)
T ss_dssp CEEEEECCTTCCGG-------GGTTTHHHHHT-TSEEEECCCTTSTTSCGGGCCTT----GGGSHHHHHHHHHHHHHHT-
T ss_pred CeEEEECCCCCCcc-------hHHHHHHHHhc-CceEEEEecCCCCCCCCCCCCcc----ccccHHHHHHHHHHHHHHc-
Confidence 88999999776643 23445778877 99999999999988764321000 0012445555555554442
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc---------------------------chhhhhhc
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD---------------------------TFYTEKYM 482 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---------------------------~~~~~~~~ 482 (571)
+.++++|+|||+||.+++.++.++|++++++++.+|........ ........
T Consensus 96 -~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (282)
T 3qvm_A 96 -DLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVM 174 (282)
T ss_dssp -TCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred -CCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhcc
Confidence 44789999999999999999999999999999998865321110 00000011
Q ss_pred CCCCC--------------Ch-------hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEE
Q 008274 483 GLPSE--------------DP-------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 541 (571)
Q Consensus 483 g~~~~--------------~~-------~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 541 (571)
+.... .. ......+....+.++++|+|+++|++|..++++.+..+.+.+ .+.+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~ 250 (282)
T 3qvm_A 175 GASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENI----PNSQLE 250 (282)
T ss_dssp CTTSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHS----SSEEEE
T ss_pred CCccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhC----CCCcEE
Confidence 11100 00 001112333556788999999999999999999888887765 467999
Q ss_pred EcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 542 IFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 542 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+++++||.+. .+....+.+.+.+||+++
T Consensus 251 ~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 278 (282)
T 3qvm_A 251 LIQAEGHCLH-MTDAGLITPLLIHFIQNN 278 (282)
T ss_dssp EEEEESSCHH-HHCHHHHHHHHHHHHHHC
T ss_pred EecCCCCccc-ccCHHHHHHHHHHHHHhc
Confidence 9999999873 355788999999999875
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=165.31 Aligned_cols=201 Identities=12% Similarity=0.095 Sum_probs=136.9
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|+||++||.+++.. .|......|++ +|.|+++|+||+|.+.... .....++++.+.+..+.+.
T Consensus 14 ~~~~vvllHG~~~~~~-------~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~-------~~~~~~~~~a~dl~~~l~~ 78 (268)
T 3v48_A 14 DAPVVVLISGLGGSGS-------YWLPQLAVLEQ-EYQVVCYDQRGTGNNPDTL-------AEDYSIAQMAAELHQALVA 78 (268)
T ss_dssp TCCEEEEECCTTCCGG-------GGHHHHHHHHT-TSEEEECCCTTBTTBCCCC-------CTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCccHH-------HHHHHHHHHhh-cCeEEEECCCCCCCCCCCc-------cccCCHHHHHHHHHHHHHH
Confidence 3478899999776543 34455666754 7999999999998775321 0122355566555555554
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc----------------hhhh---------hhc
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT----------------FYTE---------KYM 482 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~----------------~~~~---------~~~ 482 (571)
- ..+++.|+||||||.+++.++.++|++++++|+.++......... .+.. .++
T Consensus 79 l--~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (268)
T 3v48_A 79 A--GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWM 156 (268)
T ss_dssp T--TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred c--CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhh
Confidence 3 346899999999999999999999999999999876543210000 0000 000
Q ss_pred CC--------------CCCChh-------hhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEE
Q 008274 483 GL--------------PSEDPV-------GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 541 (571)
Q Consensus 483 g~--------------~~~~~~-------~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 541 (571)
.. ...... .+...+....+.++++|+|+++|++|..+|+..+..+.+.+ .+.+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~----p~~~~~ 232 (268)
T 3v48_A 157 AARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAAL----PDSQKM 232 (268)
T ss_dssp HTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHC----SSEEEE
T ss_pred hcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhC----CcCeEE
Confidence 00 000000 01112223456788999999999999999999888887765 567999
Q ss_pred EcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 542 IFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 542 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+++++||.+ ..++...+.+.+.+||.+.
T Consensus 233 ~~~~~GH~~-~~e~p~~~~~~i~~fl~~~ 260 (268)
T 3v48_A 233 VMPYGGHAC-NVTDPETFNALLLNGLASL 260 (268)
T ss_dssp EESSCCTTH-HHHCHHHHHHHHHHHHHHH
T ss_pred EeCCCCcch-hhcCHHHHHHHHHHHHHHh
Confidence 999999986 4577888999999999864
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.9e-18 Score=163.47 Aligned_cols=224 Identities=17% Similarity=0.152 Sum_probs=138.7
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
...+...+...+|..+++..+.+.+ +.|.||++||.+++.. .|..++..|++ ||.|+++|+||+|.
T Consensus 3 ~~~~~~~~~~~~g~~l~~~~~g~~~------~~~~vvllHG~~~~~~-------~~~~~~~~L~~-~~~vi~~Dl~G~G~ 68 (285)
T 3bwx_A 3 AEYEDRYWTSSDGLRLHFRAYEGDI------SRPPVLCLPGLTRNAR-------DFEDLATRLAG-DWRVLCPEMRGRGD 68 (285)
T ss_dssp CSSEEEEEECTTSCEEEEEEECBCT------TSCCEEEECCTTCCGG-------GGHHHHHHHBB-TBCEEEECCTTBTT
T ss_pred CccccCeeecCCCceEEEEEcCCCC------CCCcEEEECCCCcchh-------hHHHHHHHhhc-CCEEEeecCCCCCC
Confidence 3356677888899999888776532 1366888999876533 34556777776 99999999999988
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCc--cCCccc--
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAP--VTSWDG-- 472 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~--~~~~~~-- 472 (571)
+........+. . ....+|+.+.++.+ ..+++.|+||||||.+++.++.++|++++++|+.++ ......
T Consensus 69 S~~~~~~~~~~-~-~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 140 (285)
T 3bwx_A 69 SDYAKDPMTYQ-P-MQYLQDLEALLAQE------GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLE 140 (285)
T ss_dssp SCCCSSGGGCS-H-HHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHH
T ss_pred CCCCCCccccC-H-HHHHHHHHHHHHhc------CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhH
Confidence 75321000000 0 00134455555444 346899999999999999999999999999888542 211000
Q ss_pred -----------ccch-----hhhhhcC--CCCCC-------------------------hh---hhcc-------CCcch
Q 008274 473 -----------YDTF-----YTEKYMG--LPSED-------------------------PV---GYEY-------SSVMH 499 (571)
Q Consensus 473 -----------~~~~-----~~~~~~g--~~~~~-------------------------~~---~~~~-------~s~~~ 499 (571)
...+ ......+ .+... .. .+.. .....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
T 3bwx_A 141 RIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWP 220 (285)
T ss_dssp HHHHHTTCCCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHH
T ss_pred HHHHHhcCCcccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhH
Confidence 0000 0000000 00000 00 0000 00011
Q ss_pred hhccC-CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 500 HVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 500 ~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.+.++ ++|+|+++|++|..+++.....+. +. .+.++++++++||.+.. +....+ +.+.+||++
T Consensus 221 ~~~~~~~~P~lii~G~~D~~~~~~~~~~~~----~~-~~~~~~~i~~~gH~~~~-e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 221 LFDALATRPLLVLRGETSDILSAQTAAKMA----SR-PGVELVTLPRIGHAPTL-DEPESI-AAIGRLLER 284 (285)
T ss_dssp HHHHHTTSCEEEEEETTCSSSCHHHHHHHH----TS-TTEEEEEETTCCSCCCS-CSHHHH-HHHHHHHTT
T ss_pred HHHHccCCCeEEEEeCCCCccCHHHHHHHH----hC-CCcEEEEeCCCCccchh-hCchHH-HHHHHHHHh
Confidence 23345 789999999999999987665554 44 67899999999998743 444444 689999865
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=168.88 Aligned_cols=214 Identities=14% Similarity=0.065 Sum_probs=135.7
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccC
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNC 409 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~ 409 (571)
..+++....|.+ +.|.||++||.+.+.. .|...+..|++.||.|+++|+||+|.|......
T Consensus 34 ~~l~y~~~G~~~------~g~~vvllHG~~~~~~-------~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~------ 94 (310)
T 1b6g_A 34 LRAHYLDEGNSD------AEDVFLCLHGEPTWSY-------LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDE------ 94 (310)
T ss_dssp CEEEEEEEECTT------CSCEEEECCCTTCCGG-------GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCG------
T ss_pred eEEEEEEeCCCC------CCCEEEEECCCCCchh-------hHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCc------
Confidence 788887765422 1367888999876543 345567889999999999999999987532100
Q ss_pred CCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC--cc----------ccc---
Q 008274 410 GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS--WD----------GYD--- 474 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~--~~----------~~~--- 474 (571)
....++++.+.+..+++.- +.+++.|+||||||.+++.++.++|++++++|+.++... -. ...
T Consensus 95 ~~y~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (310)
T 1b6g_A 95 EDYTFEFHRNFLLALIERL--DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGF 172 (310)
T ss_dssp GGCCHHHHHHHHHHHHHHH--TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTH
T ss_pred CCcCHHHHHHHHHHHHHHc--CCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHH
Confidence 0112333333333333321 346899999999999999999999999999998776431 00 000
Q ss_pred chhhhhhc-------------CCCCCCh---hhhcc-------------------C----------Ccchhhc-cCCCcE
Q 008274 475 TFYTEKYM-------------GLPSEDP---VGYEY-------------------S----------SVMHHVH-KMKGKL 508 (571)
Q Consensus 475 ~~~~~~~~-------------g~~~~~~---~~~~~-------------------~----------s~~~~~~-~~~~p~ 508 (571)
..+..... +...... +.|.. . .....+. ++++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~ 252 (310)
T 1b6g_A 173 TAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQT 252 (310)
T ss_dssp HHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEE
T ss_pred HHHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCce
Confidence 00000000 0000000 00000 0 0012345 899999
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 509 LLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 509 lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
|+++|++|..++ ..+..+.+.+. +.....++++++||.+. . +.+.+.+.+.+||.+
T Consensus 253 Lvi~G~~D~~~~-~~~~~~~~~ip--~~~~~~i~~~~~GH~~~-~-~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 253 FMAIGMKDKLLG-PDVMYPMKALI--NGCPEPLEIADAGHFVQ-E-FGEQVAREALKHFAE 308 (310)
T ss_dssp EEEEETTCSSSS-HHHHHHHHHHS--TTCCCCEEETTCCSCGG-G-GHHHHHHHHHHHHHH
T ss_pred EEEeccCcchhh-hHHHHHHHhcc--cccceeeecCCcccchh-h-ChHHHHHHHHHHHhc
Confidence 999999999999 87888777663 22333333499999874 4 889999999999976
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.5e-19 Score=172.30 Aligned_cols=212 Identities=11% Similarity=0.052 Sum_probs=142.5
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|..+.+....+ .|+||++||.+++.. . |..++..|.++||.|+++|+||+|.+....
T Consensus 17 ~g~~l~~~~~g~---------~~~vv~~HG~~~~~~---~----~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~------ 74 (309)
T 3u1t_A 17 EGATIAYVDEGS---------GQPVLFLHGNPTSSY---L----WRNIIPYVVAAGYRAVAPDLIGMGDSAKPD------ 74 (309)
T ss_dssp TTEEEEEEEEEC---------SSEEEEECCTTCCGG---G----GTTTHHHHHHTTCEEEEECCTTSTTSCCCS------
T ss_pred CCeEEEEEEcCC---------CCEEEEECCCcchhh---h----HHHHHHHHHhCCCEEEEEccCCCCCCCCCC------
Confidence 677787665532 368899999877643 2 344577778889999999999998775321
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc-------cccch----
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD-------GYDTF---- 476 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~-------~~~~~---- 476 (571)
.....+++.+.+..+++.- ..+++.|+|||+||.+++.++.++|++++++|+.+|..... .....
T Consensus 75 --~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 150 (309)
T 3u1t_A 75 --IEYRLQDHVAYMDGFIDAL--GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPL 150 (309)
T ss_dssp --SCCCHHHHHHHHHHHHHHH--TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHH
T ss_pred --cccCHHHHHHHHHHHHHHc--CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHH
Confidence 1233555555555555432 34689999999999999999999999999999987654321 00000
Q ss_pred -------------------hhhhhc--C-C-CCCCh---hhhccC-------------------------------Ccch
Q 008274 477 -------------------YTEKYM--G-L-PSEDP---VGYEYS-------------------------------SVMH 499 (571)
Q Consensus 477 -------------------~~~~~~--g-~-~~~~~---~~~~~~-------------------------------s~~~ 499 (571)
+...++ . . ..... ..+... +...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (309)
T 3u1t_A 151 FRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGE 230 (309)
T ss_dssp HHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHH
T ss_pred HHHHhccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhh
Confidence 000000 0 0 00000 000000 1112
Q ss_pred hhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 500 HVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 500 ~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.++++|+|+++|++|..++++....+.+.+ .+.++.+++++||.+ ..++...+.+.|.+||+++
T Consensus 231 ~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~-~~~~p~~~~~~i~~fl~~~ 296 (309)
T 3u1t_A 231 WLMASPIPKLLFHAEPGALAPKPVVDYLSENV----PNLEVRFVGAGTHFL-QEDHPHLIGQGIADWLRRN 296 (309)
T ss_dssp HHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS----TTEEEEEEEEESSCH-HHHCHHHHHHHHHHHHHHH
T ss_pred hcccCCCCEEEEecCCCCCCCHHHHHHHHhhC----CCCEEEEecCCcccc-hhhCHHHHHHHHHHHHHhc
Confidence 35678899999999999999998887877765 456777889999976 3457788999999999875
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3e-19 Score=170.79 Aligned_cols=224 Identities=14% Similarity=0.158 Sum_probs=141.0
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.+...++..+| .+.+.... .+.|+||++||.+++.. .|...+..+.++||.|+++|+||+|.+.
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~--------~~~~~vv~lHG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 66 (279)
T 4g9e_A 3 INYHELETSHG-RIAVRESE--------GEGAPLLMIHGNSSSGA-------IFAPQLEGEIGKKWRVIAPDLPGHGKST 66 (279)
T ss_dssp CEEEEEEETTE-EEEEEECC--------CCEEEEEEECCTTCCGG-------GGHHHHHSHHHHHEEEEEECCTTSTTSC
T ss_pred eEEEEEEcCCc-eEEEEecC--------CCCCeEEEECCCCCchh-------HHHHHHhHHHhcCCeEEeecCCCCCCCC
Confidence 35667777665 45544332 23478999999877643 2445566667789999999999998876
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc---
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT--- 475 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~--- 475 (571)
....... ....+++.+.+..+++.- +.+++.++|||+||.+++.++.++|+..+.++..++.........
T Consensus 67 ~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~~~~vl~~~~~~~~~~~~~~~~ 139 (279)
T 4g9e_A 67 DAIDPDR-----SYSMEGYADAMTEVMQQL--GIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREEVGQGFK 139 (279)
T ss_dssp CCSCHHH-----HSSHHHHHHHHHHHHHHH--TCCCCEEEEETHHHHHHHHHTTTCTTCCEEEEESCCCCCGGGHHHHBC
T ss_pred CCCCccc-----CCCHHHHHHHHHHHHHHh--CCCceEEEEECchHHHHHHHHhhCCcceeEEEecCCCCCCCccchhhc
Confidence 4211111 112444554444444431 346899999999999999999999995444444444332211000
Q ss_pred -------------------hhhhhhcCCCCCCh--hhh------------------ccCCcchhhccCCCcEEEEecCCC
Q 008274 476 -------------------FYTEKYMGLPSEDP--VGY------------------EYSSVMHHVHKMKGKLLLVHGMID 516 (571)
Q Consensus 476 -------------------~~~~~~~g~~~~~~--~~~------------------~~~s~~~~~~~~~~p~lli~G~~D 516 (571)
.+.......+.... ..+ ...+....+.++++|+|+++|++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 219 (279)
T 4g9e_A 140 SGPDMALAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDE 219 (279)
T ss_dssp CSTTGGGGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTC
T ss_pred cchhhhhcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCC
Confidence 00000111111000 000 112223346778999999999999
Q ss_pred CCCChHHHHHHH-HHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 517 ENVHFRHTARLI-NALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 517 ~~v~~~~~~~~~-~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
..++++....+. +. ..+.++++++++||.+ ..++...+.+.+.+||++.
T Consensus 220 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~-~~~~p~~~~~~i~~fl~~~ 269 (279)
T 4g9e_A 220 PFVELDFVSKVKFGN----LWEGKTHVIDNAGHAP-FREAPAEFDAYLARFIRDC 269 (279)
T ss_dssp SSBCHHHHTTCCCSS----BGGGSCEEETTCCSCH-HHHSHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHhhcc----CCCCeEEEECCCCcch-HHhCHHHHHHHHHHHHHHh
Confidence 999998776665 32 2367889999999986 4467788999999999864
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.79 E-value=8.9e-19 Score=163.99 Aligned_cols=194 Identities=18% Similarity=0.175 Sum_probs=129.5
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH--
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI-- 425 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~-- 425 (571)
+.|+||++||.+++.. .|. ....|+ +||.|+++|+||+|.+... .....++..+.+..++
T Consensus 15 ~~~~vv~~hG~~~~~~---~~~-----~~~~l~-~g~~v~~~d~~g~g~s~~~---------~~~~~~~~~~~~~~~~~~ 76 (245)
T 3e0x_A 15 SPNTLLFVHGSGCNLK---IFG-----ELEKYL-EDYNCILLDLKGHGESKGQ---------CPSTVYGYIDNVANFITN 76 (245)
T ss_dssp CSCEEEEECCTTCCGG---GGT-----TGGGGC-TTSEEEEECCTTSTTCCSC---------CCSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcccHH---HHH-----HHHHHH-hCCEEEEecCCCCCCCCCC---------CCcCHHHHHHHHHHHHHh
Confidence 4589999999877643 332 234444 8999999999999876521 1223455555555555
Q ss_pred --HcCCCcCCcEEEEeechHHHHHHHHHhc-CCCeeEEEEEcCccCCcccccchhhh-----------------------
Q 008274 426 --KQGLAKVGHIGLYGWSYGGYLSAITLAR-FPDVFQCAVSGAPVTSWDGYDTFYTE----------------------- 479 (571)
Q Consensus 426 --~~~~~d~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~----------------------- 479 (571)
...... +++++|||+||.+++.++.+ +|+ ++++++.+|.............
T Consensus 77 ~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (245)
T 3e0x_A 77 SEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPL 153 (245)
T ss_dssp CTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHH
T ss_pred hhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHH
Confidence 112223 99999999999999999999 999 9999999987665211111100
Q ss_pred --hhcCCCCCChhh-------hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 480 --KYMGLPSEDPVG-------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 480 --~~~g~~~~~~~~-------~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
.+.......+.. ....+....+.++++|+|+++|++|..++++....+.+.+ .+.++++++++||.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~ 229 (245)
T 3e0x_A 154 SEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEV----ENSELKIFETGKHFL 229 (245)
T ss_dssp HHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS----SSEEEEEESSCGGGH
T ss_pred HHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHc----CCceEEEeCCCCcce
Confidence 000000001111 1223444567788999999999999999999888887765 468999999999986
Q ss_pred CCCCcHHHHHHHHHHHH
Q 008274 551 RRHRDRIYMEERIWEFI 567 (571)
Q Consensus 551 ~~~~~~~~~~~~i~~fl 567 (571)
. .++...+.+.+.+||
T Consensus 230 ~-~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 230 L-VVNAKGVAEEIKNFI 245 (245)
T ss_dssp H-HHTHHHHHHHHHTTC
T ss_pred E-EecHHHHHHHHHhhC
Confidence 3 345566666666663
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-17 Score=163.73 Aligned_cols=222 Identities=17% Similarity=0.148 Sum_probs=139.0
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
+...++..+|..+++....++. .|.||++||++++.. + ......+...||.|+++|+||+|.+..
T Consensus 15 ~~~~~~~~~g~~l~~~~~g~~~-------g~~vvllHG~~~~~~----~----~~~~~~~~~~~~~vi~~D~~G~G~S~~ 79 (317)
T 1wm1_A 15 DSGWLDTGDGHRIYWELSGNPN-------GKPAVFIHGGPGGGI----S----PHHRQLFDPERYKVLLFDQRGCGRSRP 79 (317)
T ss_dssp EEEEEECSSSCEEEEEEEECTT-------SEEEEEECCTTTCCC----C----GGGGGGSCTTTEEEEEECCTTSTTCBS
T ss_pred eeeEEEcCCCcEEEEEEcCCCC-------CCcEEEECCCCCccc----c----hhhhhhccccCCeEEEECCCCCCCCCC
Confidence 4456777788888776554321 245788999876432 1 011233446799999999999998753
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc--------
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD-------- 471 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~-------- 471 (571)
.. ........++.+.+..+.+.- +.+++.|+||||||.+++.++.++|++++++|+.++.....
T Consensus 80 ~~------~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 151 (317)
T 1wm1_A 80 HA------SLDNNTTWHLVADIERLREMA--GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQ 151 (317)
T ss_dssp TT------CCTTCSHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHT
T ss_pred Cc------ccccccHHHHHHHHHHHHHHc--CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhh
Confidence 11 011223455555555555542 44689999999999999999999999999999877543210
Q ss_pred -----cccch-------------------hhhhhcCC---------------------CCCChh----------------
Q 008274 472 -----GYDTF-------------------YTEKYMGL---------------------PSEDPV---------------- 490 (571)
Q Consensus 472 -----~~~~~-------------------~~~~~~g~---------------------~~~~~~---------------- 490 (571)
..... +....... ......
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (317)
T 1wm1_A 152 DGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARI 231 (317)
T ss_dssp SSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHH
T ss_pred ccchhhcHHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHh
Confidence 00000 00000000 000000
Q ss_pred --------hhcc-CC-cchhhccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHH
Q 008274 491 --------GYEY-SS-VMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYM 559 (571)
Q Consensus 491 --------~~~~-~s-~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~ 559 (571)
.+.. .. ....+.+++ +|+|+++|++|..+++..+..+.+.+ .+.++++++++||.+..++....+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~----p~~~~~~i~~~gH~~~~~~~~~~~ 307 (317)
T 1wm1_A 232 ENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW----PEAELHIVEGAGHSYDEPGILHQL 307 (317)
T ss_dssp HHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC----TTSEEEEETTCCSSTTSHHHHHHH
T ss_pred hhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhC----CCceEEEECCCCCCCCCcchHHHH
Confidence 0000 01 233455675 99999999999999999888877765 467999999999987433346667
Q ss_pred HHHHHHHHH
Q 008274 560 EERIWEFIE 568 (571)
Q Consensus 560 ~~~i~~fl~ 568 (571)
.+.+.+|+.
T Consensus 308 ~~~i~~f~~ 316 (317)
T 1wm1_A 308 MIATDRFAG 316 (317)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 777777764
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.2e-18 Score=164.97 Aligned_cols=212 Identities=12% Similarity=0.081 Sum_probs=134.8
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccC
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNC 409 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~ 409 (571)
..+++....|.+ ..|.||++||.+.+.. .|...+..|+++||.|+++|+||+|.+......
T Consensus 33 ~~l~y~~~G~~~------~g~~vvllHG~~~~~~-------~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~------ 93 (297)
T 2xt0_A 33 LRMHYVDEGPRD------AEHTFLCLHGEPSWSF-------LYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDD------ 93 (297)
T ss_dssp CCEEEEEESCTT------CSCEEEEECCTTCCGG-------GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCG------
T ss_pred eEEEEEEccCCC------CCCeEEEECCCCCcce-------eHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCc------
Confidence 778887765422 1367888999876532 345567889999999999999999987532100
Q ss_pred CCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-c---chhhh------
Q 008274 410 GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY-D---TFYTE------ 479 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~-~---~~~~~------ 479 (571)
....++++.+.+..+++.- +.+++.|+||||||.+++.++.++|++++++|+.++....... . ..+..
T Consensus 94 ~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (297)
T 2xt0_A 94 AVYTFGFHRRSLLAFLDAL--QLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSP 171 (297)
T ss_dssp GGCCHHHHHHHHHHHHHHH--TCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCT
T ss_pred ccCCHHHHHHHHHHHHHHh--CCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhccc
Confidence 0112333333333333321 3468999999999999999999999999999988764311000 0 00000
Q ss_pred ---------------------hhcCCCCCCh------hhhccC--------------Ccchhhc-cCCCcEEEEecCCCC
Q 008274 480 ---------------------KYMGLPSEDP------VGYEYS--------------SVMHHVH-KMKGKLLLVHGMIDE 517 (571)
Q Consensus 480 ---------------------~~~g~~~~~~------~~~~~~--------------s~~~~~~-~~~~p~lli~G~~D~ 517 (571)
.+.. +.... ..+... .....+. ++++|+|+++|++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~ 250 (297)
T 2xt0_A 172 DLDVGKLMQRAIPGITDAEVAAYDA-PFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDP 250 (297)
T ss_dssp TCCHHHHHHHHSTTCCHHHHHHHHT-TCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCS
T ss_pred ccchhHHHhccCccCCHHHHHHHhc-cccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCc
Confidence 0000 00000 001000 0112355 889999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 518 NVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 518 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.++ ..+..+.+.+. +.....+.++++||.+. . ..+.+.+.+.+||.
T Consensus 251 ~~~-~~~~~~~~~~p--~~~~~~~~~~~~GH~~~-~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 251 VLG-PEVMGMLRQAI--RGCPEPMIVEAGGHFVQ-E-HGEPIARAALAAFG 296 (297)
T ss_dssp SSS-HHHHHHHHHHS--TTCCCCEEETTCCSSGG-G-GCHHHHHHHHHHTT
T ss_pred ccC-hHHHHHHHhCC--CCeeEEeccCCCCcCcc-c-CHHHHHHHHHHHHh
Confidence 999 77777777653 23344445799999974 4 78889999999985
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=9e-19 Score=168.05 Aligned_cols=212 Identities=14% Similarity=0.109 Sum_probs=136.4
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.+|..+++..+. .. |.||++||.+.+.. .|...+..|+++||.|+++|+||+|.+....
T Consensus 10 ~~g~~l~y~~~g--------~~-~pvvllHG~~~~~~-------~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~----- 68 (279)
T 1hkh_A 10 STPIELYYEDQG--------SG-QPVVLIHGYPLDGH-------SWERQTRELLAQGYRVITYDRRGFGGSSKVN----- 68 (279)
T ss_dssp TEEEEEEEEEES--------SS-EEEEEECCTTCCGG-------GGHHHHHHHHHTTEEEEEECCTTSTTSCCCS-----
T ss_pred CCCeEEEEEecC--------CC-CcEEEEcCCCchhh-------HHhhhHHHHHhCCcEEEEeCCCCCCCCCCCC-----
Confidence 356666555432 12 34888999876533 3455678899999999999999999875321
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-eeEEEEEcCccCCcccc-----c----ch
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGAPVTSWDGY-----D----TF 476 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-~~~~~v~~~~~~~~~~~-----~----~~ 476 (571)
.....++..+.+..+.+.- +.+++.|+||||||.+++.++.++|+ +++++|+.++....... . ..
T Consensus 69 ---~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 143 (279)
T 1hkh_A 69 ---TGYDYDTFAADLHTVLETL--DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEV 143 (279)
T ss_dssp ---SCCSHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHH
T ss_pred ---CCCCHHHHHHHHHHHHHhc--CCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHH
Confidence 1122333333333333321 44689999999999999999999998 99999998764321100 0 00
Q ss_pred h------------------hhhhcCC----C-CCChhh---hc------------------cCCcchhhccC---CCcEE
Q 008274 477 Y------------------TEKYMGL----P-SEDPVG---YE------------------YSSVMHHVHKM---KGKLL 509 (571)
Q Consensus 477 ~------------------~~~~~g~----~-~~~~~~---~~------------------~~s~~~~~~~~---~~p~l 509 (571)
+ ...+++. . ....+. +. ..+....+.++ ++|+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~l 223 (279)
T 1hkh_A 144 FDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTL 223 (279)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEE
T ss_pred HHHHHHHhhhhhhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEE
Confidence 0 0001110 0 000000 00 11122345667 89999
Q ss_pred EEecCCCCCCChHHH-HHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 510 LVHGMIDENVHFRHT-ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 510 li~G~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+++|++|..+|++.+ ..+.+.+ .+.++++++++||.+ ..++.+.+.+.+.+||++
T Consensus 224 ii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 224 ILHGTKDNILPIDATARRFHQAV----PEADYVEVEGAPHGL-LWTHADEVNAALKTFLAK 279 (279)
T ss_dssp EEEETTCSSSCTTTTHHHHHHHC----TTSEEEEETTCCTTH-HHHTHHHHHHHHHHHHHC
T ss_pred EEEcCCCccCChHHHHHHHHHhC----CCeeEEEeCCCCccc-hhcCHHHHHHHHHHHhhC
Confidence 999999999998876 6665543 567999999999987 345678899999999863
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.5e-18 Score=158.25 Aligned_cols=211 Identities=14% Similarity=0.058 Sum_probs=133.8
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh--CCcEEEEECCCCCCCC
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS--KGILVWKLDNRGTARR 397 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~rG~~~~ 397 (571)
+.+.|++ ..+...++.|.. +..++||++||.+.+.. .| ..+++.+.. .++.++.|+-+-....
T Consensus 16 ~~~~~~~---~~l~y~ii~P~~-----~~~~~VI~LHG~G~~~~---dl----~~l~~~l~~~~~~~~~i~P~Ap~~~~~ 80 (246)
T 4f21_A 16 ENLYFQS---NAMNYELMEPAK-----QARFCVIWLHGLGADGH---DF----VDIVNYFDVSLDEIRFIFPHADIIPVT 80 (246)
T ss_dssp ----------CCCCEEEECCSS-----CCCEEEEEEEC--CCCC---CG----GGGGGGCCSCCTTEEEEEECGGGSCTT
T ss_pred ceEEEec---CCcCceEeCCCC-----cCCeEEEEEcCCCCCHH---HH----HHHHHHhhhcCCCeEEEeCCCCccccc
Confidence 4455554 246677888865 34578999999655432 22 223344432 4788999886432111
Q ss_pred ------hhhhHHH-------HhccCCCCCchhHHHHHHHHHH---cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEE
Q 008274 398 ------GLKFEAS-------IKHNCGRIDAEDQLTGAEWLIK---QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 461 (571)
Q Consensus 398 ------~~~~~~~-------~~~~~~~~~~~D~~~~~~~l~~---~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~ 461 (571)
+..|... .....-...+....+.++.+++ ...+|.+||++.|+|+||.+++.+++++|+.|+++
T Consensus 81 ~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~ 160 (246)
T 4f21_A 81 INMGMQMRAWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGI 160 (246)
T ss_dssp THHHHHHHSCTTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEE
T ss_pred cCCCCCcccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccc
Confidence 1111100 0000001112333444444433 24589999999999999999999999999999999
Q ss_pred EEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEE
Q 008274 462 VSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 541 (571)
Q Consensus 462 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 541 (571)
++.++..... +.+.. .. .....++|+|++||+.|++||++.++++++.|++.|.++++.
T Consensus 161 i~~sG~lp~~-------~~~~~----------~~----~~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~ 219 (246)
T 4f21_A 161 MALSTYLPAW-------DNFKG----------KI----TSINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYK 219 (246)
T ss_dssp EEESCCCTTH-------HHHST----------TC----CGGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEE
T ss_pred eehhhccCcc-------ccccc----------cc----cccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEE
Confidence 9988754210 00000 00 011235799999999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 542 IFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 542 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.||+.||.+. .+..+.+.+||++.|
T Consensus 220 ~y~g~gH~i~-----~~~l~~~~~fL~k~l 244 (246)
T 4f21_A 220 HYVGMQHSVC-----MEEIKDISNFIAKTF 244 (246)
T ss_dssp EESSCCSSCC-----HHHHHHHHHHHHHHT
T ss_pred EECCCCCccC-----HHHHHHHHHHHHHHh
Confidence 9999999883 234577999999875
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=184.07 Aligned_cols=225 Identities=11% Similarity=-0.002 Sum_probs=148.6
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
...+...+...||..+++.... +.|+||++||++++.. .|...++.|+++||.|+++|+||+|.
T Consensus 235 ~~~~~~~~~~~dg~~l~~~~~g---------~~p~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~v~~~D~~G~G~ 298 (555)
T 3i28_A 235 SDMSHGYVTVKPRVRLHFVELG---------SGPAVCLCHGFPESWY-------SWRYQIPALAQAGYRVLAMDMKGYGE 298 (555)
T ss_dssp GGSEEEEEEEETTEEEEEEEEC---------SSSEEEEECCTTCCGG-------GGTTHHHHHHHTTCEEEEECCTTSTT
T ss_pred cccceeEEEeCCCcEEEEEEcC---------CCCEEEEEeCCCCchh-------HHHHHHHHHHhCCCEEEEecCCCCCC
Confidence 3456677777789888876552 2378999999877643 34556889999999999999999987
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc-
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT- 475 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~- 475 (571)
+..... .......++.+.+..+++.- +.++++++|||+||.+++.++.++|++++++|+.++.........
T Consensus 299 S~~~~~------~~~~~~~~~~~d~~~~~~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 370 (555)
T 3i28_A 299 SSAPPE------IEEYCMEVLCKEMVTFLDKL--GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMS 370 (555)
T ss_dssp SCCCSC------GGGGSHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSC
T ss_pred CCCCCC------cccccHHHHHHHHHHHHHHc--CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccc
Confidence 753211 00111333333333333321 446899999999999999999999999999998876532110000
Q ss_pred --------------------------------hhhhhhcCCCCC----------------------------Ch---hhh
Q 008274 476 --------------------------------FYTEKYMGLPSE----------------------------DP---VGY 492 (571)
Q Consensus 476 --------------------------------~~~~~~~g~~~~----------------------------~~---~~~ 492 (571)
.+....+..... .. ..|
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (555)
T 3i28_A 371 PLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFY 450 (555)
T ss_dssp HHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHH
T ss_pred hHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHH
Confidence 000000000000 00 000
Q ss_pred ----cc------------------CCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 493 ----EY------------------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 493 ----~~------------------~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
.. .+....+.++++|+|+++|++|..++++.+..+.+.+ .++++++++++||.+
T Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~ 526 (555)
T 3i28_A 451 VQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI----PHLKRGHIEDCGHWT 526 (555)
T ss_dssp HHHHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC----TTCEEEEETTCCSCH
T ss_pred HHHHhcccchhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhC----CCceEEEeCCCCCCc
Confidence 00 0112234578899999999999999998887776654 467999999999986
Q ss_pred CCCCcHHHHHHHHHHHHHHh
Q 008274 551 RRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 551 ~~~~~~~~~~~~i~~fl~~~ 570 (571)
..++...+.+.+.+||++.
T Consensus 527 -~~e~p~~~~~~i~~fl~~~ 545 (555)
T 3i28_A 527 -QMDKPTEVNQILIKWLDSD 545 (555)
T ss_dssp -HHHSHHHHHHHHHHHHHHH
T ss_pred -chhCHHHHHHHHHHHHHhc
Confidence 3356788999999999875
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.9e-18 Score=170.42 Aligned_cols=236 Identities=13% Similarity=0.042 Sum_probs=146.8
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeec--ccccccchhhhH---HHHhCCcEEEEECCCC-CCCChhhh
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVC--DSWINTVDMRAQ---YLRSKGILVWKLDNRG-TARRGLKF 401 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~--~~~~~~~~~~~~---~l~~~G~~v~~~d~rG-~~~~~~~~ 401 (571)
+|..+.+..+.+.+. .+.|+||++||.+++.... ..-...|..++. .|++.||.|+++|+|| ++++....
T Consensus 42 ~g~~l~y~~~g~~~~----~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~ 117 (377)
T 2b61_A 42 SYINVAYQTYGTLND----EKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPS 117 (377)
T ss_dssp CSEEEEEEEESCCCT----TCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTT
T ss_pred cceeEEEEecccccc----cCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCc
Confidence 344566655544321 2348899999987765420 000000232332 3668899999999999 56554221
Q ss_pred HH-HH-----hccCCCCCchhHHHHHHHHHHcCCCcCCcEE-EEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc
Q 008274 402 EA-SI-----KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIG-LYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD 474 (571)
Q Consensus 402 ~~-~~-----~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~-l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~ 474 (571)
.. .. ...+....++|+.+.+..+++.- +.+++. |+||||||.+++.++.++|++++++|+.++........
T Consensus 118 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 195 (377)
T 2b61_A 118 SINPQTGKPYGSQFPNIVVQDIVKVQKALLEHL--GISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEA 195 (377)
T ss_dssp SBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHT--TCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHH
T ss_pred ccCccccccccccCCcccHHHHHHHHHHHHHHc--CCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccc
Confidence 00 00 01111245677777777776643 446887 99999999999999999999999999988864321000
Q ss_pred ch----------------------------------------------hhhhhcCCCC---------CChhhhc------
Q 008274 475 TF----------------------------------------------YTEKYMGLPS---------EDPVGYE------ 493 (571)
Q Consensus 475 ~~----------------------------------------------~~~~~~g~~~---------~~~~~~~------ 493 (571)
.. +...+..... ...+.|.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (377)
T 2b61_A 196 IGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKK 275 (377)
T ss_dssp HHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhh
Confidence 00 0000000000 0000000
Q ss_pred ------------------c-------CCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcC-CCC
Q 008274 494 ------------------Y-------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP-DER 547 (571)
Q Consensus 494 ------------------~-------~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~~~ 547 (571)
. .+....+.++++|+|+++|++|..+++++.....+.+.+...+.++++++ ++|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g 355 (377)
T 2b61_A 276 FLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYG 355 (377)
T ss_dssp HHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTG
T ss_pred hccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCCceEEEeCCCCC
Confidence 0 01134567788999999999999999966666666666666788999999 999
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHh
Q 008274 548 HMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 548 H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
|.+. .+....+.+.|.+||+++
T Consensus 356 H~~~-~e~p~~~~~~i~~fl~~~ 377 (377)
T 2b61_A 356 HDAF-LVDYDQFEKRIRDGLAGN 377 (377)
T ss_dssp GGHH-HHCHHHHHHHHHHHHHTC
T ss_pred chhh-hcCHHHHHHHHHHHHhcC
Confidence 9873 355778999999999763
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.2e-18 Score=163.97 Aligned_cols=217 Identities=13% Similarity=0.073 Sum_probs=137.6
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCC-CceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH
Q 008274 326 ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGP-CVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 326 ~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~-~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
..+|..+++....+. ..|+||++||.+ +... .. .|...+..|++. |.|+++|+||+|.+.....
T Consensus 13 ~~~g~~l~y~~~g~~-------g~p~vvllHG~~~~~~~-~~----~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~-- 77 (285)
T 1c4x_A 13 PSGTLASHALVAGDP-------QSPAVVLLHGAGPGAHA-AS----NWRPIIPDLAEN-FFVVAPDLIGFGQSEYPET-- 77 (285)
T ss_dssp CCTTSCEEEEEESCT-------TSCEEEEECCCSTTCCH-HH----HHGGGHHHHHTT-SEEEEECCTTSTTSCCCSS--
T ss_pred EECCEEEEEEecCCC-------CCCEEEEEeCCCCCCcc-hh----hHHHHHHHHhhC-cEEEEecCCCCCCCCCCCC--
Confidence 346777777655321 237789999964 2111 11 234456677665 9999999999987753210
Q ss_pred HhccCCCCCchhH----HHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-c-----
Q 008274 405 IKHNCGRIDAEDQ----LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY-D----- 474 (571)
Q Consensus 405 ~~~~~~~~~~~D~----~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~-~----- 474 (571)
....+++. .+.+..+.+.- +.+++.|+||||||.+++.++.++|++++++|+.+|....... .
T Consensus 78 -----~~~~~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 150 (285)
T 1c4x_A 78 -----YPGHIMSWVGMRVEQILGLMNHF--GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELAR 150 (285)
T ss_dssp -----CCSSHHHHHHHHHHHHHHHHHHH--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHH
T ss_pred -----cccchhhhhhhHHHHHHHHHHHh--CCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHH
Confidence 01223444 44443333321 3468999999999999999999999999999998775421000 0
Q ss_pred --ch--------h---hhhhcCCCCCC--h-h----hh---------c---------------cCCcchhhccCCCcEEE
Q 008274 475 --TF--------Y---TEKYMGLPSED--P-V----GY---------E---------------YSSVMHHVHKMKGKLLL 510 (571)
Q Consensus 475 --~~--------~---~~~~~g~~~~~--~-~----~~---------~---------------~~s~~~~~~~~~~p~ll 510 (571)
.. . .......+... . + .+ . .......+.++++|+|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 230 (285)
T 1c4x_A 151 LLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLV 230 (285)
T ss_dssp HHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEE
T ss_pred HHHHhccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEE
Confidence 00 0 00000111100 0 0 00 0 00122345678899999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 511 VHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 511 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++|++|..+|++.++.+.+.+ .+.++++++++||.+ ..++...+.+.+.+||.+
T Consensus 231 i~G~~D~~~p~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 231 FHGRQDRIVPLDTSLYLTKHL----KHAELVVLDRCGHWA-QLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp EEETTCSSSCTHHHHHHHHHC----SSEEEEEESSCCSCH-HHHSHHHHHHHHHHHHHC
T ss_pred EEeCCCeeeCHHHHHHHHHhC----CCceEEEeCCCCcch-hhcCHHHHHHHHHHHHhc
Confidence 999999999999888777654 468999999999986 335678889999999975
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.77 E-value=7.1e-19 Score=170.11 Aligned_cols=217 Identities=12% Similarity=0.046 Sum_probs=143.8
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh
Q 008274 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF 401 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~ 401 (571)
..+.. +|..+.+..+.++ ..|+||++||.+++.. . |...+..|+ +||.|+++|+||+|.+....
T Consensus 13 ~~~~~-~g~~l~~~~~g~~-------~~~~vl~lHG~~~~~~---~----~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~ 76 (299)
T 3g9x_A 13 HYVEV-LGERMHYVDVGPR-------DGTPVLFLHGNPTSSY---L----WRNIIPHVA-PSHRCIAPDLIGMGKSDKPD 76 (299)
T ss_dssp EEEEE-TTEEEEEEEESCS-------SSCCEEEECCTTCCGG---G----GTTTHHHHT-TTSCEEEECCTTSTTSCCCC
T ss_pred eeeee-CCeEEEEEecCCC-------CCCEEEEECCCCccHH---H----HHHHHHHHc-cCCEEEeeCCCCCCCCCCCC
Confidence 34444 7788888777543 2367899999877643 2 344566775 59999999999998775321
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc---cchh-
Q 008274 402 EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY---DTFY- 477 (571)
Q Consensus 402 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~~- 477 (571)
.....++..+.+..+++.- +.+++.|+|||+||.+++.++.++|++++++|+.++....... ....
T Consensus 77 --------~~~~~~~~~~~~~~~~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 146 (299)
T 3g9x_A 77 --------LDYFFDDHVRYLDAFIEAL--GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFAR 146 (299)
T ss_dssp --------CCCCHHHHHHHHHHHHHHT--TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGH
T ss_pred --------CcccHHHHHHHHHHHHHHh--CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHH
Confidence 1234566666666665542 4568999999999999999999999999999988755432211 0000
Q ss_pred ----------------------hhhhc---CCCCCCh---hhh-----------------ccC--------------Ccc
Q 008274 478 ----------------------TEKYM---GLPSEDP---VGY-----------------EYS--------------SVM 498 (571)
Q Consensus 478 ----------------------~~~~~---g~~~~~~---~~~-----------------~~~--------------s~~ 498 (571)
...+. ....... ..+ ... +..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (299)
T 3g9x_A 147 ETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYM 226 (299)
T ss_dssp HHHHHHTSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHH
T ss_pred HHHHHHcCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhh
Confidence 00000 0000000 000 000 111
Q ss_pred hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 499 HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 499 ~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
..+.++++|+|+++|++|..++++....+.+.+ .++++++++++||.+ ..++.+.+.+.|.+++.+
T Consensus 227 ~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~~~~~ 292 (299)
T 3g9x_A 227 NWLHQSPVPKLLFWGTPGVLIPPAEAARLAESL----PNCKTVDIGPGLHYL-QEDNPDLIGSEIARWLPA 292 (299)
T ss_dssp HHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS----TTEEEEEEEEESSCH-HHHCHHHHHHHHHHHSGG
T ss_pred hhcccCCCCeEEEecCCCCCCCHHHHHHHHhhC----CCCeEEEeCCCCCcc-hhcCHHHHHHHHHHHHhh
Confidence 224678899999999999999999888887765 568899999999987 346677788888877654
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.77 E-value=8.3e-17 Score=163.56 Aligned_cols=214 Identities=16% Similarity=0.141 Sum_probs=154.9
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
....+.|||||++|||.+.+... ..|+++|+++++.+.+..
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~---------------------------------~~i~~~d~~tg~~~~l~~------ 220 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGR---------------------------------SALVIQTLANGAVRQVAS------ 220 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSS---------------------------------CEEEEEETTTCCEEEEEC------
T ss_pred cceeeEEcCCCCEEEEEEecCCC---------------------------------cEEEEEECCCCcEEEeec------
Confidence 34568899999999998754221 268999999998876632
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWA 181 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~ 181 (571)
.......++|||||+.|++...++. ...|+++|+++++.++++..... .. .. .|++|+ +++.
T Consensus 221 ---~~~~~~~~~~spdg~~la~~~~~~g-~~~i~~~d~~~~~~~~l~~~~~~--~~-~~---------~~spdg~~l~~~ 284 (415)
T 2hqs_A 221 ---FPRHNGAPAFSPDGSKLAFALSKTG-SLNLYVMDLASGQIRQVTDGRSN--NT-EP---------TWFPDSQNLAFT 284 (415)
T ss_dssp ---CSSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTTCCEEECCCCSSC--EE-EE---------EECTTSSEEEEE
T ss_pred ---CCCcccCEEEcCCCCEEEEEEecCC-CceEEEEECCCCCEEeCcCCCCc--cc-ce---------EECCCCCEEEEE
Confidence 3446778999999999888776553 44799999999988766543211 10 01 345554 7777
Q ss_pred EecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc
Q 008274 182 SEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG 261 (571)
Q Consensus 182 s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g 261 (571)
++++|..+||++++.+++.++++.....+..+ .|||||++|++.+..++ ...|+.+++ .+. ..+.++....
T Consensus 285 s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~-~~spdG~~l~~~~~~~g--~~~i~~~d~--~~~----~~~~l~~~~~ 355 (415)
T 2hqs_A 285 SDQAGRPQVYKVNINGGAPQRITWEGSQNQDA-DVSSDGKFMVMVSSNGG--QQHIAKQDL--ATG----GVQVLSSTFL 355 (415)
T ss_dssp ECTTSSCEEEEEETTSSCCEECCCSSSEEEEE-EECTTSSEEEEEEECSS--CEEEEEEET--TTC----CEEECCCSSS
T ss_pred ECCCCCcEEEEEECCCCCEEEEecCCCcccCe-EECCCCCEEEEEECcCC--ceEEEEEEC--CCC----CEEEecCCCC
Confidence 77778889999999988888887665455555 49999999999988765 378999998 433 4566765545
Q ss_pred eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 262 KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 262 ~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
...+.|+|||+++++..... ....|+++++. ++..+.|..
T Consensus 356 ~~~~~~spdg~~l~~~s~~~-~~~~l~~~d~~-g~~~~~l~~ 395 (415)
T 2hqs_A 356 DETPSLAPNGTMVIYSSSQG-MGSVLNLVSTD-GRFKARLPA 395 (415)
T ss_dssp CEEEEECTTSSEEEEEEEET-TEEEEEEEETT-SCCEEECCC
T ss_pred cCCeEEcCCCCEEEEEEcCC-CccEEEEEECC-CCcEEEeeC
Confidence 56779999999988876543 34589999984 544555543
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.77 E-value=6.3e-18 Score=162.84 Aligned_cols=211 Identities=13% Similarity=0.084 Sum_probs=135.4
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCC-Cceeecccccccchhhh-HHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGP-CVQLVCDSWINTVDMRA-QYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~-~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
..+++.... +.|.||++||.+ +... ... |...+ ..|++. |.|+++|+||+|.+.....
T Consensus 23 ~~l~y~~~G---------~g~~vvllHG~~~~~~~-~~~----w~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~----- 82 (286)
T 2puj_A 23 FNIHYNEAG---------NGETVIMLHGGGPGAGG-WSN----YYRNVGPFVDAG-YRVILKDSPGFNKSDAVVM----- 82 (286)
T ss_dssp EEEEEEEEC---------CSSEEEEECCCSTTCCH-HHH----HTTTHHHHHHTT-CEEEEECCTTSTTSCCCCC-----
T ss_pred EEEEEEecC---------CCCcEEEECCCCCCCCc-HHH----HHHHHHHHHhcc-CEEEEECCCCCCCCCCCCC-----
Confidence 677666442 125789999974 2111 112 34446 677665 9999999999998753210
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc----c--c---ccc---
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW----D--G---YDT--- 475 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~----~--~---~~~--- 475 (571)
....++++.+.+..+++.- +.+++.|+||||||.+++.++.++|++++++|+.+|.... . . ...
T Consensus 83 --~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 158 (286)
T 2puj_A 83 --DEQRGLVNARAVKGLMDAL--DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFK 158 (286)
T ss_dssp --SSCHHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHH
T ss_pred --cCcCHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHH
Confidence 0122444444444444432 3468999999999999999999999999999998775421 0 0 000
Q ss_pred h-----------hhhhhcCCCC-CChh----hhc----------------------cCCcchhhccCCCcEEEEecCCCC
Q 008274 476 F-----------YTEKYMGLPS-EDPV----GYE----------------------YSSVMHHVHKMKGKLLLVHGMIDE 517 (571)
Q Consensus 476 ~-----------~~~~~~g~~~-~~~~----~~~----------------------~~s~~~~~~~~~~p~lli~G~~D~ 517 (571)
. +.......+. ...+ .+. ..+....+.++++|+|+++|++|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~ 238 (286)
T 2puj_A 159 LYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDR 238 (286)
T ss_dssp HHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCS
T ss_pred HhhCCcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCC
Confidence 0 0000000000 0000 000 011223567788999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 518 NVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 518 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.+|++.+..+.+.+ .+.++++++++||.. ..+....+.+.+.+||++
T Consensus 239 ~~p~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 239 FVPLDHGLKLLWNI----DDARLHVFSKCGAWA-QWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp SSCTHHHHHHHHHS----SSEEEEEESSCCSCH-HHHTHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHC----CCCeEEEeCCCCCCc-cccCHHHHHHHHHHHHhc
Confidence 99999888777655 467999999999986 345678899999999975
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.77 E-value=9.5e-19 Score=166.61 Aligned_cols=212 Identities=16% Similarity=0.078 Sum_probs=136.0
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHHHh
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
+|..+++.... +.|.||++||.+++.. .|...+..|++ +||.|+++|+||+|.+.....
T Consensus 9 ~g~~l~y~~~g---------~~~~vv~lhG~~~~~~-------~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~---- 68 (272)
T 3fsg_A 9 TRSNISYFSIG---------SGTPIIFLHGLSLDKQ-------STCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP---- 68 (272)
T ss_dssp CTTCCEEEEEC---------CSSEEEEECCTTCCHH-------HHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS----
T ss_pred cCCeEEEEEcC---------CCCeEEEEeCCCCcHH-------HHHHHHHHHhccCceEEEEecCCCCCCCCCCCC----
Confidence 56666655432 2367888999876643 23334555666 799999999999987754321
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc-----------
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT----------- 475 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~----------- 475 (571)
...+++.+.+..+++.. .+.+++.++|||+||.+++.++.++|++++++++.+|.........
T Consensus 69 -----~~~~~~~~~~~~~l~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 142 (272)
T 3fsg_A 69 -----STSDNVLETLIEAIEEI-IGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEE 142 (272)
T ss_dssp -----CSHHHHHHHHHHHHHHH-HTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECS
T ss_pred -----CCHHHHHHHHHHHHHHH-hCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhh
Confidence 12333333333333220 1457899999999999999999999999999999887642110000
Q ss_pred ------------hhhhhhcCCCC----------------CCh---hhhc-----cCCcchhhccCCCcEEEEecCCCCCC
Q 008274 476 ------------FYTEKYMGLPS----------------EDP---VGYE-----YSSVMHHVHKMKGKLLLVHGMIDENV 519 (571)
Q Consensus 476 ------------~~~~~~~g~~~----------------~~~---~~~~-----~~s~~~~~~~~~~p~lli~G~~D~~v 519 (571)
.+......... ... ..+. ...+...+.++++|+|+++|++|..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 222 (272)
T 3fsg_A 143 DINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVV 222 (272)
T ss_dssp CCCCCTTGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTT
T ss_pred hhhcccCHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcC
Confidence 00000000000 000 0000 00111134678899999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 520 HFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 520 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+++....+.+.+ .++++++++++||.+. .++...+.+.+.+||++.
T Consensus 223 ~~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 268 (272)
T 3fsg_A 223 GYQEQLKLINHN----ENGEIVLLNRTGHNLM-IDQREAVGFHFDLFLDEL 268 (272)
T ss_dssp CSHHHHHHHTTC----TTEEEEEESSCCSSHH-HHTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhc----CCCeEEEecCCCCCch-hcCHHHHHHHHHHHHHHh
Confidence 999887776654 5689999999999873 356788899999999863
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.3e-18 Score=161.28 Aligned_cols=201 Identities=13% Similarity=0.075 Sum_probs=128.3
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|.||++||.+.+.. .|...+..|+++||.|+++|+||+|.+..... ....+++..+.+..+++.
T Consensus 9 ~g~~vvllHG~~~~~~-------~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~ 74 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAW-------IWYKLKPLLESAGHKVTAVDLSAAGINPRRLD-------EIHTFRDYSEPLMEVMAS 74 (264)
T ss_dssp CCCEEEEECCTTCCGG-------GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCccccc-------hHHHHHHHHHhCCCEEEEeecCCCCCCCCCcc-------cccCHHHHHHHHHHHHHH
Confidence 4477899999876532 34556788988999999999999998753210 011244444444444433
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc--c---hhhh---------h---hcCCCC----
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD--T---FYTE---------K---YMGLPS---- 486 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~---~~~~---------~---~~g~~~---- 486 (571)
-. ..+++.|+||||||.+++.++.++|++++++|+.++........ . .+.. . ..+.+.
T Consensus 75 l~-~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
T 2wfl_A 75 IP-PDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGM 153 (264)
T ss_dssp SC-TTCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEE
T ss_pred hC-CCCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcc
Confidence 11 13689999999999999999999999999999877632110000 0 0000 0 000000
Q ss_pred ---CChhh----hc---------------cC-----------CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHH
Q 008274 487 ---EDPVG----YE---------------YS-----------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA 533 (571)
Q Consensus 487 ---~~~~~----~~---------------~~-----------s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~ 533 (571)
...+. +. .. ..+......++|+|+++|++|..++++.++.+.+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-- 231 (264)
T 2wfl_A 154 SMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESV-- 231 (264)
T ss_dssp EEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHH--
T ss_pred hhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhC--
Confidence 00000 00 00 000000113579999999999999999888887766
Q ss_pred cCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 534 ARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 534 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.+.++++++++||.. ..++...+.+.+.+|+.
T Consensus 232 --p~~~~~~i~~~gH~~-~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 232 --GADKVKEIKEADHMG-MLSQPREVCKCLLDISD 263 (264)
T ss_dssp --CCSEEEEETTCCSCH-HHHSHHHHHHHHHHHHC
T ss_pred --CCceEEEeCCCCCch-hhcCHHHHHHHHHHHhh
Confidence 356899999999987 45677888899999875
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-18 Score=163.45 Aligned_cols=198 Identities=14% Similarity=0.079 Sum_probs=126.5
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|.||++||.+++.. .|...+..|++. |.|+++|+||+|.+.... ...... ..+|+.+.++.+
T Consensus 16 ~~~vvllHG~~~~~~-------~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~-~~~~~~----~a~dl~~~l~~l---- 78 (255)
T 3bf7_A 16 NSPIVLVHGLFGSLD-------NLGVLARDLVND-HNIIQVDVRNHGLSPREP-VMNYPA----MAQDLVDTLDAL---- 78 (255)
T ss_dssp CCCEEEECCTTCCTT-------TTHHHHHHHTTT-SCEEEECCTTSTTSCCCS-CCCHHH----HHHHHHHHHHHH----
T ss_pred CCCEEEEcCCcccHh-------HHHHHHHHHHhh-CcEEEecCCCCCCCCCCC-CcCHHH----HHHHHHHHHHHc----
Confidence 367889999876533 345566777765 999999999998875321 000000 133444444443
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCc--cCCc-ccccchh----------------hhhhcCCCCCCh
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAP--VTSW-DGYDTFY----------------TEKYMGLPSEDP 489 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~--~~~~-~~~~~~~----------------~~~~~g~~~~~~ 489 (571)
..+++.|+||||||.+++.++.++|++++++|+.++ .... ......+ ....+.......
T Consensus 79 --~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T 3bf7_A 79 --QIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEE 156 (255)
T ss_dssp --TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCH
T ss_pred --CCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchh
Confidence 346899999999999999999999999999888643 2110 0000000 000000000000
Q ss_pred --hhh---------ccCCc------------chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCC
Q 008274 490 --VGY---------EYSSV------------MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE 546 (571)
Q Consensus 490 --~~~---------~~~s~------------~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 546 (571)
..+ ..... ...+.++++|+|+++|++|..++++.+..+.+.+ .+.+++++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~ 232 (255)
T 3bf7_A 157 GVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF----PQARAHVIAGA 232 (255)
T ss_dssp HHHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHC----TTEEECCBTTC
T ss_pred HHHHHHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHC----CCCeEEEeCCC
Confidence 000 00000 0123467899999999999999988877776553 56899999999
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 547 RHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 547 ~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
||.+ ..+....+.+.+.+||++|
T Consensus 233 gH~~-~~e~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 233 GHWV-HAEKPDAVLRAIRRYLNDH 255 (255)
T ss_dssp CSCH-HHHCHHHHHHHHHHHHHTC
T ss_pred CCcc-ccCCHHHHHHHHHHHHhcC
Confidence 9987 3456788999999999875
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-17 Score=164.78 Aligned_cols=228 Identities=14% Similarity=0.120 Sum_probs=139.6
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
+.+.+...+.. +|..+++..+. +.|.||++||.+++.. .|...+..|+++||.|+++|+||+|
T Consensus 8 ~~~~~~~~~~~-~g~~l~y~~~G---------~g~~vvllHG~~~~~~-------~w~~~~~~L~~~g~~via~Dl~G~G 70 (328)
T 2cjp_A 8 MKKIEHKMVAV-NGLNMHLAELG---------EGPTILFIHGFPELWY-------SWRHQMVYLAERGYRAVAPDLRGYG 70 (328)
T ss_dssp -CCCEEEEEEE-TTEEEEEEEEC---------SSSEEEEECCTTCCGG-------GGHHHHHHHHTTTCEEEEECCTTST
T ss_pred HhhhheeEecC-CCcEEEEEEcC---------CCCEEEEECCCCCchH-------HHHHHHHHHHHCCcEEEEECCCCCC
Confidence 33444444444 67777776542 1267899999877533 3455678888899999999999999
Q ss_pred CChhh--h--HHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC--
Q 008274 396 RRGLK--F--EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS-- 469 (571)
Q Consensus 396 ~~~~~--~--~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~-- 469 (571)
.+... . ....... ..+|+.+.++.+.. +.+++.|+||||||.+++.++.++|++++++|+.++...
T Consensus 71 ~S~~~~~~~~~~~~~~~----~a~dl~~~l~~l~~----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~ 142 (328)
T 2cjp_A 71 DTTGAPLNDPSKFSILH----LVGDVVALLEAIAP----NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKR 142 (328)
T ss_dssp TCBCCCTTCGGGGSHHH----HHHHHHHHHHHHCT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCC
T ss_pred CCCCcCcCCcccccHHH----HHHHHHHHHHHhcC----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcc
Confidence 87532 0 0000001 13455555555410 256899999999999999999999999999998764321
Q ss_pred -----cc-cccc-----hh----------------------hhhhcC----C----CCC-----------------Chh-
Q 008274 470 -----WD-GYDT-----FY----------------------TEKYMG----L----PSE-----------------DPV- 490 (571)
Q Consensus 470 -----~~-~~~~-----~~----------------------~~~~~g----~----~~~-----------------~~~- 490 (571)
.. .... .+ ...++. . +.. ..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (328)
T 2cjp_A 143 NPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEE 222 (328)
T ss_dssp CSSCCHHHHHHHHHCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHH
T ss_pred cccCChHHHHHhhcccchHHHhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHH
Confidence 00 0000 00 000110 0 000 000
Q ss_pred --hhc----c-----------C-C-c-----chhhccCCCcEEEEecCCCCCCChHHHHHHH--HHHHHcCCCe-eEEEc
Q 008274 491 --GYE----Y-----------S-S-V-----MHHVHKMKGKLLLVHGMIDENVHFRHTARLI--NALVAARKPY-EILIF 543 (571)
Q Consensus 491 --~~~----~-----------~-s-~-----~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~--~~l~~~~~~~-~~~~~ 543 (571)
.+. . . . . ...+.++++|+|+++|++|..+++..+.... +.+.+.-.+. +++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i 302 (328)
T 2cjp_A 223 LDYYANKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVL 302 (328)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEE
T ss_pred HHHHHHHhcccCCcchHHHHHhcccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcCCeeEEEc
Confidence 000 0 0 0 0 0023567899999999999999875433332 3444434566 78999
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 544 PDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 544 ~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
|++||.+ ..+..+.+.+.|.+||++
T Consensus 303 ~~~gH~~-~~e~p~~~~~~i~~fl~~ 327 (328)
T 2cjp_A 303 EGAAHFV-SQERPHEISKHIYDFIQK 327 (328)
T ss_dssp TTCCSCH-HHHSHHHHHHHHHHHHTT
T ss_pred CCCCCCc-chhCHHHHHHHHHHHHHh
Confidence 9999987 345678899999999965
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-18 Score=164.12 Aligned_cols=203 Identities=13% Similarity=0.122 Sum_probs=130.5
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+++.. .| ...+..|++ +|.|+++|+||+|.+........ ....+++..+.+..+.+.-
T Consensus 21 ~~vvllHG~~~~~~---~w----~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~----~~~~~~~~a~dl~~~l~~l- 87 (271)
T 1wom_A 21 ASIMFAPGFGCDQS---VW----NAVAPAFEE-DHRVILFDYVGSGHSDLRAYDLN----RYQTLDGYAQDVLDVCEAL- 87 (271)
T ss_dssp SEEEEECCTTCCGG---GG----TTTGGGGTT-TSEEEECCCSCCSSSCCTTCCTT----GGGSHHHHHHHHHHHHHHT-
T ss_pred CcEEEEcCCCCchh---hH----HHHHHHHHh-cCeEEEECCCCCCCCCCCccccc----ccccHHHHHHHHHHHHHHc-
Confidence 77899999766533 33 334566655 79999999999998753210000 0011333333333333321
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc--------ccc---------------hh----hhhhc
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG--------YDT---------------FY----TEKYM 482 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~--------~~~---------------~~----~~~~~ 482 (571)
+.+++.++||||||.+++.++.++|++++++|+.++...... +.. .+ ....+
T Consensus 88 -~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (271)
T 1wom_A 88 -DLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVL 166 (271)
T ss_dssp -TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred -CCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 346899999999999999999999999999998876432100 000 00 00011
Q ss_pred CCCCCC--hhhh----c---------------cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEE
Q 008274 483 GLPSED--PVGY----E---------------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 541 (571)
Q Consensus 483 g~~~~~--~~~~----~---------------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 541 (571)
+.+... .+.+ . ..+....+.++++|+|+++|++|..++++....+.+.+ .+.+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~----~~~~~~ 242 (271)
T 1wom_A 167 NQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHL----PYSSLK 242 (271)
T ss_dssp CCTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHS----SSEEEE
T ss_pred cCCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHC----CCCEEE
Confidence 111100 0000 0 11222345778899999999999999998877776654 458999
Q ss_pred EcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 542 IFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 542 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+++++||.+ ..+..+.+.+.+.+||++++
T Consensus 243 ~i~~~gH~~-~~e~p~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 243 QMEARGHCP-HMSHPDETIQLIGDYLKAHV 271 (271)
T ss_dssp EEEEESSCH-HHHCHHHHHHHHHHHHHHHC
T ss_pred EeCCCCcCc-cccCHHHHHHHHHHHHHhcC
Confidence 999999986 34567889999999999875
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=149.37 Aligned_cols=181 Identities=10% Similarity=0.025 Sum_probs=121.3
Q ss_pred ceEEEEEcCCCCceeecccccccchhhh-HHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRA-QYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
.|+||++||.+++.. ..| .... ..|+++||.|+++|+|.+... ...+..+.+..+.+.
T Consensus 4 ~p~vv~~HG~~~~~~--~~~----~~~~~~~l~~~g~~v~~~d~~~~~~~---------------~~~~~~~~~~~~~~~ 62 (192)
T 1uxo_A 4 TKQVYIIHGYRASST--NHW----FPWLKKRLLADGVQADILNMPNPLQP---------------RLEDWLDTLSLYQHT 62 (192)
T ss_dssp CCEEEEECCTTCCTT--STT----HHHHHHHHHHTTCEEEEECCSCTTSC---------------CHHHHHHHHHTTGGG
T ss_pred CCEEEEEcCCCCCcc--hhH----HHHHHHHHHhCCcEEEEecCCCCCCC---------------CHHHHHHHHHHHHHh
Confidence 488999999776532 122 2233 468789999999999932211 133344444333332
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCC--eeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCC
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPD--VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK 505 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~ 505 (571)
. ..++.++|||+||.+++.++.++|+ +++++++.+|........... ..+...+ .....+.+++
T Consensus 63 --~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~ 128 (192)
T 1uxo_A 63 --L-HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQML-DEFTQGS----------FDHQKIIESA 128 (192)
T ss_dssp --C-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGG-GGGTCSC----------CCHHHHHHHE
T ss_pred --c-cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccchhh-hhhhhcC----------CCHHHHHhhc
Confidence 2 4789999999999999999999999 999999998875432110000 1111111 1123456677
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCC--CCcHHHHHHHHHHHHHH
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR--HRDRIYMEERIWEFIER 569 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~i~~fl~~ 569 (571)
+|+|+++|++|..++++.+..+.+.+ +.++++++++||.+.. ++....+.+.+.+|+++
T Consensus 129 ~P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 129 KHRAVIASKDDQIVPFSFSKDLAQQI-----DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp EEEEEEEETTCSSSCHHHHHHHHHHT-----TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CCEEEEecCCCCcCCHHHHHHHHHhc-----CceEEEeCCCcCcccccccccHHHHHHHHHHHHHH
Confidence 89999999999999999988887765 4688999999998732 22334456666666654
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.8e-17 Score=159.43 Aligned_cols=125 Identities=18% Similarity=0.151 Sum_probs=85.2
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
+...++..+|..+++..+.++ +.|.||++||++++.. + ......+...||.|+++|+||+|.+..
T Consensus 12 ~~~~~~~~~g~~l~y~~~G~~-------~g~pvvllHG~~~~~~----~----~~~~~~~~~~~~~vi~~D~~G~G~S~~ 76 (313)
T 1azw_A 12 QQGSLKVDDRHTLYFEQCGNP-------HGKPVVMLHGGPGGGC----N----DKMRRFHDPAKYRIVLFDQRGSGRSTP 76 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECT-------TSEEEEEECSTTTTCC----C----GGGGGGSCTTTEEEEEECCTTSTTSBS
T ss_pred ccceEEcCCCCEEEEEecCCC-------CCCeEEEECCCCCccc----c----HHHHHhcCcCcceEEEECCCCCcCCCC
Confidence 455677778888877666432 1255788999876432 1 111233446799999999999998753
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCcc
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV 467 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~ 467 (571)
.. ........++.+.+..+.+.- ..+++.|+||||||.+++.++.++|++++++|+.++.
T Consensus 77 ~~------~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 77 HA------DLVDNTTWDLVADIERLRTHL--GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp TT------CCTTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred Cc------ccccccHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 11 011223455555555555542 3458999999999999999999999999999987764
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=7.4e-18 Score=161.72 Aligned_cols=235 Identities=13% Similarity=0.060 Sum_probs=150.3
Q ss_pred CCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCC--ceeecccccccchhhhHHHHhCCcEEEEECCCCC
Q 008274 318 PPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPC--VQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT 394 (571)
Q Consensus 318 ~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~--~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 394 (571)
+.+.+.+.+. .+.++.+++ |+.. + |+||++||.++ +. ..|... ....+.+++.|+.|+++|.+|.
T Consensus 5 ~~~~~~~~s~~~~~~~~v~~--~p~~-----~-~~v~llHG~~~~~~~---~~w~~~-~~~~~~l~~~~~~vv~pd~~~~ 72 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQF--QGGG-----P-HAVYLLDGLRAQDDY---NGWDIN-TPAFEEYYQSGLSVIMPVGGQS 72 (280)
T ss_dssp CEEEEEEEETTTTEEEEEEE--ECCS-----S-SEEEECCCTTCCSSS---CHHHHH-SCHHHHHTTSSSEEEEECCCTT
T ss_pred eEEEEEEECcccCceeEEEE--cCCC-----C-CEEEEECCCCCCCCc---cccccc-CcHHHHHhcCCeEEEEECCCCC
Confidence 4566677664 455666653 4332 1 48889999853 22 233221 1123567788999999998864
Q ss_pred CCChhhhHHHHh--ccCCCCCchhH--HHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 395 ARRGLKFEASIK--HNCGRIDAEDQ--LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 395 ~~~~~~~~~~~~--~~~~~~~~~D~--~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
+.+.. +..... .........+. .+.+.++.++..++.++++|+|+||||++|+.+++++|++|+++++.+|..++
T Consensus 73 ~~~~~-~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 151 (280)
T 1dqz_A 73 SFYTD-WYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp CTTSB-CSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred ccccC-CCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccc
Confidence 33221 000000 00011122232 23344444433456679999999999999999999999999999999998775
Q ss_pred cccc--ch-----------hhhhhcCCCCCChhhhccCCcchhhccC---CCcEEEEecCCCC--------------CCC
Q 008274 471 DGYD--TF-----------YTEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDE--------------NVH 520 (571)
Q Consensus 471 ~~~~--~~-----------~~~~~~g~~~~~~~~~~~~s~~~~~~~~---~~p~lli~G~~D~--------------~v~ 520 (571)
.... .. .....+|.+. ...+...+|...+.++ .+|++|.||+.|. .++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~ 229 (280)
T 1dqz_A 152 SESWWPTLIGLAMNDSGGYNANSMWGPSS--DPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLT 229 (280)
T ss_dssp TSTTHHHHHHHHHHHTTSCCHHHHHCSTT--SHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHH
T ss_pred cCcchhhhHHHHhhhccCcCHHHhcCCCC--chhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHH
Confidence 4321 00 0112223332 2356666777666665 5799999999997 578
Q ss_pred hHHHHHHHHHHHHcC-CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 521 FRHTARLINALVAAR-KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 521 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
..++.+++++|+++| .++++.++++++|.+. .........+.||.+.
T Consensus 230 ~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~ 277 (280)
T 1dqz_A 230 LRTNQTFRDTYAADGGRNGVFNFPPNGTHSWP---YWNEQLVAMKADIQHV 277 (280)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCceEEEecCCCccChH---HHHHHHHHHHHHHHHH
Confidence 889999999999999 9999999999999762 2344445666777654
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-18 Score=162.45 Aligned_cols=216 Identities=15% Similarity=0.100 Sum_probs=136.9
Q ss_pred CCC-cEEEEEEEcCCCCCCCCCCceEEEEEcCCC-CceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH
Q 008274 327 NDG-TVLYGALYKPDESRYGPPPYKTLISVYGGP-CVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 327 ~dg-~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~-~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
.+| ..+++....+ ++.|.||++||.. +... ...| ...+..|++. |.|+++|+||+|.+.....
T Consensus 20 ~~g~~~l~y~~~G~-------g~~~~vvllHG~~pg~~~-~~~w----~~~~~~L~~~-~~via~Dl~G~G~S~~~~~-- 84 (291)
T 2wue_A 20 VDGPLKLHYHEAGV-------GNDQTVVLLHGGGPGAAS-WTNF----SRNIAVLARH-FHVLAVDQPGYGHSDKRAE-- 84 (291)
T ss_dssp SSSEEEEEEEEECT-------TCSSEEEEECCCCTTCCH-HHHT----TTTHHHHTTT-SEEEEECCTTSTTSCCCSC--
T ss_pred eCCcEEEEEEecCC-------CCCCcEEEECCCCCccch-HHHH----HHHHHHHHhc-CEEEEECCCCCCCCCCCCC--
Confidence 477 7787765532 2236889999974 2211 1233 3346677665 9999999999998753210
Q ss_pred HhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc----c-----cccc
Q 008274 405 IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW----D-----GYDT 475 (571)
Q Consensus 405 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~----~-----~~~~ 475 (571)
....+++..+.+..+++.- +.+++.|+||||||.+++.++.++|++++++|+.++.... . ....
T Consensus 85 -----~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 157 (291)
T 2wue_A 85 -----HGQFNRYAAMALKGLFDQL--GLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKR 157 (291)
T ss_dssp -----CSSHHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHH
T ss_pred -----CCcCHHHHHHHHHHHHHHh--CCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHH
Confidence 0112334443333333321 3468999999999999999999999999999998775321 0 0000
Q ss_pred hh--------------hhhhcCCCCC--------------Chhh----hcc----CC-----cc--hhhccCCCcEEEEe
Q 008274 476 FY--------------TEKYMGLPSE--------------DPVG----YEY----SS-----VM--HHVHKMKGKLLLVH 512 (571)
Q Consensus 476 ~~--------------~~~~~g~~~~--------------~~~~----~~~----~s-----~~--~~~~~~~~p~lli~ 512 (571)
.. .......+.. ++.. +.. .+ .. ..+.++++|+|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~ 237 (291)
T 2wue_A 158 LSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIW 237 (291)
T ss_dssp HHHHHHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEE
T ss_pred HHHHhccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEe
Confidence 00 0000000000 0000 000 00 11 45677889999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 513 GMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 513 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
|++|..++++.+..+.+.+ .+.++++++++||.+ ..++.+.+.+.+.+||++
T Consensus 238 G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 238 GREDRVNPLDGALVALKTI----PRAQLHVFGQCGHWV-QVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp ETTCSSSCGGGGHHHHHHS----TTEEEEEESSCCSCH-HHHTHHHHHHHHHHHTTC
T ss_pred cCCCCCCCHHHHHHHHHHC----CCCeEEEeCCCCCCh-hhhCHHHHHHHHHHHHhc
Confidence 9999999998888776654 467999999999986 345678889999999864
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.7e-18 Score=169.11 Aligned_cols=209 Identities=15% Similarity=0.102 Sum_probs=136.7
Q ss_pred CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhcc
Q 008274 329 GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHN 408 (571)
Q Consensus 329 g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~ 408 (571)
+..+.+..+.+. .|+||++||.++... .| ...+...||.|+++|+||+|.+....
T Consensus 69 ~~~~~~~~~g~~--------~~~vv~~hG~~~~~~-------~~---~~~~~~lg~~Vi~~D~~G~G~S~~~~------- 123 (330)
T 3p2m_A 69 AGAISALRWGGS--------APRVIFLHGGGQNAH-------TW---DTVIVGLGEPALAVDLPGHGHSAWRE------- 123 (330)
T ss_dssp ETTEEEEEESSS--------CCSEEEECCTTCCGG-------GG---HHHHHHSCCCEEEECCTTSTTSCCCS-------
T ss_pred CceEEEEEeCCC--------CCeEEEECCCCCccc-------hH---HHHHHHcCCeEEEEcCCCCCCCCCCC-------
Confidence 344777666432 367899999876533 23 33444559999999999998765211
Q ss_pred CCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc-----------------
Q 008274 409 CGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD----------------- 471 (571)
Q Consensus 409 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~----------------- 471 (571)
......+++.+.+..+++.- +.+++.|+|||+||.+++.++.++|++++++|+.+|.....
T Consensus 124 ~~~~~~~~~a~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (330)
T 3p2m_A 124 DGNYSPQLNSETLAPVLREL--APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALM 201 (330)
T ss_dssp SCBCCHHHHHHHHHHHHHHS--STTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC--------
T ss_pred CCCCCHHHHHHHHHHHHHHh--CCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhh
Confidence 11223455555555555442 45689999999999999999999999999999988643210
Q ss_pred -------cccchhhhhhcCCCCCChhh-----------------------hccC----CcchhhccCCCcEEEEecCCCC
Q 008274 472 -------GYDTFYTEKYMGLPSEDPVG-----------------------YEYS----SVMHHVHKMKGKLLLVHGMIDE 517 (571)
Q Consensus 472 -------~~~~~~~~~~~g~~~~~~~~-----------------------~~~~----s~~~~~~~~~~p~lli~G~~D~ 517 (571)
.............+...... +... .....+.++++|+|+++|++|.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ 281 (330)
T 3p2m_A 202 HGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSG 281 (330)
T ss_dssp ---CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCC
T ss_pred cCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCC
Confidence 00000000000000000000 0000 0123467889999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCee-EEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 518 NVHFRHTARLINALVAARKPYE-ILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 518 ~v~~~~~~~~~~~l~~~~~~~~-~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.++++.+..+.+.+ .+.+ +++++++||.+ ..+..+.+.+.+.+||++
T Consensus 282 ~v~~~~~~~l~~~~----~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 282 FVTDQDTAELHRRA----THFRGVHIVEKSGHSV-QSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp SSCHHHHHHHHHHC----SSEEEEEEETTCCSCH-HHHCHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHhC----CCCeeEEEeCCCCCCc-chhCHHHHHHHHHHHHhc
Confidence 99999888877665 4567 99999999987 446778889999999875
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.76 E-value=6.8e-18 Score=163.64 Aligned_cols=224 Identities=12% Similarity=0.049 Sum_probs=136.7
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.+...+. .+|..+++.... +.|.||++||.+++.. .|...+..|.+ ||.|+++|+||+|.+.
T Consensus 13 ~~~~~~~-~~g~~l~~~~~g---------~~~~vv~lHG~~~~~~-------~~~~~~~~l~~-~~~v~~~D~~G~G~S~ 74 (306)
T 3r40_A 13 FGSEWIN-TSSGRIFARVGG---------DGPPLLLLHGFPQTHV-------MWHRVAPKLAE-RFKVIVADLPGYGWSD 74 (306)
T ss_dssp CEEEEEC-CTTCCEEEEEEE---------CSSEEEEECCTTCCGG-------GGGGTHHHHHT-TSEEEEECCTTSTTSC
T ss_pred CceEEEE-eCCEEEEEEEcC---------CCCeEEEECCCCCCHH-------HHHHHHHHhcc-CCeEEEeCCCCCCCCC
Confidence 3444444 477778777643 2268899999877643 24456778877 9999999999998775
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc----
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD---- 474 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---- 474 (571)
...... .......+++.+.+..+++.- +.+++.|+|||+||.+++.++.++|++++++|+.++........
T Consensus 75 ~~~~~~---~~~~~~~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 149 (306)
T 3r40_A 75 MPESDE---QHTPYTKRAMAKQLIEAMEQL--GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNR 149 (306)
T ss_dssp CCCCCT---TCGGGSHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSH
T ss_pred CCCCCc---ccCCCCHHHHHHHHHHHHHHh--CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhh
Confidence 322100 000123455555555555442 44689999999999999999999999999999998753211000
Q ss_pred ---------------------------chhhhhhc----CC--C-CCChh---hhcc--CCc------------------
Q 008274 475 ---------------------------TFYTEKYM----GL--P-SEDPV---GYEY--SSV------------------ 497 (571)
Q Consensus 475 ---------------------------~~~~~~~~----g~--~-~~~~~---~~~~--~s~------------------ 497 (571)
..+...++ .. . ....+ .+.. ..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (306)
T 3r40_A 150 AYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADF 229 (306)
T ss_dssp HHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHH
T ss_pred hhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccc
Confidence 00000000 00 0 01111 0000 000
Q ss_pred ------chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 498 ------MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 498 ------~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
...+.++++|+|+++|++|..++........+.+ ..+.++.++ ++||.+ ..++...+.+.|.+||++.
T Consensus 230 ~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~-~~gH~~-~~e~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 230 EHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKW---ASDVQGAPI-ESGHFL-PEEAPDQTAEALVRFFSAA 303 (306)
T ss_dssp HHHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHH---BSSEEEEEE-SSCSCH-HHHSHHHHHHHHHHHHHC-
T ss_pred hhhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhh---cCCCeEEEe-cCCcCc-hhhChHHHHHHHHHHHHhc
Confidence 0024778899999999999999855544444443 457788888 689986 4467788999999999863
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=162.23 Aligned_cols=215 Identities=14% Similarity=0.070 Sum_probs=137.2
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.+|.++++.... +.|.||++||.......... |...+..|++. |.|+++|+||+|.+. ...
T Consensus 23 ~~g~~l~y~~~g---------~g~~vvllHG~~~~~~~~~~----~~~~~~~L~~~-~~vi~~Dl~G~G~S~-~~~---- 83 (296)
T 1j1i_A 23 AGGVETRYLEAG---------KGQPVILIHGGGAGAESEGN----WRNVIPILARH-YRVIAMDMLGFGKTA-KPD---- 83 (296)
T ss_dssp ETTEEEEEEEEC---------CSSEEEEECCCSTTCCHHHH----HTTTHHHHTTT-SEEEEECCTTSTTSC-CCS----
T ss_pred ECCEEEEEEecC---------CCCeEEEECCCCCCcchHHH----HHHHHHHHhhc-CEEEEECCCCCCCCC-CCC----
Confidence 367777765432 12568889996411111112 34456677665 999999999998775 110
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcC-CcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc----------cc
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKV-GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY----------DT 475 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~----------~~ 475 (571)
.....++..+.+..+++.- .. +++.|+||||||.+++.++.++|++++++|+.+|....... ..
T Consensus 84 ---~~~~~~~~~~dl~~~l~~l--~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 158 (296)
T 1j1i_A 84 ---IEYTQDRRIRHLHDFIKAM--NFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDF 158 (296)
T ss_dssp ---SCCCHHHHHHHHHHHHHHS--CCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCS
T ss_pred ---CCCCHHHHHHHHHHHHHhc--CCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccC
Confidence 1123444444444444432 23 68999999999999999999999999999988775421000 00
Q ss_pred ------hhhhhhcCCCCC-Chh----------------hhc-----------cCCcchhhccCCCcEEEEecCCCCCCCh
Q 008274 476 ------FYTEKYMGLPSE-DPV----------------GYE-----------YSSVMHHVHKMKGKLLLVHGMIDENVHF 521 (571)
Q Consensus 476 ------~~~~~~~g~~~~-~~~----------------~~~-----------~~s~~~~~~~~~~p~lli~G~~D~~v~~ 521 (571)
.....+...+.. ..+ .+. .......+.++++|+|+++|++|..+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~ 238 (296)
T 1j1i_A 159 TREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPV 238 (296)
T ss_dssp CHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCH
T ss_pred CchHHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCH
Confidence 000011111110 000 000 0011234567889999999999999999
Q ss_pred HHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 522 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+.+..+.+.+ .+.++++++++||.+ ..++.+.+.+.+.+||.+.
T Consensus 239 ~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 282 (296)
T 1j1i_A 239 ETAYKFLDLI----DDSWGYIIPHCGHWA-MIEHPEDFANATLSFLSLR 282 (296)
T ss_dssp HHHHHHHHHC----TTEEEEEESSCCSCH-HHHSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHC----CCCEEEEECCCCCCc-hhcCHHHHHHHHHHHHhcc
Confidence 9888777654 467899999999986 3456788999999999875
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4e-18 Score=163.84 Aligned_cols=213 Identities=14% Similarity=0.108 Sum_probs=136.5
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|..+++.... +.|.||++||.......... |...+..| +.||.|+++|+||+|.+.....
T Consensus 13 ~g~~l~y~~~G---------~g~~vvllHG~~~~~~~~~~----w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~----- 73 (282)
T 1iup_A 13 AGVLTNYHDVG---------EGQPVILIHGSGPGVSAYAN----WRLTIPAL-SKFYRVIAPDMVGFGFTDRPEN----- 73 (282)
T ss_dssp TTEEEEEEEEC---------CSSEEEEECCCCTTCCHHHH----HTTTHHHH-TTTSEEEEECCTTSTTSCCCTT-----
T ss_pred CCEEEEEEecC---------CCCeEEEECCCCCCccHHHH----HHHHHHhh-ccCCEEEEECCCCCCCCCCCCC-----
Confidence 67777766442 12468899995432211112 33345556 6799999999999987753210
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc----------cc---
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG----------YD--- 474 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~----------~~--- 474 (571)
....+++..+.+..+++.- ..+++.|+||||||.+++.+|.++|++++++|+.++...... +.
T Consensus 74 --~~~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 149 (282)
T 1iup_A 74 --YNYSKDSWVDHIIGIMDAL--EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSI 149 (282)
T ss_dssp --CCCCHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCH
T ss_pred --CCCCHHHHHHHHHHHHHHh--CCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcH
Confidence 0123455555444444432 346899999999999999999999999999999876542100 00
Q ss_pred c---hhhhhhc------------------CCCCCChhhhcc-------------CCcchhhccCCCcEEEEecCCCCCCC
Q 008274 475 T---FYTEKYM------------------GLPSEDPVGYEY-------------SSVMHHVHKMKGKLLLVHGMIDENVH 520 (571)
Q Consensus 475 ~---~~~~~~~------------------g~~~~~~~~~~~-------------~s~~~~~~~~~~p~lli~G~~D~~v~ 520 (571)
. .+..... ..+. ....+.. ......+.++++|+|+++|++|..+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p 228 (282)
T 1iup_A 150 ENMRNLLDIFAYDRSLVTDELARLRYEASIQPG-FQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVP 228 (282)
T ss_dssp HHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTT-HHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSC
T ss_pred HHHHHHHHHhhcCcccCCHHHHHHHHhhccChH-HHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCC
Confidence 0 0000000 0000 0000000 00113567788999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 521 FRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 521 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++.+..+.+.+ .+.++++++++||.+ ..++.+.+.+.+.+||++
T Consensus 229 ~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 229 LSSSLRLGELI----DRAQLHVFGRCGHWT-QIEQTDRFNRLVVEFFNE 272 (282)
T ss_dssp HHHHHHHHHHC----TTEEEEEESSCCSCH-HHHSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC----CCCeEEEECCCCCCc-cccCHHHHHHHHHHHHhc
Confidence 99888777654 467999999999986 345678899999999975
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.6e-17 Score=156.28 Aligned_cols=202 Identities=17% Similarity=0.075 Sum_probs=131.3
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|.||++||.+.+.. .|...+..|++.||.|+++|+||+|.+..... ....+++..+.+..+++.-
T Consensus 4 ~~~vvllHG~~~~~~-------~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l 69 (273)
T 1xkl_A 4 GKHFVLVHGACHGGW-------SWYKLKPLLEAAGHKVTALDLAASGTDLRKIE-------ELRTLYDYTLPLMELMESL 69 (273)
T ss_dssp CCEEEEECCTTCCGG-------GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGG-------GCCSHHHHHHHHHHHHHTS
T ss_pred CCeEEEECCCCCCcc-------hHHHHHHHHHhCCCEEEEecCCCCCCCccCcc-------cccCHHHHHHHHHHHHHHh
Confidence 367889999876532 24556788988999999999999988753210 0123455555555555542
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc--c---hhhh---------h---hcCCCCC----
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD--T---FYTE---------K---YMGLPSE---- 487 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~---~~~~---------~---~~g~~~~---- 487 (571)
. ..+++.|+||||||.+++.++.++|++++++|+.++........ . .+.. . ..+.+..
T Consensus 70 ~-~~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (273)
T 1xkl_A 70 S-ADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTS 148 (273)
T ss_dssp C-SSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEE
T ss_pred c-cCCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccc
Confidence 1 13689999999999999999999999999999877642110000 0 0000 0 0000000
Q ss_pred ---Chhh-------------------hccCC-----------cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHc
Q 008274 488 ---DPVG-------------------YEYSS-----------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAA 534 (571)
Q Consensus 488 ---~~~~-------------------~~~~s-----------~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~ 534 (571)
..+. +.... .+......++|+|+++|++|..+|+..++.+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~--- 225 (273)
T 1xkl_A 149 MFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI--- 225 (273)
T ss_dssp EECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH---
T ss_pred cccCHHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhC---
Confidence 0000 00000 00000113579999999999999999888887766
Q ss_pred CCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 535 RKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 535 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.+++++|++||.+ ..+..+.+.+.+.+|+++.
T Consensus 226 -p~~~~~~i~~aGH~~-~~e~P~~~~~~i~~fl~~~ 259 (273)
T 1xkl_A 226 -GVTEAIEIKGADHMA-MLCEPQKLCASLLEIAHKY 259 (273)
T ss_dssp -CCSEEEEETTCCSCH-HHHSHHHHHHHHHHHHHHC
T ss_pred -CCCeEEEeCCCCCCc-hhcCHHHHHHHHHHHHHHh
Confidence 456899999999987 4567788999999999764
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.2e-18 Score=162.43 Aligned_cols=198 Identities=13% Similarity=0.137 Sum_probs=130.5
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+++.. . |...+..|++. |.|+++|+||+|.+..... .....+++.+.+..+++.-
T Consensus 17 ~~vvllHG~~~~~~---~----~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~-------~~~~~~~~~~dl~~~l~~l- 80 (269)
T 2xmz_A 17 QVLVFLHGFLSDSR---T----YHNHIEKFTDN-YHVITIDLPGHGEDQSSMD-------ETWNFDYITTLLDRILDKY- 80 (269)
T ss_dssp EEEEEECCTTCCGG---G----GTTTHHHHHTT-SEEEEECCTTSTTCCCCTT-------SCCCHHHHHHHHHHHHGGG-
T ss_pred CeEEEEcCCCCcHH---H----HHHHHHHHhhc-CeEEEecCCCCCCCCCCCC-------CccCHHHHHHHHHHHHHHc-
Confidence 45889999877643 3 34456777764 9999999999998753210 0123555555555555442
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc---------ch------------hhhhhcCC----
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD---------TF------------YTEKYMGL---- 484 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---------~~------------~~~~~~g~---- 484 (571)
..+++.++||||||.+++.++.++|++++++|+.++........ .. +...+...
T Consensus 81 -~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (269)
T 2xmz_A 81 -KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQ 159 (269)
T ss_dssp -TTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSGGGG
T ss_pred -CCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhCcccc
Confidence 34689999999999999999999999999999988654321100 00 00000000
Q ss_pred -----CC------------CChhh----h------ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCC
Q 008274 485 -----PS------------EDPVG----Y------EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 537 (571)
Q Consensus 485 -----~~------------~~~~~----~------~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~ 537 (571)
+. ..... + ...+....+.++++|+|+++|++|..++..... +.+. -.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~----~~~ 234 (269)
T 2xmz_A 160 SQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANL----IPN 234 (269)
T ss_dssp GGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHH----STT
T ss_pred ccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhh----CCC
Confidence 00 00000 0 001122356778899999999999998876543 4433 357
Q ss_pred eeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 538 YEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 538 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.++++++++||.+. .++...+.+.+.+||++.
T Consensus 235 ~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 235 SKCKLISATGHTIH-VEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp EEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHH
T ss_pred cEEEEeCCCCCChh-hcCHHHHHHHHHHHHHHh
Confidence 89999999999873 356788999999999764
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-17 Score=160.34 Aligned_cols=201 Identities=17% Similarity=0.196 Sum_probs=128.9
Q ss_pred eEEEEEcCCCCceeecccccccchhhh-HHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRA-QYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
|.||++||.+.+...... |...+ ..|++ +|.|+++|+||+|.+..... .....++..+.+..+.+.-
T Consensus 37 ~~vvllHG~~~~~~~~~~----~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~l~~~l~~l 104 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWAN----FSRNIDPLVEA-GYRVILLDCPGWGKSDSVVN-------SGSRSDLNARILKSVVDQL 104 (289)
T ss_dssp SEEEEECCCSTTCCHHHH----TTTTHHHHHHT-TCEEEEECCTTSTTSCCCCC-------SSCHHHHHHHHHHHHHHHT
T ss_pred ceEEEECCCCcccchhHH----HHHhhhHHHhc-CCeEEEEcCCCCCCCCCCCc-------cccCHHHHHHHHHHHHHHh
Confidence 378999996421111122 33345 56665 49999999999997753210 0122445555555555432
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc-c--------c---chh-----------hhhhcCCC
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG-Y--------D---TFY-----------TEKYMGLP 485 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~-~--------~---~~~-----------~~~~~g~~ 485 (571)
+.+++.|+||||||.+++.++.++|++++++|+.++...... + . ..+ .......+
T Consensus 105 --~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (289)
T 1u2e_A 105 --DIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDT 182 (289)
T ss_dssp --TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCT
T ss_pred --CCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCc
Confidence 346899999999999999999999999999998876542100 0 0 000 00000011
Q ss_pred CC-Chh--------------hh------------ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCe
Q 008274 486 SE-DPV--------------GY------------EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPY 538 (571)
Q Consensus 486 ~~-~~~--------------~~------------~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~ 538 (571)
.. ..+ .+ ...+....+.++++|+|+++|++|..++++.+..+.+.+ .+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~----~~~ 258 (289)
T 1u2e_A 183 SDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGI----AGS 258 (289)
T ss_dssp TSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHS----TTC
T ss_pred ccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhC----CCc
Confidence 00 000 00 001122456778899999999999999999888877765 457
Q ss_pred eEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 539 EILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 539 ~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++++++++||.+ ..++...+.+.+.+||++
T Consensus 259 ~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 259 ELHIFRDCGHWA-QWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp EEEEESSCCSCH-HHHTHHHHHHHHHHHHTC
T ss_pred EEEEeCCCCCch-hhcCHHHHHHHHHHHhcC
Confidence 899999999986 335577888999999864
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-17 Score=165.45 Aligned_cols=122 Identities=15% Similarity=0.064 Sum_probs=86.7
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.+|..+++....|++ ++.|+||++||.+++.. . |...+..|+++||.|+++|+||+|.+......
T Consensus 10 ~~g~~l~y~~~G~~~-----~~~~~vv~~hG~~~~~~---~----~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~--- 74 (356)
T 2e3j_A 10 CRGTRIHAVADSPPD-----QQGPLVVLLHGFPESWY---S----WRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQ--- 74 (356)
T ss_dssp ETTEEEEEEEECCTT-----CCSCEEEEECCTTCCGG---G----GTTTHHHHHHTTCEEEEECCTTSTTSCCCCSG---
T ss_pred cCCeEEEEEEecCCC-----CCCCEEEEECCCCCcHH---H----HHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcc---
Confidence 478889888887653 23478999999876543 2 34457888889999999999999876532110
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
......++.+.+..+++.- +.++++++|||+||.+++.++.++|++++++|+.++..
T Consensus 75 ---~~~~~~~~~~~~~~~~~~l--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 75 ---KAYRIKELVGDVVGVLDSY--GAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp ---GGGSHHHHHHHHHHHHHHT--TCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred ---cccCHHHHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 0112334444443333331 45689999999999999999999999999999877644
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-18 Score=171.78 Aligned_cols=212 Identities=11% Similarity=0.061 Sum_probs=131.9
Q ss_pred CceEEEEEcCCCCceeecc--cccc-------cchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCC----Cc
Q 008274 348 PYKTLISVYGGPCVQLVCD--SWIN-------TVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRI----DA 414 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~--~~~~-------~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~----~~ 414 (571)
+.|+||++||++++..... .|.. .+..+++.|+++||.|+++|+||+|.+...... ........ ..
T Consensus 49 ~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~~~~~ 127 (354)
T 2rau_A 49 GNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDR-QLSFTANWGWSTWI 127 (354)
T ss_dssp CEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGG-GGGGGTTCSHHHHH
T ss_pred CCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCccccc-ccccccCCcHHHHH
Confidence 4588999999877643111 2210 011467889999999999999998876532110 00000011 14
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-CCeeEEEEEcCccCCc---c-cc--------cch-----
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSW---D-GY--------DTF----- 476 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-~~~~~~~v~~~~~~~~---~-~~--------~~~----- 476 (571)
+|+.++++++.++ .+.++++++|||+||.+++.++.++ |++++++|+.++.... . .. ...
T Consensus 128 ~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (354)
T 2rau_A 128 SDIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGI 205 (354)
T ss_dssp HHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTC
T ss_pred HHHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhcc
Confidence 6777888887665 2457899999999999999999998 9999999988543211 0 00 000
Q ss_pred ------------------------------------hhh-hh---cCCCC----CChh----hh------------ccCC
Q 008274 477 ------------------------------------YTE-KY---MGLPS----EDPV----GY------------EYSS 496 (571)
Q Consensus 477 ------------------------------------~~~-~~---~g~~~----~~~~----~~------------~~~s 496 (571)
... .+ ...+. .... .+ ...+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (354)
T 2rau_A 206 YVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERD 285 (354)
T ss_dssp CEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTT
T ss_pred cccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCcc
Confidence 000 00 00000 0000 00 0012
Q ss_pred cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC--CCCCcHHHHHHHHHHHHHHh
Q 008274 497 VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP--RRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 497 ~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~--~~~~~~~~~~~~i~~fl~~~ 570 (571)
....+.++++|+|+++|++|.+++. .+ +.+ ..+.+++++|++||.. ..+++...+.+.+.+||+++
T Consensus 286 ~~~~l~~i~~P~Lii~G~~D~~~p~-~~----~~l---~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 286 LKFDYEGILVPTIAFVSERFGIQIF-DS----KIL---PSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp CCCCCTTCCCCEEEEEETTTHHHHB-CG----GGS---CTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred cccccccCCCCEEEEecCCCCCCcc-ch----hhh---ccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 2233457889999999999987652 22 222 3567999999999976 23456788999999999875
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=158.05 Aligned_cols=201 Identities=14% Similarity=-0.007 Sum_probs=129.1
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|...+..|+++||.|+++|+||+|.+..... ....+++..+.+..+++.-.
T Consensus 4 ~~vvllHG~~~~~~-------~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l~ 69 (257)
T 3c6x_A 4 AHFVLIHTICHGAW-------IWHKLKPLLEALGHKVTALDLAASGVDPRQIE-------EIGSFDEYSEPLLTFLEALP 69 (257)
T ss_dssp CEEEEECCTTCCGG-------GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHTHHHHHHHHTSC
T ss_pred CcEEEEcCCccCcC-------CHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcc-------cccCHHHHHHHHHHHHHhcc
Confidence 56888999765432 34557889999999999999999998753110 01224444444444444321
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc--ccc---hhh-------h------------------
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG--YDT---FYT-------E------------------ 479 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~--~~~---~~~-------~------------------ 479 (571)
..+++.|+||||||.+++.++.++|++++++|..++...... ... ... .
T Consensus 70 -~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (257)
T 3c6x_A 70 -PGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKL 148 (257)
T ss_dssp -TTCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEEC
T ss_pred -ccCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccc
Confidence 135899999999999999999999999999988765321000 000 000 0
Q ss_pred ------hhc-CC-CCCChhh---hccC-----------CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCC
Q 008274 480 ------KYM-GL-PSEDPVG---YEYS-----------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKP 537 (571)
Q Consensus 480 ------~~~-g~-~~~~~~~---~~~~-----------s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~ 537 (571)
..+ .. +...... .... .........++|+|+++|++|..+|+..++.+.+.+ .+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~----~~ 224 (257)
T 3c6x_A 149 GFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY----KP 224 (257)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS----CC
T ss_pred cHHHHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHC----CC
Confidence 000 00 0000000 0000 000000112579999999999999999888877765 46
Q ss_pred eeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 538 YEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 538 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+++++|++||.. ..+..+.+.+.+.+|++++
T Consensus 225 ~~~~~i~~~gH~~-~~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 225 DKVYKVEGGDHKL-QLTKTKEIAEILQEVADTY 256 (257)
T ss_dssp SEEEECCSCCSCH-HHHSHHHHHHHHHHHHHHC
T ss_pred CeEEEeCCCCCCc-ccCCHHHHHHHHHHHHHhc
Confidence 7999999999987 4577888999999999763
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.75 E-value=4.4e-18 Score=171.90 Aligned_cols=150 Identities=15% Similarity=0.109 Sum_probs=94.1
Q ss_pred eEEEEEcCC--C--cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeec--ccc--cccchhhhHHHHhCCcEEEEECC
Q 008274 320 DIVQIQAND--G--TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVC--DSW--INTVDMRAQYLRSKGILVWKLDN 391 (571)
Q Consensus 320 ~~~~~~~~d--g--~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~--~~~--~~~~~~~~~~l~~~G~~v~~~d~ 391 (571)
..+.+.+.+ | ..+.++++.|... .+.++.|+|+++||+++..... ..| ...+..++..|+++||.|+++|+
T Consensus 47 ~~i~y~t~~~~g~~~~~~g~l~~P~~~-~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~ 125 (397)
T 3h2g_A 47 AEFTYATIGVEGEPATASGVLLIPGGE-RCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDY 125 (397)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEECT-TCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECC
T ss_pred EEEEEEecCCCCCeEEEEEEEEeCCCC-CCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecC
Confidence 344554433 4 4589999999764 2336789999999987753210 000 11244567888999999999999
Q ss_pred CCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhc-CC-----CeeEEEEEc
Q 008274 392 RGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLAR-FP-----DVFQCAVSG 464 (571)
Q Consensus 392 rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~-~~-----~~~~~~v~~ 464 (571)
||+|.++...............+.|...++..+.++ +..|.++++|+|||+||++++.++.. .+ -.+.+++..
T Consensus 126 ~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~ 205 (397)
T 3h2g_A 126 LGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPI 205 (397)
T ss_dssp TTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEE
T ss_pred CCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecc
Confidence 999876421110000000001244555565555554 44457899999999999999887632 22 257777877
Q ss_pred CccCCc
Q 008274 465 APVTSW 470 (571)
Q Consensus 465 ~~~~~~ 470 (571)
++..++
T Consensus 206 ~~~~~l 211 (397)
T 3h2g_A 206 SGPYAL 211 (397)
T ss_dssp SCCSSH
T ss_pred cccccH
Confidence 776665
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=163.68 Aligned_cols=213 Identities=13% Similarity=0.070 Sum_probs=139.8
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|..+++....+ ++.|.||++||.+++.. . |...+..|++ +|.|+++|+||+|.+....
T Consensus 15 ~g~~l~y~~~G~-------g~~~pvvllHG~~~~~~---~----w~~~~~~L~~-~~~via~Dl~G~G~S~~~~------ 73 (316)
T 3afi_E 15 LGSSMAYRETGA-------QDAPVVLFLHGNPTSSH---I----WRNILPLVSP-VAHCIAPDLIGFGQSGKPD------ 73 (316)
T ss_dssp TTEEEEEEEESC-------TTSCEEEEECCTTCCGG---G----GTTTHHHHTT-TSEEEEECCTTSTTSCCCS------
T ss_pred CCEEEEEEEeCC-------CCCCeEEEECCCCCchH---H----HHHHHHHHhh-CCEEEEECCCCCCCCCCCC------
Confidence 677777765532 12357899999877643 3 3445677765 4999999999999875310
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC---ccccc----------
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS---WDGYD---------- 474 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~---~~~~~---------- 474 (571)
....++++.+.+..+++.- ..+++.|+||||||.+++.++.++|++++++|+.++... +....
T Consensus 74 --~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 149 (316)
T 3afi_E 74 --IAYRFFDHVRYLDAFIEQR--GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDH 149 (316)
T ss_dssp --SCCCHHHHHHHHHHHHHHT--TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHH
T ss_pred --CCCCHHHHHHHHHHHHHHc--CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhcccccc
Confidence 1233555555555555542 346899999999999999999999999999998775321 21100
Q ss_pred -ch-----------------------hhhhhcC--C-CCCCh---hhh-----------------ccCCc----------
Q 008274 475 -TF-----------------------YTEKYMG--L-PSEDP---VGY-----------------EYSSV---------- 497 (571)
Q Consensus 475 -~~-----------------------~~~~~~g--~-~~~~~---~~~-----------------~~~s~---------- 497 (571)
.. +...++. . ..... +.| .....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (316)
T 3afi_E 150 AEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEA 229 (316)
T ss_dssp HHHHHHHHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHH
T ss_pred chhHHHHHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhH
Confidence 00 0000000 0 00000 000 00000
Q ss_pred ----chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 498 ----MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 498 ----~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
...+.++++|+|+++|++|..++++.++.+.+.+ .+.+++++|++||.+ ..+....+.+.|.+||++.
T Consensus 230 ~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~GH~~-~~e~p~~~~~~i~~fl~~~ 301 (316)
T 3afi_E 230 LQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASL----TRCALIRLGAGLHYL-QEDHADAIGRSVAGWIAGI 301 (316)
T ss_dssp HHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS----SSEEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhC----CCCeEEEcCCCCCCc-hhhCHHHHHHHHHHHHhhc
Confidence 0123457899999999999999988877776654 567999999999987 4467888999999999763
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-17 Score=162.20 Aligned_cols=211 Identities=12% Similarity=-0.015 Sum_probs=136.9
Q ss_pred EcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH
Q 008274 325 QANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 325 ~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
...+|..+++..+. ..|.||++||.+++.. . |...+..|+++ |.|+++|+||+|.+...
T Consensus 15 ~~~~g~~l~~~~~g---------~~~~vv~lHG~~~~~~---~----~~~~~~~L~~~-~~vi~~D~~G~G~S~~~---- 73 (301)
T 3kda_A 15 REVDGVKLHYVKGG---------QGPLVMLVHGFGQTWY---E----WHQLMPELAKR-FTVIAPDLPGLGQSEPP---- 73 (301)
T ss_dssp EEETTEEEEEEEEE---------SSSEEEEECCTTCCGG---G----GTTTHHHHTTT-SEEEEECCTTSTTCCCC----
T ss_pred EeeCCeEEEEEEcC---------CCCEEEEECCCCcchh---H----HHHHHHHHHhc-CeEEEEcCCCCCCCCCC----
Confidence 33478888877653 2368899999877643 2 44567888887 99999999999987642
Q ss_pred HhccCCCCCchhHHHHHHHHHHcCCCcCCc-EEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-c--------
Q 008274 405 IKHNCGRIDAEDQLTGAEWLIKQGLAKVGH-IGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY-D-------- 474 (571)
Q Consensus 405 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~-~-------- 474 (571)
......+++.+.+..+++.- +.++ +.|+|||+||.+++.++.++|++++++|+.+|....... .
T Consensus 74 ----~~~~~~~~~~~~l~~~l~~l--~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 147 (301)
T 3kda_A 74 ----KTGYSGEQVAVYLHKLARQF--SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQG 147 (301)
T ss_dssp ----SSCSSHHHHHHHHHHHHHHH--CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTE
T ss_pred ----CCCccHHHHHHHHHHHHHHc--CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchh
Confidence 11223455555554444431 3456 999999999999999999999999999998875321000 0
Q ss_pred -------------chhh------------hhhc----CCCC-CChh---hhcc--CC-----------------------
Q 008274 475 -------------TFYT------------EKYM----GLPS-EDPV---GYEY--SS----------------------- 496 (571)
Q Consensus 475 -------------~~~~------------~~~~----g~~~-~~~~---~~~~--~s----------------------- 496 (571)
.... ..++ ..+. ...+ .+.. ..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (301)
T 3kda_A 148 ESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAE 227 (301)
T ss_dssp ECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhccc
Confidence 0000 0000 0000 0000 0000 00
Q ss_pred cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 497 VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 497 ~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
....+.++++|+|+++|++| ++......+.+ ...++++++++++||.+ ..++.+.+.+.|.+|+++
T Consensus 228 ~~~~l~~i~~P~l~i~G~~D--~~~~~~~~~~~----~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~~l~~ 293 (301)
T 3kda_A 228 LAKTRLQMPTMTLAGGGAGG--MGTFQLEQMKA----YAEDVEGHVLPGCGHWL-PEECAAPMNRLVIDFLSR 293 (301)
T ss_dssp HTTSCBCSCEEEEEECSTTS--CTTHHHHHHHT----TBSSEEEEEETTCCSCH-HHHTHHHHHHHHHHHHTT
T ss_pred chhhccccCcceEEEecCCC--CChhHHHHHHh----hcccCeEEEcCCCCcCc-hhhCHHHHHHHHHHHHhh
Confidence 00112278899999999999 56665555433 34678999999999987 457788899999999875
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=5.2e-18 Score=170.61 Aligned_cols=223 Identities=12% Similarity=-0.001 Sum_probs=147.4
Q ss_pred CCCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcE----EEEEC
Q 008274 316 LEPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGIL----VWKLD 390 (571)
Q Consensus 316 ~~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~----v~~~d 390 (571)
..+.+.+.+.+. .|..+.+++|.|+++ ..+++|+|+++||+..... ......++.|+++|++ |+++|
T Consensus 165 ~G~v~~~~~~S~~~g~~~~~~vy~P~~~--~~~~~PvlvllHG~~~~~~------~~~~~~~~~l~~~g~~~p~iVV~~d 236 (403)
T 3c8d_A 165 EIPAKEIIWKSERLKNSRRVWIFTTGDV--TAEERPLAVLLDGEFWAQS------MPVWPVLTSLTHRQQLPPAVYVLID 236 (403)
T ss_dssp SSCCEEEEEEETTTTEEEEEEEEEC-------CCCCEEEESSHHHHHHT------SCCHHHHHHHHHTTSSCSCEEEEEC
T ss_pred CCceEEEEEEccccCCcEEEEEEeCCCC--CCCCCCEEEEeCCHHHhhc------CcHHHHHHHHHHcCCCCCeEEEEEC
Confidence 456778888775 567899999999864 2468999999999533211 1223356778888875 99999
Q ss_pred CCCCCCChhhhHHHHhccCCCCCchhH--HHHHHHHHHcC--CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCc
Q 008274 391 NRGTARRGLKFEASIKHNCGRIDAEDQ--LTGAEWLIKQG--LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAP 466 (571)
Q Consensus 391 ~rG~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~ 466 (571)
++|+.++..++ . ......+. .+++.++.++. ..|+++++|+|+||||++++.++.++|++|+++++.+|
T Consensus 237 ~~~~~~r~~~~-----~--~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg 309 (403)
T 3c8d_A 237 AIDTTHRAHEL-----P--CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSG 309 (403)
T ss_dssp CCSHHHHHHHS-----S--SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESC
T ss_pred CCCCccccccC-----C--ChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEecc
Confidence 98632211111 0 00112222 24566666542 35789999999999999999999999999999999999
Q ss_pred cCCcccccchhhhhhcCCCCCCh-hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCC
Q 008274 467 VTSWDGYDTFYTEKYMGLPSEDP-VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD 545 (571)
Q Consensus 467 ~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 545 (571)
...|..... .+.... +.+.. ........|++|+||+.|..+ ..++.+++++|+++|.++++.++|+
T Consensus 310 ~~~~~~~~~--------~~~~~~~~~~~~----~~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G 376 (403)
T 3c8d_A 310 SYWWPHRGG--------QQEGVLLEKLKA----GEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG 376 (403)
T ss_dssp CTTTTCTTS--------SSCCHHHHHHHT----TSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC
T ss_pred ccccCCCCC--------CcHHHHHHHHHh----ccccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 875432110 000000 01110 011334578999999998654 6789999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 546 ERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 546 ~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+|.+ ..........+.||.+.
T Consensus 377 -gH~~---~~w~~~l~~~l~~l~~~ 397 (403)
T 3c8d_A 377 -GHDA---LCWRGGLMQGLIDLWQP 397 (403)
T ss_dssp -CSCH---HHHHHHHHHHHHHHHGG
T ss_pred -CCCH---HHHHHHHHHHHHHHhcc
Confidence 6975 23344556677887654
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.6e-17 Score=159.16 Aligned_cols=213 Identities=10% Similarity=0.003 Sum_probs=133.0
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.+|..+++.... ..|.||++||.+++.. .|...+..|++. |.|+++|+||+|.+... ..
T Consensus 16 ~~g~~l~y~~~G---------~g~~lvllHG~~~~~~-------~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-~~--- 74 (294)
T 1ehy_A 16 LPDVKIHYVREG---------AGPTLLLLHGWPGFWW-------EWSKVIGPLAEH-YDVIVPDLRGFGDSEKP-DL--- 74 (294)
T ss_dssp CSSCEEEEEEEE---------CSSEEEEECCSSCCGG-------GGHHHHHHHHTT-SEEEEECCTTSTTSCCC-CT---
T ss_pred ECCEEEEEEEcC---------CCCEEEEECCCCcchh-------hHHHHHHHHhhc-CEEEecCCCCCCCCCCC-cc---
Confidence 477778776543 1256888999877643 345567778775 99999999999987642 10
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC-cc--c-----------
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS-WD--G----------- 472 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~-~~--~----------- 472 (571)
.......++++.+.+..+++.- ..+++.|+||||||.+++.++.++|++++++|+.++... .. .
T Consensus 75 ~~~~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 152 (294)
T 1ehy_A 75 NDLSKYSLDKAADDQAALLDAL--GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWY 152 (294)
T ss_dssp TCGGGGCHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHH
T ss_pred ccccCcCHHHHHHHHHHHHHHc--CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceE
Confidence 0000122444555454444432 346899999999999999999999999999998875321 10 0
Q ss_pred --cc-chh---------------hhhhc----CCCC-CCh---hhhcc----C---------------Ccch-----hhc
Q 008274 473 --YD-TFY---------------TEKYM----GLPS-EDP---VGYEY----S---------------SVMH-----HVH 502 (571)
Q Consensus 473 --~~-~~~---------------~~~~~----g~~~-~~~---~~~~~----~---------------s~~~-----~~~ 502 (571)
+. ... ...++ ..+. ... +.+.. . .... .+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (294)
T 1ehy_A 153 SQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHT 232 (294)
T ss_dssp HHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGS
T ss_pred EEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccC
Confidence 00 000 00000 0010 000 01100 0 0000 123
Q ss_pred cCCCcEEEEecCCCCCCCh-HHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 503 KMKGKLLLVHGMIDENVHF-RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 503 ~~~~p~lli~G~~D~~v~~-~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
++++|+|+++|++|..++. .....+.+. -.+.+++++|++||.+ ..++...+.+.+.+||
T Consensus 233 ~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 233 MSDLPVTMIWGLGDTCVPYAPLIEFVPKY----YSNYTMETIEDCGHFL-MVEKPEIAIDRIKTAF 293 (294)
T ss_dssp CBCSCEEEEEECCSSCCTTHHHHHHHHHH----BSSEEEEEETTCCSCH-HHHCHHHHHHHHHHHC
T ss_pred cCCCCEEEEEeCCCCCcchHHHHHHHHHH----cCCCceEEeCCCCCCh-hhhCHHHHHHHHHHHh
Confidence 7889999999999999884 444444443 3578999999999986 4466788888898886
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=7.7e-18 Score=172.98 Aligned_cols=212 Identities=14% Similarity=0.114 Sum_probs=135.4
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhH---HHHhCCcEEEEECCCCC--CCChhhhHHHH-------hccCCCCCchh
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQ---YLRSKGILVWKLDNRGT--ARRGLKFEASI-------KHNCGRIDAED 416 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~---~l~~~G~~v~~~d~rG~--~~~~~~~~~~~-------~~~~~~~~~~D 416 (571)
.|+||++||.+++......|. ..+. .|.+.||.|+++|+||+ |.+........ ........++|
T Consensus 109 ~p~vvllHG~~~~~~~~~~w~----~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~ 184 (444)
T 2vat_A 109 DNCVIVCHTLTSSAHVTSWWP----TLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRD 184 (444)
T ss_dssp CCEEEEECCTTCCSCGGGTCG----GGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHH
T ss_pred CCeEEEECCCCcccchhhHHH----HhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccccccccccccccHHH
Confidence 478999999877654211132 2232 46678999999999994 55432100000 00111234566
Q ss_pred HHHHHHHHHHcCCCcCCc-EEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc---------------------
Q 008274 417 QLTGAEWLIKQGLAKVGH-IGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD--------------------- 474 (571)
Q Consensus 417 ~~~~~~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--------------------- 474 (571)
+.+.+..+++.- ..++ ++|+||||||.+++.++.++|++++++|+.++........
T Consensus 185 ~a~dl~~ll~~l--~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (444)
T 2vat_A 185 DVRIHRQVLDRL--GVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQCIYDDPKYLDGE 262 (444)
T ss_dssp HHHHHHHHHHHH--TCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHHHHHSTTSGGGT
T ss_pred HHHHHHHHHHhc--CCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHHHHHhcCCcccccc
Confidence 666665555542 3457 9999999999999999999999999999988765421000
Q ss_pred -------------------------chhhhhhcCCCC-------------------------------CChhhh------
Q 008274 475 -------------------------TFYTEKYMGLPS-------------------------------EDPVGY------ 492 (571)
Q Consensus 475 -------------------------~~~~~~~~g~~~-------------------------------~~~~~~------ 492 (571)
..+...+..... ...+.|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (444)
T 2vat_A 263 YDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQ 342 (444)
T ss_dssp CCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CGGGHHHHHHHHHH
T ss_pred ccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCchhhHHHHHHHHHH
Confidence 000011111110 000000
Q ss_pred ---cc---------------C--------CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcC-C
Q 008274 493 ---EY---------------S--------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP-D 545 (571)
Q Consensus 493 ---~~---------------~--------s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~ 545 (571)
.. . +....+.++++|+|+++|++|..++++.++.+.+.+ .++++++++ +
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~----p~~~~~~i~~~ 418 (444)
T 2vat_A 343 KFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSI----PNSRLCVVDTN 418 (444)
T ss_dssp HHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHS----TTEEEEECCCS
T ss_pred HHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHC----CCcEEEEeCCC
Confidence 00 0 133446778899999999999999999888887765 468999999 8
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 546 ERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 546 ~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+||.+ ..+....+.+.+.+||+++|
T Consensus 419 ~GH~~-~~e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 419 EGHDF-FVMEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp CGGGH-HHHTHHHHHHHHHHHHTC--
T ss_pred CCcch-HHhCHHHHHHHHHHHHHHhc
Confidence 99986 33567889999999998764
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=156.14 Aligned_cols=210 Identities=15% Similarity=0.071 Sum_probs=129.1
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh--------hhH---HHH-hccC----C
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL--------KFE---ASI-KHNC----G 410 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~--------~~~---~~~-~~~~----~ 410 (571)
++.|.||++||..++.. .|......+++.|.+.||.|+.+|+|+...... .+. ... ...+ .
T Consensus 3 ~~~~~vl~lHG~g~~~~---~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~ 79 (243)
T 1ycd_A 3 VQIPKLLFLHGFLQNGK---VFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSE 79 (243)
T ss_dssp CCCCEEEEECCTTCCHH---HHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCS
T ss_pred CcCceEEEeCCCCccHH---HHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCC
Confidence 35689999999776643 333223345677778899999999994321100 000 000 0011 1
Q ss_pred CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC------CeeEEEEEcCccCCcccccchhhhhhcCC
Q 008274 411 RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP------DVFQCAVSGAPVTSWDGYDTFYTEKYMGL 484 (571)
Q Consensus 411 ~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 484 (571)
.....|+.++++++.+....+..+++|+||||||.+|+.++.+++ ..+++++..++........ .+.+.
T Consensus 80 ~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~-----~~~~~ 154 (243)
T 1ycd_A 80 ISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP-----EHPGE 154 (243)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT-----TSTTC
T ss_pred CcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc-----ccccc
Confidence 112456777777776542224568999999999999999988642 2466777776654321110 00000
Q ss_pred CCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC---CCeeEEEcCCCCCCCCCCCcHHHHHH
Q 008274 485 PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR---KPYEILIFPDERHMPRRHRDRIYMEE 561 (571)
Q Consensus 485 ~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~~ 561 (571)
... ...+. ..+..+.++++|+|++||++|..+|++.+..+++.+...+ ......+++++||.+... ..+.+
T Consensus 155 ~~~-~~~~~--~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~---~~~~~ 228 (243)
T 1ycd_A 155 LRI-TEKFR--DSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK---KDIIR 228 (243)
T ss_dssp EEE-CGGGT--TTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC---HHHHH
T ss_pred ccc-chhHH--HhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch---HHHHH
Confidence 000 00010 1122345678999999999999999999999999887652 112344667789987432 35889
Q ss_pred HHHHHHHHh
Q 008274 562 RIWEFIERT 570 (571)
Q Consensus 562 ~i~~fl~~~ 570 (571)
.+.+||+++
T Consensus 229 ~i~~fl~~~ 237 (243)
T 1ycd_A 229 PIVEQITSS 237 (243)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999875
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-17 Score=157.64 Aligned_cols=211 Identities=12% Similarity=0.085 Sum_probs=133.9
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|..+++..+.++ ..|+||++||.+++.. . |...+..|++ +|.|+++|+||+|.+...
T Consensus 7 ~g~~l~~~~~g~~-------~~~~vv~lHG~~~~~~---~----~~~~~~~L~~-~~~v~~~D~~G~G~S~~~------- 64 (264)
T 3ibt_A 7 NGTLMTYSESGDP-------HAPTLFLLSGWCQDHR---L----FKNLAPLLAR-DFHVICPDWRGHDAKQTD------- 64 (264)
T ss_dssp TTEECCEEEESCS-------SSCEEEEECCTTCCGG---G----GTTHHHHHTT-TSEEEEECCTTCSTTCCC-------
T ss_pred CCeEEEEEEeCCC-------CCCeEEEEcCCCCcHh---H----HHHHHHHHHh-cCcEEEEccccCCCCCCC-------
Confidence 6667776665442 2378999999877643 2 4446677754 599999999999877642
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-CCeeEEEEEcCccCCccc--------------
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWDG-------------- 472 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-~~~~~~~v~~~~~~~~~~-------------- 472 (571)
......+++.+.+..+.+.- +.+++.++|||+||.+++.++.++ |++++++|+.+|......
T Consensus 65 -~~~~~~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 141 (264)
T 3ibt_A 65 -SGDFDSQTLAQDLLAFIDAK--GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTE 141 (264)
T ss_dssp -CSCCCHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTT
T ss_pred -ccccCHHHHHHHHHHHHHhc--CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchhhcccChhh
Confidence 11223455555555555442 446899999999999999999999 999999999887651100
Q ss_pred ---ccchhhhhhcCCCCC--------------Chhhhc------------cCCcchhhccCCCcEEEEecCCCCCC--Ch
Q 008274 473 ---YDTFYTEKYMGLPSE--------------DPVGYE------------YSSVMHHVHKMKGKLLLVHGMIDENV--HF 521 (571)
Q Consensus 473 ---~~~~~~~~~~g~~~~--------------~~~~~~------------~~s~~~~~~~~~~p~lli~G~~D~~v--~~ 521 (571)
........++..... ....+. ..++...+.++++|+|++||..|... ++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~ 221 (264)
T 3ibt_A 142 YVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYR 221 (264)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHH
T ss_pred HHHHHHHHHHHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhH
Confidence 000000111111000 000010 01122556788999999987544433 34
Q ss_pred HHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 522 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.....+.+ .-.+.++++++++||.+ ..++...+.+.+.+||+
T Consensus 222 ~~~~~~~~----~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 222 QLQLEFAA----GHSWFHPRHIPGRTHFP-SLENPVAVAQAIREFLQ 263 (264)
T ss_dssp HHHHHHHH----HCTTEEEEECCCSSSCH-HHHCHHHHHHHHHHHTC
T ss_pred HHHHHHHH----hCCCceEEEcCCCCCcc-hhhCHHHHHHHHHHHHh
Confidence 43444433 34678999999999976 34567888899999985
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.72 E-value=8.6e-18 Score=162.25 Aligned_cols=214 Identities=12% Similarity=0.040 Sum_probs=139.2
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.+|..+++..+.+ .|+||++||.+++.. .| ..++..|++ +|.|+++|+||+|.+.....
T Consensus 15 ~~g~~l~~~~~g~---------~~~vv~lHG~~~~~~---~~----~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~---- 73 (297)
T 2qvb_A 15 IAGKRMAYIDEGK---------GDAIVFQHGNPTSSY---LW----RNIMPHLEG-LGRLVACDLIGMGASDKLSP---- 73 (297)
T ss_dssp ETTEEEEEEEESS---------SSEEEEECCTTCCGG---GG----TTTGGGGTT-SSEEEEECCTTSTTSCCCSS----
T ss_pred ECCEEEEEEecCC---------CCeEEEECCCCchHH---HH----HHHHHHHhh-cCeEEEEcCCCCCCCCCCCC----
Confidence 3677787765532 278999999877643 23 334556655 59999999999987753210
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcC-CcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC---cccccc-------
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKV-GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS---WDGYDT------- 475 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------- 475 (571)
........++..+.+..+++.- +. +++.++|||+||.+++.++.++|++++++|+.+|... +.....
T Consensus 74 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 151 (297)
T 2qvb_A 74 SGPDRYSYGEQRDFLFALWDAL--DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQ 151 (297)
T ss_dssp CSTTSSCHHHHHHHHHHHHHHT--TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHH
T ss_pred ccccCcCHHHHHHHHHHHHHHc--CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHH
Confidence 0011133555555555555442 34 6899999999999999999999999999999888653 111000
Q ss_pred ---------------hhhhhhcC---CCCCCh---hhh------------------ccC--------------Ccchhhc
Q 008274 476 ---------------FYTEKYMG---LPSEDP---VGY------------------EYS--------------SVMHHVH 502 (571)
Q Consensus 476 ---------------~~~~~~~g---~~~~~~---~~~------------------~~~--------------s~~~~~~ 502 (571)
.+...++. ...... ..+ ... +....+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (297)
T 2qvb_A 152 GFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLE 231 (297)
T ss_dssp HHTSTTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHH
T ss_pred HHhcccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcc
Confidence 00000000 000000 000 000 1123456
Q ss_pred cCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 503 KMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 503 ~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++++|+|+++|++|..++++....+.+.+ .+ +++++ ++||.+ ..++...+.+.+.+||+++
T Consensus 232 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~----~~-~~~~~-~~gH~~-~~~~p~~~~~~i~~fl~~~ 292 (297)
T 2qvb_A 232 ETDMPKLFINAEPGAIITGRIRDYVRSWP----NQ-TEITV-PGVHFV-QEDSPEEIGAAIAQFVRRL 292 (297)
T ss_dssp HCCSCEEEEEEEECSSSCHHHHHHHHTSS----SE-EEEEE-EESSCG-GGTCHHHHHHHHHHHHHHH
T ss_pred cccccEEEEecCCCCcCCHHHHHHHHHHc----CC-eEEEe-cCccch-hhhCHHHHHHHHHHHHHHH
Confidence 78899999999999999998877776544 34 88889 999987 4467888999999999874
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.72 E-value=7.7e-17 Score=143.73 Aligned_cols=168 Identities=11% Similarity=0.011 Sum_probs=119.9
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCc---EEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGI---LVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~---~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
.|+||++||..++.. .|..+++.|+++|| .|+++|+||.+.+.... .+++.+.+..+.
T Consensus 3 ~~~vv~~HG~~~~~~-------~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~~~------------~~~~~~~~~~~~ 63 (181)
T 1isp_A 3 HNPVVMVHGIGGASF-------NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNN------------GPVLSRFVQKVL 63 (181)
T ss_dssp CCCEEEECCTTCCGG-------GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHH------------HHHHHHHHHHHH
T ss_pred CCeEEEECCcCCCHh-------HHHHHHHHHHHcCCCCccEEEEecCCCCCchhhh------------HHHHHHHHHHHH
Confidence 367889999776533 34557888999998 69999999988765311 233444444444
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhcc
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHK 503 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~ 503 (571)
++. +.+++.++||||||.+++.++.++ |++++++|+.+|........ ..+ ... ..
T Consensus 64 ~~~--~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~--------~~~--------~~~-----~~ 120 (181)
T 1isp_A 64 DET--GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK--------ALP--------GTD-----PN 120 (181)
T ss_dssp HHH--CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB--------CCC--------CSC-----TT
T ss_pred HHc--CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCcccccccc--------cCC--------CCC-----Cc
Confidence 331 456899999999999999999987 88999999998875431110 000 000 11
Q ss_pred CCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 504 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 504 ~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.+.|+|+++|++|..++++.+. -...+++++++++|.+... + ..+.+.+.+||.+
T Consensus 121 ~~~p~l~i~G~~D~~v~~~~~~---------~~~~~~~~~~~~gH~~~~~-~-~~~~~~i~~fl~~ 175 (181)
T 1isp_A 121 QKILYTSIYSSADMIVMNYLSR---------LDGARNVQIHGVGHIGLLY-S-SQVNSLIKEGLNG 175 (181)
T ss_dssp CCCEEEEEEETTCSSSCHHHHC---------CBTSEEEEESSCCTGGGGG-C-HHHHHHHHHHHTT
T ss_pred cCCcEEEEecCCCccccccccc---------CCCCcceeeccCchHhhcc-C-HHHHHHHHHHHhc
Confidence 2469999999999999987431 3567899999999987433 3 3689999999975
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.72 E-value=9.8e-17 Score=155.69 Aligned_cols=197 Identities=16% Similarity=0.108 Sum_probs=131.3
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhC--CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
..|.||++||.+++.. .|...++.|+++ ||.|+++|+||+|.+...... .++|+.+.+..+.
T Consensus 35 ~~~~vvllHG~~~~~~-------~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~~---------~~~~~~~~l~~~~ 98 (302)
T 1pja_A 35 SYKPVIVVHGLFDSSY-------SFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWE---------QVQGFREAVVPIM 98 (302)
T ss_dssp CCCCEEEECCTTCCGG-------GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHH---------HHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCChh-------HHHHHHHHHHhcCCCcEEEEeccCCCccchhhHHH---------HHHHHHHHHHHHh
Confidence 4577889999776543 355678889888 999999999999766533211 2556666666666
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCC-eeEEEEEcCccCCccccc-chh-------------------------h
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGAPVTSWDGYD-TFY-------------------------T 478 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~-------------------------~ 478 (571)
+.. .+++.++||||||.+++.++.++|+ +++++|+.++........ ... .
T Consensus 99 ~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (302)
T 1pja_A 99 AKA---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSI 175 (302)
T ss_dssp HHC---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGGGSTG
T ss_pred hcC---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHHHhhh
Confidence 543 4689999999999999999999999 799999887654321110 000 0
Q ss_pred hhhcCCCCCChhhhc----------cC----C---cchhhccCCCcEEEEecCCCCCCChHHHHHHHH------------
Q 008274 479 EKYMGLPSEDPVGYE----------YS----S---VMHHVHKMKGKLLLVHGMIDENVHFRHTARLIN------------ 529 (571)
Q Consensus 479 ~~~~g~~~~~~~~~~----------~~----s---~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~------------ 529 (571)
..+...+.. ...+. .. . ....+.+++ |+|+++|++|..++++.+..+.+
T Consensus 176 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 1pja_A 176 CNYWHDPHH-DDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEE 253 (302)
T ss_dssp GGGBCCTTC-HHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGG
T ss_pred hhcccChhh-hhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhh
Confidence 000011110 01110 00 0 123456778 99999999999999887766632
Q ss_pred ------------HHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 530 ------------ALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 530 ------------~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
.+... .+++++++|++||.. ..++.+.+.+.+.+||
T Consensus 254 ~~~~~~~~~~~~~l~~~-~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 254 QLVYLRDSFGLKTLLAR-GAIVRCPMAGISHTA-WHSNRTLYETCIEPWL 301 (302)
T ss_dssp SHHHHTTTTSHHHHHHT-TCEEEEECSSCCTTT-TTSCHHHHHHHTGGGC
T ss_pred hhhhhhhhhchhhHhhc-CCeEEEEecCccccc-cccCHHHHHHHHHHhc
Confidence 22222 348999999999987 4456778888888776
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=6.7e-17 Score=154.39 Aligned_cols=227 Identities=12% Similarity=0.067 Sum_probs=140.4
Q ss_pred CCCCCCeEEEEEcCC-CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECC
Q 008274 314 LQLEPPDIVQIQAND-GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDN 391 (571)
Q Consensus 314 ~~~~~~~~~~~~~~d-g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~ 391 (571)
..+...+.+.+.+.. +..+.+++|.|+++. ..+++|||+++||+..... ......+.+++ .+..||.+++
T Consensus 8 ~~~~~~~~~~~~S~~~~~~~~~~vylP~~y~-~~~~yPvly~l~G~~~~~~-------~~~~~~~~l~~~~~~ivV~v~~ 79 (278)
T 2gzs_A 8 SVFYHFSATSFDSVDGTRHYRVWTAVPNTTA-PASGYPILYMLDGNAVMDR-------LDDELLKQLSEKTPPVIVAVGY 79 (278)
T ss_dssp CSSEEEEEEEEECTTSSCEEEEEEEEESSCC-CTTCEEEEEESSHHHHHHH-------CCHHHHHHHTTSCCCEEEEEEE
T ss_pred CCCCceEEEEEEcCCCCceEEEEEECCCCCC-CCCCCCEEEEeeChhHHHH-------HHHHHHHHhccCCCeEEEEEcC
Confidence 345667888888876 678999999998863 3478999877777532211 11123455554 7888998998
Q ss_pred CCCCC-----ChhhhHHHHhccCC---C----CCchhHHHHHHHH--------HHcCCCcCCcEEEEeechHHHHHHHHH
Q 008274 392 RGTAR-----RGLKFEASIKHNCG---R----IDAEDQLTGAEWL--------IKQGLAKVGHIGLYGWSYGGYLSAITL 451 (571)
Q Consensus 392 rG~~~-----~~~~~~~~~~~~~~---~----~~~~D~~~~~~~l--------~~~~~~d~~~i~l~G~S~GG~~a~~~~ 451 (571)
++... ++.++......... + .......+.++++ .++..+|++|++|+|+||||++++.++
T Consensus 80 ~~~~~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~ 159 (278)
T 2gzs_A 80 QTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSW 159 (278)
T ss_dssp SSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHH
T ss_pred CCCCcCcccccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHH
Confidence 75321 11122111100000 0 0001122233333 333447888999999999999999999
Q ss_pred hcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCC--------ChHH
Q 008274 452 ARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENV--------HFRH 523 (571)
Q Consensus 452 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v--------~~~~ 523 (571)
.+ |++|+++++.+|...|.... .. . .. +.+... ..-..|++|.+|+.|..+ +..+
T Consensus 160 ~~-p~~f~~~~~~s~~~~~~~~~-~~-~-~~-------~~~~~~------~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~ 222 (278)
T 2gzs_A 160 LS-SSYFRSYYSASPSLGRGYDA-LL-S-RV-------TAVEPL------QFCTKHLAIMEGSATQGDNRETHAVGVLSK 222 (278)
T ss_dssp HH-CSSCSEEEEESGGGSTTHHH-HH-H-HH-------HTSCTT------TTTTCEEEEEECCC-----------CHHHH
T ss_pred hC-ccccCeEEEeCcchhcCcch-HH-H-HH-------HHhhcc------CCCCCcEEEEecCccccccccchhhhhHHH
Confidence 99 99999999999876442100 00 0 00 000000 012358999999999864 4789
Q ss_pred HHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 524 TARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 524 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+.+++++|++.|+++++.++|+++|+... ...+ ...++||.+
T Consensus 223 ~~~~~~~L~~~g~~~~~~~~~g~~H~~~~---~~~~-~~~l~fl~~ 264 (278)
T 2gzs_A 223 IHTTLTILKDKGVNAVFWDFPNLGHGPMF---NASF-RQALLDISG 264 (278)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTCCHHHHH---HHHH-HHHHHHHTT
T ss_pred HHHHHHHHHcCCCeeEEEEcCCCCccchh---HHHH-HHHHHHHhh
Confidence 99999999999999999999999997532 2223 345567754
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.71 E-value=4.3e-17 Score=156.86 Aligned_cols=221 Identities=11% Similarity=0.035 Sum_probs=133.7
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchh-hhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDM-RAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~-~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
+|.++++..+.+.. ...|+||++||.+++.. ..|...|.. .+..|++ +|.|+++|+||+|.+......
T Consensus 19 ~~~~l~y~~~G~~~-----~~~p~vvllHG~~~~~~--~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~~--- 87 (286)
T 2qmq_A 19 PYGSVTFTVYGTPK-----PKRPAIFTYHDVGLNYK--SCFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFPL--- 87 (286)
T ss_dssp TTEEEEEEEESCCC-----TTCCEEEEECCTTCCHH--HHHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCCT---
T ss_pred CCeEEEEEeccCCC-----CCCCeEEEeCCCCCCch--hhhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCCCC---
Confidence 67788877765432 23588999999877643 012211221 4566665 699999999998754321110
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch----------
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF---------- 476 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---------- 476 (571)
.......+++.+.+..+++.- +.+++.|+|||+||.+++.++.++|++++++|+.+|..........
T Consensus 88 -~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
T 2qmq_A 88 -GYQYPSLDQLADMIPCILQYL--NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTS 164 (286)
T ss_dssp -TCCCCCHHHHHHTHHHHHHHH--TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHHHHHTTS
T ss_pred -CCCccCHHHHHHHHHHHHHHh--CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhhhccccc
Confidence 000012344444333333321 3458999999999999999999999999999998886532111000
Q ss_pred -----hhhhhcC------CCC------------CCh---hhhc-------cCC-cchhhccCCCcEEEEecCCCCCCChH
Q 008274 477 -----YTEKYMG------LPS------------EDP---VGYE-------YSS-VMHHVHKMKGKLLLVHGMIDENVHFR 522 (571)
Q Consensus 477 -----~~~~~~g------~~~------------~~~---~~~~-------~~s-~~~~~~~~~~p~lli~G~~D~~v~~~ 522 (571)
.....+. .+. ... ..+. ... ....+.++++|+|+++|++|..++ .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~ 243 (286)
T 2qmq_A 165 SIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-A 243 (286)
T ss_dssp CHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-H
T ss_pred cchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-H
Confidence 0000000 000 000 0000 000 123456788999999999999887 2
Q ss_pred HHHHHHHHHHHcCC-CeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 523 HTARLINALVAARK-PYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 523 ~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
. .+.+.+... ++++++++++||.+. .++...+.+.+.+||+
T Consensus 244 ~----~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 244 V----VECNSKLDPTQTSFLKMADSGGQPQ-LTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp H----HHHHHHSCGGGEEEEEETTCTTCHH-HHCHHHHHHHHHHHHC
T ss_pred H----HHHHHHhcCCCceEEEeCCCCCccc-ccChHHHHHHHHHHhc
Confidence 2 333444444 689999999999873 3557888999999985
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.71 E-value=9.5e-17 Score=152.59 Aligned_cols=195 Identities=12% Similarity=0.039 Sum_probs=124.3
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|.||++||.+++.. .|...+..|++.||.|+++|+||+|.+.... ...++++.+.+..+++.-
T Consensus 16 ~~~vvllHG~~~~~~-------~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~---------~~~~~~~a~~l~~~l~~l 79 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGA-------DWQPVLSHLARTQCAALTLDLPGHGTNPERH---------CDNFAEAVEMIEQTVQAH 79 (264)
T ss_dssp BCEEEEECCTTCCGG-------GGHHHHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTT
T ss_pred CCcEEEEcCCCCCHH-------HHHHHHHHhcccCceEEEecCCCCCCCCCCC---------ccCHHHHHHHHHHHHHHh
Confidence 478999999876643 3455678887689999999999999876311 012455666565555543
Q ss_pred CCcCCcEEEEeechHHHHHHH---HHhcCCCeeEEEEEcCccCCccccc---------chhh------------hhhcCC
Q 008274 429 LAKVGHIGLYGWSYGGYLSAI---TLARFPDVFQCAVSGAPVTSWDGYD---------TFYT------------EKYMGL 484 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~---~~~~~~~~~~~~v~~~~~~~~~~~~---------~~~~------------~~~~g~ 484 (571)
.++..++.|+||||||.+++. ++.++|++++++|+.++........ ..+. ..+...
T Consensus 80 ~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
T 1r3d_A 80 VTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQ 159 (264)
T ss_dssp CCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTS
T ss_pred CcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhhh
Confidence 233234999999999999999 8888999999999877643221000 0000 000000
Q ss_pred ---CCCCh---------------h----hhc------cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCC
Q 008274 485 ---PSEDP---------------V----GYE------YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARK 536 (571)
Q Consensus 485 ---~~~~~---------------~----~~~------~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~ 536 (571)
..... . .+. ..+....+.++++|+|+++|++|..++ .+.+.+ .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~---~- 230 (264)
T 1r3d_A 160 AVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESS---G- 230 (264)
T ss_dssp GGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHH---C-
T ss_pred hhhhccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHh---C-
Confidence 00000 0 000 012223456788999999999997531 233333 2
Q ss_pred CeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 537 PYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 537 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.++++++++||.+ ..++.+.+.+.+.+|++++
T Consensus 231 -~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 231 -LSYSQVAQAGHNV-HHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp -SEEEEETTCCSCH-HHHCHHHHHHHHHHHHHHH
T ss_pred -CcEEEcCCCCCch-hhcCHHHHHHHHHHHHHHh
Confidence 5788999999987 3466788999999999875
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.71 E-value=6.3e-17 Score=153.21 Aligned_cols=191 Identities=17% Similarity=0.177 Sum_probs=125.2
Q ss_pred EEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCC
Q 008274 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA 430 (571)
Q Consensus 351 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 430 (571)
.||++||.+.+.. . |...+..|+ .+|.|+++|+||+|.+... ... ++...++.+.+. +
T Consensus 15 ~vvllHG~~~~~~---~----w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~---------~~~---~~~~~~~~l~~~--l 72 (258)
T 1m33_A 15 HLVLLHGWGLNAE---V----WRCIDEELS-SHFTLHLVDLPGFGRSRGF---------GAL---SLADMAEAVLQQ--A 72 (258)
T ss_dssp EEEEECCTTCCGG---G----GGGTHHHHH-TTSEEEEECCTTSTTCCSC---------CCC---CHHHHHHHHHTT--S
T ss_pred eEEEECCCCCChH---H----HHHHHHHhh-cCcEEEEeeCCCCCCCCCC---------CCc---CHHHHHHHHHHH--h
Confidence 7889999766533 2 444566776 5899999999999877532 112 233344444443 2
Q ss_pred cCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc------ccccc----hh-----------hhhhc-----CC
Q 008274 431 KVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW------DGYDT----FY-----------TEKYM-----GL 484 (571)
Q Consensus 431 d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~------~~~~~----~~-----------~~~~~-----g~ 484 (571)
+ +++.|+||||||.+++.++.++|++++++|+.++...+ ..... .+ ..++. +.
T Consensus 73 ~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (258)
T 1m33_A 73 P-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGT 151 (258)
T ss_dssp C-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTS
T ss_pred C-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCC
Confidence 4 78999999999999999999999999999987654221 10000 00 00111 00
Q ss_pred C-----------------CCChhh-------hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeE
Q 008274 485 P-----------------SEDPVG-------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI 540 (571)
Q Consensus 485 ~-----------------~~~~~~-------~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 540 (571)
+ ...... +...+....+.++++|+|+++|++|..++...++.+.+. -.+.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~----~~~~~~ 227 (258)
T 1m33_A 152 ETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKL----WPHSES 227 (258)
T ss_dssp TTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTT----CTTCEE
T ss_pred ccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHh----CccceE
Confidence 0 000000 011122234667889999999999999998876655443 356799
Q ss_pred EEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 541 LIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 541 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++++++||.+ ..++.+.+.+.+.+||.+
T Consensus 228 ~~i~~~gH~~-~~e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 228 YIFAKAAHAP-FISHPAEFCHLLVALKQR 255 (258)
T ss_dssp EEETTCCSCH-HHHSHHHHHHHHHHHHTT
T ss_pred EEeCCCCCCc-cccCHHHHHHHHHHHHHh
Confidence 9999999987 335678899999999865
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.70 E-value=5e-17 Score=157.43 Aligned_cols=214 Identities=10% Similarity=0.002 Sum_probs=139.4
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.+|..+.+..+.+ .|+||++||.+++.. .| ..++..|++. |.|+++|+||+|.+.....
T Consensus 16 ~~g~~l~~~~~g~---------~~~vv~lHG~~~~~~---~~----~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~---- 74 (302)
T 1mj5_A 16 IKGRRMAYIDEGT---------GDPILFQHGNPTSSY---LW----RNIMPHCAGL-GRLIACDLIGMGDSDKLDP---- 74 (302)
T ss_dssp ETTEEEEEEEESC---------SSEEEEECCTTCCGG---GG----TTTGGGGTTS-SEEEEECCTTSTTSCCCSS----
T ss_pred ECCEEEEEEEcCC---------CCEEEEECCCCCchh---hh----HHHHHHhccC-CeEEEEcCCCCCCCCCCCC----
Confidence 4777787765532 378999999877643 33 3345666654 8999999999987753210
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcC-CcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC---cccccc-------
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKV-GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS---WDGYDT------- 475 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------- 475 (571)
........++..+.+..+++.- +. +++.++|||+||.+++.++.++|++++++|+.+|... +.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 152 (302)
T 1mj5_A 75 SGPERYAYAEHRDYLDALWEAL--DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQ 152 (302)
T ss_dssp CSTTSSCHHHHHHHHHHHHHHT--TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHH
T ss_pred CCcccccHHHHHHHHHHHHHHh--CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHH
Confidence 0111134556665555555542 34 7899999999999999999999999999999887653 111000
Q ss_pred ---------------hhhhhhcC--C-CCCChh---h------------------hccC--------------Ccchhhc
Q 008274 476 ---------------FYTEKYMG--L-PSEDPV---G------------------YEYS--------------SVMHHVH 502 (571)
Q Consensus 476 ---------------~~~~~~~g--~-~~~~~~---~------------------~~~~--------------s~~~~~~ 502 (571)
.+...++. . .....+ . +... +....+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (302)
T 1mj5_A 153 AFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLS 232 (302)
T ss_dssp HHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHT
T ss_pred HHhccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhh
Confidence 00000000 0 000000 0 0000 1123456
Q ss_pred cCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 503 KMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 503 ~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++++|+|+++|++|..++++....+.+.+ .+ +++++ ++||.+ ..++.+.+.+.+.+||.+.
T Consensus 233 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~-~~~~~-~~gH~~-~~e~p~~~~~~i~~fl~~~ 293 (302)
T 1mj5_A 233 ESPIPKLFINAEPGALTTGRMRDFCRTWP----NQ-TEITV-AGAHFI-QEDSPDEIGAAIAAFVRRL 293 (302)
T ss_dssp TCCSCEEEEEEEECSSSSHHHHHHHTTCS----SE-EEEEE-EESSCG-GGTCHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEEEeCCCCCCChHHHHHHHHhc----CC-ceEEe-cCcCcc-cccCHHHHHHHHHHHHHhh
Confidence 78899999999999999998777665543 34 88889 999987 4467889999999999864
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-17 Score=158.90 Aligned_cols=200 Identities=13% Similarity=0.049 Sum_probs=127.3
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
.+.|+||++||.+++.. .|..++..|++ +|.|+++|+||+|.+... .....+.+..+.+..+++
T Consensus 18 ~~~~~vv~~HG~~~~~~-------~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~l~ 81 (267)
T 3fla_A 18 DARARLVCLPHAGGSAS-------FFFPLAKALAP-AVEVLAVQYPGRQDRRHE--------PPVDSIGGLTNRLLEVLR 81 (267)
T ss_dssp TCSEEEEEECCTTCCGG-------GGHHHHHHHTT-TEEEEEECCTTSGGGTTS--------CCCCSHHHHHHHHHHHTG
T ss_pred CCCceEEEeCCCCCCch-------hHHHHHHHhcc-CcEEEEecCCCCCCCCCC--------CCCcCHHHHHHHHHHHHH
Confidence 45689999999876532 34556677765 499999999998865421 112234455444444444
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCe----eEEEEEcCccCCcccc--------cchhhhhhc---CCCC---CC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDV----FQCAVSGAPVTSWDGY--------DTFYTEKYM---GLPS---ED 488 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~----~~~~v~~~~~~~~~~~--------~~~~~~~~~---g~~~---~~ 488 (571)
.- +..++.|+|||+||.+++.++.++|++ ++++++.++....... ...+...+. +.+. .+
T Consensus 82 ~~--~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
T 3fla_A 82 PF--GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLAD 159 (267)
T ss_dssp GG--TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHS
T ss_pred hc--CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccC
Confidence 32 457899999999999999999999985 7888877655321110 000000000 0000 00
Q ss_pred h--------------hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCC
Q 008274 489 P--------------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHR 554 (571)
Q Consensus 489 ~--------------~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 554 (571)
. .......... ..++++|+|+++|++|..++++....+.+.+ ..+++++++++ ||.+. .+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~-~~ 233 (267)
T 3fla_A 160 PELLAMVLPAIRSDYRAVETYRHEP-GRRVDCPVTVFTGDHDPRVSVGEARAWEEHT---TGPADLRVLPG-GHFFL-VD 233 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCT-TCCBSSCEEEEEETTCTTCCHHHHHGGGGGB---SSCEEEEEESS-STTHH-HH
T ss_pred HHHHHHHHHHHHHHHHhhhcccccc-cCcCCCCEEEEecCCCCCCCHHHHHHHHHhc---CCCceEEEecC-Cceee-cc
Confidence 0 0001111111 1567899999999999999998877776554 33589999998 99863 35
Q ss_pred cHHHHHHHHHHHHHHh
Q 008274 555 DRIYMEERIWEFIERT 570 (571)
Q Consensus 555 ~~~~~~~~i~~fl~~~ 570 (571)
+...+.+.+.+||++.
T Consensus 234 ~~~~~~~~i~~fl~~~ 249 (267)
T 3fla_A 234 QAAPMIATMTEKLAGP 249 (267)
T ss_dssp THHHHHHHHHHHTC--
T ss_pred CHHHHHHHHHHHhccc
Confidence 6788889999998653
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.5e-16 Score=139.46 Aligned_cols=170 Identities=14% Similarity=0.072 Sum_probs=117.3
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
+.|.||++||.+++.. ..| ......+...+ +.+|.+|.+. ....+..+.+..+.+.
T Consensus 16 ~~~~vv~~HG~~~~~~--~~~----~~~~~~~~~~~---~~v~~~~~~~---------------~~~~~~~~~~~~~~~~ 71 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDD--EHW----QSHWERRFPHW---QRIRQREWYQ---------------ADLDRWVLAIRRELSV 71 (191)
T ss_dssp TTCEEEEECCTTCCCT--TSH----HHHHHHHCTTS---EECCCSCCSS---------------CCHHHHHHHHHHHHHT
T ss_pred CCceEEEECCCCCCch--hhH----HHHHHHhcCCe---EEEeccCCCC---------------cCHHHHHHHHHHHHHh
Confidence 3478999999876532 122 22222222333 4567776432 1244555555555554
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCc
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGK 507 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p 507 (571)
. + ++++++|||+||.+++.++.++|++++++++.+|...... . .+. ...+.++++|
T Consensus 72 ~--~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~---~-------~~~-----------~~~~~~~~~P 127 (191)
T 3bdv_A 72 C--T-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF---E-------IDD-----------RIQASPLSVP 127 (191)
T ss_dssp C--S-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG---T-------CTT-----------TSCSSCCSSC
T ss_pred c--C-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccc---c-------Ccc-----------ccccccCCCC
Confidence 2 3 7899999999999999999999999999999998754311 0 000 0235677899
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCC--CcHHHHHHHHHHHHHHh
Q 008274 508 LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRH--RDRIYMEERIWEFIERT 570 (571)
Q Consensus 508 ~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~fl~~~ 570 (571)
+|+++|++|..+|++.++.+.+.+ +.++++++++||.+... ....+..+.+.+||++.
T Consensus 128 ~lii~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 187 (191)
T 3bdv_A 128 TLTFASHNDPLMSFTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEIL 187 (191)
T ss_dssp EEEEECSSBTTBCHHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTT
T ss_pred EEEEecCCCCcCCHHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHh
Confidence 999999999999999998888875 47899999999987332 13344558899998763
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.68 E-value=6.3e-16 Score=152.06 Aligned_cols=208 Identities=14% Similarity=0.103 Sum_probs=129.7
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEEC----CCCCCCChhhhHHHH
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLD----NRGTARRGLKFEASI 405 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d----~rG~~~~~~~~~~~~ 405 (571)
..+.+..+.|.+ +..|+||++||.+.+.. .| ..+..++..| +.||.|+++| +||+|.+....
T Consensus 24 ~~~~y~~~g~~~-----~~~~~vvllHG~~~~~~---~~-~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~~~---- 89 (335)
T 2q0x_A 24 PYCKIPVFMMNM-----DARRCVLWVGGQTESLL---SF-DYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDHAH---- 89 (335)
T ss_dssp TTEEEEEEEECT-----TSSSEEEEECCTTCCTT---CS-TTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCCHHH----
T ss_pred CceeEEEeccCC-----CCCcEEEEECCCCcccc---ch-hHHHHHHHHH-HCCcEEEEEeccCCCCCCCCccccC----
Confidence 446555565322 23478889999654322 22 1234456666 7899999995 58888765311
Q ss_pred hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHh--cCCCeeEEEEEcCccCCccc--ccc-----h
Q 008274 406 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLA--RFPDVFQCAVSGAPVTSWDG--YDT-----F 476 (571)
Q Consensus 406 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~--~~~~~~~~~v~~~~~~~~~~--~~~-----~ 476 (571)
...|+.+.++++.+. .+..++.|+||||||.+++.++. .+|++++++|+.+|...... ... .
T Consensus 90 -------~~~d~~~~~~~l~~~--l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~ 160 (335)
T 2q0x_A 90 -------DAEDVDDLIGILLRD--HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAAR 160 (335)
T ss_dssp -------HHHHHHHHHHHHHHH--SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHH
T ss_pred -------cHHHHHHHHHHHHHH--cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHH
Confidence 156778888888764 25578999999999999999998 57999999999887643210 000 0
Q ss_pred --hhhhh---------------cCCCCCChhhhcc-------------------CCcchhhccCCCcEEEEecCCCCCCC
Q 008274 477 --YTEKY---------------MGLPSEDPVGYEY-------------------SSVMHHVHKMKGKLLLVHGMIDENVH 520 (571)
Q Consensus 477 --~~~~~---------------~g~~~~~~~~~~~-------------------~s~~~~~~~~~~p~lli~G~~D~~v~ 520 (571)
..... ...+. ....+.. .+....+.++++|+|+++|++|..+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp 239 (335)
T 2q0x_A 161 KEHVEKLMAEGRGEDSLAMLKHYDIPI-TPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKP 239 (335)
T ss_dssp HHHHHHHHHHTCTTCGGGGTTTCSSCC-CHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCC
T ss_pred HHHHHHHhhccCccccccchhhccCcc-CHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCC
Confidence 00000 00000 0001100 01123467789999999999999999
Q ss_pred hHH-HHHHHHHHHHcCCCee--------E-----EEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 521 FRH-TARLINALVAARKPYE--------I-----LIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 521 ~~~-~~~~~~~l~~~~~~~~--------~-----~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+.. ...+.+.+.+.-...+ + +++|++|| +..+.+.+||++.
T Consensus 240 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~ 294 (335)
T 2q0x_A 240 SDEEVGTVLEGVRDHTGCNRVTVSYFNDTCDELRRVLKAAES---------EHVAAILQFLADE 294 (335)
T ss_dssp CHHHHHHHHHHHHHHSSSSCEEEEECCCEECTTSCEEECCHH---------HHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHhcCccccccccccchhhhhhcccCCCCC---------HHHHHHHHHHHhh
Confidence 864 2333444444333344 5 78999999 2378889998753
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-15 Score=153.49 Aligned_cols=192 Identities=10% Similarity=0.064 Sum_probs=129.2
Q ss_pred ceEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEcc-CCeEEEEEEeccC--ccEEEEEEECCCCceEEEEEeec
Q 008274 78 VKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQ--TKLKVLKFDIKTGQRKVILVEEL 154 (571)
Q Consensus 78 ~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~i~~~~~r~~--~~~~i~~~d~~~g~~~~l~~~~~ 154 (571)
....|+++|+++++.+.+.. ....+..+.||| ||+.|++...... ....|+.+|+++++.+.|+....
T Consensus 166 ~~~~l~~~d~~~g~~~~l~~---------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~ 236 (388)
T 3pe7_A 166 PCCRLMRVDLKTGESTVILQ---------ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAE 236 (388)
T ss_dssp CCEEEEEEETTTCCEEEEEE---------ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCT
T ss_pred CcceEEEEECCCCceEEeec---------CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCC
Confidence 34789999999999887754 244567899999 9999998876432 24479999999998887765332
Q ss_pred CCeeeccCCcccCCCCCccCCCe--EEEEEecCCccE--EEEEeCCCceeeceeecCeEEEE-----EEEEeecCcEEEE
Q 008274 155 DSWVNLHDCFTPLDKGVTKYSGG--FIWASEKTGFRH--LYLHDINGTCLGPITEGDWMVEQ-----IVGVNEASGQVYF 225 (571)
Q Consensus 155 ~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~--l~~~~~~~~~~~~lT~~~~~~~~-----~~~~s~dg~~l~~ 225 (571)
..+.. .+ .|++|+ +++.+.+.+..+ ||++++++++.++|+........ ...|+|||+.|+|
T Consensus 237 ~~~~~-~~---------~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~ 306 (388)
T 3pe7_A 237 GESCT-HE---------FWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPV 306 (388)
T ss_dssp TEEEE-EE---------EECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC--
T ss_pred Ccccc-cc---------eECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCccee
Confidence 21211 11 244554 778888777654 99999999988888764432111 1149999999999
Q ss_pred EEcCC----CCceeEEEEEEeCCCCCCCCCCCeEecCCCc------------eEEEEECCCCCEEEEEeeCCCCCCEEEE
Q 008274 226 TGTLD----GPLESHLYCAKLYPDWNHTLEAPVKLTNGKG------------KHVAVLDHNMRNFVDFHDSLDSPPRILL 289 (571)
Q Consensus 226 ~~~~~----~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g------------~~~~~~s~~g~~~v~~~s~~~~p~~l~~ 289 (571)
..... ......||.+++ .+. ..++|+...+ ...+.|||||++++|.... ...+.||+
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~--~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-~g~~~l~~ 379 (388)
T 3pe7_A 307 DVQDDSGYKIENDPFLYVFNM--KNG----TQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV-HGKPALYL 379 (388)
T ss_dssp ----------CCCCEEEEEET--TTT----EEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEE
T ss_pred EeeeccccccCCCCEEEEEec--cCC----ceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecC-CCceeEEE
Confidence 87541 122478999998 443 5567765443 3456899999999987654 55679999
Q ss_pred EEcCCC
Q 008274 290 CSLQDG 295 (571)
Q Consensus 290 ~~~~~~ 295 (571)
+++.+.
T Consensus 380 ~~l~~~ 385 (388)
T 3pe7_A 380 ATLPES 385 (388)
T ss_dssp EECCGG
T ss_pred EECChh
Confidence 998543
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.66 E-value=4e-16 Score=151.85 Aligned_cols=206 Identities=12% Similarity=0.057 Sum_probs=132.4
Q ss_pred CCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh------CCcEEEEE
Q 008274 317 EPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS------KGILVWKL 389 (571)
Q Consensus 317 ~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~------~G~~v~~~ 389 (571)
.+.+.+++.+. -|.....++|.|+++....+++|||+++||... |. ......+.+.. .+++||.+
T Consensus 10 ~~v~~~~~~S~~l~~~r~~~VylP~~y~~~~~~yPVlylldG~~~-------f~-~~~~~~~~l~~~~~~~~~~~IvV~i 81 (331)
T 3gff_A 10 VEYQSKRLESRLLKETREYVIALPEGYAQSLEAYPVVYLLDGEDQ-------FD-HMASLLQFLSQGTMPQIPKVIIVGI 81 (331)
T ss_dssp -CEEEEEEEETTTTEEEEEEEECCTTGGGSCCCEEEEEESSHHHH-------HH-HHHHHHHHHTCSSSCSSCCCEEEEE
T ss_pred ceEEEEEEEecCCCCeEEEEEEeCCCCCCCCCCccEEEEecChhh-------hH-HHHHHHHHHHhhhhcCCCCEEEEEE
Confidence 45677777775 478899999999987433578999999999421 11 11122444543 36899998
Q ss_pred CCCCCCCChhhhHHHH-------------hccCCC-CCchhH--HHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 390 DNRGTARRGLKFEASI-------------KHNCGR-IDAEDQ--LTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 390 d~rG~~~~~~~~~~~~-------------~~~~~~-~~~~D~--~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
+.. .+..++.... ....+. ....+. .+.+.++.++..++..| +|+||||||++++.++.+
T Consensus 82 ~~~---~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~ 157 (331)
T 3gff_A 82 HNT---NRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRT 157 (331)
T ss_dssp CCS---SHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHT
T ss_pred CCC---CcccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHh
Confidence 762 1111111000 000000 011121 13445555555556555 799999999999999999
Q ss_pred CCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCC-cchhhccCCCcEEEEecCCCC-------CCChHHHH
Q 008274 454 FPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSS-VMHHVHKMKGKLLLVHGMIDE-------NVHFRHTA 525 (571)
Q Consensus 454 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s-~~~~~~~~~~p~lli~G~~D~-------~v~~~~~~ 525 (571)
+|++|+++++.+|...|... ....... .+........|+++.||+.|. .++...+.
T Consensus 158 ~p~~F~~~~~~S~~~w~~~~----------------~~~~~~~~~~~~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~ 221 (331)
T 3gff_A 158 DRPLFSAYLALDTSLWFDSP----------------HYLTLLEERVVKGDFKQKQLFMAIANNPLSPGFGVSSYHKDLNL 221 (331)
T ss_dssp TCSSCSEEEEESCCTTTTTT----------------HHHHHHHHHHHHCCCSSEEEEEEECCCSEETTTEECCHHHHHHH
T ss_pred CchhhheeeEeCchhcCChH----------------HHHHHHHHHhhcccCCCCeEEEEeCCCCCCCccchHHHHHHHHH
Confidence 99999999999997643211 0000000 011111234799999999998 57778889
Q ss_pred HHHHHHHHc---CCCeeEEEcCCCCCCC
Q 008274 526 RLINALVAA---RKPYEILIFPDERHMP 550 (571)
Q Consensus 526 ~~~~~l~~~---~~~~~~~~~~~~~H~~ 550 (571)
+++++|++. |.++++.+||+++|+.
T Consensus 222 ~l~~~Lk~~~~~g~~~~~~~~pg~~H~s 249 (331)
T 3gff_A 222 AFADKLTKLAPKGLGFMAKYYPEETHQS 249 (331)
T ss_dssp HHHHHHHHHCCTTEEEEEEECTTCCTTT
T ss_pred HHHHHHHhccCCCceEEEEECCCCCccc
Confidence 999999987 6789999999999985
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.1e-16 Score=150.01 Aligned_cols=216 Identities=11% Similarity=-0.010 Sum_probs=128.7
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.+|..+++....+ + ...|.||++||.+.+.. .|...+..|+ .+|.|+++|+||+|.+....
T Consensus 11 ~~g~~l~y~~~~~-G-----~~~p~vvllHG~~~~~~-------~w~~~~~~L~-~~~rvia~DlrGhG~S~~~~----- 71 (276)
T 2wj6_A 11 VFDNKLSYIDNQR-D-----TDGPAILLLPGWCHDHR-------VYKYLIQELD-ADFRVIVPNWRGHGLSPSEV----- 71 (276)
T ss_dssp ETTEEEEEEECCC-C-----CSSCEEEEECCTTCCGG-------GGHHHHHHHT-TTSCEEEECCTTCSSSCCCC-----
T ss_pred eCCeEEEEEEecC-C-----CCCCeEEEECCCCCcHH-------HHHHHHHHHh-cCCEEEEeCCCCCCCCCCCC-----
Confidence 3677777654411 1 12367889999776543 3455566776 47999999999999875320
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-CCeeEEEEEcCccCCccc--c----------
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-PDVFQCAVSGAPVTSWDG--Y---------- 473 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-~~~~~~~v~~~~~~~~~~--~---------- 473 (571)
....++++.+.+..+.+.- +.+++.|+||||||.+++.++.++ |++++++|+.++...... +
T Consensus 72 ---~~~~~~~~a~dl~~ll~~l--~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~ 146 (276)
T 2wj6_A 72 ---PDFGYQEQVKDALEILDQL--GVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDP 146 (276)
T ss_dssp ---CCCCHHHHHHHHHHHHHHH--TCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCT
T ss_pred ---CCCCHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCc
Confidence 1122444443333333321 446899999999999999999999 999999988865321000 0
Q ss_pred cc------hhhhhhcCCCC--------------CChhhhc------------cCCcchhhccCCCcEEEEecCCCCCCCh
Q 008274 474 DT------FYTEKYMGLPS--------------EDPVGYE------------YSSVMHHVHKMKGKLLLVHGMIDENVHF 521 (571)
Q Consensus 474 ~~------~~~~~~~g~~~--------------~~~~~~~------------~~s~~~~~~~~~~p~lli~G~~D~~v~~ 521 (571)
.. .....+..... ...+.+. ..++...+.++++|+|+++|..|...+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~ 226 (276)
T 2wj6_A 147 ERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPE 226 (276)
T ss_dssp TTHHHHHHHHHHHHHTTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHH
T ss_pred chHHHHHHHHHHHhhcccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchh
Confidence 00 00000000000 0000000 0112234567888999988754433221
Q ss_pred HHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 522 RHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
. ....+.+.+.-.+.+++++|++||.. ..++.+.+.+.+.+||++
T Consensus 227 ~--~~~~~~~~~~~p~a~~~~i~~~gH~~-~~e~P~~~~~~i~~Fl~~ 271 (276)
T 2wj6_A 227 Y--EKINSDFAEQHPWFSYAKLGGPTHFP-AIDVPDRAAVHIREFATA 271 (276)
T ss_dssp H--HHHHHHHHHHCTTEEEEECCCSSSCH-HHHSHHHHHHHHHHHHHH
T ss_pred H--HHHHHHHHhhCCCeEEEEeCCCCCcc-cccCHHHHHHHHHHHHhh
Confidence 1 11122333334678999999999986 446788899999999975
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.47 E-value=7.7e-18 Score=163.12 Aligned_cols=202 Identities=16% Similarity=0.051 Sum_probs=122.9
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH-HhccCCCCCchhHHHHHHHHHHc
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS-IKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
.|.||++||.+++.. . |...+..|+ +||.|+++|+||+|.+....... .....-....+|+.++++.+
T Consensus 25 ~p~vv~lHG~~~~~~---~----~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~l--- 93 (304)
T 3b12_A 25 GPALLLLHGFPQNLH---M----WARVAPLLA-NEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQRELMRTL--- 93 (304)
Confidence 377999999876543 2 344566776 79999999999998775431100 00000011234444444444
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-------------------------------ch
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD-------------------------------TF 476 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-------------------------------~~ 476 (571)
+.+++.|+|||+||.+++.++.++|++++++|+.+|........ ..
T Consensus 94 ---~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3b12_A 94 ---GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDT 170 (304)
Confidence 34589999999999999999999999999999988754321100 00
Q ss_pred hhhh-hc----CCC----CCChhhh-----------------ccC---C----cchhhccCCCcEEEEecCCCCCC-ChH
Q 008274 477 YTEK-YM----GLP----SEDPVGY-----------------EYS---S----VMHHVHKMKGKLLLVHGMIDENV-HFR 522 (571)
Q Consensus 477 ~~~~-~~----g~~----~~~~~~~-----------------~~~---s----~~~~~~~~~~p~lli~G~~D~~v-~~~ 522 (571)
+... ++ +.+ .+..+.+ ... + ....+.++++|+|+++|++|..+ +..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~ 250 (304)
T 3b12_A 171 FYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFE 250 (304)
Confidence 0000 00 000 0000000 000 0 00015678899999999999655 444
Q ss_pred HHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 523 HTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 523 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
....+.+.+ .++++.++ ++||.+ ..++...+.+.|.+||+++
T Consensus 251 ~~~~~~~~~----~~~~~~~i-~~gH~~-~~e~p~~~~~~i~~fl~~~ 292 (304)
T 3b12_A 251 MQVVWAPRL----ANMRFASL-PGGHFF-VDRFPDDTARILREFLSDA 292 (304)
Confidence 444443332 34677788 999987 3466778889999999764
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-15 Score=148.69 Aligned_cols=211 Identities=14% Similarity=0.106 Sum_probs=131.5
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|..+++....+ ++.|.||++||.+++.. .| ...+..|++. |.|+++|+||+|.+...
T Consensus 29 ~g~~l~y~~~G~-------g~~~~vvllHG~~~~~~---~w----~~~~~~L~~~-~~via~Dl~GhG~S~~~------- 86 (318)
T 2psd_A 29 LDSFINYYDSEK-------HAENAVIFLHGNATSSY---LW----RHVVPHIEPV-ARCIIPDLIGMGKSGKS------- 86 (318)
T ss_dssp TTEEEEEEECCS-------CTTSEEEEECCTTCCGG---GG----TTTGGGTTTT-SEEEEECCTTSTTCCCC-------
T ss_pred CCeEEEEEEcCC-------CCCCeEEEECCCCCcHH---HH----HHHHHHhhhc-CeEEEEeCCCCCCCCCC-------
Confidence 677776654321 23367899999876543 33 3345666554 79999999999987532
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcC-CcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC----Cccccc---ch---
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKV-GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT----SWDGYD---TF--- 476 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~----~~~~~~---~~--- 476 (571)
..+...+++..+.+..+++.- +. +++.|+||||||.+++.++.++|++++++|+.+++. .+.... ..
T Consensus 87 ~~~~~~~~~~a~dl~~ll~~l--~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 164 (318)
T 2psd_A 87 GNGSYRLLDHYKYLTAWFELL--NLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIAL 164 (318)
T ss_dssp TTSCCSHHHHHHHHHHHHTTS--CCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHHhc--CCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHH
Confidence 011234566666666666543 33 689999999999999999999999999998865321 111000 00
Q ss_pred ---------------hhhhhc--CC-CCCCh---hhh-----------------ccC------Cc----------chhhc
Q 008274 477 ---------------YTEKYM--GL-PSEDP---VGY-----------------EYS------SV----------MHHVH 502 (571)
Q Consensus 477 ---------------~~~~~~--g~-~~~~~---~~~-----------------~~~------s~----------~~~~~ 502 (571)
+.+..+ .. ..... +.| ... .+ ...+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (318)
T 2psd_A 165 IKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLR 244 (318)
T ss_dssp HHSTHHHHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHH
T ss_pred HhcccchhhhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhc
Confidence 000000 00 00000 000 000 00 01244
Q ss_pred cC-CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 503 KM-KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 503 ~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++ ++|+|+++|++| .+++ .+..+.+.+ .+.+++++ ++||.+ ..+....+.+.|.+||.+.
T Consensus 245 ~i~~~P~Lvi~G~~D-~~~~-~~~~~~~~~----~~~~~~~i-~~gH~~-~~e~p~~~~~~i~~fl~~~ 305 (318)
T 2psd_A 245 ASDDLPKLFIESDPG-FFSN-AIVEGAKKF----PNTEFVKV-KGLHFL-QEDAPDEMGKYIKSFVERV 305 (318)
T ss_dssp TCTTSCEEEEEEEEC-SSHH-HHHHHHTTS----SSEEEEEE-EESSSG-GGTCHHHHHHHHHHHHHHH
T ss_pred cccCCCeEEEEeccc-cCcH-HHHHHHHhC----CCcEEEEe-cCCCCC-HhhCHHHHHHHHHHHHHHh
Confidence 57 899999999999 8876 555554433 45678788 679976 4567889999999999764
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.4e-15 Score=147.88 Aligned_cols=238 Identities=16% Similarity=0.137 Sum_probs=145.2
Q ss_pred CCeEEEEEcC--CCcE--EEEEEEcCCCCCCCCCCceEEEEEcCCCCceee-ccccc----c--------cch-hhhHHH
Q 008274 318 PPDIVQIQAN--DGTV--LYGALYKPDESRYGPPPYKTLISVYGGPCVQLV-CDSWI----N--------TVD-MRAQYL 379 (571)
Q Consensus 318 ~~~~~~~~~~--dg~~--l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~----~--------~~~-~~~~~l 379 (571)
...++.+.+. +|.. ..+.++.|.+.. .+.|+|.+-||..+.... .-++. . .++ ..+..+
T Consensus 74 ~a~ri~Y~std~~G~p~~~~gtv~~P~~~~---~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~ 150 (462)
T 3guu_A 74 ASFQLQYRTTNTQNEAVADVATVWIPAKPA---SPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGW 150 (462)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECSSCC---SSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHH
T ss_pred eEEEEEEEEECCCCCEEEEEEEEEecCCCC---CCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHH
Confidence 4455666554 4544 888999998742 347999999995542110 00000 0 111 234566
Q ss_pred -HhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCC-cCCcEEEEeechHHHHHHHHHhcC---
Q 008274 380 -RSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA-KVGHIGLYGWSYGGYLSAITLARF--- 454 (571)
Q Consensus 380 -~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~-d~~~i~l~G~S~GG~~a~~~~~~~--- 454 (571)
.++||+|+++||+|.|.. +...... ..++.+.++++.....+ ...+++++|||+||..+++++...
T Consensus 151 ~l~~G~~Vv~~Dy~G~G~~---y~~~~~~------~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~y 221 (462)
T 3guu_A 151 ALQQGYYVVSSDHEGFKAA---FIAGYEE------GMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESY 221 (462)
T ss_dssp HHHTTCEEEEECTTTTTTC---TTCHHHH------HHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHH
T ss_pred HHhCCCEEEEecCCCCCCc---ccCCcch------hHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhh
Confidence 899999999999998752 2111100 12233444443332223 347999999999999999887653
Q ss_pred -CC-eeEEEEEcCccCCcccc--------------------cchhh------hhhc-----------C------------
Q 008274 455 -PD-VFQCAVSGAPVTSWDGY--------------------DTFYT------EKYM-----------G------------ 483 (571)
Q Consensus 455 -~~-~~~~~v~~~~~~~~~~~--------------------~~~~~------~~~~-----------g------------ 483 (571)
|+ .+.++++.++..++... ...|. +.++ .
T Consensus 222 apel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~ 301 (462)
T 3guu_A 222 APELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLT 301 (462)
T ss_dssp CTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHH
T ss_pred cCccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHh
Confidence 33 57888888887763210 00000 0000 0
Q ss_pred CCCCChhhhcc-CCcch--------------------hhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEE
Q 008274 484 LPSEDPVGYEY-SSVMH--------------------HVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILI 542 (571)
Q Consensus 484 ~~~~~~~~~~~-~s~~~--------------------~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 542 (571)
....+...+.. .+++. ...+.+.|+||+||++|.+||++++.++++++++.|.++++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~ 381 (462)
T 3guu_A 302 YPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSP 381 (462)
T ss_dssp CTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hccCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 00011111111 11110 0123457999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 543 FPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 543 ~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
|++++|.... ......+++||++++
T Consensus 382 y~~~~H~~~~----~~~~~d~l~WL~~r~ 406 (462)
T 3guu_A 382 YPIAEHLTAE----IFGLVPSLWFIKQAF 406 (462)
T ss_dssp ESSCCHHHHH----HHTHHHHHHHHHHHH
T ss_pred ECcCCccCch----hhhHHHHHHHHHHHh
Confidence 9999998632 223677889988753
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.6e-17 Score=157.93 Aligned_cols=196 Identities=11% Similarity=-0.038 Sum_probs=115.9
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|.||++||.+++.. .|..++..|++ ||.|+++|+||+|.+.... ....+.++.+.+..+++.-
T Consensus 51 ~~~lvllHG~~~~~~-------~~~~l~~~L~~-~~~v~~~D~~G~G~S~~~~--------~~~~~~~~a~~~~~~l~~~ 114 (280)
T 3qmv_A 51 PLRLVCFPYAGGTVS-------AFRGWQERLGD-EVAVVPVQLPGRGLRLRER--------PYDTMEPLAEAVADALEEH 114 (280)
T ss_dssp SEEEEEECCTTCCGG-------GGTTHHHHHCT-TEEEEECCCTTSGGGTTSC--------CCCSHHHHHHHHHHHHHHT
T ss_pred CceEEEECCCCCChH-------HHHHHHHhcCC-CceEEEEeCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHh
Confidence 378999999876643 34556777877 9999999999998764221 1122444444433333321
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcCCCeeE----EEEEcCccCCcc-c---c----cchhh---hhhcCCCCC---Chh
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARFPDVFQ----CAVSGAPVTSWD-G---Y----DTFYT---EKYMGLPSE---DPV 490 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~----~~v~~~~~~~~~-~---~----~~~~~---~~~~g~~~~---~~~ 490 (571)
. ...++.|+||||||.+++.++.++|+++. .++..+...... . . ...+. ..+.+.+.. +.+
T Consensus 115 ~-~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (280)
T 3qmv_A 115 R-LTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAA 193 (280)
T ss_dssp T-CSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC--------
T ss_pred C-CCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHH
Confidence 1 34689999999999999999998876655 455443222110 0 0 00000 011111111 000
Q ss_pred h--------------hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCC-CCc
Q 008274 491 G--------------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR-HRD 555 (571)
Q Consensus 491 ~--------------~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~-~~~ 555 (571)
. ..... ...+.++++|+|+++|++|..++.+....+.+.+ ....+++++++ ||.+.. .++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~~~ 268 (280)
T 3qmv_A 194 YFDRRLPVLRADLRACERYD-WHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYT---TGSFLRRHLPG-NHFFLNGGPS 268 (280)
T ss_dssp -CCTTHHHHHHHHHHHHTCC-CCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGB---SSCEEEEEEEE-ETTGGGSSHH
T ss_pred HHHHHHHHHHHHHHHHHhcc-ccCCCceecCeEEEEecCCCCcChHHHHHHHHhc---CCceEEEEecC-CCeEEcCchh
Confidence 0 00001 1113577899999999999999988777665543 34577888885 897633 345
Q ss_pred HHHHHHHHHHH
Q 008274 556 RIYMEERIWEF 566 (571)
Q Consensus 556 ~~~~~~~i~~f 566 (571)
...+.+.|.+|
T Consensus 269 ~~~~~~~i~~~ 279 (280)
T 3qmv_A 269 RDRLLAHLGTE 279 (280)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhh
Confidence 55566655554
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.3e-14 Score=142.98 Aligned_cols=209 Identities=10% Similarity=-0.014 Sum_probs=141.8
Q ss_pred EEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCCC
Q 008274 28 YWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYD 107 (571)
Q Consensus 28 ~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~ 107 (571)
+.|||||++|+|.+..++. .+|+++|+++++.++++.. .
T Consensus 41 ~~~SpDg~~l~~~~~~~g~---------------------------------~~l~~~d~~~g~~~~lt~~--------~ 79 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGP---------------------------------WNYYLLDLNTQVATQLTEG--------R 79 (388)
T ss_dssp CCBCTTSCEEEEEECTTSS---------------------------------CEEEEEETTTCEEEECCCS--------S
T ss_pred ccCCCCCCEEEEEEcCCCC---------------------------------ceEEEEeCCCCceEEeeeC--------C
Confidence 7899999999997643221 2689999999998877432 1
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEe--
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASE-- 183 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~-- 183 (571)
......+.|||||+.|++..... .|+++|+++|+.+.+..... .|.... .+. .++|+ ++....
T Consensus 80 ~~~~~~~~~spdg~~l~~~~~~~----~l~~~d~~~g~~~~~~~~~~-~~~~~~-~~~-------~~~dg~~l~~~~~~~ 146 (388)
T 3pe7_A 80 GDNTFGGFLSPDDDALFYVKDGR----NLMRVDLATLEENVVYQVPA-EWVGYG-TWV-------ANSDCTKLVGIEIRR 146 (388)
T ss_dssp CBCSSSCEECTTSSEEEEEETTT----EEEEEETTTCCEEEEEECCT-TEEEEE-EEE-------ECTTSSEEEEEEEEG
T ss_pred CCCccceEEcCCCCEEEEEeCCC----eEEEEECCCCcceeeeechh-hccccc-cee-------ECCCCCeeccccccC
Confidence 12222468999999999887542 59999999999888876433 232110 000 12333 322211
Q ss_pred -----------------cCCccEEEEEeCCCceeeceeecCeEEEEEEEEee-cCcEEEEEEcCCC-CceeEEEEEEeCC
Q 008274 184 -----------------KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNE-ASGQVYFTGTLDG-PLESHLYCAKLYP 244 (571)
Q Consensus 184 -----------------~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~-dg~~l~~~~~~~~-~~~~~l~~~~l~~ 244 (571)
.....+||++++.+++.++|+.....+..+ .||| ||+.|+|.+.... ....+||.+++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~-~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~-- 223 (388)
T 3pe7_A 147 EDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHP-IYRPYDDSTVAFCHEGPHDLVDARMWLINE-- 223 (388)
T ss_dssp GGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEE-EEETTEEEEEEEEECSCTTTSSCSEEEEET--
T ss_pred cccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCcccccc-EECCCCCCEEEEEEecCCCCCcceEEEEeC--
Confidence 112378999999999999998765545555 4999 9999999987421 12468999998
Q ss_pred CCCCCCCCCeEecCCCc---eEEEEECCCCCEEEEEeeCCCCC-CEEEEEEcCCCce
Q 008274 245 DWNHTLEAPVKLTNGKG---KHVAVLDHNMRNFVDFHDSLDSP-PRILLCSLQDGSL 297 (571)
Q Consensus 245 ~g~~~~~~~~~lt~~~g---~~~~~~s~~g~~~v~~~s~~~~p-~~l~~~~~~~~~~ 297 (571)
++. ..++++.... ...+.|||||+.++|.......+ ..|+++++.+++.
T Consensus 224 ~~~----~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 224 DGT----NMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp TSC----CCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred CCC----ceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 554 5677776542 33458999999998876554433 2599999877763
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.7e-16 Score=149.94 Aligned_cols=217 Identities=12% Similarity=0.127 Sum_probs=133.4
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCC--CCceeecccccccchhhhHHHHhCCcEEEEECCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGG--PCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg--~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
..+...+...++ .+..+ +.+ ..|+||++||. .++.. .|...+..|+ +||.|+++|+||+|
T Consensus 20 ~~~~~~v~~~~~-~~~~~-~~~--------~~p~vv~lHG~G~~~~~~-------~~~~~~~~L~-~~~~vi~~D~~G~G 81 (292)
T 3l80_A 20 ALNKEMVNTLLG-PIYTC-HRE--------GNPCFVFLSGAGFFSTAD-------NFANIIDKLP-DSIGILTIDAPNSG 81 (292)
T ss_dssp CCEEEEECCTTS-CEEEE-EEC--------CSSEEEEECCSSSCCHHH-------HTHHHHTTSC-TTSEEEEECCTTST
T ss_pred ccCcceEEecCc-eEEEe-cCC--------CCCEEEEEcCCCCCcHHH-------HHHHHHHHHh-hcCeEEEEcCCCCC
Confidence 345556666444 45444 211 22899999963 22211 2344455555 69999999999998
Q ss_pred CChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCcc--------
Q 008274 396 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV-------- 467 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~-------- 467 (571)
.+... ......++++.+.+..+++.- ..+++.|+|||+||.+++.++.++|++++++|+.+|.
T Consensus 82 ~S~~~-------~~~~~~~~~~~~~l~~~l~~~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 152 (292)
T 3l80_A 82 YSPVS-------NQANVGLRDWVNAILMIFEHF--KFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAG 152 (292)
T ss_dssp TSCCC-------CCTTCCHHHHHHHHHHHHHHS--CCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHC
T ss_pred CCCCC-------CcccccHHHHHHHHHHHHHHh--CCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhc
Confidence 77511 111234566666666666553 3458999999999999999999999999999998843
Q ss_pred -CC-cc--------cccc------h--------hhhh---------------hcCCCC-CCh---hhhccCCcchhhccC
Q 008274 468 -TS-WD--------GYDT------F--------YTEK---------------YMGLPS-EDP---VGYEYSSVMHHVHKM 504 (571)
Q Consensus 468 -~~-~~--------~~~~------~--------~~~~---------------~~g~~~-~~~---~~~~~~s~~~~~~~~ 504 (571)
.. .. .... . +... +..... ... ..+...+....+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~- 231 (292)
T 3l80_A 153 FSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE- 231 (292)
T ss_dssp TTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-
T ss_pred cccccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-
Confidence 22 00 0000 0 0000 000000 000 00111111123445
Q ss_pred CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 505 ~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
++|+|+++|++|..++++ + .+.+. -.+.+ ++++++||.+ ..++.+.+.+.+.+||+++
T Consensus 232 ~~P~lii~g~~D~~~~~~-~-~~~~~----~~~~~-~~~~~~gH~~-~~e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 232 KIPSIVFSESFREKEYLE-S-EYLNK----HTQTK-LILCGQHHYL-HWSETNSILEKVEQLLSNH 289 (292)
T ss_dssp TSCEEEEECGGGHHHHHT-S-TTCCC----CTTCE-EEECCSSSCH-HHHCHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEccCccccchH-H-HHhcc----CCCce-eeeCCCCCcc-hhhCHHHHHHHHHHHHHhc
Confidence 789999999999998877 4 44432 24556 8999999987 3466788999999999875
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.61 E-value=9e-14 Score=133.48 Aligned_cols=224 Identities=14% Similarity=0.118 Sum_probs=152.8
Q ss_pred eeeeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEE
Q 008274 6 HVLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVV 85 (571)
Q Consensus 6 ~~~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~ 85 (571)
..++.+|....+... -.....+.|||||++|++.. + ..|+++
T Consensus 26 ~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~-~------------------------------------~~i~~~ 67 (297)
T 2ojh_A 26 IFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNS-E------------------------------------GLLYRL 67 (297)
T ss_dssp EEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEE-T------------------------------------TEEEEE
T ss_pred EEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEc-C------------------------------------CeEEEE
Confidence 344555555543332 34467899999999999853 1 147899
Q ss_pred ECCC-CceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCc
Q 008274 86 SAAG-GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCF 164 (571)
Q Consensus 86 dl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~ 164 (571)
|+++ ++.+.+... .....+..+.|+|||+.+++..........|+.+|.++++.+.+...... .
T Consensus 68 d~~~~~~~~~~~~~-------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------~ 132 (297)
T 2ojh_A 68 SLAGDPSPEKVDTG-------FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPS--------Y 132 (297)
T ss_dssp ESSSCCSCEECCCT-------TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSE--------E
T ss_pred eCCCCCCceEeccc-------cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCc--------c
Confidence 9999 887665321 12245566899999998888875544566899999999887665432110 0
Q ss_pred ccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 165 TPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 165 ~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
.. .|++|+ +++....++..+||.++..+++.+.++.....+..+ .|+|+|+.|++.+..++. .+||.+++
T Consensus 133 ~~-----~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~--~~i~~~~~ 204 (297)
T 2ojh_A 133 WH-----GWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGP-DYSPDGRWIYFNSSRTGQ--MQIWRVRV 204 (297)
T ss_dssp EE-----EECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEE-EECTTSSEEEEEECTTSS--CEEEEEET
T ss_pred ce-----EECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccc-eECCCCCEEEEEecCCCC--ccEEEECC
Confidence 00 244544 666677778889999999888888887765555555 499999999999876653 88999887
Q ss_pred CCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCC-------CCCEEEEEEcCCCc
Q 008274 243 YPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLD-------SPPRILLCSLQDGS 296 (571)
Q Consensus 243 ~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~-------~p~~l~~~~~~~~~ 296 (571)
.+. ....++.... ...+.++|+|+++++...... ....|+++++.+++
T Consensus 205 --~~~----~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 205 --DGS----SVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp --TSS----CEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred --CCC----CcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 443 4556665443 334589999999988776532 22468888886554
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.7e-14 Score=142.89 Aligned_cols=126 Identities=12% Similarity=-0.026 Sum_probs=93.2
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhC---------CcEEEEEC
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK---------GILVWKLD 390 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~---------G~~v~~~d 390 (571)
..+.... +|..+++....+.. ...|.||++||.+++.. .|...+..|++. ||.|+++|
T Consensus 69 ~~~~~~i-~g~~i~~~~~~~~~-----~~~~plll~HG~~~s~~-------~~~~~~~~L~~~~~~~~~~~~~~~vi~~d 135 (388)
T 4i19_A 69 PQFTTEI-DGATIHFLHVRSPE-----PDATPMVITHGWPGTPV-------EFLDIIGPLTDPRAHGGDPADAFHLVIPS 135 (388)
T ss_dssp CEEEEEE-TTEEEEEEEECCSS-----TTCEEEEEECCTTCCGG-------GGHHHHHHHHCGGGGTSCGGGCEEEEEEC
T ss_pred CcEEEEE-CCeEEEEEEccCCC-----CCCCeEEEECCCCCCHH-------HHHHHHHHHhCcccccCCCCCCeEEEEEc
Confidence 3444444 78899988777654 23467889999888743 344567778776 99999999
Q ss_pred CCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCcc
Q 008274 391 NRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV 467 (571)
Q Consensus 391 ~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~ 467 (571)
+||+|.+..... ......++.+.+..+.+.- ..++++++||||||.+++.++.++|++++++++.+|.
T Consensus 136 l~G~G~S~~~~~-------~~~~~~~~a~~~~~l~~~l--g~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 203 (388)
T 4i19_A 136 LPGFGLSGPLKS-------AGWELGRIAMAWSKLMASL--GYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQ 203 (388)
T ss_dssp CTTSGGGCCCSS-------CCCCHHHHHHHHHHHHHHT--TCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCC
T ss_pred CCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHc--CCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCC
Confidence 999987653211 1234566666666666542 3468999999999999999999999999999998864
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.60 E-value=8.3e-13 Score=134.01 Aligned_cols=191 Identities=18% Similarity=0.163 Sum_probs=138.2
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
..|+++|++++..+.+.- ....+..++|||||+.+++..... ....|+++|+++|+.+.+...... ..
T Consensus 159 ~~i~i~d~~g~~~~~l~~---------~~~~v~~~~~Spdg~~la~~s~~~-~~~~i~~~d~~tg~~~~l~~~~~~--~~ 226 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHR---------SPQPLMSPAWSPDGSKLAYVTFES-GRSALVIQTLANGAVRQVASFPRH--NG 226 (415)
T ss_dssp EEEEEEETTSCSCEEEEE---------ESSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTTCCEEEEECCSSC--EE
T ss_pred ceEEEEcCCCCCCEEEeC---------CCCcceeeEEcCCCCEEEEEEecC-CCcEEEEEECCCCcEEEeecCCCc--cc
Confidence 378999999887776643 345678899999999998887554 235799999999998876543221 10
Q ss_pred ccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
.+ .|++|+ +++....+|..+||++++.+++.++|+.....+..+ .|+|||++|++.+.+++. .+|
T Consensus 227 -----~~-----~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~-~~spdg~~l~~~s~~~g~--~~i 293 (415)
T 2hqs_A 227 -----AP-----AFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEP-TWFPDSQNLAFTSDQAGR--PQV 293 (415)
T ss_dssp -----EE-----EECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEE-EECTTSSEEEEEECTTSS--CEE
T ss_pred -----CE-----EEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccce-EECCCCCEEEEEECCCCC--cEE
Confidence 11 345555 666777778889999999988888888765455555 499999999999976653 789
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
|.+++ .+. ..++++.... ...+.|||||+++++..... ....|+++++.+++. +.+..
T Consensus 294 ~~~d~--~~~----~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~-g~~~i~~~d~~~~~~-~~l~~ 352 (415)
T 2hqs_A 294 YKVNI--NGG----APQRITWEGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATGGV-QVLSS 352 (415)
T ss_dssp EEEET--TSS----CCEECCCSSSEEEEEEECTTSSEEEEEEECS-SCEEEEEEETTTCCE-EECCC
T ss_pred EEEEC--CCC----CEEEEecCCCcccCeEECCCCCEEEEEECcC-CceEEEEEECCCCCE-EEecC
Confidence 99998 443 4566665433 34569999999998876542 345899999876654 44543
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.59 E-value=4.8e-16 Score=159.82 Aligned_cols=211 Identities=17% Similarity=0.156 Sum_probs=141.2
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCC-cEEEEECCC-CCCCChh--hhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG-ILVWKLDNR-GTARRGL--KFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~d~r-G~~~~~~--~~~~~~~~ 407 (571)
|...+|.|... .+++|+||++|||+........+ ......|+++| ++|+.+||| |..++.. .+. ..
T Consensus 83 L~l~v~~P~~~---~~~~PviV~iHGGg~~~g~~~~~----~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~---~~ 152 (489)
T 1qe3_A 83 LYVNVFAPDTP---SQNLPVMVWIHGGAFYLGAGSEP----LYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFD---EA 152 (489)
T ss_dssp CEEEEEEECSS---CCSEEEEEEECCSTTTSCCTTSG----GGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTC---TT
T ss_pred CEEEEEeCCCC---CCCCCEEEEECCCccccCCCCCc----ccCHHHHHhcCCEEEEecCccCcccccCcccccc---cc
Confidence 66677888652 14589999999987543322211 11256677665 999999999 3222111 110 01
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccCCcccccch--hhh-
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVTSWDGYDTF--YTE- 479 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~--~~~- 479 (571)
..+...+.|+.++++|+.+. ...|+++|+|+|+|+||++++.++... +++|+++|+.+|..++...... ...
T Consensus 153 ~~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~ 232 (489)
T 1qe3_A 153 YSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAASTAAA 232 (489)
T ss_dssp SCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 22333478999999999875 346999999999999999999888753 5789999999998765432211 111
Q ss_pred --hhcCCCCCChhhhccCCcchhh---------ccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCC
Q 008274 480 --KYMGLPSEDPVGYEYSSVMHHV---------HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548 (571)
Q Consensus 480 --~~~g~~~~~~~~~~~~s~~~~~---------~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 548 (571)
..+|.+.+..+.+...+....+ .....|.+++++..|..+.+++..+++++.+..++++.+-..++++|
T Consensus 233 ~~~~~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~vp~~~g~~~~Eg~ 312 (489)
T 1qe3_A 233 FLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRDEGY 312 (489)
T ss_dssp HHHHHTCCTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTTSCSSCCBCBTTTBCSCHHHHHHTTTTTTCCEEEEEETTGGG
T ss_pred HHHHcCCCHHHHHHHHcCCHHHHHHHHHHhhhccccccCCccceEeECCeecCcCHHHHHhcCCCCCCCEEEeeecchhH
Confidence 1235544333333333322211 12234578899999999999999998888877789999999999999
Q ss_pred CCCC
Q 008274 549 MPRR 552 (571)
Q Consensus 549 ~~~~ 552 (571)
.+..
T Consensus 313 ~~~~ 316 (489)
T 1qe3_A 313 LFFT 316 (489)
T ss_dssp GTCC
T ss_pred hhcc
Confidence 8743
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-14 Score=139.96 Aligned_cols=222 Identities=12% Similarity=0.070 Sum_probs=127.9
Q ss_pred eEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChh
Q 008274 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGL 399 (571)
Q Consensus 320 ~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~ 399 (571)
+...+.. +|..+++.... .-|.||++||.+.+.. . |......|+ .+|.|+++|+||+|.+..
T Consensus 6 ~~~~~~~-~~~~~~~~~~g---------~g~~~vllHG~~~~~~---~----w~~~~~~l~-~~~~vi~~Dl~G~G~s~~ 67 (291)
T 3qyj_A 6 EQTIVDT-TEARINLVKAG---------HGAPLLLLHGYPQTHV---M----WHKIAPLLA-NNFTVVATDLRGYGDSSR 67 (291)
T ss_dssp EEEEEEC-SSCEEEEEEEC---------CSSEEEEECCTTCCGG---G----GTTTHHHHT-TTSEEEEECCTTSTTSCC
T ss_pred ceeEEec-CCeEEEEEEcC---------CCCeEEEECCCCCCHH---H----HHHHHHHHh-CCCEEEEEcCCCCCCCCC
Confidence 3444444 67777766432 1256788999877643 3 344456664 589999999999987753
Q ss_pred hhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc---c--
Q 008274 400 KFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY---D-- 474 (571)
Q Consensus 400 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~---~-- 474 (571)
..... .......+++.+.+..+.+.- ..+++.++||||||.+++.++.++|++++++++.++......+ .
T Consensus 68 ~~~~~---~~~~~~~~~~~~~~~~~~~~l--~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~ 142 (291)
T 3qyj_A 68 PASVP---HHINYSKRVMAQDQVEVMSKL--GYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQE 142 (291)
T ss_dssp CCCCG---GGGGGSHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHH
T ss_pred CCCCc---cccccCHHHHHHHHHHHHHHc--CCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhh
Confidence 21100 000112333333333333321 3457999999999999999999999999998887643210000 0
Q ss_pred --------------------------chhhhhhc---CCC--CCCh---hh-----------------hccCC-------
Q 008274 475 --------------------------TFYTEKYM---GLP--SEDP---VG-----------------YEYSS------- 496 (571)
Q Consensus 475 --------------------------~~~~~~~~---g~~--~~~~---~~-----------------~~~~s------- 496 (571)
..+....+ +.. ...+ +. |....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (291)
T 3qyj_A 143 FATAYYHWFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHD 222 (291)
T ss_dssp HHHHTTHHHHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHH
T ss_pred hhHHHHHHHHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhc
Confidence 00000000 000 0000 00 00000
Q ss_pred cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 497 VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 497 ~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
......++++|+|+++|++|...+... ..+.+.+...+++..+++ +||.+ ..++.+.+.+.|.+||.+
T Consensus 223 ~~~~~~~i~~P~Lvi~G~~D~~~~~~~---~~~~~~~~~~~~~~~~~~-~GH~~-~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 223 ELDMKQKISCPVLVLWGEKGIIGRKYD---VLATWRERAIDVSGQSLP-CGHFL-PEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp HTTTTCCBCSCEEEEEETTSSHHHHSC---HHHHHHTTBSSEEEEEES-SSSCH-HHHSHHHHHHHHHHHHHC
T ss_pred chhcCCccccceEEEecccccccchhh---HHHHHHhhcCCcceeecc-CCCCc-hhhCHHHHHHHHHHHHhc
Confidence 001245688999999999996533211 112223333567777886 89976 567889999999999975
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.59 E-value=4.9e-14 Score=137.57 Aligned_cols=198 Identities=16% Similarity=0.105 Sum_probs=117.3
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHH-HHhccCCCCCchhHHHHHHHHHHc
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEA-SIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
|.||++||++++.. .|..++..|++ .+|.|+++|+||+|.+...... ..... ..+|+.+.++.+...
T Consensus 39 p~lvllHG~~~~~~-------~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~~~~~~~----~a~dl~~~l~~l~~~ 107 (316)
T 3c5v_A 39 PVLLLLHGGGHSAL-------SWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAET----MAKDVGNVVEAMYGD 107 (316)
T ss_dssp CEEEEECCTTCCGG-------GGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCTTCCCHHH----HHHHHHHHHHHHHTT
T ss_pred cEEEEECCCCcccc-------cHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCccccCHHH----HHHHHHHHHHHHhcc
Confidence 67899999866532 34556777776 3899999999999987531100 00001 145566666665321
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhc--CCCeeEEEEEcCccCCcc----------------cccch--hhh--------
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVTSWD----------------GYDTF--YTE-------- 479 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~--~~~~~~~~v~~~~~~~~~----------------~~~~~--~~~-------- 479 (571)
+ ..++.|+||||||.+++.++.+ +|+ ++++|+.++..... .+... ...
T Consensus 108 --~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (316)
T 3c5v_A 108 --L-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQI 183 (316)
T ss_dssp --C-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHHHHHHTTSC
T ss_pred --C-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHHHhhhcccc
Confidence 1 2589999999999999999985 577 78888876431100 00000 000
Q ss_pred -----------hhc-CCC--C---C--Chhhh-ccCCc--------------chhhccCCCcEEEEecCCCCCCChHHHH
Q 008274 480 -----------KYM-GLP--S---E--DPVGY-EYSSV--------------MHHVHKMKGKLLLVHGMIDENVHFRHTA 525 (571)
Q Consensus 480 -----------~~~-g~~--~---~--~~~~~-~~~s~--------------~~~~~~~~~p~lli~G~~D~~v~~~~~~ 525 (571)
..+ ... . . ....+ ..... ...+.++++|+|+++|++|...+...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lli~g~~D~~~~~~~-- 261 (316)
T 3c5v_A 184 RNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLT-- 261 (316)
T ss_dssp CCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHHTTHHHHHHHSSSCEEEEESSCCCCCHHHH--
T ss_pred cchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHHHhhcCCCCEEEEEecccccccHHH--
Confidence 000 000 0 0 00000 00000 01223588999999999997643221
Q ss_pred HHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 526 RLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 526 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+ ..+ ....+++++|++||.+ ..+..+.+.+.|.+||.++
T Consensus 262 -~-~~~---~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 300 (316)
T 3c5v_A 262 -I-GQM---QGKFQMQVLPQCGHAV-HEDAPDKVAEAVATFLIRH 300 (316)
T ss_dssp -H-HHH---TTCSEEEECCCCSSCH-HHHSHHHHHHHHHHHHHHT
T ss_pred -H-Hhh---CCceeEEEcCCCCCcc-cccCHHHHHHHHHHHHHhc
Confidence 1 122 2457899999999987 3456788999999999753
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.59 E-value=8.1e-14 Score=140.30 Aligned_cols=190 Identities=12% Similarity=0.085 Sum_probs=127.5
Q ss_pred CceEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEcc-CCeEEEEEEeccCc--cEEEEEEECCCCceEEEEEee
Q 008274 77 NVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQT--KLKVLKFDIKTGQRKVILVEE 153 (571)
Q Consensus 77 ~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~i~~~~~r~~~--~~~i~~~d~~~g~~~~l~~~~ 153 (571)
.....|+++|+++++.+.+.. ....+..+.||| ||+.+++..+.... ...|+.+|+++++.+.|+..
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~~---------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~- 234 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIHQ---------DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH- 234 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEEE---------ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC-
T ss_pred CCcceEEEEECCCCcEEeecc---------CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeecc-
Confidence 345689999999998877643 234567889999 88888887653211 15799999999887766542
Q ss_pred cCCeeeccCCcccCCCCCccCCCe--EEEEEecCCccE--EEEEeCCCceeeceeecCeEEEEEEEEee-cCcEEEEEEc
Q 008274 154 LDSWVNLHDCFTPLDKGVTKYSGG--FIWASEKTGFRH--LYLHDINGTCLGPITEGDWMVEQIVGVNE-ASGQVYFTGT 228 (571)
Q Consensus 154 ~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~--l~~~~~~~~~~~~lT~~~~~~~~~~~~s~-dg~~l~~~~~ 228 (571)
...+..... .|++|+ +++.+.+.+..+ ||++++.+++.+.++..... . ..|++ ||+.|++.+.
T Consensus 235 ~~~~~~~~~---------~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~-~--~~~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 235 AEGESCTHE---------FWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPC-S--HLMSNFDGSLMVGDGC 302 (396)
T ss_dssp CTTEEEEEE---------EECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSE-E--EEEECSSSSEEEEEEC
T ss_pred CCCccccce---------EECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCC-C--CCccCCCCceEEEecC
Confidence 112211111 234444 777777766655 99999988888777754322 2 45999 9998777653
Q ss_pred CCCC------------ceeEEEEEEeCCCCCCCCCCCeEecCCCc------------eEEEEECCCCCEEEEEeeCCCCC
Q 008274 229 LDGP------------LESHLYCAKLYPDWNHTLEAPVKLTNGKG------------KHVAVLDHNMRNFVDFHDSLDSP 284 (571)
Q Consensus 229 ~~~~------------~~~~l~~~~l~~~g~~~~~~~~~lt~~~g------------~~~~~~s~~g~~~v~~~s~~~~p 284 (571)
. .| ....||.+++ .+. ..++|+.... ...+.+||||++++|.... ...
T Consensus 303 ~-~p~~~~~~~~~~~~~~~~i~~~d~--~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~-~~~ 374 (396)
T 3c5m_A 303 D-APVDVADADSYNIENDPFLYVLNT--KAK----SAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF-EGV 374 (396)
T ss_dssp C-C----------CCCCCCEEEEEET--TTT----BCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSS
T ss_pred C-cceeeccccccccCCCCcEEEEec--ccC----ceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecC-CCC
Confidence 2 11 2478999998 433 4456654332 2345899999999887655 456
Q ss_pred CEEEEEEcCCCc
Q 008274 285 PRILLCSLQDGS 296 (571)
Q Consensus 285 ~~l~~~~~~~~~ 296 (571)
+.+|++++.++.
T Consensus 375 ~~l~~~~~~~~~ 386 (396)
T 3c5m_A 375 PAIYIADVPESY 386 (396)
T ss_dssp CEEEEEECCTTC
T ss_pred ceEEEEEEcccc
Confidence 799999986555
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.58 E-value=9.4e-14 Score=152.02 Aligned_cols=232 Identities=10% Similarity=-0.030 Sum_probs=147.1
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
.++.|||||++|+|.+.+...-. + .....++++|+++++.++++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r---------------------~------~~~~~~~~~d~~~~~~~~l~--------- 108 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWR---------------------H------SYTASYDIYDLNKRQLITEE--------- 108 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSS---------------------S------CEEEEEEEEETTTTEECCSS---------
T ss_pred cceEECCCCCEEEEEECCeeeEE---------------------E------ccceEEEEEECCCCcEEEcc---------
Confidence 34899999999999765422200 0 01246899999999876552
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee-eccCC-------cccCCCCCccCCCe
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV-NLHDC-------FTPLDKGVTKYSGG 177 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~-~~~~~-------~~~~~~~~~~~~d~ 177 (571)
........++|||||+.|+|+.++ +||++|+++|+.++|+......+. +..+. |.. ...+.|+||+
T Consensus 109 ~~~~~~~~~~~SPdG~~la~~~~~-----~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~-~~~~~wSpDg 182 (740)
T 4a5s_A 109 RIPNNTQWVTWSPVGHKLAYVWNN-----DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA-YSALWWSPNG 182 (740)
T ss_dssp CCCTTEEEEEECSSTTCEEEEETT-----EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS-SBCEEECTTS
T ss_pred cCCCcceeeEECCCCCEEEEEECC-----eEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC-CcceEECCCC
Confidence 234467789999999999998542 499999999999888754322211 11000 100 1112466776
Q ss_pred --EEEEEecCC---------------------------------ccEEEEEeCCC---c---eeeceee------cCeEE
Q 008274 178 --FIWASEKTG---------------------------------FRHLYLHDING---T---CLGPITE------GDWMV 210 (571)
Q Consensus 178 --~~~~s~~~g---------------------------------~~~l~~~~~~~---~---~~~~lT~------~~~~~ 210 (571)
++|.+.+.+ ...|+++++++ + +.++|+. ....+
T Consensus 183 ~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (740)
T 4a5s_A 183 TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYL 262 (740)
T ss_dssp SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEE
T ss_pred CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEE
Confidence 666543321 12689999988 7 5666764 34445
Q ss_pred EEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCC---CCCCeEe-cC-CCc------eEEEEECCCCCEEEEEee
Q 008274 211 EQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHT---LEAPVKL-TN-GKG------KHVAVLDHNMRNFVDFHD 279 (571)
Q Consensus 211 ~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~---~~~~~~l-t~-~~g------~~~~~~s~~g~~~v~~~s 279 (571)
..+ .|||||+.+++..++... ...|+.+++. +... ......+ +. ..+ ...+.|||||+.+++..+
T Consensus 263 ~~~-~wspdg~~~~~~~~r~~~-~~~i~~~d~~--tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s 338 (740)
T 4a5s_A 263 CDV-TWATQERISLQWLRRIQN-YSVMDICDYD--ESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS 338 (740)
T ss_dssp EEE-EEEETTEEEEEEEESSTT-EEEEEEEEEE--TTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEE
T ss_pred EEE-EEeCCCeEEEEEeCCCCC-EEEEEEEECC--CCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEE
Confidence 555 599999988887776542 5778888883 3210 0012222 11 111 124689999999986677
Q ss_pred CCCCCCEEEEEEcCCCceeEeccCC
Q 008274 280 SLDSPPRILLCSLQDGSLVLPLYEQ 304 (571)
Q Consensus 280 ~~~~p~~l~~~~~~~~~~~~~l~~~ 304 (571)
..+.-..||++++.++ ..+.|+..
T Consensus 339 ~~~G~~~l~~~~~~~~-~~~~lT~g 362 (740)
T 4a5s_A 339 NEEGYRHICYFQIDKK-DCTFITKG 362 (740)
T ss_dssp CTTSCEEEEEEETTCS-SCEESCCS
T ss_pred cCCCceEEEEEECCCC-ceEecccC
Confidence 6667789999998544 45667654
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-14 Score=136.25 Aligned_cols=244 Identities=15% Similarity=0.094 Sum_probs=144.6
Q ss_pred CCeEEEEEcC-CCcEEEEEEEcCCCCCC----CCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCC
Q 008274 318 PPDIVQIQAN-DGTVLYGALYKPDESRY----GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR 392 (571)
Q Consensus 318 ~~~~~~~~~~-dg~~l~~~~~~P~~~~~----~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r 392 (571)
....+++.+. -|.++.+.+|.|+++.. ..+++|||+++||.+++.. .|... ....+.+.+.|.+++++|-.
T Consensus 13 ~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~---~w~~~-~~~~~~~~~~~~~~v~p~~~ 88 (299)
T 4fol_A 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPD---NASEK-AFWQFQADKYGFAIVFPDTS 88 (299)
T ss_dssp EEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCHH---HHHHH-SCHHHHHHHHTCEEEEECSS
T ss_pred EEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChH---HHHHh-chHhHHHHHcCchhhccCCC
Confidence 3455666654 47889999999987532 2468999999999776543 44321 12345667789999999842
Q ss_pred --CCCC-----------ChhhhH-H------HHhccCCCCCchhHHHHHHHHHH----cCCCcCCcEEEEeechHHHHHH
Q 008274 393 --GTAR-----------RGLKFE-A------SIKHNCGRIDAEDQLTGAEWLIK----QGLAKVGHIGLYGWSYGGYLSA 448 (571)
Q Consensus 393 --G~~~-----------~~~~~~-~------~~~~~~~~~~~~D~~~~~~~l~~----~~~~d~~~i~l~G~S~GG~~a~ 448 (571)
+..- .+..+. . ....++.....+++...++.--. +...+.++.+|.|+||||+.|+
T Consensus 89 p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl 168 (299)
T 4fol_A 89 PRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAI 168 (299)
T ss_dssp CCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHH
T ss_pred cceeecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHH
Confidence 1100 000000 0 00001000012233333322111 1113457899999999999999
Q ss_pred HHHhcC--CCeeEEEEEcCccCCcccccc--hhhhhhcCCCCCChhhhccCCcchhhccCC----CcEEEEecCCCCCCC
Q 008274 449 ITLARF--PDVFQCAVSGAPVTSWDGYDT--FYTEKYMGLPSEDPVGYEYSSVMHHVHKMK----GKLLLVHGMIDENVH 520 (571)
Q Consensus 449 ~~~~~~--~~~~~~~v~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~----~p~lli~G~~D~~v~ 520 (571)
.++.++ |++|.++.+.+|..+...... .....+++. +...+...++...+++.+ .++++.+|+.|....
T Consensus 169 ~~al~~~~~~~~~~~~s~s~~~~p~~~~~~~~~~~~~~g~---~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~D~f~~ 245 (299)
T 4fol_A 169 CGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGE---EKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLE 245 (299)
T ss_dssp HHHHHTGGGTCCSEEEEESCCCCGGGSHHHHHHHHHHTC--------CGGGCHHHHGGGSCCCTTCCEEEEEETTCTTHH
T ss_pred HHHHhCCCCCceEEEEecccccCccccccccccccccccc---chhhhhhcCHHHHHHhcccCCCCceEEEecCCCcchh
Confidence 999985 678899999998876432211 111233343 233445555555444432 479999999998754
Q ss_pred hH-HHHHHHHHHHHcCCC--eeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 521 FR-HTARLINALVAARKP--YEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 521 ~~-~~~~~~~~l~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.+ ..+.+.+++++++.+ ++++..||.+|+... ...+.+.-++|..++|
T Consensus 246 ~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f---~~~fi~dhl~fha~~L 296 (299)
T 4fol_A 246 EHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYF---VSTFVPEHAEFHARNL 296 (299)
T ss_dssp HHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHT
T ss_pred hhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHH---HHHHHHHHHHHHHHhc
Confidence 32 236788888888865 788889999998632 4455666778877765
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.56 E-value=5.2e-13 Score=134.40 Aligned_cols=223 Identities=11% Similarity=0.050 Sum_probs=141.6
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||++|+|+...... ..|+++|+++++.++++..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~---------------------------------~~l~~~d~~~~~~~~l~~~------ 78 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGN---------------------------------RNYYLLNLETQQAVQLTEG------ 78 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSS---------------------------------CEEEEEETTTTEEEECCCS------
T ss_pred eecCcCCCCCCEEEEEEecCCC---------------------------------ceEEEEECCCCcEEEeecC------
Confidence 4568899999999997654211 2578899999887766331
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc------------------CCccc
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH------------------DCFTP 166 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~------------------~~~~~ 166 (571)
.......+.|||||+.|++...+. .|+++|+++|+.+.++.... .|...+ ..+.|
T Consensus 79 --~~~~~~~~~~spdg~~l~~~~~~~----~l~~~d~~~~~~~~~~~~~~-~~~~~g~~l~~~~~~~~~~~~~~~~~~sp 151 (396)
T 3c5m_A 79 --KGDNTFGGFISTDERAFFYVKNEL----NLMKVDLETLEEQVIYTVDE-EWKGYGTWVANSDCTKLVGIEILKRDWQP 151 (396)
T ss_dssp --SCBCTTTCEECTTSSEEEEEETTT----EEEEEETTTCCEEEEEECCT-TEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred --CCCccccceECCCCCEEEEEEcCC----cEEEEECCCCCcEEEEeccc-ccCCCCCEEEeccCCccccccccccccCC
Confidence 111122268999999888887654 48999999888877765322 132210 00000
Q ss_pred ------------------------CC-------------CCCccCC-Ce--EEEEEecCCc----cEEEEEeCCCceeec
Q 008274 167 ------------------------LD-------------KGVTKYS-GG--FIWASEKTGF----RHLYLHDINGTCLGP 202 (571)
Q Consensus 167 ------------------------~~-------------~~~~~~~-d~--~~~~s~~~g~----~~l~~~~~~~~~~~~ 202 (571)
.. ..+.|++ |+ +++.++ .+. .+||++++++++.+.
T Consensus 152 dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~ 230 (396)
T 3c5m_A 152 LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRK 230 (396)
T ss_dssp CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEE
T ss_pred CCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeE
Confidence 00 0013445 33 556554 333 689999998888777
Q ss_pred eeec--CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECC-CCCEEEEEee
Q 008274 203 ITEG--DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDH-NMRNFVDFHD 279 (571)
Q Consensus 203 lT~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~-~g~~~v~~~s 279 (571)
|+.. ...+..+ .|+|||+.|+|.+...+.....||.+++ .+. ..++++..++.. ..+|| ||+.+++..+
T Consensus 231 l~~~~~~~~~~~~-~~spdg~~l~~~~~~~~~~~~~l~~~d~--~~g----~~~~l~~~~~~~-~~~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 231 IKEHAEGESCTHE-FWIPDGSAMAYVSYFKGQTDRVIYKANP--ETL----ENEEVMVMPPCS-HLMSNFDGSLMVGDGC 302 (396)
T ss_dssp SSCCCTTEEEEEE-EECTTSSCEEEEEEETTTCCEEEEEECT--TTC----CEEEEEECCSEE-EEEECSSSSEEEEEEC
T ss_pred eeccCCCccccce-EECCCCCEEEEEecCCCCccceEEEEEC--CCC----CeEEeeeCCCCC-CCccCCCCceEEEecC
Confidence 7763 3445555 5999999999998765543456999998 333 455665444444 78999 9997776443
Q ss_pred C------------CCCCCEEEEEEcCCCceeEeccC
Q 008274 280 S------------LDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 280 ~------------~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
. ......++++++.+++ .+.|..
T Consensus 303 ~~p~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~l~~ 337 (396)
T 3c5m_A 303 DAPVDVADADSYNIENDPFLYVLNTKAKS-AQKLCK 337 (396)
T ss_dssp CC----------CCCCCCEEEEEETTTTB-CCEEEE
T ss_pred CcceeeccccccccCCCCcEEEEecccCc-eEEccC
Confidence 2 0123689999986665 344443
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-12 Score=127.33 Aligned_cols=193 Identities=11% Similarity=0.024 Sum_probs=128.9
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||++|||++.+... ...+||++|+++++.+++...
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~-------------------------------~~~~l~~~~~~~g~~~~l~~~------ 103 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEK-------------------------------KVSEIWVADLETLSSKKILEA------ 103 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTT-------------------------------TEEEEEEEETTTTEEEEEEEE------
T ss_pred CCCeEECCCCCEEEEEEeccCC-------------------------------CcceEEEEECCCCceEEEEcC------
Confidence 4568999999999998754311 124789999999988877542
Q ss_pred CCCCceeEEEEEccCCeEEEEEEecc-----------------------CccEEEEEEECCCCce-EEEEEeecCCeeec
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRS-----------------------QTKLKVLKFDIKTGQR-KVILVEELDSWVNL 160 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~-----------------------~~~~~i~~~d~~~g~~-~~l~~~~~~~w~~~ 160 (571)
.. +..+.|||||+.|++...+. .....|+++|+++|+. +.|+. . ...
T Consensus 104 ---~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~--- 174 (347)
T 2gop_A 104 ---KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFS--- 174 (347)
T ss_dssp ---SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTC---
T ss_pred ---CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-Ccc---
Confidence 23 78899999999888887531 1146799999999998 77765 2 211
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCC-------ccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCC--
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTG-------FRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDG-- 231 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g-------~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~-- 231 (571)
.+ .|++|++++.+...+ ..+||.++ +++.++|+.+ .... .+||||++|+|.+....
T Consensus 175 ----~~-----~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~~---~~spdg~~l~~~~~~~~~~ 239 (347)
T 2gop_A 175 ----SG-----IWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VSFY---AVDSDGERILLYGKPEKKY 239 (347)
T ss_dssp ----EE-----EEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ESEE---EEEECSSCEEEEECCSSSC
T ss_pred ----cc-----cCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccC-ccee---eECCCCCEEEEEEccccCC
Confidence 11 356777666665432 56899999 6777888875 3222 34999999999987542
Q ss_pred -CceeEEEEEEeCCCCCCCCCCCeEecCC-Cc-eEE-EEECCCCCEEEEEeeCCCCCCEEEEEE
Q 008274 232 -PLESHLYCAKLYPDWNHTLEAPVKLTNG-KG-KHV-AVLDHNMRNFVDFHDSLDSPPRILLCS 291 (571)
Q Consensus 232 -~~~~~l~~~~l~~~g~~~~~~~~~lt~~-~g-~~~-~~~s~~g~~~v~~~s~~~~p~~l~~~~ 291 (571)
....+||.++ ++ ..++++.. .. ... +.++ || ++++.+... -..|| ++
T Consensus 240 ~~~~~~l~~~d---~~-----~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~-~~~l~-~~ 290 (347)
T 2gop_A 240 MSEHNKLYIYD---GK-----EVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEG-SVNLY-IW 290 (347)
T ss_dssp CCSSCEEEEEC---SS-----CEEESSTTCCSEEEEEEEET-TE--EEEEEEETT-EEEEE-EE
T ss_pred ccccceEEEEC---CC-----ceEeccccCCcccCCccEEc-Cc--EEEEEecCC-cEEEE-Ec
Confidence 1246888876 22 45566654 23 233 5788 77 555554433 34666 66
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.9e-12 Score=126.56 Aligned_cols=231 Identities=14% Similarity=0.147 Sum_probs=141.5
Q ss_pred eeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCC---CceEEEEE
Q 008274 8 LQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGAS---NVKVRLGV 84 (571)
Q Consensus 8 ~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~---~~~~~l~~ 84 (571)
++-+|...-++..+. ...+.|||||++|+|.+.+....... .....+.|...|.. ....+|++
T Consensus 91 ~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~------------~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (347)
T 2gop_A 91 DLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDF------------IFEDDVPAWFDDLGFFDGEKTTFWI 156 (347)
T ss_dssp ETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------------------CCCC---------CEEEEEE
T ss_pred ECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCc------------EEEcccceeecCcccccCccceEEE
Confidence 344455444443322 56789999999999987642111110 12233444444421 23568999
Q ss_pred EECCCCce-EEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCc------cEEEEEEECCCCceEEEEEeecCCe
Q 008274 85 VSAAGGPV-SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQT------KLKVLKFDIKTGQRKVILVEELDSW 157 (571)
Q Consensus 85 ~dl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~------~~~i~~~d~~~g~~~~l~~~~~~~w 157 (571)
+|+++++. +.++. . .+..+.||||| +++..++... ...||.+| +|+.+.|+.. ..
T Consensus 157 ~d~~~~~~~~~l~~----------~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~-- 218 (347)
T 2gop_A 157 FDTESEEVIEEFEK----------P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VS-- 218 (347)
T ss_dssp EETTTTEEEEEEEE----------E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ES--
T ss_pred EECCCCeEEeeecC----------C-CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCceEEeccC-cc--
Confidence 99999987 66532 2 45578999999 6666555431 56899999 8888888764 11
Q ss_pred eeccCCcccCCCCCccCCCeEEEEEecC-----CccEEEEEeCCCceeeceeec-CeEEEEEEEEeecCcEEEEEEcCCC
Q 008274 158 VNLHDCFTPLDKGVTKYSGGFIWASEKT-----GFRHLYLHDINGTCLGPITEG-DWMVEQIVGVNEASGQVYFTGTLDG 231 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~~~~~s~~~-----g~~~l~~~~~~~~~~~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~~ 231 (571)
.. .+ +.++..+++.+... ...+||+++ +++.+.|+.+ ...+...+.|+ || ++|++..++
T Consensus 219 ~~-----~~-----spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~ 283 (347)
T 2gop_A 219 FY-----AV-----DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEG 283 (347)
T ss_dssp EE-----EE-----EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEEETT
T ss_pred ee-----eE-----CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc--EEEEEecCC
Confidence 11 11 11233477776543 246899999 5667777765 45666534588 76 888877666
Q ss_pred CceeEEEEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 232 PLESHLYCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 232 ~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
..+|| ++ ++ ..++++...+ ...+++++ .++++.++...|+++|.++ ++ .++|+.
T Consensus 284 --~~~l~-~~---~g-----~~~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~---g~-~~~lt~ 338 (347)
T 2gop_A 284 --SVNLY-IW---DG-----EIKPIAKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD---GE-EKQLTD 338 (347)
T ss_dssp --EEEEE-EE---SS-----SEEEEECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES---SS-EEECCC
T ss_pred --cEEEE-Ec---CC-----ceEEEecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC---Cc-EEEecc
Confidence 48888 77 23 3456655444 34557888 4788888889999999986 44 456665
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.2e-12 Score=123.62 Aligned_cols=214 Identities=13% Similarity=0.062 Sum_probs=142.0
Q ss_pred eeeeee-cccceeeeecc-CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEE
Q 008274 6 HVLQTH-GLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 83 (571)
Q Consensus 6 ~~~~~~-g~~~~~~~~~~-~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 83 (571)
..++.+ |...-+....- .....+.|||||++|++...+... ...|+
T Consensus 66 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--------------------------------~~~l~ 113 (297)
T 2ojh_A 66 RLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFG--------------------------------KSAIY 113 (297)
T ss_dssp EEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTS--------------------------------SCEEE
T ss_pred EEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCC--------------------------------cceEE
Confidence 344445 55444433221 334678999999999997643211 13689
Q ss_pred EEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCC
Q 008274 84 VVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDC 163 (571)
Q Consensus 84 ~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~ 163 (571)
.+++++++.+.+.. ......+.|+|||+.+++....+ ....||.+|.++++.+.+...... ..
T Consensus 114 ~~~~~~~~~~~~~~----------~~~~~~~~~spdg~~l~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~--~~---- 176 (297)
T 2ojh_A 114 LLPSTGGTPRLMTK----------NLPSYWHGWSPDGKSFTYCGIRD-QVFDIYSMDIDSGVETRLTHGEGR--ND---- 176 (297)
T ss_dssp EEETTCCCCEECCS----------SSSEEEEEECTTSSEEEEEEEET-TEEEEEEEETTTCCEEECCCSSSC--EE----
T ss_pred EEECCCCceEEeec----------CCCccceEECCCCCEEEEEECCC-CceEEEEEECCCCcceEcccCCCc--cc----
Confidence 99999888766533 12366689999999888776655 346799999999887665432211 10
Q ss_pred cccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCC------cee
Q 008274 164 FTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP------LES 235 (571)
Q Consensus 164 ~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~------~~~ 235 (571)
. ..|++++ +++.+..++..+||.++..++..+.++.....+..+ .|+|+|++|++.+...+. ...
T Consensus 177 --~----~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~ 249 (297)
T 2ojh_A 177 --G----PDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFP-HPSPSGDKVVFVSYDADVFDHPRDLDV 249 (297)
T ss_dssp --E----EEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEE-EECTTSSEEEEEEEETTCCSCCSSEEE
T ss_pred --c----ceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCe-EECCCCCEEEEEEcCCCCCcccccCce
Confidence 0 1344554 555666678899999998888888888776556555 499999999999875431 347
Q ss_pred EEEEEEeCCCCCCCCCCCeEecC----CCceEEEEECCCCCEEEEEeeCC
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTN----GKGKHVAVLDHNMRNFVDFHDSL 281 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~----~~g~~~~~~s~~g~~~v~~~s~~ 281 (571)
.|+.+++ .+. +.+++.. ......+.|+|||+++++.....
T Consensus 250 ~l~~~d~--~~~----~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 250 RVQLMDM--DGG----NVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEET--TSC----SCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEec--CCC----CceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 8999998 433 3333332 12234468999999998876553
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.49 E-value=8.7e-13 Score=144.11 Aligned_cols=231 Identities=11% Similarity=0.014 Sum_probs=140.9
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||++|+|...+..... + .....|++||+++++.+.+...
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~---------------------~------~~~~~i~~~d~~~~~~~~l~~~------ 109 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQ---------------------H------SYTGYYVLSKIPHGDPQSLDPP------ 109 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSS---------------------S------CCCSEEEEEESSSCCCEECCCT------
T ss_pred cceEEECCCCCEEEEEecCcccee---------------------e------cceeeEEEEECCCCceEeccCC------
Confidence 567999999999999754322200 0 0013689999999987666432
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCe-eeccCC-------cccCCCCCccCCC
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW-VNLHDC-------FTPLDKGVTKYSG 176 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w-~~~~~~-------~~~~~~~~~~~~d 176 (571)
......+..++|||||+.|++.+++ .|+++|+++|+.++++....... .+..+. +.. .....|++|
T Consensus 110 ~~~~~~~~~~~~SPdG~~la~~~~~-----~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~-~~~~~~SpD 183 (723)
T 1xfd_A 110 EVSNAKLQYAGWGPKGQQLIFIFEN-----NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT-HIAHWWSPD 183 (723)
T ss_dssp TCCSCCCSBCCBCSSTTCEEEEETT-----EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS-SEEEEECTT
T ss_pred ccccccccccEECCCCCEEEEEECC-----eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccC-cceEEECCC
Confidence 1122235568999999999998762 59999999999988876422110 000000 000 011245666
Q ss_pred e--EEEEEecC---------------------------C----ccEEEEEeCCCcee-eceeec------CeEEEEEEEE
Q 008274 177 G--FIWASEKT---------------------------G----FRHLYLHDINGTCL-GPITEG------DWMVEQIVGV 216 (571)
Q Consensus 177 ~--~~~~s~~~---------------------------g----~~~l~~~~~~~~~~-~~lT~~------~~~~~~~~~~ 216 (571)
+ +++.+... | ...|+++++.+++. +.|+.+ ...+..+ .|
T Consensus 184 g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~-~~ 262 (723)
T 1xfd_A 184 GTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMV-KW 262 (723)
T ss_dssp SSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEE-EE
T ss_pred CCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEE-EE
Confidence 5 55655432 1 23899999988773 667653 4455555 49
Q ss_pred eecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC--CCce-----EEEEECCCCCEEEEEeeCCCC----CC
Q 008274 217 NEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN--GKGK-----HVAVLDHNMRNFVDFHDSLDS----PP 285 (571)
Q Consensus 217 s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~--~~g~-----~~~~~s~~g~~~v~~~s~~~~----p~ 285 (571)
||||+.|++..++.. ....|+.+++ .+. +..++.. ..+. ..+.|||||+++++..+.... -.
T Consensus 263 SpDg~~l~~~~~~~~-~~~~i~~~d~--~~g----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 335 (723)
T 1xfd_A 263 ATSTKVAVTWLNRAQ-NVSILTLCDA--TTG----VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFY 335 (723)
T ss_dssp SSSSEEEEEEEETTS-CEEEEEEEET--TTC----CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEE
T ss_pred eCCCeEEEEEEcCCC-CeEEEEEEeC--CCC----cceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCccee
Confidence 999998877766643 3578999998 332 3333321 1121 256899999999887443332 23
Q ss_pred EEEEEEcCCCce---eEecc
Q 008274 286 RILLCSLQDGSL---VLPLY 302 (571)
Q Consensus 286 ~l~~~~~~~~~~---~~~l~ 302 (571)
.|++++..++.. .+.|+
T Consensus 336 ~l~~~d~~~~~~~~~~~~l~ 355 (723)
T 1xfd_A 336 HITVSSSQPNSSNDNIQSIT 355 (723)
T ss_dssp EEEEECSSCCSSSCCCCBSC
T ss_pred EEEEEeccCCCCccceeEee
Confidence 688887323333 44454
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=2.8e-14 Score=137.11 Aligned_cols=141 Identities=16% Similarity=0.066 Sum_probs=96.6
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeE-EEEEcCccCCcccccchhhhhhcCC--CCC-Chh---hhccCCcchh
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQ-CAVSGAPVTSWDGYDTFYTEKYMGL--PSE-DPV---GYEYSSVMHH 500 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~g~--~~~-~~~---~~~~~s~~~~ 500 (571)
..+|++||+|+|+|+||++++.+++.+|++|+ ++++.++.......... ...++.. +.. ..+ .....+++..
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 84 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY-YTSCMYNGYPSITTPTANMKSWSGNQIAS 84 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC-GGGGSTTCCCCCHHHHHHHHHHBTTTBCC
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHH-HHHHhhccCCCCCCHHHHHHHhhcccCCh
Confidence 45899999999999999999999999999998 77766653211110000 1111111 100 001 1111144555
Q ss_pred hccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcCC--CeeEEEcCCCCCCCCCCCc------------------HHHH
Q 008274 501 VHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARK--PYEILIFPDERHMPRRHRD------------------RIYM 559 (571)
Q Consensus 501 ~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~--~~~~~~~~~~~H~~~~~~~------------------~~~~ 559 (571)
+.+++ .|+||+||++|.+||++++++++++|++.+. +++++++++++|++..... ..+.
T Consensus 85 ~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d~ 164 (318)
T 2d81_A 85 VANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYDG 164 (318)
T ss_dssp GGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSCH
T ss_pred hHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCChH
Confidence 55555 5999999999999999999999999998873 7899999999999732211 2456
Q ss_pred HHHHHHHHHH
Q 008274 560 EERIWEFIER 569 (571)
Q Consensus 560 ~~~i~~fl~~ 569 (571)
..+|++||..
T Consensus 165 ~~~i~~ff~g 174 (318)
T 2d81_A 165 AGAALKWIYG 174 (318)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhc
Confidence 6788888854
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.5e-12 Score=136.77 Aligned_cols=203 Identities=11% Similarity=0.055 Sum_probs=133.3
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.+||||++|||++..++. .+|| ++++++.++++..
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~---------------------------------~~lw--~~~~g~~~~lt~~------ 62 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGS---------------------------------VNAY--LYDGGETVKLNRE------ 62 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTE---------------------------------EEEE--EEETTEEEECCSS------
T ss_pred hheeecCCCCCeEEEEEccCCc---------------------------------eeEE--EEcCCCcEeeecc------
Confidence 4567899999999998754322 2344 4678887776431
Q ss_pred CCCCceeEEEEEccCCeEEEEEEec--cCccEEEEEEEC--CCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNR--SQTKLKVLKFDI--KTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIW 180 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r--~~~~~~i~~~d~--~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~ 180 (571)
....+..+.|||| + ++++..+ ......||.++. +++.. +++....... ..| +.+++++++
T Consensus 63 --~~~~~~~~~~spd-~-~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~~~~----~~~-------s~dg~~~~~ 126 (582)
T 3o4h_A 63 --PINSVLDPHYGVG-R-VILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKPMRI----LSG-------VDTGEAVVF 126 (582)
T ss_dssp --CCSEECEECTTCS-E-EEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSCSBEE----EEE-------EECSSCEEE
T ss_pred --cccccccccCCCC-e-EEEEeccCCCCcceEEEEEeccCCCccc-cccCCCCcee----eee-------CCCCCeEEE
Confidence 2246778999999 4 6666655 334568999999 65543 4432111110 011 224556777
Q ss_pred EEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC
Q 008274 181 ASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK 260 (571)
Q Consensus 181 ~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~ 260 (571)
.+...+... ++++++++.++|+.... .++ .|||||+.|++.+.+.+. ...||.+++ ++. ..++|+...
T Consensus 127 ~s~~~~~~~--l~d~~~g~~~~l~~~~~--~~~-~~spDG~~la~~~~~~~~-~~~i~~~d~--~~g----~~~~l~~~~ 194 (582)
T 3o4h_A 127 TGATEDRVA--LYALDGGGLRELARLPG--FGF-VSDIRGDLIAGLGFFGGG-RVSLFTSNL--SSG----GLRVFDSGE 194 (582)
T ss_dssp EEECSSCEE--EEEEETTEEEEEEEESS--CEE-EEEEETTEEEEEEEEETT-EEEEEEEET--TTC----CCEEECCSS
T ss_pred EecCCCCce--EEEccCCcEEEeecCCC--ceE-EECCCCCEEEEEEEcCCC-CeEEEEEcC--CCC----CceEeecCC
Confidence 766655433 44777888888887543 344 499999999998876442 366999998 443 567888765
Q ss_pred c-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCcee
Q 008274 261 G-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLV 298 (571)
Q Consensus 261 g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~ 298 (571)
+ ...+.|||||++++ . ++......|+++++.+++..
T Consensus 195 ~~~~~~~~SpDG~~l~-~-~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 195 GSFSSASISPGMKVTA-G-LETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEEECTTSCEEE-E-EECSSCEEEEEECTTTCCEE
T ss_pred CccccceECCCCCEEE-E-ccCCCeeEEEEEcCCCCcEE
Confidence 5 35569999999988 3 33344468999998766643
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.1e-13 Score=132.94 Aligned_cols=200 Identities=12% Similarity=-0.074 Sum_probs=118.0
Q ss_pred CceEEEEEcCC--CCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 348 PYKTLISVYGG--PCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 348 ~~P~vv~~hGg--~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
..|.||++||. +++.. .|..++..| +.||.|+.+|+||+|.+..... .... ..+++.+.++.+.
T Consensus 80 ~~~~lv~lhG~~~~~~~~-------~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~~~--~~~~----~~~~~~~~l~~~~ 145 (319)
T 3lcr_A 80 LGPQLILVCPTVMTTGPQ-------VYSRLAEEL-DAGRRVSALVPPGFHGGQALPA--TLTV----LVRSLADVVQAEV 145 (319)
T ss_dssp SSCEEEEECCSSTTCSGG-------GGHHHHHHH-CTTSEEEEEECTTSSTTCCEES--SHHH----HHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCcCCCHH-------HHHHHHHHh-CCCceEEEeeCCCCCCCCCCCC--CHHH----HHHHHHHHHHHhc
Confidence 34788999993 33321 345566777 7899999999999985432110 0000 0223333333321
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcC---CCeeEEEEEcCccCCccc--ccchhh--------hh---hcCCC--CC
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARF---PDVFQCAVSGAPVTSWDG--YDTFYT--------EK---YMGLP--SE 487 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~---~~~~~~~v~~~~~~~~~~--~~~~~~--------~~---~~g~~--~~ 487 (571)
+..++.|+||||||.++..++.++ |+.++++|+.++...... ....+. .+ +.... ..
T Consensus 146 -----~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (319)
T 3lcr_A 146 -----ADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQ 220 (319)
T ss_dssp -----TTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_pred -----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhH
Confidence 236899999999999999998876 888888888766543211 100000 00 10110 00
Q ss_pred Ch---hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHH
Q 008274 488 DP---VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIW 564 (571)
Q Consensus 488 ~~---~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 564 (571)
.. ..+...........+++|+|+++|++ ..+++.....+.+.+. ...+++++++..|.+...++...+.+.|.
T Consensus 221 ~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~---~~~~~~~~~g~H~~~~~~~~~~~va~~i~ 296 (319)
T 3lcr_A 221 RITAQVWCLELLRGWRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLA---AMGQVVEAPGDHFTIIEGEHVASTAHIVG 296 (319)
T ss_dssp HHHHHHHHHHHTTTCCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHH---TCSEEEEESSCTTGGGSTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCC---CCceEEEeCCCcHHhhCcccHHHHHHHHH
Confidence 00 00000000011256789999999988 5566666666666553 45788888874444433368889999999
Q ss_pred HHHHHh
Q 008274 565 EFIERT 570 (571)
Q Consensus 565 ~fl~~~ 570 (571)
+||.+.
T Consensus 297 ~fL~~~ 302 (319)
T 3lcr_A 297 DWLREA 302 (319)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999863
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=5.6e-12 Score=137.26 Aligned_cols=220 Identities=13% Similarity=0.042 Sum_probs=140.7
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||++|||.+.+.+.. ...|+++|+++|+.....+.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~-------------------------------~~~i~v~d~~tg~~~~~~~~------ 169 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSD-------------------------------WVTIKFMKVDGAKELPDVLE------ 169 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCS-------------------------------CEEEEEEETTTTEEEEEEEE------
T ss_pred EEEEEECCCCCEEEEEEcCCCCc-------------------------------eEEEEEEECCCCCCCccccc------
Confidence 35789999999999987653331 13789999999998776442
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccC------------ccEEEEEEECCCCce--EEEEEeec-CCeeeccCCcccCCC
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQ------------TKLKVLKFDIKTGQR--KVILVEEL-DSWVNLHDCFTPLDK 169 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~------------~~~~i~~~d~~~g~~--~~l~~~~~-~~w~~~~~~~~~~~~ 169 (571)
......++|||||+.|++.+.... ...+||++++.+++. +.+..... ..|.. .+
T Consensus 170 ---~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~-----~~--- 238 (710)
T 2xdw_A 170 ---RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMG-----GA--- 238 (710)
T ss_dssp ---EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE-----EE---
T ss_pred ---CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEE-----EE---
Confidence 112446899999998888876542 145799999999874 34433322 22211 01
Q ss_pred CCccCCCe--EEEEEecCC--ccEEEEEeCCC------c--eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 170 GVTKYSGG--FIWASEKTG--FRHLYLHDING------T--CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 170 ~~~~~~d~--~~~~s~~~g--~~~l~~~~~~~------~--~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
.+++|+ +++.+.+.. ..+||++++++ + +.+.|+.+...... .|+++|+.|||.++.+.+ ..+|
T Consensus 239 --~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~-~~~l 313 (710)
T 2xdw_A 239 --ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD--YVTNEGTVFTFKTNRHSP-NYRL 313 (710)
T ss_dssp --EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE--EEEEETTEEEEEECTTCT-TCEE
T ss_pred --EEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE--EEeccCCEEEEEECCCCC-CCEE
Confidence 345555 555555432 57999999876 4 56777765322222 389999999999987653 5889
Q ss_pred EEEEeCCCCCCCCCCCeEecCC-C--ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNG-K--GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~-~--g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
+.+++ ++... ...+.|+.. + ....+.+++ +..++++.+.. ....|+++++.+++..+.|.
T Consensus 314 ~~~d~--~~~~~-~~~~~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~-g~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 314 INIDF--TDPEE-SKWKVLVPEHEKDVLEWVACVR-SNFLVLCYLHD-VKNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp EEEET--TSCCG-GGCEEEECCCSSCEEEEEEEET-TTEEEEEEEET-TEEEEEEEETTTCCEEEEEC
T ss_pred EEEeC--CCCCc-ccceeccCCCCCCeEEEEEEEc-CCEEEEEEEEC-CEEEEEEEECCCCCEEEecC
Confidence 99998 33210 012455443 3 233456664 45677766553 34578999986676555554
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.46 E-value=8.3e-14 Score=131.10 Aligned_cols=206 Identities=14% Similarity=0.040 Sum_probs=120.3
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcE---E----------EEECCCCCCCChhhhHHHHhccCCCCC---
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGIL---V----------WKLDNRGTARRGLKFEASIKHNCGRID--- 413 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~---v----------~~~d~rG~~~~~~~~~~~~~~~~~~~~--- 413 (571)
|.||++||.+++.. .|..+++.|+++++. + +.+|.++.+............. ....
T Consensus 4 ~pvvllHG~~~~~~-------~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~-~~~~~~~ 75 (254)
T 3ds8_A 4 IPIILIHGSGGNAS-------SLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQ-NQATPDD 75 (254)
T ss_dssp CCEEEECCTTCCTT-------TTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESS-TTSCHHH
T ss_pred CCEEEECCCCCCcc-------hHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecC-CCCCHHH
Confidence 34668999776643 356678888887763 2 3333222111111000000000 0011
Q ss_pred -chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-----eeEEEEEcCccCCcccccchhhh-hhcCCCC
Q 008274 414 -AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-----VFQCAVSGAPVTSWDGYDTFYTE-KYMGLPS 486 (571)
Q Consensus 414 -~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~-~~~g~~~ 486 (571)
.+|+.++++.+.++. ..+++.++||||||.+++.++.++|+ +++++|+.++..+.......... ...+.|.
T Consensus 76 ~a~~l~~~i~~l~~~~--~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~p~ 153 (254)
T 3ds8_A 76 WSKWLKIAMEDLKSRY--GFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFKKLPN 153 (254)
T ss_dssp HHHHHHHHHHHHHHHH--CCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTCSSCSS
T ss_pred HHHHHHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccccccccccCCc
Confidence 345556667776653 23689999999999999999999988 89999998876553221100000 0111221
Q ss_pred CChhhhccCCcchhhccC--CCcEEEEecC------CCCCCChHHHHHHHHHHHHcCCCeeEEEcCC--CCCCCCCCCcH
Q 008274 487 EDPVGYEYSSVMHHVHKM--KGKLLLVHGM------IDENVHFRHTARLINALVAARKPYEILIFPD--ERHMPRRHRDR 556 (571)
Q Consensus 487 ~~~~~~~~~s~~~~~~~~--~~p~lli~G~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~~~~~~~~ 556 (571)
.. ..+... ......+ +.|+|+|+|+ .|..||...+..+...+.......+...+.+ ++|.... ++
T Consensus 154 ~~-~~~~~~--~~~~~~~~~~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~-~~- 228 (254)
T 3ds8_A 154 ST-PQMDYF--IKNQTEVSPDLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLH-ET- 228 (254)
T ss_dssp CC-HHHHHH--HHTGGGSCTTCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGG-GS-
T ss_pred ch-HHHHHH--HHHHhhCCCCcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhccc-CC-
Confidence 11 111110 1111222 5799999999 9999999999888776654434555666666 6798633 33
Q ss_pred HHHHHHHHHHHHHh
Q 008274 557 IYMEERIWEFIERT 570 (571)
Q Consensus 557 ~~~~~~i~~fl~~~ 570 (571)
.++.+.+..||++.
T Consensus 229 ~~v~~~i~~fL~~~ 242 (254)
T 3ds8_A 229 PKSIEKTYWFLEKF 242 (254)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHh
Confidence 35889999999864
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.45 E-value=1e-12 Score=122.10 Aligned_cols=207 Identities=16% Similarity=0.079 Sum_probs=127.3
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCc--EEEEECCCCCCCC--hhhhH----HHH----hccCCCC----C
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGI--LVWKLDNRGTARR--GLKFE----ASI----KHNCGRI----D 413 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~--~v~~~d~rG~~~~--~~~~~----~~~----~~~~~~~----~ 413 (571)
+.||++||..++.. .|..+++.|++.|+ .|+.+|.++.|.. .+... ... ..+.... .
T Consensus 7 ~pvvliHG~~~~~~-------~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~ 79 (249)
T 3fle_A 7 TATLFLHGYGGSER-------SETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKEN 79 (249)
T ss_dssp EEEEEECCTTCCGG-------GTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHH
T ss_pred CcEEEECCCCCChh-------HHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHH
Confidence 45677999766543 45667899999996 5888887765532 10000 000 0000011 1
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-----eeEEEEEcCccCCccc-ccchhhh-hh--cCC
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-----VFQCAVSGAPVTSWDG-YDTFYTE-KY--MGL 484 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-----~~~~~v~~~~~~~~~~-~~~~~~~-~~--~g~ 484 (571)
.+++.++++++.++. ..+++.++||||||.+++.++.++|. +++.+|..++..+-.. ....-.. ++ .+.
T Consensus 80 ~~~l~~~i~~l~~~~--~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~~g~ 157 (249)
T 3fle_A 80 AYWIKEVLSQLKSQF--GIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDKQGK 157 (249)
T ss_dssp HHHHHHHHHHHHHTT--CCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCTTCC
T ss_pred HHHHHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcccCC
Confidence 345677777777664 34689999999999999999998863 7888888776543211 0000000 11 122
Q ss_pred CCCChhhhccCCc-chhhccCCCcEEEEecC------CCCCCChHHHHHHHHHHHHcCCCeeEEEcCC--CCCCCCCCCc
Q 008274 485 PSEDPVGYEYSSV-MHHVHKMKGKLLLVHGM------IDENVHFRHTARLINALVAARKPYEILIFPD--ERHMPRRHRD 555 (571)
Q Consensus 485 ~~~~~~~~~~~s~-~~~~~~~~~p~lli~G~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--~~H~~~~~~~ 555 (571)
|......|...-. ...+.+.++|+|.|+|+ .|..||...+..+...++......+.+++.+ +.|.... +
T Consensus 158 p~~~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~-~- 235 (249)
T 3fle_A 158 PSRMNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLH-E- 235 (249)
T ss_dssp BSSCCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGG-G-
T ss_pred CcccCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccc-c-
Confidence 2221122222111 12233345799999998 7999999999888777766666667777765 8898743 3
Q ss_pred HHHHHHHHHHHH
Q 008274 556 RIYMEERIWEFI 567 (571)
Q Consensus 556 ~~~~~~~i~~fl 567 (571)
...+.+.|.+||
T Consensus 236 n~~V~~~I~~FL 247 (249)
T 3fle_A 236 NKDVANEIIQFL 247 (249)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 447888888887
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.45 E-value=4.1e-12 Score=139.22 Aligned_cols=214 Identities=12% Similarity=0.086 Sum_probs=137.6
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCC---ceEEEeccCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG---PVSWMDLQCGG 101 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~---~~~~~~~~~~~ 101 (571)
...+.|||||++|+|... . .|+++|++++ +.+.+.
T Consensus 111 v~~~~~SpDg~~l~~~~~---~----------------------------------~i~~~d~~~~~~~~~~~l~----- 148 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG---G----------------------------------ELYLYDLKQEGKAAVRQLT----- 148 (741)
T ss_dssp SCCCEECTTSSEEEEEET---T----------------------------------EEEEEESSSCSTTSCCBCC-----
T ss_pred cceeEECCCCCEEEEEeC---C----------------------------------cEEEEECCCCCcceEEEcc-----
Confidence 467899999999999653 1 5799999998 665542
Q ss_pred CCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCC-------eeeccCCcccCCCCCccC
Q 008274 102 TDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS-------WVNLHDCFTPLDKGVTKY 174 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~-------w~~~~~~~~~~~~~~~~~ 174 (571)
........+.|||||+.|++..++ .|+++|+++|+.++++...... |+.... +.. .....|+
T Consensus 149 ----~~~~~~~~~~~SPDG~~la~~~~~-----~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~-~~~-~~~~~~S 217 (741)
T 2ecf_A 149 ----HGEGFATDAKLSPKGGFVSFIRGR-----NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEE-MDR-HTGYWWA 217 (741)
T ss_dssp ----CSSSCEEEEEECTTSSEEEEEETT-----EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHH-SCC-CCSEEEC
T ss_pred ----cCCcccccccCCCCCCEEEEEeCC-----cEEEEecCCCCEEEeccCCccceeccccceeeeec-ccc-ccceEEC
Confidence 234567789999999999998643 5999999999888776532211 110000 000 0112466
Q ss_pred CCe--EEEEEecC------------------------------CccEEEEEeCCC-ceeeceeec---CeEEEEEEEEee
Q 008274 175 SGG--FIWASEKT------------------------------GFRHLYLHDING-TCLGPITEG---DWMVEQIVGVNE 218 (571)
Q Consensus 175 ~d~--~~~~s~~~------------------------------g~~~l~~~~~~~-~~~~~lT~~---~~~~~~~~~~s~ 218 (571)
+|+ +++.+... +..+|+++++++ ++.+.++.+ ...+..+ .| |
T Consensus 218 pDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~-p 295 (741)
T 2ecf_A 218 PDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARV-NW-R 295 (741)
T ss_dssp TTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEE-EE-E
T ss_pred CCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEE-Ee-C
Confidence 665 66654432 123899999988 877766532 3445555 49 9
Q ss_pred cCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC--Cc----eEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 219 ASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG--KG----KHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 219 dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~--~g----~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
||+.|++.+.........|+.+++ .+. ..+++... .+ ...+.|||||+ ++++.+. ..-..||.+++
T Consensus 296 Dg~~l~~~~~~~~~~~~~i~~~d~--~~g----~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~-~g~~~l~~~~~ 367 (741)
T 2ecf_A 296 DPQHLSFQRQSRDQKKLDLVEVTL--ASN----QQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSER-TGFQHLYRIDS 367 (741)
T ss_dssp ETTEEEEEEEETTSSEEEEEEEET--TTC----CEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECT-TSSCEEEEECS
T ss_pred CCCEEEEEEecccCCeEEEEEEEC--CCC----ceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecC-CCccEEEEEcC
Confidence 999999988644435689999998 332 33333321 11 12468999999 5555444 33458888876
Q ss_pred CCCceeEeccC
Q 008274 293 QDGSLVLPLYE 303 (571)
Q Consensus 293 ~~~~~~~~l~~ 303 (571)
. ++ .+.|+.
T Consensus 368 ~-~~-~~~l~~ 376 (741)
T 2ecf_A 368 K-GK-AAALTH 376 (741)
T ss_dssp S-SC-EEESCC
T ss_pred C-CC-eeeeee
Confidence 3 44 555654
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=4.2e-13 Score=134.67 Aligned_cols=224 Identities=11% Similarity=-0.018 Sum_probs=139.7
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh------CCcEEEEECCC
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS------KGILVWKLDNR 392 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~------~G~~v~~~d~r 392 (571)
...+.+.. +|..|++....+.. ...|.||++||.+++.. .|...+..|++ .||.|+++|+|
T Consensus 85 ~~~~~~~i-~g~~i~~~~~~~~~-----~~~~pllllHG~~~s~~-------~~~~~~~~L~~~~~~~~~gf~vv~~Dlp 151 (408)
T 3g02_A 85 FPQFTTEI-EGLTIHFAALFSER-----EDAVPIALLHGWPGSFV-------EFYPILQLFREEYTPETLPFHLVVPSLP 151 (408)
T ss_dssp SCEEEEEE-TTEEEEEEEECCSC-----TTCEEEEEECCSSCCGG-------GGHHHHHHHHHHCCTTTCCEEEEEECCT
T ss_pred CCCEEEEE-CCEEEEEEEecCCC-----CCCCeEEEECCCCCcHH-------HHHHHHHHHhcccccccCceEEEEECCC
Confidence 34455554 88899988887643 23467888999888743 34556677776 69999999999
Q ss_pred CCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCC-cEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc
Q 008274 393 GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVG-HIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 471 (571)
Q Consensus 393 G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~-~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~ 471 (571)
|+|.+.... ........++.+.+..+.+.- ..+ ++.++|||+||.+++.++.++|+++...+...++....
T Consensus 152 G~G~S~~~~------~~~~~~~~~~a~~~~~l~~~l--g~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~ 223 (408)
T 3g02_A 152 GYTFSSGPP------LDKDFGLMDNARVVDQLMKDL--GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPP 223 (408)
T ss_dssp TSTTSCCSC------SSSCCCHHHHHHHHHHHHHHT--TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCT
T ss_pred CCCCCCCCC------CCCCCCHHHHHHHHHHHHHHh--CCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCc
Confidence 999876421 011233566666666665542 334 89999999999999999999988776666554433210
Q ss_pred ------cccc----------hh---------------------------------hhhhc--CCCCCChh----------
Q 008274 472 ------GYDT----------FY---------------------------------TEKYM--GLPSEDPV---------- 490 (571)
Q Consensus 472 ------~~~~----------~~---------------------------------~~~~~--g~~~~~~~---------- 490 (571)
.+.. .+ .+.+. .......+
T Consensus 224 ~~~~~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y~ 303 (408)
T 3g02_A 224 EGPSIESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYW 303 (408)
T ss_dssp TCCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHH
T ss_pred ccccccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHHH
Confidence 0000 00 00000 00000000
Q ss_pred ----------hhccC-C--cc-------hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 491 ----------GYEYS-S--VM-------HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 491 ----------~~~~~-s--~~-------~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
.|.+. . .. ..+.++++|+++++|..|...++.. +.+.. ...+.+.+++++||..
T Consensus 304 ~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~~---~~~~~---~~~~~~~~~~~gGHf~ 377 (408)
T 3g02_A 304 LTESFPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPRS---WIATT---GNLVFFRDHAEGGHFA 377 (408)
T ss_dssp HTTHHHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCCCHH---HHGGG---EEEEEEEECSSCBSCH
T ss_pred hhccchhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccCcHH---HHHhc---CCeeEEEECCCCcCch
Confidence 01000 0 00 0234567899999999997666542 22222 2337788999999987
Q ss_pred CCCCcHHHHHHHHHHHHHHh
Q 008274 551 RRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 551 ~~~~~~~~~~~~i~~fl~~~ 570 (571)
..+..+.+.+.|.+||.+.
T Consensus 378 -~lE~Pe~~~~~l~~fl~~~ 396 (408)
T 3g02_A 378 -ALERPRELKTDLTAFVEQV 396 (408)
T ss_dssp -HHHCHHHHHHHHHHHHHHH
T ss_pred -hhhCHHHHHHHHHHHHHHH
Confidence 5578899999999999763
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.45 E-value=2.6e-12 Score=138.81 Aligned_cols=193 Identities=9% Similarity=-0.032 Sum_probs=125.7
Q ss_pred EEEEEECC--C-CceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc------CccEEEEEEECCC------Cc
Q 008274 81 RLGVVSAA--G-GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS------QTKLKVLKFDIKT------GQ 145 (571)
Q Consensus 81 ~l~~~dl~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~------~~~~~i~~~d~~~------g~ 145 (571)
+||+++++ + ++.++++.... .........++|||||+.|++.+.+. .....|+++|+++ |+
T Consensus 103 ~l~~~~~~~~g~~~~~~l~~~~~----~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (662)
T 3azo_A 103 RLYAFEPDAPGGAVPRPLTPVSA----VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA 178 (662)
T ss_dssp CEEEECTTSTTCCCCEECSCCCC----STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred eEEEEcCCCCCCCCCEeccCCcc----CCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence 47899988 5 77776633100 00234677899999999988887652 3346899999999 88
Q ss_pred eEEEE-EeecCCeeeccCCcccCCCCCccCCCe--EEEEEecC-----CccEEEEEeCC-Cc---eeeceeec-CeEEEE
Q 008274 146 RKVIL-VEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASEKT-----GFRHLYLHDIN-GT---CLGPITEG-DWMVEQ 212 (571)
Q Consensus 146 ~~~l~-~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~~~-----g~~~l~~~~~~-~~---~~~~lT~~-~~~~~~ 212 (571)
.++|+ ... .+. .. +.|++|+ +++.+... +..+||+++++ ++ +.++|+.+ ...+..
T Consensus 179 ~~~l~~~~~--~~~-~~---------~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~ 246 (662)
T 3azo_A 179 VRELSDDAH--RFV-TG---------PRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQ 246 (662)
T ss_dssp SEESSCSCS--SEE-CC---------CEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEE
T ss_pred eeEEEecCC--Ccc-cC---------ceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcc
Confidence 77775 221 111 11 1355665 66665443 23689999998 46 67788765 445555
Q ss_pred EEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc----------eEEEEECCCCCEEEEEeeCCC
Q 008274 213 IVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG----------KHVAVLDHNMRNFVDFHDSLD 282 (571)
Q Consensus 213 ~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g----------~~~~~~s~~g~~~v~~~s~~~ 282 (571)
+ .|+|||+ ++|+++.++. .+||++++ ++. ..++++.... ...+.++++++ ++++.+.
T Consensus 247 ~-~~spdg~-l~~~~~~~~~--~~l~~~~~--~~~----~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-- 313 (662)
T 3azo_A 247 A-EWAPDGS-LIVATDRTGW--WNLHRVDP--ATG----AATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-- 313 (662)
T ss_dssp E-EECTTSC-EEEEECTTSS--CEEEEECT--TTC----CEEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS--
T ss_pred e-EECCCCe-EEEEECCCCC--eEEEEEEC--CCC----ceeecccccccccCccccccCceEeEeCCCE-EEEEEEc--
Confidence 5 4999999 8899887764 68999987 333 4556654321 12457778876 5555555
Q ss_pred CCCEEEEEEcCCCceeEeccC
Q 008274 283 SPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 283 ~p~~l~~~~~~~~~~~~~l~~ 303 (571)
.-..|+++++.+++ ++.|..
T Consensus 314 ~~~~l~~~d~~~~~-~~~l~~ 333 (662)
T 3azo_A 314 GAAVLGILDPESGE-LVDAAG 333 (662)
T ss_dssp SSCEEEEEETTTTE-EEECCS
T ss_pred CccEEEEEECCCCc-EEEecC
Confidence 45689999985554 566654
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=99.42 E-value=7.8e-12 Score=119.59 Aligned_cols=212 Identities=14% Similarity=0.131 Sum_probs=127.0
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECC--------CCCCCChhhh
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDN--------RGTARRGLKF 401 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~--------rG~~~~~~~~ 401 (571)
..+.+.++.|.+. .++.|+||.+||+.. ...+||+|+.+++ +|+.++|. |
T Consensus 90 ~~~~~~i~lP~~~---~~p~Pvii~i~~~~~------------------~~~~G~a~~~~~~~~v~~~~~~gs~g~g~-f 147 (375)
T 3pic_A 90 ISFTVTITYPSSG---TAPYPAIIGYGGGSL------------------PAPAGVAMINFNNDNIAAQVNTGSRGQGK-F 147 (375)
T ss_dssp EEEEEEEECCSSS---CSSEEEEEEETTCSS------------------CCCTTCEEEEECHHHHSCCSSGGGTTCSH-H
T ss_pred eEEEEEEECCCCC---CCCccEEEEECCCcc------------------ccCCCeEEEEecccccccccCCCCcccee-c
Confidence 4588899999763 268999999998411 1357999999986 44444453 3
Q ss_pred HHHHhc---cCCCCC--chhHHHHHHHHHHcC--CCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC----c
Q 008274 402 EASIKH---NCGRID--AEDQLTGAEWLIKQG--LAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS----W 470 (571)
Q Consensus 402 ~~~~~~---~~~~~~--~~D~~~~~~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~----~ 470 (571)
.. .+. .+|... .-++..+++||.+++ .+|++||+|+|||+||..++++++.. ++|+++|+..+..+ +
T Consensus 148 ~~-ly~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~~G~~~~ 225 (375)
T 3pic_A 148 YD-LYGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGAGGSACW 225 (375)
T ss_dssp HH-HHCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCTTTTSCH
T ss_pred cc-ccCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCCCchhhh
Confidence 32 222 222211 237899999999998 89999999999999999999999975 58899998765432 2
Q ss_pred cccc--chhhhh------hcC-CCCCChhhhccC---------CcchhhccCC-CcEEEEecCCCCCCChHHHHHHHHH-
Q 008274 471 DGYD--TFYTEK------YMG-LPSEDPVGYEYS---------SVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINA- 530 (571)
Q Consensus 471 ~~~~--~~~~~~------~~g-~~~~~~~~~~~~---------s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~- 530 (571)
+... ..+.+. ..+ ..+... .|..+ +....+.-+. .|+|++.| .|..+++......+.+
T Consensus 226 R~~~~~~~~Ge~v~~~~~~~~e~~Wf~~-~~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~~~g~~~~~~~a 303 (375)
T 3pic_A 226 RISDYLKSQGANIQTASEIIGEDPWFST-TFNSYVNQVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLGPQSCFGCMTAA 303 (375)
T ss_dssp HHHHHHHHTTCCCCCHHHHTTTCSCSCG-GGGGTTTCGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGCHHHHHHHHHHH
T ss_pred hhhhhhcccCccccccccccCccccccc-chhhhcccccccCcCHHHHHHHhCCceEEEecC-CCcccCcHHHHHHHHHH
Confidence 1100 000000 001 111111 11111 1112233333 58999999 9999988755433333
Q ss_pred ---HHHcCC--CeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 531 ---LVAARK--PYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 531 ---l~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.+..|+ ++.+.+..+.+|.....+. .+.+.+||+++|
T Consensus 304 ~~VY~~lG~~d~~~~~~~ggH~Hc~fp~~~----~~~~~~F~~k~L 345 (375)
T 3pic_A 304 HMAWQALGVSDHMGYSQIGAHAHCAFPSNQ----QSQLTAFVQKFL 345 (375)
T ss_dssp HHHHHHTTCGGGEEEECCSCCSTTCCCGGG----HHHHHHHHHHHT
T ss_pred HHHHHHcCCccceEEEeeCCCccccCCHHH----HHHHHHHHHHHh
Confidence 344564 5555443333453212222 256777777775
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.2e-13 Score=131.75 Aligned_cols=200 Identities=12% Similarity=0.005 Sum_probs=119.8
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHH-HHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAE-WLI 425 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~l~ 425 (571)
...|.||++||.++.... ..|..++..|. .+|.|+.+|+||+|.+... ...++++.+.+. .+.
T Consensus 65 ~~~~~lvllhG~~~~~~~-----~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~----------~~~~~~~a~~~~~~l~ 128 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGP-----HEFTRLAGALR-GIAPVRAVPQPGYEEGEPL----------PSSMAAVAAVQADAVI 128 (300)
T ss_dssp SCSSEEEECCCSSTTCST-----TTTHHHHHHTS-SSCCBCCCCCTTSSTTCCB----------CSSHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcccCcH-----HHHHHHHHhcC-CCceEEEecCCCCCCCCCC----------CCCHHHHHHHHHHHHH
Confidence 345789999997765310 12344455554 4699999999998865321 112444443333 343
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCC---CeeEEEEEcCccCCccc-c-cch---hhhhhcCCCC--CCh------
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPVTSWDG-Y-DTF---YTEKYMGLPS--EDP------ 489 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~---~~~~~~v~~~~~~~~~~-~-~~~---~~~~~~g~~~--~~~------ 489 (571)
+.. +..++.|+|||+||.+++.++.++| ++++++|+.++...... . ..+ ....++..+. ...
T Consensus 129 ~~~--~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (300)
T 1kez_A 129 RTQ--GDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTAL 206 (300)
T ss_dssp HHC--SSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHHHHH
T ss_pred Hhc--CCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHHHHH
Confidence 332 4568999999999999999999987 48899998887654321 0 000 0111111110 000
Q ss_pred hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 490 VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 490 ~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
..+..........++++|+|+++|+ |..+++.. ..+.+. ...+.+++++++ +|.....++...+.+.+.+||.+
T Consensus 207 ~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~---~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~fl~~ 280 (300)
T 1kez_A 207 GAYDRLTGQWRPRETGLPTLLVSAG-EPMGPWPD-DSWKPT---WPFEHDTVAVPG-DHFTMVQEHADAIARHIDAWLGG 280 (300)
T ss_dssp HHHHHHTTTCCCCCCSCCBEEEEES-SCSSCCCS-SCCSCC---CSSCCEEEEESS-CTTTSSSSCSHHHHHHHHHHHTC
T ss_pred HHHHHHHhcCCCCCCCCCEEEEEeC-CCCCCCcc-cchhhh---cCCCCeEEEecC-CChhhccccHHHHHHHHHHHHHh
Confidence 0010000001236678999999995 66666544 222111 123579999999 99875336778899999999975
Q ss_pred h
Q 008274 570 T 570 (571)
Q Consensus 570 ~ 570 (571)
.
T Consensus 281 ~ 281 (300)
T 1kez_A 281 G 281 (300)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=5.7e-12 Score=137.54 Aligned_cols=244 Identities=10% Similarity=0.012 Sum_probs=144.5
Q ss_pred eeeeecccceeeeeccC---CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEE
Q 008274 7 VLQTHGLAEYIAQEEMD---RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 83 (571)
Q Consensus 7 ~~~~~g~~~~~~~~~~~---~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 83 (571)
+++-+|...-+....-. ....+.|||||++|||....... + ++ .....|+
T Consensus 41 ~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~--------------~-------~~------s~~~~i~ 93 (719)
T 1z68_A 41 YNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKL--------------W-------RY------SYTATYY 93 (719)
T ss_dssp EESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEEC--------------S-------SS------CEEEEEE
T ss_pred EEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCcee--------------E-------Ee------ecceEEE
Confidence 44455555444432211 25689999999999997654211 0 00 0123689
Q ss_pred EEECCCCce---EEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCe-ee
Q 008274 84 VVSAAGGPV---SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW-VN 159 (571)
Q Consensus 84 ~~dl~~~~~---~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w-~~ 159 (571)
++|+++++. +.+ . ..+..++|||||+.|++..++ .|+++|+++|+.++|+....... .+
T Consensus 94 ~~d~~~g~~~~~~~l---------~---~~~~~~~~SPDG~~la~~~~~-----~i~~~~~~~g~~~~l~~~~~~~~v~~ 156 (719)
T 1z68_A 94 IYDLSNGEFVRGNEL---------P---RPIQYLCWSPVGSKLAYVYQN-----NIYLKQRPGDPPFQITFNGRENKIFN 156 (719)
T ss_dssp EEETTTTEECCSSCC---------C---SSBCCEEECSSTTCEEEEETT-----EEEEESSTTSCCEECCCCCBTTTEEE
T ss_pred EEECCCCccccceec---------C---cccccceECCCCCEEEEEECC-----eEEEEeCCCCCcEEEecCCCcCCeEc
Confidence 999999976 333 1 234568999999999988532 59999999999887764322110 00
Q ss_pred ccCCcc------cCCCCCccCCCe--EEEEEecC-C------------------------------ccEEEEEeCCCcee
Q 008274 160 LHDCFT------PLDKGVTKYSGG--FIWASEKT-G------------------------------FRHLYLHDINGTCL 200 (571)
Q Consensus 160 ~~~~~~------~~~~~~~~~~d~--~~~~s~~~-g------------------------------~~~l~~~~~~~~~~ 200 (571)
..+.+. .....+.|+||+ +++.+.++ + ...|+++++++++.
T Consensus 157 g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~ 236 (719)
T 1z68_A 157 GIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAY 236 (719)
T ss_dssp SSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHH
T ss_pred ccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCc
Confidence 000000 000123567776 66665442 1 23788999988764
Q ss_pred e---cee------ecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE----eCCCCCCCCCCCeEec-----CCCc-
Q 008274 201 G---PIT------EGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK----LYPDWNHTLEAPVKLT-----NGKG- 261 (571)
Q Consensus 201 ~---~lT------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~----l~~~g~~~~~~~~~lt-----~~~g- 261 (571)
. +++ .....+..+ .||||++.++...++.. ....|+.++ + .+. +.+.++ ...+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~-~~SpD~~~~~~~~~~~~-~~~~l~~~d~~~~~--~~g----~~~~~~~~~~~~~~~~ 308 (719)
T 1z68_A 237 VGPQEVPVPAMIASSDYYFSWL-TWVTDERVCLQWLKRVQ-NVSVLSICDFREDW--QTW----DCPKTQEHIEESRTGW 308 (719)
T ss_dssp HCCEECCCCHHHHTSCEEEEEE-EESSSSEEEEEEEESST-TEEEEEEEEECSSS--SSE----ECCGGGEEEEECSSSC
T ss_pred cceeEccCCccCCCCcceEEEe-EEeCCCeEEEEEecccc-CeEEEEEEcccCCC--CCC----ceEEEEecccccCCce
Confidence 2 332 234445555 49999765544444433 357899999 5 222 223333 1122
Q ss_pred eE-----EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 262 KH-----VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 262 ~~-----~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
.. .+.|||||+.+++..+....-..|+++++.+++ .+.|+.
T Consensus 309 ~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~ 354 (719)
T 1z68_A 309 AGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS 354 (719)
T ss_dssp SSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSC
T ss_pred EccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEeccc
Confidence 12 468999999988876665566789998885554 456654
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.8e-13 Score=128.52 Aligned_cols=197 Identities=13% Similarity=0.062 Sum_probs=113.9
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|.||++||++++.. . |..++. | ..+|.|+.+|+||.+.+... ...+.++.+.+..++..
T Consensus 20 ~~~~lv~lhg~~~~~~---~----~~~~~~-l-~~~~~v~~~d~~G~~~~~~~----------~~~~~~~~~~~~~~i~~ 80 (265)
T 3ils_A 20 ARKTLFMLPDGGGSAF---S----YASLPR-L-KSDTAVVGLNCPYARDPENM----------NCTHGAMIESFCNEIRR 80 (265)
T ss_dssp SSEEEEEECCTTCCGG---G----GTTSCC-C-SSSEEEEEEECTTTTCGGGC----------CCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHH---H----HHHHHh-c-CCCCEEEEEECCCCCCCCCC----------CCCHHHHHHHHHHHHHH
Confidence 4577889999877643 2 333455 4 67899999999997432211 11233333333222222
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHh---cCCCeeEEEEEcCccCCccc--cc---chhhhh---hcCCC-------CCCh
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLA---RFPDVFQCAVSGAPVTSWDG--YD---TFYTEK---YMGLP-------SEDP 489 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~---~~~~~~~~~v~~~~~~~~~~--~~---~~~~~~---~~g~~-------~~~~ 489 (571)
- ....++.++||||||.++..++. .++++++.++..++...... .. ..+.+. +.+.+ .+..
T Consensus 81 ~-~~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (265)
T 3ils_A 81 R-QPRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPP 159 (265)
T ss_dssp H-CSSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSCSCCC
T ss_pred h-CCCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCCHHHH
Confidence 1 12358999999999999999987 67888888888765432111 00 011111 11110 0000
Q ss_pred hh--------h---ccCCcchhhccCCCcEE-EEecCC---CCCCC--------------hHHHHHHHHHHHHcCCCeeE
Q 008274 490 VG--------Y---EYSSVMHHVHKMKGKLL-LVHGMI---DENVH--------------FRHTARLINALVAARKPYEI 540 (571)
Q Consensus 490 ~~--------~---~~~s~~~~~~~~~~p~l-li~G~~---D~~v~--------------~~~~~~~~~~l~~~~~~~~~ 540 (571)
+. + ....+ .....+++|++ +++|++ |..++ ......+.+.+ .+.++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~--~~~~~~~ 236 (265)
T 3ils_A 160 SYLIPHFTAVVDVMLDYKL-APLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIM--PGASFDI 236 (265)
T ss_dssp TTHHHHHHHHHHHTTTCCC-CCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHS--TTCCEEE
T ss_pred HHHHHHHHHHHHHHHhcCC-CCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhC--CccceeE
Confidence 00 0 01111 11236788977 999999 98873 32223333322 1147899
Q ss_pred EEcCCCCCCCC-CCCcHHHHHHHHHHHH
Q 008274 541 LIFPDERHMPR-RHRDRIYMEERIWEFI 567 (571)
Q Consensus 541 ~~~~~~~H~~~-~~~~~~~~~~~i~~fl 567 (571)
+++|++||.+. ..++...+.+.|.+||
T Consensus 237 ~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 237 VRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp EEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred EEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 99999999873 2566777777777776
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2e-12 Score=125.21 Aligned_cols=209 Identities=13% Similarity=0.021 Sum_probs=123.0
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccch-hhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhcc
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVD-MRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHN 408 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~ 408 (571)
..+...++.|.... ....+.||++||..++.. . .|. .+++.|.++||.|+.+|+||++..... .
T Consensus 14 ~~l~~~i~~p~~~~--~~~~~~VvllHG~~~~~~---~---~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~~---~---- 78 (317)
T 1tca_A 14 SVLDAGLTCQGASP--SSVSKPILLVPGTGTTGP---Q---SFDSNWIPLSTQLGYTPCWISPPPFMLNDTQ---V---- 78 (317)
T ss_dssp HHHHHTEEETTBCT--TSCSSEEEEECCTTCCHH---H---HHTTTHHHHHHTTTCEEEEECCTTTTCSCHH---H----
T ss_pred HHHhheeeCCCCCC--CCCCCeEEEECCCCCCcc---h---hhHHHHHHHHHhCCCEEEEECCCCCCCCcHH---H----
Confidence 34555567776532 123456788999776532 1 123 467889999999999999998654311 0
Q ss_pred CCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC---CeeEEEEEcCccCCcccccchhhhhhcCCC
Q 008274 409 CGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPVTSWDGYDTFYTEKYMGLP 485 (571)
Q Consensus 409 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~ 485 (571)
..+++.+.++.+.++. ..+++.|+||||||.++..++..+| ++++++|+.+|............ . ++.
T Consensus 79 ----~~~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~-~-~~~- 149 (317)
T 1tca_A 79 ----NTEYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLD-A-LAV- 149 (317)
T ss_dssp ----HHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHH-H-TTC-
T ss_pred ----HHHHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhh-h-hhh-
Confidence 1456777777777653 3478999999999999998887765 78999999888654322111100 0 000
Q ss_pred CCChh--hhccCCc-chhhc-----cCCCcEEEEecCCCCCCChHH--HHHHHHHHHHcCCCeeEEEc-------CCCCC
Q 008274 486 SEDPV--GYEYSSV-MHHVH-----KMKGKLLLVHGMIDENVHFRH--TARLINALVAARKPYEILIF-------PDERH 548 (571)
Q Consensus 486 ~~~~~--~~~~~s~-~~~~~-----~~~~p~lli~G~~D~~v~~~~--~~~~~~~l~~~~~~~~~~~~-------~~~~H 548 (571)
.... .....+. +..+. ....|+++++|+.|.+|++.. +......+. + .+.... ++.+|
T Consensus 150 -~~~~~~~~~~~s~f~~~L~~~~~~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~--~--a~~~~~~~~~~~~~~~gH 224 (317)
T 1tca_A 150 -SAPSVWQQTTGSALTTALRNAGGLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLF--N--GKNVQAQAVCGPLFVIDH 224 (317)
T ss_dssp -BCHHHHHTBTTCHHHHHHHHTTTTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCB--T--SEEEEHHHHHCTTCCCCT
T ss_pred -cCchHHhhCcCcHHHHHHHhcCCCCCCCCEEEEEeCCCCeECCccccccchhhhcc--C--CccEEeeeccCCCCccCc
Confidence 0000 0000000 01111 135799999999999998765 211111121 1 122222 57899
Q ss_pred CCCCCCcHHHHHHHHHHHHHH
Q 008274 549 MPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 549 ~~~~~~~~~~~~~~i~~fl~~ 569 (571)
... ..+. ..+..+++||+.
T Consensus 225 ~~~-l~~p-~~~~~v~~~L~~ 243 (317)
T 1tca_A 225 AGS-LTSQ-FSYVVGRSALRS 243 (317)
T ss_dssp THH-HHBH-HHHHHHHHHHHC
T ss_pred ccc-cCCH-HHHHHHHHHhcC
Confidence 752 2233 356788888874
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.9e-12 Score=118.18 Aligned_cols=197 Identities=14% Similarity=0.083 Sum_probs=118.5
Q ss_pred EEEEEcCCCCceeecccccccchhhhHHHHhCC---cEEEEECCCCCCC--ChhhhH----HHH----hccC-C-----C
Q 008274 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG---ILVWKLDNRGTAR--RGLKFE----ASI----KHNC-G-----R 411 (571)
Q Consensus 351 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G---~~v~~~d~rG~~~--~~~~~~----~~~----~~~~-~-----~ 411 (571)
.||++||..++.. .|..++..|++.| +.|+.+|.++.|. ..+.+. ... ..+. . .
T Consensus 6 pvv~iHG~~~~~~-------~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~ 78 (250)
T 3lp5_A 6 PVIMVPGSSASQN-------RFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANID 78 (250)
T ss_dssp CEEEECCCGGGHH-------HHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHH
T ss_pred CEEEECCCCCCHH-------HHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHH
Confidence 3566999766543 4566788898876 6677665554442 111100 000 0000 0 0
Q ss_pred CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC-----CCeeEEEEEcCccCCcccccchhhhhhcCCCC
Q 008274 412 IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF-----PDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPS 486 (571)
Q Consensus 412 ~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~ 486 (571)
...+++.++++.+.++. ...++.++||||||.++..++.++ +++++.+|..++..+-.... +.
T Consensus 79 ~~a~~l~~~~~~l~~~~--~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~----------~~ 146 (250)
T 3lp5_A 79 KQAVWLNTAFKALVKTY--HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS----------TT 146 (250)
T ss_dssp HHHHHHHHHHHHHHTTS--CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC----------SS
T ss_pred HHHHHHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc----------cc
Confidence 01366777777777654 447899999999999999998876 67889888877654321110 00
Q ss_pred CChhhhccC-CcchhhccCCCcEEEEecC----CCCCCChHHHHHHHHHHHHcCCCeeEEEcC--CCCCCCCCCCcHHHH
Q 008274 487 EDPVGYEYS-SVMHHVHKMKGKLLLVHGM----IDENVHFRHTARLINALVAARKPYEILIFP--DERHMPRRHRDRIYM 559 (571)
Q Consensus 487 ~~~~~~~~~-s~~~~~~~~~~p~lli~G~----~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~--~~~H~~~~~~~~~~~ 559 (571)
.....|... .....+.+ +.|+|+|+|+ .|..||...+..+...+.......+.+.+. +++|.... ++ ..+
T Consensus 147 ~~~~~~~~l~~~~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~-e~-~~v 223 (250)
T 3lp5_A 147 AKTSMFKELYRYRTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLP-QN-KQI 223 (250)
T ss_dssp CCCHHHHHHHHTGGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHH-HH-HHH
T ss_pred ccCHHHHHHHhccccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcch-hC-HHH
Confidence 001111100 00011222 5799999999 999999998888777665433444444554 56798733 33 378
Q ss_pred HHHHHHHHHH
Q 008274 560 EERIWEFIER 569 (571)
Q Consensus 560 ~~~i~~fl~~ 569 (571)
.+.|.+||.+
T Consensus 224 ~~~I~~FL~~ 233 (250)
T 3lp5_A 224 VSLIRQYLLA 233 (250)
T ss_dssp HHHHHHHTSC
T ss_pred HHHHHHHHhc
Confidence 8999999853
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=122.02 Aligned_cols=195 Identities=15% Similarity=0.178 Sum_probs=113.7
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
+.|.||++||.+++.. .|..++..|. .+|.|+++|+||+|.+... ...|+.+.++.+.+.
T Consensus 12 ~~~~lv~lhg~g~~~~-------~~~~~~~~L~-~~~~vi~~Dl~GhG~S~~~------------~~~~~~~~~~~~~~~ 71 (242)
T 2k2q_B 12 EKTQLICFPFAGGYSA-------SFRPLHAFLQ-GECEMLAAEPPGHGTNQTS------------AIEDLEELTDLYKQE 71 (242)
T ss_dssp CCCEEESSCCCCHHHH-------HHHHHHHHHC-CSCCCEEEECCSSCCSCCC------------TTTHHHHHHHHTTTT
T ss_pred CCceEEEECCCCCCHH-------HHHHHHHhCC-CCeEEEEEeCCCCCCCCCC------------CcCCHHHHHHHHHHH
Confidence 4467888999766543 3455566665 4799999999999877421 145677777666543
Q ss_pred CCC-cCCcEEEEeechHHHHHHHHHhc------CCCeeEEEEEcCccCCccc---c-cchhhhhhc---CCCCCC---hh
Q 008274 428 GLA-KVGHIGLYGWSYGGYLSAITLAR------FPDVFQCAVSGAPVTSWDG---Y-DTFYTEKYM---GLPSED---PV 490 (571)
Q Consensus 428 ~~~-d~~~i~l~G~S~GG~~a~~~~~~------~~~~~~~~v~~~~~~~~~~---~-~~~~~~~~~---g~~~~~---~~ 490 (571)
-.+ ...++.++||||||.+|+.++.+ +|+++-......|...... . ...+...+. +.+... .+
T Consensus 72 l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (242)
T 2k2q_B 72 LNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKE 151 (242)
T ss_dssp CCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTTHHHH
T ss_pred HHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHhcCHH
Confidence 212 23689999999999999999876 5775421111112111000 0 000111110 111110 00
Q ss_pred -----------hh---ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcH
Q 008274 491 -----------GY---EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR 556 (571)
Q Consensus 491 -----------~~---~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 556 (571)
.+ ..... ..+.++++|+|+++|++|..++ ..... +.+.-...+++++++ ||.+ ..++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~G~~D~~~~-~~~~~----~~~~~~~~~~~~~~~-gH~~-~~e~p 223 (242)
T 2k2q_B 152 VMSFFLPSFRSDYRALEQFEL-YDLAQIQSPVHVFNGLDDKKCI-RDAEG----WKKWAKDITFHQFDG-GHMF-LLSQT 223 (242)
T ss_dssp TTTTCCSCHHHHHHHHTCCCC-SCCTTCCCSEEEEEECSSCCHH-HHHHH----HHTTCCCSEEEEEEC-CCSH-HHHHC
T ss_pred HHHHHHHHHHHHHHHHHhccc-CCCCccCCCEEEEeeCCCCcCH-HHHHH----HHHHhcCCeEEEEeC-Ccee-EcCCH
Confidence 00 00111 1145688999999999998754 22222 333333455778875 9976 34556
Q ss_pred HHHHHHHHHHHHHh
Q 008274 557 IYMEERIWEFIERT 570 (571)
Q Consensus 557 ~~~~~~i~~fl~~~ 570 (571)
+.+.+.+.+||++.
T Consensus 224 ~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 224 EEVAERIFAILNQH 237 (242)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhcc
Confidence 78899999999763
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=4e-11 Score=115.86 Aligned_cols=212 Identities=14% Similarity=0.090 Sum_probs=126.1
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECC--------CCCCCChhhh
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDN--------RGTARRGLKF 401 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~--------rG~~~~~~~~ 401 (571)
..+.+.++.|.+. ++.|+||.+||+. + ....||+++.+|+ +|+.++|. |
T Consensus 123 ~sf~~~i~lP~g~----~P~Pvii~~~~~~--------~----------~~~~G~A~i~f~~~~va~d~~~gsrG~g~-f 179 (433)
T 4g4g_A 123 ISFSASIRKPSGA----GPFPAIIGIGGAS--------I----------PIPSNVATITFNNDEFGAQMGSGSRGQGK-F 179 (433)
T ss_dssp EEEEEEEECCSSS----CCEEEEEEESCCC--------S----------CCCTTSEEEEECHHHHSCCSSGGGTTCSH-H
T ss_pred EEEEEEEECCCCC----CCccEEEEECCCc--------c----------ccCCCeEEEEeCCcccccccCCCcCCccc-c
Confidence 3468999999763 7899999998731 1 1357999999987 33444444 3
Q ss_pred HHHHhc---cCCCCC--chhHHHHHHHHHH----cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC---
Q 008274 402 EASIKH---NCGRID--AEDQLTGAEWLIK----QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS--- 469 (571)
Q Consensus 402 ~~~~~~---~~~~~~--~~D~~~~~~~l~~----~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~--- 469 (571)
.. ++. .++... .-++..+++||.. ++.+|++||+++|||+||..++++++.. ++|+++|+..+..+
T Consensus 180 ~~-ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~~G~~ 257 (433)
T 4g4g_A 180 YD-LFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGAGGAA 257 (433)
T ss_dssp HH-HHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCTTTTS
T ss_pred cc-ccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCCCchh
Confidence 32 222 222111 2378889999999 8899999999999999999999999975 58899998776433
Q ss_pred -ccccc--chhhh------hhcC-CCCCCh--hhhcc------CCcchhhccCC-CcEEEEecCCCCCCChHHHHHHHHH
Q 008274 470 -WDGYD--TFYTE------KYMG-LPSEDP--VGYEY------SSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINA 530 (571)
Q Consensus 470 -~~~~~--~~~~~------~~~g-~~~~~~--~~~~~------~s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~ 530 (571)
++... ..+.+ ...+ ..+... ..|.. .+....+.-+- .|+|++.| +|..+++......+.+
T Consensus 258 ~~R~~~~~~~~Ge~v~~~~~~~ge~~Wf~~~f~~y~~~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~p~g~~~a~~a 336 (433)
T 4g4g_A 258 CWRISDQQKAAGANIQTAAQIITENPWFSRNFDPHVNSITSVPQDHHLLAALIVPRGLAVFEN-NIDWLGPVSTTGCMAA 336 (433)
T ss_dssp CHHHHHHHHHTTCCCCCHHHHTTTCCCSCTTTGGGTTCGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTCHHHHHHHHHH
T ss_pred hhhhchhhcccCcchhhhhcccCCccccchhhHhhccccccCCcCHHHHHHhhCCceEEEecC-CCCcCCcHHHHHHHHH
Confidence 22100 00000 0001 111111 11110 01111222233 58999999 8988887655433333
Q ss_pred H----HHcCC--CeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 531 L----VAARK--PYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 531 l----~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+ +..|. ++.+...++.+|.....+. .+.+.+||+++|
T Consensus 337 a~~VY~~lGa~d~l~~~~~ggH~Hc~fp~~~----r~~~~~F~~k~L 379 (433)
T 4g4g_A 337 GRLIYKAYGVPNNMGFSLVGGHNHCQFPSSQ----NQDLNSYINYFL 379 (433)
T ss_dssp HHHHHHHHTCGGGEEEEECCSSCTTCCCGGG----HHHHHHHHHHHT
T ss_pred HHHHHHHcCCccceEEEeeCCCCcccCCHHH----HHHHHHHHHHHh
Confidence 2 33454 6666555555664322222 355677777765
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.5e-11 Score=139.84 Aligned_cols=230 Identities=10% Similarity=0.067 Sum_probs=143.7
Q ss_pred eeeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEE
Q 008274 7 VLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 86 (571)
Q Consensus 7 ~~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 86 (571)
+++-+|.+.-+... -.....+.|||||++|||++.+... .....|+++|
T Consensus 38 ~~~~gg~~~~lt~~-~~~v~~~~~SPDG~~la~~s~~~~~------------------------------~~~~~i~~~d 86 (1045)
T 1k32_A 38 HDLKSGSTRKIVSN-LGVINNARFFPDGRKIAIRVMRGSS------------------------------LNTADLYFYN 86 (1045)
T ss_dssp EETTTCCEEEEECS-SSEEEEEEECTTSSEEEEEEEESTT------------------------------CCEEEEEEEE
T ss_pred EECCCCcEEEeeeC-CCcccCeEECCCCCEEEEEEeeccC------------------------------CCCCeEEEEE
Confidence 34445554433321 2335678999999999998765211 0124789999
Q ss_pred CCCCceEEEeccCCCCCCCCCCcee-------EEEEEccCCeEEEEEEeccC---ccEEEEEEECCCCceEEEEEeecC-
Q 008274 87 AAGGPVSWMDLQCGGTDQNYDEEYL-------ARVNWMHGNILTAQVLNRSQ---TKLKVLKFDIKTGQRKVILVEELD- 155 (571)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~wspDg~~i~~~~~r~~---~~~~i~~~d~~~g~~~~l~~~~~~- 155 (571)
+++++.++++. ..... ..+.|||||+ +++...+.. ....||.+|+++|+.++++.....
T Consensus 87 ~~~g~~~~lt~---------~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~ 156 (1045)
T 1k32_A 87 GENGEIKRITY---------FSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATH 156 (1045)
T ss_dssp TTTTEEEECCC---------CCEEEETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSE
T ss_pred CCCCCeEEccc---------CCCcccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcce
Confidence 99998777643 33344 7899999999 777766542 234799999999987766432110
Q ss_pred -C-----------------------------eeecc-CC------cccCCCCCccCCCeEEEEEecCCccEEEEEeCCCc
Q 008274 156 -S-----------------------------WVNLH-DC------FTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGT 198 (571)
Q Consensus 156 -~-----------------------------w~~~~-~~------~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~ 198 (571)
. |.... .. .......+.|+++.+++.++++|..+||.++.+++
T Consensus 157 ~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~ 236 (1045)
T 1k32_A 157 ILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGK 236 (1045)
T ss_dssp EEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSC
T ss_pred eeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCC
Confidence 0 11000 00 00000011345667888888888889999999888
Q ss_pred eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC------------CceEEEE
Q 008274 199 CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG------------KGKHVAV 266 (571)
Q Consensus 199 ~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~------------~g~~~~~ 266 (571)
..++|+.... +... .|||||+.|++... ..|+.+++ .+. ....++.. .....+.
T Consensus 237 ~~~~l~~~~~-~~~~-~~SpDG~~la~~~~------~~i~~~d~--~~~----~l~~l~~~~~~~~~~~~~~~~~v~~~~ 302 (1045)
T 1k32_A 237 DLRKHTSFTD-YYPR-HLNTDGRRILFSKG------GSIYIFNP--DTE----KIEKIEIGDLESPEDRIISIPSKFAED 302 (1045)
T ss_dssp SCEECCCCCS-SCEE-EEEESSSCEEEEET------TEEEEECT--TTC----CEEECCCCCCCBCCSEEEECGGGGEEE
T ss_pred cceEecCCCC-ccee-eEcCCCCEEEEEeC------CEEEEecC--Cce----EeeeeccCcccccccccccccccceee
Confidence 8888876541 2223 59999999998741 45777766 222 22233321 1345679
Q ss_pred EC-CCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 267 LD-HNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 267 ~s-~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
|| |||+++++.. -..++++++.+++
T Consensus 303 ~S~pdG~~la~~~-----~~~i~~~~~~~~~ 328 (1045)
T 1k32_A 303 FSPLDGDLIAFVS-----RGQAFIQDVSGTY 328 (1045)
T ss_dssp EEECGGGCEEEEE-----TTEEEEECTTSSB
T ss_pred ecCCCCCEEEEEE-----cCEEEEEcCCCCc
Confidence 99 9999998876 2367777665444
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.35 E-value=8.7e-11 Score=112.54 Aligned_cols=205 Identities=13% Similarity=0.116 Sum_probs=140.0
Q ss_pred EEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCCCC
Q 008274 28 YWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYD 107 (571)
Q Consensus 28 ~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~~~ 107 (571)
-.++|||++|.|+..+....... .+ . ..-+..|+.+++++++.+.+.-.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~------------------~~-~---~~n~~~Iy~i~~dg~~~~~l~~~--------- 106 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQ------------------TF-F---SYDRNSLCRIKRNGHGSTVLDPD--------- 106 (302)
T ss_dssp EEEEECSSEEEEEEECC------------------------CC-S---SCCSEEEEEEETTSCCCEEEECS---------
T ss_pred eeEEEcCCEEEEEECCCCccccc------------------ce-e---ccCCCeEEEEeCCCCcceEeecC---------
Confidence 34789999999987654321000 00 0 00135799999999987777431
Q ss_pred CceeEEEEEccCCeEEEEEE-eccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCC
Q 008274 108 EEYLARVNWMHGNILTAQVL-NRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTG 186 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~-~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g 186 (571)
.. ..|+++|+.|++.. .+. ....||++++++.+.++|+..... .+ .|.++.++|++. |
T Consensus 107 ~~----~~~s~~g~~Iy~~~~~~~-~~~~Iy~~~~dGs~~~~lt~~~~~-------~~-------~~~g~~iy~t~~--g 165 (302)
T 3s25_A 107 PC----IYASLIGNYIYYLHYDTQ-TATSLYRIRIDGEEKKKIKNHYLF-------TC-------NTSDRYFYYNNP--K 165 (302)
T ss_dssp CE----EEEEEETTEEEEEEESSS-SCEEEEEEETTSCCCEEEESSCCC-------CS-------EEETTEEEEECT--T
T ss_pred Cc----cEEEEeCCEEEEEeecCC-CCceEEEEECCCCCeEEEeCCCce-------Ee-------eEECCEEEEEeC--C
Confidence 11 27899999988876 233 356799999999888888764211 11 234555777755 7
Q ss_pred ccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEE
Q 008274 187 FRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAV 266 (571)
Q Consensus 187 ~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~ 266 (571)
..+||+++++++..++|+.+... .+ ++|++++|||+....+ .+|+++++ +|+ ..++|+.... ..
T Consensus 166 ~~~Iy~~~l~g~~~~~l~~~~~~--~~--~~P~g~~iy~t~~~~~---~~I~~~~l--dG~----~~~~Lt~~~~---~~ 229 (302)
T 3s25_A 166 NGQLYRYDTASQSEALFYDCNCY--KP--VVLDDTNVYYMDVNRD---NAIVHVNI--NNP----NPVVLTEANI---EH 229 (302)
T ss_dssp TCCEEEEETTTTEEEEEECSCEE--EE--EEEETTEEEEEEGGGT---TEEEEECS--SSC----CCEECSCSCE---EE
T ss_pred CceEEEEECCCCCEEEEeCCCcc--ce--eeecCCEEEEEEcCCC---cEEEEEEC--CCC----CeEEEeCCCc---ce
Confidence 78899999999998888776542 22 5699999999876544 68999999 776 6678876432 46
Q ss_pred ECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 267 LDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 267 ~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
++|+++++.|..... . +.|+.+++ +|...++|..
T Consensus 230 ~~~~g~~Iy~~~~~~-~-~~i~~~~~-DG~~r~~l~~ 263 (302)
T 3s25_A 230 YNVYGSLIFYQRGGD-N-PALCVVKN-DGTGFKELAK 263 (302)
T ss_dssp EEEETTEEEEEECSS-S-CEEEEEET-TSCCCEEEEE
T ss_pred EEECCCEEEEEECCC-C-cEEEEEEC-CCCccEEeeC
Confidence 889999997754332 2 79999998 5655555644
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=6.3e-11 Score=129.00 Aligned_cols=193 Identities=12% Similarity=0.078 Sum_probs=120.4
Q ss_pred EEEEEECCC-----CceEEEeccCCCCCCCCCCc-------------eeEEEEEccCCeEEEEEEecc------------
Q 008274 81 RLGVVSAAG-----GPVSWMDLQCGGTDQNYDEE-------------YLARVNWMHGNILTAQVLNRS------------ 130 (571)
Q Consensus 81 ~l~~~dl~~-----~~~~~~~~~~~~~~~~~~~~-------------~~~~~~wspDg~~i~~~~~r~------------ 130 (571)
.|+++|+++ ++.++++.. .... ....+.|||||+.|++.+...
T Consensus 142 ~i~v~~~~~~~~~~g~~~~~~~~-------~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~ 214 (706)
T 2z3z_A 142 NLYIARGGKLGEGMSRAIAVTID-------GTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYH 214 (706)
T ss_dssp EEEEEECBCTTSCCCCCEESCSC-------CBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECC
T ss_pred eEEEEecCcccccCCCcEEeccC-------CCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccC
Confidence 579999998 887766432 1111 135689999999988876321
Q ss_pred -----------------CccEEEEEEECCCCceEEEEEee-cCCeeeccCCcccCCCCCccCCCe--EEEEEec--CCcc
Q 008274 131 -----------------QTKLKVLKFDIKTGQRKVILVEE-LDSWVNLHDCFTPLDKGVTKYSGG--FIWASEK--TGFR 188 (571)
Q Consensus 131 -----------------~~~~~i~~~d~~~g~~~~l~~~~-~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~~--~g~~ 188 (571)
.....|+++|+++|+.+.+.... ...++. . ..|++|+ +++.+.. ....
T Consensus 215 ~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~------~----~~~spdg~~l~~~~~~~~~~~~ 284 (706)
T 2z3z_A 215 PLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT------N----LSWSPDENILYVAEVNRAQNEC 284 (706)
T ss_dssp SSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE------E----EEECTTSSEEEEEEECTTSCEE
T ss_pred CCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe------e----EEEECCCCEEEEEEeCCCCCee
Confidence 13467999999999876654321 111111 0 1355665 5544432 2246
Q ss_pred EEEEEeCCCc-eeeceeec---CeE--EEEEEEEee--cCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC
Q 008274 189 HLYLHDINGT-CLGPITEG---DWM--VEQIVGVNE--ASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK 260 (571)
Q Consensus 189 ~l~~~~~~~~-~~~~lT~~---~~~--~~~~~~~s~--dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~ 260 (571)
.|+++++.++ +.+.+... .+. +.. +.|+| ||+. ++++++++ ..+||.+++ ++. ..+.|+...
T Consensus 285 ~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~-~~~sp~~dg~~-l~~~~~~g--~~~l~~~~~--~~~----~~~~l~~~~ 354 (706)
T 2z3z_A 285 KVNAYDAETGRFVRTLFVETDKHYVEPLHP-LTFLPGSNNQF-IWQSRRDG--WNHLYLYDT--TGR----LIRQVTKGE 354 (706)
T ss_dssp EEEEEETTTCCEEEEEEEEECSSCCCCCSC-CEECTTCSSEE-EEEECTTS--SCEEEEEET--TSC----EEEECCCSS
T ss_pred EEEEEECCCCceeeEEEEccCCCeECccCC-ceeecCCCCEE-EEEEccCC--ccEEEEEEC--CCC----EEEecCCCC
Confidence 8999999887 65555432 111 122 35999 9984 45666655 388999986 443 566777654
Q ss_pred c-eEE-EEECCCCCEEEEEeeCCCCC--CEEEEEEcCCCceeEecc
Q 008274 261 G-KHV-AVLDHNMRNFVDFHDSLDSP--PRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 261 g-~~~-~~~s~~g~~~v~~~s~~~~p--~~l~~~~~~~~~~~~~l~ 302 (571)
. ... +.+||||+.+++..+. ..| ..+|.+++.+++ .+.+.
T Consensus 355 ~~v~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~~~-~~~l~ 398 (706)
T 2z3z_A 355 WEVTNFAGFDPKGTRLYFESTE-ASPLERHFYCIDIKGGK-TKDLT 398 (706)
T ss_dssp SCEEEEEEECTTSSEEEEEESS-SCTTCBEEEEEETTCCC-CEESC
T ss_pred eEEEeeeEEcCCCCEEEEEecC-CCCceEEEEEEEcCCCC-ceecc
Confidence 3 233 5899999999887655 332 488888886554 45554
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.33 E-value=7.8e-13 Score=133.79 Aligned_cols=165 Identities=12% Similarity=0.031 Sum_probs=108.4
Q ss_pred CceEEEEEcCCCCceeecccccccchh-hhHHHHh-CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDM-RAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~-~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
..|+||++||..++.. ..| .. .++.|++ .||.|+++|+||+|.+........... ...|+.++++++.
T Consensus 69 ~~~~vvllHG~~~s~~--~~w----~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~----~~~dl~~~i~~l~ 138 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSGE--NSW----LSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRV----VGAEVAYLVQVLS 138 (432)
T ss_dssp TSEEEEEECCTTCCTT--SHH----HHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCCC--chH----HHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHH----HHHHHHHHHHHHH
Confidence 4589999999766531 122 22 4566665 799999999999876542211111111 1467888888887
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCC
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMK 505 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~ 505 (571)
++..++.+++.++|||+||.+++.++.++|++++++++.+|...+.. ..+. .. ..+ ....
T Consensus 139 ~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~----------~~~~--~~---~l~-----~~da 198 (432)
T 1gpl_A 139 TSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQ----------DTPE--EV---RLD-----PSDA 198 (432)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTT----------TCCT--TT---SCC-----GGGS
T ss_pred HhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccccccc----------CCCh--hh---ccC-----cCCC
Confidence 65445678999999999999999999999999999998887643210 0000 00 001 1233
Q ss_pred CcEEEEecCCCCCCCh-HHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 506 GKLLLVHGMIDENVHF-RHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~-~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
.++.+||+..|.+||. ... +. ..-.++..||++||..
T Consensus 199 ~~V~vIHt~~d~lVP~~~~g--~~------~~lg~~dfypngg~~q 236 (432)
T 1gpl_A 199 KFVDVIHTDISPILPSLGFG--MS------QKVGHMDFFPNGGKDM 236 (432)
T ss_dssp SEEEEECSCCSCHHHHCCCB--CS------SCCSSEEEEEGGGSSC
T ss_pred ceEEEEEcCCcccccccccc--cc------ccccceEEccCCCCCC
Confidence 5899999999999886 100 11 1123556789999954
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.31 E-value=3e-10 Score=124.16 Aligned_cols=223 Identities=10% Similarity=-0.009 Sum_probs=138.5
Q ss_pred EECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECC---CCceEEE-eccCCCCCC
Q 008274 29 WWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA---GGPVSWM-DLQCGGTDQ 104 (571)
Q Consensus 29 ~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~---~~~~~~~-~~~~~~~~~ 104 (571)
..+|||++++|.+.+.... ...||+.+.. +++.+.+ +.. .+
T Consensus 113 ~p~pdG~~~~~~~~~~~~~-------------------------------~~~l~~~~~~~~~~~~~~~lld~~----~l 157 (741)
T 1yr2_A 113 LPQRRGASVFYSWNSGLMN-------------------------------QSQLLVRPADAPVGTKGRVLLDPN----TW 157 (741)
T ss_dssp CCEEETTEEEEEEECSSCS-------------------------------SCEEEEEETTSCTTCCCEEEECGG----GC
T ss_pred CCEEECCEEEEEEEcCCCe-------------------------------EEEEEEEcCCccCCCCCEEEECHH----Hh
Confidence 3569999999987654431 1357888876 6665544 211 11
Q ss_pred CC-CCceeEEEEEccCCeEEEEEEeccCc-cEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC-eEEEE
Q 008274 105 NY-DEEYLARVNWMHGNILTAQVLNRSQT-KLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG-GFIWA 181 (571)
Q Consensus 105 ~~-~~~~~~~~~wspDg~~i~~~~~r~~~-~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d-~~~~~ 181 (571)
+. ....+..++|||||++|++..++.+. ...|+++|+++|+........ .. +.. +.|++| .|++.
T Consensus 158 ~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~----~~----~~~----~~wspD~~l~~~ 225 (741)
T 1yr2_A 158 AKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKW----VK----FSG----LAWLGNDALLYS 225 (741)
T ss_dssp C----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEE----EE----SCC----CEESTTSEEEEE
T ss_pred ccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCC----ce----ecc----EEEECCCEEEEE
Confidence 11 12467889999999999998887554 368999999999976543211 11 000 134443 57776
Q ss_pred EecCC-----------ccEEEEEeCCCcee--eceeecCe---EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCC
Q 008274 182 SEKTG-----------FRHLYLHDINGTCL--GPITEGDW---MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPD 245 (571)
Q Consensus 182 s~~~g-----------~~~l~~~~~~~~~~--~~lT~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~ 245 (571)
+.... ..+||++++.++.. +.+..+.. .+..+ .|||||++|++.+.+.......||.+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~-~~SpDG~~l~~~~~~~~~~~~~l~~~d~~-- 302 (741)
T 1yr2_A 226 RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA-SVSSDGRWVVITSSEGTDPVNTVHVARVT-- 302 (741)
T ss_dssp ECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE-EECTTSCEEEEEEECTTCSCCEEEEEEEE--
T ss_pred EecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE-EECCCCCEEEEEEEccCCCcceEEEEECC--
Confidence 65433 56799999876652 23332211 13344 59999999999987652235789999983
Q ss_pred CCCCCCC-CeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCC-ceeEeccC
Q 008274 246 WNHTLEA-PVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG-SLVLPLYE 303 (571)
Q Consensus 246 g~~~~~~-~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~-~~~~~l~~ 303 (571)
++. .. .++|+.........++++|+.+++..........|+++++.++ ...+.+..
T Consensus 303 ~~~--~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 303 NGK--IGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp TTE--ECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC
T ss_pred CCC--CcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec
Confidence 320 13 5677654433333456999999888765444578999998654 34455543
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.2e-10 Score=132.43 Aligned_cols=182 Identities=15% Similarity=0.106 Sum_probs=122.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc--CccEEEEEEECCCCceEEEEEeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS--QTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~--~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
.||++++++++.++++. ....+..++|||||+.|++.+.+. .....|+++|+++|+.++|+.+... .
T Consensus 34 ~l~~~~~~gg~~~~lt~---------~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~--~ 102 (1045)
T 1k32_A 34 DLWEHDLKSGSTRKIVS---------NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGK--S 102 (1045)
T ss_dssp EEEEEETTTCCEEEEEC---------SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEE--E
T ss_pred cEEEEECCCCcEEEeee---------CCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCc--c
Confidence 47999999999888843 456788999999999999998762 2456899999999998877543211 1
Q ss_pred eccCCcccCCCCCccCCCe-EEEEEecC----CccEEEEEeCCCceeeceeecCe-------------------------
Q 008274 159 NLHDCFTPLDKGVTKYSGG-FIWASEKT----GFRHLYLHDINGTCLGPITEGDW------------------------- 208 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~-~~~~s~~~----g~~~l~~~~~~~~~~~~lT~~~~------------------------- 208 (571)
. ..+.. ...+.|++|+ ++|.+.++ +..+||.+++++++.++|+.+..
T Consensus 103 ~--~~~~~-~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~ 179 (1045)
T 1k32_A 103 T--GRRMF-TDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGY 179 (1045)
T ss_dssp E--TTEEC-SEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTC
T ss_pred c--ccccc-cccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccc
Confidence 0 00000 0011355665 77777654 55789999988887777665311
Q ss_pred -------------------------EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 209 -------------------------MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 209 -------------------------~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
.+..+ .|+++ .++|++..++. .+||.+++ ++. ..++++......
T Consensus 180 ~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~-~~s~d--~l~~~~~~dg~--~~l~~~~~--~g~----~~~~l~~~~~~~ 248 (1045)
T 1k32_A 180 RGGTRGKIWIEVNSGAFKKIVDMSTHVSSP-VIVGH--RIYFITDIDGF--GQIYSTDL--DGK----DLRKHTSFTDYY 248 (1045)
T ss_dssp CSTTCCEEEEEEETTEEEEEECCSSCCEEE-EEETT--EEEEEECTTSS--CEEEEEET--TSC----SCEECCCCCSSC
T ss_pred cCCCcCCEEEECCCCCeEECcCCCCcccce-EEeCC--EEEEEEeccCc--eEEEEEeC--CCC----cceEecCCCCcc
Confidence 00111 24443 78888776653 78999887 454 566777655555
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
...+||||+++++.. ...++++++
T Consensus 249 ~~~~SpDG~~la~~~-----~~~i~~~d~ 272 (1045)
T 1k32_A 249 PRHLNTDGRRILFSK-----GGSIYIFNP 272 (1045)
T ss_dssp EEEEEESSSCEEEEE-----TTEEEEECT
T ss_pred eeeEcCCCCEEEEEe-----CCEEEEecC
Confidence 569999999998863 347888877
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.27 E-value=2e-10 Score=109.97 Aligned_cols=177 Identities=11% Similarity=0.050 Sum_probs=127.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC----------ccEEEEEEECCCCceEEEE
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ----------TKLKVLKFDIKTGQRKVIL 150 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~----------~~~~i~~~d~~~g~~~~l~ 150 (571)
.||.++.+++..+.|+-. . .-.+++||+.|+++..+.. +...||++++++++.++|+
T Consensus 38 ~ly~~~~dg~~~~~l~~~-----------~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~ 104 (302)
T 3s25_A 38 RLYAMNIDGSNIHKLSND-----------T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD 104 (302)
T ss_dssp EEEEEETTSCSCEEEEEE-----------E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE
T ss_pred eEEEEcCCCCCCEEccCC-----------c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee
Confidence 689999999888877431 1 1356899999999987752 2568999999999988886
Q ss_pred EeecCCeeeccCCcccCCCCCccCCCeEEEEE-ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcC
Q 008274 151 VEELDSWVNLHDCFTPLDKGVTKYSGGFIWAS-EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 151 ~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s-~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
......+. + ..+.++|.. .+.+...||+++++|...++||.... . .++++|+.|||+..
T Consensus 105 ~~~~~~~s-------~-------~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~-~~~~~g~~iy~t~~- 164 (302)
T 3s25_A 105 PDPCIYAS-------L-------IGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----F-TCNTSDRYFYYNNP- 164 (302)
T ss_dssp CSCEEEEE-------E-------ETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----C-CSEEETTEEEEECT-
T ss_pred cCCccEEE-------E-------eCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----e-EeeEECCEEEEEeC-
Confidence 54322221 1 234466654 36778899999999999999998754 2 37889999999977
Q ss_pred CCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCC
Q 008274 230 DGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQ 304 (571)
Q Consensus 230 ~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~ 304 (571)
+ ..+||++++ +|. ..++|..+. ... .++|++++++|+-.. ..+.|++.++ +|...++|+..
T Consensus 165 -g--~~~Iy~~~l--~g~----~~~~l~~~~-~~~-~~~P~g~~iy~t~~~--~~~~I~~~~l-dG~~~~~Lt~~ 225 (302)
T 3s25_A 165 -K--NGQLYRYDT--ASQ----SEALFYDCN-CYK-PVVLDDTNVYYMDVN--RDNAIVHVNI-NNPNPVVLTEA 225 (302)
T ss_dssp -T--TCCEEEEET--TTT----EEEEEECSC-EEE-EEEEETTEEEEEEGG--GTTEEEEECS-SSCCCEECSCS
T ss_pred -C--CceEEEEEC--CCC----CEEEEeCCC-ccc-eeeecCCEEEEEEcC--CCcEEEEEEC-CCCCeEEEeCC
Confidence 2 368999999 664 455665432 233 356999999997654 3379999998 45555677653
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.2e-11 Score=128.04 Aligned_cols=213 Identities=14% Similarity=0.056 Sum_probs=124.9
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHH--HhCCcEEEEECCCC-CCCChhhhHHHHhcc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYL--RSKGILVWKLDNRG-TARRGLKFEASIKHN 408 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l--~~~G~~v~~~d~rG-~~~~~~~~~~~~~~~ 408 (571)
|...+|.|.... ..+++|+||++|||+........+ .. ...+ ...|++|+++|||. .-|+........ ..
T Consensus 86 l~l~v~~P~~~~-~~~~~Pviv~iHGGg~~~g~~~~~----~~-~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~-~~ 158 (522)
T 1ukc_A 86 LFINVFKPSTAT-SQSKLPVWLFIQGGGYAENSNANY----NG-TQVIQASDDVIVFVTFNYRVGALGFLASEKVRQ-NG 158 (522)
T ss_dssp CEEEEEEETTCC-TTCCEEEEEEECCSTTTSCCSCSC----CC-HHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHH-SS
T ss_pred CEEEEEECCCCC-CCCCCCEEEEECCCccccCCcccc----Cc-HHHHHhcCCcEEEEEecccccccccccchhccc-cC
Confidence 566778886531 235789999999998765422222 21 1222 25699999999993 211111001100 01
Q ss_pred CCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC----CCeeEEEEEcCccCCccccc---chhh
Q 008274 409 CGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF----PDVFQCAVSGAPVTSWDGYD---TFYT 478 (571)
Q Consensus 409 ~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~----~~~~~~~v~~~~~~~~~~~~---~~~~ 478 (571)
.+...+.|+.++++|+.+. ...|+++|+|+|+|+||.++..+++.. ..+|+++|+.+|........ ....
T Consensus 159 ~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~ 238 (522)
T 1ukc_A 159 DLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTVSEMEFQF 238 (522)
T ss_dssp CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCCSGGGHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCCHHHHHHHH
Confidence 1233488999999999875 346999999999999999887777653 67899999998865422110 0111
Q ss_pred hh---hcCCCC--CChhhhccCCcchhhc---------cCCCc--EEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEE
Q 008274 479 EK---YMGLPS--EDPVGYEYSSVMHHVH---------KMKGK--LLLVHGMIDENVHFRHTARLINALVAARKPYEILI 542 (571)
Q Consensus 479 ~~---~~g~~~--~~~~~~~~~s~~~~~~---------~~~~p--~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 542 (571)
.. .+|... +..+.+...+....+. ....| .+.++...|..+.+.+..++.++.+..++++-+-.
T Consensus 239 ~~~~~~~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g~~~~vp~l~G~ 318 (522)
T 1ukc_A 239 ERFVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGNFIKVPVLVGD 318 (522)
T ss_dssp HHHHHHTTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHTCSCCCCEEEEE
T ss_pred HHHHHHcCCCCHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCcccCCCHHHHHhcCCCCCCCEEEEe
Confidence 11 123321 1111122222111111 11223 55667777877777777777665544445666666
Q ss_pred cCCCCCCCC
Q 008274 543 FPDERHMPR 551 (571)
Q Consensus 543 ~~~~~H~~~ 551 (571)
..+++|.+.
T Consensus 319 ~~~Eg~~f~ 327 (522)
T 1ukc_A 319 DTDEGSNFA 327 (522)
T ss_dssp ETBGGGGTS
T ss_pred ecchhHHhh
Confidence 888898774
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.26 E-value=4.4e-11 Score=113.71 Aligned_cols=108 Identities=19% Similarity=0.106 Sum_probs=68.4
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhC--CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
+.| ||++||..++.... ..|...++.|++. |+.|+++|+ |+|.+........ .. ..+++...++.+.
T Consensus 5 ~~p-vVllHG~~~~~~~~----~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~-~~----~~~~~~~~~~~l~ 73 (279)
T 1ei9_A 5 PLP-LVIWHGMGDSCCNP----LSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFF-LN----VNSQVTTVCQILA 73 (279)
T ss_dssp SCC-EEEECCTTCCSCCT----TTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHH-SC----HHHHHHHHHHHHH
T ss_pred CCc-EEEECCCCCCCCCc----ccHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccc-cC----HHHHHHHHHHHHH
Confidence 335 67799976543100 1345567888765 899999998 8876542111111 11 1233334444443
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCCe-eEEEEEcCcc
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDV-FQCAVSGAPV 467 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~-~~~~v~~~~~ 467 (571)
..... .+++.++||||||.++..++.++|+. ++..|+.++.
T Consensus 74 ~~~~l-~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p 115 (279)
T 1ei9_A 74 KDPKL-QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp SCGGG-TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred hhhhc-cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCc
Confidence 32211 26899999999999999999999984 8998876653
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=7.5e-12 Score=129.84 Aligned_cols=131 Identities=15% Similarity=0.207 Sum_probs=87.4
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHH-HhCCcEEEEECCCCCC-CC--hhhhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYL-RSKGILVWKLDNRGTA-RR--GLKFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~rG~~-~~--~~~~~~~~~~ 407 (571)
+...+|.|.... ..+++|+||++|||+........+... ....+.+ .+.|++|+++|||... ++ ..+... .
T Consensus 98 l~l~v~~P~~~~-~~~~~Pv~v~iHGGg~~~g~~~~~~~~-~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~---~ 172 (534)
T 1llf_A 98 LTINVVRPPGTK-AGANLPVMLWIFGGGFEIGSPTIFPPA-QMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKA---E 172 (534)
T ss_dssp CEEEEEECTTCC-TTCCEEEEEEECCSTTTSCCGGGSCCH-HHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH---H
T ss_pred eEEEEEECCCCC-CCCCceEEEEEeCCCcccCCCcccCch-HHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccc---c
Confidence 666788897531 235789999999998765432222110 1111222 2479999999999532 11 111111 1
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--------CCeeEEEEEcCcc
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--------PDVFQCAVSGAPV 467 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--------~~~~~~~v~~~~~ 467 (571)
..+...+.|+.++++|+.+. ...|+++|+|+|+|+||.+++.++... ..+|+++|+.+|.
T Consensus 173 ~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 173 GSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp TCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 22334589999999999875 347999999999999999888776653 5679999998874
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=1.5e-11 Score=128.05 Aligned_cols=128 Identities=20% Similarity=0.290 Sum_probs=88.9
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCC-CCCCChhhhHHHHhccC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNR-GTARRGLKFEASIKHNC 409 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~r-G~~~~~~~~~~~~~~~~ 409 (571)
|...+|.|.... ..+++|+||++|||+........| . ...|+ ..|++|+.+||| |..++...... ...
T Consensus 99 l~lnv~~P~~~~-~~~~~Pv~v~iHGG~~~~g~~~~~----~--~~~la~~~g~vvv~~nYRlg~~gf~~~~~~---~~~ 168 (542)
T 2h7c_A 99 LYLNIYTPADLT-KKNRLPVMVWIHGGGLMVGAASTY----D--GLALAAHENVVVVTIQYRLGIWGFFSTGDE---HSR 168 (542)
T ss_dssp CEEEEEECSCTT-SCCCEEEEEEECCSTTTSCCSTTS----C--CHHHHHHHTCEEEEECCCCHHHHHCCCSST---TCC
T ss_pred cEEEEEECCCCC-CCCCCCEEEEECCCcccCCCcccc----C--HHHHHhcCCEEEEecCCCCccccCCCCCcc---cCc
Confidence 555678887642 236789999999998765432222 2 22344 589999999999 32111110000 111
Q ss_pred CCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc--CCCeeEEEEEcCccCC
Q 008274 410 GRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVTS 469 (571)
Q Consensus 410 ~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~--~~~~~~~~v~~~~~~~ 469 (571)
+...+.|+.++++|+.+. ...|+++|.|+|+|+||.++..++.. .+.+|+++|+.+|...
T Consensus 169 ~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 169 GNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 223478999999999875 35799999999999999999988876 3679999999888654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.18 E-value=5.7e-10 Score=121.07 Aligned_cols=215 Identities=12% Similarity=0.016 Sum_probs=133.0
Q ss_pred EEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC-C
Q 008274 28 YWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN-Y 106 (571)
Q Consensus 28 ~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~-~ 106 (571)
...+|||++++|++.+..+. ...||+.+..+++.+.+.-.. .+. +
T Consensus 73 ~~p~~dG~~~~~~~~~~~~~-------------------------------~~~l~~~~~~~~~~~~l~d~~---~~a~~ 118 (695)
T 2bkl_A 73 STPSRRNGRFFYVRTHKDKE-------------------------------KAILYWRQGESGQEKVLLDPN---GWSKD 118 (695)
T ss_dssp CCCEEETTEEEEEEECTTCS-------------------------------SCEEEEEESTTSCCEEEECGG---GSSSS
T ss_pred CCCEEECCEEEEEEEcCCCe-------------------------------EEEEEEEcCCCCCcEEEEchH---HhccC
Confidence 34569999999987654331 135788888877766663210 001 1
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCc-cEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEe
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQT-KLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASE 183 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~-~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~ 183 (571)
....+..++|||||++|++..++... ...|+++|+++|+...... . .+.. + ..+.|++|+ |++.+.
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~-~--~~~~----~----~~~~wspDg~~l~~~~~ 187 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV-I--EGGK----Y----ATPKWTPDSKGFYYEWL 187 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC-B--SCCT----T----CCCEECTTSSEEEEEEC
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc-c--Cccc----c----cceEEecCCCEEEEEEe
Confidence 23467889999999999998887653 4689999999998631000 0 1110 0 112566665 666665
Q ss_pred cC----------CccEEEEEeCCCcee--eceeec---CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCC
Q 008274 184 KT----------GFRHLYLHDINGTCL--GPITEG---DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNH 248 (571)
Q Consensus 184 ~~----------g~~~l~~~~~~~~~~--~~lT~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~ 248 (571)
+. ...+||++++.+++. +.+..+ ...+..+ .|||||++|++.+.... ....||.++. .+.
T Consensus 188 d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~-~~SpDG~~l~~~~~~~~-~~~~l~~~~~--~~~- 262 (695)
T 2bkl_A 188 PTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS-DLSRDGKYLFVYILRGW-SENDVYWKRP--GEK- 262 (695)
T ss_dssp CCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE-EECTTSCCEEEEEEETT-TEEEEEEECT--TCS-
T ss_pred cCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE-EECCCCCEEEEEEeCCC-CceEEEEEcC--CCC-
Confidence 43 257899999887653 233332 1123344 49999999999987652 3578888865 332
Q ss_pred CCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 249 TLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 249 ~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
..++|+.........++++|+ +++..........|+++++.+++
T Consensus 263 ---~~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 263 ---DFRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp ---SCEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred ---ceEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 566776543322223347887 66654432234689999886554
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=99.17 E-value=1.7e-11 Score=126.17 Aligned_cols=130 Identities=19% Similarity=0.238 Sum_probs=89.5
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCC-cEEEEECCC----CCCCChhhhHHHHh
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG-ILVWKLDNR----GTARRGLKFEASIK 406 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~d~r----G~~~~~~~~~~~~~ 406 (571)
+...+|.|.. ..+++|+||++|||+........+ ......|+++| ++|+++||| |.+..+..... ..
T Consensus 85 l~l~v~~P~~---~~~~~Pviv~iHGGg~~~g~~~~~----~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~-~~ 156 (498)
T 2ogt_A 85 LYLNIWSPAA---DGKKRPVLFWIHGGAFLFGSGSSP----WYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGE-AY 156 (498)
T ss_dssp CEEEEEESCS---SSCCEEEEEEECCSTTTSCCTTCG----GGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCG-GG
T ss_pred cEEEEEecCC---CCCCCcEEEEEcCCccCCCCCCCC----cCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccc-cc
Confidence 4556677863 226789999999998543322111 11256777766 999999999 55443321100 01
Q ss_pred ccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccCC
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVTS 469 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~~ 469 (571)
...+...+.|+.++++|+.++ ...|+++|+|+|+|+||.+++.++... ..+|+++|+.+|...
T Consensus 157 ~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 157 AQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 111223378999999999875 346999999999999999998888753 468999999998765
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.10 E-value=4.4e-08 Score=98.04 Aligned_cols=207 Identities=10% Similarity=-0.008 Sum_probs=129.5
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
....+.|||||++|++...++ ..|++||+++++......
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~-----------------------------------~~v~v~d~~~~~~~~~~~------ 113 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMAS-----------------------------------STLSVIDTTSNTVAGTVK------ 113 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTT-----------------------------------TEEEEEETTTTEEEEEEE------
T ss_pred CccceEECCCCCEEEEEECCC-----------------------------------CEEEEEECCCCeEEEEEe------
Confidence 345788999999887753221 147899999987654422
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWAS 182 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s 182 (571)
.......+.|+|||+.+++....++ .|+++|+.+++........... . . ..+++++ .++++
T Consensus 114 ---~~~~~~~~~~s~dg~~l~~~~~~~~---~v~~~d~~~~~~~~~~~~~~~~---~-----~----~~~~~dg~~l~~~ 175 (391)
T 1l0q_A 114 ---TGKSPLGLALSPDGKKLYVTNNGDK---TVSVINTVTKAVINTVSVGRSP---K-----G----IAVTPDGTKVYVA 175 (391)
T ss_dssp ---CSSSEEEEEECTTSSEEEEEETTTT---EEEEEETTTTEEEEEEECCSSE---E-----E----EEECTTSSEEEEE
T ss_pred ---CCCCcceEEECCCCCEEEEEeCCCC---EEEEEECCCCcEEEEEecCCCc---c-----e----EEECCCCCEEEEE
Confidence 2335677999999997766654332 5999999999866544321110 0 0 1234444 44444
Q ss_pred ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCce
Q 008274 183 EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGK 262 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~ 262 (571)
... -..|+++++.+++..........+..+ .|+++|+.|++.+.... ...++.+++. .+. ....+......
T Consensus 176 ~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~g~~l~~~~~~~~--~~~v~~~d~~-~~~----~~~~~~~~~~~ 246 (391)
T 1l0q_A 176 NFD-SMSISVIDTVTNSVIDTVKVEAAPSGI-AVNPEGTKAYVTNVDKY--FNTVSMIDTG-TNK----ITARIPVGPDP 246 (391)
T ss_dssp ETT-TTEEEEEETTTTEEEEEEECSSEEEEE-EECTTSSEEEEEEECSS--CCEEEEEETT-TTE----EEEEEECCSSE
T ss_pred eCC-CCEEEEEECCCCeEEEEEecCCCccce-EECCCCCEEEEEecCcC--CCcEEEEECC-CCe----EEEEEecCCCc
Confidence 322 246888998877655444433344555 49999999998875322 2567777872 221 23344444445
Q ss_pred EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 263 HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 263 ~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
..+.++|+|+++++..+.. ..+.++++.+++....+
T Consensus 247 ~~~~~s~dg~~l~~s~~~d---~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 247 AGIAVTPDGKKVYVALSFX---NTVSVIDTATNTITATM 282 (391)
T ss_dssp EEEEECTTSSEEEEEETTT---TEEEEEETTTTEEEEEE
T ss_pred cEEEEccCCCEEEEEcCCC---CEEEEEECCCCcEEEEE
Confidence 5668999999886665433 47999998877765554
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.7e-08 Score=96.03 Aligned_cols=181 Identities=9% Similarity=0.077 Sum_probs=104.0
Q ss_pred EEEEEECCCCce--EEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 81 RLGVVSAAGGPV--SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
.|+++|+++++. ..+.. .......+.|+|||+.++ +.....+...|+++|+++++.......... ..
T Consensus 63 ~i~~~d~~~~~~~~~~~~~---------~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-~~ 131 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQE---------GQSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYD-AV 131 (331)
T ss_dssp EEEEEECSSSSCEEEEEEE---------CSSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTT-EE
T ss_pred eEEEEECCCCceeEEeccc---------CCCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCC-cc
Confidence 578999998875 22222 122222378999999877 544443333699999999986554332111 11
Q ss_pred eccCCcccCCCCCccCCCe-EEEEEecC-Cc-cEEEEEeCCCce----eeceeecCeEEEEEEEEeecCcEEEEEEcCCC
Q 008274 159 NLHDCFTPLDKGVTKYSGG-FIWASEKT-GF-RHLYLHDINGTC----LGPITEGDWMVEQIVGVNEASGQVYFTGTLDG 231 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~-~~~~s~~~-g~-~~l~~~~~~~~~----~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~ 231 (571)
...+++|+ .++.++.. +. -.+|.++.++.. .+.+..+. ....+ .|+|||++||+.....+
T Consensus 132 -----------~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~-~~~~~-~~spdg~~l~v~~~~~~ 198 (331)
T 3u4y_A 132 -----------GIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGT-RPFNI-TFTPDGNFAFVANLIGN 198 (331)
T ss_dssp -----------EEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSS-SEEEE-EECTTSSEEEEEETTTT
T ss_pred -----------ceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCC-Cccce-EECCCCCEEEEEeCCCC
Confidence 01345555 45555543 33 445555533321 12222222 23344 49999999998876543
Q ss_pred CceeEEEEEEeCCCCCCCCCC---CeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 232 PLESHLYCAKLYPDWNHTLEA---PVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 232 ~~~~~l~~~~l~~~g~~~~~~---~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
.++.+++. ++. . ...+........+.++|||+++++.... ...++++++.+++.
T Consensus 199 ----~v~v~d~~-~~~----~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 199 ----SIGILETQ-NPE----NITLLNAVGTNNLPGTIVVSRDGSTVYVLTES---TVDVFNFNQLSGTL 255 (331)
T ss_dssp ----EEEEEECS-STT----SCEEEEEEECSSCCCCEEECTTSSEEEEECSS---EEEEEEEETTTTEE
T ss_pred ----eEEEEECC-CCc----ccceeeeccCCCCCceEEECCCCCEEEEEEcC---CCEEEEEECCCCce
Confidence 46666662 232 2 4445544444556899999987665432 34688899876654
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=99.09 E-value=1e-10 Score=121.63 Aligned_cols=131 Identities=17% Similarity=0.270 Sum_probs=87.0
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCC-CC--hhhhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTA-RR--GLKFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~-~~--~~~~~~~~~~ 407 (571)
+...+|.|.... ..+++||||++|||+........+.. .....+.++ ..|++|+.+|||... ++ ..+... .
T Consensus 106 l~l~v~~P~~~~-~~~~~Pviv~iHGGg~~~g~~~~~~~-~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~---~ 180 (544)
T 1thg_A 106 LYLNVFRPAGTK-PDAKLPVMVWIYGGAFVYGSSAAYPG-NSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITA---E 180 (544)
T ss_dssp CEEEEEEETTCC-TTCCEEEEEEECCCTTCCSGGGGCCS-HHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH---H
T ss_pred eEEEEEeCCCCC-CCCCCcEEEEECCCccccCCccccCc-hHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccc---c
Confidence 556677886531 23678999999999876543222211 111122222 368999999999632 00 111101 1
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--------CCeeEEEEEcCcc
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--------PDVFQCAVSGAPV 467 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--------~~~~~~~v~~~~~ 467 (571)
..+...+.|+.++++|+.+. ...|+++|+|+|+|+||.+++.++... ..+|+++|+.+|.
T Consensus 181 ~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 181 GNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp TCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence 22334589999999999875 347999999999999999998877652 4679999998874
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=2.5e-09 Score=115.85 Aligned_cols=217 Identities=12% Similarity=0.095 Sum_probs=142.1
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
..++.|||||++|||.....+. + ...|+++|+++|+.....+.
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~-~------------------------------~~~i~v~dl~tg~~~~~~~~------ 173 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGS-D------------------------------WREIHLMDVESKQPLETPLK------ 173 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSC-C------------------------------EEEEEEEETTTCSEEEEEEE------
T ss_pred EEEEEECCCCCEEEEEEecCCC-c------------------------------eEEEEEEECCCCCCCccccC------
Confidence 4567899999999997654332 1 24789999999997665442
Q ss_pred CCCCceeEEEEEccCCeEEEEEEecc---------CccEEEEEEECCCCce--EEEEEeec--CCeeeccCCcccCCCCC
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRS---------QTKLKVLKFDIKTGQR--KVILVEEL--DSWVNLHDCFTPLDKGV 171 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~---------~~~~~i~~~d~~~g~~--~~l~~~~~--~~w~~~~~~~~~~~~~~ 171 (571)
......++|| ||+.|++.+.+. +...+||+.++.+++. +.|..+.. ..|.- .+
T Consensus 174 ---~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~-----~~----- 239 (693)
T 3iuj_A 174 ---DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYV-----GA----- 239 (693)
T ss_dssp ---EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEE-----EE-----
T ss_pred ---CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEE-----EE-----
Confidence 1113467999 999999887764 2345799999988653 55655443 22211 01
Q ss_pred ccCCCe--EEEEEecCCc-cEEEEEeCCCc--eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCC
Q 008274 172 TKYSGG--FIWASEKTGF-RHLYLHDINGT--CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDW 246 (571)
Q Consensus 172 ~~~~d~--~~~~s~~~g~-~~l~~~~~~~~--~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g 246 (571)
.+++|+ +++.+.+.+. .+||+++++++ +.+.|+........+ |+++|+.|||.++.+.+ ..+|+++++ ++
T Consensus 240 ~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~--~~~~g~~l~~~t~~~~~-~~~l~~~d~--~~ 314 (693)
T 3iuj_A 240 TVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL--VDNKGSTLYLLTNRDAP-NRRLVTVDA--AN 314 (693)
T ss_dssp EECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE--EEEETTEEEEEECTTCT-TCEEEEEET--TS
T ss_pred EEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE--EeccCCEEEEEECCCCC-CCEEEEEeC--CC
Confidence 345555 4444444444 59999998776 567777654222222 78899999999998764 589999998 33
Q ss_pred CCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 247 NHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 247 ~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
... ...+.|+....... .++++++++++...... -+.|+++++. ++..+.+
T Consensus 315 ~~~-~~~~~l~~~~~~~~-~~s~~g~~lv~~~~~~g-~~~l~~~d~~-g~~~~~l 365 (693)
T 3iuj_A 315 PGP-AHWRDLIPERQQVL-TVHSGSGYLFAEYMVDA-TARVEQFDYE-GKRVREV 365 (693)
T ss_dssp CCG-GGCEEEECCCSSCE-EEEEETTEEEEEEEETT-EEEEEEECTT-SCEEEEE
T ss_pred CCc-cccEEEecCCCCEE-EEEEECCEEEEEEEECC-eeEEEEEECC-CCeeEEe
Confidence 211 01245554433333 89999999998876543 4588998875 4444544
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=1.7e-10 Score=116.99 Aligned_cols=112 Identities=14% Similarity=0.008 Sum_probs=81.1
Q ss_pred CCceEEEEEcCCCCceeecccccccchh-hhHHHHh-CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDM-RAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWL 424 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~-~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l 424 (571)
...|+||++||.+++.. ..| .. ++..|.+ .||.|+++|+||+|.+........... ..+|+.+.+++|
T Consensus 68 ~~~p~vvliHG~~~~~~--~~w----~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~----~~~dl~~li~~L 137 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGE--DGW----LLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRV----VGAEIAFLVQVL 137 (452)
T ss_dssp TTSEEEEEECCSCCTTC--TTH----HHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHH----HHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCC--chH----HHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHH----HHHHHHHHHHHH
Confidence 34589999999876531 122 22 3455655 499999999999877652111111111 256788888888
Q ss_pred HHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 425 IKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 425 ~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
.++..++.+++.|+|||+||.+|+.++.++|+++++++..+|..
T Consensus 138 ~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 138 STEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp HHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred HHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 76544567899999999999999999999999999999987764
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=1.8e-10 Score=107.47 Aligned_cols=186 Identities=10% Similarity=-0.044 Sum_probs=107.8
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|.|+++||.+++.. .|..++..|. .++.|+.+|+||.+. ..+++.+.++.+.
T Consensus 22 ~~~l~~~hg~~~~~~-------~~~~~~~~l~-~~~~v~~~d~~g~~~----------------~~~~~~~~i~~~~--- 74 (244)
T 2cb9_A 22 GKNLFCFPPISGFGI-------YFKDLALQLN-HKAAVYGFHFIEEDS----------------RIEQYVSRITEIQ--- 74 (244)
T ss_dssp SSEEEEECCTTCCGG-------GGHHHHHHTT-TTSEEEEECCCCSTT----------------HHHHHHHHHHHHC---
T ss_pred CCCEEEECCCCCCHH-------HHHHHHHHhC-CCceEEEEcCCCHHH----------------HHHHHHHHHHHhC---
Confidence 367888999776532 3444556665 589999999997531 1344444444431
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcC---CCeeEEEEEcCccCCcccccchhhhhhcCCCCCCh---hhh-------ccC
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARF---PDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDP---VGY-------EYS 495 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~-------~~~ 495 (571)
...++.++|||+||.++..++.+. ++.+..++..++..........-....+... ..+ +.+ ...
T Consensus 75 --~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 151 (244)
T 2cb9_A 75 --PEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTENDDSAAY-LPEAVRETVMQKKRCYQEY 151 (244)
T ss_dssp --SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC-------CC-SCHHHHHHHTHHHHHHHHH
T ss_pred --CCCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccccccHHHHHHH-hHHHHHHHHHHHHHHHHHH
Confidence 135799999999999999888764 5678887777654321000000000000000 000 000 000
Q ss_pred Cc-chhhccCCCcEEEEecC--CCCCCChHHHHHHHHHHHHc-CCCeeEEEcCCCCCC-CCCCCcHHHHHHHHHHHHHHh
Q 008274 496 SV-MHHVHKMKGKLLLVHGM--IDENVHFRHTARLINALVAA-RKPYEILIFPDERHM-PRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 496 s~-~~~~~~~~~p~lli~G~--~D~~v~~~~~~~~~~~l~~~-~~~~~~~~~~~~~H~-~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.. ......+++|+++++|+ +|. +++..... +.+. ..++++..+|+ +|. +...+....+.+.+.+||.+.
T Consensus 152 ~~~~~~~~~i~~Pvl~i~g~~~~D~-~~~~~~~~----w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i~~~L~~~ 225 (244)
T 2cb9_A 152 WAQLINEGRIKSNIHFIEAGIQTET-SGAMVLQK----WQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANIILNILDKI 225 (244)
T ss_dssp HHHCCCCSCBSSEEEEEECSBCSCC-CHHHHTTS----SGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHHHHHHHTC
T ss_pred HHhhccCCCcCCCEEEEEccCcccc-ccccchhH----HHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHHHHHHhcC
Confidence 00 01235678999999999 887 33332222 2222 24689999997 883 324456778888999998753
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.05 E-value=6.9e-08 Score=96.56 Aligned_cols=205 Identities=7% Similarity=-0.061 Sum_probs=128.1
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||++|+++...+ ..|.+||+++++....-.
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d-----------------------------------~~i~v~d~~~~~~~~~~~------- 71 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHS-----------------------------------NDVSIIDTATNNVIATVP------- 71 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGG-----------------------------------TEEEEEETTTTEEEEEEE-------
T ss_pred cceEEECCCCCEEEEECCCC-----------------------------------CeEEEEECCCCeEEEEEE-------
Confidence 45789999999986654221 147889999887654322
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EE-EEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FI-WAS 182 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~-~~s 182 (571)
.......+.|+|||+.+++....+. .|+++|+++++............ . ..+++++ .+ +..
T Consensus 72 --~~~~v~~~~~spdg~~l~~~~~~~~---~v~v~d~~~~~~~~~~~~~~~~~--------~----~~~s~dg~~l~~~~ 134 (391)
T 1l0q_A 72 --AGSSPQGVAVSPDGKQVYVTNMASS---TLSVIDTTSNTVAGTVKTGKSPL--------G----LALSPDGKKLYVTN 134 (391)
T ss_dssp --CSSSEEEEEECTTSSEEEEEETTTT---EEEEEETTTTEEEEEEECSSSEE--------E----EEECTTSSEEEEEE
T ss_pred --CCCCccceEECCCCCEEEEEECCCC---EEEEEECCCCeEEEEEeCCCCcc--------e----EEECCCCCEEEEEe
Confidence 2336778999999998777654332 49999999998765544221110 0 1234444 44 444
Q ss_pred ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCce
Q 008274 183 EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGK 262 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~ 262 (571)
..+ ..|+++++.+++.............+ .|+++|+.|+++...++ .|+.+++ .... ....+......
T Consensus 135 ~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~dg~~l~~~~~~~~----~v~~~d~--~~~~---~~~~~~~~~~~ 202 (391)
T 1l0q_A 135 NGD--KTVSVINTVTKAVINTVSVGRSPKGI-AVTPDGTKVYVANFDSM----SISVIDT--VTNS---VIDTVKVEAAP 202 (391)
T ss_dssp TTT--TEEEEEETTTTEEEEEEECCSSEEEE-EECTTSSEEEEEETTTT----EEEEEET--TTTE---EEEEEECSSEE
T ss_pred CCC--CEEEEEECCCCcEEEEEecCCCcceE-EECCCCCEEEEEeCCCC----EEEEEEC--CCCe---EEEEEecCCCc
Confidence 333 47889998777654443332234444 49999999988876554 4666777 2220 22333333344
Q ss_pred EEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 263 HVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 263 ~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
..+.++|+|++++..... ..-..++++++.+++.+..+
T Consensus 203 ~~~~~~~~g~~l~~~~~~-~~~~~v~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 203 SGIAVNPEGTKAYVTNVD-KYFNTVSMIDTGTNKITARI 240 (391)
T ss_dssp EEEEECTTSSEEEEEEEC-SSCCEEEEEETTTTEEEEEE
T ss_pred cceEECCCCCEEEEEecC-cCCCcEEEEECCCCeEEEEE
Confidence 556899999987776542 12358999998777655444
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.9e-10 Score=115.25 Aligned_cols=111 Identities=13% Similarity=0.020 Sum_probs=79.7
Q ss_pred CceEEEEEcCCCCceeecccccccchh-hhHHHHhC-CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDM-RAQYLRSK-GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~-~~~~l~~~-G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
..|+||++||..++.. ..| .. ++..|.++ ||.|+++|+||+|.+........... ..+|+.+.++++.
T Consensus 69 ~~p~vvliHG~~~~~~--~~w----~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~----~~~dl~~~i~~L~ 138 (452)
T 1w52_X 69 SRKTHFVIHGFRDRGE--DSW----PSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRI----VGAETAYLIQQLL 138 (452)
T ss_dssp TSCEEEEECCTTCCSS--SSH----HHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCCC--chH----HHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHH----HHHHHHHHHHHHH
Confidence 4588999999776531 122 22 34566654 99999999999877642111111111 1467788888887
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
++..++.+++.|+|||+||.+|+.++.++|++++.++..+|..
T Consensus 139 ~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 139 TELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred HhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 5533457899999999999999999999999999999987764
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.2e-10 Score=107.73 Aligned_cols=185 Identities=14% Similarity=0.047 Sum_probs=107.7
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|.|+++||.+++.. .|..++..|.+ +.|+.+|++|.+.. ..|+.+.++.+.
T Consensus 17 ~~~l~~~hg~~~~~~-------~~~~~~~~l~~--~~v~~~d~~g~~~~----------------~~~~~~~i~~~~--- 68 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGL-------MYQNLSSRLPS--YKLCAFDFIEEEDR----------------LDRYADLIQKLQ--- 68 (230)
T ss_dssp SEEEEEECCTTCCGG-------GGHHHHHHCTT--EEEEEECCCCSTTH----------------HHHHHHHHHHHC---
T ss_pred CCCEEEECCCCCchH-------HHHHHHHhcCC--CeEEEecCCCHHHH----------------HHHHHHHHHHhC---
Confidence 367889999776532 34445666654 99999999976521 234555554441
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcC---CCeeEEEEEcCccCCcc--cc-----cchhhhhhcCCCCCC-------hhh
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARF---PDVFQCAVSGAPVTSWD--GY-----DTFYTEKYMGLPSED-------PVG 491 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~---~~~~~~~v~~~~~~~~~--~~-----~~~~~~~~~g~~~~~-------~~~ 491 (571)
...++.++|||+||.++..++.+. +..++.++..++..... .. ...........+... ...
T Consensus 69 --~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (230)
T 1jmk_C 69 --PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHG 146 (230)
T ss_dssp --CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHH
T ss_pred --CCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhhhhhhhHHHHHH
Confidence 135799999999999999888764 45677777766532210 00 000000000000000 000
Q ss_pred hc-------cCCc-chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCC--CCCCCCcHHHHHH
Q 008274 492 YE-------YSSV-MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH--MPRRHRDRIYMEE 561 (571)
Q Consensus 492 ~~-------~~s~-~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H--~~~~~~~~~~~~~ 561 (571)
+. .... ......+++|+++++|++|..++. ....+.+ ....+++++.+|+ +| .+ ..++...+.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~w~~---~~~~~~~~~~i~g-~H~~~~-~~~~~~~~~~ 220 (230)
T 1jmk_C 147 LKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPE-WLASWEE---ATTGAYRMKRGFG-THAEML-QGETLDRNAG 220 (230)
T ss_dssp HHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCT-TEECSGG---GBSSCEEEEECSS-CGGGTT-SHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCcc-ccchHHH---hcCCCeEEEEecC-ChHHHc-CcHhHHHHHH
Confidence 00 0000 012356789999999999998872 2111211 1234689999997 88 54 4456677788
Q ss_pred HHHHHHHH
Q 008274 562 RIWEFIER 569 (571)
Q Consensus 562 ~i~~fl~~ 569 (571)
.+.+||.+
T Consensus 221 ~i~~~l~~ 228 (230)
T 1jmk_C 221 ILLEFLNT 228 (230)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhh
Confidence 88888764
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=99.03 E-value=5.1e-10 Score=116.55 Aligned_cols=133 Identities=18% Similarity=0.237 Sum_probs=88.1
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCC-CCChhhhHH
Q 008274 326 ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGT-ARRGLKFEA 403 (571)
Q Consensus 326 ~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~-~~~~~~~~~ 403 (571)
+.|. +...+|.|... ..+++|+||++|||+........ ..+ ....|++ .|++|+++|||.. -|+....
T Consensus 93 ~edc--l~l~v~~P~~~--~~~~~Pviv~iHGGg~~~g~~~~--~~~--~~~~la~~~g~vvv~~nYRlg~~Gf~~~~-- 162 (543)
T 2ha2_A 93 SEDC--LYLNVWTPYPR--PASPTPVLIWIYGGGFYSGAASL--DVY--DGRFLAQVEGAVLVSMNYRVGTFGFLALP-- 162 (543)
T ss_dssp ESCC--CEEEEEEESSC--CSSCEEEEEEECCSTTTCCCTTS--GGG--CTHHHHHHHCCEEEEECCCCHHHHHCCCT--
T ss_pred CCcC--CeEEEeecCCC--CCCCCeEEEEECCCccccCCCCC--CcC--ChHHHHhcCCEEEEEecccccccccccCC--
Confidence 3454 44556677642 23578999999998765432111 111 2456664 8999999999931 1111000
Q ss_pred HHhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccC
Q 008274 404 SIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVT 468 (571)
Q Consensus 404 ~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~ 468 (571)
......+...+.|+.++++|+.+. ...|+++|.|+|+|+||.+++.++... +.+|+++|+.+|..
T Consensus 163 ~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 163 GSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp TCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 000111233478999999999875 347999999999999999998887753 46899999988853
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=4.2e-10 Score=112.70 Aligned_cols=171 Identities=13% Similarity=0.051 Sum_probs=106.3
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCc---EEEEECCCCCCCC----------hhhhHHH----------
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGI---LVWKLDNRGTARR----------GLKFEAS---------- 404 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~---~v~~~d~rG~~~~----------~~~~~~~---------- 404 (571)
+.|.||++||..++.. .|..++..|+++|| .|+++|+||+|.+ |..-...
T Consensus 21 ~~ppVVLlHG~g~s~~-------~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~ 93 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSAG-------QFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPE 93 (484)
T ss_dssp CCCCEEEECCTTCCGG-------GGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHH
T ss_pred CCCEEEEECCCCCCHH-------HHHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccc
Confidence 4577888999876543 35567889999999 6999999998743 0000000
Q ss_pred ----H-hc---cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC---CeeEEEEEcCccCCcccc
Q 008274 405 ----I-KH---NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPVTSWDGY 473 (571)
Q Consensus 405 ----~-~~---~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~---~~~~~~v~~~~~~~~~~~ 473 (571)
. .. .......+++.+.++.+.++. ..+++.++||||||.+++.++.++| ++++++|+.+|..++.
T Consensus 94 ~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~~d-- 169 (484)
T 2zyr_A 94 TLDKILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWGVD-- 169 (484)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCSEE--
T ss_pred cccccccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccccc--
Confidence 0 00 000012456667777776653 3368999999999999999999887 4889999988765421
Q ss_pred cchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCC---CChHHHHHHHHHHHHcCC-CeeEEEcCCCCCC
Q 008274 474 DTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDEN---VHFRHTARLINALVAARK-PYEILIFPDERHM 549 (571)
Q Consensus 474 ~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~---v~~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~ 549 (571)
+ ....++|-+.|..|.. ..+.. .| . ..+.+++++++|.
T Consensus 170 ------------------~----------p~g~~~L~ilG~~d~~p~V~~pss------~L----~~ga~~v~i~~a~H~ 211 (484)
T 2zyr_A 170 ------------------A----------PEGIPTLAVFGNPKALPALGLPEE------KV----VYNATNVYFNNMTHV 211 (484)
T ss_dssp ------------------C----------CTTSCEEEEEECGGGSCCSSCCSS------CC----EETSEEEEETTCCHH
T ss_pred ------------------c----------CcCCHHHHHhCCCCcCCcccChhH------hc----CCCceEEEECCCCcc
Confidence 0 0123556556654431 10110 11 1 3466678999997
Q ss_pred CCCCCcHHHHHHHHHHHHHH
Q 008274 550 PRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 550 ~~~~~~~~~~~~~i~~fl~~ 569 (571)
... . .....+.+.+||..
T Consensus 212 ~ll-~-dp~v~~~Vl~fL~~ 229 (484)
T 2zyr_A 212 QLC-T-SPETFAVMFEFING 229 (484)
T ss_dssp HHH-H-CHHHHHHHHHHHHS
T ss_pred ccc-c-CHHHHHHHHHHhcc
Confidence 522 2 33455678888864
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.9e-09 Score=102.45 Aligned_cols=154 Identities=13% Similarity=0.035 Sum_probs=93.1
Q ss_pred ceEEEEEcCCCCceeecccccccch-hhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVD-MRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
.+.||++||...+.. .. |. .++..|.++||.|+.+|+||+|...... ..+++.+.++.+.+.
T Consensus 65 ~~pVVLvHG~~~~~~--~~----w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~~~-----------~~~~la~~I~~l~~~ 127 (316)
T 3icv_A 65 SKPILLVPGTGTTGP--QS----FDSNWIPLSAQLGYTPCWISPPPFMLNDTQV-----------NTEYMVNAITTLYAG 127 (316)
T ss_dssp SSEEEEECCTTCCHH--HH----HTTTHHHHHHHTTCEEEEECCTTTTCSCHHH-----------HHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCcH--HH----HHHHHHHHHHHCCCeEEEecCCCCCCCcHHH-----------HHHHHHHHHHHHHHH
Confidence 356778999765431 12 33 4678999999999999999986543211 135567777777665
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcC---CCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCc-chhhc-
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARF---PDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSV-MHHVH- 502 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~-~~~~~- 502 (571)
. ..+++.|+||||||.++.+++..+ +++++.+|+.+|...-........ . ++............|+ +..+.
T Consensus 128 ~--g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~Gt~~a~l~~-~-~~~~~~a~~q~~~gS~fl~~Ln~ 203 (316)
T 3icv_A 128 S--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLD-A-LAVSAPSVWQQTTGSALTTALRN 203 (316)
T ss_dssp T--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBSCC--------CCCCHHHHHTBTTCHHHHHHHH
T ss_pred h--CCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCCCchhhhhhh-h-ccccChhHHhhCCCCHHHHHHhh
Confidence 3 346899999999999997777664 589999999887653221111000 0 0000000000111111 11111
Q ss_pred ----cCCCcEEEEecCCCCCCChHH
Q 008274 503 ----KMKGKLLLVHGMIDENVHFRH 523 (571)
Q Consensus 503 ----~~~~p~lli~G~~D~~v~~~~ 523 (571)
.-..|+..|....|.+|.+..
T Consensus 204 ~~~~~~~v~~tsI~S~~D~iV~P~~ 228 (316)
T 3icv_A 204 AGGLTQIVPTTNLYSATDEIVQPQV 228 (316)
T ss_dssp TTTTBCSSCEEEEECTTCSSSCCCC
T ss_pred cCCCCCCCcEEEEEcCCCCCccCCc
Confidence 113689999999999997664
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.00 E-value=1.2e-09 Score=105.63 Aligned_cols=109 Identities=17% Similarity=0.100 Sum_probs=77.1
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
++.|.||++||..+....... ...|..+++.|.++||.|+++|+||++.+.... ...+++.+.++.+.+
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~-~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~----------~~~~~l~~~i~~~l~ 74 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGV-LEYWYGIQEDLQQRGATVYVANLSGFQSDDGPN----------GRGEQLLAYVKTVLA 74 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTT-EESSTTHHHHHHHTTCCEEECCCCSSCCSSSTT----------SHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccch-HHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC----------CCHHHHHHHHHHHHH
Confidence 345778999997665421100 023455788999999999999999988663210 113344444444443
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
.- +.+++.|+||||||.++..++.++|++++++|..++..
T Consensus 75 ~~--~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 75 AT--GATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp HH--CCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred Hh--CCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 31 34689999999999999999999999999999988754
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=98.99 E-value=2e-09 Score=102.67 Aligned_cols=104 Identities=17% Similarity=0.128 Sum_probs=74.2
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
+.|.||++||..+...... ...|..+++.|.++||.|+.+|+||++.+... .+++.+.++.+.+.
T Consensus 6 ~~~~vvlvHG~~~~~~~~~--~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~~~-------------~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILG--VDYWFGIPSALRRDGAQVYVTEVSQLDTSEVR-------------GEQLLQQVEEIVAL 70 (285)
T ss_dssp CSSCEEEECCTTCCSEETT--EESSTTHHHHHHHTTCCEEEECCCSSSCHHHH-------------HHHHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCCccccc--cccHHHHHHHHHhCCCEEEEEeCCCCCCchhh-------------HHHHHHHHHHHHHH
Confidence 4577889999766532110 11345578899999999999999998755311 23333333333332
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
. +.+++.++||||||.++..++.++|++++++|..++..
T Consensus 71 ~--~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 S--GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp H--CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred h--CCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 1 34689999999999999999999999999999988754
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=113.79 Aligned_cols=125 Identities=18% Similarity=0.213 Sum_probs=87.0
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCC----CCChhhhHHHHh
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGT----ARRGLKFEASIK 406 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~----~~~~~~~~~~~~ 406 (571)
|...+|.|.... +++||||++|||+........ ..+ ....|++ .|++|+++|||.. ...... .
T Consensus 93 l~lnv~~P~~~~---~~~Pv~v~iHGGg~~~g~~~~--~~~--~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~-----~ 160 (529)
T 1p0i_A 93 LYLNVWIPAPKP---KNATVLIWIYGGGFQTGTSSL--HVY--DGKFLARVERVIVVSMNYRVGALGFLALPGN-----P 160 (529)
T ss_dssp CEEEEEEESSCC---SSEEEEEEECCSTTTSCCTTC--GGG--CTHHHHHHHCCEEEEECCCCHHHHHCCCTTC-----T
T ss_pred CeEEEeeCCCCC---CCCeEEEEECCCccccCCCCc--ccc--ChHHHhccCCeEEEEecccccccccccCCCC-----C
Confidence 555677886531 578999999998765432211 111 2456665 7999999999932 111000 0
Q ss_pred ccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccC
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVT 468 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~ 468 (571)
...+...+.|+.++++|+.+. ...|+++|.|+|+|+||.+++.++... ..+|+++|+.+|..
T Consensus 161 ~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 161 EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp TSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred CCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 111223478999999999875 347999999999999999999888753 46899999998864
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.98 E-value=9.1e-10 Score=114.38 Aligned_cols=126 Identities=17% Similarity=0.278 Sum_probs=87.7
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCC----CCChhhhHHHHh
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGT----ARRGLKFEASIK 406 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~----~~~~~~~~~~~~ 406 (571)
+...+|.|... .+++||||++|||+........ ..+ ....|+ +.|++|+++|||-. ...... .
T Consensus 95 l~lnv~~P~~~---~~~~Pv~v~iHGG~~~~g~~~~--~~~--~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~-----~ 162 (537)
T 1ea5_A 95 LYLNIWVPSPR---PKSTTVMVWIYGGGFYSGSSTL--DVY--NGKYLAYTEEVVLVSLSYRVGAFGFLALHGS-----Q 162 (537)
T ss_dssp CEEEEEECSSC---CSSEEEEEEECCSTTTCCCTTC--GGG--CTHHHHHHHTCEEEECCCCCHHHHHCCCTTC-----S
T ss_pred CeEEEeccCCC---CCCCeEEEEECCCcccCCCCCC--Ccc--ChHHHHhcCCEEEEEeccCccccccccCCCC-----C
Confidence 55566788653 2678999999998765442221 112 245666 78999999999931 111000 0
Q ss_pred ccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc--CCCeeEEEEEcCccCC
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVTS 469 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~--~~~~~~~~v~~~~~~~ 469 (571)
...+...+.|+.++++|+.+. ...|+++|.|+|+|+||.++..++.. ...+|+++|+.+|...
T Consensus 163 ~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 163 EAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp SSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred CCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 112223478999999999885 34699999999999999999888875 2468999999988643
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=3.6e-07 Score=89.68 Aligned_cols=191 Identities=9% Similarity=0.026 Sum_probs=108.2
Q ss_pred EEEEEECCCCceE-EEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|+++|+++++.. .+....+...-.........+.|+|||+.+++..... ...|+++|+++++.......... .
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~-~-- 186 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK--ESVIWVVDGGNIKLKTAIQNTGK-M-- 186 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS--SCEEEEEETTTTEEEEEECCCCT-T--
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC--CceEEEEcCCCCceEEEecCCCC-c--
Confidence 5788999988764 3333200000000112356789999999766654322 23599999999876543321111 0
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeec-eeec----CeEEEEEEEEeecCcEEEEEEcCCCCc
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGP-ITEG----DWMVEQIVGVNEASGQVYFTGTLDGPL 233 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~-lT~~----~~~~~~~~~~s~dg~~l~~~~~~~~~~ 233 (571)
+ ....+++|+ .+++++.+ ..|+++++.+++... +..+ ......+ .|+|+|+.||+.....
T Consensus 187 ------~--~~~~~s~dg~~l~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~--- 252 (353)
T 3vgz_A 187 ------S--TGLALDSEGKRLYTTNAD--GELITIDTADNKILSRKKLLDDGKEHFFINI-SLDTARQRAFITDSKA--- 252 (353)
T ss_dssp ------C--CCCEEETTTTEEEEECTT--SEEEEEETTTTEEEEEEECCCSSSCCCEEEE-EEETTTTEEEEEESSS---
T ss_pred ------c--ceEEECCCCCEEEEEcCC--CeEEEEECCCCeEEEEEEcCCCCCCcccceE-EECCCCCEEEEEeCCC---
Confidence 0 011334554 55555553 478899988776543 3221 1123334 4999999998876433
Q ss_pred eeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 234 ESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 234 ~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
..++.+++. .+. ....+..... ..+.++|+|+++++.... -..+.++++.+++.+..
T Consensus 253 -~~v~~~d~~-~~~----~~~~~~~~~~-~~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 253 -AEVLVVDTR-NGN----ILAKVAAPES-LAVLFNPARNEAYVTHRQ---AGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp -SEEEEEETT-TCC----EEEEEECSSC-CCEEEETTTTEEEEEETT---TTEEEEEETTTTEEEEE
T ss_pred -CEEEEEECC-CCc----EEEEEEcCCC-ceEEECCCCCEEEEEECC---CCeEEEEECCCCeEEEE
Confidence 467778872 222 2233333222 346899999976554432 24789999877765443
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.97 E-value=6.6e-10 Score=115.81 Aligned_cols=128 Identities=18% Similarity=0.152 Sum_probs=86.0
Q ss_pred EEEEEEcC-----CCCCCCCCC----ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC-CChhhh
Q 008274 332 LYGALYKP-----DESRYGPPP----YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA-RRGLKF 401 (571)
Q Consensus 332 l~~~~~~P-----~~~~~~~~~----~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~-~~~~~~ 401 (571)
|...+|.| ... ..++ +|+||++|||+......... ......|+++|++|+++|||... |+...
T Consensus 91 L~lnv~~P~~~~~~~~--~~~~~~~~~Pviv~iHGGg~~~g~~~~~----~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~- 163 (551)
T 2fj0_A 91 IHANIHVPYYALPRDA--ADKNRFAGLPVLVFIHGGGFAFGSGDSD----LHGPEYLVSKDVIVITFNYRLNVYGFLSL- 163 (551)
T ss_dssp CEEEEEEEGGGCCCC----------CEEEEEEECCSTTTSCCSCTT----TCBCTTGGGGSCEEEEECCCCHHHHHCCC-
T ss_pred eEEEEEecCccccccc--cccCcCCCCCEEEEEcCCccccCCCccc----ccCHHHHHhCCeEEEEeCCcCCccccccC-
Confidence 56667778 331 1233 89999999987654322111 11246677899999999999521 00000
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc--CCCeeEEEEEcCccC
Q 008274 402 EASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVT 468 (571)
Q Consensus 402 ~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~--~~~~~~~~v~~~~~~ 468 (571)
......+...+.|+.++++|+.+. ...|+++|.|+|+|+||.+++.++.. .+.+|+++|+.+|..
T Consensus 164 --~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 164 --NSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp --SSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred --cccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 000112233478999999999876 34699999999999999999988875 367899999988853
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.97 E-value=2.2e-10 Score=119.51 Aligned_cols=133 Identities=17% Similarity=0.198 Sum_probs=84.4
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccc--ccccchhhhHHHH-hCCcEEEEECCCCC-CCChhhhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDS--WINTVDMRAQYLR-SKGILVWKLDNRGT-ARRGLKFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~--~~~~~~~~~~~l~-~~G~~v~~~d~rG~-~~~~~~~~~~~~~ 407 (571)
+...+|.|.......+++||||++|||+........ +...+......|+ ..|++|+++|||-. -++..... ..
T Consensus 81 l~lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~---~~ 157 (579)
T 2bce_A 81 LYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGD---SN 157 (579)
T ss_dssp CEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSS---TT
T ss_pred CEEEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCC---CC
Confidence 555677786532123578999999998765432111 0000111134555 45799999999931 11100000 01
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc--CCCeeEEEEEcCcc
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPV 467 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~--~~~~~~~~v~~~~~ 467 (571)
..+...+.|+.++++|+.+. ...|+++|.|+|+|+||.++..++.. ...+|+++|+.+|.
T Consensus 158 ~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 158 LPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp CCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 11222378999999999875 34799999999999999999888764 35689999988774
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=98.97 E-value=6.5e-10 Score=108.72 Aligned_cols=195 Identities=13% Similarity=0.033 Sum_probs=112.2
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHH-HHHHHHc
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTG-AEWLIKQ 427 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~ 427 (571)
.|.|+++||.+++.. .|..++..| ..++.|+.+|+||.+.+... . ..++++.+. ++.+...
T Consensus 101 ~~~l~~lhg~~~~~~-------~~~~l~~~L-~~~~~v~~~d~~g~~~~~~~-----~-----~~~~~~a~~~~~~i~~~ 162 (329)
T 3tej_A 101 GPTLFCFHPASGFAW-------QFSVLSRYL-DPQWSIIGIQSPRPNGPMQT-----A-----ANLDEVCEAHLATLLEQ 162 (329)
T ss_dssp SCEEEEECCTTSCCG-------GGGGGGGTS-CTTCEEEEECCCTTTSHHHH-----C-----SSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCcccch-------HHHHHHHhc-CCCCeEEEeeCCCCCCCCCC-----C-----CCHHHHHHHHHHHHHHh
Confidence 367889999776533 233345555 56899999999998653210 0 113333332 3333332
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhc---CCCeeEEEEEcCccCCccc---------ccchh-------hhhhc-CCC-C
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLAR---FPDVFQCAVSGAPVTSWDG---------YDTFY-------TEKYM-GLP-S 486 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~---~~~~~~~~v~~~~~~~~~~---------~~~~~-------~~~~~-g~~-~ 486 (571)
. ...++.++||||||.++..++.+ +|+.+..++..++...... ..... ...++ ... .
T Consensus 163 ~--~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (329)
T 3tej_A 163 Q--PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGS 240 (329)
T ss_dssp C--SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCC
T ss_pred C--CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhcccc
Confidence 1 23589999999999999999988 9999999888776543210 00000 00000 000 0
Q ss_pred CChhhh-------ccC-Ccc--hhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC-CCCCCc
Q 008274 487 EDPVGY-------EYS-SVM--HHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM-PRRHRD 555 (571)
Q Consensus 487 ~~~~~~-------~~~-s~~--~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~-~~~~~~ 555 (571)
...+.+ ... ..+ .....+.+|++++.|+.|..++......+.+ .-.+++++.++ ++|. +.....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~----~~~~~~~~~v~-g~H~~~~~~~~ 315 (329)
T 3tej_A 241 TSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSP----WIAELDIYRQD-CAHVDIISPGT 315 (329)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTT----TEEEEEEEEES-SCGGGGGSTTT
T ss_pred ccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHH----hcCCcEEEEec-CChHHhCCChH
Confidence 000110 000 000 0123456799999999998776654333322 22468888898 4775 434445
Q ss_pred HHHHHHHHHHHHH
Q 008274 556 RIYMEERIWEFIE 568 (571)
Q Consensus 556 ~~~~~~~i~~fl~ 568 (571)
...+.+.+.+||.
T Consensus 316 ~~~ia~~l~~~L~ 328 (329)
T 3tej_A 316 FEKIGPIIRATLN 328 (329)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 5677777777764
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.9e-07 Score=91.71 Aligned_cols=168 Identities=7% Similarity=-0.043 Sum_probs=97.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+++|+++++....... .......+.|+|||+.+++... + ..|+.+|+++++..........+.
T Consensus 165 ~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~~~~~-~---~~i~~~d~~~~~~~~~~~~~~~~~--- 229 (353)
T 3vgz_A 165 VIWVVDGGNIKLKTAIQN--------TGKMSTGLALDSEGKRLYTTNA-D---GELITIDTADNKILSRKKLLDDGK--- 229 (353)
T ss_dssp EEEEEETTTTEEEEEECC--------CCTTCCCCEEETTTTEEEEECT-T---SEEEEEETTTTEEEEEEECCCSSS---
T ss_pred eEEEEcCCCCceEEEecC--------CCCccceEEECCCCCEEEEEcC-C---CeEEEEECCCCeEEEEEEcCCCCC---
Confidence 578999998876543210 1222345789999997766543 2 258899999997654433211100
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
...+ ....+++++ .++.++. +-..|+++++.+++. ..+..+.- .. ..|++||+++|++...++ .|+
T Consensus 230 --~~~~--~~~~~s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~~~~~~~~--~~-~~~s~dg~~l~v~~~~~~----~v~ 297 (353)
T 3vgz_A 230 --EHFF--INISLDTARQRAFITDS-KAAEVLVVDTRNGNILAKVAAPES--LA-VLFNPARNEAYVTHRQAG----KVS 297 (353)
T ss_dssp --CCCE--EEEEEETTTTEEEEEES-SSSEEEEEETTTCCEEEEEECSSC--CC-EEEETTTTEEEEEETTTT----EEE
T ss_pred --Cccc--ceEEECCCCCEEEEEeC-CCCEEEEEECCCCcEEEEEEcCCC--ce-EEECCCCCEEEEEECCCC----eEE
Confidence 0000 001234444 4555543 335789999877654 33333321 22 358999999888875543 566
Q ss_pred EEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeC
Q 008274 239 CAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~ 280 (571)
.+++. .+. ....+........+.++|||+++++....
T Consensus 298 ~~d~~-~~~----~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 298 VIDAK-SYK----VVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEETT-TTE----EEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred EEECC-CCe----EEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 77762 221 23334444445567899999987776655
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=98.93 E-value=5.3e-10 Score=108.90 Aligned_cols=197 Identities=12% Similarity=0.036 Sum_probs=108.5
Q ss_pred EEEEEcC--CCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCch----hHHHHHHHH
Q 008274 351 TLISVYG--GPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAE----DQLTGAEWL 424 (571)
Q Consensus 351 ~vv~~hG--g~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~----D~~~~~~~l 424 (571)
.|+++|| +++... .|..++..|. .++.|+.+|+||.+.+..+..... ...++ ++.+.++.+
T Consensus 91 ~l~~~hg~g~~~~~~-------~~~~l~~~L~-~~~~v~~~d~~G~g~~~~~~~~~~-----~~~~~~~a~~~~~~i~~~ 157 (319)
T 2hfk_A 91 VLVGCTGTAANGGPH-------EFLRLSTSFQ-EERDFLAVPLPGYGTGTGTGTALL-----PADLDTALDAQARAILRA 157 (319)
T ss_dssp EEEEECCCCTTCSTT-------TTHHHHHTTT-TTCCEEEECCTTCCBC---CBCCE-----ESSHHHHHHHHHHHHHHH
T ss_pred cEEEeCCCCCCCcHH-------HHHHHHHhcC-CCCceEEecCCCCCCCcccccCCC-----CCCHHHHHHHHHHHHHHh
Confidence 6788997 333321 2344455554 689999999999886410000000 01122 333333322
Q ss_pred HHcCCCcCCcEEEEeechHHHHHHHHHhcC----CCeeEEEEEcCccCCcccc--cch---hhhhhcC---CCCCC--h-
Q 008274 425 IKQGLAKVGHIGLYGWSYGGYLSAITLARF----PDVFQCAVSGAPVTSWDGY--DTF---YTEKYMG---LPSED--P- 489 (571)
Q Consensus 425 ~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~----~~~~~~~v~~~~~~~~~~~--~~~---~~~~~~g---~~~~~--~- 489 (571)
. +..++.++|||+||.++..++.+. ++.++.+++.++....... ..+ ..+..+. .+... .
T Consensus 158 ~-----~~~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 232 (319)
T 2hfk_A 158 A-----GDAPVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLL 232 (319)
T ss_dssp H-----TTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHH
T ss_pred c-----CCCCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHH
Confidence 1 235799999999999999998875 4567888877654321100 000 0000000 00000 0
Q ss_pred --hhhccCCcchhhccCCCcEEEEecCCCCCCChHH-HHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHH
Q 008274 490 --VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRH-TARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEF 566 (571)
Q Consensus 490 --~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 566 (571)
..|...........+++|+++++| .|..++... ...+.+. ...+++++.++ ++|.....++...+.+.+.+|
T Consensus 233 ~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~---~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~ 307 (319)
T 2hfk_A 233 AMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAH---WDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSW 307 (319)
T ss_dssp HHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCC---CSSCSEEEEES-SCTTHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCCccccccchhhc---CCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHHH
Confidence 001000000113567899999999 999888664 3222211 12357888999 589742223778889999999
Q ss_pred HHHh
Q 008274 567 IERT 570 (571)
Q Consensus 567 l~~~ 570 (571)
|++.
T Consensus 308 L~~~ 311 (319)
T 2hfk_A 308 LDAI 311 (319)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9763
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1.7e-09 Score=113.51 Aligned_cols=118 Identities=15% Similarity=0.124 Sum_probs=79.7
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCC----CCCChhhhHH-HHhccCCCCCchhHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRG----TARRGLKFEA-SIKHNCGRIDAEDQLTG 420 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG----~~~~~~~~~~-~~~~~~~~~~~~D~~~~ 420 (571)
+++||||++|||+......... .+ ....|++ .|++|+++|||- .......... ......+...+.|+.++
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~~~--~~--~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~a 214 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSATLD--IY--NADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALA 214 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTTCG--GG--CCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHH
T ss_pred CCCCEEEEECCCcccCCCCCCC--CC--CchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHH
Confidence 5789999999987654422211 11 2345654 799999999992 1111111000 01111223347899999
Q ss_pred HHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccC
Q 008274 421 AEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVT 468 (571)
Q Consensus 421 ~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~ 468 (571)
++|+.+. ...|+++|.|+|+|+||.++..++... ..+|+++|+.+|..
T Consensus 215 l~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 215 IRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 9999886 246999999999999999998887752 46899999988754
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.9e-07 Score=90.39 Aligned_cols=236 Identities=7% Similarity=-0.051 Sum_probs=118.4
Q ss_pred eeeeeeecccceee-eeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEE
Q 008274 5 FHVLQTHGLAEYIA-QEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 83 (571)
Q Consensus 5 ~~~~~~~g~~~~~~-~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 83 (571)
|.++..+|....+. ..+......+.|||||+ |+.+.... . ...|+
T Consensus 21 ~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~-~--------------------------------~~~v~ 66 (347)
T 3hfq_A 21 GTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKED-D--------------------------------EGGIA 66 (347)
T ss_dssp EEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEET-T--------------------------------EEEEE
T ss_pred EEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecC-C--------------------------------CceEE
Confidence 34444445444322 22234567799999999 64443321 1 12578
Q ss_pred EEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECC-CCceEEEEEeecCCeeeccC
Q 008274 84 VVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK-TGQRKVILVEELDSWVNLHD 162 (571)
Q Consensus 84 ~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~-~g~~~~l~~~~~~~w~~~~~ 162 (571)
+||+++++.+.+... .........++|+|||+.+++..... +. |.++|++ +|+.+.+......+-.....
T Consensus 67 ~~~~~~g~~~~~~~~------~~~~~~p~~~a~spdg~~l~~~~~~~-~~--v~v~~~~~~g~~~~~~~~~~~~~~p~~~ 137 (347)
T 3hfq_A 67 AWQIDGQTAHKLNTV------VAPGTPPAYVAVDEARQLVYSANYHK-GT--AEVMKIAADGALTLTDTVQHSGHGPRPE 137 (347)
T ss_dssp EEEEETTEEEEEEEE------EEESCCCSEEEEETTTTEEEEEETTT-TE--EEEEEECTTSCEEEEEEEECCCCCSSTT
T ss_pred EEEecCCcEEEeeee------ecCCCCCEEEEECCCCCEEEEEeCCC-CE--EEEEEeCCCCCeeecceeecCCCCCCcc
Confidence 899988876655331 01123445689999999777665333 33 5555553 55655554322111000000
Q ss_pred CcccCCCCCccCCCeEEEEEecCCccEEEEEeCC-Cceeeceee---c-CeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 163 CFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDIN-GTCLGPITE---G-DWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 163 ~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~-~~~~~~lT~---~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
..........+++|+=++.++. +-..|++++++ +++...+.. . ......+ .|+|||++||++....+ ...+
T Consensus 138 ~~~~~~~~~~~spdg~l~v~~~-~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~-~~spdg~~l~v~~~~~~--~v~v 213 (347)
T 3hfq_A 138 QDGSHIHYTDLTPDNRLAVIDL-GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL-VFSPDGQYAFLAGELSS--QIAS 213 (347)
T ss_dssp CSSCCEEEEEECTTSCEEEEET-TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE-EECTTSSEEEEEETTTT--EEEE
T ss_pred ccCCCceEEEECCCCcEEEEeC-CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE-EECCCCCEEEEEeCCCC--EEEE
Confidence 0000000013445542344443 22356666655 444433321 1 1122333 59999999998876654 3566
Q ss_pred EEEEeCCCCCCCCCCCeEecC-C------CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTN-G------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~-~------~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
|.++. ... .......+.. . .....+.+||||++++..... ...+.++++.
T Consensus 214 ~~~~~--~~g-~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~---~~~v~v~~~~ 270 (347)
T 3hfq_A 214 LKYDT--QTG-AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG---YNTLAVFAVT 270 (347)
T ss_dssp EEEET--TTT-EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET---TTEEEEEEEC
T ss_pred EEecC--CCC-ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC---CCEEEEEEEC
Confidence 66553 111 0001111111 1 224456899999987665443 2467777764
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=98.92 E-value=5e-07 Score=87.91 Aligned_cols=186 Identities=6% Similarity=-0.090 Sum_probs=109.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EE-EEEeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KV-ILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~-l~~~~~~~w~ 158 (571)
.|.++|+++++....... ..... .++|+|||+.++....... .|+.+|+++++. .. +........
T Consensus 21 ~v~~~d~~~~~~~~~~~~--------~~~~~-~~~~s~dg~~l~~~~~~~~---~i~~~d~~~~~~~~~~~~~~~~~~~- 87 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITL--------GYDFV-DTAITSDCSNVVVTSDFCQ---TLVQIETQLEPPKVVAIQEGQSSMA- 87 (331)
T ss_dssp EEEEEETTTCCEEEEEEC--------CCCEE-EEEECSSSCEEEEEESTTC---EEEEEECSSSSCEEEEEEECSSCCC-
T ss_pred eEEEEeCcccceeeeEEc--------cCCcc-eEEEcCCCCEEEEEeCCCC---eEEEEECCCCceeEEecccCCCCcc-
Confidence 578999999887544221 23334 7899999997666654332 699999999985 32 222111111
Q ss_pred eccCCcccCCCCCccCCCe-EEEEEecC-CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 159 NLHDCFTPLDKGVTKYSGG-FIWASEKT-GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~-~~~~s~~~-g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
...+++|+ +++.+... +...|+++++.+++.............+ .|+|||++||+.....+. ...
T Consensus 88 -----------~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~spdg~~l~~~~~~~~~-~i~ 154 (331)
T 3u4y_A 88 -----------DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGI-AISPNGNGLILIDRSSAN-TVR 154 (331)
T ss_dssp -----------CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEE-EECTTSSCEEEEEETTTT-EEE
T ss_pred -----------ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccce-EECCCCCEEEEEecCCCc-eEE
Confidence 01234554 55544333 3348999998877654443322223444 499999998888765441 244
Q ss_pred EEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
+|.++. ++.........+....+.....++|||+++++.... ...++++++.+++.
T Consensus 155 ~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 155 RFKIDA--DGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI---GNSIGILETQNPEN 210 (331)
T ss_dssp EEEECT--TCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT---TTEEEEEECSSTTS
T ss_pred EEEECC--CCcEeecCCccccCCCCccceEECCCCCEEEEEeCC---CCeEEEEECCCCcc
Confidence 555442 332000012233444455667999999987665433 24788999877765
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.91 E-value=4.3e-09 Score=105.67 Aligned_cols=115 Identities=15% Similarity=0.015 Sum_probs=73.9
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHH--hccCCC----CCchhHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI--KHNCGR----IDAEDQLTGA 421 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~--~~~~~~----~~~~D~~~~~ 421 (571)
..|++ ++|||.+.... .+.. .........+.|+.|+.+|+||+|.+...-.... ..+++. ..++|+...+
T Consensus 38 g~Pi~-l~~Ggeg~~~~--~~~~-~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~ 113 (446)
T 3n2z_B 38 GGSIL-FYTGNEGDIIW--FCNN-TGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELI 113 (446)
T ss_dssp TCEEE-EEECCSSCHHH--HHHH-CHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHH
T ss_pred CCCEE-EEeCCCCcchh--hhhc-ccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHH
Confidence 34765 46888775321 1110 0112233345689999999999998742111000 011111 1257788888
Q ss_pred HHHHHc-CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCc
Q 008274 422 EWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAP 466 (571)
Q Consensus 422 ~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~ 466 (571)
+++..+ ......++.++||||||.++++++.++|+++.++|+.++
T Consensus 114 ~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssa 159 (446)
T 3n2z_B 114 KHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASA 159 (446)
T ss_dssp HHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETC
T ss_pred HHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEecc
Confidence 888765 223456899999999999999999999999999887653
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=98.91 E-value=2e-09 Score=108.47 Aligned_cols=113 Identities=12% Similarity=0.033 Sum_probs=77.1
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHH-HhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYL-RSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
...|+||++||...+.. ..|.. .++..| +..+|.|+++|+||+|.+............ .+++.+.+++|.
T Consensus 67 ~~~p~vvliHG~~~s~~--~~w~~---~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v----~~~la~ll~~L~ 137 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGE--ESWLS---TMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIV----GAEVAYLVGVLQ 137 (449)
T ss_dssp TTSEEEEEECCCCCTTC--TTHHH---HHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHH----HHHHHHHHHHHH
T ss_pred CCCCeEEEEecCCCCCC--ccHHH---HHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHH----HHHHHHHHHHHH
Confidence 34589999999665421 12321 133444 467999999999998765421111111111 356777788876
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
++..++.+++.|+||||||.+|..++.++|++++.++...|..
T Consensus 138 ~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 138 SSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred HhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 5433467899999999999999999999999999998877654
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=98.91 E-value=6.6e-07 Score=90.71 Aligned_cols=180 Identities=7% Similarity=-0.117 Sum_probs=108.2
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC----ccEEEEEEECCCCceEEEEEeecCC
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ----TKLKVLKFDIKTGQRKVILVEELDS 156 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~----~~~~i~~~d~~~g~~~~l~~~~~~~ 156 (571)
.|++||+.+++.... + ........+.|+|||+.++....... ....|+++|+.+++...........
T Consensus 235 ~i~~~d~~~~~~~~~-~--------~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 305 (433)
T 3bws_A 235 DISVIDRKTKLEIRK-T--------DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNK 305 (433)
T ss_dssp EEEEEETTTTEEEEE-C--------CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECE
T ss_pred cEEEEECCCCcEEEE-e--------cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCc
Confidence 478899998876433 2 23445788999999997776654332 2447999999998765544322211
Q ss_pred eeeccCCcccCCCCCccCCCe-EEEEE-ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCc-
Q 008274 157 WVNLHDCFTPLDKGVTKYSGG-FIWAS-EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPL- 233 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~d~-~~~~s-~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~- 233 (571)
. .. .+++++ .++.+ ..++ .|+++++.+++..........+..+ .|+|+|+.|++.....+..
T Consensus 306 ~---~~---------~~~~~g~~l~~~~~~~~--~v~v~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~ 370 (433)
T 3bws_A 306 R---HI---------VSGNTENKIYVSDMCCS--KIEVYDLKEKKVQKSIPVFDKPNTI-ALSPDGKYLYVSCRGPNHPT 370 (433)
T ss_dssp E---EE---------EECSSTTEEEEEETTTT--EEEEEETTTTEEEEEEECSSSEEEE-EECTTSSEEEEEECCCCCTT
T ss_pred c---eE---------EECCCCCEEEEEecCCC--EEEEEECCCCcEEEEecCCCCCCeE-EEcCCCCEEEEEecCCCccc
Confidence 0 00 234444 44443 3343 6888888776644333332234444 4999999999888654321
Q ss_pred ---------eeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 234 ---------ESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 234 ---------~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.-.|+.+++. .+. ....+........+.++|+|++++...+.. ..+.++++
T Consensus 371 ~~~~~~g~~dg~v~~~d~~-~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d---~~i~v~~~ 430 (433)
T 3bws_A 371 EGYLKKGLVLGKVYVIDTT-TDT----VKEFWEAGNQPTGLDVSPDNRYLVISDFLD---HQIRVYRR 430 (433)
T ss_dssp TCTTSCCSSCCEEEEEETT-TTE----EEEEEECSSSEEEEEECTTSCEEEEEETTT---TEEEEEEE
T ss_pred cccccccccceEEEEEECC-CCc----EEEEecCCCCCceEEEcCCCCEEEEEECCC---CeEEEEEe
Confidence 2378888872 221 233344334456678999999886654322 36666665
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.3e-08 Score=107.76 Aligned_cols=200 Identities=9% Similarity=0.001 Sum_probs=122.4
Q ss_pred CcccccCCCCCCCCceEEEEEEECCCC-ceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC-ccEEEEEEEC
Q 008274 64 AQEDHAYPFAGASNVKVRLGVVSAAGG-PVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ-TKLKVLKFDI 141 (571)
Q Consensus 64 ~~~~~~y~~~g~~~~~~~l~~~dl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~-~~~~i~~~d~ 141 (571)
+...+.|...........|+++|+++| +...-. .......+.|||||+.|++++.+.. ...+||++++
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~----------~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK----------VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC----------EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc----------ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 333344433322334467999999998 621100 1122346899999998888765433 3358999999
Q ss_pred CCCce--EEEEEeecCCeeeccCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCc--ee--eceeecCeEEEEE
Q 008274 142 KTGQR--KVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGT--CL--GPITEGDWMVEQI 213 (571)
Q Consensus 142 ~~g~~--~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~--~~--~~lT~~~~~~~~~ 213 (571)
.+++. +.+..+....|.. . +.|++|+ +++.+...+..+||+++++++ +. +.|+.+... .
T Consensus 255 gt~~~~~~lv~~~~~~~~~~-~---------~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~---~ 321 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSA-F---------MYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKG---V 321 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEE-E---------EEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTT---C
T ss_pred CCCchhcEEEEecCCCceEE-E---------EEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCC---c
Confidence 99863 4555543333321 0 1345665 666666666789999998875 34 667654311 1
Q ss_pred EEEeec---CcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCe-EecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEE
Q 008274 214 VGVNEA---SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPV-KLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILL 289 (571)
Q Consensus 214 ~~~s~d---g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~-~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~ 289 (571)
.|+++ |+.|||.++.++....+||++++ ++.. .... .++.........++++++++++..... ....|++
T Consensus 322 -~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~--~~~~--~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~-g~~~l~~ 395 (751)
T 2xe4_A 322 -RYDVQMHGTSHLVILTNEGGAVNHKLLIAPR--GQPS--DWSHVLVDHSEDVFMESIAVRSNYLVVAGRRA-GLTRIWT 395 (751)
T ss_dssp -CEEEEEETTTEEEEEECTTTCTTCEEEEEET--TSTT--CCCCEEECCCSSEEEEEEEECSSEEEEEEEET-TEEEEEE
T ss_pred -eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcC--CCcc--cceeeEECCCCCcEEEEEEEECCEEEEEEEeC-CEEEEEE
Confidence 14444 99999999986223589999998 3210 1233 455554444345666677888877653 4568999
Q ss_pred EEc
Q 008274 290 CSL 292 (571)
Q Consensus 290 ~~~ 292 (571)
+++
T Consensus 396 ~dl 398 (751)
T 2xe4_A 396 MMA 398 (751)
T ss_dssp EEC
T ss_pred Eec
Confidence 886
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=98.88 E-value=5.7e-07 Score=88.86 Aligned_cols=167 Identities=9% Similarity=-0.003 Sum_probs=85.0
Q ss_pred eEEEEEccCCeEEEEEEeccCccEEEEEEECCCC----c-eEEE----EEeecCCeeeccCCcccCCCCCccCCCe-EEE
Q 008274 111 LARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTG----Q-RKVI----LVEELDSWVNLHDCFTPLDKGVTKYSGG-FIW 180 (571)
Q Consensus 111 ~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g----~-~~~l----~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~ 180 (571)
...+.|+|||+.+++.. ...+...+|.++..++ + .... ......+.... ...+++|+ +++
T Consensus 157 ~~~~~~spdg~~l~~~~-~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~spdg~~l~ 226 (361)
T 3scy_A 157 LHCVRITPDGKYLLADD-LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPR---------HLIFNSDGKFAY 226 (361)
T ss_dssp EEEEEECTTSSEEEEEE-TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEE---------EEEECTTSSEEE
T ss_pred ceEEEECCCCCEEEEEe-CCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCe---------EEEEcCCCCEEE
Confidence 35689999999776654 3334555666666665 3 2211 11111110000 01345665 555
Q ss_pred EEec-CCccEEEEEeCCCceeeceee------cCeEEEEEEEEeecCcEEEEEEcC-CCCceeEEEEEEeCCCCCCCCCC
Q 008274 181 ASEK-TGFRHLYLHDINGTCLGPITE------GDWMVEQIVGVNEASGQVYFTGTL-DGPLESHLYCAKLYPDWNHTLEA 252 (571)
Q Consensus 181 ~s~~-~g~~~l~~~~~~~~~~~~lT~------~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~~l~~~~l~~~g~~~~~~ 252 (571)
++.. ++ .|+++++++++.+.+.. +......+ .|||||++||++... .+ ...+|.++.. ++.. ..
T Consensus 227 v~~~~~~--~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i-~~spdg~~l~v~~~~~~~--~i~v~~~~~~-~g~~--~~ 298 (361)
T 3scy_A 227 LINEIGG--TVIAFRYADGMLDEIQTVAADTVNAQGSGDI-HLSPDGKYLYASNRLKAD--GVAIFKVDET-NGTL--TK 298 (361)
T ss_dssp EEETTTC--EEEEEEEETTEEEEEEEEESCSSCCCCEEEE-EECTTSSEEEEEECSSSC--EEEEEEECTT-TCCE--EE
T ss_pred EEcCCCC--eEEEEEecCCceEEeEEEecCCCCCCCcccE-EECCCCCEEEEECCCCCC--EEEEEEEcCC-CCcE--EE
Confidence 5543 44 46666655655433322 11112344 499999999877655 33 3667766531 2210 01
Q ss_pred CeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 253 PVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 253 ~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
...+..+.....+.+||||++++...... .--.+|.++..+++
T Consensus 299 ~~~~~~g~~~~~~~~spdg~~l~~~~~~~-~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 299 VGYQLTGIHPRNFIITPNGKYLLVACRDT-NVIQIFERDQATGL 341 (361)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEEEETTT-TEEEEEEECTTTCC
T ss_pred eeEecCCCCCceEEECCCCCEEEEEECCC-CCEEEEEEECCCCc
Confidence 12222222334568999999877654332 22234445655555
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=98.88 E-value=2.9e-09 Score=107.31 Aligned_cols=111 Identities=14% Similarity=0.049 Sum_probs=74.4
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
..|+||++||...+.. ..|. ...+..+.+ .+|.|+++|+||++.+........... ..+++.+.+++|.+
T Consensus 69 ~~p~vvliHG~~~s~~--~~w~---~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~----~a~~l~~ll~~L~~ 139 (450)
T 1rp1_A 69 DKKTRFIIHGFIDKGE--ENWL---LDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRV----VGAQVAQMLSMLSA 139 (450)
T ss_dssp TSEEEEEECCCCCTTC--TTHH---HHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred CCCeEEEEccCCCCCC--cchH---HHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHH----HHHHHHHHHHHHHH
Confidence 4689999999765421 1231 112344444 589999999998765431111111111 14567777777764
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
+..++.+++.|+||||||.+|..++.++|+ ++.++..+|..
T Consensus 140 ~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 140 NYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp HHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred hcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 433467899999999999999999999999 89988877654
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=98.88 E-value=1.5e-07 Score=91.72 Aligned_cols=218 Identities=11% Similarity=-0.016 Sum_probs=118.9
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCC-eEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIP-RFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
....+.|||||++|++........+ .+.. ....|+++|+++++......
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~-------------------------~~~~i~v~d~~~~~~~~~~~----- 132 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEV-------------------------QPTRVALYDAETLSRRKAFE----- 132 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEE-------------------------CCCEEEEEETTTTEEEEEEE-----
T ss_pred cccceEECCCCCEEEEEecccccccccccc-------------------------cCceEEEEECCCCcEEEEEe-----
Confidence 3457899999999877643210000 0000 01368999999887653311
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCC--ccCCCe-E-
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGV--TKYSGG-F- 178 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~--~~~~d~-~- 178 (571)
.......+.|+|||+.+++. + ..|+++|+++++........ .|.. ...|.+..... ....++ +
T Consensus 133 ----~~~~~~~~~~s~dg~~l~~~-~-----~~i~~~d~~~~~~~~~~~~~--~~~~-~~~~s~dg~~l~~~~~~~~~~~ 199 (337)
T 1pby_B 133 ----APRQITMLAWARDGSKLYGL-G-----RDLHVMDPEAGTLVEDKPIQ--SWEA-ETYAQPDVLAVWNQHESSGVMA 199 (337)
T ss_dssp ----CCSSCCCEEECTTSSCEEEE-S-----SSEEEEETTTTEEEEEECST--TTTT-TTBCCCBCCCCCCCCTTTTEEE
T ss_pred ----CCCCcceeEECCCCCEEEEe-C-----CeEEEEECCCCcEeeeeecc--ccCC-CceeCCCccEEeeeccCCCcee
Confidence 12233457899999976666 2 13999999999765433211 1100 00111111000 000111 1
Q ss_pred -EEEEec-CC--------ccEEEEEeCCCceeeceeec--CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCC
Q 008274 179 -IWASEK-TG--------FRHLYLHDINGTCLGPITEG--DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDW 246 (571)
Q Consensus 179 -~~~s~~-~g--------~~~l~~~~~~~~~~~~lT~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g 246 (571)
.+.... .+ ...|+++++.+++...++.. ......+ .|+|||++||+. ...|+.+++. .+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~-------~~~v~~~d~~-~~ 270 (337)
T 1pby_B 200 TPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFST-AVNPAKTRAFGA-------YNVLESFDLE-KN 270 (337)
T ss_dssp EEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEE-EECTTSSEEEEE-------ESEEEEEETT-TT
T ss_pred eeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeE-EECCCCCEEEEe-------CCeEEEEECC-CC
Confidence 111110 00 12688999888766533321 1122333 599999999887 2567788872 22
Q ss_pred CCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 247 NHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 247 ~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
. ....+........+.++|||++++.. +. ...+.++++.+++.+..+
T Consensus 271 ~----~~~~~~~~~~~~~~~~s~dg~~l~~~-~~---~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 271 A----SIKRVPLPHSYYSVNVSTDGSTVWLG-GA---LGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp E----EEEEEECSSCCCEEEECTTSCEEEEE-SB---SSEEEEEETTTCCEEEEE
T ss_pred c----CcceecCCCceeeEEECCCCCEEEEE-cC---CCcEEEEECcCCcEEEEE
Confidence 1 22334333344567999999977664 22 358999999888766555
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=98.86 E-value=2e-09 Score=104.49 Aligned_cols=114 Identities=11% Similarity=0.018 Sum_probs=76.4
Q ss_pred eEEEEEcCCCCcee-------ecccccccchhhhHHHHhCCcE---EEEECCCCCCCChhhhHHHHhccCCCCCchhHHH
Q 008274 350 KTLISVYGGPCVQL-------VCDSWINTVDMRAQYLRSKGIL---VWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLT 419 (571)
Q Consensus 350 P~vv~~hGg~~~~~-------~~~~~~~~~~~~~~~l~~~G~~---v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~ 419 (571)
+.||++||...... ....|......+++.|.++||. |+.+|+||++.+.... .........+++.+
T Consensus 41 ~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~----~~~~~~~~~~~l~~ 116 (342)
T 2x5x_A 41 TPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQ----YNYHSSTKYAIIKT 116 (342)
T ss_dssp CCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGG----GCCBCHHHHHHHHH
T ss_pred CeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCcc----ccCCHHHHHHHHHH
Confidence 34777999766421 0112210015578899999998 9999999876432110 00001112566777
Q ss_pred HHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccCC
Q 008274 420 GAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVTS 469 (571)
Q Consensus 420 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~~ 469 (571)
.++.+.++. ..+++.|+||||||.++..++.++ |++++.+|+.+|...
T Consensus 117 ~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 117 FIDKVKAYT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 777776642 346899999999999999999988 899999999887543
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=98.85 E-value=8.2e-07 Score=87.13 Aligned_cols=166 Identities=12% Similarity=0.081 Sum_probs=84.7
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECC-CCceEEEEEeec-CCeeeccCCcccCCCCCccCCCe-EEEEE-ecC
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK-TGQRKVILVEEL-DSWVNLHDCFTPLDKGVTKYSGG-FIWAS-EKT 185 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~-~g~~~~l~~~~~-~~w~~~~~~~~~~~~~~~~~~d~-~~~~s-~~~ 185 (571)
....+.|+|||+ ++. .+...+ .|+++|++ +|+...+..... .+.... ...+++|+ +++++ ...
T Consensus 142 ~~~~~~~spdg~-l~v-~~~~~~--~v~~~~~~~~g~~~~~~~~~~~~g~~p~---------~~~~spdg~~l~v~~~~~ 208 (347)
T 3hfq_A 142 HIHYTDLTPDNR-LAV-IDLGSD--KVYVYNVSDAGQLSEQSVLTMEAGFGPR---------HLVFSPDGQYAFLAGELS 208 (347)
T ss_dssp CEEEEEECTTSC-EEE-EETTTT--EEEEEEECTTSCEEEEEEEECCTTCCEE---------EEEECTTSSEEEEEETTT
T ss_pred CceEEEECCCCc-EEE-EeCCCC--EEEEEEECCCCcEEEeeeEEcCCCCCCc---------eEEECCCCCEEEEEeCCC
Confidence 456689999999 443 444333 36666766 676555433211 110000 01345555 44444 445
Q ss_pred CccEEEEEeCCCceeeceee---c--C----eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe
Q 008274 186 GFRHLYLHDINGTCLGPITE---G--D----WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL 256 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~---~--~----~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l 256 (571)
+.-.+|.++..+++.+.+.. . . .....+ .|+|||++||++...++ ...+|.++. ++.. .....+
T Consensus 209 ~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i-~~spdG~~l~v~~~~~~--~v~v~~~~~--~g~~--~~~~~~ 281 (347)
T 3hfq_A 209 SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAI-RLSHDGHFLYVSNRGYN--TLAVFAVTA--DGHL--TLIQQI 281 (347)
T ss_dssp TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEE-EECTTSCEEEEEEETTT--EEEEEEECG--GGCE--EEEEEE
T ss_pred CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeE-EECCCCCEEEEEeCCCC--EEEEEEECC--CCcE--EEeEEE
Confidence 54456666654555433321 0 1 223444 49999999998876554 255555542 3310 122223
Q ss_pred cC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 257 TN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 257 t~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
.. +.....+.+||||++++..... ...-.+|.++..+++
T Consensus 282 ~~~~~~~~~~~~spdg~~l~v~~~~-~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 282 STEGDFPRDFDLDPTEAFVVVVNQN-TDNATLYARDLTSGK 321 (347)
T ss_dssp ECSSSCCCEEEECTTSSEEEEEETT-TTEEEEEEECTTTCC
T ss_pred ecCCCCcCeEEECCCCCEEEEEEcC-CCcEEEEEEeCCCCe
Confidence 32 2223456899999987665433 222233434554454
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=5.1e-09 Score=109.61 Aligned_cols=123 Identities=20% Similarity=0.281 Sum_probs=83.2
Q ss_pred EEEEEEcCCCCCC--CCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCCC----CChhhhHHH
Q 008274 332 LYGALYKPDESRY--GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGTA----RRGLKFEAS 404 (571)
Q Consensus 332 l~~~~~~P~~~~~--~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~~----~~~~~~~~~ 404 (571)
|...+|.|..... ..+++||||++|||+........+ . ...|++ .|++|+++|||-.. ..+.
T Consensus 112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~----~--~~~la~~~~~vvv~~~YRl~~~Gfl~~~~----- 180 (574)
T 3bix_A 112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLY----D--GSVLASYGNVIVITVNYRLGVLGFLSTGD----- 180 (574)
T ss_dssp CEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGS----C--CHHHHHHHTCEEEEECCCCHHHHHCCCSS-----
T ss_pred CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCcc----C--chhhhccCCEEEEEeCCcCcccccCcCCC-----
Confidence 5667788865311 125789999999997665432222 2 244555 47999999999321 1110
Q ss_pred HhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCC---CeeEEEEEcCc
Q 008274 405 IKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAP 466 (571)
Q Consensus 405 ~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~---~~~~~~v~~~~ 466 (571)
....+...+.|+.++++|+.+. ...|+++|.|+|+|+||.++..++.... .+|+++|+.+|
T Consensus 181 -~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg 247 (574)
T 3bix_A 181 -QAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSG 247 (574)
T ss_dssp -SSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESC
T ss_pred -CCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcC
Confidence 0011223478999999999885 3469999999999999999998887543 57999998775
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=98.78 E-value=7e-07 Score=88.49 Aligned_cols=196 Identities=10% Similarity=0.017 Sum_probs=108.6
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
+.++|||||+++|..+.... ..|.+||+++++.... +.
T Consensus 137 ~~v~fSpDg~~la~as~~~d----------------------------------~~i~iwd~~~~~~~~~-~~------- 174 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSKVP----------------------------------AIMRIIDPSDLTEKFE-IE------- 174 (365)
T ss_dssp EEEEECTTSSCEEEEESCSS----------------------------------CEEEEEETTTTEEEEE-EE-------
T ss_pred EEEEEcCCCCEEEEEECCCC----------------------------------CEEEEeECCCCcEEEE-eC-------
Confidence 45889999999987653211 1478899998876543 21
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-CeeeccCCcccCCCCCccCCCe-EEEE-E
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVNLHDCFTPLDKGVTKYSGG-FIWA-S 182 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~~~~~~~~~~~~~~~~~d~-~~~~-s 182 (571)
....+..++|||||++++...... +.+++..+|+.......... ..+. .+ .+++++ +++. +
T Consensus 175 -~~~~V~~v~fspdg~~l~s~s~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~------~v----~fspdg~~l~~~s 238 (365)
T 4h5i_A 175 -TRGEVKDLHFSTDGKVVAYITGSS-----LEVISTVTGSCIARKTDFDKNWSLS------KI----NFIADDTVLIAAS 238 (365)
T ss_dssp -CSSCCCEEEECTTSSEEEEECSSC-----EEEEETTTCCEEEEECCCCTTEEEE------EE----EEEETTEEEEEEE
T ss_pred -CCCceEEEEEccCCceEEecccee-----EEEEEeccCcceeeeecCCCCCCEE------EE----EEcCCCCEEEEEe
Confidence 334577899999999888775322 77888888875432211111 1111 11 123443 3333 3
Q ss_pred ecC-CccEEEEEeCCCcee-----eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe
Q 008274 183 EKT-GFRHLYLHDINGTCL-----GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL 256 (571)
Q Consensus 183 ~~~-g~~~l~~~~~~~~~~-----~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l 256 (571)
... ....++.++...... ..+......+..+ .|||||++|+..+.+.. ..| +++. .+. ....+
T Consensus 239 ~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~-~~Spdg~~lasgs~D~~---V~i--wd~~-~~~----~~~~~ 307 (365)
T 4h5i_A 239 LKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSM-DVDMKGELAVLASNDNS---IAL--VKLK-DLS----MSKIF 307 (365)
T ss_dssp ESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEE-EECTTSCEEEEEETTSC---EEE--EETT-TTE----EEEEE
T ss_pred cCCcceeEEeecccccceecceeeeeecCCCCCeEeE-EECCCCCceEEEcCCCE---EEE--EECC-CCc----EEEEe
Confidence 332 223455555444332 2233333345555 49999998776654332 444 4552 221 22222
Q ss_pred cC--CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCC
Q 008274 257 TN--GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 294 (571)
Q Consensus 257 t~--~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~ 294 (571)
.. ......+.|||||++|+ +.+... .+.+.+++.
T Consensus 308 ~~gH~~~V~~v~fSpdg~~la-S~S~D~---tvrvw~ip~ 343 (365)
T 4h5i_A 308 KQAHSFAITEVTISPDSTYVA-SVSAAN---TIHIIKLPL 343 (365)
T ss_dssp TTSSSSCEEEEEECTTSCEEE-EEETTS---EEEEEECCT
T ss_pred cCcccCCEEEEEECCCCCEEE-EEeCCC---eEEEEEcCC
Confidence 22 23355679999998765 344433 577777643
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=98.78 E-value=6.6e-06 Score=79.79 Aligned_cols=179 Identities=7% Similarity=-0.046 Sum_probs=103.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.+||+.+++....... ......+..+.|+||++.++...... .|.++|+.+++.......... .+.
T Consensus 120 ~i~~~d~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~l~~~~~dg----~v~~~d~~~~~~~~~~~~~~~-~i~- 187 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAEL------TSSAPACYALAISPDSKVCFSCCSDG----NIAVWDLHNQTLVRQFQGHTD-GAS- 187 (337)
T ss_dssp EEEEEECCCC--EEEEEE------ECSSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTTEEEEEECCCSS-CEE-
T ss_pred cEEEEECCCCCcceeeec------ccCCCceEEEEECCCCCEEEEEeCCC----cEEEEeCCCCceeeeeecccC-ceE-
Confidence 478899988764322111 22345677899999999877665433 388999998875443322111 110
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
.+ .+++++ +++....+| .|+++++.+++..........+..+ .|+|+++.|+..+... .++.
T Consensus 188 -----~~----~~~~~~~~l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~~~~~~~-----~i~~ 250 (337)
T 1gxr_A 188 -----CI----DISNDGTKLWTGGLDN--TVRSWDLREGRQLQQHDFTSQIFSL-GYCPTGEWLAVGMESS-----NVEV 250 (337)
T ss_dssp -----EE----EECTTSSEEEEEETTS--EEEEEETTTTEEEEEEECSSCEEEE-EECTTSSEEEEEETTS-----CEEE
T ss_pred -----EE----EECCCCCEEEEEecCC--cEEEEECCCCceEeeecCCCceEEE-EECCCCCEEEEEcCCC-----cEEE
Confidence 00 234444 555555554 5777887776654333333345555 4999999888776433 2445
Q ss_pred EEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCcee
Q 008274 240 AKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLV 298 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~ 298 (571)
+++ ... ....+.. ......+.++|++++++..... ..+.+.++.+++..
T Consensus 251 ~~~--~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 251 LHV--NKP----DKYQLHLHESCVLSLKFAYCGKWFVSTGKD----NLLNAWRTPYGASI 300 (337)
T ss_dssp EET--TSS----CEEEECCCSSCEEEEEECTTSSEEEEEETT----SEEEEEETTTCCEE
T ss_pred EEC--CCC----CeEEEcCCccceeEEEECCCCCEEEEecCC----CcEEEEECCCCeEE
Confidence 565 222 2334433 2335566899999987654332 37888887666543
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.6e-06 Score=87.91 Aligned_cols=187 Identities=8% Similarity=-0.060 Sum_probs=113.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|++||+++++....-. ........+.|+|||+.++.....++ .|+++|+.+++....... .....
T Consensus 192 ~v~~~d~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~---~i~~~d~~~~~~~~~~~~--~~~~~- 257 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVD--------LTGKWSKILLYDPIRDLVYCSNWISE---DISVIDRKTKLEIRKTDK--IGLPR- 257 (433)
T ss_dssp EEEEEETTTCCEEEEEE--------CSSSSEEEEEEETTTTEEEEEETTTT---EEEEEETTTTEEEEECCC--CSEEE-
T ss_pred EEEEEECCCceEEEEEc--------CCCCCeeEEEEcCCCCEEEEEecCCC---cEEEEECCCCcEEEEecC--CCCce-
Confidence 57899999876543311 13446778899999997766543332 599999999875433221 11110
Q ss_pred cCCcccCCCCCccCCCe-EEEEEec-C-----CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCc
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEK-T-----GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPL 233 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~-~-----g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 233 (571)
. ..+++++ .++.+.. . +-..|+++++.+++..........+..+ .|+|+++.+|++...++
T Consensus 258 -----~----~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~g~~l~~~~~~~~-- 325 (433)
T 3bws_A 258 -----G----LLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHI-VSGNTENKIYVSDMCCS-- 325 (433)
T ss_dssp -----E----EEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEE-EECSSTTEEEEEETTTT--
T ss_pred -----E----EEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceE-EECCCCCEEEEEecCCC--
Confidence 0 1234444 4444332 2 2357999998877654443222233444 49999999999987654
Q ss_pred eeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCC-----------CEEEEEEcCCCceeEe
Q 008274 234 ESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSP-----------PRILLCSLQDGSLVLP 300 (571)
Q Consensus 234 ~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p-----------~~l~~~~~~~~~~~~~ 300 (571)
.++.+++. .+. ....+........+.++|+|++++........+ ..++++++.+++.+..
T Consensus 326 --~v~v~d~~-~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 326 --KIEVYDLK-EKK----VQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp --EEEEEETT-TTE----EEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred --EEEEEECC-CCc----EEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 45666662 221 233444444566779999999877665543322 4888888876664433
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=98.72 E-value=2.5e-07 Score=90.03 Aligned_cols=208 Identities=11% Similarity=-0.008 Sum_probs=118.5
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEE-EeccCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSW-MDLQCGGTD 103 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~-~~~~~~~~~ 103 (571)
...+.|||||++++++... . ..|+++|+++++... +.....
T Consensus 36 ~~~~~~s~dg~~l~v~~~~-~----------------------------------~~v~~~d~~~~~~~~~~~~~~~--- 77 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNK-S----------------------------------ESLVKIDLVTGETLGRIDLSTP--- 77 (337)
T ss_dssp CCCEEECTTSSEEEEEETT-T----------------------------------TEEEEEETTTCCEEEEEECCBT---
T ss_pred ccceEEcCCCCEEEEEeCC-C----------------------------------CeEEEEECCCCCeEeeEEcCCc---
Confidence 5689999999988664321 1 157889999887653 333100
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEec-----cC---ccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCC
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNR-----SQ---TKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS 175 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r-----~~---~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~ 175 (571)
.........+.|+|||+.+++.... .. ....|+++|+++++.......... + ....+++
T Consensus 78 -~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~----------~--~~~~~s~ 144 (337)
T 1pby_B 78 -EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ----------I--TMLAWAR 144 (337)
T ss_dssp -TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS----------C--CCEEECT
T ss_pred -ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC----------c--ceeEECC
Confidence 0000123457999999977766422 11 124699999999876543332111 0 0012345
Q ss_pred Ce-EEEEEecCCccEEEEEeCCCceeec-eeecCeEEEEEEEEeecCcEEEEEEcCCCCc-------------------e
Q 008274 176 GG-FIWASEKTGFRHLYLHDINGTCLGP-ITEGDWMVEQIVGVNEASGQVYFTGTLDGPL-------------------E 234 (571)
Q Consensus 176 d~-~~~~s~~~g~~~l~~~~~~~~~~~~-lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~-------------------~ 234 (571)
|+ .++.++ ..|+++++.+++... +..+.+.. ...|+|||+.|++.....+.. .
T Consensus 145 dg~~l~~~~----~~i~~~d~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (337)
T 1pby_B 145 DGSKLYGLG----RDLHVMDPEAGTLVEDKPIQSWEA--ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYR 218 (337)
T ss_dssp TSSCEEEES----SSEEEEETTTTEEEEEECSTTTTT--TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEE
T ss_pred CCCEEEEeC----CeEEEEECCCCcEeeeeeccccCC--CceeCCCccEEeeeccCCCceeeeeeccccccccccccccc
Confidence 54 444442 358999988776543 32222111 225899999887765443310 0
Q ss_pred eEEEEEEeCCCCCCCCCCCeEec---CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 235 SHLYCAKLYPDWNHTLEAPVKLT---NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 235 ~~l~~~~l~~~g~~~~~~~~~lt---~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
..|+.+++ ... +...++ .......+.++|||++++.. . ..++++++.+++.+..+
T Consensus 219 ~~v~~~d~--~~~----~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~-----~~v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 219 TGLLTMDL--ETG----EMAMREVRIMDVFYFSTAVNPAKTRAFGA-Y-----NVLESFDLEKNASIKRV 276 (337)
T ss_dssp EEEEEEET--TTC----CEEEEEEEECSSCEEEEEECTTSSEEEEE-E-----SEEEEEETTTTEEEEEE
T ss_pred cceEEEeC--CCC----CceEeecCCCCCceeeEEECCCCCEEEEe-C-----CeEEEEECCCCcCccee
Confidence 15677777 222 222221 11234457999999987665 2 48999998777655444
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=98.69 E-value=8.1e-07 Score=86.94 Aligned_cols=71 Identities=8% Similarity=-0.106 Sum_probs=45.7
Q ss_pred EEee-cCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 215 GVNE-ASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 215 ~~s~-dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
.++| ||+.+|+. ...|+.+++. .+. ....+........+.+++||++++.. +. -..+.++++.
T Consensus 261 ~~sp~dg~~l~~~-------~~~v~~~d~~-~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~--~~--~~~v~v~d~~ 324 (349)
T 1jmx_B 261 LRSPKDPNQIYGV-------LNRLAKYDLK-QRK----LIKAANLDHTYYCVAFDKKGDKLYLG--GT--FNDLAVFNPD 324 (349)
T ss_dssp EECSSCTTEEEEE-------ESEEEEEETT-TTE----EEEEEECSSCCCEEEECSSSSCEEEE--SB--SSEEEEEETT
T ss_pred EecCCCCCEEEEE-------cCeEEEEECc-cCe----EEEEEcCCCCccceEECCCCCEEEEe--cC--CCeEEEEecc
Confidence 3678 99988877 2468888872 221 22334333334567999999887663 21 2689999987
Q ss_pred CCceeEec
Q 008274 294 DGSLVLPL 301 (571)
Q Consensus 294 ~~~~~~~l 301 (571)
+++.++.+
T Consensus 325 ~~~~~~~~ 332 (349)
T 1jmx_B 325 TLEKVKNI 332 (349)
T ss_dssp TTEEEEEE
T ss_pred ccceeeee
Confidence 77765554
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=98.67 E-value=9.4e-06 Score=80.28 Aligned_cols=119 Identities=8% Similarity=0.004 Sum_probs=63.8
Q ss_pred cCCCe-EEEEEecCCccEEEEEeCC-Cceeeceee-----cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCC
Q 008274 173 KYSGG-FIWASEKTGFRHLYLHDIN-GTCLGPITE-----GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPD 245 (571)
Q Consensus 173 ~~~d~-~~~~s~~~g~~~l~~~~~~-~~~~~~lT~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~ 245 (571)
+++|+ +++.++. |...|++++.+ +++.+.+.. .......+ .|+|||++||+.....+ ...+|.++.. .
T Consensus 152 ~spdG~~l~~~~~-~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~-~~spdg~~l~v~~~~~~--~v~v~~~~~~-~ 226 (365)
T 1jof_A 152 FDPTETYLYSADL-TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWV-AMHPTGNYLYALMEAGN--RICEYVIDPA-T 226 (365)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEE-EECTTSSEEEEEETTTT--EEEEEEECTT-T
T ss_pred ECCCCCEEEEEcC-CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEe-EECCCCCEEEEEECCCC--eEEEEEEeCC-C
Confidence 45665 6666654 34578888876 565443321 12224444 49999999988865444 3666666541 2
Q ss_pred CCCCC--CCCeEecCC----C-------ceEEEE-ECCCCCEEEEEeeCC--CCCCEEEEEEcC-CCc
Q 008274 246 WNHTL--EAPVKLTNG----K-------GKHVAV-LDHNMRNFVDFHDSL--DSPPRILLCSLQ-DGS 296 (571)
Q Consensus 246 g~~~~--~~~~~lt~~----~-------g~~~~~-~s~~g~~~v~~~s~~--~~p~~l~~~~~~-~~~ 296 (571)
|.... .....++.. . ....+. +||||++++...... ..+..+.++++. +++
T Consensus 227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC
T ss_pred CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC
Confidence 21000 000112111 1 234568 999999875443222 224478888874 444
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=98.66 E-value=1.3e-08 Score=97.07 Aligned_cols=94 Identities=15% Similarity=0.001 Sum_probs=59.6
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|.||++||.+++.. .|..++..|. +.|+.+|+++... ...++++.+.+..++..-
T Consensus 24 ~~~l~~~hg~~~~~~-------~~~~~~~~L~---~~v~~~d~~~~~~--------------~~~~~~~a~~~~~~i~~~ 79 (283)
T 3tjm_A 24 ERPLFLVHPIEGSTT-------VFHSLASRLS---IPTYGLQCTRAAP--------------LDSIHSLAAYYIDCIRQV 79 (283)
T ss_dssp SCCEEEECCTTCCSG-------GGHHHHHHCS---SCEEEECCCTTSC--------------CSCHHHHHHHHHHHHTTT
T ss_pred CCeEEEECCCCCCHH-------HHHHHHHhcC---ceEEEEecCCCCC--------------CCCHHHHHHHHHHHHHHh
Confidence 456788999877543 3444455554 9999999974221 112333333332222221
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcC---CCeeE---EEEEcCcc
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARF---PDVFQ---CAVSGAPV 467 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~---~~~~~---~~v~~~~~ 467 (571)
....++.++||||||.++..++.+. |+.+. .++..++.
T Consensus 80 -~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~ 123 (283)
T 3tjm_A 80 -QPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 123 (283)
T ss_dssp -CCSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCC
T ss_pred -CCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCC
Confidence 1236899999999999999988754 77777 77776654
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=98.66 E-value=1.9e-05 Score=76.03 Aligned_cols=204 Identities=11% Similarity=0.089 Sum_probs=120.4
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|||||++|+....+ + .+.+|++.+++.... +
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~d-g-----------------------------------~i~iw~~~~~~~~~~-~----- 61 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSAD-K-----------------------------------LIKIWGAYDGKFEKT-I----- 61 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETT-S-----------------------------------CEEEEETTTCCEEEE-E-----
T ss_pred CcEEEEEECCCCCEEEEeeCC-C-----------------------------------eEEEEeCCCcccchh-h-----
Confidence 345678999999988764322 1 257788887765433 2
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWA 181 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~ 181 (571)
......+..+.|+|||+.++...... .|.+.|+++++.......... .+. .+ .+++++ +++.
T Consensus 62 --~~h~~~v~~~~~~~~~~~l~s~~~d~----~i~vwd~~~~~~~~~~~~~~~-~v~------~~----~~~~~~~~l~s 124 (312)
T 4ery_A 62 --SGHKLGISDVAWSSDSNLLVSASDDK----TLKIWDVSSGKCLKTLKGHSN-YVF------CC----NFNPQSNLIVS 124 (312)
T ss_dssp --CCCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTCCEEEEEECCSS-CEE------EE----EECSSSSEEEE
T ss_pred --ccCCCceEEEEEcCCCCEEEEECCCC----EEEEEECCCCcEEEEEcCCCC-CEE------EE----EEcCCCCEEEE
Confidence 23455678899999999877765433 488889999886543332111 110 00 123443 5555
Q ss_pred EecCCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC-
Q 008274 182 SEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG- 259 (571)
Q Consensus 182 s~~~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~- 259 (571)
...+| .|.++++.+++ ...+......+..+ .|+++++.|+..+. ++ .+...++. .+. ....+...
T Consensus 125 ~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~-d~----~i~~wd~~-~~~----~~~~~~~~~ 191 (312)
T 4ery_A 125 GSFDE--SVRIWDVKTGKCLKTLPAHSDPVSAV-HFNRDGSLIVSSSY-DG----LCRIWDTA-SGQ----CLKTLIDDD 191 (312)
T ss_dssp EETTS--CEEEEETTTCCEEEEECCCSSCEEEE-EECTTSSEEEEEET-TS----CEEEEETT-TCC----EEEEECCSS
T ss_pred EeCCC--cEEEEECCCCEEEEEecCCCCcEEEE-EEcCCCCEEEEEeC-CC----cEEEEECC-CCc----eeeEEeccC
Confidence 55555 36667766554 34444444345555 49999987765544 33 24444552 121 22233222
Q ss_pred -CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 260 -KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 260 -~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.......++|++++++..... ..+.+.++.+++.++.+.
T Consensus 192 ~~~~~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~ 231 (312)
T 4ery_A 192 NPPVSFVKFSPNGKYILAATLD----NTLKLWDYSKGKCLKTYT 231 (312)
T ss_dssp CCCEEEEEECTTSSEEEEEETT----TEEEEEETTTTEEEEEEC
T ss_pred CCceEEEEECCCCCEEEEEcCC----CeEEEEECCCCcEEEEEE
Confidence 234456899999987764433 378888987777655543
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.6e-08 Score=100.89 Aligned_cols=116 Identities=12% Similarity=-0.020 Sum_probs=69.7
Q ss_pred CceEEEEEcCCCCcee-----ecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH---Hhc---cC-------
Q 008274 348 PYKTLISVYGGPCVQL-----VCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS---IKH---NC------- 409 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~-----~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~---~~~---~~------- 409 (571)
..|.||++||..+... ....|...+..+++.|.++||.|+++|+||+|.+....... ... ..
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~ 130 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEK 130 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccccc
Confidence 3456788999765421 01233211124678899999999999999998654221110 000 00
Q ss_pred --CCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc--------------------------CCCeeEEE
Q 008274 410 --GRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR--------------------------FPDVFQCA 461 (571)
Q Consensus 410 --~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~--------------------------~~~~~~~~ 461 (571)
-....+|+.+.++.+ . ...++.|+||||||.++..++.. +|++++.+
T Consensus 131 ~~~~~~a~dl~~ll~~l---~--~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~sl 205 (431)
T 2hih_A 131 YGHERYGKTYEGVLKDW---K--PGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSI 205 (431)
T ss_dssp HTCCSEEEEECCSCTTC---B--TTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEE
T ss_pred CCHHHHHHHHHHHHHHh---C--CCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEE
Confidence 000112222222111 0 13689999999999999998765 68899999
Q ss_pred EEcCccC
Q 008274 462 VSGAPVT 468 (571)
Q Consensus 462 v~~~~~~ 468 (571)
+++++..
T Consensus 206 v~i~tP~ 212 (431)
T 2hih_A 206 TTIATPH 212 (431)
T ss_dssp EEESCCT
T ss_pred EEECCCC
Confidence 9887654
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=98.65 E-value=1.3e-05 Score=79.32 Aligned_cols=80 Identities=6% Similarity=-0.002 Sum_probs=54.4
Q ss_pred EEEeecCcEEEEEEcCCCC-----ceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEE
Q 008274 214 VGVNEASGQVYFTGTLDGP-----LESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRIL 288 (571)
Q Consensus 214 ~~~s~dg~~l~~~~~~~~~-----~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~ 288 (571)
..+++|++.+|........ ....|+.+|+ ... .....+.-+.......+|+||++++|+..... ..+.
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~--~t~---~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~--~~V~ 344 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG--LVG---QTSSQISLGHDVDAISVAQDGGPDLYALSAGT--EVLH 344 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEEC--CCC---EEEEEEECCCCcCeEEECCCCCeEEEEEcCCC--CeEE
Confidence 4589999999998753211 1357999998 322 03355654444567799999997777765322 4899
Q ss_pred EEEcCCCceeEe
Q 008274 289 LCSLQDGSLVLP 300 (571)
Q Consensus 289 ~~~~~~~~~~~~ 300 (571)
++|+.+++.++.
T Consensus 345 ViD~~t~~vv~~ 356 (373)
T 2mad_H 345 IYDAGAGDQDQS 356 (373)
T ss_pred EEECCCCCEEee
Confidence 999988887665
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=98.64 E-value=6e-06 Score=80.11 Aligned_cols=160 Identities=8% Similarity=-0.033 Sum_probs=96.7
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
+.+||+.+++.... + ......+..+.|+|||+.++...... .|...|+.+++.......... +.
T Consensus 165 v~~~d~~~~~~~~~-~-------~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~~~d~~~~~~~~~~~~~~~--v~-- 228 (337)
T 1gxr_A 165 IAVWDLHNQTLVRQ-F-------QGHTDGASCIDISNDGTKLWTGGLDN----TVRSWDLREGRQLQQHDFTSQ--IF-- 228 (337)
T ss_dssp EEEEETTTTEEEEE-E-------CCCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTTEEEEEEECSSC--EE--
T ss_pred EEEEeCCCCceeee-e-------ecccCceEEEEECCCCCEEEEEecCC----cEEEEECCCCceEeeecCCCc--eE--
Confidence 68899998765433 2 12455678899999999877665333 489999999876544332211 10
Q ss_pred CCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEE
Q 008274 162 DCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCA 240 (571)
Q Consensus 162 ~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 240 (571)
. ..+++++ +++....+| .|++++..+++...+......+..+. |+++++.|+..+. ++ .+..+
T Consensus 229 ----~----~~~s~~~~~l~~~~~~~--~i~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~-dg----~i~~~ 292 (337)
T 1gxr_A 229 ----S----LGYCPTGEWLAVGMESS--NVEVLHVNKPDKYQLHLHESCVLSLK-FAYCGKWFVSTGK-DN----LLNAW 292 (337)
T ss_dssp ----E----EEECTTSSEEEEEETTS--CEEEEETTSSCEEEECCCSSCEEEEE-ECTTSSEEEEEET-TS----EEEEE
T ss_pred ----E----EEECCCCCEEEEEcCCC--cEEEEECCCCCeEEEcCCccceeEEE-ECCCCCEEEEecC-CC----cEEEE
Confidence 0 0234444 555555444 47777877776666655554566664 9999998766554 33 34444
Q ss_pred EeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEe
Q 008274 241 KLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFH 278 (571)
Q Consensus 241 ~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~ 278 (571)
++. .+. .............+.++|++++++...
T Consensus 293 ~~~-~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 293 RTP-YGA----SIFQSKESSSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp ETT-TCC----EEEEEECSSCEEEEEECTTSCEEEEEE
T ss_pred ECC-CCe----EEEEecCCCcEEEEEECCCCCEEEEec
Confidence 552 221 222333344456678999998776544
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.64 E-value=3.6e-06 Score=81.70 Aligned_cols=161 Identities=11% Similarity=0.152 Sum_probs=91.9
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.+||+++++.... + ......+..+.|+|||+.++...... .|.+.|+.+++.......... .+
T Consensus 145 ~v~i~~~~~~~~~~~-~-------~~~~~~v~~~~~spdg~~lasg~~dg----~i~iwd~~~~~~~~~~~~h~~-~v-- 209 (321)
T 3ow8_A 145 KVNIFGVESGKKEYS-L-------DTRGKFILSIAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAM-PI-- 209 (321)
T ss_dssp EEEEEETTTCSEEEE-E-------ECSSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTTEEEEEECCCSS-CC--
T ss_pred cEEEEEcCCCceeEE-e-------cCCCceEEEEEECCCCCEEEEEcCCC----eEEEEECCCCcEEEEEcccCC-ce--
Confidence 468889988765432 2 12345678899999999887765443 388889999875433221111 00
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.. ..+++++ +++....+|. |.++++..++. ..+......+..+ .|+|+++.|+..+. ++. ..+|
T Consensus 210 ----~~----l~~spd~~~l~s~s~dg~--i~iwd~~~~~~~~~~~~h~~~v~~~-~~sp~~~~l~s~s~-D~~--v~iw 275 (321)
T 3ow8_A 210 ----RS----LTFSPDSQLLVTASDDGY--IKIYDVQHANLAGTLSGHASWVLNV-AFCPDDTHFVSSSS-DKS--VKVW 275 (321)
T ss_dssp ----CE----EEECTTSCEEEEECTTSC--EEEEETTTCCEEEEECCCSSCEEEE-EECTTSSEEEEEET-TSC--EEEE
T ss_pred ----eE----EEEcCCCCEEEEEcCCCe--EEEEECCCcceeEEEcCCCCceEEE-EECCCCCEEEEEeC-CCc--EEEE
Confidence 00 1344554 6665555554 55666655443 3444444345555 49999997766554 332 4444
Q ss_pred EEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEE
Q 008274 239 CAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDF 277 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~ 277 (571)
++. .+. ....+.. ......+.++++|+.++-.
T Consensus 276 --d~~-~~~----~~~~~~~h~~~v~~v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 276 --DVG-TRT----CVHTFFDHQDQVWGVKYNGNGSKIVSV 308 (321)
T ss_dssp --ETT-TTE----EEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred --eCC-CCE----EEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence 451 121 2223332 2345567899999877543
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=98.64 E-value=5.6e-08 Score=80.70 Aligned_cols=96 Identities=16% Similarity=-0.023 Sum_probs=61.1
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.+|.++...... +.|.||++| +.. ..|.. . |+ .+|.|+++|+||+|.+.....
T Consensus 9 ~~g~~~~~~~~g---------~~~~vv~~H-~~~-----~~~~~----~---l~-~~~~v~~~d~~G~G~s~~~~~---- 61 (131)
T 2dst_A 9 LYGLNLVFDRVG---------KGPPVLLVA-EEA-----SRWPE----A---LP-EGYAFYLLDLPGYGRTEGPRM---- 61 (131)
T ss_dssp ETTEEEEEEEEC---------CSSEEEEES-SSG-----GGCCS----C---CC-TTSEEEEECCTTSTTCCCCCC----
T ss_pred ECCEEEEEEEcC---------CCCeEEEEc-CCH-----HHHHH----H---Hh-CCcEEEEECCCCCCCCCCCCC----
Confidence 367666554332 136788899 211 22322 1 44 459999999999987643211
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCe
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDV 457 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~ 457 (571)
. .++..+.+..+.+.- +.+++.++|||+||.+++.++.++|.+
T Consensus 62 ----~--~~~~~~~~~~~~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~l 104 (131)
T 2dst_A 62 ----A--PEELAHFVAGFAVMM--NLGAPWVLLRGLGLALGPHLEALGLRA 104 (131)
T ss_dssp ----C--HHHHHHHHHHHHHHT--TCCSCEEEECGGGGGGHHHHHHTTCCE
T ss_pred ----C--HHHHHHHHHHHHHHc--CCCccEEEEEChHHHHHHHHHhcCCcE
Confidence 0 344444444444332 446899999999999999999998863
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.62 E-value=4.1e-06 Score=82.35 Aligned_cols=174 Identities=10% Similarity=0.044 Sum_probs=95.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEec-cCccEEEEEEECCCCceE-EEEEeecCC--
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNR-SQTKLKVLKFDIKTGQRK-VILVEELDS-- 156 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r-~~~~~~i~~~d~~~g~~~-~l~~~~~~~-- 156 (571)
.|.+||+.+++....-. ....+..+.|+|||+.++..... ......|.++|+.++... .+.......
T Consensus 97 ~i~iwd~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWK---------SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp EEEEEETTTCCEEEEEE---------CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred eEEEEECCCCcEEEEee---------cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence 47889999887654421 34567789999999977776544 112234666666654321 111111000
Q ss_pred eeeccC---CcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCC-c-eeeceeecCeEEEEEEEEeecCcEEEEEEcCC
Q 008274 157 WVNLHD---CFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDING-T-CLGPITEGDWMVEQIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 157 w~~~~~---~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~-~-~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~ 230 (571)
-..... .... ..+++++ +++....+| .|+++++.. . ....+......+..+. |+|+++.|+..+..
T Consensus 168 ~~~~~~~~~~~~~----~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~d- 239 (369)
T 3zwl_B 168 KIITHEGLDAATV----AGWSTKGKYIIAGHKDG--KISKYDVSNNYEYVDSIDLHEKSISDMQ-FSPDLTYFITSSRD- 239 (369)
T ss_dssp EEECCTTCCCEEE----EEECGGGCEEEEEETTS--EEEEEETTTTTEEEEEEECCSSCEEEEE-ECTTSSEEEEEETT-
T ss_pred eccCCcCccceeE----EEEcCCCCEEEEEcCCC--EEEEEECCCCcEeEEEEecCCCceeEEE-ECCCCCEEEEecCC-
Confidence 000000 0000 1234444 555555555 577777765 3 3344444444556554 99999988766542
Q ss_pred CCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeC
Q 008274 231 GPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDS 280 (571)
Q Consensus 231 ~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~ 280 (571)
+ .+..+++. .+. ....+..........++|++++++.....
T Consensus 240 ~----~i~v~d~~-~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 240 T----NSFLVDVS-TLQ----VLKKYETDCPLNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp S----EEEEEETT-TCC----EEEEEECSSCEEEEEECSSSSEEEEEECC
T ss_pred c----eEEEEECC-CCc----eeeeecCCCCceeEEecCCCceEEEeecC
Confidence 2 45556662 222 33344444455667999999988776544
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.61 E-value=2.2e-05 Score=76.31 Aligned_cols=189 Identities=12% Similarity=0.102 Sum_probs=106.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeec-CCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEEL-DSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~-~~w~~ 159 (571)
.|+++|.++++.+.+... .......+.|+|||++++...........|+++|.++++.+.+..... .....
T Consensus 67 ~i~~~d~~~~~~~~~~~~--------~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 138 (333)
T 2dg1_A 67 NIFKINPETKEIKRPFVS--------HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCID 138 (333)
T ss_dssp EEEEECTTTCCEEEEEEC--------SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEE
T ss_pred EEEEEeCCCCcEEEEeeC--------CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCccc
Confidence 578899998887765321 234567789999998655543321112369999999998764432111 11110
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEec----CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCce
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEK----TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLE 234 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~----~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 234 (571)
. ...++++ +++.+.. .+...||+++.++++.+.++.+......+ .|++||+.||+.....
T Consensus 139 ------~----i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i-~~~~dg~~l~v~~~~~---- 203 (333)
T 2dg1_A 139 ------D----MVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGI-ALSTDEKVLWVTETTA---- 203 (333)
T ss_dssp ------E----EEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEE-EECTTSSEEEEEEGGG----
T ss_pred ------c----eEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccce-EECCCCCEEEEEeCCC----
Confidence 0 1234555 4443322 12467999998877766665432123344 4899999999886543
Q ss_pred eEEEEEEeCCCCCCCCCCCeE--------ecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 235 SHLYCAKLYPDWNHTLEAPVK--------LTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 235 ~~l~~~~l~~~g~~~~~~~~~--------lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
..|+++++..++. .... +..........++++|+.++.... ...|++++. +++.++.+
T Consensus 204 ~~i~~~d~~~~g~----~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~----~~~v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 204 NRLHRIALEDDGV----TIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG----QGRVLVFNK-RGYPIGQI 269 (333)
T ss_dssp TEEEEEEECTTSS----SEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET----TTEEEEECT-TSCEEEEE
T ss_pred CeEEEEEecCCCc----CcccccceEEEecCCCCCCCceEECCCCCEEEEEcC----CCEEEEECC-CCCEEEEE
Confidence 3577777732222 1111 111112344578888875443322 136788776 45544433
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.5e-05 Score=77.40 Aligned_cols=198 Identities=14% Similarity=0.012 Sum_probs=114.8
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
..++.|+||++.+.|+.... ..|+++|.++++.+.+..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~-----------------------------------~~i~~~d~~~~~~~~~~~------- 88 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILE-----------------------------------RELHELHLASGRKTVHAL------- 88 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGG-----------------------------------TEEEEEETTTTEEEEEEC-------
T ss_pred CcCCeEeCCCCEEEEEECCC-----------------------------------CEEEEEECCCCcEEEEEC-------
Confidence 46899999999887753221 157889999887765533
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC---CeeeccCCcccCCCCCccCCCe-EEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD---SWVNLHDCFTPLDKGVTKYSGG-FIW 180 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~---~w~~~~~~~~~~~~~~~~~~d~-~~~ 180 (571)
......+.|+|||++++.. .. .|+++|.++|+.+.+...... ...+. ..+++++ +++
T Consensus 89 ---~~~v~~i~~~~dg~l~v~~--~~----gl~~~d~~~g~~~~~~~~~~~~~~~~~~~----------i~~d~~G~l~v 149 (326)
T 2ghs_A 89 ---PFMGSALAKISDSKQLIAS--DD----GLFLRDTATGVLTLHAELESDLPGNRSND----------GRMHPSGALWI 149 (326)
T ss_dssp ---SSCEEEEEEEETTEEEEEE--TT----EEEEEETTTCCEEEEECSSTTCTTEEEEE----------EEECTTSCEEE
T ss_pred ---CCcceEEEEeCCCeEEEEE--CC----CEEEEECCCCcEEEEeeCCCCCCCCCCCC----------EEECCCCCEEE
Confidence 2356778999999866653 21 399999999998766432111 01110 0234555 554
Q ss_pred EEecC----CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeC-CCC-CCCCCCCe
Q 008274 181 ASEKT----GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLY-PDW-NHTLEAPV 254 (571)
Q Consensus 181 ~s~~~----g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~-~~g-~~~~~~~~ 254 (571)
.+... +...||+++ + ++.+.+..+......+ .|++||+.||+..... ..|+++++. .+| . ....+
T Consensus 150 ~~~~~~~~~~~~~l~~~~-~-g~~~~~~~~~~~~~~i-~~s~dg~~lyv~~~~~----~~I~~~d~~~~~Gl~--~~~~~ 220 (326)
T 2ghs_A 150 GTMGRKAETGAGSIYHVA-K-GKVTKLFADISIPNSI-CFSPDGTTGYFVDTKV----NRLMRVPLDARTGLP--TGKAE 220 (326)
T ss_dssp EEEETTCCTTCEEEEEEE-T-TEEEEEEEEESSEEEE-EECTTSCEEEEEETTT----CEEEEEEBCTTTCCB--SSCCE
T ss_pred EeCCCcCCCCceEEEEEe-C-CcEEEeeCCCcccCCe-EEcCCCCEEEEEECCC----CEEEEEEcccccCCc--ccCce
Confidence 43221 346899998 4 5555554321112334 4999999999986543 467888873 122 1 11112
Q ss_pred Ee---cCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 255 KL---TNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 255 ~l---t~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
.+ ....+ .....++++|+..+..... ..|++++. +++.
T Consensus 221 ~~~~~~~~~~~p~gi~~d~~G~lwva~~~~----~~v~~~d~-~g~~ 262 (326)
T 2ghs_A 221 VFIDSTGIKGGMDGSVCDAEGHIWNARWGE----GAVDRYDT-DGNH 262 (326)
T ss_dssp EEEECTTSSSEEEEEEECTTSCEEEEEETT----TEEEEECT-TCCE
T ss_pred EEEECCCCCCCCCeeEECCCCCEEEEEeCC----CEEEEECC-CCCE
Confidence 22 11112 2345778888654433211 36777765 4543
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=98.58 E-value=3e-05 Score=75.30 Aligned_cols=205 Identities=11% Similarity=0.058 Sum_probs=107.0
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECC--CCceEEEeccCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA--GGPVSWMDLQCGG 101 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~--~~~~~~~~~~~~~ 101 (571)
....+.|||||++|++...++ . .+.+|+++ +++.+.+...
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~-~----------------------------------~v~~~~~~~~~~~~~~~~~~--- 80 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPE-F----------------------------------RVLAYRIAPDDGALTFAAES--- 80 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTT-T----------------------------------EEEEEEECTTTCCEEEEEEE---
T ss_pred CCceEEECCCCCEEEEeecCC-C----------------------------------eEEEEEecCCCCceeecccc---
Confidence 456799999999987754321 1 35666665 6765544221
Q ss_pred CCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEE
Q 008274 102 TDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIW 180 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~ 180 (571)
........++|+|||+.+++....+ + .|.++|+..|....+....... .. .....+++++ .++
T Consensus 81 ----~~~~~~~~~~~s~dg~~l~~~~~~~-~--~i~~~d~~~~~~~~~~~~~~~~-----~~----~~~~~~s~dg~~l~ 144 (343)
T 1ri6_A 81 ----ALPGSLTHISTDHQGQFVFVGSYNA-G--NVSVTRLEDGLPVGVVDVVEGL-----DG----CHSANISPDNRTLW 144 (343)
T ss_dssp ----ECSSCCSEEEECTTSSEEEEEETTT-T--EEEEEEEETTEEEEEEEEECCC-----TT----BCCCEECTTSSEEE
T ss_pred ----ccCCCCcEEEEcCCCCEEEEEecCC-C--eEEEEECCCCccccccccccCC-----CC----ceEEEECCCCCEEE
Confidence 1122456689999999776665433 2 3555566444433222211110 00 0111345655 555
Q ss_pred EEe-cCCccEEEEEeCCC-ceeece-----ee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCC
Q 008274 181 ASE-KTGFRHLYLHDING-TCLGPI-----TE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEA 252 (571)
Q Consensus 181 ~s~-~~g~~~l~~~~~~~-~~~~~l-----T~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~ 252 (571)
++. .++ .|+++++.+ ++...+ .. .......+ .|+|+|++||+.....+ .+..+++..... ....
T Consensus 145 ~~~~~~~--~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pdg~~l~~~~~~~~----~i~~~~~~~~~g-~~~~ 216 (343)
T 1ri6_A 145 VPALKQD--RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM-VFHPNEQYAYCVNELNS----SVDVWELKDPHG-NIEC 216 (343)
T ss_dssp EEEGGGT--EEEEEEECTTSCEEEEEEEEEECSTTCCEEEE-EECTTSSEEEEEETTTT----EEEEEESSCTTS-CCEE
T ss_pred EecCCCC--EEEEEEecCCCceeeecccccccCCCCCcceE-EECCCCCEEEEEeCCCC----EEEEEEecCCCC-cEEE
Confidence 554 344 577777655 444322 21 11123344 49999999998875544 344444421111 1000
Q ss_pred CeEec---CC----CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 253 PVKLT---NG----KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 253 ~~~lt---~~----~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
...+. .. .....+.++|+|+++++.... -..+.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~---~~~i~v~d~~ 261 (343)
T 1ri6_A 217 VQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT---ASLITVFSVS 261 (343)
T ss_dssp EEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT---TTEEEEEEEC
T ss_pred EeeccccCccccccCCccceEECCCCCEEEEEecC---CCEEEEEEEc
Confidence 11111 11 122356899999988665432 2478888875
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=98.57 E-value=5.7e-06 Score=80.54 Aligned_cols=166 Identities=7% Similarity=-0.003 Sum_probs=81.2
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCC-CceEEEE--Eeec-CCeeeccCCcccCCCCCccCCCe-EEEEEe-
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT-GQRKVIL--VEEL-DSWVNLHDCFTPLDKGVTKYSGG-FIWASE- 183 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~-g~~~~l~--~~~~-~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~- 183 (571)
....+.|+|||+.++.....+. .|+++|+.+ |+...+. .... .+-.. . ...+++++ +++.+.
T Consensus 130 ~~~~~~~s~dg~~l~~~~~~~~---~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 130 GCHSANISPDNRTLWVPALKQD---RICLFTVSDDGHLVAQDPAEVTTVEGAGP-----R----HMVFHPNEQYAYCVNE 197 (343)
T ss_dssp TBCCCEECTTSSEEEEEEGGGT---EEEEEEECTTSCEEEEEEEEEECSTTCCE-----E----EEEECTTSSEEEEEET
T ss_pred CceEEEECCCCCEEEEecCCCC---EEEEEEecCCCceeeecccccccCCCCCc-----c----eEEECCCCCEEEEEeC
Confidence 3555789999997766542332 488888887 7665443 2111 10000 0 01244554 444443
Q ss_pred cCCccEEEEEeCC--Cceeece---e---ec---CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCC
Q 008274 184 KTGFRHLYLHDIN--GTCLGPI---T---EG---DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEA 252 (571)
Q Consensus 184 ~~g~~~l~~~~~~--~~~~~~l---T---~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~ 252 (571)
.++ .|.+++.+ +++.+.+ . .+ ......+ .|+|||++||++...++ .++.+++...+. ....
T Consensus 198 ~~~--~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i-~~s~dg~~l~v~~~~~~----~i~v~d~~~~~~-~~~~ 269 (343)
T 1ri6_A 198 LNS--SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI-HITPDGRHLYACDRTAS----LITVFSVSEDGS-VLSK 269 (343)
T ss_dssp TTT--EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE-EECTTSSEEEEEETTTT----EEEEEEECTTSC-CEEE
T ss_pred CCC--EEEEEEecCCCCcEEEEeeccccCccccccCCccce-EECCCCCEEEEEecCCC----EEEEEEEcCCCC-ceEE
Confidence 344 46666653 3432211 1 11 1122234 59999999988765443 344444421121 0001
Q ss_pred CeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 253 PVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 253 ~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
...+........+.++|+|++++...... ..-.+|.++..+++
T Consensus 270 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 270 EGFQPTETQPRGFNVDHSGKYLIAAGQKS-HHISVYEIVGEQGL 312 (343)
T ss_dssp EEEEECSSSCCCEEECTTSSEEEEECTTT-CEEEEEEEETTTTE
T ss_pred eeeecCCCccceEEECCCCCEEEEecCCC-CeEEEEEEcCCCce
Confidence 22233222334568999999876654332 22234444554443
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.57 E-value=1.9e-05 Score=75.48 Aligned_cols=208 Identities=10% Similarity=0.041 Sum_probs=117.6
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
...+++.|+|+++.|.|+-.. . ..|+.+|.++++.+.+..
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~--~---------------------------------~~i~~~d~~~~~~~~~~~----- 52 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIP--A---------------------------------KKVCRWDSFTKQVQRVTM----- 52 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETT--T---------------------------------TEEEEEETTTCCEEEEEC-----
T ss_pred ccccCCeEECCCCEEEEEECC--C---------------------------------CEEEEEECCCCcEEEEeC-----
Confidence 345699999999998774321 1 157889999887765533
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWA 181 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~ 181 (571)
......+.++|||++++. . .. .|+++|.++|+.+.+....... +.-++.. ...++++ +++.
T Consensus 53 -----~~~~~~i~~~~dG~l~v~-~-~~----~l~~~d~~~g~~~~~~~~~~~~-----~~~~~~d--i~~d~dG~l~~~ 114 (297)
T 3g4e_A 53 -----DAPVSSVALRQSGGYVAT-I-GT----KFCALNWKEQSAVVLATVDNDK-----KNNRFND--GKVDPAGRYFAG 114 (297)
T ss_dssp -----SSCEEEEEEBTTSSEEEE-E-TT----EEEEEETTTTEEEEEEECCTTC-----SSEEEEE--EEECTTSCEEEE
T ss_pred -----CCceEEEEECCCCCEEEE-E-CC----eEEEEECCCCcEEEEEecCCCC-----CCCCCCC--EEECCCCCEEEe
Confidence 235667899999994433 2 21 4999999999887776532110 0000000 0234555 5554
Q ss_pred EecC---------CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeC-CCCCCCCC
Q 008274 182 SEKT---------GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLY-PDWNHTLE 251 (571)
Q Consensus 182 s~~~---------g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~-~~g~~~~~ 251 (571)
+... ....||+++.++. ...+..+......+ .|++||+.||++.... ..|++++++ .+|. ..
T Consensus 115 ~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi-~~spdg~~lyv~~~~~----~~i~~~~~d~~~G~--~~ 186 (297)
T 3g4e_A 115 TMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGL-DWSLDHKIFYYIDSLS----YSVDAFDYDLQTGQ--IS 186 (297)
T ss_dssp EEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEE-EECTTSCEEEEEEGGG----TEEEEEEECTTTCC--EE
T ss_pred cCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccce-EEcCCCCEEEEecCCC----CcEEEEeccCCCCc--cc
Confidence 3221 2357999998654 33333221122344 4999999999987654 356666652 1232 00
Q ss_pred CCeEec---CC-CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 252 APVKLT---NG-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 252 ~~~~lt---~~-~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
..+.+. .. ..-....++++|+..+..... ..+++++..+++.+..
T Consensus 187 ~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~----~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 187 NRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG----GRVIRLDPVTGKRLQT 235 (297)
T ss_dssp EEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT----TEEEEECTTTCCEEEE
T ss_pred CcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC----CEEEEEcCCCceEEEE
Confidence 111221 11 122445788888644433322 3688887755665443
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=98.52 E-value=8.7e-06 Score=89.72 Aligned_cols=204 Identities=14% Similarity=0.119 Sum_probs=118.7
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|||||++||....+ ..|.+||+.+++.... +
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~------------------------------------g~v~iwd~~~~~~~~~-~----- 51 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYS------------------------------------GRVEIWNYETQVEVRS-I----- 51 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETT------------------------------------SEEEEEETTTTEEEEE-E-----
T ss_pred CceEEEEECCCCCEEEEEeCC------------------------------------CEEEEEECCCCceEEE-E-----
Confidence 445789999999999886421 1468899988765432 1
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWA 181 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~ 181 (571)
......+..+.|+|||+.++...... .|.+.|+.+|+.......... .+. .+ .|++++ +++.
T Consensus 52 --~~~~~~v~~~~~s~~~~~l~~~~~dg----~i~vw~~~~~~~~~~~~~~~~-~v~------~~----~~s~~~~~l~~ 114 (814)
T 3mkq_A 52 --QVTETPVRAGKFIARKNWIIVGSDDF----RIRVFNYNTGEKVVDFEAHPD-YIR------SI----AVHPTKPYVLS 114 (814)
T ss_dssp --ECCSSCEEEEEEEGGGTEEEEEETTS----EEEEEETTTCCEEEEEECCSS-CEE------EE----EECSSSSEEEE
T ss_pred --ecCCCcEEEEEEeCCCCEEEEEeCCC----eEEEEECCCCcEEEEEecCCC-CEE------EE----EEeCCCCEEEE
Confidence 22456788899999999888775533 488899999876543332111 110 01 244554 5555
Q ss_pred EecCCccEEEEEeCCCc--eeeceeecCeEEEEEEEEee-cCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC
Q 008274 182 SEKTGFRHLYLHDINGT--CLGPITEGDWMVEQIVGVNE-ASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258 (571)
Q Consensus 182 s~~~g~~~l~~~~~~~~--~~~~lT~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~ 258 (571)
+..+|. |.+++..++ ....++.....+... .|+| +++.|+. +..++ .|..+++. .+. ....+..
T Consensus 115 ~~~dg~--i~vw~~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~~l~~-~~~dg----~v~vwd~~-~~~----~~~~~~~ 181 (814)
T 3mkq_A 115 GSDDLT--VKLWNWENNWALEQTFEGHEHFVMCV-AFNPKDPSTFAS-GCLDR----TVKVWSLG-QST----PNFTLTT 181 (814)
T ss_dssp EETTSE--EEEEEGGGTSEEEEEEECCSSCEEEE-EEETTEEEEEEE-EETTS----EEEEEETT-CSS----CSEEEEC
T ss_pred EcCCCE--EEEEECCCCceEEEEEcCCCCcEEEE-EEEcCCCCEEEE-EeCCC----eEEEEECC-CCc----ceeEEec
Confidence 556664 444454443 334444444445555 4999 5655554 44443 34445552 121 2333332
Q ss_pred C--CceEEEEECC--CCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 259 G--KGKHVAVLDH--NMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 259 ~--~g~~~~~~s~--~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
. .....+.++| ++++++..... ..+.+.++.+++.+..+.
T Consensus 182 ~~~~~v~~~~~~~~~~~~~l~~~~~d----g~i~~~d~~~~~~~~~~~ 225 (814)
T 3mkq_A 182 GQERGVNYVDYYPLPDKPYMITASDD----LTIKIWDYQTKSCVATLE 225 (814)
T ss_dssp CCTTCCCEEEECCSTTCCEEEEECTT----SEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEEEECCCCCEEEEEeCC----CEEEEEECCCCcEEEEEc
Confidence 2 3344567887 88876654332 378888877766555543
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=98.51 E-value=1.8e-05 Score=78.55 Aligned_cols=188 Identities=11% Similarity=0.016 Sum_probs=108.1
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEcc-CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeec-CCeee
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEEL-DSWVN 159 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~-~~w~~ 159 (571)
|.+||+.+++....... ......+..+.|+| |++.++...... .|.+.|+.++..+.+..... ..++.
T Consensus 98 i~iwd~~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~~l~s~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~v~ 167 (383)
T 3ei3_B 98 IILWDYDVQNKTSFIQG------MGPGDAITGMKFNQFNTNQLFVSSIRG----ATTLRDFSGSVIQVFAKTDSWDYWYC 167 (383)
T ss_dssp EEEEETTSTTCEEEECC------CSTTCBEEEEEEETTEEEEEEEEETTT----EEEEEETTSCEEEEEECCCCSSCCEE
T ss_pred EEEEeCCCcccceeeec------CCcCCceeEEEeCCCCCCEEEEEeCCC----EEEEEECCCCceEEEeccCCCCCCeE
Confidence 68889998766544221 13456788899999 556666554332 48888998765554433221 11111
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
. + .+++++ +++....+| .|+++++.+.....+......+..+. |+|+++.+++++..++ .+.
T Consensus 168 ~------~----~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~h~~~v~~~~-~~~~~~~~l~s~~~d~----~i~ 230 (383)
T 3ei3_B 168 C------V----DVSVSRQMLATGDSTG--RLLLLGLDGHEIFKEKLHKAKVTHAE-FNPRCDWLMATSSVDA----TVK 230 (383)
T ss_dssp E------E----EEETTTTEEEEEETTS--EEEEEETTSCEEEEEECSSSCEEEEE-ECSSCTTEEEEEETTS----EEE
T ss_pred E------E----EECCCCCEEEEECCCC--CEEEEECCCCEEEEeccCCCcEEEEE-ECCCCCCEEEEEeCCC----EEE
Confidence 0 0 233443 555555555 57777777766666665554566664 9999985666665554 344
Q ss_pred EEEeCCCCCCCCCCCeEecCCCceEEEEECC-CCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 239 CAKLYPDWNHTLEAPVKLTNGKGKHVAVLDH-NMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~-~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
..++....... .....+........+.++| ++++++..... ..+.++++.+++....+
T Consensus 231 iwd~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 231 LWDLRNIKDKN-SYIAEMPHEKPVNAAYFNPTDSTKLLTTDQR----NEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EEEGGGCCSTT-CEEEEEECSSCEEEEEECTTTSCEEEEEESS----SEEEEEETTBTTSCSEE
T ss_pred EEeCCCCCccc-ceEEEecCCCceEEEEEcCCCCCEEEEEcCC----CcEEEEECCCCcccccc
Confidence 44552111100 0122233334456679999 99887655432 37888898776654443
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.50 E-value=4e-05 Score=76.73 Aligned_cols=185 Identities=11% Similarity=0.019 Sum_probs=101.9
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.+||+..+......+ ......+..+.|+|||+.++...... .|.+.|+.+++.......... .+.
T Consensus 197 ~i~i~d~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~s~~~d~----~v~iwd~~~~~~~~~~~~~~~-~v~- 263 (401)
T 4aez_A 197 AIHHHDVRIANHQIGTL-------QGHSSEVCGLAWRSDGLQLASGGNDN----VVQIWDARSSIPKFTKTNHNA-AVK- 263 (401)
T ss_dssp EEEEEETTSSSCEEEEE-------ECCSSCEEEEEECTTSSEEEEEETTS----CEEEEETTCSSEEEEECCCSS-CCC-
T ss_pred CEEEEecccCcceeeEE-------cCCCCCeeEEEEcCCCCEEEEEeCCC----eEEEccCCCCCccEEecCCcc-eEE-
Confidence 57788888433322222 23456788899999999877765443 388899998876543321111 110
Q ss_pred cCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEc-CCCCceeEE
Q 008274 161 HDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGT-LDGPLESHL 237 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~-~~~~~~~~l 237 (571)
. ..+++++ ++.......-..|++++..+++..........+..+ .|+++++.|+..+. .++ ...+
T Consensus 264 -----~----~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~~~~g~~dg--~i~v 331 (401)
T 4aez_A 264 -----A----VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSL-IWSPHSKEIMSTHGFPDN--NLSI 331 (401)
T ss_dssp -----E----EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEE-EECSSSSEEEEEECTTTC--EEEE
T ss_pred -----E----EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEE-EECCCCCeEEEEeecCCC--cEEE
Confidence 0 0233432 554443212346788887666543333333345555 49999999888764 333 3556
Q ss_pred EEEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeE
Q 008274 238 YCAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVL 299 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~ 299 (571)
|.+.- ... .....+.. ......+.++|+|++++..... ..+.+.++.+++.++
T Consensus 332 ~~~~~--~~~---~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d----g~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 332 WSYSS--SGL---TKQVDIPAHDTRVLYSALSPDGRILSTAASD----ENLKFWRVYDGDHVK 385 (401)
T ss_dssp EEEET--TEE---EEEEEEECCSSCCCEEEECTTSSEEEEECTT----SEEEEEECCC-----
T ss_pred EecCC--ccc---eeEEEecCCCCCEEEEEECCCCCEEEEEeCC----CcEEEEECCCCcccc
Confidence 55442 111 01112222 2234556899999977654322 378888887766543
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.3e-05 Score=77.80 Aligned_cols=181 Identities=12% Similarity=0.104 Sum_probs=102.4
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|.+||+.+++.... +. .....+..+.|+|||+.++...... .|.+.|+++++.......... .+.
T Consensus 103 ~i~lWd~~~~~~~~~-~~-------~~~~~~~~~~~spdg~~l~~g~~dg----~v~i~~~~~~~~~~~~~~~~~-~v~- 168 (321)
T 3ow8_A 103 HIRLWDLENGKQIKS-ID-------AGPVDAWTLAFSPDSQYLATGTHVG----KVNIFGVESGKKEYSLDTRGK-FIL- 168 (321)
T ss_dssp EEEEEETTTTEEEEE-EE-------CCTTCCCCEEECTTSSEEEEECTTS----EEEEEETTTCSEEEEEECSSS-CEE-
T ss_pred cEEEEECCCCCEEEE-Ee-------CCCccEEEEEECCCCCEEEEEcCCC----cEEEEEcCCCceeEEecCCCc-eEE-
Confidence 578899998865432 11 1233445689999999877654333 488889998876543322111 111
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
. ..+++++ +++....+| .|.++++.+++. ..+......+..+ .|+|+++.|+.. ..++. ..+|
T Consensus 169 -----~----~~~spdg~~lasg~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l-~~spd~~~l~s~-s~dg~--i~iw 233 (321)
T 3ow8_A 169 -----S----IAYSPDGKYLASGAIDG--IINIFDIATGKLLHTLEGHAMPIRSL-TFSPDSQLLVTA-SDDGY--IKIY 233 (321)
T ss_dssp -----E----EEECTTSSEEEEEETTS--CEEEEETTTTEEEEEECCCSSCCCEE-EECTTSCEEEEE-CTTSC--EEEE
T ss_pred -----E----EEECCCCCEEEEEcCCC--eEEEEECCCCcEEEEEcccCCceeEE-EEcCCCCEEEEE-cCCCe--EEEE
Confidence 0 0234554 555555555 466777766654 3344334345555 499999866554 44432 4444
Q ss_pred EEEeCCCCCCCCCCCeEecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 239 CAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
++. .+. ....+.... ....+.|+|++++++... .. ..+.+.++.+++.+..+
T Consensus 234 --d~~-~~~----~~~~~~~h~~~v~~~~~sp~~~~l~s~s-~D---~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 234 --DVQ-HAN----LAGTLSGHASWVLNVAFCPDDTHFVSSS-SD---KSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp --ETT-TCC----EEEEECCCSSCEEEEEECTTSSEEEEEE-TT---SCEEEEETTTTEEEEEE
T ss_pred --ECC-Ccc----eeEEEcCCCCceEEEEECCCCCEEEEEe-CC---CcEEEEeCCCCEEEEEE
Confidence 552 121 233344322 345668999999765533 32 25777888766655444
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.3e-05 Score=75.75 Aligned_cols=206 Identities=10% Similarity=0.034 Sum_probs=117.4
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|||||++|+....+ + .|.+||+.+++.... +
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~d-g-----------------------------------~i~vwd~~~~~~~~~-~----- 70 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKD-S-----------------------------------SASVWYSLNGERLGT-L----- 70 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESS-S-----------------------------------CEEEEETTTCCEEEE-E-----
T ss_pred ceEEEEEEcCCCCEEEEEeCC-C-----------------------------------EEEEEeCCCchhhhh-h-----
Confidence 345678899999988775322 1 368899988776543 2
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWA 181 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~ 181 (571)
......+..+.|+|||+.++...... .|.+.|+.+++.......... +.. . .+++++ +++.
T Consensus 71 --~~h~~~v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~--v~~---~-------~~~~~~~~l~~ 132 (369)
T 3zwl_B 71 --DGHTGTIWSIDVDCFTKYCVTGSADY----SIKLWDVSNGQCVATWKSPVP--VKR---V-------EFSPCGNYFLA 132 (369)
T ss_dssp --CCCSSCEEEEEECTTSSEEEEEETTT----EEEEEETTTCCEEEEEECSSC--EEE---E-------EECTTSSEEEE
T ss_pred --hhcCCcEEEEEEcCCCCEEEEEeCCC----eEEEEECCCCcEEEEeecCCC--eEE---E-------EEccCCCEEEE
Confidence 23456788899999999887765433 488899999987655442221 100 0 233443 4444
Q ss_pred EecC---CccEEEEEeCCCce------------eeceeecC--eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCC
Q 008274 182 SEKT---GFRHLYLHDINGTC------------LGPITEGD--WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYP 244 (571)
Q Consensus 182 s~~~---g~~~l~~~~~~~~~------------~~~lT~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~ 244 (571)
...+ ....|.++++..+. ...+.... ..+..+ .|+++++.|+..+. ++ .|+.+++..
T Consensus 133 ~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~-dg----~i~i~d~~~ 206 (369)
T 3zwl_B 133 ILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA-GWSTKGKYIIAGHK-DG----KISKYDVSN 206 (369)
T ss_dssp EECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE-EECGGGCEEEEEET-TS----EEEEEETTT
T ss_pred ecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE-EEcCCCCEEEEEcC-CC----EEEEEECCC
Confidence 4333 11234444432221 11111111 133444 49999997776543 32 455556621
Q ss_pred CCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 245 DWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 245 ~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.+. ....+.. ......+.++|++++++..... ..+.++++.+++....+.
T Consensus 207 ~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 207 NYE----YVDSIDLHEKSISDMQFSPDLTYFITSSRD----TNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp TTE----EEEEEECCSSCEEEEEECTTSSEEEEEETT----SEEEEEETTTCCEEEEEE
T ss_pred CcE----eEEEEecCCCceeEEEECCCCCEEEEecCC----ceEEEEECCCCceeeeec
Confidence 121 2333332 2345566999999988665433 378888987777655443
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.8e-05 Score=77.42 Aligned_cols=173 Identities=9% Similarity=-0.043 Sum_probs=97.0
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEEE-EeecCCeee
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVIL-VEELDSWVN 159 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~-~~~~~~w~~ 159 (571)
|.+||+.+++.... + ......+..+.|+||++ +++... .++ .|.+.|+.+++..... .........
T Consensus 151 i~iwd~~~~~~~~~-~-------~~h~~~V~~~~~~~~~~~~l~s~s-~D~---~v~iwd~~~~~~~~~~~~~~~~~~~~ 218 (344)
T 4gqb_B 151 IKVWDLAQQVVLSS-Y-------RAHAAQVTCVAASPHKDSVFLSCS-EDN---RILLWDTRCPKPASQIGCSAPGYLPT 218 (344)
T ss_dssp EEEEETTTTEEEEE-E-------CCCSSCEEEEEECSSCTTEEEEEE-TTS---CEEEEETTSSSCEEECC----CCCEE
T ss_pred EEEEECCCCcEEEE-E-------cCcCCceEEEEecCCCCCceeeec-ccc---ccccccccccceeeeeecceeeccce
Confidence 68899998876533 2 23456788899999997 444443 332 2788899988764332 111111111
Q ss_pred ccCCcccCCCCCccCC-C-eEEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 160 LHDCFTPLDKGVTKYS-G-GFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~-d-~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
. . .+.+ + .++.....+| .|.++|+.+++. ..+......+..+. |+|+|..+++++..++. ..
T Consensus 219 ~---~-------~~~p~~~~~l~sg~~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~-fsp~g~~~lasgs~D~~--i~ 283 (344)
T 4gqb_B 219 S---L-------AWHPQQSEVFVFGDENG--TVSLVDTKSTSCVLSSAVHSQCVTGLV-FSPHSVPFLASLSEDCS--LA 283 (344)
T ss_dssp E---E-------EECSSCTTEEEEEETTS--EEEEEESCC--CCEEEECCSSCEEEEE-ECSSSSCCEEEEETTSC--EE
T ss_pred e---e-------eecCCCCcceEEeccCC--cEEEEECCCCcEEEEEcCCCCCEEEEE-EccCCCeEEEEEeCCCe--EE
Confidence 0 0 1222 2 3555555555 466677766543 44444444556554 99999777777766653 44
Q ss_pred EEEEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
|| ++ ... +..++.. ......+.|||+++.++.+.+... .+.+.++
T Consensus 284 vw--d~--~~~----~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~---~v~~w~v 329 (344)
T 4gqb_B 284 VL--DS--SLS----ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDH---QVVHHVV 329 (344)
T ss_dssp EE--CT--TCC----EEEEECCCSSCEEEEEECSSSTTEEEEEETTS---CEEEEEC
T ss_pred EE--EC--CCC----cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCC---eEEEEEC
Confidence 44 55 222 2233322 233556789999988877776543 3555554
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.46 E-value=2e-05 Score=75.18 Aligned_cols=208 Identities=13% Similarity=0.002 Sum_probs=117.8
Q ss_pred cCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCC
Q 008274 22 MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGG 101 (571)
Q Consensus 22 ~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~ 101 (571)
.....++.|+|||+.|.++..... .|+++|.+++ .+.+..
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~-----------------------------------~i~~~~~~~~-~~~~~~---- 66 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQN-----------------------------------RTWAWSDDGQ-LSPEMH---- 66 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGT-----------------------------------EEEEEETTSC-EEEEES----
T ss_pred CccccCCeEeCCCCEEEEEeCCCC-----------------------------------EEEEEECCCC-eEEEEC----
Confidence 445678999999998877543211 4788999988 555533
Q ss_pred CCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEE
Q 008274 102 TDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWA 181 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~ 181 (571)
.......+.++|||++++.. ... ..|+++|.++|+.+.+.......-. -.+. ....++++-+++
T Consensus 67 -----~~~~~~~l~~~~dg~l~v~~-~~~---~~i~~~d~~~g~~~~~~~~~~~~~~-----~~~~--~i~~d~~G~l~v 130 (296)
T 3e5z_A 67 -----PSHHQNGHCLNKQGHLIACS-HGL---RRLERQREPGGEWESIADSFEGKKL-----NSPN--DVCLAPDGSLWF 130 (296)
T ss_dssp -----SCSSEEEEEECTTCCEEEEE-TTT---TEEEEECSTTCCEEEEECEETTEEC-----CCCC--CEEECTTSCEEE
T ss_pred -----CCCCcceeeECCCCcEEEEe-cCC---CeEEEEcCCCCcEEEEeeccCCCCC-----CCCC--CEEECCCCCEEE
Confidence 23456678999999855433 221 2499999999988766433211000 0010 112355663344
Q ss_pred Eec----------------CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCC
Q 008274 182 SEK----------------TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPD 245 (571)
Q Consensus 182 s~~----------------~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~ 245 (571)
++. .+...||+++.+ ++.+.+..+......+ .|++||+.| ++.... ..|+++++..+
T Consensus 131 td~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi-~~s~dg~~l-v~~~~~----~~i~~~~~~~~ 203 (296)
T 3e5z_A 131 SDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGL-AFLPSGNLL-VSDTGD----NATHRYCLNAR 203 (296)
T ss_dssp EECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEE-EECTTSCEE-EEETTT----TEEEEEEECSS
T ss_pred ECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccE-EECCCCCEE-EEeCCC----CeEEEEEECCC
Confidence 321 123489999987 5555554433233444 499999988 665543 35777777322
Q ss_pred CCCCC-CCCeEecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 246 WNHTL-EAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 246 g~~~~-~~~~~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
|. . ...+.+.... ......++++|+.++.. ...+++++. +++.+..+
T Consensus 204 g~--~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~------~~~v~~~~~-~g~~~~~~ 252 (296)
T 3e5z_A 204 GE--TEYQGVHFTVEPGKTDGLRVDAGGLIWASA------GDGVHVLTP-DGDELGRV 252 (296)
T ss_dssp SC--EEEEEEEECCSSSCCCSEEEBTTSCEEEEE------TTEEEEECT-TSCEEEEE
T ss_pred Cc--CcCCCeEeeCCCCCCCeEEECCCCCEEEEc------CCeEEEECC-CCCEEEEE
Confidence 32 1 0112221111 12345788999754433 247888886 46554444
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=9.7e-06 Score=84.69 Aligned_cols=198 Identities=11% Similarity=0.047 Sum_probs=110.7
Q ss_pred EEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|+++|+++++...+ .+. .......+.|+|||++++...+.++ .|.++|+++|+.......... +
T Consensus 303 ~i~vvd~~~~~~l~~~~i~--------~~~~~~~~~~spdg~~l~va~~~~~---~v~v~D~~tg~l~~~i~~g~~---p 368 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTSIG--------AAPFLHDGGWDSSHRYFMTAANNSN---KVAVIDSKDRRLSALVDVGKT---P 368 (543)
T ss_dssp EEEEEECTTSSSCEEEEEE--------CCSSCCCEEECTTSCEEEEEEGGGT---EEEEEETTTTEEEEEEECSSS---B
T ss_pred eEEEEEecCCCcceeEEec--------cCcCccCceECCCCCEEEEEecCCC---eEEEEECCCCeEEEeeccCCC---C
Confidence 578888877543221 111 1223445789999997665544332 488899999986554331100 0
Q ss_pred ccCCcccCCCCCccCCC-eEEEEEecCCccEEEEEeCCC-------c-eeeceeecCeEEEEEEEEeecCcEEEEEEcCC
Q 008274 160 LHDCFTPLDKGVTKYSG-GFIWASEKTGFRHLYLHDING-------T-CLGPITEGDWMVEQIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d-~~~~~s~~~g~~~l~~~~~~~-------~-~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~ 230 (571)
. +. +... -.+++ +.++.+...+-..|.+++.+. . ..+.|....-.. .++.++|||++||..+...
T Consensus 369 h-~g-~g~~---~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~-~~v~~~pdg~~l~v~~~~~ 442 (543)
T 1nir_A 369 H-PG-RGAN---FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGS-LFIKTHPKSSHLYVDTTFN 442 (543)
T ss_dssp C-CT-TCEE---EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCC-CCEECCTTCCEEEECCTTC
T ss_pred C-CC-CCcc---cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCc-eEEEcCCCCCcEEEecCCC
Confidence 0 00 0000 01233 555666554445677777655 2 233443221111 1235899999999876322
Q ss_pred C--CceeEEEEEEeCCCCCCCCCCC-eEe--------cC-CCceEEEEECCCCCEEEEEeeCC-CCCCEEEEEEcCCCce
Q 008274 231 G--PLESHLYCAKLYPDWNHTLEAP-VKL--------TN-GKGKHVAVLDHNMRNFVDFHDSL-DSPPRILLCSLQDGSL 297 (571)
Q Consensus 231 ~--~~~~~l~~~~l~~~g~~~~~~~-~~l--------t~-~~g~~~~~~s~~g~~~v~~~s~~-~~p~~l~~~~~~~~~~ 297 (571)
. .....|..+++. ++. .. +.| +. ......+.++++|+++.++.-+. .....|.++|..+++.
T Consensus 443 ~~~~~~~~v~v~d~~-~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~ 517 (543)
T 1nir_A 443 PDARISQSVAVFDLK-NLD----AKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKL 517 (543)
T ss_dssp SSHHHHTCEEEEETT-CTT----SCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred CCcccCceEEEEECC-CCC----CCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceE
Confidence 1 013567777773 222 22 343 22 22344568999999998876433 3467999999988887
Q ss_pred eEeccC
Q 008274 298 VLPLYE 303 (571)
Q Consensus 298 ~~~l~~ 303 (571)
.+++..
T Consensus 518 ~~~i~~ 523 (543)
T 1nir_A 518 KAVVKD 523 (543)
T ss_dssp EEEECC
T ss_pred EEeecC
Confidence 766654
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=98.44 E-value=5.2e-05 Score=74.61 Aligned_cols=211 Identities=10% Similarity=0.037 Sum_probs=117.9
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|||||+.|+....+ ..|.+||+++++...+..-
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d------------------------------------~~v~i~~~~~~~~~~~~~~---- 48 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNN------------------------------------HEVHIYEKSGNKWVQVHEL---- 48 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSS------------------------------------SEEEEEEEETTEEEEEEEE----
T ss_pred CCeEEEEECCCCCEEEEEeCC------------------------------------CEEEEEeCCCCcEEeeeee----
Confidence 346789999999998874321 1478889988852222110
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCeeeccCCcccCCCCCccCCCe-EEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVNLHDCFTPLDKGVTKYSGG-FIW 180 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~~~~~~~~~~~~~~~~~~d~-~~~ 180 (571)
......+..+.|+|||+.++...... .|.+.|+++++........ ....+. .+ .+++++ +++
T Consensus 49 --~~h~~~v~~~~~~~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~v~------~~----~~~~~~~~l~ 112 (372)
T 1k8k_C 49 --KEHNGQVTGVDWAPDSNRIVTCGTDR----NAYVWTLKGRTWKPTLVILRINRAAR------CV----RWAPNEKKFA 112 (372)
T ss_dssp --ECCSSCEEEEEEETTTTEEEEEETTS----CEEEEEEETTEEEEEEECCCCSSCEE------EE----EECTTSSEEE
T ss_pred --cCCCCcccEEEEeCCCCEEEEEcCCC----eEEEEECCCCeeeeeEEeecCCCcee------EE----EECCCCCEEE
Confidence 23456788899999999887765433 2777788888754433211 111110 00 233444 666
Q ss_pred EEecCCccEEEEEeCCCce--eeceeec-CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeC--------------
Q 008274 181 ASEKTGFRHLYLHDINGTC--LGPITEG-DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLY-------------- 243 (571)
Q Consensus 181 ~s~~~g~~~l~~~~~~~~~--~~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~-------------- 243 (571)
....+|.-.+|-++..... ...+..+ ...+..+ .|+++++.|+..+. ++ ...+|.+...
T Consensus 113 ~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~~ 188 (372)
T 1k8k_C 113 VGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSL-DWHPNSVLLAAGSC-DF--KCRIFSAYIKEVEERPAPTPWGSK 188 (372)
T ss_dssp EEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEE-EECTTSSEEEEEET-TS--CEEEEECCCTTTSCCCCCBTTBSC
T ss_pred EEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEE-EEcCCCCEEEEEcC-CC--CEEEEEcccccccccccccccccc
Confidence 6666676666666543321 2222222 3345555 49999987766654 33 2555553210
Q ss_pred -CCCCCCCCCCeEecCC-CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 244 -PDWNHTLEAPVKLTNG-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 244 -~~g~~~~~~~~~lt~~-~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
..+. ....+... .....+.++|++++++..... ..+.++++.+++.+..+
T Consensus 189 ~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 189 MPFGE----LMFESSSSCGWVHGVCFSANGSRVAWVSHD----STVCLADADKKMAVATL 240 (372)
T ss_dssp CCTTC----EEEECCCCSSCEEEEEECSSSSEEEEEETT----TEEEEEEGGGTTEEEEE
T ss_pred cchhh----heEecCCCCCeEEEEEECCCCCEEEEEeCC----CEEEEEECCCCceeEEE
Confidence 0011 12223222 234566899999877665432 36888888766654443
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.41 E-value=0.0001 Score=74.97 Aligned_cols=162 Identities=12% Similarity=0.077 Sum_probs=90.2
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECC--CCceEEEEE-eecCCeeeccCCcccCCCCCccCCCe-EEEEEecC
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK--TGQRKVILV-EELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKT 185 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~--~g~~~~l~~-~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~ 185 (571)
.+..++|+|||+.++++...+. . |.+.|+. +|+...... ......+. . ..|++++ +++....+
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg-~--v~iwd~~~~~~~~~~~~~~~~~~~~v~------~----~~~sp~~~~l~~~~~~ 170 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDK-S--LLVFDVDKTSKNVLKLRKRFCFSKRPN------A----ISIAEDDTTVIIADKF 170 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGT-E--EEEEEECSSSSSCEEEEEEEECSSCEE------E----EEECTTSSEEEEEETT
T ss_pred ceEEEEEcCCCCEEEEEECCCC-e--EEEEECcCCCCceeeeeecccCCCCce------E----EEEcCCCCEEEEEeCC
Confidence 5788999999998765554442 2 5555655 776554433 22111111 0 1244554 55555554
Q ss_pred CccEEEEEeCCCceee-----ceeecCeEEEEEEEEeec---CcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeE-e
Q 008274 186 GFRHLYLHDINGTCLG-----PITEGDWMVEQIVGVNEA---SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVK-L 256 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~-----~lT~~~~~~~~~~~~s~d---g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~-l 256 (571)
| .++.+++.+++.. .+......+..+ .|+|+ +++|+.. ..++. ..+| ++. .+. .... +
T Consensus 171 g--~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~-~~sp~~~~~~~l~s~-~~d~~--i~vw--d~~-~~~----~~~~~~ 237 (450)
T 2vdu_B 171 G--DVYSIDINSIPEEKFTQEPILGHVSMLTDV-HLIKDSDGHQFIITS-DRDEH--IKIS--HYP-QCF----IVDKWL 237 (450)
T ss_dssp S--EEEEEETTSCCCSSCCCCCSEECSSCEEEE-EEEECTTSCEEEEEE-ETTSC--EEEE--EES-CTT----CEEEEC
T ss_pred C--cEEEEecCCcccccccceeeecccCceEEE-EEcCCCCCCcEEEEE-cCCCc--EEEE--ECC-CCc----eeeeee
Confidence 4 5788887655433 334333345555 49999 6655544 44432 4454 452 221 2223 2
Q ss_pred cC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 257 TN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 257 t~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.. ......+.|+ ++++++..... ..+.+.++.+++.+..+.
T Consensus 238 ~~h~~~v~~~~~s-d~~~l~s~~~d----~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 238 FGHKHFVSSICCG-KDYLLLSAGGD----DKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp CCCSSCEEEEEEC-STTEEEEEESS----SEEEEEETTTCCEEEEEE
T ss_pred cCCCCceEEEEEC-CCCEEEEEeCC----CeEEEEECCCCcEeeeec
Confidence 22 2334566899 99887654322 378999998887665553
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=98.40 E-value=7.8e-05 Score=71.43 Aligned_cols=206 Identities=14% Similarity=0.145 Sum_probs=113.5
Q ss_pred cCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCC
Q 008274 22 MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGG 101 (571)
Q Consensus 22 ~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~ 101 (571)
-.....+.|||||++|+-...+ + .+.+||+++++.... +
T Consensus 13 ~~~V~~~~fsp~~~~l~s~~~d-g-----------------------------------~v~lWd~~~~~~~~~-~---- 51 (304)
T 2ynn_A 13 SDRVKGIDFHPTEPWVLTTLYS-G-----------------------------------RVELWNYETQVEVRS-I---- 51 (304)
T ss_dssp CSCEEEEEECSSSSEEEEEETT-S-----------------------------------EEEEEETTTTEEEEE-E----
T ss_pred CCceEEEEECCCCCEEEEEcCC-C-----------------------------------cEEEEECCCCceeEE-e----
Confidence 3455688999999988764322 1 468899998765322 2
Q ss_pred CCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEE
Q 008274 102 TDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIW 180 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~ 180 (571)
......+..+.|+||++.++...... .|.+.|+.+|+.......... .+.. + .+++++ +++
T Consensus 52 ---~~~~~~v~~~~~~~~~~~l~s~s~d~----~i~vwd~~~~~~~~~~~~h~~-~v~~------~----~~~~~~~~l~ 113 (304)
T 2ynn_A 52 ---QVTETPVRAGKFIARKNWIIVGSDDF----RIRVFNYNTGEKVVDFEAHPD-YIRS------I----AVHPTKPYVL 113 (304)
T ss_dssp ---ECCSSCEEEEEEEGGGTEEEEEETTS----EEEEEETTTCCEEEEEECCSS-CEEE------E----EECSSSSEEE
T ss_pred ---eccCCcEEEEEEeCCCCEEEEECCCC----EEEEEECCCCcEEEEEeCCCC-cEEE------E----EEcCCCCEEE
Confidence 12345677889999999877765433 488889999886543332111 1110 0 223444 565
Q ss_pred EEecCCccEEEEEeCCCc-ee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC
Q 008274 181 ASEKTGFRHLYLHDINGT-CL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258 (571)
Q Consensus 181 ~s~~~g~~~l~~~~~~~~-~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~ 258 (571)
....+|.-. ++++.++ .. ..+......+... .|+|++..+++++..++. ..+| ++. .+. ....+..
T Consensus 114 sgs~D~~v~--lWd~~~~~~~~~~~~~h~~~v~~v-~~~p~~~~~l~sgs~D~~--v~iw--d~~-~~~----~~~~~~~ 181 (304)
T 2ynn_A 114 SGSDDLTVK--LWNWENNWALEQTFEGHEHFVMCV-AFNPKDPSTFASGCLDRT--VKVW--SLG-QST----PNFTLTT 181 (304)
T ss_dssp EEETTSCEE--EEEGGGTTEEEEEECCCCSCEEEE-EECTTCTTEEEEEETTSE--EEEE--ETT-CSS----CSEEEEC
T ss_pred EECCCCeEE--EEECCCCcchhhhhcccCCcEEEE-EECCCCCCEEEEEeCCCe--EEEE--ECC-CCC----ccceecc
Confidence 656666544 4454433 22 2333333345555 489855445556555542 4454 442 111 2223332
Q ss_pred C--CceEEEEECC--CCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 259 G--KGKHVAVLDH--NMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 259 ~--~g~~~~~~s~--~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
. .+.....+++ ++++++- .+.. ..+.+.++.+++.+..+.
T Consensus 182 ~~~~~v~~~~~~~~~~~~~l~s-~s~D---~~i~iWd~~~~~~~~~~~ 225 (304)
T 2ynn_A 182 GQERGVNYVDYYPLPDKPYMIT-ASDD---LTIKIWDYQTKSCVATLE 225 (304)
T ss_dssp CCTTCEEEEEECCSTTCCEEEE-EETT---SEEEEEETTTTEEEEEEE
T ss_pred CCcCcEEEEEEEEcCCCCEEEE-EcCC---CeEEEEeCCCCccceeeC
Confidence 2 2334445655 6665543 3332 368888887776655554
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=98.38 E-value=8.9e-05 Score=74.00 Aligned_cols=156 Identities=13% Similarity=0.089 Sum_probs=82.1
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecCC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTG 186 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g 186 (571)
+.++..+.|+|||++++...... .|.+.|+++++.......... .+. .+ .+++++ .++....+|
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~----~i~iwd~~~~~~~~~~~~h~~-~v~------~~----~~~p~~~~l~s~s~d~ 187 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDR----LIRIWDIENRKIVMILQGHEQ-DIY------SL----DYFPSGDKLVSGSGDR 187 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTS----CEEEEETTTTEEEEEECCCSS-CEE------EE----EECTTSSEEEEEETTS
T ss_pred ceeEEEEEECCCCCEEEEEcCCC----eEEEEECCCCcEEEEEccCCC-CEE------EE----EEcCCCCEEEEecCCC
Confidence 34578899999999887765433 388889999876544332111 111 00 233443 555554555
Q ss_pred ccEEEEEeCCCceeeceeecCeEEEEEEEEee-cCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec--------
Q 008274 187 FRHLYLHDINGTCLGPITEGDWMVEQIVGVNE-ASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-------- 257 (571)
Q Consensus 187 ~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt-------- 257 (571)
.|.++++.+++..........+... .++| +++.|+.. ..++. ..+| ++. .+. ....+.
T Consensus 188 --~v~iwd~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~~~-s~d~~--v~iw--d~~-~~~----~~~~~~~~~~~~~~ 254 (393)
T 1erj_A 188 --TVRIWDLRTGQCSLTLSIEDGVTTV-AVSPGDGKYIAAG-SLDRA--VRVW--DSE-TGF----LVERLDSENESGTG 254 (393)
T ss_dssp --EEEEEETTTTEEEEEEECSSCEEEE-EECSTTCCEEEEE-ETTSC--EEEE--ETT-TCC----EEEEEC------CC
T ss_pred --cEEEEECCCCeeEEEEEcCCCcEEE-EEECCCCCEEEEE-cCCCc--EEEE--ECC-CCc----EEEeecccccCCCC
Confidence 4666677766543322222234444 4888 66655544 44432 4444 441 121 122221
Q ss_pred CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 258 NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 258 ~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
.......+.|+|+|++++.. +.. ..+.+.++.+.
T Consensus 255 h~~~v~~v~~~~~g~~l~s~-s~d---~~v~~wd~~~~ 288 (393)
T 1erj_A 255 HKDSVYSVVFTRDGQSVVSG-SLD---RSVKLWNLQNA 288 (393)
T ss_dssp CSSCEEEEEECTTSSEEEEE-ETT---SEEEEEEC---
T ss_pred CCCCEEEEEECCCCCEEEEE-eCC---CEEEEEECCCC
Confidence 11234566899999877543 322 36777776443
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=98.37 E-value=1.6e-06 Score=85.15 Aligned_cols=116 Identities=14% Similarity=0.078 Sum_probs=64.4
Q ss_pred eEEEEEcCCCCceee----cccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHH--
Q 008274 350 KTLISVYGGPCVQLV----CDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEW-- 423 (571)
Q Consensus 350 P~vv~~hGg~~~~~~----~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-- 423 (571)
|.||++||..+.... ...|......+++.|+++||.|+++|+||+|.+..... ........ ...|..+.+..
T Consensus 7 ~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~~a~-~l~~~i~~-~~vDy~~~~a~~~ 84 (387)
T 2dsn_A 7 APIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDRAC-EAYAQLVG-GTVDYGAAHAAKH 84 (387)
T ss_dssp CCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHHHHH-HHHHHHHC-EEEECCHHHHHHH
T ss_pred CcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccccHH-HHHHHHHh-hhhhhhhhhhhhc
Confidence 457789997654210 01232211034588999999999999999875432100 00000000 00000011100
Q ss_pred -----------HHHcCCCcCCcEEEEeechHHHHHHHHHhc-------------------CC------CeeEEEEEcCcc
Q 008274 424 -----------LIKQGLAKVGHIGLYGWSYGGYLSAITLAR-------------------FP------DVFQCAVSGAPV 467 (571)
Q Consensus 424 -----------l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~-------------------~~------~~~~~~v~~~~~ 467 (571)
+.+. .....++.|+||||||.++..++.. +| ++++.++.+++.
T Consensus 85 ~~~~~~~~l~~ll~~-~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP 163 (387)
T 2dsn_A 85 GHARFGRTYPGLLPE-LKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATP 163 (387)
T ss_dssp TSCSEEEEECCSCGG-GGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCC
T ss_pred cchhhhhhHHHHHHH-hcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCC
Confidence 0000 0134789999999999999998872 35 688888887764
Q ss_pred C
Q 008274 468 T 468 (571)
Q Consensus 468 ~ 468 (571)
.
T Consensus 164 ~ 164 (387)
T 2dsn_A 164 H 164 (387)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=98.35 E-value=4.8e-05 Score=74.82 Aligned_cols=190 Identities=12% Similarity=0.087 Sum_probs=103.1
Q ss_pred eEEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc--CccEEEEEEECCCCceEEEEEeecCC
Q 008274 79 KVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS--QTKLKVLKFDIKTGQRKVILVEELDS 156 (571)
Q Consensus 79 ~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~--~~~~~i~~~d~~~g~~~~l~~~~~~~ 156 (571)
...+|.+|.++|+.+.+... .......++|||||+++++...+. .....+|.++.++|+.+.+.......
T Consensus 28 ~i~~~~~d~~~g~~~~~~~~--------~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~ 99 (361)
T 3scy_A 28 GIYTFRFNEETGESLPLSDA--------EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG 99 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEE--------ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS
T ss_pred CEEEEEEeCCCCCEEEeecc--------cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC
Confidence 34566777788887766441 122233468999999887776642 24556788888889887776543211
Q ss_pred eeeccCCcccCCCCCccCCCeEEEEEec-CCccEEEEEeCC-Cceeeceee-----c---------CeEEEEEEEEeecC
Q 008274 157 WVNLHDCFTPLDKGVTKYSGGFIWASEK-TGFRHLYLHDIN-GTCLGPITE-----G---------DWMVEQIVGVNEAS 220 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~d~~~~~s~~-~g~~~l~~~~~~-~~~~~~lT~-----~---------~~~~~~~~~~s~dg 220 (571)
.. +... .. ++++++.++. ++ .+.+++++ ++....+.. + ......+ .|+|||
T Consensus 100 ~~-------p~~~--~~-dg~~l~~~~~~~~--~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~spdg 166 (361)
T 3scy_A 100 AD-------PCYL--TT-NGKNIVTANYSGG--SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCV-RITPDG 166 (361)
T ss_dssp SC-------EEEE--EE-CSSEEEEEETTTT--EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEE-EECTTS
T ss_pred CC-------cEEE--EE-CCCEEEEEECCCC--EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEE-EECCCC
Confidence 00 1100 12 2234555443 44 34555543 222222211 0 0012334 599999
Q ss_pred cEEEEEEcCCCCceeEEEEEEeCCCCCC---C-CC-----CCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEE
Q 008274 221 GQVYFTGTLDGPLESHLYCAKLYPDWNH---T-LE-----APVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCS 291 (571)
Q Consensus 221 ~~l~~~~~~~~~~~~~l~~~~l~~~g~~---~-~~-----~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~ 291 (571)
++||+.....+ ...+|.++. .+.. . +. ....+....+...+.|||||+++++.... ...+.+++
T Consensus 167 ~~l~~~~~~~~--~v~v~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~~ 239 (361)
T 3scy_A 167 KYLLADDLGTD--QIHKFNINP--NANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI---GGTVIAFR 239 (361)
T ss_dssp SEEEEEETTTT--EEEEEEECT--TCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT---TCEEEEEE
T ss_pred CEEEEEeCCCC--EEEEEEEcC--CCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC---CCeEEEEE
Confidence 99998875444 356665553 2210 0 00 01122334455667999999977665432 23688888
Q ss_pred cCCCc
Q 008274 292 LQDGS 296 (571)
Q Consensus 292 ~~~~~ 296 (571)
+.+++
T Consensus 240 ~~~g~ 244 (361)
T 3scy_A 240 YADGM 244 (361)
T ss_dssp EETTE
T ss_pred ecCCc
Confidence 76554
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.35 E-value=2.2e-05 Score=75.44 Aligned_cols=210 Identities=11% Similarity=0.079 Sum_probs=114.0
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
....++.|+|||++|.|+.... . .|+.++.+ ++.+.+..
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~-~----------------------------------~i~~~~~~-g~~~~~~~----- 83 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVG-R----------------------------------RVLGWRED-GTVDVLLD----- 83 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTT-T----------------------------------EEEEEETT-SCEEEEEE-----
T ss_pred cCccCCeEeCCCCEEEEEECCC-C----------------------------------EEEEEeCC-CCEEEEeC-----
Confidence 3457899999999998853221 1 46777874 44444432
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWAS 182 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s 182 (571)
.......+.|++||++++.. ... ..|+++|.+ |+.+.+....... .+.. ......++++-++++
T Consensus 84 ----~~~~~~gl~~d~dG~l~v~~-~~~---~~v~~~~~~-g~~~~~~~~~~~~------~~~~-~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 84 ----ATAFTNGNAVDAQQRLVHCE-HGR---RAITRSDAD-GQAHLLVGRYAGK------RLNS-PNDLIVARDGAIWFT 147 (305)
T ss_dssp ----SCSCEEEEEECTTSCEEEEE-TTT---TEEEEECTT-SCEEEEECEETTE------ECSC-CCCEEECTTSCEEEE
T ss_pred ----CCCccceeeECCCCCEEEEE-CCC---CEEEEECCC-CCEEEEEeccCCC------ccCC-CCCEEECCCCCEEEe
Confidence 23356678999999854432 221 248999987 7766664332210 0000 001123556633343
Q ss_pred ec----------------CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCC-ceeEEEEEEeCCC
Q 008274 183 EK----------------TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGP-LESHLYCAKLYPD 245 (571)
Q Consensus 183 ~~----------------~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~~~l~~~~l~~~ 245 (571)
+. .+...||+++.++++.+.++ +......+ .|++||+.||+......+ ....|+++++.
T Consensus 148 d~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl-~~spdg~~lyv~~~~~~~~~~~~i~~~~~~-- 223 (305)
T 3dr2_A 148 DPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGL-AFSPDEQTLYVSQTPEQGHGSVEITAFAWR-- 223 (305)
T ss_dssp CCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEE-EECTTSSEEEEEECCC---CCCEEEEEEEE--
T ss_pred CcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcce-EEcCCCCEEEEEecCCcCCCCCEEEEEEec--
Confidence 21 12368999998777777666 22122334 499999999998764310 12567777772
Q ss_pred CCCCCCCCeEecC-CCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 246 WNHTLEAPVKLTN-GKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 246 g~~~~~~~~~lt~-~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
+.. ....+.+.. ..+ -....++++|+. ++.. ...+++++. +++.+..+
T Consensus 224 ~~~-l~~~~~~~~~~~~~pdgi~~d~~G~l--wv~~----~~gv~~~~~-~g~~~~~~ 273 (305)
T 3dr2_A 224 DGA-LHDRRHFASVPDGLPDGFCVDRGGWL--WSSS----GTGVCVFDS-DGQLLGHI 273 (305)
T ss_dssp TTE-EEEEEEEECCSSSCCCSEEECTTSCE--EECC----SSEEEEECT-TSCEEEEE
T ss_pred CCC-ccCCeEEEECCCCCCCeEEECCCCCE--EEec----CCcEEEECC-CCCEEEEE
Confidence 210 001112111 111 123467888873 3332 225888776 56554444
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=98.35 E-value=7.4e-05 Score=74.74 Aligned_cols=183 Identities=9% Similarity=0.001 Sum_probs=100.2
Q ss_pred EEEEEECCCCce--------EEEeccCCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEEEE
Q 008274 81 RLGVVSAAGGPV--------SWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 81 ~l~~~dl~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~ 151 (571)
.|.+||+.+++. ..+ ......+..+.|+|||+ +++...... .|.+.|+.+++......
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~---------~~h~~~v~~~~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~ 171 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITL---------EGHTKRVGIVAWHPTAQNVLLSAGCDN----VILVWDVGTGAAVLTLG 171 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEE---------ECCSSCEEEEEECSSBTTEEEEEETTS----CEEEEETTTTEEEEEEC
T ss_pred eEEEEEccCCCCccccCCceEEe---------cCCCCeEEEEEECcCCCCEEEEEcCCC----EEEEEECCCCCccEEEe
Confidence 467888887631 222 23456788899999995 555554333 38888999987644331
Q ss_pred -eecCCeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceee-ceeec-Ce-EEEEEEEEeecCcEEEEE
Q 008274 152 -EELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLG-PITEG-DW-MVEQIVGVNEASGQVYFT 226 (571)
Q Consensus 152 -~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~-~lT~~-~~-~~~~~~~~s~dg~~l~~~ 226 (571)
......+. .+ .|++++ +++....+| .|.++++.+++.. .+..+ .. .+... .|+++++.|+..
T Consensus 172 ~~~~~~~v~------~~----~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~g 238 (402)
T 2aq5_A 172 PDVHPDTIY------SV----DWSRDGALICTSCRDK--RVRVIEPRKGTVVAEKDRPHEGTRPVHA-VFVSEGKILTTG 238 (402)
T ss_dssp TTTCCSCEE------EE----EECTTSSCEEEEETTS--EEEEEETTTTEEEEEEECSSCSSSCCEE-EECSTTEEEEEE
T ss_pred cCCCCCceE------EE----EECCCCCEEEEEecCC--cEEEEeCCCCceeeeeccCCCCCcceEE-EEcCCCcEEEEe
Confidence 11111111 00 234444 555555555 5777887766543 33122 11 13344 489998766655
Q ss_pred EcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 227 GTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 227 ~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
.+... ...|..+++.. +. .......+....+...+.++|++++++...+.. ..+.++++.+++
T Consensus 239 ~~~~~--d~~i~iwd~~~-~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d---g~i~i~d~~~~~ 301 (402)
T 2aq5_A 239 FSRMS--ERQVALWDTKH-LE-EPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD---SSIRYFEITSEA 301 (402)
T ss_dssp ECTTC--CEEEEEEETTB-CS-SCSEEEECCCCSSCEEEEEETTTTEEEEEETTC---SCEEEEEECSST
T ss_pred ccCCC--CceEEEEcCcc-cc-CCceEEeccCCCceeEEEEcCCCCEEEEEEcCC---CeEEEEEecCCC
Confidence 43222 25666677621 21 100122223334556679999999876655432 267777876665
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=98.34 E-value=2.2e-05 Score=79.61 Aligned_cols=187 Identities=10% Similarity=0.046 Sum_probs=106.3
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEcc-CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-Ceee
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVN 159 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp-Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~ 159 (571)
|.+||+++++...+... .+....+..+.|+| |+++++..+... .|.+.|++++..+.+...... .+..
T Consensus 144 i~lWd~~~~~~~~~~~~------~gH~~~V~~l~f~p~~~~~l~s~s~D~----~v~iwd~~~~~~~~~~~~~~~~~~~~ 213 (435)
T 4e54_B 144 IMLWNFGIKDKPTFIKG------IGAGGSITGLKFNPLNTNQFYASSMEG----TTRLQDFKGNILRVFASSDTINIWFC 213 (435)
T ss_dssp EEEECSSCCSCCEEECC------CSSSCCCCEEEECSSCTTEEEEECSSS----CEEEEETTSCEEEEEECCSSCSCCCC
T ss_pred EEEEECCCCCceeEEEc------cCCCCCEEEEEEeCCCCCEEEEEeCCC----EEEEeeccCCceeEEeccCCCCccEE
Confidence 68889987664433211 23456788899998 677766554332 277779988766555432211 1110
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
. ..+++++ +++....+| .|+++++.+.....+......+..+. |+|+++.+++++..++. ..+|
T Consensus 214 ------~----~~~~~~~~~l~~g~~dg--~i~~wd~~~~~~~~~~~h~~~v~~v~-~~p~~~~~~~s~s~d~~--v~iw 278 (435)
T 4e54_B 214 ------S----LDVSASSRMVVTGDNVG--NVILLNMDGKELWNLRMHKKKVTHVA-LNPCCDWFLATASVDQT--VKIW 278 (435)
T ss_dssp ------C----EEEETTTTEEEEECSSS--BEEEEESSSCBCCCSBCCSSCEEEEE-ECTTCSSEEEEEETTSB--CCEE
T ss_pred ------E----EEECCCCCEEEEEeCCC--cEeeeccCcceeEEEecccceEEeee-ecCCCceEEEEecCcce--eeEE
Confidence 0 1234444 555555555 46677777776666655444566654 99999888888776653 4555
Q ss_pred EEEeCCCCCCCCCCCeEe-cCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 239 CAKLYPDWNHTLEAPVKL-TNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~l-t~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
++. .+. ........ ........+.|+|+|++++..... ..+.+.++.+++....+
T Consensus 279 --d~~-~~~-~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D----~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 279 --DLR-QVR-GKASFLYSLPHRHPVNAACFSPDGARLLTTDQK----SEIRVYSASQWDCPLGL 334 (435)
T ss_dssp --ETT-TCC-SSSCCSBCCBCSSCEEECCBCTTSSEEEEEESS----SCEEEEESSSSSSEEEE
T ss_pred --ecc-ccc-ccceEEEeeeccccccceeECCCCCeeEEEcCC----CEEEEEECCCCccceEE
Confidence 442 111 00011111 112234556899999987654332 25788888776654444
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=98.32 E-value=2.9e-05 Score=82.59 Aligned_cols=204 Identities=12% Similarity=0.047 Sum_probs=117.5
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
....+.|||||++|||.. . . .+.++|+++++.... +
T Consensus 20 ~~~~~~~spdg~~l~~~~-~--~----------------------------------~v~l~~~~~~~~~~~-~------ 55 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN-G--T----------------------------------SVYTVPVGSLTDTEI-Y------ 55 (611)
T ss_dssp CCCCCEECTTSSEEEEEE-T--T----------------------------------EEEEEETTCSSCCEE-E------
T ss_pred ceeEEeeCCCCCEEEeCC-C--C----------------------------------EEEEecCCCcccCeE-e------
Confidence 345678999999999864 1 1 357788886654332 1
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCeeeccCCcccCCCCCccCCCe--EEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVNLHDCFTPLDKGVTKYSGG--FIW 180 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~~~~~~~~~~~~~~~~~~d~--~~~ 180 (571)
.+....+..++|||||++++...... .|.+.|+++++...+.... ....+. . ..|++|+ ++.
T Consensus 56 -~~h~~~v~~~~~spdg~~lasg~~d~----~v~lWd~~~~~~~~~~~~~~~~~~v~------~----v~fs~dg~~l~~ 120 (611)
T 1nr0_A 56 -TEHSHQTTVAKTSPSGYYCASGDVHG----NVRIWDTTQTTHILKTTIPVFSGPVK------D----ISWDSESKRIAA 120 (611)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEETTS----EEEEEESSSTTCCEEEEEECSSSCEE------E----EEECTTSCEEEE
T ss_pred -cCCCCceEEEEECCCCcEEEEEeCCC----CEEEeECCCCcceeeEeecccCCceE------E----EEECCCCCEEEE
Confidence 23455688899999999888775433 3777788766543222211 111111 0 1344554 333
Q ss_pred EEec-CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC-
Q 008274 181 ASEK-TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN- 258 (571)
Q Consensus 181 ~s~~-~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~- 258 (571)
.++. +....+++++. +.....+......+..+ .|+|+++.+++++..++. ..+|. .. .+. ....+..
T Consensus 121 ~~~~~~~~~~v~~wd~-~~~~~~l~gh~~~v~~v-~f~p~~~~~l~s~s~D~~--v~lwd--~~-~~~----~~~~l~~H 189 (611)
T 1nr0_A 121 VGEGRERFGHVFLFDT-GTSNGNLTGQARAMNSV-DFKPSRPFRIISGSDDNT--VAIFE--GP-PFK----FKSTFGEH 189 (611)
T ss_dssp EECCSSCSEEEEETTT-CCBCBCCCCCSSCEEEE-EECSSSSCEEEEEETTSC--EEEEE--TT-TBE----EEEEECCC
T ss_pred EECCCCceeEEEEeeC-CCCcceecCCCCCceEE-EECCCCCeEEEEEeCCCe--EEEEE--CC-CCe----Eeeeeccc
Confidence 3332 33457888774 33334455444456655 499999876667666653 55553 31 111 1222332
Q ss_pred CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 259 GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 259 ~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
......+.|+|||++++-. +.. ..+.+.+..+++....+
T Consensus 190 ~~~V~~v~fspdg~~las~-s~D---~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 190 TKFVHSVRYNPDGSLFAST-GGD---GTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp SSCEEEEEECTTSSEEEEE-ETT---SCEEEEETTTCCEEEEC
T ss_pred cCceEEEEECCCCCEEEEE-ECC---CcEEEEECCCCcEeeee
Confidence 2235567999999876543 332 25777787777765555
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.32 E-value=5.8e-05 Score=75.64 Aligned_cols=207 Identities=12% Similarity=0.073 Sum_probs=114.6
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
....+.|||||++|+....+ + .|.+||..+.....+
T Consensus 110 ~v~~~~~s~~~~~l~~~~~d-g-----------------------------------~i~i~~~~~~~~~~~-------- 145 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVEN-G-----------------------------------ELRLWNKTGALLNVL-------- 145 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT-S-----------------------------------CEEEEETTSCEEEEE--------
T ss_pred ceEEEEEcCCCCEEEEEeCC-C-----------------------------------eEEEEeCCCCeeeec--------
Confidence 34678899999999875322 1 257778554444443
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCC--------eeeccCCcccCCCCCccCC
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS--------WVNLHDCFTPLDKGVTKYS 175 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~--------w~~~~~~~~~~~~~~~~~~ 175 (571)
......+..+.|+|||+.++...... .|...|+.+++........... .......... ..+.+
T Consensus 146 -~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 216 (425)
T 1r5m_A 146 -NFHRAPIVSVKWNKDGTHIISMDVEN----VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVD----VEWVD 216 (425)
T ss_dssp -CCCCSCEEEEEECTTSSEEEEEETTC----CEEEEETTTTEEEEEECCC---------------CCCBSC----CEEEE
T ss_pred -cCCCccEEEEEECCCCCEEEEEecCC----eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeE----EEEcC
Confidence 22456788899999999877665433 3888999988765433221110 0000000001 13344
Q ss_pred CeEEEEEecCCccEEEEEeCCCceee-ceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCe
Q 008274 176 GGFIWASEKTGFRHLYLHDINGTCLG-PITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPV 254 (571)
Q Consensus 176 d~~~~~s~~~g~~~l~~~~~~~~~~~-~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~ 254 (571)
++.++....+| .|+++++.+++.. .+......+..+ .|+++++.|+..+. ++ .++.+++. .+. ...
T Consensus 217 ~~~~~~~~~~g--~i~~~d~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~~~-d~----~i~i~d~~-~~~----~~~ 283 (425)
T 1r5m_A 217 DDKFVIPGPKG--AIFVYQITEKTPTGKLIGHHGPISVL-EFNDTNKLLLSASD-DG----TLRIWHGG-NGN----SQN 283 (425)
T ss_dssp TTEEEEECGGG--CEEEEETTCSSCSEEECCCSSCEEEE-EEETTTTEEEEEET-TS----CEEEECSS-SBS----CSE
T ss_pred CCEEEEEcCCC--eEEEEEcCCCceeeeeccCCCceEEE-EECCCCCEEEEEcC-CC----EEEEEECC-CCc----cce
Confidence 55554444444 5777777665432 333333345555 49999997766653 33 23444542 221 334
Q ss_pred EecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 255 KLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 255 ~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.+.. ......+.++|++ .++ +.+.. ..+.++++.+++.+..+
T Consensus 284 ~~~~~~~~i~~~~~~~~~-~l~-~~~~d---~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 284 CFYGHSQSIVSASWVGDD-KVI-SCSMD---GSVRLWSLKQNTLLALS 326 (425)
T ss_dssp EECCCSSCEEEEEEETTT-EEE-EEETT---SEEEEEETTTTEEEEEE
T ss_pred EecCCCccEEEEEECCCC-EEE-EEeCC---CcEEEEECCCCcEeEec
Confidence 4442 2334566899998 443 33332 37888888776655444
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=98.31 E-value=4.2e-05 Score=81.03 Aligned_cols=205 Identities=12% Similarity=0.082 Sum_probs=119.7
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCC----ceEEEecc
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG----PVSWMDLQ 98 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~----~~~~~~~~ 98 (571)
.....+.|||||++||+.. + + .+.+||++++ +.... +
T Consensus 19 ~~v~~~~~spdg~~l~~~~-~--~----------------------------------~v~v~~~~~~~~~~~~~~~-~- 59 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC-G--K----------------------------------SAFVRCLDDGDSKVPPVVQ-F- 59 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE-T--T----------------------------------EEEEEECCSSCCSSCSEEE-E-
T ss_pred CceeEEEECCCCCEEEEec-C--C----------------------------------eEEEEECCCCCCccccceE-E-
Confidence 3467899999999999965 1 1 4688899877 43322 1
Q ss_pred CCCCCCCCCCce-eEEEEEcc--CCeEEEEEEeccCccEEEEEEECCCC------ceEEEEEeec-CCeeeccCCcccCC
Q 008274 99 CGGTDQNYDEEY-LARVNWMH--GNILTAQVLNRSQTKLKVLKFDIKTG------QRKVILVEEL-DSWVNLHDCFTPLD 168 (571)
Q Consensus 99 ~~~~~~~~~~~~-~~~~~wsp--Dg~~i~~~~~r~~~~~~i~~~d~~~g------~~~~l~~~~~-~~w~~~~~~~~~~~ 168 (571)
...... +..+.|+| ||++++...... .|.+.|+.++ +.+.+..... ...+. .+
T Consensus 60 ------~~h~~~~v~~~~~sp~~~~~~l~s~~~dg----~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~------~~- 122 (615)
T 1pgu_A 60 ------TGHGSSVVTTVKFSPIKGSQYLCSGDESG----KVIVWGWTFDKESNSVEVNVKSEFQVLAGPIS------DI- 122 (615)
T ss_dssp ------CTTTTSCEEEEEECSSTTCCEEEEEETTS----EEEEEEEEEEGGGTEEEEEEEEEEECCSSCEE------EE-
T ss_pred ------ecCCCceEEEEEECcCCCCCEEEEecCCC----EEEEEeCCCCcccccccccccchhhcccccEE------EE-
Confidence 234556 88899999 999887765432 3666777655 3333322111 11111 11
Q ss_pred CCCccCCCe-EEE-EEec-CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCC
Q 008274 169 KGVTKYSGG-FIW-ASEK-TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPD 245 (571)
Q Consensus 169 ~~~~~~~d~-~~~-~s~~-~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~ 245 (571)
.+++++ +++ .+.. ++...|++++ .+.....+......+..+ .|+|+++.+++++..++. ..+| ++. .
T Consensus 123 ---~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~~~~~d~~--v~vw--d~~-~ 192 (615)
T 1pgu_A 123 ---SWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSGHSQRINAC-HLKQSRPMRSMTVGDDGS--VVFY--QGP-P 192 (615)
T ss_dssp ---EECTTSSEEEEEECCSSCSEEEEETT-TCCEEEECCSCSSCEEEE-EECSSSSCEEEEEETTTE--EEEE--ETT-T
T ss_pred ---EEeCCCCEEEEeccCCCCccEEEEEE-CCCcceeeecCCccEEEE-EECCCCCcEEEEEeCCCc--EEEE--eCC-C
Confidence 234444 333 3322 3346788887 344445555444455555 499999866666665542 4444 441 1
Q ss_pred CCCCCCCCeEecCC-C---ceEEEEECCC-CCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 246 WNHTLEAPVKLTNG-K---GKHVAVLDHN-MRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 246 g~~~~~~~~~lt~~-~---g~~~~~~s~~-g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
+. ....+... . ....+.++|+ +++++..... ..+.+.++.+++.+..+
T Consensus 193 ~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 193 FK----FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD----RKISCFDGKSGEFLKYI 245 (615)
T ss_dssp BE----EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT----CCEEEEETTTCCEEEEC
T ss_pred cc----eeeeecccCCCCceEEEEEECCCCCCEEEEEeCC----CeEEEEECCCCCEeEEe
Confidence 11 22233322 2 3456689999 8877665433 36888898888776666
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=98.30 E-value=0.00042 Score=69.00 Aligned_cols=184 Identities=14% Similarity=0.091 Sum_probs=97.8
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
|.+||+++++.... + ......+..+.|+|||+.++...... .|.+.|+.++++........... .
T Consensus 147 i~iwd~~~~~~~~~-~-------~~h~~~v~~~~~~p~~~~l~s~s~d~----~v~iwd~~~~~~~~~~~~~~~v~-~-- 211 (393)
T 1erj_A 147 IRIWDIENRKIVMI-L-------QGHEQDIYSLDYFPSGDKLVSGSGDR----TVRIWDLRTGQCSLTLSIEDGVT-T-- 211 (393)
T ss_dssp EEEEETTTTEEEEE-E-------CCCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTTEEEEEEECSSCEE-E--
T ss_pred EEEEECCCCcEEEE-E-------ccCCCCEEEEEEcCCCCEEEEecCCC----cEEEEECCCCeeEEEEEcCCCcE-E--
Confidence 68899998875433 2 23456788899999999877655433 47888999988654433222100 0
Q ss_pred CCcccCCCCCccCC-Ce-EEEEEecCCccEEEEEeCCCcee-ecee-------ecCeEEEEEEEEeecCcEEEEEEcCCC
Q 008274 162 DCFTPLDKGVTKYS-GG-FIWASEKTGFRHLYLHDINGTCL-GPIT-------EGDWMVEQIVGVNEASGQVYFTGTLDG 231 (571)
Q Consensus 162 ~~~~~~~~~~~~~~-d~-~~~~s~~~g~~~l~~~~~~~~~~-~~lT-------~~~~~~~~~~~~s~dg~~l~~~~~~~~ 231 (571)
+ .+++ ++ +++....+|. |.++++.+++. ..+. .....+..+ .|+++|+.|+..+ .++
T Consensus 212 -----~----~~~~~~~~~l~~~s~d~~--v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v-~~~~~g~~l~s~s-~d~ 278 (393)
T 1erj_A 212 -----V----AVSPGDGKYIAAGSLDRA--VRVWDSETGFLVERLDSENESGTGHKDSVYSV-VFTRDGQSVVSGS-LDR 278 (393)
T ss_dssp -----E----EECSTTCCEEEEEETTSC--EEEEETTTCCEEEEEC------CCCSSCEEEE-EECTTSSEEEEEE-TTS
T ss_pred -----E----EEECCCCCEEEEEcCCCc--EEEEECCCCcEEEeecccccCCCCCCCCEEEE-EECCCCCEEEEEe-CCC
Confidence 0 1222 33 5555555554 55556655432 2331 122234555 4999998776544 343
Q ss_pred CceeEEEEEEeCCCCCCCC-------CCCeEec-CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 232 PLESHLYCAKLYPDWNHTL-------EAPVKLT-NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 232 ~~~~~l~~~~l~~~g~~~~-------~~~~~lt-~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
...+|.+.- ...... .....+. .......+.+++++++++.. +.. ..+.+.+..+++.+..+
T Consensus 279 --~v~~wd~~~--~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg-s~D---~~v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 279 --SVKLWNLQN--ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSG-SKD---RGVLFWDKKSGNPLLML 348 (393)
T ss_dssp --EEEEEEC-----------------CEEEEEECCSSCEEEEEECGGGCEEEEE-ETT---SEEEEEETTTCCEEEEE
T ss_pred --EEEEEECCC--CCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEE-eCC---CeEEEEECCCCeEEEEE
Confidence 255554321 110000 0011111 12224456889998876543 332 36788887766654443
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=98.30 E-value=4.4e-05 Score=81.14 Aligned_cols=216 Identities=12% Similarity=0.019 Sum_probs=115.5
Q ss_pred cccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCc
Q 008274 12 GLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP 91 (571)
Q Consensus 12 g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~ 91 (571)
|...-++.+.-.....+.|||||++||=...+ ..+.+||+++++
T Consensus 49 ~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d------------------------------------~~v~lWd~~~~~ 92 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH------------------------------------GNVRIWDTTQTT 92 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECTTSSEEEEEETT------------------------------------SEEEEEESSSTT
T ss_pred cccCeEecCCCCceEEEEECCCCcEEEEEeCC------------------------------------CCEEEeECCCCc
Confidence 44444444444445678899999988764432 146888987654
Q ss_pred eEE-EeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE-EEEEeecCCeeeccCCcccCCC
Q 008274 92 VSW-MDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK-VILVEELDSWVNLHDCFTPLDK 169 (571)
Q Consensus 92 ~~~-~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~-~l~~~~~~~w~~~~~~~~~~~~ 169 (571)
... ..+ ......+..++|+|||+.++...........|+..|. |+.. .+..+. ..+. .+
T Consensus 93 ~~~~~~~-------~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~--~~v~------~v-- 153 (611)
T 1nr0_A 93 HILKTTI-------PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTGQA--RAMN------SV-- 153 (611)
T ss_dssp CCEEEEE-------ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCCCCS--SCEE------EE--
T ss_pred ceeeEee-------cccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceecCCC--CCce------EE--
Confidence 322 222 1234578889999999988876654333345666663 3321 111111 1110 00
Q ss_pred CCccCCCe--EEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCC
Q 008274 170 GVTKYSGG--FIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDW 246 (571)
Q Consensus 170 ~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g 246 (571)
.+++++ .++....++.-. +++...++. ..+......+..+ .|+|||+.|+..+. ++. ..|| ++. .+
T Consensus 154 --~f~p~~~~~l~s~s~D~~v~--lwd~~~~~~~~~l~~H~~~V~~v-~fspdg~~las~s~-D~~--i~lw--d~~-~g 222 (611)
T 1nr0_A 154 --DFKPSRPFRIISGSDDNTVA--IFEGPPFKFKSTFGEHTKFVHSV-RYNPDGSLFASTGG-DGT--IVLY--NGV-DG 222 (611)
T ss_dssp --EECSSSSCEEEEEETTSCEE--EEETTTBEEEEEECCCSSCEEEE-EECTTSSEEEEEET-TSC--EEEE--ETT-TC
T ss_pred --EECCCCCeEEEEEeCCCeEE--EEECCCCeEeeeeccccCceEEE-EECCCCCEEEEEEC-CCc--EEEE--ECC-CC
Confidence 233443 344445555444 445544433 3344333345555 49999986665543 432 4554 331 22
Q ss_pred CCCCCCCeEe--------cCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 247 NHTLEAPVKL--------TNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 247 ~~~~~~~~~l--------t~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
. ....+ ........+.|+|||++++-. +.. ..+.+.++.+++..+.+
T Consensus 223 ~----~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~-s~D---~~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 223 T----KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA-SAD---KTIKIWNVATLKVEKTI 277 (611)
T ss_dssp C----EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE-ETT---SEEEEEETTTTEEEEEE
T ss_pred c----EeeeeccccccccccCCCEEEEEECCCCCEEEEE-eCC---CeEEEEeCCCCceeeee
Confidence 1 12222 122335567999999977543 332 36888888777665544
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=98.29 E-value=0.00012 Score=70.25 Aligned_cols=122 Identities=16% Similarity=0.113 Sum_probs=70.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.+||+.+++.... + ......+..+.|+||++.++...... .|.+.|+.+++.......... .+.
T Consensus 88 ~i~vwd~~~~~~~~~-~-------~~~~~~v~~~~~~~~~~~l~s~~~d~----~i~iwd~~~~~~~~~~~~~~~-~v~- 153 (312)
T 4ery_A 88 TLKIWDVSSGKCLKT-L-------KGHSNYVFCCNFNPQSNLIVSGSFDE----SVRIWDVKTGKCLKTLPAHSD-PVS- 153 (312)
T ss_dssp EEEEEETTTCCEEEE-E-------ECCSSCEEEEEECSSSSEEEEEETTS----CEEEEETTTCCEEEEECCCSS-CEE-
T ss_pred EEEEEECCCCcEEEE-E-------cCCCCCEEEEEEcCCCCEEEEEeCCC----cEEEEECCCCEEEEEecCCCC-cEE-
Confidence 468899998775432 1 12455678899999999877665443 388889998876433221111 010
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee-eceeec-CeEEEEEEEEeecCcEEEEEEc
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL-GPITEG-DWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~-~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
.+ .+++++ +++....+| .|.++++.+++. ..+... ...+... .|+|++++|+..+.
T Consensus 154 -----~~----~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 154 -----AV----HFNRDGSLIVSSSYDG--LCRIWDTASGQCLKTLIDDDNPPVSFV-KFSPNGKYILAATL 212 (312)
T ss_dssp -----EE----EECTTSSEEEEEETTS--CEEEEETTTCCEEEEECCSSCCCEEEE-EECTTSSEEEEEET
T ss_pred -----EE----EEcCCCCEEEEEeCCC--cEEEEECCCCceeeEEeccCCCceEEE-EECCCCCEEEEEcC
Confidence 00 233444 555555555 466667655442 333222 2233333 59999998776654
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.26 E-value=1.4e-05 Score=79.12 Aligned_cols=208 Identities=6% Similarity=-0.035 Sum_probs=104.1
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
....+.|||||++||....+ + .|.+||+.++....+..
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d-~-----------------------------------~i~iw~~~~~~~~~~~~------ 50 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTAT-N-----------------------------------QVELYEQDGNGWKHART------ 50 (377)
T ss_dssp CCSCCEECSSSSEEECCCSS-S-----------------------------------CBCEEEEETTEEEECCC------
T ss_pred cEEEEEECCCCCEEEEecCC-C-----------------------------------EEEEEEccCCceEEEEE------
Confidence 45678999999988764221 1 24678888764222221
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc-eEEEEEee-cCCeeeccCCcccCCCCCccCCCe-EEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ-RKVILVEE-LDSWVNLHDCFTPLDKGVTKYSGG-FIW 180 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~-~~~l~~~~-~~~w~~~~~~~~~~~~~~~~~~d~-~~~ 180 (571)
+......+..+.|+|||++++....... |.+.|+.+++ .+.+.... ....+. .+ .+++++ +++
T Consensus 51 ~~~h~~~v~~~~~s~~~~~l~s~s~d~~----v~vwd~~~~~~~~~~~~~~~~~~~v~------~~----~~~~~~~~l~ 116 (377)
T 3dwl_C 51 FSDHDKIVTCVDWAPKSNRIVTCSQDRN----AYVYEKRPDGTWKQTLVLLRLNRAAT------FV----RWSPNEDKFA 116 (377)
T ss_dssp BCCCSSCEEEEEECTTTCCEEEEETTSS----EEEC------CCCCEEECCCCSSCEE------EE----ECCTTSSCCE
T ss_pred EecCCceEEEEEEeCCCCEEEEEeCCCe----EEEEEcCCCCceeeeeEecccCCceE------EE----EECCCCCEEE
Confidence 1334567888999999997777654332 7777888776 22121111 111110 00 234443 444
Q ss_pred EEecCCccEEEEEeCCCce----eeceee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCC-CCC-------
Q 008274 181 ASEKTGFRHLYLHDINGTC----LGPITE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYP-DWN------- 247 (571)
Q Consensus 181 ~s~~~g~~~l~~~~~~~~~----~~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~-~g~------- 247 (571)
....+|. |.++++.+++ .+.+.. ....+..+ .|+|+++.|+..+.... ..+|.+.... ...
T Consensus 117 ~~~~d~~--i~iwd~~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~l~~~~~d~~---i~iwd~~~~~~~~~~~~~~~~ 190 (377)
T 3dwl_C 117 VGSGARV--ISVCYFEQENDWWVSKHLKRPLRSTILSL-DWHPNNVLLAAGCADRK---AYVLSAYVRDVDAKPEASVWG 190 (377)
T ss_dssp EEESSSC--EEECCC-----CCCCEEECSSCCSCEEEE-EECTTSSEEEEEESSSC---EEEEEECCSSCC-CCCSCSSC
T ss_pred EEecCCe--EEEEEECCcccceeeeEeecccCCCeEEE-EEcCCCCEEEEEeCCCE---EEEEEEEecccCCCccccccc
Confidence 4444553 5555655554 344544 34345555 49999987776665432 5666553200 000
Q ss_pred C--CCC-CCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 248 H--TLE-APVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 248 ~--~~~-~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
. +.. ....+........+.++|+|++++..... ..+.+.++.+++.
T Consensus 191 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 191 SRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHD----SSVTIAYPSAPEQ 239 (377)
T ss_dssp SCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETT----TEEC-CEECSTTS
T ss_pred cccchhhhhhcccCCceEEEEEECCCCCEEEEEeCC----CcEEEEECCCCCC
Confidence 0 000 00111122234566899999977665322 3677777765553
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=98.25 E-value=6.5e-05 Score=79.03 Aligned_cols=157 Identities=11% Similarity=0.062 Sum_probs=90.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|.+||..+.....+. .....+..+.|+||++.++...... .|.+.|..+...+.+..+... +.
T Consensus 408 ~v~~~~~~~~~~~~~~---------~~~~~v~~~~~s~d~~~l~~~~~d~----~v~~w~~~~~~~~~~~~~~~~--v~- 471 (577)
T 2ymu_A 408 TVKLWNRNGQLLQTLT---------GHSSSVWGVAFSPDDQTIASASDDK----TVKLWNRNGQLLQTLTGHSSS--VR- 471 (577)
T ss_dssp EEEEECTTCCEEEEEE---------CCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTSCEEEEEECCSSC--EE-
T ss_pred EEEEEeCCCCEEEEec---------CCCCCeEEEEECCCCCEEEEEcCCC----EEEEEECCCCEEEEEcCCCCC--EE-
Confidence 3567776554333332 2345677899999999877765433 367778755444444322211 10
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
.+ .+++|+ ++.....++ .|.+++.++...+.+......+..+. |+|||++|+..+ .++ ...||
T Consensus 472 -----~~----~~spd~~~las~~~d~--~i~iw~~~~~~~~~~~~h~~~v~~l~-~s~dg~~l~s~~-~dg--~v~lw- 535 (577)
T 2ymu_A 472 -----GV----AFSPDGQTIASASDDK--TVKLWNRNGQLLQTLTGHSSSVRGVA-FSPDGQTIASAS-DDK--TVKLW- 535 (577)
T ss_dssp -----EE----EECTTSCEEEEEETTS--EEEEEETTSCEEEEEECCSSCEEEEE-ECTTSSCEEEEE-TTS--EEEEE-
T ss_pred -----EE----EEcCCCCEEEEEeCCC--EEEEEcCCCCEEEEEeCCCCCEEEEE-EcCCCCEEEEEE-CcC--EEEEE-
Confidence 00 234554 555555555 46666777776777766555566664 999999776554 333 24444
Q ss_pred EEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEE
Q 008274 240 AKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVD 276 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~ 276 (571)
+. ++. ....+.. ......+.|+|||++++-
T Consensus 536 -d~--~~~----~~~~~~~h~~~v~~~~fs~dg~~l~s 566 (577)
T 2ymu_A 536 -NR--NGQ----LLQTLTGHSSSVWGVAFSPDGQTIAS 566 (577)
T ss_dssp -CT--TSC----EEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred -eC--CCC----EEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 44 342 3333432 233456689999998764
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=98.25 E-value=0.00029 Score=69.47 Aligned_cols=171 Identities=15% Similarity=0.101 Sum_probs=95.4
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~ 185 (571)
.+.+...++|||||++++..+... ...|.+.|+++++.....+.... +. . ..+++|+ ++.....+
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~--d~~i~iwd~~~~~~~~~~~~~~~--V~------~----v~fspdg~~l~s~s~~ 197 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKV--PAIMRIIDPSDLTEKFEIETRGE--VK------D----LHFSTDGKVVAYITGS 197 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCS--SCEEEEEETTTTEEEEEEECSSC--CC------E----EEECTTSSEEEEECSS
T ss_pred cccCEEEEEEcCCCCEEEEEECCC--CCEEEEeECCCCcEEEEeCCCCc--eE------E----EEEccCCceEEeccce
Confidence 345677789999999887765432 22478889999987654432221 11 0 1345665 44443332
Q ss_pred CccEEEEEeCCCc-eeeceee--cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC-CCc
Q 008274 186 GFRHLYLHDINGT-CLGPITE--GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-GKG 261 (571)
Q Consensus 186 g~~~l~~~~~~~~-~~~~lT~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-~~g 261 (571)
.+.+++...+ .....+. ....+..+ .|+|||+.++..+...+. ...++.+++.. +.........+.. ...
T Consensus 198 ---~~~~~~~~~~~~~~~~~~~~~~~~v~~v-~fspdg~~l~~~s~d~~~-~~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 271 (365)
T 4h5i_A 198 ---SLEVISTVTGSCIARKTDFDKNWSLSKI-NFIADDTVLIAASLKKGK-GIVLTKISIKS-GNTSVLRSKQVTNRFKG 271 (365)
T ss_dssp ---CEEEEETTTCCEEEEECCCCTTEEEEEE-EEEETTEEEEEEEESSSC-CEEEEEEEEET-TEEEEEEEEEEESSCSC
T ss_pred ---eEEEEEeccCcceeeeecCCCCCCEEEE-EEcCCCCEEEEEecCCcc-eeEEeeccccc-ceecceeeeeecCCCCC
Confidence 2445554333 3322222 34456655 499999988877765432 24455555521 1100001122332 233
Q ss_pred eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 262 KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 262 ~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
...+.|||||++++..... ..+.+.++.+++.++.+
T Consensus 272 V~~~~~Spdg~~lasgs~D----~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASND----NSIALVKLKDLSMSKIF 307 (365)
T ss_dssp EEEEEECTTSCEEEEEETT----SCEEEEETTTTEEEEEE
T ss_pred eEeEEECCCCCceEEEcCC----CEEEEEECCCCcEEEEe
Confidence 5566899999987654433 25888898887766554
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=98.24 E-value=0.00014 Score=76.53 Aligned_cols=173 Identities=11% Similarity=0.085 Sum_probs=96.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.+||..+.....+. .....+..+.|+|||+.++...... .|.+.|..+...+.+..+...-+.
T Consensus 367 ~v~~~~~~~~~~~~~~---------~~~~~v~~~~~s~dg~~l~~~~~d~----~v~~~~~~~~~~~~~~~~~~~v~~-- 431 (577)
T 2ymu_A 367 TVKLWNRNGQLLQTLT---------GHSSSVRGVAFSPDGQTIASASDDK----TVKLWNRNGQLLQTLTGHSSSVWG-- 431 (577)
T ss_dssp EEEEEETTCCEEEEEE---------CCSSCEEEEEECTTSSCEEEEETTS----EEEEECTTCCEEEEEECCSSCEEE--
T ss_pred EEEEEcCCCCEEEEec---------CCCCCeEEEEECCCCCEEEEEeCCC----EEEEEeCCCCEEEEecCCCCCeEE--
Confidence 3567786554444332 2345677899999999877654332 367777654333333322221110
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
+ .+++|+ ++.....++ .|.+++.++.....+......+..+. |+||++.|+..+. ++ ...+|
T Consensus 432 ------~----~~s~d~~~l~~~~~d~--~v~~w~~~~~~~~~~~~~~~~v~~~~-~spd~~~las~~~-d~--~i~iw- 494 (577)
T 2ymu_A 432 ------V----AFSPDDQTIASASDDK--TVKLWNRNGQLLQTLTGHSSSVRGVA-FSPDGQTIASASD-DK--TVKLW- 494 (577)
T ss_dssp ------E----EECTTSSEEEEEETTS--EEEEEETTSCEEEEEECCSSCEEEEE-ECTTSCEEEEEET-TS--EEEEE-
T ss_pred ------E----EECCCCCEEEEEcCCC--EEEEEECCCCEEEEEcCCCCCEEEEE-EcCCCCEEEEEeC-CC--EEEEE-
Confidence 0 223443 555555555 46666777776677766555566654 9999998776553 32 23444
Q ss_pred EEeCCCCCCCCCCCeEecCC-CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 240 AKLYPDWNHTLEAPVKLTNG-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~~-~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
+. ++. ....+... .....+.|||||++++... .. ..+.+.+. +++.
T Consensus 495 -~~--~~~----~~~~~~~h~~~v~~l~~s~dg~~l~s~~-~d---g~v~lwd~-~~~~ 541 (577)
T 2ymu_A 495 -NR--NGQ----LLQTLTGHSSSVRGVAFSPDGQTIASAS-DD---KTVKLWNR-NGQL 541 (577)
T ss_dssp -ET--TSC----EEEEEECCSSCEEEEEECTTSSCEEEEE-TT---SEEEEECT-TSCE
T ss_pred -cC--CCC----EEEEEeCCCCCEEEEEEcCCCCEEEEEE-Cc---CEEEEEeC-CCCE
Confidence 45 443 33344432 2345668999999876433 22 25666664 4443
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=98.24 E-value=4.5e-05 Score=76.30 Aligned_cols=169 Identities=11% Similarity=0.005 Sum_probs=91.6
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
|.+||+.+++....-.. ......+..+.|+|||+.++...... .|.++|+.+++............
T Consensus 156 i~iwd~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~---- 221 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGP------DVHPDTIYSVDWSRDGALICTSCRDK----RVRVIEPRKGTVVAEKDRPHEGT---- 221 (402)
T ss_dssp EEEEETTTTEEEEEECT------TTCCSCEEEEEECTTSSCEEEEETTS----EEEEEETTTTEEEEEEECSSCSS----
T ss_pred EEEEECCCCCccEEEec------CCCCCceEEEEECCCCCEEEEEecCC----cEEEEeCCCCceeeeeccCCCCC----
Confidence 68899998875433200 12455788899999999777765433 48999999987654331111100
Q ss_pred CCcccCCCCCccCCCe-EEEEE-ecCCccEEEEEeCCCcee--ecee-ecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 162 DCFTPLDKGVTKYSGG-FIWAS-EKTGFRHLYLHDINGTCL--GPIT-EGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 162 ~~~~~~~~~~~~~~d~-~~~~s-~~~g~~~l~~~~~~~~~~--~~lT-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
.... ..+++++ +++.. .+..-..|.++++.+.+. .... .....+..+ .|+++++.|++++..++. ..
T Consensus 222 -~~~~----~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~~~g~~dg~--i~ 293 (402)
T 2aq5_A 222 -RPVH----AVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLP-FFDPDTNIVYLCGKGDSS--IR 293 (402)
T ss_dssp -SCCE----EEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEE-EEETTTTEEEEEETTCSC--EE
T ss_pred -cceE----EEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEE-EEcCCCCEEEEEEcCCCe--EE
Confidence 0000 1244555 44443 223345788888765432 1111 112223444 499999999988876653 55
Q ss_pred EEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEE
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFV 275 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v 275 (571)
+|.+.- +..................+.++|++..++
T Consensus 294 i~d~~~---~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 294 YFEITS---EAPFLHYLSMFSSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp EEEECS---STTCEEEEEEECCSSCCSEEEECCGGGSCG
T ss_pred EEEecC---CCcceEeecccccCCcccceEEecccccce
Confidence 555432 210000111222223344568999987653
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=98.24 E-value=0.00029 Score=70.84 Aligned_cols=188 Identities=12% Similarity=0.108 Sum_probs=102.1
Q ss_pred EEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|++||+++|+...+ .. ......+..++|+|||++++...... .|.+.|+++++..............
T Consensus 126 tV~lWd~~tg~~~~~~~~-------~~~~~~V~sv~fspdg~~lasgs~Dg----~v~iWd~~~~~~~~~~~~h~~~v~~ 194 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQM-------EQPGEYISSVAWIKEGNYLAVGTSSA----EVQLWDVQQQKRLRNMTSHSARVGS 194 (420)
T ss_dssp EEEEEETTTCCEEEEEEC-------CSTTCCEEEEEECTTSSEEEEEETTS----CEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EEEEEECCCCCEEEEEEe-------cCCCCcEEEEEECCCCCEEEEEECCC----eEEEEEcCCCcEEEEEeCCCCceEE
Confidence 579999999987654 33 23456789999999999887765444 3888899998754332211111100
Q ss_pred ccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCC--ceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDING--TCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~--~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
+ .+++ .++.....++. ++..+... .....+......+... .++++|+.++..+.... ..+
T Consensus 195 ----~-------s~~~-~~l~sgs~d~~--i~~~d~~~~~~~~~~~~~h~~~~~~~-~~~~~g~~l~s~~~D~~---v~i 256 (420)
T 4gga_A 195 ----L-------SWNS-YILSSGSRSGH--IHHHDVRVAEHHVATLSGHSQEVCGL-RWAPDGRHLASGGNDNL---VNV 256 (420)
T ss_dssp ----E-------EEET-TEEEEEETTSE--EEEEETTSSSCEEEEEECCSSCEEEE-EECTTSSEEEEEETTSC---EEE
T ss_pred ----E-------eeCC-CEEEEEeCCCc--eeEeeecccceeeEEecccccceeee-eecCCCCeeeeeecccc---ceE
Confidence 0 1222 24444444443 44444332 2333344333344444 48999988776665433 444
Q ss_pred EEEEeCCCCCCCCCCCeEecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
+ +.. .+.............. ......++|++..++.+.+.. .-..|.+.++.+++....+
T Consensus 257 ~--~~~-~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs-~D~~I~iwd~~t~~~~~~~ 317 (420)
T 4gga_A 257 W--PSA-PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT-SDRHIRIWNVCSGACLSAV 317 (420)
T ss_dssp E--ESS-CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECT-TTCEEEEEETTTTEEEEEE
T ss_pred E--eec-cccccceeeeeecccCCceeeeeeCCCcccEEEEEeec-CCCEEEEEeCCccccceee
Confidence 4 331 1211101122222222 344558899877666655432 2236788888777655444
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.23 E-value=0.00014 Score=71.00 Aligned_cols=187 Identities=10% Similarity=0.037 Sum_probs=100.1
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEE-eccCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWM-DLQCGGTDQ 104 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~-~~~~~~~~~ 104 (571)
..+.|||||+.||-...+ + .+.+||+++++.... .+.
T Consensus 20 ~~l~~sp~g~~las~~~D-~-----------------------------------~i~iw~~~~~~~~~~~~~~------ 57 (345)
T 3fm0_A 20 WFLAWNPAGTLLASCGGD-R-----------------------------------RIRIWGTEGDSWICKSVLS------ 57 (345)
T ss_dssp EEEEECTTSSCEEEEETT-S-----------------------------------CEEEEEEETTEEEEEEEEC------
T ss_pred EEEEECCCCCEEEEEcCC-C-----------------------------------eEEEEEcCCCcceeeeeec------
Confidence 468899999999865432 1 257788887753221 111
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-CeeeccCCcccCCCCCccCCCe-EEEEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVNLHDCFTPLDKGVTKYSGG-FIWAS 182 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~~~~~~~~~~~~~~~~~d~-~~~~s 182 (571)
......+..++|+|||++++....... |.+.|..+++.+.+...... ..+. .+ .|++++ +++..
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~----v~iw~~~~~~~~~~~~~~~h~~~v~------~v----~~sp~~~~l~s~ 123 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDAT----TCIWKKNQDDFECVTTLEGHENEVK------SV----AWAPSGNLLATC 123 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSC----EEEEEECCC-EEEEEEECCCSSCEE------EE----EECTTSSEEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCc----EEEEEccCCCeEEEEEccCCCCCce------EE----EEeCCCCEEEEE
Confidence 224557888999999998877654432 55556666654433322111 1111 01 234554 66666
Q ss_pred ecCCccEEEEEeCCCc-e-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC-C
Q 008274 183 EKTGFRHLYLHDINGT-C-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-G 259 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~-~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-~ 259 (571)
..+|.-.||-++.... + ...+......+..+ .|+|+++.|+..+.. + ...+|...- ... .....+.. .
T Consensus 124 s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~-~~~p~~~~l~s~s~d-~--~i~~w~~~~--~~~---~~~~~~~~h~ 194 (345)
T 3fm0_A 124 SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV-VWHPSQELLASASYD-D--TVKLYREEE--DDW---VCCATLEGHE 194 (345)
T ss_dssp ETTSCEEEEEECTTSCEEEEEEECCCCSCEEEE-EECSSSSCEEEEETT-S--CEEEEEEET--TEE---EEEEEECCCS
T ss_pred ECCCeEEEEECCCCCCeEEEEEecCcCCCeEEE-EECCCCCEEEEEeCC-C--cEEEEEecC--CCE---EEEEEecCCC
Confidence 6666555554432211 1 22333333345555 499999876655543 3 266665542 110 00112222 2
Q ss_pred CceEEEEECCCCCEEEEE
Q 008274 260 KGKHVAVLDHNMRNFVDF 277 (571)
Q Consensus 260 ~g~~~~~~s~~g~~~v~~ 277 (571)
.....+.|+|+|++++..
T Consensus 195 ~~v~~l~~sp~g~~l~s~ 212 (345)
T 3fm0_A 195 STVWSLAFDPSGQRLASC 212 (345)
T ss_dssp SCEEEEEECTTSSEEEEE
T ss_pred CceEEEEECCCCCEEEEE
Confidence 234566899999877643
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.23 E-value=8.2e-05 Score=75.71 Aligned_cols=193 Identities=10% Similarity=0.038 Sum_probs=107.2
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECC--CCceEEE-eccCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAA--GGPVSWM-DLQCGG 101 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~--~~~~~~~-~~~~~~ 101 (571)
...+.|||||++|+++...++ .+.+||+. +++.... ..
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg-----------------------------------~v~iwd~~~~~~~~~~~~~~---- 145 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDK-----------------------------------SLLVFDVDKTSKNVLKLRKR---- 145 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGT-----------------------------------EEEEEEECSSSSSCEEEEEE----
T ss_pred eEEEEEcCCCCEEEEEECCCC-----------------------------------eEEEEECcCCCCceeeeeec----
Confidence 457889999999866543322 35778877 6554332 21
Q ss_pred CCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-----EEEeecCCeeeccCCcccCCCCCccCCC
Q 008274 102 TDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-----ILVEELDSWVNLHDCFTPLDKGVTKYSG 176 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-----l~~~~~~~w~~~~~~~~~~~~~~~~~~d 176 (571)
......+..+.|+|||+.++...... .|+.+++.+++... +..+... +. .+ .++++
T Consensus 146 ---~~~~~~v~~~~~sp~~~~l~~~~~~g----~v~~~~~~~~~~~~~~~~~~~~h~~~--v~------~~----~~sp~ 206 (450)
T 2vdu_B 146 ---FCFSKRPNAISIAEDDTTVIIADKFG----DVYSIDINSIPEEKFTQEPILGHVSM--LT------DV----HLIKD 206 (450)
T ss_dssp ---EECSSCEEEEEECTTSSEEEEEETTS----EEEEEETTSCCCSSCCCCCSEECSSC--EE------EE----EEEEC
T ss_pred ---ccCCCCceEEEEcCCCCEEEEEeCCC----cEEEEecCCcccccccceeeecccCc--eE------EE----EEcCC
Confidence 01345677899999999887765422 48999998876431 2211111 10 00 23444
Q ss_pred ---e-EEEEEecCCccEEEEEeCCCce-eec-eeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCC
Q 008274 177 ---G-FIWASEKTGFRHLYLHDINGTC-LGP-ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTL 250 (571)
Q Consensus 177 ---~-~~~~s~~~g~~~l~~~~~~~~~-~~~-lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~ 250 (571)
+ +++....++. |+++++.+++ ... +......+..+. |+ ++++|+..+. + ..|..+++. .+.
T Consensus 207 ~~~~~~l~s~~~d~~--i~vwd~~~~~~~~~~~~~h~~~v~~~~-~s-d~~~l~s~~~-d----~~v~vwd~~-~~~--- 273 (450)
T 2vdu_B 207 SDGHQFIITSDRDEH--IKISHYPQCFIVDKWLFGHKHFVSSIC-CG-KDYLLLSAGG-D----DKIFAWDWK-TGK--- 273 (450)
T ss_dssp TTSCEEEEEEETTSC--EEEEEESCTTCEEEECCCCSSCEEEEE-EC-STTEEEEEES-S----SEEEEEETT-TCC---
T ss_pred CCCCcEEEEEcCCCc--EEEEECCCCceeeeeecCCCCceEEEE-EC-CCCEEEEEeC-C----CeEEEEECC-CCc---
Confidence 4 6666666654 5555554443 223 333333455554 88 8888776653 2 234444552 221
Q ss_pred CCCeEecC--------------------------CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 251 EAPVKLTN--------------------------GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 251 ~~~~~lt~--------------------------~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
....+.. ......+.++|++++++...... ..+.++++
T Consensus 274 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d---~~i~iw~~ 337 (450)
T 2vdu_B 274 -NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT---KCIIILEM 337 (450)
T ss_dssp -EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC---SEEEEEEE
T ss_pred -EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC---CeEEEEEe
Confidence 1112210 11234558899999877665232 36777777
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=98.22 E-value=0.00033 Score=68.17 Aligned_cols=179 Identities=12% Similarity=0.051 Sum_probs=96.1
Q ss_pred EEEEEECCCCce--EEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCe
Q 008274 81 RLGVVSAAGGPV--SWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW 157 (571)
Q Consensus 81 ~l~~~dl~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w 157 (571)
.+.+||+.+++. +.. .+ ......+....|++|++ ++...... .|.+.|+.+++.......... .
T Consensus 120 ~v~iw~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~-l~s~s~d~----~i~~wd~~~~~~~~~~~~h~~-~ 186 (340)
T 1got_B 120 ICSIYNLKTREGNVRVSREL-------AGHTGYLSCCRFLDDNQ-IVTSSGDT----TCALWDIETGQQTTTFTGHTG-D 186 (340)
T ss_dssp EEEEEETTTCSBSCEEEEEE-------ECCSSCEEEEEEEETTE-EEEEETTS----CEEEEETTTTEEEEEECCCSS-C
T ss_pred eEEEEECccCCCcceeEEEe-------cCCCccEEEEEECCCCc-EEEEECCC----cEEEEECCCCcEEEEEcCCCC-c
Confidence 457788876531 111 11 23455777889999997 34333322 388889999876543221111 1
Q ss_pred eeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 158 VNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
+. .+ .+++++ +++....+|. |.++++..++ ...+......+..+ .|+|+++.|+..+. ++. .
T Consensus 187 v~------~~----~~~~~~~~l~sg~~d~~--v~~wd~~~~~~~~~~~~h~~~v~~v-~~~p~~~~l~s~s~-d~~--v 250 (340)
T 1got_B 187 VM------SL----SLAPDTRLFVSGACDAS--AKLWDVREGMCRQTFTGHESDINAI-CFFPNGNAFATGSD-DAT--C 250 (340)
T ss_dssp EE------EE----EECTTSSEEEEEETTSC--EEEEETTTCSEEEEECCCSSCEEEE-EECTTSSEEEEEET-TSC--E
T ss_pred eE------EE----EECCCCCEEEEEeCCCc--EEEEECCCCeeEEEEcCCcCCEEEE-EEcCCCCEEEEEcC-CCc--E
Confidence 11 00 234444 5555555554 5556665544 33444444445555 49999987765553 332 4
Q ss_pred EEEEEEeCCCCCCCCCCCeEecCC---CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeE
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTNG---KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVL 299 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~~---~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~ 299 (571)
.+| ++. .+. ....+... .+...+.|+|+|++++..... ..+.+.+..+++...
T Consensus 251 ~iw--d~~-~~~----~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d----~~i~vwd~~~~~~~~ 306 (340)
T 1got_B 251 RLF--DLR-ADQ----ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD----FNCNVWDALKADRAG 306 (340)
T ss_dssp EEE--ETT-TTE----EEEEECCTTCCSCEEEEEECTTSSEEEEEETT----SEEEEEETTTCCEEE
T ss_pred EEE--ECC-CCc----EEEEEccCCcccceEEEEECCCCCEEEEECCC----CeEEEEEcccCcEee
Confidence 444 441 111 12222222 235567999999987664433 368888876655443
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.21 E-value=0.00024 Score=69.34 Aligned_cols=156 Identities=12% Similarity=0.109 Sum_probs=86.8
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||++||-...+ + .+.+||+.+++...+..-
T Consensus 64 v~~~~~sp~g~~l~s~s~D-~-----------------------------------~v~iw~~~~~~~~~~~~~------ 101 (345)
T 3fm0_A 64 VRKVAWSPCGNYLASASFD-A-----------------------------------TTCIWKKNQDDFECVTTL------ 101 (345)
T ss_dssp EEEEEECTTSSEEEEEETT-S-----------------------------------CEEEEEECCC-EEEEEEE------
T ss_pred EEEEEECCCCCEEEEEECC-C-----------------------------------cEEEEEccCCCeEEEEEc------
Confidence 4668899999988765432 1 246677776654332211
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeec-CCeeeccCCcccCCCCCccCCCe-EEEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEEL-DSWVNLHDCFTPLDKGVTKYSGG-FIWA 181 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~-~~w~~~~~~~~~~~~~~~~~~d~-~~~~ 181 (571)
......+..+.|+|||++++....... |.+.|+.+++... +..... ...+. . ..|++++ +++.
T Consensus 102 ~~h~~~v~~v~~sp~~~~l~s~s~D~~----v~iwd~~~~~~~~~~~~~~~h~~~v~------~----~~~~p~~~~l~s 167 (345)
T 3fm0_A 102 EGHENEVKSVAWAPSGNLLATCSRDKS----VWVWEVDEEDEYECVSVLNSHTQDVK------H----VVWHPSQELLAS 167 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSC----EEEEEECTTSCEEEEEEECCCCSCEE------E----EEECSSSSCEEE
T ss_pred cCCCCCceEEEEeCCCCEEEEEECCCe----EEEEECCCCCCeEEEEEecCcCCCeE------E----EEECCCCCEEEE
Confidence 234567888999999998877654432 6777777654322 222111 11110 0 0234444 5555
Q ss_pred EecCCccEEEEEeCCCcee---eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 182 SEKTGFRHLYLHDINGTCL---GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 182 s~~~g~~~l~~~~~~~~~~---~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
...+|.-.||-.. .++. ..+......+..+. |+|+|++|+..+. ++ ...+|....
T Consensus 168 ~s~d~~i~~w~~~--~~~~~~~~~~~~h~~~v~~l~-~sp~g~~l~s~s~-D~--~v~iW~~~~ 225 (345)
T 3fm0_A 168 ASYDDTVKLYREE--EDDWVCCATLEGHESTVWSLA-FDPSGQRLASCSD-DR--TVRIWRQYL 225 (345)
T ss_dssp EETTSCEEEEEEE--TTEEEEEEEECCCSSCEEEEE-ECTTSSEEEEEET-TS--CEEEEEEEC
T ss_pred EeCCCcEEEEEec--CCCEEEEEEecCCCCceEEEE-ECCCCCEEEEEeC-CC--eEEEecccc
Confidence 5566655555443 3322 23333333455554 9999987765554 43 277777654
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=98.21 E-value=0.00096 Score=64.95 Aligned_cols=187 Identities=10% Similarity=0.047 Sum_probs=94.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEe-ecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVE-ELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~-~~~~w~~ 159 (571)
.+.+||+.+++.... + ......+..+.|+|||+.++...... .|.+.|+.+.....+... ....++.
T Consensus 99 ~v~lwd~~~~~~~~~-~-------~~h~~~v~~v~~sp~~~~l~s~~~d~----~i~~wd~~~~~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKR-F-------VGHQSEVYSVAFSPDNRQILSAGAER----EIKLWNILGECKFSSAEKENHSDWVS 166 (343)
T ss_dssp EEEEEETTSSCEEEE-E-------ECCCSCEEEEEECSSTTEEEEEETTS----CEEEEESSSCEEEECCTTTSCSSCEE
T ss_pred cEEEEECCCCcEEEE-E-------cCCCCcEEEEEECCCCCEEEEEcCCC----EEEEEeccCCceeeeecccCCCceee
Confidence 468899998875432 2 22455788899999999877665333 266677764322211100 0111211
Q ss_pred ccCCcccCCCCC-ccCCC-eEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGV-TKYSG-GFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~-~~~~d-~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
. -.|.+..... ...+. .+++....+|. |.+++........+......+..+ .|+|+|++|+..+. ++ ...+
T Consensus 167 ~-~~~~~~~~~~~~~~~~~~~l~s~~~d~~--i~iwd~~~~~~~~~~~h~~~v~~~-~~s~~g~~l~sgs~-dg--~v~i 239 (343)
T 2xzm_R 167 C-VRYSPIMKSANKVQPFAPYFASVGWDGR--LKVWNTNFQIRYTFKAHESNVNHL-SISPNGKYIATGGK-DK--KLLI 239 (343)
T ss_dssp E-EEECCCCCSCSCCCSSCCEEEEEETTSE--EEEEETTTEEEEEEECCSSCEEEE-EECTTSSEEEEEET-TC--EEEE
T ss_pred e-eeeccccccccccCCCCCEEEEEcCCCE--EEEEcCCCceeEEEcCccccceEE-EECCCCCEEEEEcC-CC--eEEE
Confidence 1 1122211000 01111 24554445553 555565444333444334345555 49999997765543 33 2444
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
| ++...+. ....+........+.|+|++.+++.. +. ..+.+.++.+++.
T Consensus 240 w--d~~~~~~----~~~~~~~~~~v~~v~~sp~~~~la~~-~d----~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 240 W--DILNLTY----PQREFDAGSTINQIAFNPKLQWVAVG-TD----QGVKIFNLMTQSK 288 (343)
T ss_dssp E--ESSCCSS----CSEEEECSSCEEEEEECSSSCEEEEE-ES----SCEEEEESSSCCS
T ss_pred E--ECCCCcc----cceeecCCCcEEEEEECCCCCEEEEE-CC----CCEEEEEeCCCCC
Confidence 4 5421221 22333333345567999999876533 22 1477777755543
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=98.20 E-value=5.3e-05 Score=73.79 Aligned_cols=127 Identities=13% Similarity=-0.002 Sum_probs=67.5
Q ss_pred EEEEEECCCCceEE-EeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCC-ee
Q 008274 81 RLGVVSAAGGPVSW-MDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS-WV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~-w~ 158 (571)
.|+++|+++++... +... .......+.|+|||+.+++..... ..|+++|+++++........... -.
T Consensus 22 ~v~~~d~~~~~~~~~~~~~--------~~~~~~~~~~s~dg~~~~v~~~~~---~~i~~~d~~t~~~~~~~~~~~~~~~~ 90 (349)
T 1jmx_B 22 NLHVVDVASDTVYKSCVMP--------DKFGPGTAMMAPDNRTAYVLNNHY---GDIYGIDLDTCKNTFHANLSSVPGEV 90 (349)
T ss_dssp EEEEEETTTTEEEEEEECS--------SCCSSCEEEECTTSSEEEEEETTT---TEEEEEETTTTEEEEEEESCCSTTEE
T ss_pred eEEEEECCCCcEEEEEecC--------CCCCCceeEECCCCCEEEEEeCCC---CcEEEEeCCCCcEEEEEEcccccccc
Confidence 57899999887653 3221 111345689999998666654332 25999999999765433321100 00
Q ss_pred eccCCcccCCCCCccCCCe-EEEEEecC----------CccEEEEEeCCCceeec-ee--ecCeEEEEEEEEeecCcEEE
Q 008274 159 NLHDCFTPLDKGVTKYSGG-FIWASEKT----------GFRHLYLHDINGTCLGP-IT--EGDWMVEQIVGVNEASGQVY 224 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~-~~~~s~~~----------g~~~l~~~~~~~~~~~~-lT--~~~~~~~~~~~~s~dg~~l~ 224 (571)
.. ......+++|+ .++.+..+ ....|+++++.+++... +. .....+..+ .|++||+ +|
T Consensus 91 ~~------~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~s~dg~-l~ 162 (349)
T 1jmx_B 91 GR------SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLM-RAADDGS-LY 162 (349)
T ss_dssp EE------CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCE-EECTTSC-EE
T ss_pred cc------cccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccce-eECCCCc-EE
Confidence 00 00111345554 44443321 12579999987643221 11 111122233 3899999 77
Q ss_pred EE
Q 008274 225 FT 226 (571)
Q Consensus 225 ~~ 226 (571)
+.
T Consensus 163 ~~ 164 (349)
T 1jmx_B 163 VA 164 (349)
T ss_dssp EE
T ss_pred Ec
Confidence 64
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=98.19 E-value=0.00056 Score=65.89 Aligned_cols=181 Identities=13% Similarity=0.091 Sum_probs=97.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.+||+.+++.... + ......+..+.|+||++.++....... |.+.|+.+.....+..+. .++..
T Consensus 88 ~v~~wd~~~~~~~~~-~-------~~h~~~v~~~~~~~~~~~l~s~s~D~~----i~vwd~~~~~~~~~~~h~--~~v~~ 153 (319)
T 3frx_A 88 TLRLWDVATGETYQR-F-------VGHKSDVMSVDIDKKASMIISGSRDKT----IKVWTIKGQCLATLLGHN--DWVSQ 153 (319)
T ss_dssp EEEEEETTTTEEEEE-E-------ECCSSCEEEEEECTTSCEEEEEETTSC----EEEEETTSCEEEEECCCS--SCEEE
T ss_pred EEEEEECCCCCeeEE-E-------ccCCCcEEEEEEcCCCCEEEEEeCCCe----EEEEECCCCeEEEEeccC--CcEEE
Confidence 478899998875432 2 234567888999999997776654332 666677765443332211 22211
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
-.+.+... ...++ .++....+|. |.++++...+. ..+......+..+ .|+|+|+.|+..+. ++ .|.
T Consensus 154 -~~~~~~~~---~~~~~~~l~s~~~d~~--i~~wd~~~~~~~~~~~~h~~~v~~~-~~sp~g~~l~s~~~-dg----~i~ 221 (319)
T 3frx_A 154 -VRVVPNEK---ADDDSVTIISAGNDKM--VKAWNLNQFQIEADFIGHNSNINTL-TASPDGTLIASAGK-DG----EIM 221 (319)
T ss_dssp -EEECCC---------CCEEEEEETTSC--EEEEETTTTEEEEEECCCCSCEEEE-EECTTSSEEEEEET-TC----EEE
T ss_pred -EEEccCCC---CCCCccEEEEEeCCCE--EEEEECCcchhheeecCCCCcEEEE-EEcCCCCEEEEEeC-CC----eEE
Confidence 11222110 11233 4444445553 55566655543 3333334445555 49999987765543 33 344
Q ss_pred EEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 239 CAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
..++. .+. ....+........+.|+|++.+++..... .+.++++..+..
T Consensus 222 iwd~~-~~~----~~~~~~~~~~v~~~~~sp~~~~la~~~~~-----~i~v~~~~~~~~ 270 (319)
T 3frx_A 222 LWNLA-AKK----AMYTLSAQDEVFSLAFSPNRYWLAAATAT-----GIKVFSLDPQYL 270 (319)
T ss_dssp EEETT-TTE----EEEEEECCSCEEEEEECSSSSEEEEEETT-----EEEEEEETTEEE
T ss_pred EEECC-CCc----EEEEecCCCcEEEEEEcCCCCEEEEEcCC-----CcEEEEeCcCee
Confidence 44552 121 23344444445667999999887765432 466667654443
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=98.17 E-value=6.4e-05 Score=75.52 Aligned_cols=188 Identities=12% Similarity=0.044 Sum_probs=97.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeec--C---
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEEL--D--- 155 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~--~--- 155 (571)
.+.+||+.+++.... + ......+..+.|+|||+.++...... .|.+.|+.+++......... .
T Consensus 162 ~i~iwd~~~~~~~~~-~-------~~h~~~v~~~~~~~~~~~l~s~~~d~----~v~iwd~~~~~~~~~~~~~~~~~~~v 229 (420)
T 3vl1_A 162 QLKIWSVKDGSNPRT-L-------IGHRATVTDIAIIDRGRNVLSASLDG----TIRLWECGTGTTIHTFNRKENPHDGV 229 (420)
T ss_dssp EEEEEETTTCCCCEE-E-------ECCSSCEEEEEEETTTTEEEEEETTS----CEEEEETTTTEEEEEECBTTBTTCCE
T ss_pred eEEEEeCCCCcCceE-E-------cCCCCcEEEEEEcCCCCEEEEEcCCC----cEEEeECCCCceeEEeecCCCCCCCc
Confidence 478899987764322 1 23456788899999999877665433 28888999887654433211 0
Q ss_pred ---CeeeccCCc-----ccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCce-eeceeec-CeEEEEEEEEeecCcEEE
Q 008274 156 ---SWVNLHDCF-----TPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTC-LGPITEG-DWMVEQIVGVNEASGQVY 224 (571)
Q Consensus 156 ---~w~~~~~~~-----~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~-~~~lT~~-~~~~~~~~~~s~dg~~l~ 224 (571)
.|....... ...-....+++++ +++....+|. |.++++.+++ ...+..+ ...+..+ .|+|+++.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l 306 (420)
T 3vl1_A 230 NSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGV--ITVHNVFSKEQTIQLPSKFTCSCNSL-TVDGNNANYI 306 (420)
T ss_dssp EEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSC--EEEEETTTCCEEEEECCTTSSCEEEE-EECSSCTTEE
T ss_pred cEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCe--EEEEECCCCceeEEcccccCCCceeE-EEeCCCCCEE
Confidence 111100000 0000112455665 5655555664 6666765544 3333332 3345555 4999998555
Q ss_pred EEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 225 FTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 225 ~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
+++..++ .|+.+++. .+. . ....+.. ........+++++++++. .+.. ..+.+.++.+.
T Consensus 307 ~~g~~dg----~i~vwd~~-~~~-~--~~~~~~~~~~~~v~~~~~~~~~~l~s-~~~d---~~v~iw~~~~~ 366 (420)
T 3vl1_A 307 YAGYENG----MLAQWDLR-SPE-C--PVGEFLINEGTPINNVYFAAGALFVS-SGFD---TSIKLDIISDP 366 (420)
T ss_dssp EEEETTS----EEEEEETT-CTT-S--CSEEEEESTTSCEEEEEEETTEEEEE-ETTT---EEEEEEEECCT
T ss_pred EEEeCCC----eEEEEEcC-CCc-C--chhhhhccCCCCceEEEeCCCCEEEE-ecCC---ccEEEEeccCC
Confidence 5555554 34555662 221 0 2333432 222233345567765443 3222 36777776543
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=98.17 E-value=9.6e-05 Score=81.35 Aligned_cols=203 Identities=8% Similarity=-0.015 Sum_probs=114.0
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
....+.|||||++|+....+ ..|.+||+.+++.... +
T Consensus 57 ~v~~~~~s~~~~~l~~~~~d------------------------------------g~i~vw~~~~~~~~~~-~------ 93 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSDD------------------------------------FRIRVFNYNTGEKVVD-F------ 93 (814)
T ss_dssp CEEEEEEEGGGTEEEEEETT------------------------------------SEEEEEETTTCCEEEE-E------
T ss_pred cEEEEEEeCCCCEEEEEeCC------------------------------------CeEEEEECCCCcEEEE-E------
Confidence 45678899999988775321 1478899998875432 1
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc-eEEEEEeecCCeeeccCCcccCCCCCccCC-Ce-EEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ-RKVILVEELDSWVNLHDCFTPLDKGVTKYS-GG-FIW 180 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~-~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~-~~~ 180 (571)
......+..+.|+|||+.++...... .|.+.|++++. .......... .+. .+ .|++ ++ .++
T Consensus 94 -~~~~~~v~~~~~s~~~~~l~~~~~dg----~i~vw~~~~~~~~~~~~~~~~~-~v~------~~----~~~p~~~~~l~ 157 (814)
T 3mkq_A 94 -EAHPDYIRSIAVHPTKPYVLSGSDDL----TVKLWNWENNWALEQTFEGHEH-FVM------CV----AFNPKDPSTFA 157 (814)
T ss_dssp -ECCSSCEEEEEECSSSSEEEEEETTS----EEEEEEGGGTSEEEEEEECCSS-CEE------EE----EEETTEEEEEE
T ss_pred -ecCCCCEEEEEEeCCCCEEEEEcCCC----EEEEEECCCCceEEEEEcCCCC-cEE------EE----EEEcCCCCEEE
Confidence 22456788899999999877655332 37778888763 3322221111 110 00 2344 44 555
Q ss_pred EEecCCccEEEEEeCCCcee-eceeecC-eEEEEEEEEee--cCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe
Q 008274 181 ASEKTGFRHLYLHDINGTCL-GPITEGD-WMVEQIVGVNE--ASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL 256 (571)
Q Consensus 181 ~s~~~g~~~l~~~~~~~~~~-~~lT~~~-~~~~~~~~~s~--dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l 256 (571)
.+..+| .|.++++.+++. ..+..+. ..+... .|+| +++.|+..+ .++ .+..+++. .+. ....+
T Consensus 158 ~~~~dg--~v~vwd~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~l~~~~-~dg----~i~~~d~~-~~~----~~~~~ 224 (814)
T 3mkq_A 158 SGCLDR--TVKVWSLGQSTPNFTLTTGQERGVNYV-DYYPLPDKPYMITAS-DDL----TIKIWDYQ-TKS----CVATL 224 (814)
T ss_dssp EEETTS--EEEEEETTCSSCSEEEECCCTTCCCEE-EECCSTTCCEEEEEC-TTS----EEEEEETT-TTE----EEEEE
T ss_pred EEeCCC--eEEEEECCCCcceeEEecCCCCCEEEE-EEEECCCCCEEEEEe-CCC----EEEEEECC-CCc----EEEEE
Confidence 555555 466677655432 2232221 233333 4887 777666554 333 34444552 221 23334
Q ss_pred cCC-CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 257 TNG-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 257 t~~-~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
... .....+.++|+++.++..... ..+.+.++.+++....+.
T Consensus 225 ~~~~~~v~~~~~~~~~~~l~~~~~d----g~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 225 EGHMSNVSFAVFHPTLPIIISGSED----GTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETT----SCEEEEETTTCSEEEEEC
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCcEEEEee
Confidence 322 234556899999876654322 358888887776655443
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=98.16 E-value=0.00051 Score=66.88 Aligned_cols=204 Identities=11% Similarity=0.051 Sum_probs=112.3
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|||||++|+-...+ + .+.+||+.+++.... +
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~D-g-----------------------------------~v~iWd~~~~~~~~~-~----- 93 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQD-G-----------------------------------KLIIWDSYTTNKVHA-I----- 93 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETT-T-----------------------------------EEEEEETTTCCEEEE-E-----
T ss_pred CceEEEEECCCCCEEEEEeCC-C-----------------------------------cEEEEECCCCCcceE-e-----
Confidence 345678899999988653322 1 468899888765432 1
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce--EEEEEeec-CCeeeccCCcccCCCCCccCCCeEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR--KVILVEEL-DSWVNLHDCFTPLDKGVTKYSGGFI 179 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~--~~l~~~~~-~~w~~~~~~~~~~~~~~~~~~d~~~ 179 (571)
......+..+.|+|||++++...... .|.+.|+.+++. +....... ...+. .+ .+.+++.+
T Consensus 94 --~~~~~~v~~~~~s~~~~~l~s~~~d~----~v~iw~~~~~~~~~~~~~~~~~h~~~v~------~~----~~~~~~~l 157 (340)
T 1got_B 94 --PLRSSWVMTCAYAPSGNYVACGGLDN----ICSIYNLKTREGNVRVSRELAGHTGYLS------CC----RFLDDNQI 157 (340)
T ss_dssp --ECSSSCEEEEEECTTSSEEEEEETTC----EEEEEETTTCSBSCEEEEEEECCSSCEE------EE----EEEETTEE
T ss_pred --ecCCccEEEEEECCCCCEEEEEeCCC----eEEEEECccCCCcceeEEEecCCCccEE------EE----EECCCCcE
Confidence 12345677899999999877665432 377778776542 22221111 11111 00 12233434
Q ss_pred EEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC
Q 008274 180 WASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258 (571)
Q Consensus 180 ~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~ 258 (571)
+.+..+| .|.++++.+++. ..+......+..+ .|+|+++.++.. ..++. ..+| ++. .+. ....+..
T Consensus 158 ~s~s~d~--~i~~wd~~~~~~~~~~~~h~~~v~~~-~~~~~~~~l~sg-~~d~~--v~~w--d~~-~~~----~~~~~~~ 224 (340)
T 1got_B 158 VTSSGDT--TCALWDIETGQQTTTFTGHTGDVMSL-SLAPDTRLFVSG-ACDAS--AKLW--DVR-EGM----CRQTFTG 224 (340)
T ss_dssp EEEETTS--CEEEEETTTTEEEEEECCCSSCEEEE-EECTTSSEEEEE-ETTSC--EEEE--ETT-TCS----EEEEECC
T ss_pred EEEECCC--cEEEEECCCCcEEEEEcCCCCceEEE-EECCCCCEEEEE-eCCCc--EEEE--ECC-CCe----eEEEEcC
Confidence 4444444 366667666543 3344334345555 499998865544 44432 4444 552 221 2233433
Q ss_pred C-CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 259 G-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 259 ~-~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
. .....+.++|++++++... .. ..+.+.++.+++.+..+
T Consensus 225 h~~~v~~v~~~p~~~~l~s~s-~d---~~v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 225 HESDINAICFFPNGNAFATGS-DD---ATCRLFDLRADQELMTY 264 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEE-TT---SCEEEEETTTTEEEEEE
T ss_pred CcCCEEEEEEcCCCCEEEEEc-CC---CcEEEEECCCCcEEEEE
Confidence 2 2345668999998776543 32 25788888766654443
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=98.14 E-value=4.5e-05 Score=75.08 Aligned_cols=187 Identities=7% Similarity=-0.011 Sum_probs=95.7
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
|.+||+.+++....... ........+..+.|+|||+.++...... .|.+.|+.+++.......... .+..
T Consensus 117 v~lWd~~~~~~~~~~~~----~~~~h~~~V~~v~~spdg~~l~sgs~dg----~v~iwd~~~~~~~~~~~~h~~-~v~~- 186 (357)
T 4g56_B 117 VELWEILEKESLLVNKF----AKYEHDDIVKTLSVFSDGTQAVSGGKDF----SVKVWDLSQKAVLKSYNAHSS-EVNC- 186 (357)
T ss_dssp EEEC--------CCCCE----EECCCSSCEEEEEECSSSSEEEEEETTS----CEEEEETTTTEEEEEECCCSS-CEEE-
T ss_pred EEEeeccccceeEEEee----ccCCCCCCEEEEEECCCCCEEEEEeCCC----eEEEEECCCCcEEEEEcCCCC-CEEE-
Confidence 57788887654321100 0023455788899999999887665443 288889999876543322111 1110
Q ss_pred CCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCcee-eceee--cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 162 DCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITE--GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 162 ~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
-.|.+ +.+.+++....+|. |.++|+..++. ..++. ....+..+ .|+|++..++.++..++. ..+
T Consensus 187 v~~s~-------~~~~~~~s~~~dg~--v~~wd~~~~~~~~~~~~~~~~~~v~~v-~~sp~~~~~la~g~~d~~--i~~- 253 (357)
T 4g56_B 187 VAACP-------GKDTIFLSCGEDGR--ILLWDTRKPKPATRIDFCASDTIPTSV-TWHPEKDDTFACGDETGN--VSL- 253 (357)
T ss_dssp EEECT-------TCSSCEEEEETTSC--EEECCTTSSSCBCBCCCTTCCSCEEEE-EECTTSTTEEEEEESSSC--EEE-
T ss_pred EEEcc-------CCCceeeeeccCCc--eEEEECCCCceeeeeeeccccccccch-hhhhcccceEEEeecccc--eeE-
Confidence 01111 22335555445553 55667655543 22222 22234444 489988777777666553 444
Q ss_pred EEEeCCCCCCCCCCCeEecCC-CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 239 CAKLYPDWNHTLEAPVKLTNG-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~~-~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
+++. .+. ....+... .....+.|+|+++.++.+.+... .+.+.++.+++.++.
T Consensus 254 -wd~~-~~~----~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~---~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 254 -VNIK-NPD----SAQTSAVHSQNITGLAYSYHSSPFLASISEDC---TVAVLDADFSEVFRD 307 (357)
T ss_dssp -EESS-CGG----GCEEECCCSSCEEEEEECSSSSCCEEEEETTS---CEEEECTTSCEEEEE
T ss_pred -EECC-CCc----EeEEEeccceeEEEEEEcCCCCCEEEEEeCCC---EEEEEECCCCcEeEE
Confidence 4552 221 33344432 23456689999876666665433 577777766654433
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.14 E-value=0.00038 Score=69.50 Aligned_cols=185 Identities=15% Similarity=0.131 Sum_probs=109.4
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|++||+++++...+.. ......+..+.|+|||+.++...... .|.+.|+++++........... +.
T Consensus 114 ~v~lw~~~~~~~~~~~~-------~~~~~~v~~v~~s~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~-v~- 180 (401)
T 4aez_A 114 NVYVWNADSGSVSALAE-------TDESTYVASVKWSHDGSFLSVGLGNG----LVDIYDVESQTKLRTMAGHQAR-VG- 180 (401)
T ss_dssp EEEEEETTTCCEEEEEE-------CCTTCCEEEEEECTTSSEEEEEETTS----CEEEEETTTCCEEEEECCCSSC-EE-
T ss_pred eEEEeeCCCCcEeEeee-------cCCCCCEEEEEECCCCCEEEEECCCC----eEEEEECcCCeEEEEecCCCCc-eE-
Confidence 57999999988765533 12456788999999999887765443 3888899988754433211111 10
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCC--CceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDIN--GTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~--~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.+ .|++ .+++....+| .|.++++. +.....+......+..+. |+++++.|+..+... .+.
T Consensus 181 -----~~----~~~~-~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~s~~~d~-----~v~ 242 (401)
T 4aez_A 181 -----CL----SWNR-HVLSSGSRSG--AIHHHDVRIANHQIGTLQGHSSEVCGLA-WRSDGLQLASGGNDN-----VVQ 242 (401)
T ss_dssp -----EE----EEET-TEEEEEETTS--EEEEEETTSSSCEEEEEECCSSCEEEEE-ECTTSSEEEEEETTS-----CEE
T ss_pred -----EE----EECC-CEEEEEcCCC--CEEEEecccCcceeeEEcCCCCCeeEEE-EcCCCCEEEEEeCCC-----eEE
Confidence 00 2323 3555555555 45566654 333444544444566654 999998777665433 244
Q ss_pred EEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 239 CAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.+++. .+. ....+.. ........++|++..++.+.++ ..-..+.++++.+++....+.
T Consensus 243 iwd~~-~~~----~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g-s~d~~i~i~d~~~~~~~~~~~ 301 (401)
T 4aez_A 243 IWDAR-SSI----PKFTKTNHNAAVKAVAWCPWQSNLLATGGG-TMDKQIHFWNAATGARVNTVD 301 (401)
T ss_dssp EEETT-CSS----EEEEECCCSSCCCEEEECTTSTTEEEEECC-TTTCEEEEEETTTCCEEEEEE
T ss_pred EccCC-CCC----ccEEecCCcceEEEEEECCCCCCEEEEecC-CCCCEEEEEECCCCCEEEEEe
Confidence 44552 121 2223332 2234566899988877776542 233579999988777665553
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=98.13 E-value=0.0001 Score=72.45 Aligned_cols=199 Identities=12% Similarity=-0.039 Sum_probs=104.3
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
....+.|||||+.|+....+ + .+.+||+++++.......
T Consensus 54 ~v~~~~~~~~~~~l~~~~~d-g-----------------------------------~i~vwd~~~~~~~~~~~~----- 92 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGTD-R-----------------------------------NAYVWTLKGRTWKPTLVI----- 92 (372)
T ss_dssp CEEEEEEETTTTEEEEEETT-S-----------------------------------CEEEEEEETTEEEEEEEC-----
T ss_pred cccEEEEeCCCCEEEEEcCC-C-----------------------------------eEEEEECCCCeeeeeEEe-----
Confidence 34678899999888764321 1 367888888764332211
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-c--CCeeeccCCcccCCCCCccCCCe-EE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-L--DSWVNLHDCFTPLDKGVTKYSGG-FI 179 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~--~~w~~~~~~~~~~~~~~~~~~d~-~~ 179 (571)
......+..+.|+|||+.++...... . |.+.|+++++...+.... . ...+. .+ .+++++ ++
T Consensus 93 -~~~~~~v~~~~~~~~~~~l~~~~~d~--~--v~i~d~~~~~~~~~~~~~~~~~~~~i~------~~----~~~~~~~~l 157 (372)
T 1k8k_C 93 -LRINRAARCVRWAPNEKKFAVGSGSR--V--ISICYFEQENDWWVCKHIKKPIRSTVL------SL----DWHPNSVLL 157 (372)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEETTS--S--EEEEEEETTTTEEEEEEECTTCCSCEE------EE----EECTTSSEE
T ss_pred -ecCCCceeEEEECCCCCEEEEEeCCC--E--EEEEEecCCCcceeeeeeecccCCCee------EE----EEcCCCCEE
Confidence 23455788899999999877765433 2 566666665532221111 1 11110 00 234444 55
Q ss_pred EEEecCCccEEEEEe----------------C-CCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 180 WASEKTGFRHLYLHD----------------I-NGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 180 ~~s~~~g~~~l~~~~----------------~-~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
+....+|.-.+|-+. . .+.....+......+..+ .|+|+++.|+..+. ++ .+..+++
T Consensus 158 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~-d~----~i~i~d~ 231 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGV-CFSANGSRVAWVSH-DS----TVCLADA 231 (372)
T ss_dssp EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEE-EECSSSSEEEEEET-TT----EEEEEEG
T ss_pred EEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEE-EECCCCCEEEEEeC-CC----EEEEEEC
Confidence 555556644444321 1 122333443333345555 49999987776653 32 3444555
Q ss_pred CCCCCCCCCCCeEecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCC
Q 008274 243 YPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 294 (571)
Q Consensus 243 ~~~g~~~~~~~~~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~ 294 (571)
. .+. ....+.... ....+.++|++++++.. .. . .+.++++.+
T Consensus 232 ~-~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d-~--~i~i~~~~~ 274 (372)
T 1k8k_C 232 D-KKM----AVATLASETLPLLAVTFITESSLVAAG--HD-C--FPVLFTYDS 274 (372)
T ss_dssp G-GTT----EEEEEECSSCCEEEEEEEETTEEEEEE--TT-S--SCEEEEEET
T ss_pred C-CCc----eeEEEccCCCCeEEEEEecCCCEEEEE--eC-C--eEEEEEccC
Confidence 2 221 233333322 34566899999765543 22 2 455555544
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.13 E-value=0.00014 Score=72.83 Aligned_cols=211 Identities=11% Similarity=0.050 Sum_probs=114.5
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCC---CceEEEeccCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG---GPVSWMDLQCGG 101 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~---~~~~~~~~~~~~ 101 (571)
...+.|||||++|+....+ + .|.+||+.+ +......+
T Consensus 70 v~~~~~s~~~~~l~~~~~d-g-----------------------------------~v~vw~~~~~~~~~~~~~~~---- 109 (416)
T 2pm9_A 70 FNDLDWSHNNKIIAGALDN-G-----------------------------------SLELYSTNEANNAINSMARF---- 109 (416)
T ss_dssp EEEEEECSSSSCEEEEESS-S-----------------------------------CEEEECCSSTTSCCCEEEEC----
T ss_pred eEEEEECCCCCeEEEEccC-C-----------------------------------eEEEeecccccccccchhhc----
Confidence 4578899999998775432 1 256777776 22122222
Q ss_pred CCCCCCCceeEEEEEccC-CeEEEEEEeccCccEEEEEEECCCCc------eEEEEEeecCCeeeccCCcccCCCCCccC
Q 008274 102 TDQNYDEEYLARVNWMHG-NILTAQVLNRSQTKLKVLKFDIKTGQ------RKVILVEELDSWVNLHDCFTPLDKGVTKY 174 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspD-g~~i~~~~~r~~~~~~i~~~d~~~g~------~~~l~~~~~~~w~~~~~~~~~~~~~~~~~ 174 (571)
......+..+.|+|| +++++...... .|.+.|+.+++ ......... ........ ..++
T Consensus 110 ---~~h~~~v~~~~~~~~~~~~l~s~~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~----~~~~~v~~----~~~~ 174 (416)
T 2pm9_A 110 ---SNHSSSVKTVKFNAKQDNVLASGGNNG----EIFIWDMNKCTESPSNYTPLTPGQSM----SSVDEVIS----LAWN 174 (416)
T ss_dssp ---CCSSSCCCEEEECSSSTTBEEEECSSS----CEEBCBTTTTSSCTTTCCCBCCCCSC----CSSCCCCE----EEEC
T ss_pred ---cCCccceEEEEEcCCCCCEEEEEcCCC----eEEEEECCCCcccccccccccccccc----CCCCCeeE----EEeC
Confidence 234556778999999 66666554333 38888998876 211110000 00000000 1334
Q ss_pred CC--eEEEEEecCCccEEEEEeCCCceee-ceeec------CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCC
Q 008274 175 SG--GFIWASEKTGFRHLYLHDINGTCLG-PITEG------DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPD 245 (571)
Q Consensus 175 ~d--~~~~~s~~~g~~~l~~~~~~~~~~~-~lT~~------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~ 245 (571)
++ .+++....+| .|.++++.+++.. .+... ...+..+ .|+|+++.+++++..++. ...|+.+++...
T Consensus 175 ~~~~~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~~~~~d~~-~~~i~~~d~~~~ 250 (416)
T 2pm9_A 175 QSLAHVFASAGSSN--FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVV-EWHPKNSTRVATATGSDN-DPSILIWDLRNA 250 (416)
T ss_dssp SSCTTEEEEESSSS--CEEEEETTTTEEEEEECCCCCSSCCCCCEEEE-EECSSCTTEEEEEECCSS-SCCCCEEETTST
T ss_pred CCCCcEEEEEcCCC--CEEEEECCCCCcceEEeccccccccCCceEEE-EECCCCCCEEEEEECCCC-CceEEEEeCCCC
Confidence 44 3555555555 3667777665533 33322 3345555 499998656666555431 124555566221
Q ss_pred CCCCCCCCeEec--CCCceEEEEECC-CCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 246 WNHTLEAPVKLT--NGKGKHVAVLDH-NMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 246 g~~~~~~~~~lt--~~~g~~~~~~s~-~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.. ....+. .......+.++| ++++++..... ..+.+.++.+++.+..+.
T Consensus 251 ~~----~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d----g~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 251 NT----PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD----NTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp TS----CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS----SEEEEECSSSCCEEEEEE
T ss_pred CC----CcEEeecCccCceeEEEeCCCCCCeEEEEeCC----CCEEEeeCCCCccceeec
Confidence 11 222333 223455668999 78766554332 368888887777666554
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.4e-05 Score=80.27 Aligned_cols=182 Identities=13% Similarity=0.093 Sum_probs=96.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC---Cc-eE-EEEEeecC
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT---GQ-RK-VILVEELD 155 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~---g~-~~-~l~~~~~~ 155 (571)
.|.+||+.+++....... ......+..+.|+|||++++...... .|.+.|+.+ +. .. .+..+...
T Consensus 46 ~v~iw~~~~~~~~~~~~~------~~~~~~v~~~~~s~~~~~l~~~~~dg----~v~vw~~~~~~~~~~~~~~~~~h~~~ 115 (416)
T 2pm9_A 46 SLELWSLLAADSEKPIAS------LQVDSKFNDLDWSHNNKIIAGALDNG----SLELYSTNEANNAINSMARFSNHSSS 115 (416)
T ss_dssp CCEEEESSSGGGCSCSCC------CCCSSCEEEEEECSSSSCEEEEESSS----CEEEECCSSTTSCCCEEEECCCSSSC
T ss_pred eEEEEEccCCCCCcEEEE------EecCCceEEEEECCCCCeEEEEccCC----eEEEeecccccccccchhhccCCccc
Confidence 468899998753211110 22455788899999999877765433 277777776 22 21 12111111
Q ss_pred CeeeccCCcccCCCCCccCCC--eEEEEEecCCccEEEEEeCCCce-------eece---eecCeEEEEEEEEeecCcEE
Q 008274 156 SWVNLHDCFTPLDKGVTKYSG--GFIWASEKTGFRHLYLHDINGTC-------LGPI---TEGDWMVEQIVGVNEASGQV 223 (571)
Q Consensus 156 ~w~~~~~~~~~~~~~~~~~~d--~~~~~s~~~g~~~l~~~~~~~~~-------~~~l---T~~~~~~~~~~~~s~dg~~l 223 (571)
+ ..+ .++++ .+++....+|. |+++++.+++ ...+ ......+..+ .|++++..+
T Consensus 116 --v------~~~----~~~~~~~~~l~s~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~ 180 (416)
T 2pm9_A 116 --V------KTV----KFNAKQDNVLASGGNNGE--IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISL-AWNQSLAHV 180 (416)
T ss_dssp --C------CEE----EECSSSTTBEEEECSSSC--EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEE-EECSSCTTE
T ss_pred --e------EEE----EEcCCCCCEEEEEcCCCe--EEEEECCCCccccccccccccccccCCCCCeeEE-EeCCCCCcE
Confidence 0 000 23343 36666555553 6666665543 1112 1222234445 499996666
Q ss_pred EEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC-------CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 224 YFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-------GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 224 ~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-------~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
++++..++. |..+++. .+. ....+.. ......+.++|++..++++.+.....+.+.++++.++.
T Consensus 181 l~~~~~dg~----v~iwd~~-~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 181 FASAGSSNF----ASIWDLK-AKK----EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp EEEESSSSC----EEEEETT-TTE----EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred EEEEcCCCC----EEEEECC-CCC----cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 666665542 4444552 121 2223332 22345668999986555555554434468888886653
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=98.10 E-value=3.5e-05 Score=77.48 Aligned_cols=200 Identities=12% Similarity=0.017 Sum_probs=112.2
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|+....+ ..+++||+.+++.... .
T Consensus 60 ~~~~~s~~g~~l~~~~~d------------------------------------~~v~i~d~~~~~~~~~---------~ 94 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARLD------------------------------------GHDFLFNTIIRDGSKM---------L 94 (420)
T ss_dssp TTCEEEEEETTEEEEEET------------------------------------TEEEEEECCSEETTTT---------S
T ss_pred cceeeeecCCeEEEEEcC------------------------------------CcEEEEEecccceeeE---------E
Confidence 468899999999876543 1468888887643211 1
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
..........|+|||+.++...... .|.+.|+++++...+...... .+. .+ .+++++ +++....
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~h~~-~v~------~~----~~~~~~~~l~s~s~ 159 (420)
T 3vl1_A 95 KRADYTAVDTAKLQMRRFILGTTEG----DIKVLDSNFNLQREIDQAHVS-EIT------KL----KFFPSGEALISSSQ 159 (420)
T ss_dssp CSCCEEEEEEECSSSCEEEEEETTS----CEEEECTTSCEEEEETTSSSS-CEE------EE----EECTTSSEEEEEET
T ss_pred ecCCceEEEEEecCCCEEEEEECCC----CEEEEeCCCcceeeecccccC-ccE------EE----EECCCCCEEEEEeC
Confidence 2234555668999999877765433 388889998876544211111 110 00 234444 5555555
Q ss_pred CCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC----C
Q 008274 185 TGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN----G 259 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~----~ 259 (571)
+| .|.++++..++ ...+......+..+. |+|+++.|+..+. ++. ..+| ++. .+. ....+.. .
T Consensus 160 d~--~i~iwd~~~~~~~~~~~~h~~~v~~~~-~~~~~~~l~s~~~-d~~--v~iw--d~~-~~~----~~~~~~~~~~~~ 226 (420)
T 3vl1_A 160 DM--QLKIWSVKDGSNPRTLIGHRATVTDIA-IIDRGRNVLSASL-DGT--IRLW--ECG-TGT----TIHTFNRKENPH 226 (420)
T ss_dssp TS--EEEEEETTTCCCCEEEECCSSCEEEEE-EETTTTEEEEEET-TSC--EEEE--ETT-TTE----EEEEECBTTBTT
T ss_pred CC--eEEEEeCCCCcCceEEcCCCCcEEEEE-EcCCCCEEEEEcC-CCc--EEEe--ECC-CCc----eeEEeecCCCCC
Confidence 55 56777766554 344554444566654 9999998875554 331 3333 441 111 1111111 0
Q ss_pred ---------------------CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 260 ---------------------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 260 ---------------------~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.....+.++|++++++..... ..+.++++.+++....+.
T Consensus 227 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~ 286 (420)
T 3vl1_A 227 DGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS----GVITVHNVFSKEQTIQLP 286 (420)
T ss_dssp CCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT----SCEEEEETTTCCEEEEEC
T ss_pred CCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC----CeEEEEECCCCceeEEcc
Confidence 011123568898877654433 358888887777655543
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.10 E-value=9e-05 Score=72.48 Aligned_cols=134 Identities=10% Similarity=-0.111 Sum_probs=75.4
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
|.+||+.+++....-.. .........+.|+|++. +++... .++ .|.+.|+.+++......... ..+..
T Consensus 194 v~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~p~~~~~l~sg~-~dg---~v~~wd~~~~~~~~~~~~h~-~~v~~ 262 (344)
T 4gqb_B 194 ILLWDTRCPKPASQIGC------SAPGYLPTSLAWHPQQSEVFVFGD-ENG---TVSLVDTKSTSCVLSSAVHS-QCVTG 262 (344)
T ss_dssp EEEEETTSSSCEEECC----------CCCEEEEEECSSCTTEEEEEE-TTS---EEEEEESCC--CCEEEECCS-SCEEE
T ss_pred cccccccccceeeeeec------ceeeccceeeeecCCCCcceEEec-cCC---cEEEEECCCCcEEEEEcCCC-CCEEE
Confidence 67899998775432110 12334567889999765 555443 332 48888999887543222111 11110
Q ss_pred cCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
+ .+++++ +++....+| .|.++|..+++...+....-.+..+. |+|+++.|+.++..++. ..+|
T Consensus 263 ------v----~fsp~g~~~lasgs~D~--~i~vwd~~~~~~~~~~~H~~~V~~v~-~sp~~~~llas~s~D~~--v~~w 327 (344)
T 4gqb_B 263 ------L----VFSPHSVPFLASLSEDC--SLAVLDSSLSELFRSQAHRDFVRDAT-WSPLNHSLLTTVGWDHQ--VVHH 327 (344)
T ss_dssp ------E----EECSSSSCCEEEEETTS--CEEEECTTCCEEEEECCCSSCEEEEE-ECSSSTTEEEEEETTSC--EEEE
T ss_pred ------E----EEccCCCeEEEEEeCCC--eEEEEECCCCcEEEEcCCCCCEEEEE-EeCCCCeEEEEEcCCCe--EEEE
Confidence 0 233433 555544555 36677888777665554444566664 99999988888776653 5555
Q ss_pred EEE
Q 008274 239 CAK 241 (571)
Q Consensus 239 ~~~ 241 (571)
.++
T Consensus 328 ~v~ 330 (344)
T 4gqb_B 328 VVP 330 (344)
T ss_dssp ECC
T ss_pred ECC
Confidence 443
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=98.09 E-value=0.00036 Score=69.95 Aligned_cols=177 Identities=10% Similarity=0.094 Sum_probs=95.1
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
+.+||+.+++.... + ......+..+.|+|||+.++...... .|.+.|+.+|++....... ..|+..
T Consensus 174 i~iwd~~~~~~~~~-~-------~~h~~~V~~v~~~p~~~~l~s~s~D~----~i~~wd~~~~~~~~~~~~h-~~~v~~- 239 (410)
T 1vyh_C 174 IKLWDFQGFECIRT-M-------HGHDHNVSSVSIMPNGDHIVSASRDK----TIKMWEVQTGYCVKTFTGH-REWVRM- 239 (410)
T ss_dssp CCEEETTSSCEEEC-C-------CCCSSCEEEEEECSSSSEEEEEETTS----EEEEEETTTCCEEEEEECC-SSCEEE-
T ss_pred EEEEeCCCCceeEE-E-------cCCCCCEEEEEEeCCCCEEEEEeCCC----eEEEEECCCCcEEEEEeCC-CccEEE-
Confidence 46788887764322 2 23456788999999999777654332 4888899998864433221 122221
Q ss_pred CCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCc------------------
Q 008274 162 DCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASG------------------ 221 (571)
Q Consensus 162 ~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~------------------ 221 (571)
. .+++++ +++....+|. |.+++..+++. ..+......+..+ .|+|++.
T Consensus 240 --~-------~~~~~g~~l~s~s~D~~--v~vwd~~~~~~~~~~~~h~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (410)
T 1vyh_C 240 --V-------RPNQDGTLIASCSNDQT--VRVWVVATKECKAELREHRHVVECI-SWAPESSYSSISEATGSETKKSGKP 307 (410)
T ss_dssp --E-------EECTTSSEEEEEETTSC--EEEEETTTCCEEEEECCCSSCEEEE-EECCSCGGGGGGGCCSCC-------
T ss_pred --E-------EECCCCCEEEEEcCCCe--EEEEECCCCceeeEecCCCceEEEE-EEcCcccccchhhhccccccccCCC
Confidence 1 123444 5555555664 44455544433 3343333344444 4777632
Q ss_pred -EEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 222 -QVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 222 -~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
.+++++..++ .+..+++. .+. ....+.. ......+.++|+|++++- .+.. ..+.+.++.+++.
T Consensus 308 g~~l~sgs~D~----~i~iwd~~-~~~----~~~~~~~h~~~v~~v~~~~~g~~l~s-~s~D---~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 308 GPFLLSGSRDK----TIKMWDVS-TGM----CLMTLVGHDNWVRGVLFHSGGKFILS-CADD---KTLRVWDYKNKRC 372 (410)
T ss_dssp CCEEEEEETTS----EEEEEETT-TTE----EEEEEECCSSCEEEEEECSSSSCEEE-EETT---TEEEEECCTTSCC
T ss_pred CCEEEEEeCCC----eEEEEECC-CCc----eEEEEECCCCcEEEEEEcCCCCEEEE-EeCC---CeEEEEECCCCce
Confidence 2444554444 34445552 221 2223332 223456689999987654 3332 2677777655543
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.07 E-value=0.00026 Score=70.80 Aligned_cols=177 Identities=6% Similarity=-0.081 Sum_probs=97.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|++||+.+++....- ......+..+.|+||++.++...... .|.+.|+.+++.......... .+.
T Consensus 228 ~i~~~d~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~-~i~- 293 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKL--------IGHHGPISVLEFNDTNKLLLSASDDG----TLRIWHGGNGNSQNCFYGHSQ-SIV- 293 (425)
T ss_dssp CEEEEETTCSSCSEEE--------CCCSSCEEEEEEETTTTEEEEEETTS----CEEEECSSSBSCSEEECCCSS-CEE-
T ss_pred eEEEEEcCCCceeeee--------ccCCCceEEEEECCCCCEEEEEcCCC----EEEEEECCCCccceEecCCCc-cEE-
Confidence 4778888876654331 22456778899999999777665333 388889988775433321111 110
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceee-ceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLG-PITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~-~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
. ..++++++++....+| .|+++++.+++.. .+......+..+ .|+|+++.|+..+.. + ...+|.
T Consensus 294 -----~----~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~~d-g--~i~i~~ 358 (425)
T 1r5m_A 294 -----S----ASWVGDDKVISCSMDG--SVRLWSLKQNTLLALSIVDGVPIFAG-RISQDGQKYAVAFMD-G--QVNVYD 358 (425)
T ss_dssp -----E----EEEETTTEEEEEETTS--EEEEEETTTTEEEEEEECTTCCEEEE-EECTTSSEEEEEETT-S--CEEEEE
T ss_pred -----E----EEECCCCEEEEEeCCC--cEEEEECCCCcEeEecccCCccEEEE-EEcCCCCEEEEEECC-C--eEEEEE
Confidence 0 0234555555544444 5777787666543 333334445555 499999977766543 3 255554
Q ss_pred EEeCCCCCC---------------CCCCCeEecCC--C-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 240 AKLYPDWNH---------------TLEAPVKLTNG--K-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 240 ~~l~~~g~~---------------~~~~~~~lt~~--~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
+.- .... .......+... . ....+.++|++++++..... ..++++++
T Consensus 359 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iw~~ 423 (425)
T 1r5m_A 359 LKK--LNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL----QEGSVVAI 423 (425)
T ss_dssp CHH--HHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS----SCCEEEEC
T ss_pred CCC--CccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC----ceEEEEee
Confidence 432 1100 00012223322 1 44566899999977654433 24555554
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.07 E-value=0.00044 Score=69.05 Aligned_cols=207 Identities=12% Similarity=0.047 Sum_probs=108.4
Q ss_pred EEEEEECCCCceE-EEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEe------
Q 008274 81 RLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVE------ 152 (571)
Q Consensus 81 ~l~~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~------ 152 (571)
.|.++|.++++.. .+.+.. ..+.. ....-..+.+||||++++... .. ....|.++|+++++... |.-.
T Consensus 150 ~VsviD~~t~~vv~~I~v~g-~~r~~-~g~~P~~~~~spDGk~lyV~n-~~-~~~~VsVID~~t~kvv~~I~v~g~~~~~ 225 (426)
T 3c75_H 150 YVEVFDPVTFLPIADIELPD-APRFL-VGTYQWMNALTPDNKNLLFYQ-FS-PAPAVGVVDLEGKTFDRMLDVPDCYHIF 225 (426)
T ss_dssp EEEEECTTTCCEEEEEEETT-CCCCC-BSCCGGGSEECTTSSEEEEEE-CS-SSCEEEEEETTTTEEEEEEECCSEEEEE
T ss_pred EEEEEECCCCcEEEEEECCC-ccccc-cCCCcceEEEcCCCCEEEEEe-cC-CCCeEEEEECCCCeEEEEEEcCCceeec
Confidence 5788999988764 343310 00000 001122468999999766653 32 12358999999987532 2110
Q ss_pred -----------ecCC--eeecc---------CCcccC----CCCC--ccCCCeEEEEEecCCccEEEEEeCCCceeecee
Q 008274 153 -----------ELDS--WVNLH---------DCFTPL----DKGV--TKYSGGFIWASEKTGFRHLYLHDINGTCLGPIT 204 (571)
Q Consensus 153 -----------~~~~--w~~~~---------~~~~~~----~~~~--~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT 204 (571)
.++. |++.. ..|... .... ..+++++++.+. .| .++.+|..++..+.+.
T Consensus 226 p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g--~V~ViD~~~~~~~v~~ 302 (426)
T 3c75_H 226 PASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TG--KIFQADLTAEGATFRA 302 (426)
T ss_dssp EEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TS--EEEEEEECSSCEEECC
T ss_pred cCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CC--cEEEEeccCCceEEee
Confidence 0010 11110 000000 0000 112233555443 33 6888887665432221
Q ss_pred e----------cCeEEEE--EEEEeecCcEEEEEEcCCC-----CceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEE
Q 008274 205 E----------GDWMVEQ--IVGVNEASGQVYFTGTLDG-----PLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVL 267 (571)
Q Consensus 205 ~----------~~~~~~~--~~~~s~dg~~l~~~~~~~~-----~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~ 267 (571)
. ..+.... ...+++|++++|+.....+ .....|..+|+.. .. ....+.-+..-....+
T Consensus 303 ~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T-~k----vv~~I~vg~~P~gia~ 377 (426)
T 3c75_H 303 PIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET-GE----RINKIELGHEIDSINV 377 (426)
T ss_dssp CEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT-CC----EEEEEEEEEEECEEEE
T ss_pred eeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC-Ce----EEEEEECCCCcCeEEE
Confidence 0 0111111 2358999999999864211 1246799999832 21 3444443333456689
Q ss_pred CCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 268 DHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 268 s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
++||+..+|+.... -..+.++|+.+++.++.+
T Consensus 378 spDg~~~lyv~n~~--s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 378 SQDAEPLLYALSAG--TQTLHIYDAATGEELRSV 409 (426)
T ss_dssp CCSSSCEEEEEETT--TTEEEEEETTTCCEEEEE
T ss_pred ccCCCEEEEEEcCC--CCeEEEEECCCCCEEEEe
Confidence 99999555665532 348999999889887765
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=98.07 E-value=5.3e-05 Score=74.59 Aligned_cols=175 Identities=12% Similarity=0.030 Sum_probs=93.7
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCceEEEEEe-ecCCeee
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQRKVILVE-ELDSWVN 159 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~-~~~~w~~ 159 (571)
|.+||+.+++.... + ......+..+.|+|++. .++... .+. .|.+.|+.+++....... .......
T Consensus 163 v~iwd~~~~~~~~~-~-------~~h~~~v~~v~~s~~~~~~~~s~~-~dg---~v~~wd~~~~~~~~~~~~~~~~~~v~ 230 (357)
T 4g56_B 163 VKVWDLSQKAVLKS-Y-------NAHSSEVNCVAACPGKDTIFLSCG-EDG---RILLWDTRKPKPATRIDFCASDTIPT 230 (357)
T ss_dssp EEEEETTTTEEEEE-E-------CCCSSCEEEEEECTTCSSCEEEEE-TTS---CEEECCTTSSSCBCBCCCTTCCSCEE
T ss_pred EEEEECCCCcEEEE-E-------cCCCCCEEEEEEccCCCceeeeec-cCC---ceEEEECCCCceeeeeeecccccccc
Confidence 67889998875433 2 22455678899999987 444443 332 277889988765432111 1111110
Q ss_pred ccCCcccCCCCCccCCC--eEEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 160 LHDCFTPLDKGVTKYSG--GFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d--~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
. ..++++ .++.....++ .|.++++.+++. ..+......+..+ .|+|+++.+++++..++. ..
T Consensus 231 ------~----v~~sp~~~~~la~g~~d~--~i~~wd~~~~~~~~~~~~~~~~v~~l-~~sp~~~~~lasgs~D~~--i~ 295 (357)
T 4g56_B 231 ------S----VTWHPEKDDTFACGDETG--NVSLVNIKNPDSAQTSAVHSQNITGL-AYSYHSSPFLASISEDCT--VA 295 (357)
T ss_dssp ------E----EEECTTSTTEEEEEESSS--CEEEEESSCGGGCEEECCCSSCEEEE-EECSSSSCCEEEEETTSC--EE
T ss_pred ------c----hhhhhcccceEEEeeccc--ceeEEECCCCcEeEEEeccceeEEEE-EEcCCCCCEEEEEeCCCE--EE
Confidence 0 022333 3555555554 366677666543 3343333345555 499999777777666553 44
Q ss_pred EEEEEeCCCCCCCCCCCeEecCCCceEEEEECC-CCCEEEEEeeCCCCCCEEEEEEcCC
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDH-NMRNFVDFHDSLDSPPRILLCSLQD 294 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~-~g~~~v~~~s~~~~p~~l~~~~~~~ 294 (571)
|| ++ ... + ....+........+.||| |++.++ +.+... .+.+.++..
T Consensus 296 iw--d~--~~~-~--~~~~~~H~~~V~~vafsP~d~~~l~-s~s~Dg---~v~iW~~~~ 343 (357)
T 4g56_B 296 VL--DA--DFS-E--VFRDLSHRDFVTGVAWSPLDHSKFT-TVGWDH---KVLHHHLPS 343 (357)
T ss_dssp EE--CT--TSC-E--EEEECCCSSCEEEEEECSSSTTEEE-EEETTS---CEEEEECC-
T ss_pred EE--EC--CCC-c--EeEECCCCCCEEEEEEeCCCCCEEE-EEcCCC---eEEEEECCC
Confidence 44 55 222 0 122222333455668998 677654 444432 466667644
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.06 E-value=0.0026 Score=61.42 Aligned_cols=182 Identities=7% Similarity=-0.006 Sum_probs=97.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEec--cCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNR--SQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r--~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
.|+++|.++++.+.+... .........+.++|||++++..... ......|+++|.++++.+.+...... .
T Consensus 113 ~i~~~d~~~~~~~~~~~~------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~ 184 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIED------LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISV--A 184 (333)
T ss_dssp EEEEECTTSCSCEEEECS------SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESS--E
T ss_pred eEEEEeCCCCEEEEEEcc------CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCc--c
Confidence 688899988876633211 1123456778999999855543221 11235799999998887766442211 0
Q ss_pred eccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCC--Cceeecee-----e--cCeEEEEEEEEeecCcEEEEEEc
Q 008274 159 NLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDIN--GTCLGPIT-----E--GDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~--~~~~~~lT-----~--~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
. ...+++|+ .+++++. +...|++++.+ +...+.+. . +......+ .++++|+ ||+...
T Consensus 185 ~----------~i~~~~dg~~l~v~~~-~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i-~~d~~G~-l~v~~~ 251 (333)
T 2dg1_A 185 N----------GIALSTDEKVLWVTET-TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSC-CIDSDDN-LYVAMY 251 (333)
T ss_dssp E----------EEEECTTSSEEEEEEG-GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEE-EEBTTCC-EEEEEE
T ss_pred c----------ceEECCCCCEEEEEeC-CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCce-EECCCCC-EEEEEc
Confidence 0 01234554 4444433 12368888874 33222211 0 11233334 4888886 555543
Q ss_pred CCCCceeEEEEEEeCCCCCCCCCCCeEecCCC-------ceEEEEECCCCCEEEEEeeCC--CCCCEEEEEEcC
Q 008274 229 LDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-------GKHVAVLDHNMRNFVDFHDSL--DSPPRILLCSLQ 293 (571)
Q Consensus 229 ~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~-------g~~~~~~s~~g~~~v~~~s~~--~~p~~l~~~~~~ 293 (571)
.. ..|++++. ++. ....+.... ....+.+++|++.+++..... .....++.+++.
T Consensus 252 ~~----~~v~~~d~--~g~----~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 252 GQ----GRVLVFNK--RGY----PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp TT----TEEEEECT--TSC----EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred CC----CEEEEECC--CCC----EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 32 35666665 442 233333221 234568889988776665543 234567777753
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=98.06 E-value=0.00043 Score=73.16 Aligned_cols=205 Identities=10% Similarity=0.005 Sum_probs=112.9
Q ss_pred CceEEECC--CCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCC------ceEEEe
Q 008274 25 KTGYWWSL--DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGG------PVSWMD 96 (571)
Q Consensus 25 ~~~~~wSP--Dg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~------~~~~~~ 96 (571)
...+.||| ||++||....+ + .+.+||+.++ +...+.
T Consensus 67 v~~~~~sp~~~~~~l~s~~~d-g-----------------------------------~v~vw~~~~~~~~~~~~~~~~~ 110 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDES-G-----------------------------------KVIVWGWTFDKESNSVEVNVKS 110 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETT-S-----------------------------------EEEEEEEEEEGGGTEEEEEEEE
T ss_pred EEEEEECcCCCCCEEEEecCC-C-----------------------------------EEEEEeCCCCcccccccccccc
Confidence 56788999 99988764321 1 3677888654 222221
Q ss_pred ccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC
Q 008274 97 LQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG 176 (571)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d 176 (571)
.- ......+..+.|+|||+.++...........|+..| +++......... ..+. .+ .++++
T Consensus 111 ~~------~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~-~~v~------~~----~~~~~ 171 (615)
T 1pgu_A 111 EF------QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHS-QRIN------AC----HLKQS 171 (615)
T ss_dssp EE------ECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCS-SCEE------EE----EECSS
T ss_pred hh------hcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCC-ccEE------EE----EECCC
Confidence 10 224557888999999998887765543345677777 444322111111 1111 00 22343
Q ss_pred e--EEEEEecCCccEEEEEeCCCcee-eceeecCe---EEEEEEEEeec-CcEEEEEEcCCCCceeEEEEEEeCCCCCCC
Q 008274 177 G--FIWASEKTGFRHLYLHDINGTCL-GPITEGDW---MVEQIVGVNEA-SGQVYFTGTLDGPLESHLYCAKLYPDWNHT 249 (571)
Q Consensus 177 ~--~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~---~~~~~~~~s~d-g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~ 249 (571)
+ +++....+| .|.+++...++. ..+..... .+..+ .|+|+ ++.|+..+. ++ .++.+++. .+.
T Consensus 172 ~~~~l~~~~~d~--~v~vwd~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~~~~~-dg----~i~vwd~~-~~~-- 240 (615)
T 1pgu_A 172 RPMRSMTVGDDG--SVVFYQGPPFKFSASDRTHHKQGSFVRDV-EFSPDSGEFVITVGS-DR----KISCFDGK-SGE-- 240 (615)
T ss_dssp SSCEEEEEETTT--EEEEEETTTBEEEEEECSSSCTTCCEEEE-EECSTTCCEEEEEET-TC----CEEEEETT-TCC--
T ss_pred CCcEEEEEeCCC--cEEEEeCCCcceeeeecccCCCCceEEEE-EECCCCCCEEEEEeC-CC----eEEEEECC-CCC--
Confidence 3 455555555 466667666553 33333332 35555 49999 877666554 33 34445552 222
Q ss_pred CCCCeEe-----cCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 250 LEAPVKL-----TNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 250 ~~~~~~l-----t~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
....+ ..........++ ++++++..... ..+.+.++.+++.+..+.
T Consensus 241 --~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 241 --FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD----ATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp --EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT----SEEEEEETTTTEEEEEEE
T ss_pred --EeEEecccccccCCceEEEEEc-CCCEEEEEcCC----CcEEEEECCCCcEEEEEc
Confidence 23334 222334566888 88877655432 378888887777655543
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00046 Score=67.98 Aligned_cols=182 Identities=8% Similarity=0.041 Sum_probs=92.2
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECC-CCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK-TGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~-~g~~~~l~~~~~~~w~~ 159 (571)
.++.+|.++|+.+.+.... .........++|+|||++++.... . .|..+|++ +|+...+......+.
T Consensus 17 ~~~~~d~~~g~l~~~~~~~-----~~~~~~~~~~a~spdg~~l~~~~~-~----~v~~~~~~~~g~~~~~~~~~~~g~-- 84 (365)
T 1jof_A 17 FTVQFDDEKLTCKLIKRTE-----IPQDEPISWMTFDHERKNIYGAAM-K----KWSSFAVKSPTEIVHEASHPIGGH-- 84 (365)
T ss_dssp EEEEEETTTTEEEEEEEEE-----CCTTCCCSEEEECTTSSEEEEEEB-T----EEEEEEEEETTEEEEEEEEECCSS--
T ss_pred EEEEEECCCCCEEEeeEEc-----cCCCCCCcEEEECCCCCEEEEEcc-c----eEEEEEECCCCCEEEeeEeecCCC--
Confidence 3445566788776653210 012224456889999997765543 3 36666665 777655443221110
Q ss_pred ccCCcccCCCCCccCCCe-E--EEEEe-------------cCCccEEEEEeCCCceeeceee----cCeEEEEEEEEeec
Q 008274 160 LHDCFTPLDKGVTKYSGG-F--IWASE-------------KTGFRHLYLHDINGTCLGPITE----GDWMVEQIVGVNEA 219 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~--~~~s~-------------~~g~~~l~~~~~~~~~~~~lT~----~~~~~~~~~~~s~d 219 (571)
+.. ..+++|+ . ++.++ .+|.-.+|.++.++.....++. .......+ .|+||
T Consensus 85 ------~~~--~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~spd 155 (365)
T 1jof_A 85 ------PRA--NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGM-VFDPT 155 (365)
T ss_dssp ------GGG--GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEE-EECTT
T ss_pred ------Ccc--EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEE-EECCC
Confidence 100 1345554 2 33443 3444455555544443333331 22234445 49999
Q ss_pred CcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec---CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 220 SGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT---NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 220 g~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt---~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
|++||+..... ..|+.+++..+|. ......+. .+.+...+.|||||++++..... . ..+.+++.
T Consensus 156 G~~l~~~~~~~----~~v~~~~~~~~g~--~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~-~--~~v~v~~~ 222 (365)
T 1jof_A 156 ETYLYSADLTA----NKLWTHRKLASGE--VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA-G--NRICEYVI 222 (365)
T ss_dssp SSEEEEEETTT----TEEEEEEECTTSC--EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT-T--TEEEEEEE
T ss_pred CCEEEEEcCCC----CEEEEEEECCCCC--EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC-C--CeEEEEEE
Confidence 99887664322 3466666621221 00111222 13445667999999987554332 2 25555544
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.05 E-value=0.002 Score=61.38 Aligned_cols=186 Identities=12% Similarity=0.092 Sum_probs=93.8
Q ss_pred EEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|++||+++|+...+ .. ......+..+.|+|||+.++...... .|.+.|+++++..............
T Consensus 46 tV~iWd~~tg~~~~~~~~-------~~~~~~V~~v~~~~~~~~l~sgs~Dg----~v~iw~~~~~~~~~~~~~h~~~~~~ 114 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQM-------EQPGEYISSVAWIKEGNYLAVGTSSA----EVQLWDVQQQKRLRNMTSHSARVGS 114 (318)
T ss_dssp EEEEEETTTCCEEEEEEC-------CSTTCCEEEEEECTTSSEEEEEETTS----EEEEEETTTTEEEEEEECCSSCEEE
T ss_pred EEEEEECCCCCEEEEEEe-------cCCCCeEEEEEECCCCCEEEEEECCC----cEEEeecCCceeEEEecCccceEEE
Confidence 478999999886543 33 23445688899999999877665433 4888899998764433321111110
Q ss_pred ccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
+ ...+ .+++.....+...++...........+......+... .++++++.|+..+ .++. ..+|
T Consensus 115 ----~-------~~~~-~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~s~~-~d~~--i~iw- 177 (318)
T 4ggc_A 115 ----L-------SWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGL-RWAPDGRHLASGG-NDNL--VNVW- 177 (318)
T ss_dssp ----E-------EEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEE-EECTTSSEEEEEE-TTSC--EEEE-
T ss_pred ----e-------ecCC-CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEE-EEcCCCCEEEEEe-cCcc--eeEE-
Confidence 0 0111 2444444444333333222222223333333233333 4788888766544 3432 4554
Q ss_pred EEeCCCCCCCCCCCeEecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 240 AKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
++. .+.............. ......+++++..++...+. .....+.+.+......
T Consensus 178 -d~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~i~lwd~~~~~~ 233 (318)
T 4ggc_A 178 -PSA-PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGAC 233 (318)
T ss_dssp -ESS-CBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEEC-TTTCEEEEEETTTCCE
T ss_pred -ECC-CCcccccceeeecccCCceEEEEecCCCCcEEEEEec-CCCCEEEEEecccccc
Confidence 442 1211101122222222 23445778877666655543 2334666666654443
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.05 E-value=4e-05 Score=75.75 Aligned_cols=186 Identities=11% Similarity=-0.021 Sum_probs=89.6
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCc-eE-EEeccCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP-VS-WMDLQCGGT 102 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~-~~-~~~~~~~~~ 102 (571)
...+.|||||++|+....+ + .+.+||+.+++ .. ...+
T Consensus 58 v~~~~~s~~~~~l~s~s~d-~-----------------------------------~v~vwd~~~~~~~~~~~~~----- 96 (377)
T 3dwl_C 58 VTCVDWAPKSNRIVTCSQD-R-----------------------------------NAYVYEKRPDGTWKQTLVL----- 96 (377)
T ss_dssp EEEEEECTTTCCEEEEETT-S-----------------------------------SEEEC------CCCCEEEC-----
T ss_pred EEEEEEeCCCCEEEEEeCC-C-----------------------------------eEEEEEcCCCCceeeeeEe-----
Confidence 4568899999988765422 1 25778888776 11 1112
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc----eEEEEEeecCCeeeccCCcccCCCCCccCCCe-
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ----RKVILVEELDSWVNLHDCFTPLDKGVTKYSGG- 177 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~----~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~- 177 (571)
......+..+.|+|||+.++...... .|.+.|+++++ .+.+.. .....+. .+ .+++++
T Consensus 97 --~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~-~h~~~v~------~~----~~~~~~~ 159 (377)
T 3dwl_C 97 --LRLNRAATFVRWSPNEDKFAVGSGAR----VISVCYFEQENDWWVSKHLKR-PLRSTIL------SL----DWHPNNV 159 (377)
T ss_dssp --CCCSSCEEEEECCTTSSCCEEEESSS----CEEECCC-----CCCCEEECS-SCCSCEE------EE----EECTTSS
T ss_pred --cccCCceEEEEECCCCCEEEEEecCC----eEEEEEECCcccceeeeEeec-ccCCCeE------EE----EEcCCCC
Confidence 23456788899999999777765433 27778888776 233321 0111110 00 234444
Q ss_pred EEEEEecCCccEEEEEeCC-----------------CceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEE
Q 008274 178 FIWASEKTGFRHLYLHDIN-----------------GTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCA 240 (571)
Q Consensus 178 ~~~~s~~~g~~~l~~~~~~-----------------~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 240 (571)
+++....+|.-.||-+... +.....+ .....+..+ .|+|+|+.|+..+.. + ...+|
T Consensus 160 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~-~~sp~~~~l~~~~~d-~--~i~iw-- 232 (377)
T 3dwl_C 160 LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAV-GFSPSGNALAYAGHD-S--SVTIA-- 232 (377)
T ss_dssp EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEE-EECTTSSCEEEEETT-T--EEC-C--
T ss_pred EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEE-EECCCCCEEEEEeCC-C--cEEEE--
Confidence 5555555665445544311 1111222 222234455 499999977766543 2 24444
Q ss_pred EeCCCCCCCCCCCeEecCCC-ceEEEEECCCCCEEEE
Q 008274 241 KLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVD 276 (571)
Q Consensus 241 ~l~~~g~~~~~~~~~lt~~~-g~~~~~~s~~g~~~v~ 276 (571)
++. .+.........+.... ....+.|+|+|++++.
T Consensus 233 d~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 268 (377)
T 3dwl_C 233 YPS-APEQPPRALITVKLSQLPLRSLLWANESAIVAA 268 (377)
T ss_dssp EEC-STTSCEEECCCEECSSSCEEEEEEEETTEEEEE
T ss_pred ECC-CCCCcceeeEeecCCCCceEEEEEcCCCCEEEE
Confidence 442 2220000022333222 3456689999986644
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.03 E-value=0.0015 Score=61.06 Aligned_cols=183 Identities=12% Similarity=0.074 Sum_probs=98.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|++++++++....+.. ........+++.|++..++++. ... ..|++++.++...+.+......
T Consensus 59 ~I~~~~~~g~~~~~~~~--------~~~~~p~~ia~d~~~~~lyv~d-~~~--~~I~~~~~~g~~~~~~~~~~~~----- 122 (267)
T 1npe_A 59 SIGRASLHGGEPTTIIR--------QDLGSPEGIALDHLGRTIFWTD-SQL--DRIEVAKMDGTQRRVLFDTGLV----- 122 (267)
T ss_dssp EEEEEESSSCCCEEEEC--------TTCCCEEEEEEETTTTEEEEEE-TTT--TEEEEEETTSCSCEEEECSSCS-----
T ss_pred EEEEEecCCCCcEEEEE--------CCCCCccEEEEEecCCeEEEEE-CCC--CEEEEEEcCCCCEEEEEECCCC-----
Confidence 46778888765443321 1123455688999876555543 322 2589999987665544321100
Q ss_pred cCCcccCCCCCccCC-CeEEEEEecC-CccEEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 161 HDCFTPLDKGVTKYS-GGFIWASEKT-GFRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~-d~~~~~s~~~-g~~~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
.|. ....++ ++.+|+++.. ....|++++.++...+.+..... ....+ .++++++.||++.... ..|
T Consensus 123 ----~P~--~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gi-a~d~~~~~lyv~d~~~----~~I 191 (267)
T 1npe_A 123 ----NPR--GIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGL-TFDAFSSQLCWVDAGT----HRA 191 (267)
T ss_dssp ----SEE--EEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEE-EEETTTTEEEEEETTT----TEE
T ss_pred ----Ccc--EEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEE-EEcCCCCEEEEEECCC----CEE
Confidence 010 012234 3555555543 24679999988766554433222 22334 4899999999987654 468
Q ss_pred EEEEeCCCCCCCCCCCeEe-cCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 238 YCAKLYPDWNHTLEAPVKL-TNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~l-t~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
+++++ ++. ..+.+ .....-...+ .++..+.+. .. ....+++++..+++.++.+
T Consensus 192 ~~~~~--~g~----~~~~~~~~~~~P~gi~--~d~~~lyva-~~--~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 192 ECLNP--AQP----GRRKVLEGLQYPFAVT--SYGKNLYYT-DW--KTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp EEEET--TEE----EEEEEEECCCSEEEEE--EETTEEEEE-ET--TTTEEEEEETTTTEEEEEE
T ss_pred EEEec--CCC----ceEEEecCCCCceEEE--EeCCEEEEE-EC--CCCeEEEEeCCCCCceEEE
Confidence 88887 443 22222 2111112223 334454443 22 1237888887666655444
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=3.6e-05 Score=70.36 Aligned_cols=146 Identities=16% Similarity=0.077 Sum_probs=84.4
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeec-cccc---c-cch-------hhhHHHHhCCcEEEE
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVC-DSWI---N-TVD-------MRAQYLRSKGILVWK 388 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~---~-~~~-------~~~~~l~~~G~~v~~ 388 (571)
.+.+....+..+..|.+.... .++..|+|++++|||+..... ..+. + ... .....+ .+-..++.
T Consensus 23 y~~v~~~~~~~lFywf~es~~---~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW-~~~anvlf 98 (255)
T 1whs_A 23 YITVDEGAGRSLFYLLQEAPE---DAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRW-NKVANVLF 98 (255)
T ss_dssp EEEEETTTTEEEEEEEECCCG---GGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCG-GGTSEEEE
T ss_pred EEECCCCCCcEEEEEEEEecC---CCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccc-cccCCEEE
Confidence 355554467788888776543 225679999999999986532 1100 0 000 000011 12367999
Q ss_pred ECC-CCCCCChhhhHHHHhccCC-CCCchhHHHHHHHHHH-cCCCcCCcEEEEeechHHHHHHHHHhc----C--CCeeE
Q 008274 389 LDN-RGTARRGLKFEASIKHNCG-RIDAEDQLTGAEWLIK-QGLAKVGHIGLYGWSYGGYLSAITLAR----F--PDVFQ 459 (571)
Q Consensus 389 ~d~-rG~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~~~~----~--~~~~~ 459 (571)
+|. .|.|.+-..... .....+ ....+|+.++++.+.+ .+.....++.|+|+||||..+-.++.. . .-.++
T Consensus 99 iDqPvGtGfSy~~~~~-~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLk 177 (255)
T 1whs_A 99 LDSPAGVGFSYTNTSS-DIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLK 177 (255)
T ss_dssp ECCSTTSTTCEESSGG-GGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred EecCCCCccCCCcCcc-ccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccc
Confidence 995 577654211110 000000 1124566666655444 344456789999999999998776642 1 23578
Q ss_pred EEEEcCccCCcc
Q 008274 460 CAVSGAPVTSWD 471 (571)
Q Consensus 460 ~~v~~~~~~~~~ 471 (571)
+++.++|+++..
T Consensus 178 Gi~ign~~~d~~ 189 (255)
T 1whs_A 178 GFMVGNGLIDDY 189 (255)
T ss_dssp EEEEEEECCBHH
T ss_pred eEEecCCccCHH
Confidence 999999988754
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=0.00036 Score=80.75 Aligned_cols=204 Identities=17% Similarity=0.121 Sum_probs=116.4
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|||||++||-...+ + .|.+||+.+++.... +
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d-~-----------------------------------~i~vw~~~~~~~~~~-~----- 653 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGAD-K-----------------------------------TLQVFKAETGEKLLD-I----- 653 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETT-S-----------------------------------CEEEEETTTCCEEEE-E-----
T ss_pred ccEEEEEECCCCCEEEEEeCC-C-----------------------------------eEEEEECCCCCEEEE-e-----
Confidence 345678899999999764321 1 368899998875432 2
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWA 181 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~ 181 (571)
......+..+.|+|||++++...... .|.+.|+.+|+.......... .+.. -.|.+ +.+. +++.
T Consensus 654 --~~h~~~v~~~~~s~~~~~l~s~~~d~----~v~vwd~~~~~~~~~~~~~~~-~v~~-~~~~~-------~~~~~~l~s 718 (1249)
T 3sfz_A 654 --KAHEDEVLCCAFSSDDSYIATCSADK----KVKIWDSATGKLVHTYDEHSE-QVNC-CHFTN-------KSNHLLLAT 718 (1249)
T ss_dssp --CCCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTCCEEEEEECCSS-CEEE-EEECS-------SSSCCEEEE
T ss_pred --ccCCCCEEEEEEecCCCEEEEEeCCC----eEEEEECCCCceEEEEcCCCC-cEEE-EEEec-------CCCceEEEE
Confidence 23456788899999999887765433 488899999986544332211 1110 01111 1233 4445
Q ss_pred EecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC--
Q 008274 182 SEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-- 258 (571)
Q Consensus 182 s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-- 258 (571)
...+|. |.++++.+++. ..+......+..+ .|+|+++.|+..+.. + ...+| ++. .+. ....+..
T Consensus 719 g~~d~~--v~vwd~~~~~~~~~~~~h~~~v~~~-~~sp~~~~l~s~s~d-g--~v~vw--d~~-~~~----~~~~~~~~~ 785 (1249)
T 3sfz_A 719 GSNDFF--LKLWDLNQKECRNTMFGHTNSVNHC-RFSPDDELLASCSAD-G--TLRLW--DVR-SAN----ERKSINVKR 785 (1249)
T ss_dssp EETTSC--EEEEETTSSSEEEEECCCSSCEEEE-EECSSTTEEEEEESS-S--EEEEE--EGG-GTE----EEEEEECCC
T ss_pred EeCCCe--EEEEECCCcchhheecCCCCCEEEE-EEecCCCEEEEEECC-C--eEEEE--eCC-CCc----ccceecccc
Confidence 555554 56666666543 3333333345555 499999977766543 2 13333 331 110 0111100
Q ss_pred ------------CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 259 ------------GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 259 ------------~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
......+.++|+|+.++.... ..+.++++.+++....+
T Consensus 786 ~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~-----~~v~~~d~~~~~~~~~~ 835 (1249)
T 3sfz_A 786 FFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK-----NKVLLFDIHTSGLLAEI 835 (1249)
T ss_dssp CC--------CCCCCBCCCCBCTTSSEEEEEET-----TEEEEEETTTCCEEEEE
T ss_pred cccccCCccccccceEEEEEECCCCCEEEEEcC-----CcEEEEEecCCCceeEE
Confidence 011233478999998877642 37888888777665544
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.01 E-value=0.0003 Score=71.14 Aligned_cols=116 Identities=9% Similarity=-0.002 Sum_probs=59.2
Q ss_pred ccCCCe-EEEEEecCCccEEEEEeCC-Cceeec--------eeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE
Q 008274 172 TKYSGG-FIWASEKTGFRHLYLHDIN-GTCLGP--------ITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 172 ~~~~d~-~~~~s~~~g~~~l~~~~~~-~~~~~~--------lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 241 (571)
.+++++ +++.+ .+| .|.++++. +++... +......+..+ .|+|++..+++++..++. ..+| +
T Consensus 184 ~~~~~~~~l~s~-~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~~l~s~~~dg~--i~iw--d 255 (447)
T 3dw8_B 184 SINSDYETYLSA-DDL--RINLWHLEITDRSFNIVDIKPANMEELTEVITAA-EFHPNSCNTFVYSSSKGT--IRLC--D 255 (447)
T ss_dssp EECTTSSEEEEE-CSS--EEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEE-EECSSCTTEEEEEETTSC--EEEE--E
T ss_pred EEcCCCCEEEEe-CCC--eEEEEECCCCCceeeeeecccccccccCcceEEE-EECCCCCcEEEEEeCCCe--EEEE--E
Confidence 345555 44444 444 56667766 222221 22333345555 499998334444444442 4444 5
Q ss_pred eCCCCCCCCCCCeEecCCC-------------ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCC-CceeEec
Q 008274 242 LYPDWNHTLEAPVKLTNGK-------------GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD-GSLVLPL 301 (571)
Q Consensus 242 l~~~g~~~~~~~~~lt~~~-------------g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~-~~~~~~l 301 (571)
+. .+.........+.... ....+.++|+|++++.. +. ..+.+.++.. ++.+..+
T Consensus 256 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~----~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 256 MR-ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR-DY----LSVKVWDLNMENRPVETY 323 (447)
T ss_dssp TT-TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEE-ES----SEEEEEETTCCSSCSCCE
T ss_pred Cc-CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEe-eC----CeEEEEeCCCCcccccee
Confidence 52 1210000133444332 35566999999987643 22 5899999865 5444333
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=98.00 E-value=0.00075 Score=66.72 Aligned_cols=123 Identities=10% Similarity=0.000 Sum_probs=69.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|.+||+.+.....+... ......+..+.|+||++.++...... .|.+.|+.+.....+..+... +.
T Consensus 142 ~i~iwd~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~h~~~--v~- 208 (383)
T 3ei3_B 142 ATTLRDFSGSVIQVFAKT------DSWDYWYCCVDVSVSRQMLATGDSTG----RLLLLGLDGHEIFKEKLHKAK--VT- 208 (383)
T ss_dssp EEEEEETTSCEEEEEECC------CCSSCCEEEEEEETTTTEEEEEETTS----EEEEEETTSCEEEEEECSSSC--EE-
T ss_pred EEEEEECCCCceEEEecc------CCCCCCeEEEEECCCCCEEEEECCCC----CEEEEECCCCEEEEeccCCCc--EE-
Confidence 478899997666555332 12345688899999999777665433 488888854433433322211 11
Q ss_pred cCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeCCC----ceeeceeecCeEEEEEEEEee-cCcEEEEEEc
Q 008274 161 HDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDING----TCLGPITEGDWMVEQIVGVNE-ASGQVYFTGT 228 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~~~----~~~~~lT~~~~~~~~~~~~s~-dg~~l~~~~~ 228 (571)
.+ .+++++ +++....+| .|.++++.. +...........+..+ .|+| +++.|+..+.
T Consensus 209 -----~~----~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 209 -----HA----EFNPRCDWLMATSSVDA--TVKLWDLRNIKDKNSYIAEMPHEKPVNAA-YFNPTDSTKLLTTDQ 271 (383)
T ss_dssp -----EE----EECSSCTTEEEEEETTS--EEEEEEGGGCCSTTCEEEEEECSSCEEEE-EECTTTSCEEEEEES
T ss_pred -----EE----EECCCCCCEEEEEeCCC--EEEEEeCCCCCcccceEEEecCCCceEEE-EEcCCCCCEEEEEcC
Confidence 00 233443 566555555 455566543 2222222233345555 4999 9988776654
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.00 E-value=0.0022 Score=62.20 Aligned_cols=182 Identities=10% Similarity=0.011 Sum_probs=98.4
Q ss_pred EEEEEECCCCc--eEEEeccCCCCCCCCCCceeEEE------EEccCCeEEEEEEeccCccEEEEEEECCCCc-e-EEEE
Q 008274 81 RLGVVSAAGGP--VSWMDLQCGGTDQNYDEEYLARV------NWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ-R-KVIL 150 (571)
Q Consensus 81 ~l~~~dl~~~~--~~~~~~~~~~~~~~~~~~~~~~~------~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~-~-~~l~ 150 (571)
.+.+||+.+++ ...+ ......+..+ +|+||++.++...... .|.+.|+.+++ . ..+.
T Consensus 91 ~i~iwd~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~----~i~vwd~~~~~~~~~~~~ 157 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSV---------KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDG----TVKVWDPRQKDDPVANME 157 (357)
T ss_dssp CEEEECTTSCSSCSEEE---------CCCSSCEEEEEEESGGGCC-CCCEEEEEETTS----CEEEECTTSCSSCSEEEC
T ss_pred eEEEEeCCCCCccEEEE---------EecccceEEEeeccccccCCCccEEEEEeCCC----eEEEEeCCCCCCcceecc
Confidence 36788888765 2222 2234456666 4578998877665433 38888998876 2 2222
Q ss_pred EeecC--CeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEee---cCcEEE
Q 008274 151 VEELD--SWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNE---ASGQVY 224 (571)
Q Consensus 151 ~~~~~--~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~---dg~~l~ 224 (571)
..... ..+.. ..|.+ .+++++ +++....+| .|+++++.+++..........+..+ .|+| +++.|+
T Consensus 158 ~~~~~~~~~v~~-~~~~~-----~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~l~ 228 (357)
T 3i2n_A 158 PVQGENKRDCWT-VAFGN-----AYNQEERVVCAGYDNG--DIKLFDLRNMALRWETNIKNGVCSL-EFDRKDISMNKLV 228 (357)
T ss_dssp CCTTSCCCCEEE-EEEEC-----CCC-CCCEEEEEETTS--EEEEEETTTTEEEEEEECSSCEEEE-EESCSSSSCCEEE
T ss_pred ccCCCCCCceEE-EEEEe-----ccCCCCCEEEEEccCC--eEEEEECccCceeeecCCCCceEEE-EcCCCCCCCCEEE
Confidence 11110 00000 00111 133444 555555544 5788888887765555444455655 4998 888777
Q ss_pred EEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe------cCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 225 FTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL------TNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 225 ~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l------t~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
..+. ++ ...+|.+.. .. ....+ ........+.++|+++.++++.+... .+.+.++..+..
T Consensus 229 ~~~~-dg--~i~i~d~~~--~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~ 294 (357)
T 3i2n_A 229 ATSL-EG--KFHVFDMRT--QH-----PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG---GLHLWKYEYPIQ 294 (357)
T ss_dssp EEES-TT--EEEEEEEEE--EE-----TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS---EEEEEEEECCSC
T ss_pred EECC-CC--eEEEEeCcC--CC-----cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC---cEEEeecCCCcc
Confidence 6654 33 255555443 11 11111 22334556789999985555555432 677777755543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.00 E-value=0.0018 Score=63.45 Aligned_cols=205 Identities=14% Similarity=0.112 Sum_probs=108.3
Q ss_pred cCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCC
Q 008274 22 MDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGG 101 (571)
Q Consensus 22 ~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~ 101 (571)
......+.|||||++||....+ + .|.+||+.++....+..-
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d-g-----------------------------------~i~iw~~~~~~~~~~~~~--- 51 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCSSD-K-----------------------------------TIKIFEVEGETHKLIDTL--- 51 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEETT-S-----------------------------------CEEEEEEETTEEEEEEEE---
T ss_pred cccEEEEEEcCCCCEEEEEECC-C-----------------------------------cEEEEecCCCcceeeeEe---
Confidence 3445678999999998764322 1 257778775443333211
Q ss_pred CCCCCCCceeEEEEEccC--CeEEEEEEeccCccEEEEEEECCCCceEEEEEeec-CCeeeccCCcccCCCCCccCCC--
Q 008274 102 TDQNYDEEYLARVNWMHG--NILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEEL-DSWVNLHDCFTPLDKGVTKYSG-- 176 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspD--g~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~-~~w~~~~~~~~~~~~~~~~~~d-- 176 (571)
......+..+.|+|+ +++++...... .|.+.|+.+++...+..... ...+. .+ .++++
T Consensus 52 ---~~h~~~v~~~~~~~~~~~~~l~s~~~dg----~v~iwd~~~~~~~~~~~~~~~~~~v~------~~----~~~~~~~ 114 (379)
T 3jrp_A 52 ---TGHEGPVWRVDWAHPKFGTILASCSYDG----KVLIWKEENGRWSQIAVHAVHSASVN------SV----QWAPHEY 114 (379)
T ss_dssp ---CCCSSCEEEEEECCGGGCSEEEEEETTS----CEEEEEEETTEEEEEEEECCCSSCEE------EE----EECCGGG
T ss_pred ---cCCCCcEEEEEeCCCCCCCEEEEeccCC----EEEEEEcCCCceeEeeeecCCCcceE------EE----EeCCCCC
Confidence 234567888999987 77777665433 27777888887444433221 11110 00 23333
Q ss_pred e-EEEEEecCCccEEEEEeCCCce---eeceeecCeEEEEEEEEee-------------cCcEEEEEEcCCCCceeEEEE
Q 008274 177 G-FIWASEKTGFRHLYLHDINGTC---LGPITEGDWMVEQIVGVNE-------------ASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 177 ~-~~~~s~~~g~~~l~~~~~~~~~---~~~lT~~~~~~~~~~~~s~-------------dg~~l~~~~~~~~~~~~~l~~ 239 (571)
+ +++....+|. |.++++..+. ...+......+..+. |+| +++.|+..+. ++. ..+|.
T Consensus 115 ~~~l~~~~~d~~--i~v~d~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~--i~i~d 188 (379)
T 3jrp_A 115 GPLLLVASSDGK--VSVVEFKENGTTSPIIIDAHAIGVNSAS-WAPATIEEDGEHNGTKESRKFVTGGA-DNL--VKIWK 188 (379)
T ss_dssp CSEEEEEETTSE--EEEEECCTTSCCCEEEEECCTTCEEEEE-ECCCC----------CTTCEEEEEET-TSC--EEEEE
T ss_pred CCEEEEecCCCc--EEEEecCCCCceeeEEecCCCCceEEEE-EcCccccccccccCCCCCCEEEEEeC-CCe--EEEEE
Confidence 3 5555555554 5555554442 223333333455554 888 5766665554 432 55665
Q ss_pred EEeCCCCCCCCCCCeEecC-CCceEEEEECCC---CCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 240 AKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHN---MRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~---g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
+.. ... .......+.. ........++|+ +++++.. +.. ..+.++++.++
T Consensus 189 ~~~--~~~-~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~-~~d---g~i~iwd~~~~ 241 (379)
T 3jrp_A 189 YNS--DAQ-TYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV-SQD---RTCIIWTQDNE 241 (379)
T ss_dssp EET--TTT-EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE-ETT---SCEEEEEESST
T ss_pred ecC--CCc-ceeeEEEEecccCcEeEEEECCCCCCCCeEEEE-eCC---CEEEEEeCCCC
Confidence 542 211 0001112222 223456689999 6655543 332 25777777554
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=5.7e-05 Score=87.47 Aligned_cols=197 Identities=9% Similarity=0.013 Sum_probs=112.9
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
.....+.|||||++|+....+ ..+.+||+.+++...+
T Consensus 1004 ~~v~~l~~s~dg~~l~s~~~d------------------------------------g~i~vwd~~~~~~~~~------- 1040 (1249)
T 3sfz_A 1004 KAVRHIQFTADGKTLISSSED------------------------------------SVIQVWNWQTGDYVFL------- 1040 (1249)
T ss_dssp SCCCCEEECSSSSCEEEECSS------------------------------------SBEEEEETTTTEEECC-------
T ss_pred CceEEEEECCCCCEEEEEcCC------------------------------------CEEEEEECCCCceEEE-------
Confidence 345678999999988764321 1368899998876533
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWA 181 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~ 181 (571)
......+..+.|+||+++++.. ... .|...|+.+|+.......... .+ .. ..+++++ +++.
T Consensus 1041 --~~~~~~v~~~~~~~~~~l~~~~-~dg----~v~vwd~~~~~~~~~~~~~~~-~v------~~----~~~s~d~~~l~s 1102 (1249)
T 3sfz_A 1041 --QAHQETVKDFRLLQDSRLLSWS-FDG----TVKVWNVITGRIERDFTCHQG-TV------LS----CAISSDATKFSS 1102 (1249)
T ss_dssp --BCCSSCEEEEEECSSSEEEEEE-SSS----EEEEEETTTTCCCEEEECCSS-CC------CC----EEECSSSSSCEE
T ss_pred --ecCCCcEEEEEEcCCCcEEEEE-CCC----cEEEEECCCCceeEEEcccCC-cE------EE----EEECCCCCEEEE
Confidence 2345677889999998754433 222 488999999886543332111 00 00 1234444 4445
Q ss_pred EecCCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe----
Q 008274 182 SEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL---- 256 (571)
Q Consensus 182 s~~~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l---- 256 (571)
...+|. |.+++..+++ ...+......+..+ .|+|||+.|+..+.... ..+| ++. ++. ....+
T Consensus 1103 ~s~d~~--v~iwd~~~~~~~~~l~~h~~~v~~~-~~s~dg~~lat~~~dg~---i~vw--d~~-~~~----~~~~~~~~~ 1169 (1249)
T 3sfz_A 1103 TSADKT--AKIWSFDLLSPLHELKGHNGCVRCS-AFSLDGILLATGDDNGE---IRIW--NVS-DGQ----LLHSCAPIS 1169 (1249)
T ss_dssp ECCSSC--CCEECSSSSSCSBCCCCCSSCEEEE-EECSSSSEEEEEETTSC---CCEE--ESS-SSC----CCCCCCCCC
T ss_pred EcCCCc--EEEEECCCcceeeeeccCCCcEEEE-EECCCCCEEEEEeCCCE---EEEE--ECC-CCc----eEEEecccc
Confidence 555554 4455655443 33444434445555 49999998776654332 4444 442 222 11111
Q ss_pred -----c-CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeE
Q 008274 257 -----T-NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVL 299 (571)
Q Consensus 257 -----t-~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~ 299 (571)
. .......+.|||||++++.. + ..+.+.++.+++.+.
T Consensus 1170 ~~~~~~~~~~~v~~l~fs~dg~~l~s~-~-----g~v~vwd~~~g~~~~ 1212 (1249)
T 3sfz_A 1170 VEEGTATHGGWVTDVCFSPDSKTLVSA-G-----GYLKWWNVATGDSSQ 1212 (1249)
T ss_dssp -------CCSCCCEEEECTTSSCEEEE-S-----SSEEEBCSSSCBCCC
T ss_pred ccccccccCceEEEEEECCCCCEEEEC-C-----CeEEEEECCCCceee
Confidence 1 11224456999999988654 2 368888877766543
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.00 E-value=0.0005 Score=68.29 Aligned_cols=164 Identities=10% Similarity=0.100 Sum_probs=92.9
Q ss_pred CCceeEEEEEcc-CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 107 DEEYLARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 107 ~~~~~~~~~wsp-Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
....+..+.|+| +++.++...... .|.+.|+.+++............. ..+.+. .+++ +++....
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~ 164 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDK----TLKVWDTNTLQTADVFNFEETVYS---HHMSPV------STKHCLVAVGTR 164 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTS----EEEEEETTTTEEEEEEECSSCEEE---EEECSS------CSSCCEEEEEES
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCC----eEEEeeCCCCccceeccCCCceee---eEeecC------CCCCcEEEEEcC
Confidence 456788899999 555666554332 488889999887655543222110 011111 2232 5555555
Q ss_pred CCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe-------
Q 008274 185 TGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL------- 256 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l------- 256 (571)
+| .|+++++.+++ ...+......+..+. |+|+++.+++++..++. ..+| ++..... ....+
T Consensus 165 ~~--~v~~~d~~~~~~~~~~~~~~~~v~~~~-~~~~~~~ll~~~~~dg~--i~i~--d~~~~~~----~~~~~~~~~~~~ 233 (408)
T 4a11_B 165 GP--KVQLCDLKSGSCSHILQGHRQEILAVS-WSPRYDYILATASADSR--VKLW--DVRRASG----CLITLDQHNGKK 233 (408)
T ss_dssp SS--SEEEEESSSSCCCEEECCCCSCEEEEE-ECSSCTTEEEEEETTSC--EEEE--ETTCSSC----CSEECCTTTTCS
T ss_pred CC--eEEEEeCCCcceeeeecCCCCcEEEEE-ECCCCCcEEEEEcCCCc--EEEE--ECCCCCc----cccccccccccc
Confidence 55 46666766554 334443444455554 99999987777776653 4554 4411110 11111
Q ss_pred --------c-CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCcee
Q 008274 257 --------T-NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLV 298 (571)
Q Consensus 257 --------t-~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~ 298 (571)
. .........++|++++++..... ..+.+.++.+++..
T Consensus 234 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~ 280 (408)
T 4a11_B 234 SQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD----NRMRLWNSSNGENT 280 (408)
T ss_dssp CCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCCBC
T ss_pred ceeeccccccccCceeEEEEcCCCCEEEEecCC----CeEEEEECCCCccc
Confidence 1 11234566899999987765433 25888888776653
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=97.98 E-value=0.0022 Score=61.72 Aligned_cols=75 Identities=9% Similarity=0.136 Sum_probs=47.8
Q ss_pred CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCce--EEE-eccC
Q 008274 23 DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPV--SWM-DLQC 99 (571)
Q Consensus 23 ~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~--~~~-~~~~ 99 (571)
.....+.|||||++||....+ + .+.+||+.++.. +.+ .+
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~d-g-----------------------------------~i~iw~~~~~~~~~~~~~~~-- 53 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSD-Q-----------------------------------HIKVFKLDKDTSNWELSDSW-- 53 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETT-S-----------------------------------EEEEEEECSSSCCEEEEEEE--
T ss_pred cceeEEEEcCCCCEEEEeeCC-C-----------------------------------eEEEEECCCCCCcceeccee--
Confidence 345678999999998764322 1 467788876532 111 11
Q ss_pred CCCCCCCCCceeEEEEEcc--CCeEEEEEEeccCccEEEEEEECCCC
Q 008274 100 GGTDQNYDEEYLARVNWMH--GNILTAQVLNRSQTKLKVLKFDIKTG 144 (571)
Q Consensus 100 ~~~~~~~~~~~~~~~~wsp--Dg~~i~~~~~r~~~~~~i~~~d~~~g 144 (571)
......+..+.|+| |++.++....... |.+.|+.++
T Consensus 54 -----~~~~~~v~~~~~~~~~d~~~l~s~~~dg~----v~vwd~~~~ 91 (351)
T 3f3f_A 54 -----RAHDSSIVAIDWASPEYGRIIASASYDKT----VKLWEEDPD 91 (351)
T ss_dssp -----ECCSSCEEEEEECCGGGCSEEEEEETTSC----EEEEEECTT
T ss_pred -----ccCCCcEEEEEEcCCCCCCEEEEEcCCCe----EEEEecCCC
Confidence 23456788899999 6887776654332 666666665
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=97.98 E-value=0.0023 Score=62.65 Aligned_cols=164 Identities=11% Similarity=0.073 Sum_probs=90.1
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC-eEEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG-GFIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d-~~~~~s~~~ 185 (571)
....+..+.|+||++.++..+... .|.+.|+++++...........-.. -.+.+ +++ .+++....+
T Consensus 153 h~~~v~~~~~~~~~~~l~t~s~D~----~v~lwd~~~~~~~~~~~~h~~~v~~--~~~~~-------~~~g~~l~sgs~D 219 (354)
T 2pbi_B 153 HTNYLSACSFTNSDMQILTASGDG----TCALWDVESGQLLQSFHGHGADVLC--LDLAP-------SETGNTFVSGGCD 219 (354)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTS----EEEEEETTTCCEEEEEECCSSCEEE--EEECC-------CSSCCEEEEEETT
T ss_pred cCCcEEEEEEeCCCCEEEEEeCCC----cEEEEeCCCCeEEEEEcCCCCCeEE--EEEEe-------CCCCCEEEEEeCC
Confidence 345678899999998777665433 4888899998865433321111000 00111 223 355555555
Q ss_pred CccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC---Cc
Q 008274 186 GFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG---KG 261 (571)
Q Consensus 186 g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~---~g 261 (571)
| .|.++|+.+++. ..+......+..+ .|+|+++.|+..+. ++. ..+| ++ .... ....+... .+
T Consensus 220 g--~v~~wd~~~~~~~~~~~~h~~~v~~v-~~~p~~~~l~s~s~-D~~--v~lw--d~--~~~~---~~~~~~~~~~~~~ 286 (354)
T 2pbi_B 220 K--KAMVWDMRSGQCVQAFETHESDVNSV-RYYPSGDAFASGSD-DAT--CRLY--DL--RADR---EVAIYSKESIIFG 286 (354)
T ss_dssp S--CEEEEETTTCCEEEEECCCSSCEEEE-EECTTSSEEEEEET-TSC--EEEE--ET--TTTE---EEEEECCTTCCSC
T ss_pred C--eEEEEECCCCcEEEEecCCCCCeEEE-EEeCCCCEEEEEeC-CCe--EEEE--EC--CCCc---EEEEEcCCCcccc
Confidence 5 366667665543 3343334445555 49999987665543 332 4444 44 2110 12222221 13
Q ss_pred eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 262 KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 262 ~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
...+.++|+|++++..... ..+.+.++.+++.+..
T Consensus 287 ~~~~~~s~~g~~l~~g~~d----~~i~vwd~~~~~~~~~ 321 (354)
T 2pbi_B 287 ASSVDFSLSGRLLFAGYND----YTINVWDVLKGSRVSI 321 (354)
T ss_dssp EEEEEECTTSSEEEEEETT----SCEEEEETTTCSEEEE
T ss_pred eeEEEEeCCCCEEEEEECC----CcEEEEECCCCceEEE
Confidence 4566899999877654432 3678888766665443
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00058 Score=66.44 Aligned_cols=182 Identities=10% Similarity=0.011 Sum_probs=96.1
Q ss_pred EEEEECCCCc--eEEEeccCCCCCCCCCCceeEEEE----EccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC
Q 008274 82 LGVVSAAGGP--VSWMDLQCGGTDQNYDEEYLARVN----WMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD 155 (571)
Q Consensus 82 l~~~dl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~ 155 (571)
+.+||+.+++ ...+.... ......+..+. |+||++.++...... .|...|+.+++..........
T Consensus 141 i~vwd~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~ 211 (357)
T 3i2n_A 141 VKVWDPRQKDDPVANMEPVQ-----GENKRDCWTVAFGNAYNQEERVVCAGYDNG----DIKLFDLRNMALRWETNIKNG 211 (357)
T ss_dssp EEEECTTSCSSCSEEECCCT-----TSCCCCEEEEEEECCCC-CCCEEEEEETTS----EEEEEETTTTEEEEEEECSSC
T ss_pred EEEEeCCCCCCcceeccccC-----CCCCCceEEEEEEeccCCCCCEEEEEccCC----eEEEEECccCceeeecCCCCc
Confidence 6788888765 23332210 01122455555 889999777765433 489999999987544332221
Q ss_pred CeeeccCCcccCCCCCccCC---C-eEEEEEecCCccEEEEEeCCCceee-ce-----eecCeEEEEEEEEeecCcEEEE
Q 008274 156 SWVNLHDCFTPLDKGVTKYS---G-GFIWASEKTGFRHLYLHDINGTCLG-PI-----TEGDWMVEQIVGVNEASGQVYF 225 (571)
Q Consensus 156 ~w~~~~~~~~~~~~~~~~~~---d-~~~~~s~~~g~~~l~~~~~~~~~~~-~l-----T~~~~~~~~~~~~s~dg~~l~~ 225 (571)
+.. . .+++ + .+++....+|. |+++++.+++.. .+ ......+..+ .|+|+++.+++
T Consensus 212 --v~~---~-------~~~~~~~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~ 276 (357)
T 3i2n_A 212 --VCS---L-------EFDRKDISMNKLVATSLEGK--FHVFDMRTQHPTKGFASVSEKAHKSTVWQV-RHLPQNRELFL 276 (357)
T ss_dssp --EEE---E-------EESCSSSSCCEEEEEESTTE--EEEEEEEEEETTTEEEEEEEECCSSCEEEE-EEETTEEEEEE
T ss_pred --eEE---E-------EcCCCCCCCCEEEEECCCCe--EEEEeCcCCCcccceeeeccCCCcCCEEEE-EECCCCCcEEE
Confidence 110 0 1232 3 35555555564 445554333211 11 1233345555 49999987777
Q ss_pred EEcCCCCceeEEEEEEeCCCCCCC--------------CCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEE
Q 008274 226 TGTLDGPLESHLYCAKLYPDWNHT--------------LEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLC 290 (571)
Q Consensus 226 ~~~~~~~~~~~l~~~~l~~~g~~~--------------~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~ 290 (571)
++..++ ...+|.+.. ..... ......+.. ......+.|+|+|++++++.+.. ..+.+.
T Consensus 277 ~~~~dg--~i~iwd~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d---~~i~iw 349 (357)
T 3i2n_A 277 TAGGAG--GLHLWKYEY--PIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFD---QTVRVL 349 (357)
T ss_dssp EEETTS--EEEEEEEEC--CSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETT---SEEEEE
T ss_pred EEeCCC--cEEEeecCC--CcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCC---CcEEEE
Confidence 777665 367776653 11100 001112222 22345568999999887665543 267777
Q ss_pred EcCC
Q 008274 291 SLQD 294 (571)
Q Consensus 291 ~~~~ 294 (571)
++.+
T Consensus 350 ~~~~ 353 (357)
T 3i2n_A 350 IVTK 353 (357)
T ss_dssp EECC
T ss_pred ECCC
Confidence 7643
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=97.93 E-value=0.002 Score=61.97 Aligned_cols=164 Identities=12% Similarity=0.132 Sum_probs=87.9
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~ 185 (571)
....+..+.|+|||++++...... .|.+.|+++|+........... +. .+ .+++++ +++....+
T Consensus 64 h~~~v~~~~~s~dg~~l~s~s~D~----~v~~wd~~~~~~~~~~~~h~~~-v~------~~----~~~~~~~~l~s~s~D 128 (319)
T 3frx_A 64 HSHIVQDCTLTADGAYALSASWDK----TLRLWDVATGETYQRFVGHKSD-VM------SV----DIDKKASMIISGSRD 128 (319)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTTEEEEEEECCSSC-EE------EE----EECTTSCEEEEEETT
T ss_pred CcccEEEEEECCCCCEEEEEeCCC----EEEEEECCCCCeeEEEccCCCc-EE------EE----EEcCCCCEEEEEeCC
Confidence 455778899999999877765433 3888899999764433221111 10 00 223444 55555566
Q ss_pred CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCc-----EEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC-C
Q 008274 186 GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASG-----QVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-G 259 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~-----~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-~ 259 (571)
|. |.+++..+.....+......+... .++|.++ .+++++..++. ..+| ++. .+. ....+.. .
T Consensus 129 ~~--i~vwd~~~~~~~~~~~h~~~v~~~-~~~~~~~~~~~~~~l~s~~~d~~--i~~w--d~~-~~~----~~~~~~~h~ 196 (319)
T 3frx_A 129 KT--IKVWTIKGQCLATLLGHNDWVSQV-RVVPNEKADDDSVTIISAGNDKM--VKAW--NLN-QFQ----IEADFIGHN 196 (319)
T ss_dssp SC--EEEEETTSCEEEEECCCSSCEEEE-EECCC------CCEEEEEETTSC--EEEE--ETT-TTE----EEEEECCCC
T ss_pred Ce--EEEEECCCCeEEEEeccCCcEEEE-EEccCCCCCCCccEEEEEeCCCE--EEEE--ECC-cch----hheeecCCC
Confidence 64 444566665555554433334443 3655332 24444444442 4444 441 111 1222322 2
Q ss_pred CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 260 KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 260 ~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.....+.++|+|++++..... ..+.+.++.+++.+..+
T Consensus 197 ~~v~~~~~sp~g~~l~s~~~d----g~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 197 SNINTLTASPDGTLIASAGKD----GEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETT----CEEEEEETTTTEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCcEEEEe
Confidence 334566899999977654322 37888888766654444
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=97.92 E-value=0.001 Score=66.66 Aligned_cols=121 Identities=11% Similarity=0.097 Sum_probs=69.0
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
|.+||+.+++.... + ......+..+.|+|||++++....... |.+.|+.++++......... .+.
T Consensus 132 i~vwd~~~~~~~~~-l-------~~h~~~V~~v~~~~~~~~l~sgs~D~~----i~iwd~~~~~~~~~~~~h~~-~V~-- 196 (410)
T 1vyh_C 132 IKVWDYETGDFERT-L-------KGHTDSVQDISFDHSGKLLASCSADMT----IKLWDFQGFECIRTMHGHDH-NVS-- 196 (410)
T ss_dssp EEEEETTTCCCCEE-E-------CCCSSCEEEEEECTTSSEEEEEETTSC----CCEEETTSSCEEECCCCCSS-CEE--
T ss_pred EEEEECCCCcEEEE-E-------eccCCcEEEEEEcCCCCEEEEEeCCCe----EEEEeCCCCceeEEEcCCCC-CEE--
Confidence 68899998765432 2 234567888999999997776654432 67778888775432211111 010
Q ss_pred CCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 162 DCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 162 ~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
.+ .+++++ +++....+| .|.++++.++. ...++.....+... .++++|+.|+..+.
T Consensus 197 ----~v----~~~p~~~~l~s~s~D~--~i~~wd~~~~~~~~~~~~h~~~v~~~-~~~~~g~~l~s~s~ 254 (410)
T 1vyh_C 197 ----SV----SIMPNGDHIVSASRDK--TIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSN 254 (410)
T ss_dssp ----EE----EECSSSSEEEEEETTS--EEEEEETTTCCEEEEEECCSSCEEEE-EECTTSSEEEEEET
T ss_pred ----EE----EEeCCCCEEEEEeCCC--eEEEEECCCCcEEEEEeCCCccEEEE-EECCCCCEEEEEcC
Confidence 00 233443 555555555 46666765554 34444433334444 48899986665554
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.91 E-value=2e-05 Score=80.76 Aligned_cols=143 Identities=11% Similarity=0.121 Sum_probs=80.1
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCce--------EEEe
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPV--------SWMD 96 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~--------~~~~ 96 (571)
...++|||||++||-...+ + .|.+||+.+++. ..+.
T Consensus 132 v~svafSPDG~~LAsgs~D-G-----------------------------------tVkIWd~~~~~l~~~~~i~l~ti~ 175 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNED-G-----------------------------------ELQFFSIRKNSENTPEFYFESSIR 175 (588)
T ss_dssp EEEEEECSSSSCEEEEETT-S-----------------------------------EEEEEECCCCTTTCCCCEEEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCC-C-----------------------------------EEEEEECCCCccccccceeeeeee
Confidence 4579999999999775432 1 467889888752 2222
Q ss_pred ccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE----EEEEeecCCeeeccCCcccCCCCCc
Q 008274 97 LQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK----VILVEELDSWVNLHDCFTPLDKGVT 172 (571)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~----~l~~~~~~~w~~~~~~~~~~~~~~~ 172 (571)
... .+....+..++||||| ++.... ++ .|++.|+++++.. .|...... .+ .. ..
T Consensus 176 ~~~-----~gh~~~V~sVawSPdg--Laass~-D~---tVrlWd~~~~~~~~~~~tL~~~h~~-~V------~s----va 233 (588)
T 2j04_A 176 LSD-----AGSKDWVTHIVWYEDV--LVAALS-NN---SVFSMTVSASSHQPVSRMIQNASRR-KI------TD----LK 233 (588)
T ss_dssp CSC-----TTCCCCEEEEEEETTE--EEEEET-TC---CEEEECCCSSSSCCCEEEEECCCSS-CC------CC----EE
T ss_pred ccc-----ccccccEEEEEEcCCc--EEEEeC-CC---eEEEEECCCCccccceeeecccccC-cE------EE----EE
Confidence 110 1223468889999999 433332 21 2888888887742 23111110 00 00 12
Q ss_pred cCCCeEEEEEecCCccEEEEEeCCCceeeceeec-CeEEEEEEEE--eecCcEEEEEEcCCC
Q 008274 173 KYSGGFIWASEKTGFRHLYLHDINGTCLGPITEG-DWMVEQIVGV--NEASGQVYFTGTLDG 231 (571)
Q Consensus 173 ~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~-~~~~~~~~~~--s~dg~~l~~~~~~~~ 231 (571)
|+ +..+..+. ...|.+++..+++...+..+ .-.+.++ .+ +||+. .+.++.+++
T Consensus 234 Fs-g~~LASa~---~~tIkLWd~~~~~~~~~~~gh~~~V~~v-a~~~s~d~~-~La~a~edG 289 (588)
T 2j04_A 234 IV-DYKVVLTC---PGYVHKIDLKNYSISSLKTGSLENFHII-PLNHEKEST-ILLMSNKTS 289 (588)
T ss_dssp EE-TTEEEEEC---SSEEEEEETTTTEEEEEECSCCSCCCEE-EETTCSSCE-EEEECSSCE
T ss_pred EE-CCEEEEEe---CCeEEEEECCCCeEEEEEcCCCceEEEE-EeeeCCCCC-EEEEEcCCC
Confidence 33 34444442 25888999888877444433 2234444 48 88884 444444444
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=97.90 E-value=0.0013 Score=65.26 Aligned_cols=187 Identities=6% Similarity=-0.019 Sum_probs=99.4
Q ss_pred EEEEECCCCc------eEEEeccCCCCCCCCC--CceeEEEEEc----cCCeE-EEEEEeccCccEEEEEEECCC-----
Q 008274 82 LGVVSAAGGP------VSWMDLQCGGTDQNYD--EEYLARVNWM----HGNIL-TAQVLNRSQTKLKVLKFDIKT----- 143 (571)
Q Consensus 82 l~~~dl~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~ws----pDg~~-i~~~~~r~~~~~~i~~~d~~~----- 143 (571)
|.+||+.+++ ...+... ... ...+..+.|+ ||++. ++...... .|++.|+.+
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLL------DSDMKKHSFWALKWGASNDRLLSHRLVATDVKG----TTYIWKFHPFADES 162 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCS------CTTGGGSCEEEEEEECCC----CEEEEEEETTS----CEEEEEEESSSSHH
T ss_pred EEEEEccCCcccccccceeeccc------ccccCCCcEEEEEEeeccCCCCceEEEEEeCCC----cEEEEeCCcccccc
Confidence 5778887766 3333211 000 3678889999 99997 66654333 266666665
Q ss_pred -Cce-E-----EEEE-----eecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCcee-eceee---c-
Q 008274 144 -GQR-K-----VILV-----EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITE---G- 206 (571)
Q Consensus 144 -g~~-~-----~l~~-----~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~---~- 206 (571)
++. + .+.. ......+ .. ..++++++++....+| .|+++++..++. ..+.. .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i------~~----~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~h~ 230 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFA------TS----VDISERGLIATGFNNG--TVQISELSTLRPLYNFESQHSMI 230 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCC------CE----EEECTTSEEEEECTTS--EEEEEETTTTEEEEEEECCC---
T ss_pred ccceeeccCcceeeeeeccccCCCCCc------eE----EEECCCceEEEEeCCC--cEEEEECCCCceeEEEecccccc
Confidence 332 1 2221 0001000 00 1345555444444444 577778766554 33333 2
Q ss_pred --CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC--------------CCceEEEEECCC
Q 008274 207 --DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN--------------GKGKHVAVLDHN 270 (571)
Q Consensus 207 --~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~--------------~~g~~~~~~s~~ 270 (571)
...+..+ .|+|+++.|+..+.... ...|..+++. .+. ....+.. ......+.++|+
T Consensus 231 ~~~~~i~~i-~~~~~~~~l~~~~~d~~--~g~i~i~d~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 302 (397)
T 1sq9_A 231 NNSNSIRSV-KFSPQGSLLAIAHDSNS--FGCITLYETE-FGE----RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS 302 (397)
T ss_dssp CCCCCEEEE-EECSSTTEEEEEEEETT--EEEEEEEETT-TCC----EEEEECBC--------CCBSBSSCEEEEEECSS
T ss_pred ccCCccceE-EECCCCCEEEEEecCCC--CceEEEEECC-CCc----ccceeccCcccccccccccccCCcEEEEEECCC
Confidence 4445555 49999998877664422 1456666762 221 2333332 233456689999
Q ss_pred CCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 271 MRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 271 g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
+++++..... ..+.++++.+++.+..+.
T Consensus 303 ~~~l~~~~~d----g~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 303 GETLCSAGWD----GKLRFWDVKTKERITTLN 330 (397)
T ss_dssp SSEEEEEETT----SEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEeCC----CeEEEEEcCCCceeEEEe
Confidence 9987654322 378899987777655554
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00076 Score=72.75 Aligned_cols=182 Identities=14% Similarity=0.091 Sum_probs=100.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeec--CCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEEL--DSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~--~~w~ 158 (571)
.|.+||+.+++.... + ......+..+.|+|||+.++..+... .|.+.|..+.....+..... ..++
T Consensus 453 ~v~vwd~~~~~~~~~-~-------~~h~~~v~~~~~s~~~~~l~s~s~D~----~i~iwd~~~~~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRR-F-------VGHTKDVLSVAFSLDNRQIVSASRDR----TIKLWNTLGECKYTISEGGEGHRDWV 520 (694)
T ss_dssp EEEEEETTTTEEEEE-E-------ECCSSCEEEEEECTTSSCEEEEETTS----CEEEECTTSCEEEEECSSTTSCSSCE
T ss_pred cEEEEECCCCcceeE-E-------eCCCCCEEEEEEeCCCCEEEEEeCCC----EEEEEECCCCcceeeccCCCCCCCcE
Confidence 478899998865433 1 23456788899999999777665433 26667776554333321111 1122
Q ss_pred eccCCcccCCCCCccCCC---eEEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCce
Q 008274 159 NLHDCFTPLDKGVTKYSG---GFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLE 234 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d---~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 234 (571)
.. . .++++ ..++....+|. |.++++.+.+. ..+......+..+ .|+|+|+.|+..+. ++.
T Consensus 521 ~~---~-------~~~~~~~~~~l~s~s~d~~--v~vwd~~~~~~~~~~~~h~~~v~~v-~~spdg~~l~sg~~-Dg~-- 584 (694)
T 3dm0_A 521 SC---V-------RFSPNTLQPTIVSASWDKT--VKVWNLSNCKLRSTLAGHTGYVSTV-AVSPDGSLCASGGK-DGV-- 584 (694)
T ss_dssp EE---E-------EECSCSSSCEEEEEETTSC--EEEEETTTCCEEEEECCCSSCEEEE-EECTTSSEEEEEET-TSB--
T ss_pred EE---E-------EEeCCCCcceEEEEeCCCe--EEEEECCCCcEEEEEcCCCCCEEEE-EEeCCCCEEEEEeC-CCe--
Confidence 11 0 12232 24555555554 55666665543 3344334345555 49999987665554 332
Q ss_pred eEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 235 SHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 235 ~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
..+| ++. .+. ....+........+.++|++..++.... ..+.+.++.+++.+..+.
T Consensus 585 i~iw--d~~-~~~----~~~~~~~~~~v~~~~~sp~~~~l~~~~~-----~~i~iwd~~~~~~~~~~~ 640 (694)
T 3dm0_A 585 VLLW--DLA-EGK----KLYSLEANSVIHALCFSPNRYWLCAATE-----HGIKIWDLESKSIVEDLK 640 (694)
T ss_dssp CEEE--ETT-TTE----EEECCBCSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEEEEEEC
T ss_pred EEEE--ECC-CCc----eEEEecCCCcEEEEEEcCCCcEEEEEcC-----CCEEEEECCCCCChhhhc
Confidence 4444 452 221 2222333334556689999987655432 258888987776655443
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00043 Score=67.07 Aligned_cols=193 Identities=11% Similarity=-0.008 Sum_probs=105.4
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCc----eEEEeccC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGP----VSWMDLQC 99 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~----~~~~~~~~ 99 (571)
....+.|||||+.|+....+ ..|.+||+.+++ .+.+.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d------------------------------------~~v~iw~~~~~~~~~~~~~~~--- 53 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWD------------------------------------GSLTVYKFDIQAKNVDLLQSL--- 53 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETT------------------------------------SEEEEEEEETTTTEEEEEEEE---
T ss_pred cEEEEEEcCCCCEEEEEcCC------------------------------------CeEEEEEeCCCCccccceeee---
Confidence 34678899999998775422 146788888766 33332
Q ss_pred CCCCCCCCCceeEEEEEccCCe-EEEEEEeccCccEEEEEEEC-CCCceEEEEE--eecCCeeeccCCcccCCCCCccCC
Q 008274 100 GGTDQNYDEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDI-KTGQRKVILV--EELDSWVNLHDCFTPLDKGVTKYS 175 (571)
Q Consensus 100 ~~~~~~~~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~-~~g~~~~l~~--~~~~~w~~~~~~~~~~~~~~~~~~ 175 (571)
.....+..+.|+|||+ .++...... .|.+.|+ ++++...+.. +... +. .+ .+++
T Consensus 54 ------~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~~wd~~~~~~~~~~~~~~~~~~--v~------~l----~~~~ 111 (342)
T 1yfq_A 54 ------RYKHPLLCCNFIDNTDLQIYVGTVQG----EILKVDLIGSPSFQALTNNEANLG--IC------RI----CKYG 111 (342)
T ss_dssp ------ECSSCEEEEEEEESSSEEEEEEETTS----CEEEECSSSSSSEEECBSCCCCSC--EE------EE----EEET
T ss_pred ------ecCCceEEEEECCCCCcEEEEEcCCC----eEEEEEeccCCceEeccccCCCCc--eE------EE----EeCC
Confidence 2455788899999999 777665433 3888999 8887755432 2111 10 00 2233
Q ss_pred CeEEEEEecCCccEEEEEeCCC---------ce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCC
Q 008274 176 GGFIWASEKTGFRHLYLHDING---------TC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPD 245 (571)
Q Consensus 176 d~~~~~s~~~g~~~l~~~~~~~---------~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~ 245 (571)
+.+++....+| .|.++++.+ ++ ...+. ....+..+ .|++++ ++++..++ .|+.+++...
T Consensus 112 ~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~-~~~~~~---l~~~~~d~----~i~i~d~~~~ 180 (342)
T 1yfq_A 112 DDKLIAASWDG--LIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTM-DTNSSR---LIVGMNNS----QVQWFRLPLC 180 (342)
T ss_dssp TTEEEEEETTS--EEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEE-EECSSE---EEEEESTT----EEEEEESSCC
T ss_pred CCEEEEEcCCC--eEEEEcccccccccccccCCeeeEEe-eCCceEEE-EecCCc---EEEEeCCC----eEEEEECCcc
Confidence 34555555555 455555443 32 22233 23334444 377765 44444343 4555566210
Q ss_pred CCCCCCCCeEe--cCCCceEEEEECC-CCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 246 WNHTLEAPVKL--TNGKGKHVAVLDH-NMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 246 g~~~~~~~~~l--t~~~g~~~~~~s~-~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
+.. ..... ........+.++| ++++++..... ..+.+.++...
T Consensus 181 ~~~---~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d----g~i~i~~~~~~ 226 (342)
T 1yfq_A 181 EDD---NGTIEESGLKYQIRDVALLPKEQEGYACSSID----GRVAVEFFDDQ 226 (342)
T ss_dssp TTC---CCEEEECSCSSCEEEEEECSGGGCEEEEEETT----SEEEEEECCTT
T ss_pred ccc---cceeeecCCCCceeEEEECCCCCCEEEEEecC----CcEEEEEEcCC
Confidence 210 11122 2222345568999 99877664432 35666665433
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.0022 Score=64.09 Aligned_cols=179 Identities=11% Similarity=0.001 Sum_probs=97.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE-EEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK-VILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~-~l~~~~~~~w~~ 159 (571)
.|+++|+++++.+.+... ..... ++|+|||+.++...... +. .|++++.+++... .+.......
T Consensus 153 ~I~~id~~~g~~~~~~~~---------~~~~~-ia~~~~g~~l~~~d~~~-~~-~I~~~d~~~~~~~~~~g~~~~~~--- 217 (409)
T 3hrp_A 153 RVRLISVDDNKVTTVHPG---------FKGGK-PAVTKDKQRVYSIGWEG-TH-TVYVYMKASGWAPTRIGQLGSTF--- 217 (409)
T ss_dssp EEEEEETTTTEEEEEEET---------CCBCB-CEECTTSSEEEEEBSST-TC-EEEEEEGGGTTCEEEEEECCTTS---
T ss_pred cEEEEECCCCEEEEeecc---------CCCCc-eeEecCCCcEEEEecCC-Cc-eEEEEEcCCCceeEEeeeccchh---
Confidence 578889988877655321 11222 78999998665553322 21 6999999887653 231111100
Q ss_pred ccCCcccCCCCCccCC-CeEEEEEecCCccEEEEEeCCCceeece----eecCeEEE---EEEEEeecCcEEEEEEcCCC
Q 008274 160 LHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPI----TEGDWMVE---QIVGVNEASGQVYFTGTLDG 231 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~~l~~~~~~~~~~~~l----T~~~~~~~---~~~~~s~dg~~l~~~~~~~~ 231 (571)
+.. ......++ ++.+++++.. ..|++++.+++..+.+ ..+..... .+ .++|+++.||++....
T Consensus 218 ----~~~-p~~iav~p~~g~lyv~d~~--~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~i-a~~p~~g~lyv~d~~~- 288 (409)
T 3hrp_A 218 ----SGK-IGAVALDETEEWLYFVDSN--KNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYL-IYYFVDSNFYMSDQNL- 288 (409)
T ss_dssp ----CSC-CCBCEECTTSSEEEEECTT--CEEEEEETTTCCEEEEEECCCCSCCCCSSCCEE-EEETTTTEEEEEETTT-
T ss_pred ----cCC-cEEEEEeCCCCeEEEEECC--CcEEEEECCCCCEEEEecccccCCCCCCccccE-EEeCCCCEEEEEeCCC-
Confidence 000 01112344 4544445553 3799999887765544 22211111 34 4899888898886543
Q ss_pred CceeEEEEEEeCCCCCCCCCCCeEecCC----------------CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 232 PLESHLYCAKLYPDWNHTLEAPVKLTNG----------------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 232 ~~~~~l~~~~l~~~g~~~~~~~~~lt~~----------------~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
..|++++. ++. ...+... ..-....++++|+ + |+.... .-..|.++++.++
T Consensus 289 ---~~I~~~~~--~g~-----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-l-yvad~~-~~~~I~~~~~~~G 355 (409)
T 3hrp_A 289 ---SSVYKITP--DGE-----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-F-YIVDGF-KGYCLRKLDILDG 355 (409)
T ss_dssp ---TEEEEECT--TCC-----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-E-EEEETT-TTCEEEEEETTTT
T ss_pred ---CEEEEEec--CCC-----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-E-EEEeCC-CCCEEEEEECCCC
Confidence 45777776 442 1111110 1134568899987 3 333330 2247888886566
Q ss_pred c
Q 008274 296 S 296 (571)
Q Consensus 296 ~ 296 (571)
.
T Consensus 356 ~ 356 (409)
T 3hrp_A 356 Y 356 (409)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00029 Score=72.17 Aligned_cols=137 Identities=11% Similarity=0.116 Sum_probs=74.4
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce--------EEEEEeec--CCeeeccCCcccCCCCCccCCCeEE
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR--------KVILVEEL--DSWVNLHDCFTPLDKGVTKYSGGFI 179 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~--------~~l~~~~~--~~w~~~~~~~~~~~~~~~~~~d~~~ 179 (571)
.+..++|||||++|+.....+ .|-+.|+.++.. ..+..... ..|+.. .+|+||+ +
T Consensus 131 sv~svafSPDG~~LAsgs~DG----tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~s----------VawSPdg-L 195 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDG----ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTH----------IVWYEDV-L 195 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTS----EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEE----------EEEETTE-E
T ss_pred cEEEEEEcCCCCEEEEEcCCC----EEEEEECCCCccccccceeeeeeecccccccccEEE----------EEEcCCc-E
Confidence 467899999999888876544 377778888752 22221111 134432 1467888 5
Q ss_pred EEEecCCccEEEEEeCCCceee----cee-ecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCe
Q 008274 180 WASEKTGFRHLYLHDINGTCLG----PIT-EGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPV 254 (571)
Q Consensus 180 ~~s~~~g~~~l~~~~~~~~~~~----~lT-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~ 254 (571)
..+..++ .+++++++++... .|. .....+..+. |+ |+.|...+ + ..+...++ .+. ...
T Consensus 196 aass~D~--tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva-Fs--g~~LASa~--~----~tIkLWd~--~~~----~~~ 258 (588)
T 2j04_A 196 VAALSNN--SVFSMTVSASSHQPVSRMIQNASRRKITDLK-IV--DYKVVLTC--P----GYVHKIDL--KNY----SIS 258 (588)
T ss_dssp EEEETTC--CEEEECCCSSSSCCCEEEEECCCSSCCCCEE-EE--TTEEEEEC--S----SEEEEEET--TTT----EEE
T ss_pred EEEeCCC--eEEEEECCCCccccceeeecccccCcEEEEE-EE--CCEEEEEe--C----CeEEEEEC--CCC----eEE
Confidence 4444443 3566666665532 242 2234455554 77 56555553 2 23444455 332 221
Q ss_pred Eec--CCCceEEEEE--CCCCCEEEEEe
Q 008274 255 KLT--NGKGKHVAVL--DHNMRNFVDFH 278 (571)
Q Consensus 255 ~lt--~~~g~~~~~~--s~~g~~~v~~~ 278 (571)
.+. .......+.+ |||+..++...
T Consensus 259 ~~~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 259 SLKTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp EEECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred EEEcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 222 2233456789 99987665544
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00084 Score=74.57 Aligned_cols=196 Identities=9% Similarity=0.095 Sum_probs=111.0
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...++|||||+.||-...+ + .|++||..+++.... .
T Consensus 20 V~~lafspdg~~lAsgs~D-g-----------------------------------~I~lw~~~~~~~~~~-~------- 55 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATVT-G-----------------------------------EVHIYGQQQVEVVIK-L------- 55 (902)
T ss_dssp EEEEEEETTTTEEEEEETT-S-----------------------------------EEEEECSTTCEEEEE-C-------
T ss_pred cEEEEECCCCCEEEEEeCC-C-----------------------------------EEEEEeCCCcEEEEE-c-------
Confidence 4578999999999875432 1 367788877654322 2
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEe
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASE 183 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~ 183 (571)
.....+..+.|+| |++++...... .|.+.|+++++......... .+. .+ .+++++ +++...
T Consensus 56 -~~~~~V~~l~fsp-g~~L~S~s~D~----~v~lWd~~~~~~~~~~~~~~--~V~------~v----~~sp~g~~l~sgs 117 (902)
T 2oaj_A 56 -EDRSAIKEMRFVK-GIYLVVINAKD----TVYVLSLYSQKVLTTVFVPG--KIT------SI----DTDASLDWMLIGL 117 (902)
T ss_dssp -SSCCCEEEEEEET-TTEEEEEETTC----EEEEEETTTCSEEEEEECSS--CEE------EE----ECCTTCSEEEEEE
T ss_pred -CCCCCEEEEEEcC-CCEEEEEECcC----eEEEEECCCCcEEEEEcCCC--CEE------EE----EECCCCCEEEEEc
Confidence 2345688899999 77666554322 48888999987643332211 111 00 234444 555555
Q ss_pred cCCccEEEEEeCCCceeece------------eecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCC
Q 008274 184 KTGFRHLYLHDINGTCLGPI------------TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE 251 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~l------------T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~ 251 (571)
.+| .|.++++.+++.... ....-.+..+ .|+|++..+++++..++. . + .++. .+.
T Consensus 118 ~dg--~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl-~~sp~~~~~l~~g~~dg~--v-l--Wd~~-~~~---- 184 (902)
T 2oaj_A 118 QNG--SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSI-QWNPRDIGTVLISYEYVT--L-T--YSLV-ENE---- 184 (902)
T ss_dssp TTS--CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEE-EEETTEEEEEEEECSSCE--E-E--EETT-TTE----
T ss_pred CCC--cEEEEECCCCccccceeccccccccccccCCCCeEEE-EEccCCCCEEEEEeCCCc--E-E--EECC-CCc----
Confidence 555 366667766654211 1111234445 499976556666665542 3 4 4552 111
Q ss_pred CCeEecCC-------------------CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeE
Q 008274 252 APVKLTNG-------------------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVL 299 (571)
Q Consensus 252 ~~~~lt~~-------------------~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~ 299 (571)
....+... .....+.|+|+|++++..... ..+.+.++.+++.+.
T Consensus 185 ~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D----g~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 185 IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED----NSLVFWDANSGHMIM 247 (902)
T ss_dssp EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT----CCEEEEETTTCCEEE
T ss_pred eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC----CeEEEEECCCCcEEE
Confidence 11122211 224567999999977654433 258888887776543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0054 Score=59.95 Aligned_cols=193 Identities=9% Similarity=0.027 Sum_probs=93.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccC--CeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecCCe
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHG--NILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELDSW 157 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD--g~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~~w 157 (571)
.|.+||+.+++...+... ......+..+.|+|+ ++.++...... .|.++|+.+++... +........
T Consensus 80 ~v~iwd~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~~~~~~~~~~~~~~~ 149 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVH------AVHSASVNSVQWAPHEYGPLLLVASSDG----KVSVVEFKENGTTSPIIIDAHAIG 149 (379)
T ss_dssp CEEEEEEETTEEEEEEEE------CCCSSCEEEEEECCGGGCSEEEEEETTS----EEEEEECCTTSCCCEEEEECCTTC
T ss_pred EEEEEEcCCCceeEeeee------cCCCcceEEEEeCCCCCCCEEEEecCCC----cEEEEecCCCCceeeEEecCCCCc
Confidence 368889988863333221 234567888999999 87777665433 48888888774321 111111111
Q ss_pred eeccCCcccCCCC----CccCCC-eEEEEEecCCccEEEEEeCCCcee---eceeecCeEEEEEEEEeecC--cEEEEEE
Q 008274 158 VNLHDCFTPLDKG----VTKYSG-GFIWASEKTGFRHLYLHDINGTCL---GPITEGDWMVEQIVGVNEAS--GQVYFTG 227 (571)
Q Consensus 158 ~~~~~~~~~~~~~----~~~~~d-~~~~~s~~~g~~~l~~~~~~~~~~---~~lT~~~~~~~~~~~~s~dg--~~l~~~~ 227 (571)
+.. ..|.+.... ....++ .+++....+|.-.||-+....... ..+......+..+ .|+|++ ..+++++
T Consensus 150 v~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~-~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 150 VNS-ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV-AWSPTVLLRSYLASV 227 (379)
T ss_dssp EEE-EEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE-EECCCCSSSEEEEEE
T ss_pred eEE-EEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEE-EECCCCCCCCeEEEE
Confidence 100 011111000 000112 355555666654454443222221 2233233345555 499993 3444455
Q ss_pred cCCCCceeEEEEEEeCCCCCCCCCCCeEec----CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 228 TLDGPLESHLYCAKLYPDWNHTLEAPVKLT----NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 228 ~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt----~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
..++. ..+|.+.. ... . ....+. .......+.++|+|++++..... ..+++.++..+.
T Consensus 228 ~~dg~--i~iwd~~~--~~~-~--~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----g~i~iw~~~~~~ 289 (379)
T 3jrp_A 228 SQDRT--CIIWTQDN--EQG-P--WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD----NKVTLWKENLEG 289 (379)
T ss_dssp ETTSC--EEEEEESS--TTS-C--CEEEESSSSCCSSCEEEEEECSSSCCEEEEESS----SSEEEEEEEETT
T ss_pred eCCCE--EEEEeCCC--CCc-c--ceeeeeccccCCCcEEEEEEcCCCCEEEEecCC----CcEEEEeCCCCC
Confidence 54542 55655432 211 0 112222 12234566999999987765442 245665554333
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.87 E-value=3.8e-05 Score=77.23 Aligned_cols=138 Identities=13% Similarity=0.037 Sum_probs=79.3
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc--cch---------hhhHHHHhCCcEEEEECC
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN--TVD---------MRAQYLRSKGILVWKLDN 391 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--~~~---------~~~~~l~~~G~~v~~~d~ 391 (571)
.++..++..+..+.+.... .++..|+||++||||+.......+.. -+. .....+ .+-..++.+|.
T Consensus 25 yv~v~~~~~lfy~f~~s~~---~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw-~~~~~~lfiDq 100 (452)
T 1ivy_A 25 YLKSSGSKHLHYWFVESQK---DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSW-NLIANVLYLES 100 (452)
T ss_dssp EEECSTTEEEEEEEECCSS---CGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCG-GGSSEEEEECC
T ss_pred EEeeCCCCeEEEEEEEcCC---CCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcc-cccccEEEEec
Confidence 4455566778887665433 22467999999999997643211100 000 000001 23468999995
Q ss_pred -CCCCCChhhhHHHHhccCCC---CCchhHHHHHH-HHHHcCCCcCCcEEEEeechHHHHHHHHHh----cCCCeeEEEE
Q 008274 392 -RGTARRGLKFEASIKHNCGR---IDAEDQLTGAE-WLIKQGLAKVGHIGLYGWSYGGYLSAITLA----RFPDVFQCAV 462 (571)
Q Consensus 392 -rG~~~~~~~~~~~~~~~~~~---~~~~D~~~~~~-~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~----~~~~~~~~~v 462 (571)
+|.|.+-... ..... ...+|+.++++ ++...+....+++.|+|+||||..+-.++. ..+-.+++++
T Consensus 101 P~GtGfS~~~~-----~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ 175 (452)
T 1ivy_A 101 PAGVGFSYSDD-----KFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLA 175 (452)
T ss_dssp STTSTTCEESS-----CCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred CCCCCcCCcCC-----CCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEE
Confidence 6777653110 00100 01334444444 444434445678999999999995554443 3356689999
Q ss_pred EcCccCC
Q 008274 463 SGAPVTS 469 (571)
Q Consensus 463 ~~~~~~~ 469 (571)
.++|+++
T Consensus 176 ign~~~d 182 (452)
T 1ivy_A 176 VGNGLSS 182 (452)
T ss_dssp EESCCSB
T ss_pred ecCCccC
Confidence 9999876
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0019 Score=67.32 Aligned_cols=185 Identities=8% Similarity=0.007 Sum_probs=103.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEEC--CCCceEEEEEeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDI--KTGQRKVILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~--~~g~~~~l~~~~~~~w~ 158 (571)
.|.++|.++++.... +. . .. ....+.+||||++++... ++ ..|.++|+ +++++..-.. ...+.
T Consensus 160 ~V~v~D~~t~~~~~~-i~------~-g~-~~~~v~~spdg~~l~v~~-~d---~~V~v~D~~~~t~~~~~~i~--~g~~p 224 (543)
T 1nir_A 160 QIALVDGDSKKIVKV-ID------T-GY-AVHISRMSASGRYLLVIG-RD---ARIDMIDLWAKEPTKVAEIK--IGIEA 224 (543)
T ss_dssp EEEEEETTTCCEEEE-EE------C-ST-TEEEEEECTTSCEEEEEE-TT---SEEEEEETTSSSCEEEEEEE--CCSEE
T ss_pred eEEEEECCCceEEEE-Ee------c-Cc-ccceEEECCCCCEEEEEC-CC---CeEEEEECcCCCCcEEEEEe--cCCCc
Confidence 578899998876432 21 0 11 255788999999766654 43 35899999 7776532222 11111
Q ss_pred eccCCcccCCCCCccCC----Ce-EEEEEecCCccEEEEEeCCCceee-ceee-c----------CeEEEEEEEEeecCc
Q 008274 159 NLHDCFTPLDKGVTKYS----GG-FIWASEKTGFRHLYLHDINGTCLG-PITE-G----------DWMVEQIVGVNEASG 221 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~----d~-~~~~s~~~g~~~l~~~~~~~~~~~-~lT~-~----------~~~~~~~~~~s~dg~ 221 (571)
.+- ..++ |+ ++++++.. -..|.++|..+.+.. .+.. + .-.+..+ .++++++
T Consensus 225 -~~v---------a~sp~~~~dg~~l~v~~~~-~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i-~~s~~~~ 292 (543)
T 1nir_A 225 -RSV---------ESSKFKGYEDRYTIAGAYW-PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAI-IASHEHP 292 (543)
T ss_dssp -EEE---------EECCSTTCTTTEEEEEEEE-SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEE-EECSSSS
T ss_pred -ceE---------EeCCCcCCCCCEEEEEEcc-CCeEEEEeccccccceeecccCcccCccccccCCceEEE-EECCCCC
Confidence 111 1234 44 55554431 234677787665532 2221 1 1023344 3899999
Q ss_pred EEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 222 QVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 222 ~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.++++.... ..|..++... .. . .....+......+...|+|||++++...+.. ..+.++++.+++.+..+
T Consensus 293 ~~~vs~~~~----g~i~vvd~~~-~~-~-l~~~~i~~~~~~~~~~~spdg~~l~va~~~~---~~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 293 EFIVNVKET----GKVLLVNYKD-ID-N-LTVTSIGAAPFLHDGGWDSSHRYFMTAANNS---NKVAVIDSKDRRLSALV 362 (543)
T ss_dssp EEEEEETTT----TEEEEEECTT-SS-S-CEEEEEECCSSCCCEEECTTSCEEEEEEGGG---TEEEEEETTTTEEEEEE
T ss_pred EEEEEECCC----CeEEEEEecC-CC-c-ceeEEeccCcCccCceECCCCCEEEEEecCC---CeEEEEECCCCeEEEee
Confidence 888876544 3577777732 11 0 0112333333445678999999875544332 37888999888765555
Q ss_pred c
Q 008274 302 Y 302 (571)
Q Consensus 302 ~ 302 (571)
.
T Consensus 363 ~ 363 (543)
T 1nir_A 363 D 363 (543)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0032 Score=62.41 Aligned_cols=138 Identities=14% Similarity=0.126 Sum_probs=78.4
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+.++++++....+... .......+++.+.+..|+++. ...+ .|.+++++++..+.+......
T Consensus 139 ~I~r~~~~g~~~~~~~~~--------~~~~p~glavd~~~g~lY~~d-~~~~--~I~~~~~dg~~~~~l~~~~l~----- 202 (386)
T 3v65_B 139 RILRANLNGSNVEEVVST--------GLESPGGLAVDWVHDKLYWTD-SGTS--RIEVANLDGAHRKVLLWQSLE----- 202 (386)
T ss_dssp EEEEEETTSCCEEEEECS--------SCSCCCCEEEETTTTEEEEEE-TTTT--EEEECBTTSCSCEEEECSSCS-----
T ss_pred cEEEEecCCCCcEEEEeC--------CCCCccEEEEEeCCCeEEEEc-CCCC--eEEEEeCCCCceEEeecCCCC-----
Confidence 456667766654433211 111223456777655554443 3222 589999988766555432100
Q ss_pred cCCcccCCCCCccCC-CeEEEEEecCCccEEEEEeCCCceeeceeecCeE-EEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~-d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.|.. ...++ ++.+|+++......|++++.++...+.+...... ...+ .++++++.||++-... ..|+
T Consensus 203 ----~P~g--iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGl-avd~~~~~lY~aD~~~----~~I~ 271 (386)
T 3v65_B 203 ----KPRA--IALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGL-TIDYAGRRMYWVDAKH----HVIE 271 (386)
T ss_dssp ----CEEE--EEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEE-EEEGGGTEEEEEETTT----TEEE
T ss_pred ----CCcE--EEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeE-EEeCCCCEEEEEECCC----CEEE
Confidence 0100 01232 3566666665557899999988766666443322 2344 4999999999985533 5788
Q ss_pred EEEeCCCCC
Q 008274 239 CAKLYPDWN 247 (571)
Q Consensus 239 ~~~l~~~g~ 247 (571)
++++ +|.
T Consensus 272 ~~d~--dG~ 278 (386)
T 3v65_B 272 RANL--DGS 278 (386)
T ss_dssp EECT--TSC
T ss_pred EEeC--CCC
Confidence 8888 554
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0015 Score=64.03 Aligned_cols=118 Identities=12% Similarity=0.178 Sum_probs=73.2
Q ss_pred CCe-EEEEEecCCccEEEEEeCCCceeece---e---e----cCeEEE--EEEEEeecCcEEEEEEcCCC-----CceeE
Q 008274 175 SGG-FIWASEKTGFRHLYLHDINGTCLGPI---T---E----GDWMVE--QIVGVNEASGQVYFTGTLDG-----PLESH 236 (571)
Q Consensus 175 ~d~-~~~~s~~~g~~~l~~~~~~~~~~~~l---T---~----~~~~~~--~~~~~s~dg~~l~~~~~~~~-----~~~~~ 236 (571)
+++ ++|.+. +| ++|.+|..++..+.+ . . ..|... ....++++++.+|+....++ .....
T Consensus 236 ~dG~~~~vs~-~g--~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~ 312 (386)
T 3sjl_D 236 KAGRLVWPTY-TG--KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRF 312 (386)
T ss_dssp TTTEEEEEBT-TS--EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEE
T ss_pred CCCcEEEEeC-CC--EEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCE
Confidence 344 777766 33 699999877643222 1 1 123322 13457899999999875221 11478
Q ss_pred EEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
++.+|+. .+. ...++.-+.....+.+|+|++..+|+.+.. -..+.++|..+++.++.+.
T Consensus 313 V~viD~~-t~k----v~~~i~vg~~~~~lavs~D~~~~ly~tn~~--~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 313 VVVLDAK-TGE----RLAKFEMGHEIDSINVSQDEKPLLYALSTG--DKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp EEEEETT-TCC----EEEEEEEEEEECEEEECSSSSCEEEEEETT--TTEEEEEETTTCCEEEEEC
T ss_pred EEEEECC-CCe----EEEEEECCCCcceEEECCCCCeEEEEEcCC--CCeEEEEECCCCcEEEEec
Confidence 9999983 221 344444333445679999998555665432 3489999998888777664
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0006 Score=68.89 Aligned_cols=80 Identities=8% Similarity=0.004 Sum_probs=50.8
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCC-CceEEE-eccCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAG-GPVSWM-DLQCGG 101 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~-~~~~~~-~~~~~~ 101 (571)
....+.|||||+.|+-. .++ .|.+||+.+ ++...+ ... +
T Consensus 179 ~v~~~~~~~~~~~l~s~--~d~-----------------------------------~i~iwd~~~~~~~~~~~~~~--~ 219 (447)
T 3dw8_B 179 HINSISINSDYETYLSA--DDL-----------------------------------RINLWHLEITDRSFNIVDIK--P 219 (447)
T ss_dssp CCCEEEECTTSSEEEEE--CSS-----------------------------------EEEEEETTEEEEEEEEEECC--C
T ss_pred ceEEEEEcCCCCEEEEe--CCC-----------------------------------eEEEEECCCCCceeeeeecc--c
Confidence 45679999999988753 221 467788873 332221 110 0
Q ss_pred CCCCCCCceeEEEEEccCC-eEEEEEEeccCccEEEEEEECCCCce
Q 008274 102 TDQNYDEEYLARVNWMHGN-ILTAQVLNRSQTKLKVLKFDIKTGQR 146 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg-~~i~~~~~r~~~~~~i~~~d~~~g~~ 146 (571)
..+......+..+.|+||| +.++...... .|.+.|+.+++.
T Consensus 220 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~ 261 (447)
T 3dw8_B 220 ANMEELTEVITAAEFHPNSCNTFVYSSSKG----TIRLCDMRASAL 261 (447)
T ss_dssp SSGGGCCCCEEEEEECSSCTTEEEEEETTS----CEEEEETTTCSS
T ss_pred ccccccCcceEEEEECCCCCcEEEEEeCCC----eEEEEECcCCcc
Confidence 0112345578889999999 6777665443 388889998874
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=97.83 E-value=0.0014 Score=64.80 Aligned_cols=107 Identities=8% Similarity=0.005 Sum_probs=55.4
Q ss_pred EEEEEecCCccEEEEEeCC--CceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeE
Q 008274 178 FIWASEKTGFRHLYLHDIN--GTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVK 255 (571)
Q Consensus 178 ~~~~s~~~g~~~l~~~~~~--~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~ 255 (571)
+++....+|. |.++|+. +.....+......+..+ .|+|+|+.|+..+ .++. ..+| ++. .+. ....
T Consensus 220 ~l~sgs~D~~--v~~wd~~~~~~~~~~~~~h~~~v~~v-~~~p~~~~l~s~s-~D~~--i~lw--d~~-~~~----~~~~ 286 (380)
T 3iz6_a 220 MFISGSCDTT--VRLWDLRITSRAVRTYHGHEGDINSV-KFFPDGQRFGTGS-DDGT--CRLF--DMR-TGH----QLQV 286 (380)
T ss_dssp EEEEEETTSC--EEEEETTTTCCCCEEECCCSSCCCEE-EECTTSSEEEEEC-SSSC--EEEE--ETT-TTE----EEEE
T ss_pred EEEEEECCCe--EEEEECCCCCcceEEECCcCCCeEEE-EEecCCCeEEEEc-CCCe--EEEE--ECC-CCc----EEEE
Confidence 5555555554 4455553 22233343333345555 4999998765444 4432 4444 441 111 1111
Q ss_pred ecCC--------CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 256 LTNG--------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 256 lt~~--------~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
+... .....+.|+|+|++++..... ..+++.++..++....+
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d----g~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYSN----GDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT----SCEEEEETTTCCEEEEE
T ss_pred ecccccccccccCceEEEEECCCCCEEEEEECC----CCEEEEECCCCceEEEE
Confidence 1111 113456899999987664332 36888888777655444
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=97.83 E-value=0.0038 Score=59.48 Aligned_cols=181 Identities=8% Similarity=-0.007 Sum_probs=93.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE-EEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK-VILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~-~l~~~~~~~w~~ 159 (571)
.+.+||+.+++.... + ......+..+.|+||++.++...... .|.+.|++++... ..... ....+.
T Consensus 78 ~i~vwd~~~~~~~~~-~-------~~h~~~v~~~~~~~~~~~l~sgs~D~----~v~lWd~~~~~~~~~~~~~-h~~~v~ 144 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVD-F-------EAHPDYIRSIAVHPTKPYVLSGSDDL----TVKLWNWENNWALEQTFEG-HEHFVM 144 (304)
T ss_dssp EEEEEETTTCCEEEE-E-------ECCSSCEEEEEECSSSSEEEEEETTS----CEEEEEGGGTTEEEEEECC-CCSCEE
T ss_pred EEEEEECCCCcEEEE-E-------eCCCCcEEEEEEcCCCCEEEEECCCC----eEEEEECCCCcchhhhhcc-cCCcEE
Confidence 578899998875432 2 23456788899999999777655433 2777788877432 22211 111111
Q ss_pred ccCCcccCCCCCccCC-C-eEEEEEecCCccEEEEEeCCCcee-eceeec-CeEEEEEEEEee--cCcEEEEEEcCCCCc
Q 008274 160 LHDCFTPLDKGVTKYS-G-GFIWASEKTGFRHLYLHDINGTCL-GPITEG-DWMVEQIVGVNE--ASGQVYFTGTLDGPL 233 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~-d-~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~-~~~~~~~~~~s~--dg~~l~~~~~~~~~~ 233 (571)
. . .+++ + .+++....+|. |.++++..+.. ..+..+ ...+... .+++ ++++|+ ++..++
T Consensus 145 ~---v-------~~~p~~~~~l~sgs~D~~--v~iwd~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~l~-s~s~D~-- 208 (304)
T 2ynn_A 145 C---V-------AFNPKDPSTFASGCLDRT--VKVWSLGQSTPNFTLTTGQERGVNYV-DYYPLPDKPYMI-TASDDL-- 208 (304)
T ss_dssp E---E-------EECTTCTTEEEEEETTSE--EEEEETTCSSCSEEEECCCTTCEEEE-EECCSTTCCEEE-EEETTS--
T ss_pred E---E-------EECCCCCCEEEEEeCCCe--EEEEECCCCCccceeccCCcCcEEEE-EEEEcCCCCEEE-EEcCCC--
Confidence 0 0 1233 2 35555555553 55556544322 223222 2223333 3554 555444 444443
Q ss_pred eeEEEEEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 234 ESHLYCAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 234 ~~~l~~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.|...++. .+. ....+.. ......+.++|+++.++- .+.. ..+.+.++.+++..+.+
T Consensus 209 --~i~iWd~~-~~~----~~~~~~~h~~~v~~~~~~p~~~~l~s-~s~D---g~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 209 --TIKIWDYQ-TKS----CVATLEGHMSNVSFAVFHPTLPIIIS-GSED---GTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp --EEEEEETT-TTE----EEEEEECCSSCEEEEEECSSSSEEEE-EETT---SCEEEEETTTCCEEEEE
T ss_pred --eEEEEeCC-CCc----cceeeCCCCCCEEEEEECCCCCEEEE-EcCC---CeEEEEECCCCceeeec
Confidence 34444552 121 2233332 223455689999986543 3332 25777787666655444
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0067 Score=59.12 Aligned_cols=115 Identities=13% Similarity=0.142 Sum_probs=68.5
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCC-CeEEEEEecCCccEE
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHL 190 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~~l 190 (571)
..++..+.+..|+++. ... ..|.++++++...+.+...... .|.. ...++ ++.+|.++......|
T Consensus 119 ~glavd~~~g~ly~~d-~~~--~~I~~~~~dG~~~~~l~~~~l~---------~P~~--iavdp~~g~ly~td~~~~~~I 184 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTD-SGT--SRIEVANLDGAHRKVLLWQSLE---------KPRA--IALHPMEGTIYWTDWGNTPRI 184 (349)
T ss_dssp CEEEEETTTTEEEEEE-TTT--TEEEEEETTSCSCEEEECTTCS---------CEEE--EEEETTTTEEEEEECSSSCEE
T ss_pred cEEEEecCCCeEEEEc-CCC--CeEEEEcCCCCceEEEEeCCCC---------Ccce--EEEecCcCeEEEeccCCCCEE
Confidence 4467777655544443 222 2599999998766555421100 0100 11233 456666666545789
Q ss_pred EEEeCCCceeeceeecCeE-EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 191 YLHDINGTCLGPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 191 ~~~~~~~~~~~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
++++.++...+.+...... ...+ .++++++.||++-... ..|+++++ +|.
T Consensus 185 ~r~~~dG~~~~~~~~~~~~~PnGl-a~d~~~~~lY~aD~~~----~~I~~~~~--dG~ 235 (349)
T 3v64_C 185 EASSMDGSGRRIIADTHLFWPNGL-TIDYAGRRMYWVDAKH----HVIERANL--DGS 235 (349)
T ss_dssp EEEETTSCSCEESCCSSCSCEEEE-EEETTTTEEEEEETTT----TEEEEEET--TSC
T ss_pred EEEeCCCCCcEEEEECCCCCcceE-EEeCCCCEEEEEECCC----CEEEEEeC--CCC
Confidence 9999988766655433222 2344 4999999999985533 57889998 554
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.003 Score=61.73 Aligned_cols=160 Identities=9% Similarity=0.023 Sum_probs=85.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEcc--CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMH--GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp--Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
.+.+||+++++.... + ......+..+.|+| +|+.++...... .|.+.|+.++++........ ..+
T Consensus 177 ~v~lwd~~~~~~~~~-~-------~~h~~~v~~~~~~~~~~g~~l~sgs~Dg----~v~~wd~~~~~~~~~~~~h~-~~v 243 (354)
T 2pbi_B 177 TCALWDVESGQLLQS-F-------HGHGADVLCLDLAPSETGNTFVSGGCDK----KAMVWDMRSGQCVQAFETHE-SDV 243 (354)
T ss_dssp EEEEEETTTCCEEEE-E-------ECCSSCEEEEEECCCSSCCEEEEEETTS----CEEEEETTTCCEEEEECCCS-SCE
T ss_pred cEEEEeCCCCeEEEE-E-------cCCCCCeEEEEEEeCCCCCEEEEEeCCC----eEEEEECCCCcEEEEecCCC-CCe
Confidence 468899998875432 1 12344566677877 566666654433 38888999988654332111 111
Q ss_pred eccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee-eceeecC--eEEEEEEEEeecCcEEEEEEcCCCCce
Q 008274 159 NLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL-GPITEGD--WMVEQIVGVNEASGQVYFTGTLDGPLE 234 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~ 234 (571)
.. + .+++++ +++....+|. |.++++..+.. ..+.... ..+..+ .|+++|+.|+..+....
T Consensus 244 ~~------v----~~~p~~~~l~s~s~D~~--v~lwd~~~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~~g~~d~~--- 307 (354)
T 2pbi_B 244 NS------V----RYYPSGDAFASGSDDAT--CRLYDLRADREVAIYSKESIIFGASSV-DFSLSGRLLFAGYNDYT--- 307 (354)
T ss_dssp EE------E----EECTTSSEEEEEETTSC--EEEEETTTTEEEEEECCTTCCSCEEEE-EECTTSSEEEEEETTSC---
T ss_pred EE------E----EEeCCCCEEEEEeCCCe--EEEEECCCCcEEEEEcCCCcccceeEE-EEeCCCCEEEEEECCCc---
Confidence 10 0 233443 5555555554 55566555433 2222221 233444 49999987766554322
Q ss_pred eEEEEEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEE
Q 008274 235 SHLYCAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVD 276 (571)
Q Consensus 235 ~~l~~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~ 276 (571)
..+| ++. .+. ....+.. ......+.|||||++++.
T Consensus 308 i~vw--d~~-~~~----~~~~l~~h~~~v~~l~~spdg~~l~s 343 (354)
T 2pbi_B 308 INVW--DVL-KGS----RVSILFGHENRVSTLRVSPDGTAFCS 343 (354)
T ss_dssp EEEE--ETT-TCS----EEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred EEEE--ECC-CCc----eEEEEECCCCcEEEEEECCCCCEEEE
Confidence 4444 442 222 2333433 223456689999987654
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0024 Score=62.45 Aligned_cols=81 Identities=2% Similarity=-0.096 Sum_probs=50.3
Q ss_pred EEeecCcEEEEEEcCC-C---CceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEE
Q 008274 215 GVNEASGQVYFTGTLD-G---PLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLC 290 (571)
Q Consensus 215 ~~s~dg~~l~~~~~~~-~---~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~ 290 (571)
.+++|++.+|+...+. + .....+..+|+.. .. ....+.-+.+-....+++||+++++..... ...+.++
T Consensus 270 ~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t-~~----vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~--~~~VsVI 342 (368)
T 1mda_H 270 AKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-GQ----TSGPISNGHDSDAIIAAQDGASDNYANSAG--TEVLDIY 342 (368)
T ss_dssp EEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-CC----EEECCEEEEEECEEEECCSSSCEEEEEETT--TTEEEEE
T ss_pred EEcCCCCEEEEEeccccCcccccCCCEEEEECCC-Ce----EEEEEECCCCcceEEECCCCCEEEEEccCC--CCeEEEE
Confidence 4899999999976522 1 0012333778731 21 233343333345668999999776665511 2489999
Q ss_pred EcCCCceeEecc
Q 008274 291 SLQDGSLVLPLY 302 (571)
Q Consensus 291 ~~~~~~~~~~l~ 302 (571)
|+.+++.++.+.
T Consensus 343 D~~t~kvv~~I~ 354 (368)
T 1mda_H 343 DAASDQDQSSVE 354 (368)
T ss_dssp ESSSCEEEEECC
T ss_pred ECCCCcEEEEEE
Confidence 998888776664
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00092 Score=65.22 Aligned_cols=57 Identities=5% Similarity=0.080 Sum_probs=41.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEE--ccCCeEEEEEEeccCccEEEEEEECCCCceEEEE
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNW--MHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL 150 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~w--spDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~ 150 (571)
.|.+||+.+++...+. .....+..+.| +||++.++...... .|.+.|+.+++.....
T Consensus 109 ~v~iwd~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~ 167 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIA---------QHDAPVKTIHWIKAPNYSCVMTGSWDK----TLKFWDTRSSNPMMVL 167 (368)
T ss_dssp EEEEEETTTTEEEEEE---------ECSSCEEEEEEEECSSCEEEEEEETTS----EEEEECSSCSSCSEEE
T ss_pred cEEEEEcCCCCceeec---------cccCceEEEEEEeCCCCCEEEEccCCC----cEEEEECCCCcEEEEE
Confidence 4788999998876542 24567788999 89998777665433 4889999988754433
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00031 Score=68.04 Aligned_cols=182 Identities=5% Similarity=-0.074 Sum_probs=97.2
Q ss_pred EEEEEEC-CCCceEEEeccCCCCCCCC--CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC---------CceEE
Q 008274 81 RLGVVSA-AGGPVSWMDLQCGGTDQNY--DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT---------GQRKV 148 (571)
Q Consensus 81 ~l~~~dl-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~---------g~~~~ 148 (571)
.|.+||+ .+++...+ .. ....+..+.|+| ++.++...... .|...|+.+ ++...
T Consensus 80 ~i~~wd~~~~~~~~~~---------~~~~~~~~v~~l~~~~-~~~l~s~~~d~----~i~iwd~~~~~~~~~~~~~~~~~ 145 (342)
T 1yfq_A 80 EILKVDLIGSPSFQAL---------TNNEANLGICRICKYG-DDKLIAASWDG----LIEVIDPRNYGDGVIAVKNLNSN 145 (342)
T ss_dssp CEEEECSSSSSSEEEC---------BSCCCCSCEEEEEEET-TTEEEEEETTS----EEEEECHHHHTTBCEEEEESCSS
T ss_pred eEEEEEeccCCceEec---------cccCCCCceEEEEeCC-CCEEEEEcCCC----eEEEEcccccccccccccCCeee
Confidence 3688999 88876544 23 456788899999 77776654332 377777665 32111
Q ss_pred EEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCC-cee--ece-eecCeEEEEEEEEee-cCcEE
Q 008274 149 ILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDING-TCL--GPI-TEGDWMVEQIVGVNE-ASGQV 223 (571)
Q Consensus 149 l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~-~~~--~~l-T~~~~~~~~~~~~s~-dg~~l 223 (571)
.... ...+ . ...+++++ ++....+| .|+++++.+ +.. ... ......+..+ .|+| +++.+
T Consensus 146 ~~~~--~~~v------~----~~~~~~~~-l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~i~~i-~~~~~~~~~l 209 (342)
T 1yfq_A 146 NTKV--KNKI------F----TMDTNSSR-LIVGMNNS--QVQWFRLPLCEDDNGTIEESGLKYQIRDV-ALLPKEQEGY 209 (342)
T ss_dssp SSSS--CCCE------E----EEEECSSE-EEEEESTT--EEEEEESSCCTTCCCEEEECSCSSCEEEE-EECSGGGCEE
T ss_pred EEee--CCce------E----EEEecCCc-EEEEeCCC--eEEEEECCccccccceeeecCCCCceeEE-EECCCCCCEE
Confidence 0000 0000 0 01345566 33333443 577777765 321 112 2223345555 4999 88877
Q ss_pred EEEEcCCCCceeEEEEEEeCCCCCC-CCCCCeEecCCC----------ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 224 YFTGTLDGPLESHLYCAKLYPDWNH-TLEAPVKLTNGK----------GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 224 ~~~~~~~~~~~~~l~~~~l~~~g~~-~~~~~~~lt~~~----------g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
+..+. ++ ...+|.++. .+.. .......+.... ....+.++|++++++..... ..++++++
T Consensus 210 ~~~~~-dg--~i~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~vwd~ 280 (342)
T 1yfq_A 210 ACSSI-DG--RVAVEFFDD--QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD----GIISCWNL 280 (342)
T ss_dssp EEEET-TS--EEEEEECCT--TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT----SCEEEEET
T ss_pred EEEec-CC--cEEEEEEcC--CCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC----ceEEEEcC
Confidence 66654 33 255655543 3100 000223333221 34556899999877654322 36888898
Q ss_pred CCCceeEec
Q 008274 293 QDGSLVLPL 301 (571)
Q Consensus 293 ~~~~~~~~l 301 (571)
.+++.+..+
T Consensus 281 ~~~~~~~~~ 289 (342)
T 1yfq_A 281 QTRKKIKNF 289 (342)
T ss_dssp TTTEEEEEC
T ss_pred ccHhHhhhh
Confidence 777765544
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0035 Score=60.36 Aligned_cols=164 Identities=11% Similarity=0.082 Sum_probs=82.8
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC-eEEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG-GFIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d-~~~~~s~~~ 185 (571)
....+..+.|+|||++++...... .|...+...+............-... .+.++ .+++....+
T Consensus 85 h~~~V~~~~~s~dg~~l~s~~~d~----~i~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~s~s~d 149 (340)
T 4aow_A 85 HSHFVSDVVISSDGQFALSGSWDG----TLRLWDLTTGTTTRRFVGHTKDVLSV-----------AFSSDNRQIVSGSRD 149 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTTEEEEEEECCSSCEEEE-----------EECTTSSCEEEEETT
T ss_pred CCCCEEEEEECCCCCEEEEEcccc----cceEEeecccceeeeecCCCCceeEE-----------EEeecCccceeecCC
Confidence 456788899999999877665433 47888888876554433222110000 01122 244444445
Q ss_pred CccEEEEEeCCCceeecee--ecCeEEEEEEEEeecCcE-EEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC-Cc
Q 008274 186 GFRHLYLHDINGTCLGPIT--EGDWMVEQIVGVNEASGQ-VYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG-KG 261 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT--~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~-~g 261 (571)
|. +.+++..+.....+. .....+... .+++++.. +++++..++. +...++. .+. ....+... ..
T Consensus 150 ~~--~~~~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~s~~~d~~----i~i~d~~-~~~----~~~~~~~h~~~ 217 (340)
T 4aow_A 150 KT--IKLWNTLGVCKYTVQDESHSEWVSCV-RFSPNSSNPIIVSCGWDKL----VKVWNLA-NCK----LKTNHIGHTGY 217 (340)
T ss_dssp SC--EEEECTTSCEEEEECSSSCSSCEEEE-EECSCSSSCEEEEEETTSC----EEEEETT-TTE----EEEEECCCSSC
T ss_pred Ce--EEEEEeCCCceEEEEeccccCcccce-EEccCCCCcEEEEEcCCCE----EEEEECC-CCc----eeeEecCCCCc
Confidence 54 444555444322221 112223333 36666543 4444444432 3344551 111 22223322 23
Q ss_pred eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 262 KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 262 ~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
...+.++|++++++..... ..+.+.++.+.+.+..+
T Consensus 218 v~~~~~s~~~~~l~s~s~D----g~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKD----GQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp EEEEEECTTSSEEEEEETT----CEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCC----CeEEEEEeccCceeeee
Confidence 4556899999877654322 36777787666554443
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0053 Score=59.26 Aligned_cols=188 Identities=13% Similarity=0.109 Sum_probs=96.2
Q ss_pred EEEEEECCCCceE-EEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|+++|+++++.. .+....+. ........+.+ .+++ ++.. +.. ....|.++|+++++.........
T Consensus 106 ~v~~iD~~t~~~~~~i~~g~~~----~~~~~p~~i~~-~~~~-lyv~-~~~-~~~~v~viD~~t~~~~~~i~~g~----- 172 (328)
T 3dsm_A 106 RIFIINPKTYEITGYIECPDMD----MESGSTEQMVQ-YGKY-VYVN-CWS-YQNRILKIDTETDKVVDELTIGI----- 172 (328)
T ss_dssp EEEEEETTTTEEEEEEECTTCC----TTTCBCCCEEE-ETTE-EEEE-ECT-TCCEEEEEETTTTEEEEEEECSS-----
T ss_pred eEEEEECCCCeEEEEEEcCCcc----ccCCCcceEEE-ECCE-EEEE-cCC-CCCEEEEEECCCCeEEEEEEcCC-----
Confidence 5788999988765 34332100 00012223455 3444 3333 221 12359999999987543222110
Q ss_pred ccCCcccCCCCCccCCCeEEEEEecCC---------ccEEEEEeCCCceee-ceee--cCeEEEEEEEEeecCcEEEEEE
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWASEKTG---------FRHLYLHDINGTCLG-PITE--GDWMVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s~~~g---------~~~l~~~~~~~~~~~-~lT~--~~~~~~~~~~~s~dg~~l~~~~ 227 (571)
.|. ....++++-++++.... -..|+++|..+++.. .+.- +. ....+ .++||++.||++.
T Consensus 173 -----~p~--~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~-~p~~l-a~~~d~~~lyv~~ 243 (328)
T 3dsm_A 173 -----QPT--SLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGD-WPSEV-QLNGTRDTLYWIN 243 (328)
T ss_dssp -----CBC--CCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTC-CCEEE-EECTTSCEEEEES
T ss_pred -----Ccc--ceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCC-CceeE-EEecCCCEEEEEc
Confidence 011 11224555333333322 258999998877653 3332 22 23344 4899999999874
Q ss_pred cCCCCceeEEEEEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEE-eeCCCCCCEEEEEEcCCCceeEec
Q 008274 228 TLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDF-HDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 228 ~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~-~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
. .++++++. .+. ......++. ......+.++|++..+... ..+......+++++.. ++.++.+
T Consensus 244 ~-------~v~~~d~~-t~~--~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 244 N-------DIWRMPVE-ADR--VPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp S-------SEEEEETT-CSS--CCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred c-------EEEEEECC-CCc--eeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 3 68888873 221 101111222 2334566899854444333 2222345688888874 7655544
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=97.76 E-value=0.0057 Score=59.33 Aligned_cols=173 Identities=15% Similarity=0.102 Sum_probs=80.5
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCC----------eEEEEEEeccCccEEEEEEECCCCceEEEEE
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGN----------ILTAQVLNRSQTKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg----------~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~ 151 (571)
+.+||+.+......... ......+..+.|+|++ ..++... .++ .|.+.|.. ++......
T Consensus 142 i~~wd~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~---~i~iwd~~-~~~~~~~~ 210 (343)
T 2xzm_R 142 IKLWNILGECKFSSAEK------ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG-WDG---RLKVWNTN-FQIRYTFK 210 (343)
T ss_dssp EEEEESSSCEEEECCTT------TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE-TTS---EEEEEETT-TEEEEEEE
T ss_pred EEEEeccCCceeeeecc------cCCCceeeeeeeccccccccccCCCCCEEEEEc-CCC---EEEEEcCC-CceeEEEc
Confidence 57788875433322110 1234567889999997 3444443 222 36666743 33222111
Q ss_pred eecCCeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCC-Cce-eeceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 152 EELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDIN-GTC-LGPITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 152 ~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~-~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
... ..+. . ..+++++ +++....+| .|.++++. ... ...+..+. .+..+ .|+|++..+.. +.
T Consensus 211 ~h~-~~v~------~----~~~s~~g~~l~sgs~dg--~v~iwd~~~~~~~~~~~~~~~-~v~~v-~~sp~~~~la~-~~ 274 (343)
T 2xzm_R 211 AHE-SNVN------H----LSISPNGKYIATGGKDK--KLLIWDILNLTYPQREFDAGS-TINQI-AFNPKLQWVAV-GT 274 (343)
T ss_dssp CCS-SCEE------E----EEECTTSSEEEEEETTC--EEEEEESSCCSSCSEEEECSS-CEEEE-EECSSSCEEEE-EE
T ss_pred Ccc-ccce------E----EEECCCCCEEEEEcCCC--eEEEEECCCCcccceeecCCC-cEEEE-EECCCCCEEEE-EC
Confidence 111 1111 0 1244555 555555555 45555652 222 22222222 35555 49999886653 33
Q ss_pred CCCCceeEEEEEEeCCCCCCCCCCCeEec------------CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 229 LDGPLESHLYCAKLYPDWNHTLEAPVKLT------------NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 229 ~~~~~~~~l~~~~l~~~g~~~~~~~~~lt------------~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
... ..+| ++. .+. . .....+. .......+.|+|+|++++..... ..+.+.++.
T Consensus 275 d~~---v~iw--~~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D----g~v~~w~~~ 339 (343)
T 2xzm_R 275 DQG---VKIF--NLM-TQS-K-APVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD----GVIRTFSFE 339 (343)
T ss_dssp SSC---EEEE--ESS-SCC-S-CSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT----SEEEEEEEE
T ss_pred CCC---EEEE--EeC-CCC-C-CceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC----ceEEEEEEE
Confidence 222 4444 441 111 0 0101121 11224566899999877654322 256665553
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=97.76 E-value=0.0033 Score=63.32 Aligned_cols=160 Identities=10% Similarity=0.021 Sum_probs=84.7
Q ss_pred CCceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCc---e-EEEEEeecCCeeeccCCcccCCCCCccCCCe--EE
Q 008274 107 DEEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQ---R-KVILVEELDSWVNLHDCFTPLDKGVTKYSGG--FI 179 (571)
Q Consensus 107 ~~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~---~-~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~--~~ 179 (571)
....+..+.|+|++. .++...... .|.+.|+.++. . ..+...... +. .+ .+++++ ++
T Consensus 230 h~~~v~~v~~~p~~~~~l~s~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~--v~------~i----~~~p~~~~~l 293 (430)
T 2xyi_A 230 HTAVVEDVAWHLLHESLFGSVADDQ----KLMIWDTRNNNTSKPSHTVDAHTAE--VN------CL----SFNPYSEFIL 293 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTS----EEEEEETTCSCSSSCSEEEECCSSC--EE------EE----EECSSCTTEE
T ss_pred CCCCEeeeEEeCCCCCEEEEEeCCC----eEEEEECCCCCCCcceeEeecCCCC--eE------EE----EeCCCCCCEE
Confidence 455688899999554 555544332 48888998763 2 222111111 11 00 233433 56
Q ss_pred EEEecCCccEEEEEeCCC--ceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCC-------
Q 008274 180 WASEKTGFRHLYLHDING--TCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTL------- 250 (571)
Q Consensus 180 ~~s~~~g~~~l~~~~~~~--~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~------- 250 (571)
+....+|. |.++++.. .....+......+..+ .|+|+++.+++++..++. ..+|.+.. .+....
T Consensus 294 ~tg~~dg~--v~vwd~~~~~~~~~~~~~h~~~v~~i-~~sp~~~~~l~s~~~d~~--i~iwd~~~--~~~~~~~~~~~~~ 366 (430)
T 2xyi_A 294 ATGSADKT--VALWDLRNLKLKLHSFESHKDEIFQV-QWSPHNETILASSGTDRR--LHVWDLSK--IGEEQSTEDAEDG 366 (430)
T ss_dssp EEEETTSE--EEEEETTCTTSCSEEEECCSSCEEEE-EECSSCTTEEEEEETTSC--CEEEEGGG--TTCCCCHHHHHHC
T ss_pred EEEeCCCe--EEEEeCCCCCCCeEEeecCCCCEEEE-EECCCCCCEEEEEeCCCc--EEEEeCCC--CccccCccccccC
Confidence 56666664 66666554 2234444334445555 499999888888876653 55554432 111000
Q ss_pred -CCC-eEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 251 -EAP-VKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 251 -~~~-~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
... ..+.. ......+.++|++++++++.+.. ..+.+.++
T Consensus 367 ~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~d---g~i~iw~~ 408 (430)
T 2xyi_A 367 PPELLFIHGGHTAKISDFSWNPNEPWIICSVSED---NIMQVWQM 408 (430)
T ss_dssp CTTEEEECCCCSSCEEEEEECSSSTTEEEEEETT---SEEEEEEE
T ss_pred CcceEEEcCCCCCCceEEEECCCCCCEEEEEECC---CCEEEeEc
Confidence 011 11111 12345668999998666655543 25666665
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=97.74 E-value=0.0048 Score=61.82 Aligned_cols=182 Identities=9% Similarity=0.019 Sum_probs=95.4
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE--EEEEee-cCCe
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK--VILVEE-LDSW 157 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~--~l~~~~-~~~w 157 (571)
.+.++|..........+ ......+....|+|+|+.++...+.. .|.+.|..+++.. .+.... ....
T Consensus 210 ~i~~~d~~~~~~~~~~~-------~~h~~~~~~~~~~~~g~~l~s~~~D~----~v~i~~~~~~~~~~~~~~~~~~~~~~ 278 (420)
T 4gga_A 210 HIHHHDVRVAEHHVATL-------SGHSQEVCGLRWAPDGRHLASGGNDN----LVNVWPSAPGEGGWVPLQTFTQHQGA 278 (420)
T ss_dssp EEEEEETTSSSCEEEEE-------ECCSSCEEEEEECTTSSEEEEEETTS----CEEEEESSCCSSCSCCSEEECCCSSC
T ss_pred ceeEeeecccceeeEEe-------cccccceeeeeecCCCCeeeeeeccc----cceEEeeccccccceeeeeecccCCc
Confidence 45667776544433333 23455677889999999877765544 2777788876532 111111 1111
Q ss_pred eeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 158 VNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
+.. ..|.+ ....++.......-..|.++++.+++..........+.... |+++++.++..+...+ ..|
T Consensus 279 V~~-~~~~p-------~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~-~~~~~~~lv~~sg~~d---~~I 346 (420)
T 4gga_A 279 VKA-VAWCP-------WQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSIL-WSPHYKELISGHGFAQ---NQL 346 (420)
T ss_dssp EEE-EEECT-------TCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEE-EETTTTEEEEEECTTT---CCE
T ss_pred eee-eeeCC-------CcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeee-ecCCCCeEEEEEecCC---CEE
Confidence 100 01111 11224443322223467777877766543333333455554 8999999888764322 234
Q ss_pred EEEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCC
Q 008274 238 YCAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 294 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~ 294 (571)
+..++. .+. ....+.. ......+.|||||++++ +.+... .+.+.++.+
T Consensus 347 ~iwd~~-~~~----~v~~l~gH~~~V~~l~~spdg~~l~-S~s~D~---tvriWdv~~ 395 (420)
T 4gga_A 347 VIWKYP-TMA----KVAELKGHTSRVLSLTMSPDGATVA-SAAADE---TLRLWRCFE 395 (420)
T ss_dssp EEEETT-TCC----EEEEECCCSSCEEEEEECTTSSCEE-EEETTT---EEEEECCSC
T ss_pred EEEECC-CCc----EEEEEcCCCCCEEEEEEcCCCCEEE-EEecCC---eEEEEECCC
Confidence 445552 222 3344543 23345668999998765 344332 466655543
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0064 Score=58.01 Aligned_cols=180 Identities=11% Similarity=0.057 Sum_probs=92.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+.+|.+++....+.. ......+++++||++++ + +...+...|+++|..+|+.+.+.......+.+.
T Consensus 54 ~I~~~d~~g~~~~~~~~----------~~~p~gia~~~dG~l~v-a-d~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g 121 (306)
T 2p4o_A 54 EIVSITPDGNQQIHATV----------EGKVSGLAFTSNGDLVA-T-GWNADSIPVVSLVKSDGTVETLLTLPDAIFLNG 121 (306)
T ss_dssp EEEEECTTCCEEEEEEC----------SSEEEEEEECTTSCEEE-E-EECTTSCEEEEEECTTSCEEEEEECTTCSCEEE
T ss_pred eEEEECCCCceEEEEeC----------CCCceeEEEcCCCcEEE-E-eccCCcceEEEEcCCCCeEEEEEeCCCccccCc
Confidence 46777777654333322 23566789999998433 2 322222358999999998876654322212111
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeece------e----ecCeEEEEEEEEeecCcEEEEEEcCC
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPI------T----EGDWMVEQIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~l------T----~~~~~~~~~~~~s~dg~~l~~~~~~~ 230 (571)
.. .+ +++.++.++. +...||+++..+++.+.. . .+.+. .+..+++|++.||++-...
T Consensus 122 -~~--------~~-~~~~~~v~d~-~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~--~pngis~dg~~lyv~d~~~ 188 (306)
T 2p4o_A 122 -IT--------PL-SDTQYLTADS-YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP--AANGLKRFGNFLYVSNTEK 188 (306)
T ss_dssp -EE--------ES-SSSEEEEEET-TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC--SEEEEEEETTEEEEEETTT
T ss_pred -cc--------cc-CCCcEEEEEC-CCCeEEEEeCCCCcEeEEEECCccccccccCCCC--cCCCcCcCCCEEEEEeCCC
Confidence 00 01 2333444543 223799999876432111 0 01111 1223488999999987644
Q ss_pred CCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 231 GPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 231 ~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
..|+++++..++. ....+.+.....-....++++|+.+ +.... ...+.+++. +++
T Consensus 189 ----~~I~~~~~~~~g~--~~~~~~~~~~~~P~gi~vd~dG~l~--va~~~--~~~V~~~~~-~G~ 243 (306)
T 2p4o_A 189 ----MLLLRIPVDSTDK--PGEPEIFVEQTNIDDFAFDVEGNLY--GATHI--YNSVVRIAP-DRS 243 (306)
T ss_dssp ----TEEEEEEBCTTSC--BCCCEEEEESCCCSSEEEBTTCCEE--EECBT--TCCEEEECT-TCC
T ss_pred ----CEEEEEEeCCCCC--CCccEEEeccCCCCCeEECCCCCEE--EEeCC--CCeEEEECC-CCC
Confidence 4688888732222 1122222211112235777888643 33221 235777775 354
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.73 E-value=4.5e-05 Score=73.62 Aligned_cols=93 Identities=15% Similarity=0.015 Sum_probs=53.8
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcC
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQG 428 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 428 (571)
.|.|+++||.+++.. .|..++..| ++.|+.+|+++.. ....++++.+.+...+...
T Consensus 46 ~~~l~~~hg~~g~~~-------~~~~~~~~l---~~~v~~~~~~~~~--------------~~~~~~~~a~~~~~~i~~~ 101 (316)
T 2px6_A 46 ERPLFLVHPIEGSTT-------VFHSLASRL---SIPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQV 101 (316)
T ss_dssp SCCEEEECCTTCCSG-------GGHHHHHHC---SSCEEEECCCTTS--------------CTTCHHHHHHHHHHHHTTT
T ss_pred CCeEEEECCCCCCHH-------HHHHHHHhc---CCCEEEEECCCCC--------------CcCCHHHHHHHHHHHHHHh
Confidence 466788999766532 233334444 3899999998310 0111333333322222221
Q ss_pred CCcCCcEEEEeechHHHHHHHHHhcC---CCe---eEEEEEcCc
Q 008274 429 LAKVGHIGLYGWSYGGYLSAITLARF---PDV---FQCAVSGAP 466 (571)
Q Consensus 429 ~~d~~~i~l~G~S~GG~~a~~~~~~~---~~~---~~~~v~~~~ 466 (571)
....++.++|||+||.++..++.+. +.. ++.++..++
T Consensus 102 -~~~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~ 144 (316)
T 2px6_A 102 -QPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDG 144 (316)
T ss_dssp -CSSCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESC
T ss_pred -CCCCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcC
Confidence 1236799999999999999888754 334 666666444
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.013 Score=57.65 Aligned_cols=104 Identities=13% Similarity=-0.088 Sum_probs=58.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEe------ccCccEEEEEEECCCCceEEEEEee-
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLN------RSQTKLKVLKFDIKTGQRKVILVEE- 153 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~------r~~~~~~i~~~d~~~g~~~~l~~~~- 153 (571)
.++++|.++++... ++. .+. ...+.+||||+.++.... |......|..+|+++++...-....
T Consensus 48 ~v~v~D~~t~~~~~-~i~-------~g~--~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~ 117 (373)
T 2mad_H 48 QQWVLDAGSGSILG-HVN-------GGF--LPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD 117 (373)
T ss_pred EEEEEECCCCeEEE-Eec-------CCC--CCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCC
Confidence 57899999887643 221 111 227899999997776642 2223346889999987754321111
Q ss_pred cCCeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee
Q 008274 154 LDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL 200 (571)
Q Consensus 154 ~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~ 200 (571)
...+.. . ..+....+++|+ +++.++...-..|..+| ++++.
T Consensus 118 ~~~~~~-g----~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~ 159 (373)
T 2mad_H 118 APRFDV-G----PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSS 159 (373)
T ss_pred cccccc-C----CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCE
Confidence 010000 0 001112345665 66666554345788899 77654
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.68 E-value=0.006 Score=58.54 Aligned_cols=157 Identities=14% Similarity=0.132 Sum_probs=84.3
Q ss_pred EEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCC-CeEEEEEecCCccEEE
Q 008274 113 RVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLY 191 (571)
Q Consensus 113 ~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~~l~ 191 (571)
.+++.+.+..|+++ +... ..|.++++++...+.+...... .|.. ...++ ++.+|.++......|+
T Consensus 83 glavd~~~g~ly~~-d~~~--~~I~~~~~dG~~~~~l~~~~~~---------~P~g--iavdp~~g~ly~td~~~~~~I~ 148 (318)
T 3sov_A 83 GLACDWLGEKLYWT-DSET--NRIEVSNLDGSLRKVLFWQELD---------QPRA--IALDPSSGFMYWTDWGEVPKIE 148 (318)
T ss_dssp EEEEETTTTEEEEE-ETTT--TEEEEEETTSCSCEEEECSSCS---------SEEE--EEEEGGGTEEEEEECSSSCEEE
T ss_pred EEEEEcCCCeEEEE-ECCC--CEEEEEECCCCcEEEEEeCCCC---------CccE--EEEeCCCCEEEEEecCCCCEEE
Confidence 45666655444443 3322 2589999988766655421110 0100 01222 3466666654457899
Q ss_pred EEeCCCceeeceeecCeE-EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC--ceEEEEEC
Q 008274 192 LHDINGTCLGPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK--GKHVAVLD 268 (571)
Q Consensus 192 ~~~~~~~~~~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~--g~~~~~~s 268 (571)
+++.+|...+.+...... ...+ .++++++.||++-... ..|+++++ +|. ..+.+.... .-...++.
T Consensus 149 r~~~dG~~~~~~~~~~l~~Pngl-avd~~~~~lY~aD~~~----~~I~~~d~--dG~----~~~~~~~~~~~~P~glav~ 217 (318)
T 3sov_A 149 RAGMDGSSRFIIINSEIYWPNGL-TLDYEEQKLYWADAKL----NFIHKSNL--DGT----NRQAVVKGSLPHPFALTLF 217 (318)
T ss_dssp EEETTSCSCEEEECSSCSCEEEE-EEETTTTEEEEEETTT----TEEEEEET--TSC----SCEEEECSCCSCEEEEEEE
T ss_pred EEEcCCCCeEEEEECCCCCccEE-EEeccCCEEEEEECCC----CEEEEEcC--CCC----ceEEEecCCCCCceEEEEe
Confidence 999988765555333222 2334 4999999999985433 57999998 654 333333211 12223333
Q ss_pred CCCCEEEEEeeCCCCCCEEEEEEcCCCceeE
Q 008274 269 HNMRNFVDFHDSLDSPPRILLCSLQDGSLVL 299 (571)
Q Consensus 269 ~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~ 299 (571)
+..++++ .. ....+++++..+|+..+
T Consensus 218 --~~~lywt-d~--~~~~V~~~~~~~G~~~~ 243 (318)
T 3sov_A 218 --EDILYWT-DW--STHSILACNKYTGEGLR 243 (318)
T ss_dssp --TTEEEEE-ET--TTTEEEEEETTTCCSCE
T ss_pred --CCEEEEE-ec--CCCeEEEEECCCCCceE
Confidence 3344443 21 23467777765555433
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0039 Score=64.96 Aligned_cols=179 Identities=13% Similarity=0.084 Sum_probs=98.3
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCc-cCCC-eEEEEEecCC
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVT-KYSG-GFIWASEKTG 186 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~-~~~d-~~~~~s~~~g 186 (571)
.......|+|||++++...+..+ .|..+|+++++......-...... |-. +.. .+++ +-+|.+...|
T Consensus 342 ~~~~d~~~~pdgr~~~va~~~sn---~V~ViD~~t~kl~~~i~vgg~~Ph-------pg~-g~~~~~p~~g~v~~t~~~g 410 (567)
T 1qks_A 342 RFLHDGGLDGSHRYFITAANARN---KLVVIDTKEGKLVAIEDTGGQTPH-------PGR-GANFVHPTFGPVWATSHMG 410 (567)
T ss_dssp SSEEEEEECTTSCEEEEEEGGGT---EEEEEETTTTEEEEEEECSSSSBC-------CTT-CEEEEETTTEEEEEEEBSS
T ss_pred ccccCceECCCCCEEEEEeCCCC---eEEEEECCCCcEEEEEeccCcCCC-------Ccc-ceeeECCCCCcEEEeCCCC
Confidence 34556789999997666654332 488999999975443321011110 000 000 1233 4555555545
Q ss_pred ccEEEEEeCCCc--------eeeceee-cCeEEEEEEEEeecCcEEEEEEcCCCC---ceeEEEEEEeCCC---CCCCCC
Q 008274 187 FRHLYLHDINGT--------CLGPITE-GDWMVEQIVGVNEASGQVYFTGTLDGP---LESHLYCAKLYPD---WNHTLE 251 (571)
Q Consensus 187 ~~~l~~~~~~~~--------~~~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~---~~~~l~~~~l~~~---g~~~~~ 251 (571)
-..|.+++.+.+ ..+.|.. +.. .-++..+|++++||..... +| ....|..+++... |.. .
T Consensus 411 ~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g--~~~i~~~p~~~~l~v~~~~-~~~~~~~~~v~v~d~~~~~~~g~~--~ 485 (567)
T 1qks_A 411 DDSVALIGTDPEGHPDNAWKILDSFPALGGG--SLFIKTHPNSQYLYVDATL-NPEAEISGSVAVFDIKAMTGDGSD--P 485 (567)
T ss_dssp SSEEEEEECCTTTCTTTBTSEEEEEECSCSC--CCCEECCTTCSEEEEECTT-CSSHHHHTCEEEEEGGGCCCSSSC--C
T ss_pred CCeEEEecCCCCCCccccCEEEEEEecCCCC--CEEEEeCCCCCeEEEecCC-CCCcccCceEEEEECCcccccccC--C
Confidence 556888886652 2233322 111 0123468999999987532 22 1356777776321 100 0
Q ss_pred CCeEecC---------CCceEEEEECCCCCEEEEEeeCC-CCCCEEEEEEcCCCceeEeccC
Q 008274 252 APVKLTN---------GKGKHVAVLDHNMRNFVDFHDSL-DSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 252 ~~~~lt~---------~~g~~~~~~s~~g~~~v~~~s~~-~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
..+.+.- +.....+.++++|+++.++.-+. .....|.++|..+.+..+.+..
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 486 EFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp CEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred CcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 1133421 12234568999999988875332 3457899999988877666543
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=97.67 E-value=0.0025 Score=63.07 Aligned_cols=140 Identities=13% Similarity=0.093 Sum_probs=77.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCC---CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee----
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYD---EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE---- 153 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~---~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~---- 153 (571)
.|.+||+.+++.... +.. .... ...+..+.|+|||+.++...... ....|.++|+.+++........
T Consensus 208 ~i~i~d~~~~~~~~~-~~~----~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~-~~g~i~i~d~~~~~~~~~~~~~~~~~ 281 (397)
T 1sq9_A 208 TVQISELSTLRPLYN-FES----QHSMINNSNSIRSVKFSPQGSLLAIAHDSN-SFGCITLYETEFGERIGSLSVPTHSS 281 (397)
T ss_dssp EEEEEETTTTEEEEE-EEC----CC---CCCCCEEEEEECSSTTEEEEEEEET-TEEEEEEEETTTCCEEEEECBC----
T ss_pred cEEEEECCCCceeEE-Eec----cccccccCCccceEEECCCCCEEEEEecCC-CCceEEEEECCCCcccceeccCcccc
Confidence 478899988765432 210 0002 55788899999999877665441 1235999999988765433320
Q ss_pred --------cCCeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee-ecee------ec-----------
Q 008274 154 --------LDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL-GPIT------EG----------- 206 (571)
Q Consensus 154 --------~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~-~~lT------~~----------- 206 (571)
....+. . ..+++++ +++....+| .|+++++..++. ..+. ..
T Consensus 282 ~~~~~~~~~~~~v~------~----~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 349 (397)
T 1sq9_A 282 QASLGEFAHSSWVM------S----LSFNDSGETLCSAGWDG--KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHG 349 (397)
T ss_dssp ----CCBSBSSCEE------E----EEECSSSSEEEEEETTS--EEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTS
T ss_pred cccccccccCCcEE------E----EEECCCCCEEEEEeCCC--eEEEEEcCCCceeEEEecccCcccchhhhhcccccc
Confidence 011110 0 1334444 555555555 567777766553 3333 22
Q ss_pred ----CeEEEEEEEEeecCc---------EEEEEEcCCCCceeEEEEEE
Q 008274 207 ----DWMVEQIVGVNEASG---------QVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 207 ----~~~~~~~~~~s~dg~---------~l~~~~~~~~~~~~~l~~~~ 241 (571)
...+..+. |+++|+ .+++++..++ ...+|.+.
T Consensus 350 ~~~~~~~v~~~~-~~~~g~~~~~~~~~~~~l~s~~~dg--~i~iw~~~ 394 (397)
T 1sq9_A 350 DSLAEPGVFDVK-FLKKGWRSGMGADLNESLCCVCLDR--SIRWFREA 394 (397)
T ss_dssp CBCSSCCEEEEE-EECTTTSBSTTCTTSCEEEEEETTT--EEEEEEEE
T ss_pred ccccCCceeEEE-eccccccccccccccceEEEecCCC--cEEEEEcC
Confidence 33455554 999983 3455555554 26666554
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.003 Score=68.80 Aligned_cols=203 Identities=14% Similarity=0.109 Sum_probs=108.4
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
....+.|||||++|+....+ + .|.+||+.+++...+..-
T Consensus 11 ~V~~l~~s~dg~~latg~~d-g-----------------------------------~I~vwd~~~~~~~~~~~l----- 49 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSD-K-----------------------------------TIKIFEVEGETHKLIDTL----- 49 (753)
T ss_dssp CEEEECCCSSSCCEEEEETT-T-----------------------------------EEEEEEEETTEEEEEEEE-----
T ss_pred eeEEEEECCCCCeEEEEECC-C-----------------------------------cEEEEecCCCCCccceec-----
Confidence 34568899999988764322 1 367788875544333221
Q ss_pred CCCCCceeEEEEEccC--CeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-CeeeccCCcccCCCCCccCCC--e-
Q 008274 104 QNYDEEYLARVNWMHG--NILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVNLHDCFTPLDKGVTKYSG--G- 177 (571)
Q Consensus 104 ~~~~~~~~~~~~wspD--g~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~~~~~~~~~~~~~~~~~d--~- 177 (571)
......+..+.|+|+ |+.++.....+. |.+.|+.+++...+...... ..+. .+ .++++ +
T Consensus 50 -~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~----I~vwd~~~~~~~~~~~~~~h~~~V~------~v----~~sp~~~~~ 114 (753)
T 3jro_A 50 -TGHEGPVWRVDWAHPKFGTILASCSYDGK----VLIWKEENGRWSQIAVHAVHSASVN------SV----QWAPHEYGP 114 (753)
T ss_dssp -CCCSSCEEEEEECCTTSCSEEEEEETTSC----EEEEEEETTEEEEEEEECCCSSCEE------EE----EECCGGGCS
T ss_pred -cCCcCceEEEEecCCCCCCEEEEEeCCCe----EEEEECCCCcccccccccCCCCCeE------EE----EECCCCCCC
Confidence 234567888999998 887777665442 77778888865444332211 1111 00 23333 3
Q ss_pred EEEEEecCCccEEEEEeCCCce---eeceeecCeEEEEEEEEee-------------cCcEEEEEEcCCCCceeEEEEEE
Q 008274 178 FIWASEKTGFRHLYLHDINGTC---LGPITEGDWMVEQIVGVNE-------------ASGQVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 178 ~~~~s~~~g~~~l~~~~~~~~~---~~~lT~~~~~~~~~~~~s~-------------dg~~l~~~~~~~~~~~~~l~~~~ 241 (571)
+++....+|. |.++++.++. ...+......+..+. |+| +++.|+..+. ++. ..+|.+.
T Consensus 115 ~l~sgs~dg~--I~vwdl~~~~~~~~~~~~~~~~~v~~l~-~~p~~~~~~~~~~~~~d~~~l~sgs~-dg~--I~iwd~~ 188 (753)
T 3jro_A 115 LLLVASSDGK--VSVVEFKENGTTSPIIIDAHAIGVNSAS-WAPATIEEDGEHNGTKESRKFVTGGA-DNL--VKIWKYN 188 (753)
T ss_dssp EEEEEETTSE--EEEEECCSSSCCCCEEEECCSSCEEEEE-ECCCC---------CGGGCCEEEEET-TSC--EEEEEEE
T ss_pred EEEEEeCCCc--EEEEEeecCCCcceeEeecCCCceEEEE-ecCcccccccccccCCCCCEEEEEEC-CCe--EEEEecc
Confidence 5555556664 5555554442 222333333455553 887 4665555544 442 6666554
Q ss_pred eCCCCCCCCCCCeEecC-CCceEEEEECCC---CCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 242 LYPDWNHTLEAPVKLTN-GKGKHVAVLDHN---MRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 242 l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~---g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
. ... .......+.. ......+.++|+ +++++.. +.. ..+.+.++.++
T Consensus 189 ~--~~~-~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~-s~D---g~I~iwd~~~~ 239 (753)
T 3jro_A 189 S--DAQ-TYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV-SQD---RTCIIWTQDNE 239 (753)
T ss_dssp T--TTT-EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE-ESS---SCEEEEEESSS
T ss_pred C--Ccc-cceeeeeecCCCCcEEEEEeccCCCCCCEEEEE-ecC---CEEEEecCCCC
Confidence 3 211 0001122222 223456689999 6665543 332 25777777554
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=97.65 E-value=0.0033 Score=59.70 Aligned_cols=153 Identities=10% Similarity=-0.014 Sum_probs=89.2
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecCC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTG 186 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g 186 (571)
...-..+.|+|++..++++.... ..|+++|.++++.+.+... .. .. .+ .+++++ +++. ..
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~---~~i~~~d~~~~~~~~~~~~-~~--~~---~i-------~~~~dG~l~v~-~~-- 72 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPA---KKVCRWDSFTKQVQRVTMD-AP--VS---SV-------ALRQSGGYVAT-IG-- 72 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTT---TEEEEEETTTCCEEEEECS-SC--EE---EE-------EEBTTSSEEEE-ET--
T ss_pred CccccCCeEECCCCEEEEEECCC---CEEEEEECCCCcEEEEeCC-Cc--eE---EE-------EECCCCCEEEE-EC--
Confidence 44566799999776665554333 2599999999886543211 11 00 00 123444 4443 32
Q ss_pred ccEEEEEeCCCceeeceeec-----CeEEEEEEEEeecCcEEEEEEcCCC-------CceeEEEEEEeCCCCCCCCCCCe
Q 008274 187 FRHLYLHDINGTCLGPITEG-----DWMVEQIVGVNEASGQVYFTGTLDG-------PLESHLYCAKLYPDWNHTLEAPV 254 (571)
Q Consensus 187 ~~~l~~~~~~~~~~~~lT~~-----~~~~~~~~~~s~dg~~l~~~~~~~~-------~~~~~l~~~~l~~~g~~~~~~~~ 254 (571)
..|++++.++++.+.+... .....+. .++++|+ +|+...... .....||+++. ++. ..
T Consensus 73 -~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di-~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~--~g~-----~~ 142 (297)
T 3g4e_A 73 -TKFCALNWKEQSAVVLATVDNDKKNNRFNDG-KVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFP--DHH-----VK 142 (297)
T ss_dssp -TEEEEEETTTTEEEEEEECCTTCSSEEEEEE-EECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECT--TSC-----EE
T ss_pred -CeEEEEECCCCcEEEEEecCCCCCCCCCCCE-EECCCCC-EEEecCCcccccccccCCCcEEEEEEC--CCC-----EE
Confidence 4699999988877766542 1223444 4899998 666553221 12468999886 442 22
Q ss_pred Eec-CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 255 KLT-NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 255 ~lt-~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.+. .........++||++.+++.-+. ...|+++++
T Consensus 143 ~~~~~~~~pngi~~spdg~~lyv~~~~---~~~i~~~~~ 178 (297)
T 3g4e_A 143 KYFDQVDISNGLDWSLDHKIFYYIDSL---SYSVDAFDY 178 (297)
T ss_dssp EEEEEESBEEEEEECTTSCEEEEEEGG---GTEEEEEEE
T ss_pred EEeeccccccceEEcCCCCEEEEecCC---CCcEEEEec
Confidence 322 22233556899999877654433 247888876
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0029 Score=61.06 Aligned_cols=138 Identities=12% Similarity=0.052 Sum_probs=78.3
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECC--CC-ce---EEEEEee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK--TG-QR---KVILVEE 153 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~--~g-~~---~~l~~~~ 153 (571)
..|+.++ +++.+.+.. .......++|+|||+.+++..... ..|+++|.+ +| +. +.+....
T Consensus 161 ~~l~~~~--~g~~~~~~~---------~~~~~~~i~~s~dg~~lyv~~~~~---~~I~~~d~~~~~Gl~~~~~~~~~~~~ 226 (326)
T 2ghs_A 161 GSIYHVA--KGKVTKLFA---------DISIPNSICFSPDGTTGYFVDTKV---NRLMRVPLDARTGLPTGKAEVFIDST 226 (326)
T ss_dssp EEEEEEE--TTEEEEEEE---------EESSEEEEEECTTSCEEEEEETTT---CEEEEEEBCTTTCCBSSCCEEEEECT
T ss_pred eEEEEEe--CCcEEEeeC---------CCcccCCeEEcCCCCEEEEEECCC---CEEEEEEcccccCCcccCceEEEECC
Confidence 4688888 466554421 112345689999998776654332 358888876 66 42 2222211
Q ss_pred cCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEe-ecCcEEEEEEcCCC-
Q 008274 154 LDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVN-EASGQVYFTGTLDG- 231 (571)
Q Consensus 154 ~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s-~dg~~l~~~~~~~~- 231 (571)
...+... ....++++-+|++... -..|+++++++...+.++.....+..+. |+ ++++.||+++...+
T Consensus 227 ~~~~~p~---------gi~~d~~G~lwva~~~-~~~v~~~d~~g~~~~~i~~~~~~~~~~a-f~g~d~~~L~vt~~~~~~ 295 (326)
T 2ghs_A 227 GIKGGMD---------GSVCDAEGHIWNARWG-EGAVDRYDTDGNHIARYEVPGKQTTCPA-FIGPDASRLLVTSAREHL 295 (326)
T ss_dssp TSSSEEE---------EEEECTTSCEEEEEET-TTEEEEECTTCCEEEEEECSCSBEEEEE-EESTTSCEEEEEEBCTTC
T ss_pred CCCCCCC---------eeEECCCCCEEEEEeC-CCEEEEECCCCCEEEEEECCCCCcEEEE-EecCCCCEEEEEecCCCC
Confidence 1111111 1123455545554432 2368999987665566655443455554 87 88899999887654
Q ss_pred --------CceeEEEEEEe
Q 008274 232 --------PLESHLYCAKL 242 (571)
Q Consensus 232 --------~~~~~l~~~~l 242 (571)
+..-.||++++
T Consensus 296 ~~~~~~~~p~~g~~~~~~~ 314 (326)
T 2ghs_A 296 DDDAITANPQHGLTFELGI 314 (326)
T ss_dssp CHHHHHHCTTTTCEEECSS
T ss_pred ChhHhccCCCCceEEEEeC
Confidence 22245777665
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0041 Score=59.28 Aligned_cols=233 Identities=12% Similarity=0.033 Sum_probs=114.3
Q ss_pred eeeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEE
Q 008274 7 VLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 86 (571)
Q Consensus 7 ~~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 86 (571)
|.+.......+ .+.+....++.|+|||+ |.++. ..... . +. ....|+++|
T Consensus 3 i~~~~~~~~~~-~~~~~~~~~~~~~~~g~-l~~~~-~~~~~---------~----------------~~--~~~~i~~~d 52 (314)
T 1pjx_A 3 IPVIEPLFTKV-TEDIPGAEGPVFDKNGD-FYIVA-PEVEV---------N----------------GK--PAGEILRID 52 (314)
T ss_dssp SCEECCCCEEE-ECCCTTCEEEEECTTSC-EEEEE-TTCEE---------T----------------TE--ECCEEEEEC
T ss_pred cccccHhHhhh-hccCCCccCceECCCCC-EEEEE-ecccc---------C----------------CC--CCCEEEEEe
Confidence 45555555544 34466678999999995 54431 10000 0 00 002578888
Q ss_pred CCCCceEEEeccCCCCCCCCCCceeEEEEEccC-CeEEEEEEeccCccEEEEEEECCCCceEEE-EEeecCCeeeccCCc
Q 008274 87 AAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHG-NILTAQVLNRSQTKLKVLKFDIKTGQRKVI-LVEELDSWVNLHDCF 164 (571)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD-g~~i~~~~~r~~~~~~i~~~d~~~g~~~~l-~~~~~~~w~~~~~~~ 164 (571)
.++++.+.+.... ..........+.+++| |++++.. ... .|+++|.+ |+.+.+ ....... ..-
T Consensus 53 ~~~g~~~~~~~~~----~~~~~~~~~~i~~~~~~g~l~v~~-~~~----~l~~~d~~-g~~~~~~~~~~~~~-----~~~ 117 (314)
T 1pjx_A 53 LKTGKKTVICKPE----VNGYGGIPAGCQCDRDANQLFVAD-MRL----GLLVVQTD-GTFEEIAKKDSEGR-----RMQ 117 (314)
T ss_dssp TTTCCEEEEECCE----ETTEECCEEEEEECSSSSEEEEEE-TTT----EEEEEETT-SCEEECCSBCTTSC-----BCB
T ss_pred CCCCcEEEEEecc----cCCCCCCCceEEEecCCCcEEEEE-CCC----CEEEEeCC-CCEEEEEeccCCCc-----ccc
Confidence 8888776553200 0001234667899999 7644432 211 49999999 876554 3211100 000
Q ss_pred ccCCCCCccCCCe-EEEEEecCC-------------ccEEEEEeCCCceeeceeecCeEEEEEEEEe----ecCcEEEEE
Q 008274 165 TPLDKGVTKYSGG-FIWASEKTG-------------FRHLYLHDINGTCLGPITEGDWMVEQIVGVN----EASGQVYFT 226 (571)
Q Consensus 165 ~~~~~~~~~~~d~-~~~~s~~~g-------------~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s----~dg~~l~~~ 226 (571)
.+ .....++++ +++.+...+ ...||+++.+ ++.+.+.........+ .++ ++|+.||+.
T Consensus 118 ~~--~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i-~~~~~~d~dg~~l~v~ 193 (314)
T 1pjx_A 118 GC--NDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGI-AVRHMNDGRPYQLIVA 193 (314)
T ss_dssp CC--CEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEE-EEEECTTSCEEEEEEE
T ss_pred CC--cCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceE-EEecccCCCCCEEEEE
Confidence 00 011234555 444433221 2579999987 4444443221112333 488 899888888
Q ss_pred EcCCCCceeEEEEEEeCCCCCCCCC-CCeEecCC--CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 227 GTLDGPLESHLYCAKLYPDWNHTLE-APVKLTNG--KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 227 ~~~~~~~~~~l~~~~l~~~g~~~~~-~~~~lt~~--~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
.... ..|+++++..++..... ....+... .......++++|+.++.... ...|++++..+++
T Consensus 194 ~~~~----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~----~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 194 ETPT----KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG----SSHIEVFGPDGGQ 258 (314)
T ss_dssp ETTT----TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET----TTEEEEECTTCBS
T ss_pred ECCC----CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC----CCEEEEEcCCCCc
Confidence 6544 34556655212210000 00111111 12344577888865443322 2367777764344
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.64 E-value=0.036 Score=53.00 Aligned_cols=115 Identities=13% Similarity=0.092 Sum_probs=67.5
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCC-CeEEEEEecCCccEE
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHL 190 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~~l 190 (571)
..+++.+.+..|+++ +... ..|.++|.++...+.+...... .|.. ...++ ++.+|+++......|
T Consensus 80 ~glavd~~~~~ly~~-d~~~--~~I~~~~~~g~~~~~~~~~~~~---------~P~~--iavdp~~g~ly~~d~~~~~~I 145 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWT-DSVL--GTVSVADTKGVKRKTLFRENGS---------KPRA--IVVDPVHGFMYWTDWGTPAKI 145 (316)
T ss_dssp CEEEEETTTTEEEEE-ETTT--TEEEEEETTSSSEEEEEECTTC---------CEEE--EEEETTTTEEEEEECSSSCEE
T ss_pred CEEEEeecCCeEEEE-ECCC--CEEEEEeCCCCceEEEEECCCC---------Ccce--EEeCCCCCEEEEEccCCCCeE
Confidence 346777655544443 3222 2589999998776666542111 0100 01233 455556665334689
Q ss_pred EEEeCCCceeeceeecCeE-EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 191 YLHDINGTCLGPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 191 ~~~~~~~~~~~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
++++++|...+.+...... ...+ .++++++.||++-... ..|+++++ +|.
T Consensus 146 ~~~~~dG~~~~~~~~~~~~~P~gl-a~d~~~~~lY~~D~~~----~~I~~~d~--dg~ 196 (316)
T 1ijq_A 146 KKGGLNGVDIYSLVTENIQWPNGI-TLDLLSGRLYWVDSKL----HSISSIDV--NGG 196 (316)
T ss_dssp EEEETTSCCEEEEECSSCSCEEEE-EEETTTTEEEEEETTT----TEEEEEET--TSC
T ss_pred EEEcCCCCCeEEEEECCCCCceEE-EEeccCCEEEEEECCC----CeEEEEec--CCC
Confidence 9999988766655433222 2344 4899999999986543 57888898 554
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0087 Score=64.41 Aligned_cols=164 Identities=12% Similarity=0.083 Sum_probs=88.6
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
.....+..+.|+|||++++..+... .|.+.|+.+++........... +. .+ .+++++ .++....
T Consensus 428 ~h~~~v~~v~~s~~g~~l~sgs~Dg----~v~vwd~~~~~~~~~~~~h~~~-v~------~~----~~s~~~~~l~s~s~ 492 (694)
T 3dm0_A 428 GHSHFVEDVVLSSDGQFALSGSWDG----ELRLWDLAAGVSTRRFVGHTKD-VL------SV----AFSLDNRQIVSASR 492 (694)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTTEEEEEEECCSSC-EE------EE----EECTTSSCEEEEET
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCC----cEEEEECCCCcceeEEeCCCCC-EE------EE----EEeCCCCEEEEEeC
Confidence 3456788899999999877665433 4888899998765433221111 10 00 233443 5555555
Q ss_pred CCccEEEEEeCCCceeeceee----cCeEEEEEEEEeecCc-EEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC
Q 008274 185 TGFRHLYLHDINGTCLGPITE----GDWMVEQIVGVNEASG-QVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG 259 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~----~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~ 259 (571)
++. |.+++..+.....+.. ....+... .|++++. .+++++..++. ..+| ++. .+. ....+...
T Consensus 493 D~~--i~iwd~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~~~l~s~s~d~~--v~vw--d~~-~~~----~~~~~~~h 560 (694)
T 3dm0_A 493 DRT--IKLWNTLGECKYTISEGGEGHRDWVSCV-RFSPNTLQPTIVSASWDKT--VKVW--NLS-NCK----LRSTLAGH 560 (694)
T ss_dssp TSC--EEEECTTSCEEEEECSSTTSCSSCEEEE-EECSCSSSCEEEEEETTSC--EEEE--ETT-TCC----EEEEECCC
T ss_pred CCE--EEEEECCCCcceeeccCCCCCCCcEEEE-EEeCCCCcceEEEEeCCCe--EEEE--ECC-CCc----EEEEEcCC
Confidence 554 4455555543333321 11124444 4888873 35555555543 4444 552 121 22333332
Q ss_pred C-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 260 K-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 260 ~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
. ....+.++|+|++++... .. ..+.+.++.+++.+..
T Consensus 561 ~~~v~~v~~spdg~~l~sg~-~D---g~i~iwd~~~~~~~~~ 598 (694)
T 3dm0_A 561 TGYVSTVAVSPDGSLCASGG-KD---GVVLLWDLAEGKKLYS 598 (694)
T ss_dssp SSCEEEEEECTTSSEEEEEE-TT---SBCEEEETTTTEEEEC
T ss_pred CCCEEEEEEeCCCCEEEEEe-CC---CeEEEEECCCCceEEE
Confidence 2 345669999998766433 32 2577778877765443
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0024 Score=63.32 Aligned_cols=119 Identities=7% Similarity=0.022 Sum_probs=64.7
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~ 185 (571)
....+..+.|+|||+.++...... .|.+.|+.+++...........-......+.. ...... +++.+ .+
T Consensus 244 ~~~~v~~~~~~~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~ 313 (408)
T 4a11_B 244 HNGKVNGLCFTSDGLHLLTVGTDN----RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTV-----SCGCSSEFVFVP-YG 313 (408)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEE-----CCSSSSCEEEEE-ET
T ss_pred ccCceeEEEEcCCCCEEEEecCCC----eEEEEECCCCccceeccccccccccccceeEE-----ecCCCceEEEEe-cC
Confidence 456788899999999877765443 38888999887543221110000000000111 112222 44443 33
Q ss_pred CccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE
Q 008274 186 GFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 186 g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 241 (571)
| .|+++++.+++. ..+......+..+ .|+|+++.|+..+. ++. ..+|.+.
T Consensus 314 ~--~i~v~d~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~~~-dg~--i~iw~~~ 364 (408)
T 4a11_B 314 S--TIAVYTVYSGEQITMLKGHYKTVDCC-VFQSNFQELYSGSR-DCN--ILAWVPS 364 (408)
T ss_dssp T--EEEEEETTTCCEEEEECCCSSCEEEE-EEETTTTEEEEEET-TSC--EEEEEEC
T ss_pred C--EEEEEECcCCcceeeeccCCCeEEEE-EEcCCCCEEEEECC-CCe--EEEEeCC
Confidence 3 678888766553 3444334445555 49999987775544 432 5666543
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.026 Score=52.35 Aligned_cols=157 Identities=11% Similarity=0.105 Sum_probs=89.5
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCC-CeEEEEEecCCcc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFR 188 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~ 188 (571)
....++|+|++..++++. ... ..|+++|.+++..+.+...... .|. ....++ ++.+++++. +..
T Consensus 37 ~~~gi~~d~~~~~ly~~d-~~~--~~I~~~~~~g~~~~~~~~~~~~---------~p~--~ia~d~~~~~lyv~d~-~~~ 101 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTD-ISE--PSIGRASLHGGEPTTIIRQDLG---------SPE--GIALDHLGRTIFWTDS-QLD 101 (267)
T ss_dssp EEEEEEEETTTTEEEEEE-TTT--TEEEEEESSSCCCEEEECTTCC---------CEE--EEEEETTTTEEEEEET-TTT
T ss_pred cEEEEEEecCCCEEEEEE-CCC--CEEEEEecCCCCcEEEEECCCC---------Ccc--EEEEEecCCeEEEEEC-CCC
Confidence 456789999876655543 332 2599999998765544321000 010 011233 234445554 345
Q ss_pred EEEEEeCCCceeeceeecC-eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec-C-CCceEEE
Q 008274 189 HLYLHDINGTCLGPITEGD-WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-N-GKGKHVA 265 (571)
Q Consensus 189 ~l~~~~~~~~~~~~lT~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt-~-~~g~~~~ 265 (571)
.|+++++++...+.+.... .....+ .++++++.||++..... ...|+++++ ++. ..+.+. . ...-...
T Consensus 102 ~I~~~~~~g~~~~~~~~~~~~~P~~i-~vd~~~g~lyv~~~~~~--~~~I~~~~~--dg~----~~~~~~~~~~~~P~gi 172 (267)
T 1npe_A 102 RIEVAKMDGTQRRVLFDTGLVNPRGI-VTDPVRGNLYWTDWNRD--NPKIETSHM--DGT----NRRILAQDNLGLPNGL 172 (267)
T ss_dssp EEEEEETTSCSCEEEECSSCSSEEEE-EEETTTTEEEEEECCSS--SCEEEEEET--TSC----CCEEEECTTCSCEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCccEE-EEeeCCCEEEEEECCCC--CcEEEEEec--CCC----CcEEEEECCCCCCcEE
Confidence 7889998876544443322 123344 48998889999865421 257888888 554 233332 1 1233556
Q ss_pred EECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 266 VLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 266 ~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
.++++++.+.+.-.. ...|+++++.
T Consensus 173 a~d~~~~~lyv~d~~---~~~I~~~~~~ 197 (267)
T 1npe_A 173 TFDAFSSQLCWVDAG---THRAECLNPA 197 (267)
T ss_dssp EEETTTTEEEEEETT---TTEEEEEETT
T ss_pred EEcCCCCEEEEEECC---CCEEEEEecC
Confidence 889988776554433 2489998874
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0026 Score=60.69 Aligned_cols=150 Identities=7% Similarity=-0.003 Sum_probs=80.7
Q ss_pred eEEEEEccCCeEEEEE-----Eec--------cCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe
Q 008274 111 LARVNWMHGNILTAQV-----LNR--------SQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG 177 (571)
Q Consensus 111 ~~~~~wspDg~~i~~~-----~~r--------~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~ 177 (571)
...+.++|||++++.- ... ......||++|.++|+.+.+. .... +. +..+++|+
T Consensus 133 ~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~---p~---------gl~~spdg 199 (305)
T 3dr2_A 133 PNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH---PN---------GLAFSPDE 199 (305)
T ss_dssp CCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS---EE---------EEEECTTS
T ss_pred CCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC---Cc---------ceEEcCCC
Confidence 3457899999854421 000 112357999999999887765 2211 00 11234554
Q ss_pred -EEEEEecC----CccEEEEEeCCCcee---eceee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCC
Q 008274 178 -FIWASEKT----GFRHLYLHDINGTCL---GPITE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNH 248 (571)
Q Consensus 178 -~~~~s~~~----g~~~l~~~~~~~~~~---~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~ 248 (571)
.+++++.. +...|++++.+++.. +.+.. .......+ .++++|+ ||+.. . ..|++++. +|.
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi-~~d~~G~-lwv~~-~-----~gv~~~~~--~g~- 268 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGF-CVDRGGW-LWSSS-G-----TGVCVFDS--DGQ- 268 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSE-EECTTSC-EEECC-S-----SEEEEECT--TSC-
T ss_pred CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeE-EECCCCC-EEEec-C-----CcEEEECC--CCC-
Confidence 45555443 136788888765431 11110 01111223 4788887 55554 1 23777776 553
Q ss_pred CCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 249 TLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 249 ~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
....+....+..++.|+++++.+.+..+. .+|.+++
T Consensus 269 ---~~~~~~~~~~~~~~~f~~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 269 ---LLGHIPTPGTASNCTFDQAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp ---EEEEEECSSCCCEEEECTTSCEEEEEETT-----EEEEEEC
T ss_pred ---EEEEEECCCceeEEEEeCCCCEEEEEcCC-----eEEEEEC
Confidence 33344433345567888888877655433 6776654
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0092 Score=58.45 Aligned_cols=73 Identities=4% Similarity=-0.015 Sum_probs=44.4
Q ss_pred cEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe-cCCCceEEE
Q 008274 188 RHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL-TNGKGKHVA 265 (571)
Q Consensus 188 ~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l-t~~~g~~~~ 265 (571)
..|+++|+.+++. ..+..+. ...+ .++|||++||.. +. ..|..+++. .+. +.....+ ..+.+-..+
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~i-a~spdg~~l~v~-n~-----~~v~v~D~~-t~~--l~~~~~i~~~G~~P~~~ 353 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSM-TIDQQRNLMLTL-DG-----GNVNVYDIS-QPE--PKLLRTIEGAAEASLQV 353 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEE-EEETTTTEEEEE-CS-----SCEEEEECS-SSS--CEEEEEETTSCSSEEEE
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEE-EECCCCCEEEEe-CC-----CeEEEEECC-CCc--ceeeEEeccCCCCcEEE
Confidence 5899999887664 4454455 5555 499999977754 43 345556763 220 0033343 334455667
Q ss_pred EECCCCC
Q 008274 266 VLDHNMR 272 (571)
Q Consensus 266 ~~s~~g~ 272 (571)
.++|+|+
T Consensus 354 ~~~p~G~ 360 (361)
T 2oiz_A 354 QFHPVGG 360 (361)
T ss_dssp EECCCSC
T ss_pred EecCCCC
Confidence 8999986
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00044 Score=64.61 Aligned_cols=113 Identities=17% Similarity=0.112 Sum_probs=72.7
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEE-ECCCCCCCChhhhHHHHhcc
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWK-LDNRGTARRGLKFEASIKHN 408 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~-~d~rG~~~~~~~~~~~~~~~ 408 (571)
..+.++++.+.. +.-+||.+||... ..+++.+.++.+.. .|.++.+.-...+.... ..
T Consensus 61 ~~~~~~v~~~~~------~~~iVva~RGT~~--------------~~d~l~d~~~~~~~~~~~~~~~~vh~Gf~~~~-~~ 119 (269)
T 1tib_A 61 GDVTGFLALDNT------NKLIVLSFRGSRS--------------IENWIGNLNFDLKEINDICSGCRGHDGFTSSW-RS 119 (269)
T ss_dssp TTEEEEEEEETT------TTEEEEEECCCSC--------------THHHHTCCCCCEEECTTTSTTCEEEHHHHHHH-HH
T ss_pred cCcEEEEEEECC------CCEEEEEEeCCCC--------------HHHHHHhcCeeeeecCCCCCCCEecHHHHHHH-HH
Confidence 346777777642 3468888999421 25788889998887 56664321111122111 11
Q ss_pred CCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC---CeeEEEEEcCccCC
Q 008274 409 CGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPVTS 469 (571)
Q Consensus 409 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~---~~~~~~v~~~~~~~ 469 (571)
..+|+.+.++.+.++. ...++.+.||||||.+|..++.... ..+.+....+|...
T Consensus 120 ----~~~~~~~~~~~~~~~~--~~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~vg 177 (269)
T 1tib_A 120 ----VADTLRQKVEDAVREH--PDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVG 177 (269)
T ss_dssp ----HHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCCCB
T ss_pred ----HHHHHHHHHHHHHHHC--CCceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCCCC
Confidence 1466777777776653 2358999999999999999887643 23677777777553
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.014 Score=55.15 Aligned_cols=201 Identities=15% Similarity=0.147 Sum_probs=99.7
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEE-eccCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWM-DLQCGGTDQ 104 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~-~~~~~~~~~ 104 (571)
..+.|||||++||-...+ + .+.+||++++..+.+ ++
T Consensus 13 ~~~~~s~~g~~las~s~D-~-----------------------------------~v~iw~~~~~~~~~~~~l------- 49 (297)
T 2pm7_B 13 HDAVMDYYGKRMATCSSD-K-----------------------------------TIKIFEVEGETHKLIDTL------- 49 (297)
T ss_dssp EEEEECTTSSEEEEEETT-S-----------------------------------CEEEEEBCSSCBCCCEEE-------
T ss_pred EEEEECCCCCEEEEEeCC-C-----------------------------------EEEEEecCCCCcEEEEEE-------
Confidence 467899999998764322 1 257778875422111 12
Q ss_pred CCCCceeEEEEEccC--CeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCeeeccCCcccCCCCCccCCC--e-E
Q 008274 105 NYDEEYLARVNWMHG--NILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVNLHDCFTPLDKGVTKYSG--G-F 178 (571)
Q Consensus 105 ~~~~~~~~~~~wspD--g~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~~~~~~~~~~~~~~~~~~d--~-~ 178 (571)
......+..+.|+|+ |+.++..+... .|.+.|+++++...+.... ....+.. + .++++ + +
T Consensus 50 ~gH~~~V~~v~~s~~~~g~~l~s~s~D~----~v~iWd~~~~~~~~~~~~~~h~~~v~~------v----~~~p~~~g~~ 115 (297)
T 2pm7_B 50 TGHEGPVWRVDWAHPKFGTILASCSYDG----KVMIWKEENGRWSQIAVHAVHSASVNS------V----QWAPHEYGPM 115 (297)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTT----EEEEEEBSSSCBCCCEEECCCSSCEEE------E----EECCGGGCSE
T ss_pred ccccCCeEEEEecCCCcCCEEEEEcCCC----EEEEEEcCCCceEEEEEeecCCCceeE------E----EeCcCCCCcE
Confidence 234567888999874 77776665433 3777788887543322211 1111110 0 22332 2 5
Q ss_pred EEEEecCCccEEEEEeCCCce---eeceeecCeEEEEEEEEeecC------------cEEEEEEcCCCCceeEEEEEEeC
Q 008274 179 IWASEKTGFRHLYLHDINGTC---LGPITEGDWMVEQIVGVNEAS------------GQVYFTGTLDGPLESHLYCAKLY 243 (571)
Q Consensus 179 ~~~s~~~g~~~l~~~~~~~~~---~~~lT~~~~~~~~~~~~s~dg------------~~l~~~~~~~~~~~~~l~~~~l~ 243 (571)
++....+|. |.++++..+. ...+......+... .|+|++ ..+++++..++. ..||.+.-
T Consensus 116 l~s~s~d~~--v~~wd~~~~~~~~~~~~~~h~~~v~~~-~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~--v~lwd~~~- 189 (297)
T 2pm7_B 116 LLVASSDGK--VSVVEFKENGTTSPIIIDAHAIGVNSA-SWAPATIEEDGEHNGTKESRKFVTGGADNL--VKIWKYNS- 189 (297)
T ss_dssp EEEEETTSE--EEEEEBCSSSCBCCEEEECCSSCEEEE-EECCCC------------CCEEEEEETTSC--EEEEEEET-
T ss_pred EEEEECCCc--EEEEEecCCCceeeeeeecccCccceE-eecCCcccccccCCCCCCcceEEEEcCCCc--EEEEEEcC-
Confidence 555555664 4444544331 12222223334444 488763 234555555543 66766542
Q ss_pred CCCCCCCCCCeEecC-CCceEEEEECCCC--CEEEEEeeCCCCCCEEEEEEcCC
Q 008274 244 PDWNHTLEAPVKLTN-GKGKHVAVLDHNM--RNFVDFHDSLDSPPRILLCSLQD 294 (571)
Q Consensus 244 ~~g~~~~~~~~~lt~-~~g~~~~~~s~~g--~~~v~~~s~~~~p~~l~~~~~~~ 294 (571)
... .......+.. ......+.|+|++ ..++.+.+... .+.+.++..
T Consensus 190 -~~~-~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~---~v~iWd~~~ 238 (297)
T 2pm7_B 190 -DAQ-TYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR---TCIIWTQDN 238 (297)
T ss_dssp -TTT-EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS---CEEEEEESS
T ss_pred -CCc-eEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC---cEEEEEeCC
Confidence 110 0000112332 2234566899985 34444444433 455555543
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.024 Score=58.97 Aligned_cols=187 Identities=10% Similarity=0.024 Sum_probs=99.0
Q ss_pred EEEEEECCCCceEE-EeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECC--CCceEEEEEeecCCe
Q 008274 81 RLGVVSAAGGPVSW-MDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK--TGQRKVILVEELDSW 157 (571)
Q Consensus 81 ~l~~~dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~--~g~~~~l~~~~~~~w 157 (571)
.|.++|.++++... +.. ......+.+||||++++.. +++. .|..+|+. +++.. .+-..+.
T Consensus 178 ~V~viD~~t~~v~~~i~~----------g~~p~~v~~SpDGr~lyv~-~~dg---~V~viD~~~~t~~~v--~~i~~G~- 240 (567)
T 1qks_A 178 QIALIDGSTYEIKTVLDT----------GYAVHISRLSASGRYLFVI-GRDG---KVNMIDLWMKEPTTV--AEIKIGS- 240 (567)
T ss_dssp EEEEEETTTCCEEEEEEC----------SSCEEEEEECTTSCEEEEE-ETTS---EEEEEETTSSSCCEE--EEEECCS-
T ss_pred eEEEEECCCCeEEEEEeC----------CCCccceEECCCCCEEEEE-cCCC---eEEEEECCCCCCcEe--EEEecCC-
Confidence 57899999987653 322 2233468999999976654 4432 59999996 65432 2211111
Q ss_pred eeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeec-eeecC-------e----EEEEEEEEeecCcEEE
Q 008274 158 VNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGP-ITEGD-------W----MVEQIVGVNEASGQVY 224 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~-lT~~~-------~----~~~~~~~~s~dg~~l~ 224 (571)
.+.+-.|+++. .+|+ ++++++.. -..+.++|..+.+... +.-+. + .+..+. .++++..++
T Consensus 241 ~P~~ia~s~~~-----~pDGk~l~v~n~~-~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~-~s~~~~~~v 313 (567)
T 1qks_A 241 EARSIETSKME-----GWEDKYAIAGAYW-PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAIL-ASHYRPEFI 313 (567)
T ss_dssp EEEEEEECCST-----TCTTTEEEEEEEE-TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEE-ECSSSSEEE
T ss_pred CCceeEEcccc-----CCCCCEEEEEEcc-CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEE-EcCCCCEEE
Confidence 01111111100 0244 55554442 2456677866654322 22110 0 123333 677777666
Q ss_pred EEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 225 FTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 225 ~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
+..... -+|..++.. .... .....+......+...|+|||++++..... -..+.++|+.+++.+..+
T Consensus 314 v~~~~~----g~v~~vd~~--~~~~-~~v~~i~~~~~~~d~~~~pdgr~~~va~~~---sn~V~ViD~~t~kl~~~i 380 (567)
T 1qks_A 314 VNVKET----GKILLVDYT--DLNN-LKTTEISAERFLHDGGLDGSHRYFITAANA---RNKLVVIDTKEGKLVAIE 380 (567)
T ss_dssp EEETTT----TEEEEEETT--CSSE-EEEEEEECCSSEEEEEECTTSCEEEEEEGG---GTEEEEEETTTTEEEEEE
T ss_pred EEecCC----CeEEEEecC--CCcc-ceeeeeeccccccCceECCCCCEEEEEeCC---CCeEEEEECCCCcEEEEE
Confidence 555322 356677762 1100 012233333445667899999987665533 247999999888755444
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=97.55 E-value=0.032 Score=54.53 Aligned_cols=105 Identities=11% Similarity=-0.006 Sum_probs=59.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEe------ccCccEEEEEEECCCCceEEEEEeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLN------RSQTKLKVLKFDIKTGQRKVILVEEL 154 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~------r~~~~~~i~~~d~~~g~~~~l~~~~~ 154 (571)
.++++|.++++.... +. .... ..+.+||||++++.... |......|..+|+++++...-.....
T Consensus 32 ~v~v~D~~t~~~~~~-i~--------~g~~-p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~ 101 (361)
T 2oiz_A 32 RVHVYDYTNGKFLGM-VP--------TAFN-GHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP 101 (361)
T ss_dssp EEEEEETTTCCEEEE-EE--------CCEE-EEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT
T ss_pred eEEEEECCCCeEEEE-ec--------CCCC-CceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc
Confidence 578999998876532 21 1122 27899999997776643 23234468999999887643222111
Q ss_pred CCeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee
Q 008274 155 DSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL 200 (571)
Q Consensus 155 ~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~ 200 (571)
..... +. .|. ....++|+ +++.++...-..|.++|+++++.
T Consensus 102 ~~~~~-g~--~p~--~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 102 KRVQG-LN--YDG--LFRQTTDGKFIVLQNASPATSIGIVDVAKGDY 143 (361)
T ss_dssp TBCCB-CC--CGG--GEEECTTSSEEEEEEESSSEEEEEEETTTTEE
T ss_pred ccccc-CC--Ccc--eEEECCCCCEEEEECCCCCCeEEEEECCCCcE
Confidence 10000 00 011 11235555 77777764446788888877653
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.04 Score=50.56 Aligned_cols=202 Identities=13% Similarity=0.123 Sum_probs=106.0
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
.+++.|.||+++|.. ..+.. ..|+.+|+++...+.+.+.
T Consensus 29 lSGla~~~~~~~L~a-V~d~~----------------------------------~~I~~ld~~g~v~~~i~l~------ 67 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFS-TINKP----------------------------------AAIVEMTTNGDLIRTIPLD------ 67 (255)
T ss_dssp EEEEEEETTTTEEEE-EEETT----------------------------------EEEEEEETTCCEEEEEECS------
T ss_pred cceeEEeCCCCEEEE-EECCC----------------------------------CeEEEEeCCCCEEEEEecC------
Confidence 688999999988844 44431 2578899985444455442
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc-eEEEEEeecC-CeeeccCCcccCCCCCccCCCe--EEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ-RKVILVEELD-SWVNLHDCFTPLDKGVTKYSGG--FIW 180 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~-~~~l~~~~~~-~w~~~~~~~~~~~~~~~~~~d~--~~~ 180 (571)
+..-...+++.+||. ++++..+.+ .|+++++.... .+.+....-+ ........|. +..+++++ ++.
T Consensus 68 --g~~D~EGIa~~~~g~-~~vs~E~~~---~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~E----GLA~d~~~~~L~v 137 (255)
T 3qqz_A 68 --FVKDLETIEYIGDNQ-FVISDERDY---AIYVISLTPNSEVKILKKIKIPLQESPTNCGFE----GLAYSRQDHTFWF 137 (255)
T ss_dssp --SCSSEEEEEECSTTE-EEEEETTTT---EEEEEEECTTCCEEEEEEEECCCSSCCCSSCCE----EEEEETTTTEEEE
T ss_pred --CCCChHHeEEeCCCE-EEEEECCCC---cEEEEEcCCCCeeeeeeeeccccccccccCCcc----eEEEeCCCCEEEE
Confidence 334566789999996 444444442 36666655433 2222222111 0000000111 22444443 555
Q ss_pred EEecCCccEEEEEe--CCCceeeceee-------cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCC
Q 008274 181 ASEKTGFRHLYLHD--INGTCLGPITE-------GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLE 251 (571)
Q Consensus 181 ~s~~~g~~~l~~~~--~~~~~~~~lT~-------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~ 251 (571)
..++ ....||.++ +.+...+.+.. .-.+...+ .++|..+.+|+.+... ..|..++. +|. ..
T Consensus 138 a~E~-~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l-~~dp~tg~lliLS~~s----~~L~~~d~--~g~--~~ 207 (255)
T 3qqz_A 138 FKEK-NPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA-EFNQQKNTLLVLSHES----RALQEVTL--VGE--VI 207 (255)
T ss_dssp EEES-SSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE-EEETTTTEEEEEETTT----TEEEEECT--TCC--EE
T ss_pred EECc-CCceEEEEcccccCCceeeecchhhccccccCCceeE-EEcCCCCeEEEEECCC----CeEEEEcC--CCC--EE
Confidence 4444 456788887 22221221110 11123444 4888889999998754 34555555 442 01
Q ss_pred CCeEecCC--------CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 252 APVKLTNG--------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 252 ~~~~lt~~--------~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
....|..+ .....+++.++|+ +|+.+. |..+|++..
T Consensus 208 ~~~~L~~g~~~l~~~~~qpEGia~d~~G~--lyIvsE---~n~~y~f~~ 251 (255)
T 3qqz_A 208 GEMSLTKGSRGLSHNIKQAEGVAMDASGN--IYIVSE---PNRFYRFTP 251 (255)
T ss_dssp EEEECSTTGGGCSSCCCSEEEEEECTTCC--EEEEET---TTEEEEEEC
T ss_pred EEEEcCCccCCcccccCCCCeeEECCCCC--EEEEcC---CceEEEEEe
Confidence 12223321 2346779999997 344455 448888764
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.53 E-value=0.029 Score=55.74 Aligned_cols=117 Identities=13% Similarity=0.087 Sum_probs=69.0
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCC-CeEEEEEecCCcc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFR 188 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~ 188 (571)
....++..+.+..|+++ +...+ .|.+++++++..+.+...... .|.. ...++ ++.+|+++.....
T Consensus 160 ~p~glavD~~~~~lY~~-d~~~~--~I~~~~~~g~~~~~l~~~~~~---------~P~~--iavdp~~g~ly~td~~~~~ 225 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWT-DSVLG--TVSVADTKGVKRKTLFRENGS---------KPRA--IVVDPVHGFMYWTDWGTPA 225 (400)
T ss_dssp CEEEEEEETTTTEEEEE-ETTTT--EEEEECTTTCSEEEEEECSSC---------CEEE--EEEETTTTEEEEEECSSSC
T ss_pred CcccEEEEecCCceEEE-ECCCC--eEEEEeCCCCceEEEEeCCCC---------Ccce--EEEecccCeEEEEeCCCCC
Confidence 34456666644444443 33322 589999998877666542111 0100 01223 3566666654346
Q ss_pred EEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 189 HLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 189 ~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
.|++++++|...+.+..... ....+ .++++++.||++-... ..|+++++ +|.
T Consensus 226 ~I~~~~~dG~~~~~~~~~~l~~P~gl-avd~~~~~lY~aD~~~----~~I~~~d~--dG~ 278 (400)
T 3p5b_L 226 KIKKGGLNGVDIYSLVTENIQWPNGI-TLDLLSGRLYWVDSKL----HSISSIDV--NGG 278 (400)
T ss_dssp CEEEEETTSCSCEEEECSSCSCEEEE-EEETTTTEEEEEETTT----TEEEEEET--TSC
T ss_pred EEEEEeCCCCccEEEEECCCCceEEE-EEEeCCCEEEEEECCC----CEEEEEeC--CCC
Confidence 79999999877666644332 22344 4899999999985432 57889998 554
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.018 Score=55.67 Aligned_cols=177 Identities=12% Similarity=0.085 Sum_probs=90.6
Q ss_pred EEEEEEECC--CCceEEEeccCCCCCCCCCCceeEEEEEcc--CCeEEEEEEecc--CccEEEEEEECCCCceEEEEEee
Q 008274 80 VRLGVVSAA--GGPVSWMDLQCGGTDQNYDEEYLARVNWMH--GNILTAQVLNRS--QTKLKVLKFDIKTGQRKVILVEE 153 (571)
Q Consensus 80 ~~l~~~dl~--~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp--Dg~~i~~~~~r~--~~~~~i~~~d~~~g~~~~l~~~~ 153 (571)
-+|+++|++ +++.+.+.+...+ +.........+...+ ||+..+++.|+. .....|+.+|.+++..+.+..-.
T Consensus 83 G~I~~~d~~~~~~~~~~l~~~g~~--~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 83 GKILLMDLNEKEPAVSELEIIGNT--LDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp CEEEEEETTSSSCCEEECEEECSS--CCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CeEEEEecCCCCCceEEEEccCCC--CCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 479999998 4566666653110 000112333445444 677444444444 34557999999887665554322
Q ss_pred cCCeeeccCCcccCCCCCccCCCe-EEEEEec---------------CCccEEEEEeCCCceeeceeecCeEEEEEEEEe
Q 008274 154 LDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK---------------TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVN 217 (571)
Q Consensus 154 ~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~---------------~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s 217 (571)
.... -++.+. ..++++ |++.... .....||+++.. +.+.+..+-.....+ .||
T Consensus 161 g~~~------~~pND~--~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGi-a~s 229 (355)
T 3sre_A 161 HKLL------PSVNDI--VAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGI-NIS 229 (355)
T ss_dssp CTTC------SSEEEE--EEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEE-EEC
T ss_pred cCCC------CCCceE--EEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcc-eEC
Confidence 2110 011110 112333 5544321 134689999873 444444332122344 499
Q ss_pred ecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECC-CCCEEE
Q 008274 218 EASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDH-NMRNFV 275 (571)
Q Consensus 218 ~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~-~g~~~v 275 (571)
||++.||++-+.. ..|+++++..+|. ....+.+.....-....+.+ +|+..+
T Consensus 230 pDg~~lYvadt~~----~~I~~~~~~~~g~--l~~~~~~~~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 230 PDGKYVYIAELLA----HKIHVYEKHANWT--LTPLRVLSFDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp TTSSEEEEEEGGG----TEEEEEEECTTSC--EEEEEEEECSSEEEEEEECTTTCCEEE
T ss_pred CCCCEEEEEeCCC----CeEEEEEECCCCc--EecCEEEeCCCCCceEEEeCCCCcEEE
Confidence 9999999997754 4677777733332 11222232122234557777 476544
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0044 Score=60.11 Aligned_cols=135 Identities=6% Similarity=0.029 Sum_probs=75.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE-EEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK-VILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~-~l~~~~~~~w~~ 159 (571)
.+.+||+.+++...+... .....+..+.|+|||++++...... .|.+.|+.+++.. ..........+.
T Consensus 150 ~i~~wd~~~~~~~~~~~~-------~~~~~i~~~~~~pdg~~lasg~~dg----~i~iwd~~~~~~~~~~~~~~h~~~v~ 218 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSA-------KSDVEYSSGVLHKDSLLLALYSPDG----ILDVYNLSSPDQASSRFPVDEEAKIK 218 (343)
T ss_dssp CEEEEESSSSCEEEEECC-------CSSCCCCEEEECTTSCEEEEECTTS----CEEEEESSCTTSCCEECCCCTTSCEE
T ss_pred cEEEEECCCCcEEEEEec-------CCCCceEEEEECCCCCEEEEEcCCC----EEEEEECCCCCCCccEEeccCCCCEE
Confidence 368899999887544321 1233477899999999777654333 3888899988754 211110111111
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee-eceee---cCeEEE-EEEEEeecCcEEEEEEcCCCCc
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL-GPITE---GDWMVE-QIVGVNEASGQVYFTGTLDGPL 233 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~-~~lT~---~~~~~~-~~~~~s~dg~~l~~~~~~~~~~ 233 (571)
. ..+++++ +++.+. ++ .|.++|+..++. ..+.. ....+. ....|+|+|++|+..+..++
T Consensus 219 ------~----l~fs~~g~~l~s~~-~~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~-- 283 (343)
T 3lrv_A 219 ------E----VKFADNGYWMVVEC-DQ--TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN-- 283 (343)
T ss_dssp ------E----EEECTTSSEEEEEE-SS--BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT--
T ss_pred ------E----EEEeCCCCEEEEEe-CC--eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCC--
Confidence 0 1234555 444444 44 688888766532 22221 222222 12459999998887665344
Q ss_pred eeEEEEEE
Q 008274 234 ESHLYCAK 241 (571)
Q Consensus 234 ~~~l~~~~ 241 (571)
...+|.++
T Consensus 284 ~i~v~~~~ 291 (343)
T 3lrv_A 284 SLTIYKFD 291 (343)
T ss_dssp EEEEEEEC
T ss_pred cEEEEEEc
Confidence 36777664
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.02 Score=55.73 Aligned_cols=184 Identities=13% Similarity=0.150 Sum_probs=106.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+.+++++.+...+.. .......+.|.+++..|+++ +..+ ..|++++++++..+.+......
T Consensus 54 ~I~~i~~~g~~~~~~~~---------~~~~~~~l~~d~~~~~ly~~-D~~~--~~I~r~~~~g~~~~~~~~~~~~----- 116 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLN---------NLENAIALDFHHRRELVFWS-DVTL--DRILRANLNGSNVEEVVSTGLE----- 116 (349)
T ss_dssp CEEEECTTSCCEEEEEC---------SCSCEEEEEEETTTTEEEEE-ETTT--TEEEEEETTSCSCEEEECSSCS-----
T ss_pred ceEEEeCCCCeeEEeec---------CCCceEEEEEeccccEEEEE-eccC--CceEEEecCCCCceEEEeCCCC-----
Confidence 36777888766554422 23345678999876655444 3332 2599999998876655331100
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
.|......|..+.++| ++. +...|+++++++...+.+..... ....+ .++|+++.||++-... ...|++
T Consensus 117 ----~p~glavd~~~g~ly~-~d~-~~~~I~~~~~dG~~~~~l~~~~l~~P~~i-avdp~~g~ly~td~~~---~~~I~r 186 (349)
T 3v64_C 117 ----SPGGLAVDWVHDKLYW-TDS-GTSRIEVANLDGAHRKVLLWQSLEKPRAI-ALHPMEGTIYWTDWGN---TPRIEA 186 (349)
T ss_dssp ----CCCEEEEETTTTEEEE-EET-TTTEEEEEETTSCSCEEEECTTCSCEEEE-EEETTTTEEEEEECSS---SCEEEE
T ss_pred ----CccEEEEecCCCeEEE-EcC-CCCeEEEEcCCCCceEEEEeCCCCCcceE-EEecCcCeEEEeccCC---CCEEEE
Confidence 0100000122333444 343 34579999998876555544332 23444 4898899999986544 267999
Q ss_pred EEeCCCCCCCCCCCeEecCC--CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 240 AKLYPDWNHTLEAPVKLTNG--KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~~--~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
+++ +|. ..+.+... ..-...+++++++.+.++= . ....|+++++ ++...+.+
T Consensus 187 ~~~--dG~----~~~~~~~~~~~~PnGla~d~~~~~lY~aD-~--~~~~I~~~~~-dG~~~~~~ 240 (349)
T 3v64_C 187 SSM--DGS----GRRIIADTHLFWPNGLTIDYAGRRMYWVD-A--KHHVIERANL-DGSHRKAV 240 (349)
T ss_dssp EET--TSC----SCEESCCSSCSCEEEEEEETTTTEEEEEE-T--TTTEEEEEET-TSCSCEEE
T ss_pred EeC--CCC----CcEEEEECCCCCcceEEEeCCCCEEEEEE-C--CCCEEEEEeC-CCCceEEE
Confidence 998 664 33344221 2235568998777776653 2 2358999997 44433333
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0023 Score=62.27 Aligned_cols=57 Identities=4% Similarity=-0.129 Sum_probs=38.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR 146 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~ 146 (571)
.|.+||+.+++....-.. +......+..+.|+|||+.++...... .|.+.|+.+++.
T Consensus 139 ~i~iwd~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~ 195 (366)
T 3k26_A 139 ALRLWNIQTDTLVAIFGG-----VEGHRDEVLSADYDLLGEKIMSCGMDH----SLKLWRINSKRM 195 (366)
T ss_dssp CEEEEETTTTEEEEEECS-----TTSCSSCEEEEEECTTSSEEEEEETTS----CEEEEESCSHHH
T ss_pred eEEEEEeecCeEEEEecc-----cccccCceeEEEECCCCCEEEEecCCC----CEEEEECCCCcc
Confidence 368899998876544210 012456788899999999777665433 388888887653
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00084 Score=68.17 Aligned_cols=115 Identities=17% Similarity=0.082 Sum_probs=74.8
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh-ccCCC----CCchhHHHHHHH
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK-HNCGR----IDAEDQLTGAEW 423 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~-~~~~~----~~~~D~~~~~~~ 423 (571)
-|++|++-|..... .+......+.+...+.|-.+|...+|-.|.|-.--..... .++.- ..+.|+...+++
T Consensus 43 gPIfl~~gGEg~~~----~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~ 118 (472)
T 4ebb_A 43 GPIFFYTGNEGDVW----AFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRA 118 (472)
T ss_dssp CCEEEEECCSSCHH----HHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCcccc----ccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHH
Confidence 58888885532211 1111111234455578999999999976655321000010 12211 136788888888
Q ss_pred HHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCcc
Q 008274 424 LIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV 467 (571)
Q Consensus 424 l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~ 467 (571)
+.........+++++|.||||.+|.++-.++|++|.++++.+++
T Consensus 119 ~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSAp 162 (472)
T 4ebb_A 119 LRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAP 162 (472)
T ss_dssp HHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCC
T ss_pred HHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccc
Confidence 87764455679999999999999999999999999888886654
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.053 Score=53.98 Aligned_cols=104 Identities=13% Similarity=-0.040 Sum_probs=59.5
Q ss_pred EEEEEECCCCceE-EEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEe---c---cCccEEEEEEECCCCceEE-EEEe
Q 008274 81 RLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLN---R---SQTKLKVLKFDIKTGQRKV-ILVE 152 (571)
Q Consensus 81 ~l~~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~---r---~~~~~~i~~~d~~~g~~~~-l~~~ 152 (571)
.|.++|+++++.. .+.. +... .+.+||||+.++.... | ......|..+|.++++... |.-.
T Consensus 100 ~VsVID~~t~~vv~~I~v---------G~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~ 168 (426)
T 3c75_H 100 QQFVIDGSTGRILGMTDG---------GFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELP 168 (426)
T ss_dssp EEEEEETTTTEEEEEEEE---------CSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET
T ss_pred eEEEEECCCCEEEEEEEC---------CCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECC
Confidence 6899999998765 3333 1222 6899999996655532 1 1123469999999998643 3221
Q ss_pred ecCCeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee
Q 008274 153 ELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL 200 (571)
Q Consensus 153 ~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~ 200 (571)
....+... ..+.....++|+ .+|+++...-..|.++|+.+.+.
T Consensus 169 g~~r~~~g-----~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 169 DAPRFLVG-----TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF 212 (426)
T ss_dssp TCCCCCBS-----CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred CccccccC-----CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE
Confidence 01111000 001111335555 67776654456788999877653
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0033 Score=63.26 Aligned_cols=159 Identities=11% Similarity=0.032 Sum_probs=85.1
Q ss_pred CceeEEEEEccCCe-EEEEEEeccCccEEEEEEECCCCce--EEE---EEe-ecCCeeeccCCcccCCCCCccCC-Ce-E
Q 008274 108 EEYLARVNWMHGNI-LTAQVLNRSQTKLKVLKFDIKTGQR--KVI---LVE-ELDSWVNLHDCFTPLDKGVTKYS-GG-F 178 (571)
Q Consensus 108 ~~~~~~~~wspDg~-~i~~~~~r~~~~~~i~~~d~~~g~~--~~l---~~~-~~~~w~~~~~~~~~~~~~~~~~~-d~-~ 178 (571)
...+..+.|+|+++ .++...... .|.+.|+.++.. ..+ ... .....+. .+ .|++ ++ +
T Consensus 181 ~~~v~~l~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~------~v----~~~p~~~~~ 246 (430)
T 2xyi_A 181 QKEGYGLSWNPNLNGYLLSASDDH----TICLWDINATPKEHRVIDAKNIFTGHTAVVE------DV----AWHLLHESL 246 (430)
T ss_dssp SSCCCCEEECTTSTTEEEEECTTS----CEEEEETTSCCBGGGEEECSEEECCCSSCEE------EE----EECSSCTTE
T ss_pred CCCeEEEEeCCCCCCeEEEEeCCC----eEEEEeCCCCCCCCceeccceeecCCCCCEe------ee----EEeCCCCCE
Confidence 34566789999998 666554333 378888887432 111 100 0000010 00 2333 22 5
Q ss_pred EEEEecCCccEEEEEeCCCc----eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCe
Q 008274 179 IWASEKTGFRHLYLHDINGT----CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPV 254 (571)
Q Consensus 179 ~~~s~~~g~~~l~~~~~~~~----~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~ 254 (571)
++....+| .|+++++..+ ....+......+..+ .|+|+++.+++++..++ .|..+++...+. ...
T Consensus 247 l~s~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~i-~~~p~~~~~l~tg~~dg----~v~vwd~~~~~~----~~~ 315 (430)
T 2xyi_A 247 FGSVADDQ--KLMIWDTRNNNTSKPSHTVDAHTAEVNCL-SFNPYSEFILATGSADK----TVALWDLRNLKL----KLH 315 (430)
T ss_dssp EEEEETTS--EEEEEETTCSCSSSCSEEEECCSSCEEEE-EECSSCTTEEEEEETTS----EEEEEETTCTTS----CSE
T ss_pred EEEEeCCC--eEEEEECCCCCCCcceeEeecCCCCeEEE-EeCCCCCCEEEEEeCCC----eEEEEeCCCCCC----CeE
Confidence 54444444 4667776554 222332333345555 49999998888887765 244455521121 233
Q ss_pred EecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCC
Q 008274 255 KLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 294 (571)
Q Consensus 255 ~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~ 294 (571)
.+.. ......+.++|+++.++++.+... .+.+.++..
T Consensus 316 ~~~~h~~~v~~i~~sp~~~~~l~s~~~d~---~i~iwd~~~ 353 (430)
T 2xyi_A 316 SFESHKDEIFQVQWSPHNETILASSGTDR---RLHVWDLSK 353 (430)
T ss_dssp EEECCSSCEEEEEECSSCTTEEEEEETTS---CCEEEEGGG
T ss_pred EeecCCCCEEEEEECCCCCCEEEEEeCCC---cEEEEeCCC
Confidence 4443 334556799999987666665433 567777644
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.007 Score=58.42 Aligned_cols=181 Identities=7% Similarity=-0.036 Sum_probs=97.4
Q ss_pred EEEEEECCCCceE-EEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|.++|.++++.. .+.. ......+.+++||+ + ++++.. ...|+++|+++++..........
T Consensus 65 ~v~viD~~t~~~~~~i~~----------~~~p~~i~~~~~g~-l-yv~~~~--~~~v~~iD~~t~~~~~~i~~g~~---- 126 (328)
T 3dsm_A 65 VIFAIDINTFKEVGRITG----------FTSPRYIHFLSDEK-A-YVTQIW--DYRIFIINPKTYEITGYIECPDM---- 126 (328)
T ss_dssp EEEEEETTTCCEEEEEEC----------CSSEEEEEEEETTE-E-EEEEBS--CSEEEEEETTTTEEEEEEECTTC----
T ss_pred EEEEEECcccEEEEEcCC----------CCCCcEEEEeCCCe-E-EEEECC--CCeEEEEECCCCeEEEEEEcCCc----
Confidence 5788999988763 3421 22345578899995 3 333321 22599999999976432221110
Q ss_pred ccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCc-----
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPL----- 233 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~----- 233 (571)
....-.|. .... .++.+++++...-..|+++|+.+++. ..+..+. ....+ .++++|+ +|+........
T Consensus 127 ~~~~~~p~--~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i-~~~~dG~-l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 127 DMESGSTE--QMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSL-VMDKYNK-MWTITDGGYEGSPYGY 200 (328)
T ss_dssp CTTTCBCC--CEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCC-EECTTSE-EEEEBCCBCTTCSSCB
T ss_pred cccCCCcc--eEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-Cccce-EEcCCCC-EEEEECCCccCCcccc
Confidence 00000011 1112 23344445432134799999887664 3343332 12233 3788886 66666533100
Q ss_pred -eeEEEEEEeCCCCCCCCCCCeEecC--CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 234 -ESHLYCAKLYPDWNHTLEAPVKLTN--GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 234 -~~~l~~~~l~~~g~~~~~~~~~lt~--~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
...|++++. ... + ....+.- +.......++||++.+.+. .+ .+++++..+++
T Consensus 201 ~~~~v~~id~--~t~-~--v~~~~~~~~g~~p~~la~~~d~~~lyv~-~~-----~v~~~d~~t~~ 255 (328)
T 3dsm_A 201 EAPSLYRIDA--ETF-T--VEKQFKFKLGDWPSEVQLNGTRDTLYWI-NN-----DIWRMPVEADR 255 (328)
T ss_dssp CCCEEEEEET--TTT-E--EEEEEECCTTCCCEEEEECTTSCEEEEE-SS-----SEEEEETTCSS
T ss_pred CCceEEEEEC--CCC-e--EEEEEecCCCCCceeEEEecCCCEEEEE-cc-----EEEEEECCCCc
Confidence 257999997 322 1 1223322 2335667999999876554 22 78999986665
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.024 Score=54.55 Aligned_cols=196 Identities=9% Similarity=0.037 Sum_probs=101.0
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc--eEEEEEeecCCe
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ--RKVILVEELDSW 157 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~--~~~l~~~~~~~w 157 (571)
..|+++|.++|+.....- ...-.....++++|||+++ ++ +... ..|+++|.++.. ...+......+.
T Consensus 69 ~~i~~~d~~~g~~~~~~~-------~~~~~~p~gia~d~~g~l~-v~-d~~~--~~v~~~~~~g~~~~~~~~~~~~~~g~ 137 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSG-------KNLFYLPHGLSIDTDGNYW-VT-DVAL--HQVFKLDPHSKEGPLLILGRSMQPGS 137 (329)
T ss_dssp CCEEEECTTTCCEEEEEC-------TTTCSSEEEEEECTTSCEE-EE-ETTT--TEEEEECTTCSSCCSEEESBTTBCCC
T ss_pred CcEEEEECCCCeEEeccC-------CCccCCceEEEECCCCCEE-EE-ECCC--CEEEEEeCCCCeEEEEEecccCCCCC
Confidence 368999999888654321 1122345678999999833 33 2221 259999987663 333311000000
Q ss_pred eeccCCcccCCCCCccCC-CeEEEEEecCCccEEEEEeCCCceeeceeec---------CeE-EEEEEEEeecCcEEEEE
Q 008274 158 VNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPITEG---------DWM-VEQIVGVNEASGQVYFT 226 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~---------~~~-~~~~~~~s~dg~~l~~~ 226 (571)
. ......|. ....++ ++-+++++..+...|++++.++.....+... .+. ...+ .++++++.||++
T Consensus 138 ~-~~~~~~P~--~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gi-a~d~~~g~l~v~ 213 (329)
T 3fvz_A 138 D-QNHFCQPT--DVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSL-ALVPHLDQLCVA 213 (329)
T ss_dssp S-TTCCSSEE--EEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEE-EEETTTTEEEEE
T ss_pred C-ccccCCCc--EEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEE-EEECCCCEEEEE
Confidence 0 00000111 123455 5655556543456788998777655555321 111 2334 488887788888
Q ss_pred EcCCCCceeEEEEEEeCCCCCCCCCCCeEecC---CCceEEEEECCCCCEEEEEee----CCCCCCEEEEEEcCCCceeE
Q 008274 227 GTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN---GKGKHVAVLDHNMRNFVDFHD----SLDSPPRILLCSLQDGSLVL 299 (571)
Q Consensus 227 ~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~---~~g~~~~~~s~~g~~~v~~~s----~~~~p~~l~~~~~~~~~~~~ 299 (571)
....+ .|.++++. +|. ....+.. ........++| + .++..-. .......+++++..+++.+.
T Consensus 214 d~~~~----~I~~~~~~-~G~----~~~~~~~~~~~~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 214 DRENG----RIQCFKTD-TKE----FVREIKHASFGRNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp ETTTT----EEEEEETT-TCC----EEEEECCTTTTTCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEE
T ss_pred ECCCC----EEEEEECC-CCc----EEEEEeccccCCCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEE
Confidence 65543 56677762 143 2333321 22344556777 3 2222211 11234478888877777655
Q ss_pred ec
Q 008274 300 PL 301 (571)
Q Consensus 300 ~l 301 (571)
.+
T Consensus 283 ~~ 284 (329)
T 3fvz_A 283 VF 284 (329)
T ss_dssp EE
T ss_pred EE
Confidence 44
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.027 Score=54.89 Aligned_cols=80 Identities=11% Similarity=0.015 Sum_probs=45.3
Q ss_pred ceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec---CCCceEEEEECCCCCEEEEEe
Q 008274 202 PITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT---NGKGKHVAVLDHNMRNFVDFH 278 (571)
Q Consensus 202 ~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt---~~~g~~~~~~s~~g~~~v~~~ 278 (571)
.+......+..+ .|+|+|++|+-.+. ++ . .+...++. .+. ....+. .......+.|+|+|++++...
T Consensus 190 ~~~~h~~~v~~~-~~s~~g~~l~s~s~-d~--~-~v~iwd~~-~~~----~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 190 LIKAHTNPIKMV-RLNRKSDMVATCSQ-DG--T-IIRVFKTE-DGV----LVREFRRGLDRADVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp EECCCSSCEEEE-EECTTSSEEEEEET-TC--S-EEEEEETT-TCC----EEEEEECTTCCSCEEEEEECTTSCEEEEEE
T ss_pred EEEccCCceEEE-EECCCCCEEEEEeC-CC--C-EEEEEECC-CCc----EEEEEEcCCCCCcEEEEEECCCCCEEEEEE
Confidence 343334445555 49999987665543 33 1 14444552 232 334444 233456679999999876543
Q ss_pred eCCCCCCEEEEEEcCCC
Q 008274 279 DSLDSPPRILLCSLQDG 295 (571)
Q Consensus 279 s~~~~p~~l~~~~~~~~ 295 (571)
.. ..+.+.++..+
T Consensus 260 ~d----~~v~iw~~~~~ 272 (355)
T 3vu4_A 260 DK----WTLHVFEIFND 272 (355)
T ss_dssp TT----CEEEEEESSCC
T ss_pred CC----CEEEEEEccCC
Confidence 32 36778887554
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.013 Score=57.98 Aligned_cols=184 Identities=13% Similarity=0.157 Sum_probs=105.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+.+++++++...+.. .......+.|.+++..|+++ +..++ .|++++++++..+.+......
T Consensus 97 ~I~~i~~~~~~~~~~~~---------~~~~~~gl~~d~~~~~ly~~-D~~~~--~I~r~~~~g~~~~~~~~~~~~----- 159 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLN---------NLENAIALDFHHRRELVFWS-DVTLD--RILRANLNGSNVEEVVSTGLE----- 159 (386)
T ss_dssp CEEEECTTSCCCEEEEC---------SCSCEEEEEEETTTTEEEEE-ETTTT--EEEEEETTSCCEEEEECSSCS-----
T ss_pred cceeeccCCCcEEEEec---------CCCccEEEEEecCCCeEEEE-eCCCC--cEEEEecCCCCcEEEEeCCCC-----
Confidence 46777887766554422 23346678999866555444 33322 599999998876655331100
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
.|......|..+.++| ++. +...|+++++++...+.+..... ....+ .++|+++.||++-... ...|++
T Consensus 160 ----~p~glavd~~~g~lY~-~d~-~~~~I~~~~~dg~~~~~l~~~~l~~P~gi-avdp~~g~ly~td~~~---~~~I~r 229 (386)
T 3v65_B 160 ----SPGGLAVDWVHDKLYW-TDS-GTSRIEVANLDGAHRKVLLWQSLEKPRAI-ALHPMEGTIYWTDWGN---TPRIEA 229 (386)
T ss_dssp ----CCCCEEEETTTTEEEE-EET-TTTEEEECBTTSCSCEEEECSSCSCEEEE-EEETTTTEEEEEECSS---SCEEEE
T ss_pred ----CccEEEEEeCCCeEEE-EcC-CCCeEEEEeCCCCceEEeecCCCCCCcEE-EEEcCCCeEEEeccCC---CCEEEE
Confidence 0110000122333444 443 24578899988876555544332 23444 3898899999986543 267999
Q ss_pred EEeCCCCCCCCCCCeEecCC--CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 240 AKLYPDWNHTLEAPVKLTNG--KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~~--~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
+++ +|. ..+.+... ..-...+++++++.+.++= . ....|+++++ ++...+.+
T Consensus 230 ~~~--dG~----~~~~~~~~~~~~PnGlavd~~~~~lY~aD-~--~~~~I~~~d~-dG~~~~~~ 283 (386)
T 3v65_B 230 SSM--DGS----GRRIIADTHLFWPNGLTIDYAGRRMYWVD-A--KHHVIERANL-DGSHRKAV 283 (386)
T ss_dssp EET--TSC----SCEEEECSSCSCEEEEEEEGGGTEEEEEE-T--TTTEEEEECT-TSCSCEEE
T ss_pred EeC--CCC----CcEEEEECCCCCeeeEEEeCCCCEEEEEE-C--CCCEEEEEeC-CCCeeEEE
Confidence 998 664 33343322 2234568888777766643 2 2348998887 44433333
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.04 Score=52.69 Aligned_cols=184 Identities=10% Similarity=0.015 Sum_probs=101.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC----CceEEEEEeecCC
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT----GQRKVILVEELDS 156 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~----g~~~~l~~~~~~~ 156 (571)
.|..+|+++++...+-. .......+.|.+++..++++. ... ..|+++++++ +..+.+....
T Consensus 11 ~I~~i~~~~~~~~~~~~---------~~~~p~g~~~d~~~~~ly~~D-~~~--~~I~~~~~~g~~~~~~~~~~~~~~--- 75 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIP---------NLRNVVALDTEVASNRIYWSD-LSQ--RMICSTQLDRAHGVSSYDTVISRD--- 75 (316)
T ss_dssp SEEEEETTSCCCEEEEC---------SCSSEEEEEEETTTTEEEEEE-TTT--TEEEEEEC--------CEEEECSS---
T ss_pred eEEEEECCCcceEehhc---------CCCceEEEEEEeCCCEEEEEE-CCC--CcEEEEECCCCCCCcccEEEEeCC---
Confidence 46788998876655421 233456789998766554443 332 2599999987 2223332110
Q ss_pred eeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecC-eEEEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 157 WVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGD-WMVEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
. -.|......|..+.+++. +. +...|.++++++...+.+.... .....+ .++|+++.||++.... ..
T Consensus 76 ~------~~p~glavd~~~~~ly~~-d~-~~~~I~~~~~~g~~~~~~~~~~~~~P~~i-avdp~~g~ly~~d~~~---~~ 143 (316)
T 1ijq_A 76 I------QAPDGLAVDWIHSNIYWT-DS-VLGTVSVADTKGVKRKTLFRENGSKPRAI-VVDPVHGFMYWTDWGT---PA 143 (316)
T ss_dssp C------SCCCEEEEETTTTEEEEE-ET-TTTEEEEEETTSSSEEEEEECTTCCEEEE-EEETTTTEEEEEECSS---SC
T ss_pred C------CCcCEEEEeecCCeEEEE-EC-CCCEEEEEeCCCCceEEEEECCCCCcceE-EeCCCCCEEEEEccCC---CC
Confidence 0 001000001223335543 33 3457889998887655554422 223444 3898889999986432 25
Q ss_pred EEEEEEeCCCCCCCCCCCeEecC--CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTN--GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~--~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.|+++++ +|. ..+.+.. ...-...+++++++.+.+.-+. ...|+++++. ++..+.+
T Consensus 144 ~I~~~~~--dG~----~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~---~~~I~~~d~d-g~~~~~~ 201 (316)
T 1ijq_A 144 KIKKGGL--NGV----DIYSLVTENIQWPNGITLDLLSGRLYWVDSK---LHSISSIDVN-GGNRKTI 201 (316)
T ss_dssp EEEEEET--TSC----CEEEEECSSCSCEEEEEEETTTTEEEEEETT---TTEEEEEETT-SCSCEEE
T ss_pred eEEEEcC--CCC----CeEEEEECCCCCceEEEEeccCCEEEEEECC---CCeEEEEecC-CCceEEE
Confidence 7999998 664 2333322 2233456889888777665332 3589999984 5444444
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.059 Score=50.79 Aligned_cols=178 Identities=8% Similarity=0.024 Sum_probs=85.9
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccC--CeEEEEEEeccCccEEEEEEECCCCce---EEEEEeecC
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHG--NILTAQVLNRSQTKLKVLKFDIKTGQR---KVILVEELD 155 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD--g~~i~~~~~r~~~~~~i~~~d~~~g~~---~~l~~~~~~ 155 (571)
.+.+||+++++...+... ......+..+.|+|| |+.++...... .|.+.|+.++.. ..+..+...
T Consensus 78 ~v~iWd~~~~~~~~~~~~------~~h~~~v~~v~~~p~~~g~~l~s~s~d~----~v~~wd~~~~~~~~~~~~~~h~~~ 147 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVH------AVHSASVNSVQWAPHEYGPMLLVASSDG----KVSVVEFKENGTTSPIIIDAHAIG 147 (297)
T ss_dssp EEEEEEBSSSCBCCCEEE------CCCSSCEEEEEECCGGGCSEEEEEETTS----EEEEEEBCSSSCBCCEEEECCSSC
T ss_pred EEEEEEcCCCceEEEEEe------ecCCCceeEEEeCcCCCCcEEEEEECCC----cEEEEEecCCCceeeeeeecccCc
Confidence 477889987743221110 223456888999998 77666554332 377777776531 122111111
Q ss_pred CeeeccCCcccCCCC----CccCC-CeEEEEEecCCccEEEEEeCCCce---eeceeecCeEEEEEEEEeecC--cEEEE
Q 008274 156 SWVNLHDCFTPLDKG----VTKYS-GGFIWASEKTGFRHLYLHDINGTC---LGPITEGDWMVEQIVGVNEAS--GQVYF 225 (571)
Q Consensus 156 ~w~~~~~~~~~~~~~----~~~~~-d~~~~~s~~~g~~~l~~~~~~~~~---~~~lT~~~~~~~~~~~~s~dg--~~l~~ 225 (571)
+.. -.|.|.... ..... ..+++....+|.-.||-+...... ...|......+..+. |+|++ ..++.
T Consensus 148 --v~~-~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~-~sp~~~~~~~la 223 (297)
T 2pm7_B 148 --VNS-ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA-WSPTVLLRSYMA 223 (297)
T ss_dssp --EEE-EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE-ECCCCSSSEEEE
T ss_pred --cce-EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEE-ECCCCCCceEEE
Confidence 100 012221000 00001 135666666676666655432221 123333333455554 99986 45556
Q ss_pred EEcCCCCceeEEEEEEeCCCCCCCCCCCeEec---CCCceEEEEECCCCCEEEEEe
Q 008274 226 TGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT---NGKGKHVAVLDHNMRNFVDFH 278 (571)
Q Consensus 226 ~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt---~~~g~~~~~~s~~g~~~v~~~ 278 (571)
++..++. ..||.++. ... . .....+. .......+.|+|+|++++...
T Consensus 224 s~s~D~~--v~iWd~~~--~~~-~-~~~~~~~~~~~~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 224 SVSQDRT--CIIWTQDN--EQG-P-WKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp EEETTSC--EEEEEESS--TTS-C-CEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred EEECCCc--EEEEEeCC--CCC-c-cceeeeecccCCCcEEEEEECCCCCEEEEEc
Confidence 6665553 66665432 111 0 0111221 122345679999998876543
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.025 Score=53.43 Aligned_cols=178 Identities=10% Similarity=0.022 Sum_probs=93.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEEee-cCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEE-LDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~~~-~~~w~ 158 (571)
.|.+||+.+++...... .....+..+.|+||++.++....... |...++..... +.+.... ....+
T Consensus 40 ~v~vw~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~dg~----i~~~~~~~~~~~~~~~~~~~~~~~i 107 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVY--------TGQGFLNSVCYDSEKELLLFGGKDTM----INGVPLFATSGEDPLYTLIGHQGNV 107 (313)
T ss_dssp EEEEEEESSSEEEEEEE--------ECSSCEEEEEEETTTTEEEEEETTSC----EEEEETTCCTTSCC-CEECCCSSCE
T ss_pred cEEEEECCCCEEEEEee--------cCCccEEEEEECCCCCEEEEecCCCe----EEEEEeeecCCCCcccchhhcccCE
Confidence 46888998876544322 24567888999999998777654432 66666655321 1111111 00111
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEee-cCcEEEEEEcCCCCceeEE
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNE-ASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~l 237 (571)
. .+ .+++ .+++....+|. |.+++ .+.....+......+.... +++ +++.++..+. ++. ..+
T Consensus 108 ~------~~----~~~~-~~l~~~~~d~~--i~~~d-~~~~~~~~~~~~~~v~~~~-~~~~~~~~l~~~~~-d~~--i~i 169 (313)
T 3odt_A 108 C------SL----SFQD-GVVISGSWDKT--AKVWK-EGSLVYNLQAHNASVWDAK-VVSFSENKFLTASA-DKT--IKL 169 (313)
T ss_dssp E------EE----EEET-TEEEEEETTSE--EEEEE-TTEEEEEEECCSSCEEEEE-EEETTTTEEEEEET-TSC--EEE
T ss_pred E------EE----EecC-CEEEEEeCCCC--EEEEc-CCcEEEecccCCCceeEEE-EccCCCCEEEEEEC-CCC--EEE
Confidence 0 00 1222 35555555554 44555 3444444544444455554 566 7776665554 332 455
Q ss_pred EEEEeCCCCCCCCCCCeEecC--CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 238 YCAKLYPDWNHTLEAPVKLTN--GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~--~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
|. . .. ....+.. ........++++++ ++. .+. -..+.++++.+++.+..+.
T Consensus 170 ~d--~--~~-----~~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~---dg~i~i~d~~~~~~~~~~~ 222 (313)
T 3odt_A 170 WQ--N--DK-----VIKTFSGIHNDVVRHLAVVDDGH-FIS-CSN---DGLIKLVDMHTGDVLRTYE 222 (313)
T ss_dssp EE--T--TE-----EEEEECSSCSSCEEEEEEEETTE-EEE-EET---TSEEEEEETTTCCEEEEEE
T ss_pred Ee--c--Cc-----eEEEEeccCcccEEEEEEcCCCe-EEE-ccC---CCeEEEEECCchhhhhhhh
Confidence 43 3 11 2223332 22345568899987 433 322 2378899988777666554
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=97.31 E-value=0.088 Score=50.26 Aligned_cols=184 Identities=14% Similarity=0.085 Sum_probs=93.2
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.+++...+....... ..........++++++.++...... .+...|..+.....+........+..
T Consensus 109 ~i~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~s~s~d~----~~~~~d~~~~~~~~~~~~~~~~~v~~ 176 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFV--------GHTKDVLSVAFSSDNRQIVSGSRDK----TIKLWNTLGVCKYTVQDESHSEWVSC 176 (340)
T ss_dssp EEEEEETTTTEEEEEEE--------CCSSCEEEEEECTTSSCEEEEETTS----CEEEECTTSCEEEEECSSSCSSCEEE
T ss_pred cceEEeecccceeeeec--------CCCCceeEEEEeecCccceeecCCC----eEEEEEeCCCceEEEEeccccCcccc
Confidence 35677777765544332 2344556678999998776654333 26667777654332221111111100
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceee-ceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLG-PITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~-~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
..|.+. ....+++....++ .|.+++..+++.. .+......+..+ .|+|+++.|+..+. ++ .+..
T Consensus 177 -~~~~~~------~~~~~~~s~~~d~--~i~i~d~~~~~~~~~~~~h~~~v~~~-~~s~~~~~l~s~s~-Dg----~i~i 241 (340)
T 4aow_A 177 -VRFSPN------SSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNTV-TVSPDGSLCASGGK-DG----QAML 241 (340)
T ss_dssp -EEECSC------SSSCEEEEEETTS--CEEEEETTTTEEEEEECCCSSCEEEE-EECTTSSEEEEEET-TC----EEEE
T ss_pred -eEEccC------CCCcEEEEEcCCC--EEEEEECCCCceeeEecCCCCcEEEE-EECCCCCEEEEEeC-CC----eEEE
Confidence 011110 1122444444444 3666676665543 333333345555 49999987665543 33 3444
Q ss_pred EEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 240 AKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.++. ... ....+..........++|++..++.. .. ..+.+.++..+..+..+
T Consensus 242 wd~~-~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~-~d----~~i~iwd~~~~~~~~~~ 293 (340)
T 4aow_A 242 WDLN-EGK----HLYTLDGGDIINALCFSPNRYWLCAA-TG----PSIKIWDLEGKIIVDEL 293 (340)
T ss_dssp EETT-TTE----EEEEEECSSCEEEEEECSSSSEEEEE-ET----TEEEEEETTTTEEEEEE
T ss_pred EEec-cCc----eeeeecCCceEEeeecCCCCceeecc-CC----CEEEEEECCCCeEEEec
Confidence 4552 111 23334333445566889988655433 22 37888888666544443
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.049 Score=50.26 Aligned_cols=171 Identities=13% Similarity=0.051 Sum_probs=92.0
Q ss_pred EEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCee
Q 008274 81 RLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~ 158 (571)
.|.++|+++++...- .+. ....-..+++ +|+.++...... ..++++|.++++...-..-. ..+|
T Consensus 45 ~v~~iD~~tg~v~~~i~l~--------~~~fgeGi~~--~g~~lyv~t~~~---~~v~viD~~t~~v~~~i~~g~~~g~- 110 (266)
T 2iwa_A 45 SVRQVALQTGKVENIHKMD--------DSYFGEGLTL--LNEKLYQVVWLK---NIGFIYDRRTLSNIKNFTHQMKDGW- 110 (266)
T ss_dssp EEEEEETTTCCEEEEEECC--------TTCCEEEEEE--ETTEEEEEETTC---SEEEEEETTTTEEEEEEECCSSSCC-
T ss_pred EEEEEECCCCCEEEEEecC--------CCcceEEEEE--eCCEEEEEEecC---CEEEEEECCCCcEEEEEECCCCCeE-
Confidence 689999999987543 221 2222223444 455555554333 25999999998753321111 1122
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCce-eeceeec--CeE---EEEEEEEeecCcEEEEEEcCCCC
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITEG--DWM---VEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~-~~~lT~~--~~~---~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
+.+.++ +.+|+|+ |-..|+.+|+.+.+ ...+.-+ ... ..... +. +| .||......
T Consensus 111 -----------glt~Dg-~~l~vs~--gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele-~~-dg-~lyvn~~~~-- 171 (266)
T 2iwa_A 111 -----------GLATDG-KILYGSD--GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE-YI-NG-EVWANIWQT-- 171 (266)
T ss_dssp -----------EEEECS-SSEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE-EE-TT-EEEEEETTS--
T ss_pred -----------EEEECC-CEEEEEC--CCCeEEEEECCCCcEEEEEEECCCCcccccceeEE-EE-CC-EEEEecCCC--
Confidence 112222 3455665 45689999987754 3444322 111 22332 44 55 677554332
Q ss_pred ceeEEEEEEeCCCCCCCCCCCeEecCC--------------CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCC
Q 008274 233 LESHLYCAKLYPDWNHTLEAPVKLTNG--------------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQD 294 (571)
Q Consensus 233 ~~~~l~~~~l~~~g~~~~~~~~~lt~~--------------~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~ 294 (571)
..|.++|.. .+. ....+.-. ..-+...++++++.+...... -+.++.+++..
T Consensus 172 --~~V~vID~~-tg~----V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~---~~~v~~i~l~~ 237 (266)
T 2iwa_A 172 --DCIARISAK-DGT----LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL---WPKLFEIKLHL 237 (266)
T ss_dssp --SEEEEEETT-TCC----EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT---CSEEEEEEEEE
T ss_pred --CeEEEEECC-CCc----EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC---CCeEEEEEEec
Confidence 478889983 232 22233211 123566899999876554433 25888888743
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.30 E-value=0.038 Score=54.83 Aligned_cols=184 Identities=10% Similarity=0.053 Sum_probs=101.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCC----ceEEEEEeecCC
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTG----QRKVILVEELDS 156 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g----~~~~l~~~~~~~ 156 (571)
.|..+|+++.+...+. ........+.|.+++..|+++ +..++ .|++++++++ ....+......
T Consensus 93 ~I~~i~l~~~~~~~~~---------~~~~~~~~l~~d~~~~~lyws-D~~~~--~I~~~~~~g~~~~~~~~~~~~~~~~- 159 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLI---------PNLRNVVALDTEVASNRIYWS-DLSQR--MICSTQLDRAHGVSSYDTVISRDIQ- 159 (400)
T ss_dssp EEEEECTTSCSCEEEE---------CSCSCEEEEEEETTTTEEEEE-ETTTT--EEEEEEC------CCCEEEECSSCS-
T ss_pred eeEEEccCCcceeEec---------cccCcceEEeeeeccCceEEE-ecCCC--eEEEEEcccCCCCCcceEEEeCCCC-
Confidence 4666777766554442 234456678999866554443 33322 4899998863 23333221100
Q ss_pred eeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeE-EEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 157 WVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
.|......|..+.+++. +. +...|.++++++...+.+...... ...+ .++|.++.||++-.... .
T Consensus 160 --------~p~glavD~~~~~lY~~-d~-~~~~I~~~~~~g~~~~~l~~~~~~~P~~i-avdp~~g~ly~td~~~~---~ 225 (400)
T 3p5b_L 160 --------APDGLAVDWIHSNIYWT-DS-VLGTVSVADTKGVKRKTLFRENGSKPRAI-VVDPVHGFMYWTDWGTP---A 225 (400)
T ss_dssp --------CEEEEEEETTTTEEEEE-ET-TTTEEEEECTTTCSEEEEEECSSCCEEEE-EEETTTTEEEEEECSSS---C
T ss_pred --------CcccEEEEecCCceEEE-EC-CCCeEEEEeCCCCceEEEEeCCCCCcceE-EEecccCeEEEEeCCCC---C
Confidence 00000001223335554 43 234789999988776655543322 3444 48998899999865332 4
Q ss_pred EEEEEEeCCCCCCCCCCCeEecCC--CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTNG--KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~~--~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.|+++++ +|. ..+.+... ..-...+++++++.+.+.= . ....|+++++ +|...+.+
T Consensus 226 ~I~~~~~--dG~----~~~~~~~~~l~~P~glavd~~~~~lY~aD-~--~~~~I~~~d~-dG~~~~~~ 283 (400)
T 3p5b_L 226 KIKKGGL--NGV----DIYSLVTENIQWPNGITLDLLSGRLYWVD-S--KLHSISSIDV-NGGNRKTI 283 (400)
T ss_dssp CEEEEET--TSC----SCEEEECSSCSCEEEEEEETTTTEEEEEE-T--TTTEEEEEET-TSCCCEEE
T ss_pred EEEEEeC--CCC----ccEEEEECCCCceEEEEEEeCCCEEEEEE-C--CCCEEEEEeC-CCCccEEE
Confidence 7999998 665 33344222 2334568888877776653 2 2358999998 45444444
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.29 E-value=0.028 Score=55.03 Aligned_cols=63 Identities=11% Similarity=-0.113 Sum_probs=37.4
Q ss_pred EEEEEECCCCceE-EEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 81 RLGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 81 ~l~~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
.+.++|.++.+.. .+.+..+. +. .....-..+.+||||++++.. ++.. ...|..+|+++++..
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~-r~-~~g~~P~~~a~spDGk~lyVa-n~~~-~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAP-RF-LVGTYPWMTSLTPDGKTLLFY-QFSP-APAVGVVDLEGKAFK 173 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCC-CC-CBSCCGGGEEECTTSSEEEEE-ECSS-SCEEEEEETTTTEEE
T ss_pred EEEEEECCCCeEEEEEECCCcc-cc-ccCCCCceEEEcCCCCEEEEE-EcCC-CCeEEEEECCCCcEE
Confidence 5788999998764 34332000 00 001123347899999976655 4321 235999999999754
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0094 Score=60.02 Aligned_cols=122 Identities=7% Similarity=-0.003 Sum_probs=65.1
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
|.+||++++....+... ......+..+.|+|||+.++...... .|.+.|+.+.+...+..+.. .+..
T Consensus 189 v~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~g~~dg----~i~~wd~~~~~~~~~~~h~~--~v~~- 255 (435)
T 4e54_B 189 TRLQDFKGNILRVFASS------DTINIWFCSLDVSASSRMVVTGDNVG----NVILLNMDGKELWNLRMHKK--KVTH- 255 (435)
T ss_dssp EEEEETTSCEEEEEECC------SSCSCCCCCEEEETTTTEEEEECSSS----BEEEEESSSCBCCCSBCCSS--CEEE-
T ss_pred EEEeeccCCceeEEecc------CCCCccEEEEEECCCCCEEEEEeCCC----cEeeeccCcceeEEEecccc--eEEe-
Confidence 67889988766554332 12233456689999999877654333 37888887655433321111 1110
Q ss_pred CCcccCCCCCccCCC--eEEEEEecCCccEEEEEeCCCcee-ece---eecCeEEEEEEEEeecCcEEEEEEc
Q 008274 162 DCFTPLDKGVTKYSG--GFIWASEKTGFRHLYLHDINGTCL-GPI---TEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 162 ~~~~~~~~~~~~~~d--~~~~~s~~~g~~~l~~~~~~~~~~-~~l---T~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
+ .++++ .+++....+|.-.| +|+...+. ..+ ......+..+ .|+|+|++|+..+.
T Consensus 256 -----v----~~~p~~~~~~~s~s~d~~v~i--wd~~~~~~~~~~~~~~~h~~~v~~~-~~spdg~~l~s~~~ 316 (435)
T 4e54_B 256 -----V----ALNPCCDWFLATASVDQTVKI--WDLRQVRGKASFLYSLPHRHPVNAA-CFSPDGARLLTTDQ 316 (435)
T ss_dssp -----E----EECTTCSSEEEEEETTSBCCE--EETTTCCSSSCCSBCCBCSSCEEEC-CBCTTSSEEEEEES
T ss_pred -----e----eecCCCceEEEEecCcceeeE--EecccccccceEEEeeeccccccce-eECCCCCeeEEEcC
Confidence 0 12333 35555555665444 45433221 111 1123345555 49999998766554
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.021 Score=61.99 Aligned_cols=188 Identities=9% Similarity=0.032 Sum_probs=90.0
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccC--CeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecCCee
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHG--NILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELDSWV 158 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD--g~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~~w~ 158 (571)
|.+||+.+++...+... ......+..+.|+|+ |+.++...... .|.+.|+.++.... +........+
T Consensus 79 I~vwd~~~~~~~~~~~~------~~h~~~V~~v~~sp~~~~~~l~sgs~dg----~I~vwdl~~~~~~~~~~~~~~~~~v 148 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVH------AVHSASVNSVQWAPHEYGPLLLVASSDG----KVSVVEFKENGTTSPIIIDAHAIGV 148 (753)
T ss_dssp EEEEEEETTEEEEEEEE------CCCSSCEEEEEECCGGGCSEEEEEETTS----EEEEEECCSSSCCCCEEEECCSSCE
T ss_pred EEEEECCCCcccccccc------cCCCCCeEEEEECCCCCCCEEEEEeCCC----cEEEEEeecCCCcceeEeecCCCce
Confidence 68889988863333221 234567889999999 88777665433 48888888773221 1111111111
Q ss_pred eccCCcccCCC----CCccCCC-eEEEEEecCCccEEEEEeCCCce---eeceeecCeEEEEEEEEeec---CcEEEEEE
Q 008274 159 NLHDCFTPLDK----GVTKYSG-GFIWASEKTGFRHLYLHDINGTC---LGPITEGDWMVEQIVGVNEA---SGQVYFTG 227 (571)
Q Consensus 159 ~~~~~~~~~~~----~~~~~~d-~~~~~s~~~g~~~l~~~~~~~~~---~~~lT~~~~~~~~~~~~s~d---g~~l~~~~ 227 (571)
.. -.|.|... .....++ .+++....+|.-.+|-+...... ...+......+..+ .|+|+ ++.| +++
T Consensus 149 ~~-l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l-~~sp~~~~~~~l-~s~ 225 (753)
T 3jro_A 149 NS-ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV-AWSPTVLLRSYL-ASV 225 (753)
T ss_dssp EE-EEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE-EECCCCSSSEEE-EEE
T ss_pred EE-EEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEE-EeccCCCCCCEE-EEE
Confidence 00 01111100 0000112 35555666676555555433222 12233333345555 49999 5554 444
Q ss_pred cCCCCceeEEEEEEeCCCCCCCCCCCeEec----CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 228 TLDGPLESHLYCAKLYPDWNHTLEAPVKLT----NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 228 ~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt----~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
..++. ..+|.+.- ... . ....+. .......+.++|+|++++..... ..+++.++.
T Consensus 226 s~Dg~--I~iwd~~~--~~~-~--~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D----g~I~vwd~~ 284 (753)
T 3jro_A 226 SQDRT--CIIWTQDN--EQG-P--WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD----NKVTLWKEN 284 (753)
T ss_dssp ESSSC--EEEEEESS--SSS-C--CBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS----SCEECCBCC
T ss_pred ecCCE--EEEecCCC--CCC-c--ceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC----CEEEEEecC
Confidence 44442 55554432 111 0 011111 11223456889999876554322 245555554
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.05 Score=52.48 Aligned_cols=158 Identities=6% Similarity=0.031 Sum_probs=86.8
Q ss_pred CceeEEEEEcc--CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 108 EEYLARVNWMH--GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 108 ~~~~~~~~wsp--Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
...+..+.|+| +|++++...... .|.+.|+++++...+........ ..- ..+++++ ++.....
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg----~i~~wd~~~~~~~~~~~~~~~~~------i~~----~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRG----TIGFQSYEDDSQYIVHSAKSDVE------YSS----GVLHKDSLLLALYSP 190 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTC----CEEEEESSSSCEEEEECCCSSCC------CCE----EEECTTSCEEEEECT
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCC----cEEEEECCCCcEEEEEecCCCCc------eEE----EEECCCCCEEEEEcC
Confidence 45688899999 998877665433 38889999998754432211100 001 1345565 5555455
Q ss_pred CCccEEEEEeCCCcee--eceee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC---
Q 008274 185 TGFRHLYLHDINGTCL--GPITE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN--- 258 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~--~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~--- 258 (571)
+| .|.++|+.+++. ..+.. ....+..+. |+|+|++|+..++ + .+...++.. +. ....+..
T Consensus 191 dg--~i~iwd~~~~~~~~~~~~~~h~~~v~~l~-fs~~g~~l~s~~~--~----~v~iwd~~~-~~----~~~~~~~~~~ 256 (343)
T 3lrv_A 191 DG--ILDVYNLSSPDQASSRFPVDEEAKIKEVK-FADNGYWMVVECD--Q----TVVCFDLRK-DV----GTLAYPTYTI 256 (343)
T ss_dssp TS--CEEEEESSCTTSCCEECCCCTTSCEEEEE-ECTTSSEEEEEES--S----BEEEEETTS-ST----TCBSSCCCBC
T ss_pred CC--EEEEEECCCCCCCccEEeccCCCCEEEEE-EeCCCCEEEEEeC--C----eEEEEEcCC-CC----cceeeccccc
Confidence 55 456667665543 34444 344566664 9999998877772 2 344556621 11 1111111
Q ss_pred CCc---eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 259 GKG---KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 259 ~~g---~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
... ...+.++|+|++++....... .+.+++...+.
T Consensus 257 ~~~~~~~~~~~~~~~g~~l~~~s~~d~---~i~v~~~~~~~ 294 (343)
T 3lrv_A 257 PEFKTGTVTYDIDDSGKNMIAYSNESN---SLTIYKFDKKT 294 (343)
T ss_dssp -----CCEEEEECTTSSEEEEEETTTT---EEEEEEECTTT
T ss_pred ccccccceEEEECCCCCEEEEecCCCC---cEEEEEEcccc
Confidence 111 124789999998776433122 56666664433
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.041 Score=50.79 Aligned_cols=152 Identities=14% Similarity=0.111 Sum_probs=75.2
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCcc
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~ 188 (571)
.....+.++|||++++ . +... ..|+++|..+........ ... -.+ .....++++-+|+++. +..
T Consensus 108 ~~p~~i~~~~~g~l~v-~-~~~~--~~i~~~~~~~~~~~~~~~---~~~------~~p--~~i~~~~~g~l~v~~~-~~~ 171 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYV-A-DRGN--NRVVKLAAGSKTQTVLPF---TGL------NDP--DGVAVDNSGNVYVTDT-DNN 171 (270)
T ss_dssp SSEEEEEECTTCCEEE-E-EGGG--TEEEEECTTCCSCEECCC---CSC------CSC--CCEEECTTCCEEEEEG-GGT
T ss_pred CCCcceEECCCCCEEE-E-ECCC--CEEEEEECCCceeEeecc---ccC------CCc--eeEEEeCCCCEEEEEC-CCC
Confidence 3556788999998333 2 2221 247888766554332110 000 001 1112344443444443 234
Q ss_pred EEEEEeCCCceeeceeecC-eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC--CceEEE
Q 008274 189 HLYLHDINGTCLGPITEGD-WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG--KGKHVA 265 (571)
Q Consensus 189 ~l~~~~~~~~~~~~lT~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~--~g~~~~ 265 (571)
.|++++.++.......... .....+ .++++| .||+.....+ .|++++. ++. ....+... .....+
T Consensus 172 ~i~~~~~~~~~~~~~~~~~~~~p~~i-~~d~~g-~l~v~~~~~~----~v~~~~~--~~~----~~~~~~~~~~~~p~~i 239 (270)
T 1rwi_B 172 RVVKLEAESNNQVVLPFTDITAPWGI-AVDEAG-TVYVTEHNTN----QVVKLLA--GST----TSTVLPFTGLNTPLAV 239 (270)
T ss_dssp EEEEECTTTCCEEECCCSSCCSEEEE-EECTTC-CEEEEETTTS----CEEEECT--TCS----CCEECCCCSCSCEEEE
T ss_pred EEEEEecCCCceEeecccCCCCceEE-EECCCC-CEEEEECCCC----cEEEEcC--CCC----cceeeccCCCCCceeE
Confidence 6889998776544433222 123344 478887 6777765443 4677776 443 22222221 234556
Q ss_pred EECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 266 VLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 266 ~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.++++|+ +.+. ... -..+.++++
T Consensus 240 ~~~~~g~-l~v~-~~~--~~~v~~~~~ 262 (270)
T 1rwi_B 240 AVDSDRT-VYVA-DRG--NDRVVKLTS 262 (270)
T ss_dssp EECTTCC-EEEE-EGG--GTEEEEECC
T ss_pred EECCCCC-EEEE-ECC--CCEEEEEcC
Confidence 7888886 3222 221 125666654
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.035 Score=53.21 Aligned_cols=147 Identities=11% Similarity=-0.045 Sum_probs=76.7
Q ss_pred eEEEEEcc-CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCC-CeEEEEEecC---
Q 008274 111 LARVNWMH-GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKT--- 185 (571)
Q Consensus 111 ~~~~~wsp-Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~~~~~s~~~--- 185 (571)
...+.+.+ +|++++ ... .. .|+++|.++|+.+.+....... +.-.+.. ...++ ++-+|+++..
T Consensus 82 p~gi~~~~~~g~l~v-~d~-~~---~i~~~d~~~g~~~~~~~~~~~~-----~~~~p~~--i~~d~~~G~l~v~d~~~~~ 149 (322)
T 2fp8_A 82 TYDISYNLQNNQLYI-VDC-YY---HLSVVGSEGGHATQLATSVDGV-----PFKWLYA--VTVDQRTGIVYFTDVSTLY 149 (322)
T ss_dssp EEEEEEETTTTEEEE-EET-TT---EEEEECTTCEECEEEESEETTE-----ECSCEEE--EEECTTTCCEEEEESCSSC
T ss_pred CceEEEcCCCCcEEE-EEC-CC---CEEEEeCCCCEEEEecccCCCC-----cccccce--EEEecCCCEEEEECCcccc
Confidence 45678887 676433 322 21 2899999988766654322110 0000110 12345 5534444322
Q ss_pred -------------CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCC
Q 008274 186 -------------GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEA 252 (571)
Q Consensus 186 -------------g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~ 252 (571)
....|++++.++++.+.+..+......+ .+++||+.||++-... ..|+++++ ++.. ...
T Consensus 150 ~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gi-a~~~dg~~lyv~d~~~----~~I~~~~~--~~~~-~~~ 221 (322)
T 2fp8_A 150 DDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGA-EVSADSSFVLVAEFLS----HQIVKYWL--EGPK-KGT 221 (322)
T ss_dssp CTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEE-EECTTSSEEEEEEGGG----TEEEEEES--SSTT-TTC
T ss_pred cccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcce-EECCCCCEEEEEeCCC----CeEEEEEC--CCCc-CCc
Confidence 1257999998877655443321111233 4899999999886533 46888887 3320 011
Q ss_pred CeEecCCCceEEEEECCCCCEEEEE
Q 008274 253 PVKLTNGKGKHVAVLDHNMRNFVDF 277 (571)
Q Consensus 253 ~~~lt~~~g~~~~~~s~~g~~~v~~ 277 (571)
.+.+....+-....++++|+.++..
T Consensus 222 ~~~~~~~~gP~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 222 AEVLVKIPNPGNIKRNADGHFWVSS 246 (322)
T ss_dssp EEEEEECSSEEEEEECTTSCEEEEE
T ss_pred cceEEeCCCCCCeEECCCCCEEEEe
Confidence 2222212234455788888754443
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0056 Score=61.57 Aligned_cols=170 Identities=9% Similarity=0.007 Sum_probs=82.8
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECC---CCceEEEEEeecCCeeeccCCcccC--CCCC-----ccCCCe
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK---TGQRKVILVEELDSWVNLHDCFTPL--DKGV-----TKYSGG 177 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~---~g~~~~l~~~~~~~w~~~~~~~~~~--~~~~-----~~~~d~ 177 (571)
...+..+.|+||++.++...... . |.+.|++ +|+.........-.-. .|.+. .... .+++++
T Consensus 111 ~~~v~~~~~~~~~~~l~s~s~dg--~--i~vwd~~~~~~~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~ 182 (437)
T 3gre_A 111 SSTVTQITMIPNFDAFAVSSKDG--Q--IIVLKVNHYQQESEVKFLNCECIRKI----NLKNFGKNEYAVRMRAFVNEEK 182 (437)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS--E--EEEEEEEEEEETTEEEEEEEEEEEEE----EGGGGSSCCCEEEEEEEECSSC
T ss_pred CCCEEEEEEeCCCCEEEEEeCCC--E--EEEEEeccccCCceeeccccceeEEE----EccCcccccCceEEEEEEcCCC
Confidence 45678899999999777665433 2 5555553 5554333221100000 01110 0000 012333
Q ss_pred -EEEEEecCCccEEEEEeCCCcee-eceee--cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCC
Q 008274 178 -FIWASEKTGFRHLYLHDINGTCL-GPITE--GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAP 253 (571)
Q Consensus 178 -~~~~s~~~g~~~l~~~~~~~~~~-~~lT~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~ 253 (571)
+++....+| .|.++++.+++. ..+.. ....+..+. |+|+++.|+..+.. +. ..+ .++. .+. ..
T Consensus 183 ~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~h~~~v~~~~-~s~~~~~l~s~~~d-g~--i~i--wd~~-~~~----~~ 249 (437)
T 3gre_A 183 SLLVALTNLS--RVIIFDIRTLERLQIIENSPRHGAVSSIC-IDEECCVLILGTTR-GI--IDI--WDIR-FNV----LI 249 (437)
T ss_dssp EEEEEEETTS--EEEEEETTTCCEEEEEECCGGGCCEEEEE-ECTTSCEEEEEETT-SC--EEE--EETT-TTE----EE
T ss_pred CEEEEEeCCC--eEEEEeCCCCeeeEEEccCCCCCceEEEE-ECCCCCEEEEEcCC-Ce--EEE--EEcC-Ccc----EE
Confidence 454444444 577778766543 34443 223455554 99998877665543 32 344 4552 121 22
Q ss_pred eEec-C-CCceEEEE----ECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 254 VKLT-N-GKGKHVAV----LDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 254 ~~lt-~-~~g~~~~~----~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
..+. . ........ +++++++++. .+. -..+.+.++.+++.++.+.
T Consensus 250 ~~~~~~~~~~v~~~~~~~~~s~~~~~l~s-~~~---dg~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 250 RSWSFGDHAPITHVEVCQFYGKNSVIVVG-GSS---KTFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp EEEBCTTCEEEEEEEECTTTCTTEEEEEE-EST---TEEEEEEETTTTEEEEEEE
T ss_pred EEEecCCCCceEEEEeccccCCCccEEEE-EcC---CCcEEEEEcCCCcEEEEEE
Confidence 2222 1 11223343 3456655543 322 2378888987777665554
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.082 Score=49.89 Aligned_cols=149 Identities=10% Similarity=0.035 Sum_probs=77.0
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE--EEEee-cCCeeeccCCcccCCCCCccCCCeEEEEEe
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV--ILVEE-LDSWVNLHDCFTPLDKGVTKYSGGFIWASE 183 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~--l~~~~-~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~ 183 (571)
.........|+++|+.++...... .|.+.|+.+++... +.... ....+.. ..+.+ ....++....
T Consensus 149 ~~~~~~~~~~~~~~~~l~s~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~~~~-------~~~~~~~~~~ 216 (318)
T 4ggc_A 149 HSQEVCGLRWAPDGRHLASGGNDN----LVNVWPSAPGEGGWVPLQTFTQHQGAVKA-VAWCP-------WQSNVLATGG 216 (318)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTS----CEEEEESSCBTTBSCCSEEECCCCSCEEE-EEECT-------TSTTEEEEEE
T ss_pred ccCceEEEEEcCCCCEEEEEecCc----ceeEEECCCCcccccceeeecccCCceEE-EEecC-------CCCcEEEEEe
Confidence 455677789999999777654433 27778888775321 11111 1111100 00111 1122443333
Q ss_pred cCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC-CCce
Q 008274 184 KTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-GKGK 262 (571)
Q Consensus 184 ~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-~~g~ 262 (571)
......|.+.+...............+... .++++++.++..+...+ ..|+..++. .+. ....+.. ....
T Consensus 217 ~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~sg~~d---~~i~iwd~~-~~~----~~~~l~gH~~~V 287 (318)
T 4ggc_A 217 GTSDRHIRIWNVCSGACLSAVDAHSQVCSI-LWSPHYKELISGHGFAQ---NQLVIWKYP-TMA----KVAELKGHTSRV 287 (318)
T ss_dssp CTTTCEEEEEETTTCCEEEEEECSSCEEEE-EEETTTTEEEEEECTTT---CCEEEEETT-TCC----EEEEECCCSSCE
T ss_pred cCCCCEEEEEecccccccccccceeeeeee-eecccccceEEEEEcCC---CEEEEEECC-CCc----EEEEEcCCCCCE
Confidence 333345666676655444333333344444 48899998888764322 234455662 222 3344443 2334
Q ss_pred EEEEECCCCCEEEE
Q 008274 263 HVAVLDHNMRNFVD 276 (571)
Q Consensus 263 ~~~~~s~~g~~~v~ 276 (571)
..+.|+|||++++-
T Consensus 288 ~~l~~spdg~~l~S 301 (318)
T 4ggc_A 288 LSLTMSPDGATVAS 301 (318)
T ss_dssp EEEEECTTSSCEEE
T ss_pred EEEEEcCCCCEEEE
Confidence 56689999987653
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.08 E-value=0.097 Score=50.01 Aligned_cols=186 Identities=15% Similarity=0.143 Sum_probs=101.9
Q ss_pred EEEEEEECCCCc-eEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-EEEEEeecCCe
Q 008274 80 VRLGVVSAAGGP-VSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-KVILVEELDSW 157 (571)
Q Consensus 80 ~~l~~~dl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~~l~~~~~~~w 157 (571)
..|..+|++++. ...+.+. .......+.|.+.+..|++ ++-.. ..|++++++++.. +.+....-.
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~--------~~~~~~~ld~d~~~~~lyw-~D~~~--~~I~r~~~~g~~~~~~~~~~~l~-- 79 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVG--------GLEDAAAVDFVFSHGLIYW-SDVSE--EAIKRTEFNKTESVQNVVVSGLL-- 79 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEE--------EEEEEEEEEEEGGGTEEEE-EETTT--TEEEEEETTSSSCCCEEEEECCS--
T ss_pred CeEEEEECCCCceEEEEEec--------CCCccEEEEEEeCCCEEEE-EECCC--CcEEEEEccCCCceEEEEcCCCC--
Confidence 367888998763 1222111 2234557889986554433 33332 2599999998742 222221100
Q ss_pred eeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 158 VNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
.|......|..+.+++ ++. +...|.++++++...+.+..... ....+ .++|.++.||++-... ...
T Consensus 80 -------~p~glavd~~~g~ly~-~d~-~~~~I~~~~~dG~~~~~l~~~~~~~P~gi-avdp~~g~ly~td~~~---~~~ 146 (318)
T 3sov_A 80 -------SPDGLACDWLGEKLYW-TDS-ETNRIEVSNLDGSLRKVLFWQELDQPRAI-ALDPSSGFMYWTDWGE---VPK 146 (318)
T ss_dssp -------CCCEEEEETTTTEEEE-EET-TTTEEEEEETTSCSCEEEECSSCSSEEEE-EEEGGGTEEEEEECSS---SCE
T ss_pred -------CccEEEEEcCCCeEEE-EEC-CCCEEEEEECCCCcEEEEEeCCCCCccEE-EEeCCCCEEEEEecCC---CCE
Confidence 0000000122233444 444 34578899988876555543322 23344 3888888999986432 267
Q ss_pred EEEEEeCCCCCCCCCCCeEec-CC-CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 237 LYCAKLYPDWNHTLEAPVKLT-NG-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt-~~-~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
|+++++ +|. ..+.+. .+ ..-...+++++++.+.+.= . ....|+++++ +|...+.+
T Consensus 147 I~r~~~--dG~----~~~~~~~~~l~~Pnglavd~~~~~lY~aD-~--~~~~I~~~d~-dG~~~~~~ 203 (318)
T 3sov_A 147 IERAGM--DGS----SRFIIINSEIYWPNGLTLDYEEQKLYWAD-A--KLNFIHKSNL-DGTNRQAV 203 (318)
T ss_dssp EEEEET--TSC----SCEEEECSSCSCEEEEEEETTTTEEEEEE-T--TTTEEEEEET-TSCSCEEE
T ss_pred EEEEEc--CCC----CeEEEEECCCCCccEEEEeccCCEEEEEE-C--CCCEEEEEcC-CCCceEEE
Confidence 999998 664 333332 21 2234568998877776653 2 2358999998 44443444
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.13 Score=46.95 Aligned_cols=170 Identities=9% Similarity=0.014 Sum_probs=91.2
Q ss_pred EEEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 80 VRLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
+.|.++|+++|+...- .+ +.... ...-.++|+.++++.-+. ..++++|.++++...=..-...+|.
T Consensus 65 S~v~~vD~~Tgkv~~~~~l--------~~~~F--geGit~~g~~ly~ltw~~---~~v~v~D~~t~~~~~ti~~~~eG~g 131 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIEL--------GKRYF--GEGISDWKDKIVGLTWKN---GLGFVWNIRNLRQVRSFNYDGEGWG 131 (262)
T ss_dssp EEEEEECTTTCCEEEEEEC--------CTTCC--EEEEEEETTEEEEEESSS---SEEEEEETTTCCEEEEEECSSCCCC
T ss_pred ceEEEEECCCCcEEEEEec--------CCccc--eeEEEEeCCEEEEEEeeC---CEEEEEECccCcEEEEEECCCCceE
Confidence 5789999999987543 22 11112 122344566666664433 2599999999886432221222231
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCce-eeceee--cCeEE---EEEEEEeecCcEEEEEEcCCCC
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITE--GDWMV---EQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~-~~~lT~--~~~~~---~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
..++ ++.+++|+ |-..|+.+|+.+.+ ...++- +...+ .+.. |. +| .||......
T Consensus 132 ------------lt~d-g~~L~~Sd--Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe-~~-~G-~lyan~w~~-- 191 (262)
T 3nol_A 132 ------------LTHN-DQYLIMSD--GTPVLRFLDPESLTPVRTITVTAHGEELPELNELE-WV-DG-EIFANVWQT-- 191 (262)
T ss_dssp ------------EEEC-SSCEEECC--SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEE-EE-TT-EEEEEETTS--
T ss_pred ------------EecC-CCEEEEEC--CCCeEEEEcCCCCeEEEEEEeccCCccccccceeE-EE-CC-EEEEEEccC--
Confidence 1222 23566665 45789999987654 333332 22222 2232 44 55 677554332
Q ss_pred ceeEEEEEEeCCCCCCCCCCCeEecC-------------CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 233 LESHLYCAKLYPDWNHTLEAPVKLTN-------------GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 233 ~~~~l~~~~l~~~g~~~~~~~~~lt~-------------~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
..|+++|.. +|. ....+.. ...-+..+++|+++.+..+.... |.+|.+.+
T Consensus 192 --~~I~vIDp~-tG~----V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W---p~~~ev~~ 254 (262)
T 3nol_A 192 --NKIVRIDPE-TGK----VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW---PKVFEITL 254 (262)
T ss_dssp --SEEEEECTT-TCB----EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC---SEEEEEEE
T ss_pred --CeEEEEECC-CCc----EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC---CceEEEEE
Confidence 468888763 221 1111211 12235568999988776655444 47776654
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.036 Score=53.64 Aligned_cols=125 Identities=14% Similarity=0.025 Sum_probs=69.9
Q ss_pred EEEEECCCCceE-EEeccCCCCCCCCCCceeEEEEEccC----CeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCC
Q 008274 82 LGVVSAAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHG----NILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDS 156 (571)
Q Consensus 82 l~~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspD----g~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~ 156 (571)
+.+||+.+++.. .+..... ......+..+.|+|| |++++...... .|.+.|+.+++..........
T Consensus 46 v~vw~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg----~i~v~d~~~~~~~~~~~~~~~- 116 (366)
T 3k26_A 46 VTLYECHSQGEIRLLQSYVD----ADADENFYTCAWTYDSNTSHPLLAVAGSRG----IIRIINPITMQCIKHYVGHGN- 116 (366)
T ss_dssp EEEEEECGGGCEEEEEEEEC----SCTTCCEEEEEEEECTTTCCEEEEEEETTC----EEEEECTTTCCEEEEEESCCS-
T ss_pred EEEEEcCCCcEEEeeeeccc----cCCCCcEEEEEeccCCCCCCCEEEEecCCC----EEEEEEchhceEeeeecCCCC-
Confidence 577888865442 3321100 113456888999999 56666654433 488999999886544332111
Q ss_pred eeeccCCcccCCCCCccCC-Ce-EEEEEecCCccEEEEEeCCCceeec-e---eecCeEEEEEEEEeecCcEEEEEEc
Q 008274 157 WVNLHDCFTPLDKGVTKYS-GG-FIWASEKTGFRHLYLHDINGTCLGP-I---TEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~-d~-~~~~s~~~g~~~l~~~~~~~~~~~~-l---T~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
.+. .+ .+++ ++ +++....+|. |+++++..++... + ......+..+. |+|+++.|+..+.
T Consensus 117 ~i~------~~----~~~~~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~ 181 (366)
T 3k26_A 117 AIN------EL----KFHPRDPNLLLSVSKDHA--LRLWNIQTDTLVAIFGGVEGHRDEVLSAD-YDLLGEKIMSCGM 181 (366)
T ss_dssp CEE------EE----EECSSCTTEEEEEETTSC--EEEEETTTTEEEEEECSTTSCSSCEEEEE-ECTTSSEEEEEET
T ss_pred cEE------EE----EECCCCCCEEEEEeCCCe--EEEEEeecCeEEEEecccccccCceeEEE-ECCCCCEEEEecC
Confidence 111 00 2333 33 5555555553 6666766655433 3 23333455554 9999988776654
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.038 Score=55.51 Aligned_cols=117 Identities=12% Similarity=0.016 Sum_probs=61.9
Q ss_pred CceeEEEEEccC-CeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecC
Q 008274 108 EEYLARVNWMHG-NILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKT 185 (571)
Q Consensus 108 ~~~~~~~~wspD-g~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~ 185 (571)
...+..+.|+|+ ++.++...... .|.+.|+.++........... .+ ..+ .|++++ +++....+
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~Dg----~v~iwD~~~~~~~~~~~~~~~-~v------~~v----~wspdg~~lasgs~d 213 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLADG----SIAVLQVTETVKVCATLPSTV-AV------TSV----CWSPKGKQLAVGKQN 213 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEETTS----CEEEEEESSSEEEEEEECGGG-CE------EEE----EECTTSSCEEEEETT
T ss_pred CCceEEEEECCCCCCEEEEEECCC----eEEEEEcCCCcceeeccCCCC-ce------eEE----EEcCCCCEEEEEcCC
Confidence 456888999998 56666665433 288888888743221111011 11 011 345555 55555555
Q ss_pred CccEEEEEeCCCceeeceeec-------CeEEEEEEEEeecCcEEEEEEcCCCCc--eeEEEEEEe
Q 008274 186 GFRHLYLHDINGTCLGPITEG-------DWMVEQIVGVNEASGQVYFTGTLDGPL--ESHLYCAKL 242 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~~-------~~~~~~~~~~s~dg~~l~~~~~~~~~~--~~~l~~~~l 242 (571)
| .|.+++..+.....+... ...+..+ .|++++..++..++.++.. ...++.+++
T Consensus 214 g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v-~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l 276 (434)
T 2oit_A 214 G--TVVQYLPTLQEKKVIPCPPFYESDHPVRVLDV-LWIGTYVFAIVYAAADGTLETSPDVVMALL 276 (434)
T ss_dssp S--CEEEECTTCCEEEEECCCTTCCTTSCEEEEEE-EEEETTEEEEEEEETTCCSSSCCEEEEEEC
T ss_pred C--cEEEEccCCcccccccCCcccCCCCceeEEEE-EEecCceEEEEEccCCCccCCCCceEEEEe
Confidence 5 466677664333333221 2245555 4888887665555443221 133555555
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.16 Score=54.84 Aligned_cols=115 Identities=13% Similarity=0.101 Sum_probs=69.1
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCC-CeEEEEEecCCccEE
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHL 190 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~~l 190 (571)
..++..+.++.|+++ +...+ .|.+++++++..+.|....... |.. +..++ .+.+|+++......|
T Consensus 474 ~GLAvD~~~~~LY~t-D~~~~--~I~v~~ldG~~~~~l~~~~l~~---------P~g--IaVDp~~g~LYwtD~g~~~~I 539 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWT-DSVLG--TVSVADTKGVKRKTLFRENGSK---------PRA--IVVDPVHGFMYWTDWGTPAKI 539 (791)
T ss_dssp CEEEEETTTTEEEEE-ETTTT--EEEEEETTSSSEEEEEECTTCC---------EEE--EEEETTTTEEEEEECSSSCEE
T ss_pred ceeeeeecCCcEEEE-ecCCC--eEEEEeCCCCeEEEEEeCCCCC---------cce--EEEecCCCCEEEecCCCCCeE
Confidence 346666666554443 43322 5999999988777665421110 100 11223 346666665434689
Q ss_pred EEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 191 YLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 191 ~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
++++++|...+.|..... ....+ .+++.++.||++-... ..|+++++ +|.
T Consensus 540 ~~~~~dG~~~~~lv~~~l~~P~GL-avD~~~~~LYwaD~~~----~~I~~~d~--dG~ 590 (791)
T 3m0c_C 540 KKGGLNGVDIYSLVTENIQWPNGI-TLDLLSGRLYWVDSKL----HSISSIDV--NGG 590 (791)
T ss_dssp EEEETTSCCEEEEECSSCSCEEEE-EEETTTTEEEEEETTT----TEEEEEET--TSC
T ss_pred EEEecCCCceEEEEeCCCCCceEE-EEecCCCeEEEEeCCC----CcEEEEec--CCC
Confidence 999999887766654432 23344 4888899999985332 57889998 664
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.072 Score=51.03 Aligned_cols=183 Identities=9% Similarity=-0.002 Sum_probs=86.5
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceE-EEeccCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVS-WMDLQCGGTDQ 104 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~-~~~~~~~~~~~ 104 (571)
+.+.+||||+.++=.......+....+..-.++. . +-..|... ..+.+||+++|+.. .+.-.
T Consensus 160 ~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~---~------~LaSgS~D--~TIkIWDl~TGk~l~tL~g~------ 222 (356)
T 2w18_A 160 EVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQ---E------ALLGTTIM--NNIVIWNLKTGQLLKKMHID------ 222 (356)
T ss_dssp EEEEECTTSCEEEEEEECCCSSCEEEEEEEETST---T------EEEEEETT--SEEEEEETTTCCEEEEEECC------
T ss_pred EEEEECCCCceeeeeccCCCceeeEEeeccCCCC---c------eEEEecCC--CcEEEEECCCCcEEEEEcCC------
Confidence 4566899998876444444444444443310100 0 00000111 25889999999853 33210
Q ss_pred CCCCceeEEEEEccCCeEEEEEEec--------cCccEEEEEEECCCCceEEEEEe--ecCCeeeccCCcccCCCCCccC
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNR--------SQTKLKVLKFDIKTGQRKVILVE--ELDSWVNLHDCFTPLDKGVTKY 174 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r--------~~~~~~i~~~d~~~g~~~~l~~~--~~~~w~~~~~~~~~~~~~~~~~ 174 (571)
......+...+|||||+.++...+. ......|-..|+++|+...+..- +++. ...+ ... ..+
T Consensus 223 ~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh----~~~~--lsg--~~s 294 (356)
T 2w18_A 223 DSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQ----AGRF--LEG--DVK 294 (356)
T ss_dssp C---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTC----CCCE--EEE--EEE
T ss_pred CcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCC----ccee--Ecc--ccC
Confidence 0011245566899999977654321 11234566678888875433211 0000 0000 000 000
Q ss_pred CCeEEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 175 SGGFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 175 ~d~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
+.++.....+| .|.+.|+.+++. ..|+.....+...+.|||||++|+-. ..++. ..||.
T Consensus 295 -g~~lASgS~Dg--TIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSG-S~D~T--IklWd 354 (356)
T 2w18_A 295 -DHCAAAILTSG--TIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAG-QKDGN--IFVYH 354 (356)
T ss_dssp -TTEEEEEETTS--CEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEE-CTTSC--EEEEE
T ss_pred -CCEEEEEcCCC--cEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEE-ECCCc--EEEec
Confidence 11233333344 467778777653 44553332233333599999877644 44442 55554
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.039 Score=54.68 Aligned_cols=66 Identities=17% Similarity=0.227 Sum_probs=38.3
Q ss_pred CCCe-EEEEEecCCccEEEEEeCC-Ccee---eceeec-Ce-------------EEEEEEEEeecCcEEEEEEc------
Q 008274 174 YSGG-FIWASEKTGFRHLYLHDIN-GTCL---GPITEG-DW-------------MVEQIVGVNEASGQVYFTGT------ 228 (571)
Q Consensus 174 ~~d~-~~~~s~~~g~~~l~~~~~~-~~~~---~~lT~~-~~-------------~~~~~~~~s~dg~~l~~~~~------ 228 (571)
++|+ ++++|++. ...|.+++.. .++. ..+..+ .+ .-..+ .+|+||++||++..
T Consensus 329 S~DGrfLYVSnrg-~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~-~lSpDGk~LyVaNsl~~~wd 406 (462)
T 2ece_A 329 SLDDKFLYLSLWG-IGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQML-EISRDGRRVYVTNSLYSTWD 406 (462)
T ss_dssp CTTSCEEEEEETT-TTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCE-EECTTSSEEEEECCCCHHHH
T ss_pred CCCCCEEEEEeCC-CCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEE-EEcCCCCEEEEEcCCccccc
Confidence 5554 88888884 3578888864 3222 222222 11 11233 48999999999873
Q ss_pred -C---CCCceeEEEEEEe
Q 008274 229 -L---DGPLESHLYCAKL 242 (571)
Q Consensus 229 -~---~~~~~~~l~~~~l 242 (571)
+ ++ ....+++++.
T Consensus 407 ~Qfyp~~-~~~~~~~~~v 423 (462)
T 2ece_A 407 NQFYPEG-LKGWMVKLNA 423 (462)
T ss_dssp HHHSTTC-CCCEEEEEEE
T ss_pred ccccCCC-CceEEEEEEe
Confidence 1 11 2367776666
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.26 Score=47.04 Aligned_cols=193 Identities=11% Similarity=0.069 Sum_probs=97.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeE--EEEEEecc--CccEEEEEEECCCCceEEEEEeecCC
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNIL--TAQVLNRS--QTKLKVLKFDIKTGQRKVILVEELDS 156 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~--i~~~~~r~--~~~~~i~~~d~~~g~~~~l~~~~~~~ 156 (571)
.|++||+++.....+... ....-...+.+.-.|+. ++++++|. .+...||.+|.++++.+.+....-+
T Consensus 51 gL~Vydl~G~~l~~~~~g-------~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~p- 122 (355)
T 3amr_A 51 GLVVYSLDGKMLHSYNTG-------KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHP- 122 (355)
T ss_dssp EEEEEETTSCEEEEECCS-------CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSC-
T ss_pred CEEEEcCCCcEEEEccCC-------CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccC-
Confidence 589999976666555221 01222333445445664 78899998 7777889889998875554210000
Q ss_pred eeeccCCcccCCCCCccCC--Ce-EEEEEecCCccEEEEEeC-CCc-----eeeceeecCeEEEEEEEEeecCcEEEEEE
Q 008274 157 WVNLHDCFTPLDKGVTKYS--GG-FIWASEKTGFRHLYLHDI-NGT-----CLGPITEGDWMVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~--d~-~~~~s~~~g~~~l~~~~~-~~~-----~~~~lT~~~~~~~~~~~~s~dg~~l~~~~ 227 (571)
... ....+...-...++ .. ++|+++++|.-..|.+.. .++ ..+.+.-+. .++.+. .++...+||+.-
T Consensus 123 v~t--~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs-q~Egcv-vDd~~g~Lyv~e 198 (355)
T 3amr_A 123 IAT--AINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS-QTEGMA-ADDEYGRLYIAE 198 (355)
T ss_dssp EEC--CCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS-CEEEEE-EETTTTEEEEEE
T ss_pred cCC--CCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC-CcceEE-EcCCCCeEEEec
Confidence 000 00111110000122 22 677788888655555532 222 134444443 455565 787788888874
Q ss_pred cCCCCceeEEEEEEeCCCCCCCCCCCeEecCC---CceEEEEE--CCCCC-EEEEEeeCCCCCCEEEEEEcC
Q 008274 228 TLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG---KGKHVAVL--DHNMR-NFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 228 ~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~---~g~~~~~~--s~~g~-~~v~~~s~~~~p~~l~~~~~~ 293 (571)
.. ..||+++....+..+.....++..+ ......++ .++++ +++.++... ..+.+++..
T Consensus 199 Ed-----~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~---~s~~Vydr~ 262 (355)
T 3amr_A 199 ED-----EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN---SSYAIYDRQ 262 (355)
T ss_dssp TT-----TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG---TEEEEEESS
T ss_pred cc-----ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC---CEEEEEECC
Confidence 32 3489999643332100011111111 12333343 56776 555554443 357777764
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.15 Score=53.76 Aligned_cols=184 Identities=10% Similarity=0.034 Sum_probs=98.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+.++++++....+-.. .-.....++..+.+..|+++ +... ..|.+++++++..+.|....-.
T Consensus 60 ~I~r~~~~g~~~~~v~~~--------g~~~P~GlAvD~~~~~LY~t-D~~~--~~I~v~~~dG~~~~~l~~~~l~----- 123 (628)
T 4a0p_A 60 TISRAFMNGSALEHVVEF--------GLDYPEGMAVDWLGKNLYWA-DTGT--NRIEVSKLDGQHRQVLVWKDLD----- 123 (628)
T ss_dssp EEEEEETTSCSCEEEECS--------SCSCCCEEEEETTTTEEEEE-ETTT--TEEEEEETTSTTCEEEECSSCC-----
T ss_pred eEEEEECCCCCcEEEEeC--------CCCCcceEEEEeCCCEEEEE-ECCC--CEEEEEecCCCcEEEEEeCCCC-----
Confidence 356666666544333110 11222345555555544443 3332 2599999998776666431110
Q ss_pred cCCcccCCCCCccCC-CeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 161 HDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~-d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
.|. ....++ ++.+|.++......|++.+++|...+.|..+-.....+ .++++++.||++-... ..|++
T Consensus 124 ----~P~--~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~Gl-alD~~~~~LY~aD~~~----~~I~~ 192 (628)
T 4a0p_A 124 ----SPR--ALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGL-TIDYAKRRLYWTDLDT----NLIES 192 (628)
T ss_dssp ----CEE--EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEE-EEETTTTEEEEEETTT----TEEEE
T ss_pred ----Ccc--cEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceE-EEccccCEEEEEECCC----CEEEE
Confidence 011 011233 45666677644678999999998776665432223344 4899899999986543 46888
Q ss_pred EEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 240 AKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
+++ +|. ..+.+.. ...-...++.. ..+.++ .. .-..|++++..+++..+.+.
T Consensus 193 ~d~--dG~----~~~v~~~~l~~P~glav~~--~~ly~t-D~--~~~~I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 193 SNM--LGL----NREVIADDLPHPFGLTQYQ--DYIYWT-DW--SRRSIERANKTSGQNRTIIQ 245 (628)
T ss_dssp EET--TSC----SCEEEEECCSCEEEEEEET--TEEEEE-ET--TTTEEEEEETTTCCSCEEEE
T ss_pred EcC--CCC----ceEEeeccCCCceEEEEEC--CEEEEe-cC--CCCEEEEEECCCCCceEEEe
Confidence 998 554 2233322 12223334433 344443 22 23478888866665544443
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.069 Score=50.88 Aligned_cols=180 Identities=8% Similarity=-0.024 Sum_probs=81.3
Q ss_pred EEEEEECCCCceEE-EeccCCCCCCCCCCceeEEEEEccC--CeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC--
Q 008274 81 RLGVVSAAGGPVSW-MDLQCGGTDQNYDEEYLARVNWMHG--NILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-- 155 (571)
Q Consensus 81 ~l~~~dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~wspD--g~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-- 155 (571)
.+.+||+.+++... ..+ ......+..+.|+|| |++++...... .|.+.|+.++....+......
T Consensus 82 ~v~iWd~~~~~~~~~~~~-------~~h~~~V~~v~~~p~~~g~~lasgs~D~----~i~lwd~~~~~~~~~~~~~~~h~ 150 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEH-------AGHDSSVNSVCWAPHDYGLILACGSSDG----AISLLTYTGEGQWEVKKINNAHT 150 (316)
T ss_dssp CEEEECCSSSCCCEEEEE-------CCCSSCCCEEEECCTTTCSCEEEECSSS----CEEEEEECSSSCEEECCBTTSSS
T ss_pred EEEEEECCCCcceEEEEc-------cCCCCceEEEEECCCCCCcEEEEEcCCC----CEEEEecCCCCCcceeeeecccc
Confidence 36788988764322 222 223456778999998 66666554333 266666666532111111000
Q ss_pred CeeeccCCcccCCCC-------C-ccCC-CeEEEEEecCCccEEEEEeCCC--ceeeceeecCeEEEEEEEEeecC---c
Q 008274 156 SWVNLHDCFTPLDKG-------V-TKYS-GGFIWASEKTGFRHLYLHDING--TCLGPITEGDWMVEQIVGVNEAS---G 221 (571)
Q Consensus 156 ~w~~~~~~~~~~~~~-------~-~~~~-d~~~~~s~~~g~~~l~~~~~~~--~~~~~lT~~~~~~~~~~~~s~dg---~ 221 (571)
..+. .-.|.|.... . .... ..+++....++.-.||-+...+ .....+......+..+ .|+|++ .
T Consensus 151 ~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v-~~sp~~~~~~ 228 (316)
T 3bg1_A 151 IGCN-AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDV-AWAPSIGLPT 228 (316)
T ss_dssp SCBC-CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEE-ECCCCSSCSC
T ss_pred CCcc-eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEE-EecCCCCCCC
Confidence 0000 0011111000 0 0001 1244444456655566553221 1223344333345555 499986 2
Q ss_pred EEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec-CCCceEEEEECCCCCEEEEEe
Q 008274 222 QVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-NGKGKHVAVLDHNMRNFVDFH 278 (571)
Q Consensus 222 ~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt-~~~g~~~~~~s~~g~~~v~~~ 278 (571)
.+++++..++. ..+|.+.- ..... .....+. .......+.|+|+|++++...
T Consensus 229 ~~las~s~D~~--v~iw~~~~--~~~~~-~~~~~~~~~~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 229 STIASCSQDGR--VFIWTCDD--ASSNT-WSPKLLHKFNDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp CEEEEEETTCE--EEEEECSS--TTCCC-CBCCEEEECSSCEEEEEECTTTCCEEEEE
T ss_pred ceEEEEcCCCe--EEEEEccC--ccccc-hhhhhhhcCCCcEEEEEEcCCCCEEEEEc
Confidence 35555555542 55554321 11100 0112222 223455679999998776543
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0072 Score=56.48 Aligned_cols=143 Identities=13% Similarity=0.052 Sum_probs=78.8
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc--cc--h-------hhhHHHHhCCcEEEEECC
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN--TV--D-------MRAQYLRSKGILVWKLDN 391 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--~~--~-------~~~~~l~~~G~~v~~~d~ 391 (571)
.+...++..+..|++.... .++..|+||++-|||+.......+.. -+ . .....+ .+-..++.+|.
T Consensus 27 yv~v~~~~~lFywf~es~~---~p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW-~~~an~lfiD~ 102 (300)
T 4az3_A 27 YLKGSGSKHLHYWFVESQK---DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSW-NLIANVLYLES 102 (300)
T ss_dssp EEECSTTEEEEEEEECCSS---CTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCG-GGSSEEEEECC
T ss_pred eeecCCCCeEEEEEEEcCC---CCCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccH-HhhhcchhhcC
Confidence 3455667788888776543 23567999999999987642211100 00 0 000001 11246778886
Q ss_pred C-CCCCChhhhHHHHhccCCCCCchhHHHHHHHH-HHcCCCcCCcEEEEeechHHHHHHHHHhc---CC-CeeEEEEEcC
Q 008274 392 R-GTARRGLKFEASIKHNCGRIDAEDQLTGAEWL-IKQGLAKVGHIGLYGWSYGGYLSAITLAR---FP-DVFQCAVSGA 465 (571)
Q Consensus 392 r-G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l-~~~~~~d~~~i~l~G~S~GG~~a~~~~~~---~~-~~~~~~v~~~ 465 (571)
| |.|.+-.... ...........|+..+++.. ...+......+.|.|.||||..+-.++.. .+ -.+++++.+.
T Consensus 103 PvGtGfSy~~~~--~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGN 180 (300)
T 4az3_A 103 PAGVGFSYSDDK--FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGN 180 (300)
T ss_dssp STTSTTCEETTC--CCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEES
T ss_pred CCcccccccCCC--cccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecC
Confidence 6 4443311000 00000000134455555433 33344456789999999999998777643 22 2478889999
Q ss_pred ccCCcc
Q 008274 466 PVTSWD 471 (571)
Q Consensus 466 ~~~~~~ 471 (571)
|+++..
T Consensus 181 g~~d~~ 186 (300)
T 4az3_A 181 GLSSYE 186 (300)
T ss_dssp CCSBHH
T ss_pred CccCHH
Confidence 988753
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.17 Score=47.51 Aligned_cols=104 Identities=12% Similarity=0.077 Sum_probs=53.6
Q ss_pred EEEEEecCCccEEEEEeCCCceeeceee-cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe
Q 008274 178 FIWASEKTGFRHLYLHDINGTCLGPITE-GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL 256 (571)
Q Consensus 178 ~~~~s~~~g~~~l~~~~~~~~~~~~lT~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l 256 (571)
.++....+|. |.+++. +.....+.. ....+..+ .|++++. ++++..++ .++.+++. .+. ....+
T Consensus 157 ~l~~~~~d~~--i~i~d~-~~~~~~~~~~~~~~i~~~-~~~~~~~--~~~~~~dg----~i~i~d~~-~~~----~~~~~ 221 (313)
T 3odt_A 157 KFLTASADKT--IKLWQN-DKVIKTFSGIHNDVVRHL-AVVDDGH--FISCSNDG----LIKLVDMH-TGD----VLRTY 221 (313)
T ss_dssp EEEEEETTSC--EEEEET-TEEEEEECSSCSSCEEEE-EEEETTE--EEEEETTS----EEEEEETT-TCC----EEEEE
T ss_pred EEEEEECCCC--EEEEec-CceEEEEeccCcccEEEE-EEcCCCe--EEEccCCC----eEEEEECC-chh----hhhhh
Confidence 5555555554 445552 233333433 33344555 4899987 44444443 35555662 222 23334
Q ss_pred cC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 257 TN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 257 t~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.. ........++|+++ ++. .+. -..+.+.++.+++....+
T Consensus 222 ~~~~~~i~~~~~~~~~~-l~~-~~~---dg~v~iwd~~~~~~~~~~ 262 (313)
T 3odt_A 222 EGHESFVYCIKLLPNGD-IVS-CGE---DRTVRIWSKENGSLKQVI 262 (313)
T ss_dssp ECCSSCEEEEEECTTSC-EEE-EET---TSEEEEECTTTCCEEEEE
T ss_pred hcCCceEEEEEEecCCC-EEE-Eec---CCEEEEEECCCCceeEEE
Confidence 32 23345668999994 332 222 236888887666654443
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.032 Score=53.99 Aligned_cols=94 Identities=9% Similarity=0.009 Sum_probs=57.4
Q ss_pred EEEEEECCC-CceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAG-GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|.+||+.+ ++.....+ ......+..+.|+|||+.++...... .|.+.|+++++...+......-..
T Consensus 65 ~i~iw~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~dg----~v~iwd~~~~~~~~~~~~~~~v~~- 132 (368)
T 3mmy_A 65 DVRCWEVQDSGQTIPKAQ-------QMHTGPVLDVCWSDDGSKVFTASCDK----TAKMWDLSSNQAIQIAQHDAPVKT- 132 (368)
T ss_dssp EEEEEEECTTSCEEEEEE-------EECSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTTEEEEEEECSSCEEE-
T ss_pred cEEEEEcCCCCceeEEEe-------ccccCCEEEEEECcCCCEEEEEcCCC----cEEEEEcCCCCceeeccccCceEE-
Confidence 468888887 54432322 22456788899999999887665433 488889999987665443322110
Q ss_pred ccCCcccCCCCCcc--CCCe-EEEEEecCCccEEEEEeCCCce
Q 008274 160 LHDCFTPLDKGVTK--YSGG-FIWASEKTGFRHLYLHDINGTC 199 (571)
Q Consensus 160 ~~~~~~~~~~~~~~--~~d~-~~~~s~~~g~~~l~~~~~~~~~ 199 (571)
+ .| ++++ +++....+| .|+++++.+++
T Consensus 133 -------~----~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~ 162 (368)
T 3mmy_A 133 -------I----HWIKAPNYSCVMTGSWDK--TLKFWDTRSSN 162 (368)
T ss_dssp -------E----EEEECSSCEEEEEEETTS--EEEEECSSCSS
T ss_pred -------E----EEEeCCCCCEEEEccCCC--cEEEEECCCCc
Confidence 0 12 3444 555555555 47777766554
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.19 Score=48.01 Aligned_cols=119 Identities=13% Similarity=0.142 Sum_probs=59.1
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECC-CCc-eEEEEEeec-CCeeeccCCcccCCCCCccCCCe-EEEEE
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK-TGQ-RKVILVEEL-DSWVNLHDCFTPLDKGVTKYSGG-FIWAS 182 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~-~g~-~~~l~~~~~-~~w~~~~~~~~~~~~~~~~~~d~-~~~~s 182 (571)
....+..+.|+|||++++...... .|.+.|+. +++ .+.+..... ...+. .+ .|++++ +++..
T Consensus 106 h~~~V~~v~~sp~g~~las~s~D~----~v~iwd~~~~~~~~~~~~~~~~h~~~v~------~v----~~~p~~~~l~s~ 171 (330)
T 2hes_X 106 HENEVKGVAWSNDGYYLATCSRDK----SVWIWETDESGEEYECISVLQEHSQDVK------HV----IWHPSEALLASS 171 (330)
T ss_dssp ---CEEEEEECTTSCEEEEEETTS----CEEEEECCTTCCCCEEEEEECCCSSCEE------EE----EECSSSSEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEeCCC----EEEEEeccCCCCCeEEEEEeccCCCceE------EE----EECCCCCEEEEE
Confidence 445678899999999877765433 26677774 332 222222111 11111 00 234444 66666
Q ss_pred ecCCccEEEEEeCCC-ceeeceeecCeEEEEEEEEeecCc-EEEEEEcCCCCceeEEEEEEe
Q 008274 183 EKTGFRHLYLHDING-TCLGPITEGDWMVEQIVGVNEASG-QVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~-~~~~~lT~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~l~~~~l 242 (571)
..+|.-.||-..... .....+......+... .|+|++. ..++++..++. ..+|.+.-
T Consensus 172 s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~~~l~s~s~D~~--v~iw~~~~ 230 (330)
T 2hes_X 172 SYDDTVRIWKDYDDDWECVAVLNGHEGTVWSS-DFDKTEGVFRLCSGSDDST--VRVWKYMG 230 (330)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEE-EECCSSSSCEEEEEETTSC--EEEEEEEE
T ss_pred cCCCeEEEEECCCCCeeEEEEccCCCCcEEEE-EecCCCCeeEEEEEeCCCe--EEEEEecC
Confidence 666765666543221 1223343333345554 4888842 33445555543 67776653
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.025 Score=56.06 Aligned_cols=56 Identities=13% Similarity=-0.069 Sum_probs=35.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
.+.+||+.++....... .....+..+.|+|++..++.....+. .|.+.|+.+++..
T Consensus 167 tv~~Wd~~~~~~~~~~~--------~~~~~v~~v~~~p~~~~~l~~~~~d~---~v~~wd~~t~~~~ 222 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGY--------PLSSPGISVQFRPSNPNQLIVGERNG---NIRIFDWTLNLSA 222 (393)
T ss_dssp EEEEEEEETTEEEEEEE--------ECSSCEEEEEEETTEEEEEEEEETTS---EEEEEETTCCC--
T ss_pred eEEEEECCCCceeeeec--------CCCCCcEEEEECCCCCceEEecCCCC---EEEEEECCCCccc
Confidence 46889988765433222 23456678999999874444444432 3788899988653
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.028 Score=52.95 Aligned_cols=126 Identities=14% Similarity=0.190 Sum_probs=74.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECC-CCce---EEEEEeecCC
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIK-TGQR---KVILVEELDS 156 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~-~g~~---~~l~~~~~~~ 156 (571)
.|+.++.+ ++.+.+. ........++|+|||+.+ +..... + .|+++|++ +|+. ..+. .....
T Consensus 154 ~l~~~~~~-g~~~~~~---------~~~~~~~gi~~s~dg~~l-v~~~~~-~--~i~~~~~~~~g~~~~~~~~~-~~~~~ 218 (296)
T 3e5z_A 154 WVFRLAPD-GTLSAPI---------RDRVKPNGLAFLPSGNLL-VSDTGD-N--ATHRYCLNARGETEYQGVHF-TVEPG 218 (296)
T ss_dssp EEEEECTT-SCEEEEE---------CCCSSEEEEEECTTSCEE-EEETTT-T--EEEEEEECSSSCEEEEEEEE-CCSSS
T ss_pred EEEEECCC-CCEEEee---------cCCCCCccEEECCCCCEE-EEeCCC-C--eEEEEEECCCCcCcCCCeEe-eCCCC
Confidence 56666665 5444432 123345678999999977 443222 2 48888876 5665 2222 11110
Q ss_pred eeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEE-eecCcEEEEEEcCCCCcee
Q 008274 157 WVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGV-NEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~~ 235 (571)
.+.....++++-++++. ...|++++.++.....++.... +..+. + +++++.||+++. .
T Consensus 219 ----------~p~~i~~d~~G~l~v~~---~~~v~~~~~~g~~~~~~~~~~~-~~~~~-f~~~d~~~L~v~t~------~ 277 (296)
T 3e5z_A 219 ----------KTDGLRVDAGGLIWASA---GDGVHVLTPDGDELGRVLTPQT-TSNLC-FGGPEGRTLYMTVS------T 277 (296)
T ss_dssp ----------CCCSEEEBTTSCEEEEE---TTEEEEECTTSCEEEEEECSSC-CCEEE-EESTTSCEEEEEET------T
T ss_pred ----------CCCeEEECCCCCEEEEc---CCeEEEECCCCCEEEEEECCCC-ceeEE-EECCCCCEEEEEcC------C
Confidence 01112345666445554 3468999988776666765544 44444 6 578899999875 2
Q ss_pred EEEEEEe
Q 008274 236 HLYCAKL 242 (571)
Q Consensus 236 ~l~~~~l 242 (571)
.||++++
T Consensus 278 ~l~~~~~ 284 (296)
T 3e5z_A 278 EFWSIET 284 (296)
T ss_dssp EEEEEEC
T ss_pred eEEEEEc
Confidence 6889887
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.02 Score=59.13 Aligned_cols=236 Identities=10% Similarity=0.020 Sum_probs=105.5
Q ss_pred cccceeeeeccCCCceEEECCCC---------CeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEE
Q 008274 12 GLAEYIAQEEMDRKTGYWWSLDS---------KFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRL 82 (571)
Q Consensus 12 g~~~~~~~~~~~~~~~~~wSPDg---------~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 82 (571)
+.-.|++.. -.....+.|||++ ++||-...+....+ . . +.... + ..+... ..|
T Consensus 124 ~r~~~~~~~-~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~-----~--~-----~~~~~--l-aS~s~D--~tI 185 (524)
T 2j04_B 124 KRRGFIYNV-GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEP-----L--N-----EHLEM--F-DKEKHS--SCI 185 (524)
T ss_dssp CSCEEEEEC-CC--CCCSCEEECCCCSSCSSEEEEEEEEEC---------------------------------C--EEE
T ss_pred CcceEEEEC-CCceeEEEecccCCCCccCcCCeEEEEEEecccCCc-----c--c-----hhhhh--h-ccCCCC--ceE
Confidence 444455442 1345678899998 67877665533210 0 0 11110 1 122222 356
Q ss_pred EEEECCCCceEE---EeccCCCCCCCCCCceeEEEEEccC------CeEEEEEEeccCccEEEEEEECCCCceE---EEE
Q 008274 83 GVVSAAGGPVSW---MDLQCGGTDQNYDEEYLARVNWMHG------NILTAQVLNRSQTKLKVLKFDIKTGQRK---VIL 150 (571)
Q Consensus 83 ~~~dl~~~~~~~---~~~~~~~~~~~~~~~~~~~~~wspD------g~~i~~~~~r~~~~~~i~~~d~~~g~~~---~l~ 150 (571)
.+||+++++... ..+. .....+..++|+|+ +.+|+..+... .|.+.|+.+++.. .+.
T Consensus 186 ~iWd~~~~~~~~~~~~~l~-------~~~~~V~~v~wsp~~~~~~~~~~LAs~s~Dg----tvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 186 QIFKMNTSTLHCVKVQTIV-------HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEG----TINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp EEEEEETTTCCEEEEEEEE-------ECCCSEEEEEECSSCCCSSSSCEEEEEETTS----CEEEEECCCCSSSSSEEEC
T ss_pred EEEEccCCCCCceEEEEEE-------ecCCcEEEEEECCCCCCCCCCceEEEEecCC----eEEEEEcCCCcccccccee
Confidence 777887766321 1121 12345778999997 45666555433 2666677765421 000
Q ss_pred EeecC--CeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCce-e-eceeecCeEEEEEE-EEeecCcEEEE
Q 008274 151 VEELD--SWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-L-GPITEGDWMVEQIV-GVNEASGQVYF 225 (571)
Q Consensus 151 ~~~~~--~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~-~-~~lT~~~~~~~~~~-~~s~dg~~l~~ 225 (571)
.... ........... ..|++++.++....+| .|.++|+.++. . ..+......+..+. .++++|..+++
T Consensus 255 -~~~p~~~l~~h~~~v~s----v~~s~~~~lasgs~Dg--tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~la 327 (524)
T 2j04_B 255 -CEKPSLTLSLADSLITT----FDFLSPTTVVCGFKNG--FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVS 327 (524)
T ss_dssp -CCSCSEEECCTTTCEEE----EEESSSSEEEEEETTS--EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEE
T ss_pred -ecCceEEEEcCCCCEEE----EEecCCCeEEEEeCCC--EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEE
Confidence 0000 00000000000 1233445555555555 46666766442 2 22333344455552 36777745666
Q ss_pred EEcCCCCceeEEEEEEeCCCCCCCCCCCeEec-CCC--ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 226 TGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-NGK--GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 226 ~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt-~~~--g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
++..++- ..|| ++. ++. ....+. ... ....+.|+|+++.++... . . ..+.+.++.++.
T Consensus 328 S~S~D~t--vklW--D~~-~~~----~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~-~-d--~tv~lwd~~~~~ 388 (524)
T 2j04_B 328 TVAVDGY--FYIF--NPK-DIA----TTKTTVSRFRGSNLVPVVYCPQIYSYIYSD-G-A--SSLRAVPSRAAF 388 (524)
T ss_dssp EEETTSE--EEEE--CGG-GHH----HHCEEEEECSCCSCCCEEEETTTTEEEEEC-S-S--SEEEEEETTCTT
T ss_pred EeccCCe--EEEE--ECC-CCC----cccccccccccCcccceEeCCCcCeEEEeC-C-C--CcEEEEECcccc
Confidence 6666552 5554 441 111 111111 111 123468999998765432 2 1 146666665443
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0058 Score=57.29 Aligned_cols=100 Identities=10% Similarity=0.068 Sum_probs=57.8
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
+.-+||.+||... ..+++.+.++.+...+....+.-...|.... .. ..+++.+.++.+.++
T Consensus 73 ~~~iVvafRGT~~--------------~~d~~~d~~~~~~~~~~~~~~~vh~Gf~~~~-~~----~~~~~~~~l~~~~~~ 133 (279)
T 1tia_A 73 NSAVVLAFRGSYS--------------VRNWVADATFVHTNPGLCDGCLAELGFWSSW-KL----VRDDIIKELKEVVAQ 133 (279)
T ss_pred CCEEEEEEeCcCC--------------HHHHHHhCCcEeecCCCCCCCccChhHHHHH-HH----HHHHHHHHHHHHHHH
Confidence 3468888999421 2466777788777655422111111122111 11 134566677766654
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCC----eeEEEEEcCccC
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPVT 468 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~----~~~~~v~~~~~~ 468 (571)
. ...++.+.|||+||.+|..++..... .+.+....+|-.
T Consensus 134 ~--p~~~i~vtGHSLGGalA~l~a~~l~~~g~~~v~~~tfg~Prv 176 (279)
T 1tia_A 134 N--PNYELVVVGHSLGAAVATLAATDLRGKGYPSAKLYAYASPRV 176 (279)
T ss_pred C--CCCeEEEEecCHHHHHHHHHHHHHHhcCCCceeEEEeCCCCC
Confidence 2 23589999999999999988875321 144544455543
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.031 Score=54.96 Aligned_cols=137 Identities=13% Similarity=0.137 Sum_probs=73.1
Q ss_pred EEEEEECCC-CceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAG-GPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+.+||+.. ++.... + ......+..+.|+|||+.++..+... .|.+.|+.+|+...........-..
T Consensus 229 ~v~~wd~~~~~~~~~~-~-------~~h~~~v~~v~~~p~~~~l~s~s~D~----~i~lwd~~~~~~~~~~~~~~~~~~~ 296 (380)
T 3iz6_a 229 TVRLWDLRITSRAVRT-Y-------HGHEGDINSVKFFPDGQRFGTGSDDG----TCRLFDMRTGHQLQVYNREPDRNDN 296 (380)
T ss_dssp CEEEEETTTTCCCCEE-E-------CCCSSCCCEEEECTTSSEEEEECSSS----CEEEEETTTTEEEEEECCCCSSSCC
T ss_pred eEEEEECCCCCcceEE-E-------CCcCCCeEEEEEecCCCeEEEEcCCC----eEEEEECCCCcEEEEeccccccccc
Confidence 367889873 332221 1 23455677899999999877665443 2888899998765543321110000
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee-ecee---e-cCeEEEEEEEEeecCcEEEEEEcCCCCc
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL-GPIT---E-GDWMVEQIVGVNEASGQVYFTGTLDGPL 233 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~-~~lT---~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 233 (571)
..+.. ....+++++ +++....+| .|+++|...++. ..+. . ....+..+ .|+|||+.|+. +..++.
T Consensus 297 ~~~~v----~~~~~s~~g~~l~~g~~dg--~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l-~~s~dg~~l~s-gs~D~~- 367 (380)
T 3iz6_a 297 ELPIV----TSVAFSISGRLLFAGYSNG--DCYVWDTLLAEMVLNLGTLQNSHEGRISCL-GLSSDGSALCT-GSWDKN- 367 (380)
T ss_dssp SSCSC----SEEEECSSSSEEEEECTTS--CEEEEETTTCCEEEEECCSCSSCCCCCCEE-EECSSSSEEEE-ECTTSC-
T ss_pred ccCce----EEEEECCCCCEEEEEECCC--CEEEEECCCCceEEEEecccCCCCCceEEE-EECCCCCEEEE-eeCCCC-
Confidence 00000 011345555 666555555 466677655432 2221 1 22234444 49999987654 444442
Q ss_pred eeEEEE
Q 008274 234 ESHLYC 239 (571)
Q Consensus 234 ~~~l~~ 239 (571)
..+|.
T Consensus 368 -i~iW~ 372 (380)
T 3iz6_a 368 -LKIWA 372 (380)
T ss_dssp -EEEEE
T ss_pred -EEEEe
Confidence 55554
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.087 Score=53.13 Aligned_cols=129 Identities=12% Similarity=0.064 Sum_probs=72.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|.+||+.+++.... + ......+..+.|+|||+.++...... .|.+.|+.+|+......... ..+.
T Consensus 291 ~i~vwd~~~~~~~~~-~-------~~~~~~v~~~~~~~~~~~l~sg~~dg----~i~vwd~~~~~~~~~~~~h~-~~v~- 356 (464)
T 3v7d_B 291 TLIVWDVAQMKCLYI-L-------SGHTDRIYSTIYDHERKRCISASMDT----TIRIWDLENGELMYTLQGHT-ALVG- 356 (464)
T ss_dssp CEEEEETTTTEEEEE-E-------CCCSSCEEEEEEETTTTEEEEEETTS----CEEEEETTTTEEEEEECCCS-SCEE-
T ss_pred eEEEEECCCCcEEEE-e-------cCCCCCEEEEEEcCCCCEEEEEeCCC----cEEEEECCCCcEEEEEeCCC-CcEE-
Confidence 378899998765433 2 23456788899999999877665433 38888999987543322111 1111
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCA 240 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 240 (571)
.+ .+++ .+++....+| .|.++++.++...........+. ...++++++.|+..+ ++ .+...
T Consensus 357 -----~~----~~~~-~~l~s~s~dg--~v~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~--dg----~i~iw 417 (464)
T 3v7d_B 357 -----LL----RLSD-KFLVSAAADG--SIRGWDANDYSRKFSYHHTNLSA-ITTFYVSDNILVSGS--EN----QFNIY 417 (464)
T ss_dssp -----EE----EECS-SEEEEEETTS--EEEEEETTTCCEEEEEECTTCCC-EEEEEECSSEEEEEE--TT----EEEEE
T ss_pred -----EE----EEcC-CEEEEEeCCC--cEEEEECCCCceeeeecCCCCcc-EEEEEeCCCEEEEec--CC----eEEEE
Confidence 00 1232 3555555555 46666766554332222221222 335899998776655 33 34555
Q ss_pred Ee
Q 008274 241 KL 242 (571)
Q Consensus 241 ~l 242 (571)
++
T Consensus 418 d~ 419 (464)
T 3v7d_B 418 NL 419 (464)
T ss_dssp ET
T ss_pred EC
Confidence 66
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.41 Score=48.05 Aligned_cols=187 Identities=9% Similarity=-0.063 Sum_probs=87.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEc--cCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-Ce
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWM--HGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SW 157 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws--pDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w 157 (571)
.+.+||+.+++.... + ......+..+.|+ +|++.++...... .|...|+.+++.......... ..
T Consensus 184 ~i~vwd~~~~~~~~~-~-------~~h~~~v~~l~~~~~~~~~~l~s~s~d~----~i~vwd~~~~~~~~~~~~~~~~~~ 251 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHV-F-------EGHNSTVRCLDIVEYKNIKYIVTGSRDN----TLHVWKLPKESSVPDHGEEHDYPL 251 (464)
T ss_dssp CEEEEETTTTEEEEE-E-------CCCSSCEEEEEEEESSSCEEEEEEETTS----CEEEEECCCCCCC------CCSSE
T ss_pred CEEEEECCCCcEEEE-E-------CCCCCccEEEEEecCCCCCEEEEEcCCC----cEEEeeCCCCcccccccccCCcce
Confidence 378899998875433 2 2245567777887 5777666654433 277778887653321111100 00
Q ss_pred eecc----C----CcccCCCC-CccCCC-eEEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEE
Q 008274 158 VNLH----D----CFTPLDKG-VTKYSG-GFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFT 226 (571)
Q Consensus 158 ~~~~----~----~~~~~~~~-~~~~~d-~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~ 226 (571)
.... + .+..-... ...+++ .+++....+| .|.++++.+++. ..+......+... .|+++++.|+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~sg 328 (464)
T 3v7d_B 252 VFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN--TLIVWDVAQMKCLYILSGHTDRIYST-IYDHERKRCISA 328 (464)
T ss_dssp EESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTS--CEEEEETTTTEEEEEECCCSSCEEEE-EEETTTTEEEEE
T ss_pred EeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCC--eEEEEECCCCcEEEEecCCCCCEEEE-EEcCCCCEEEEE
Confidence 0000 0 00000000 001111 2444444444 467777766553 3333333345555 499999877755
Q ss_pred EcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC-ceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCcee
Q 008274 227 GTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLV 298 (571)
Q Consensus 227 ~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~-g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~ 298 (571)
+. ++ .|+..++. .+. ....+.... ......++ +++++.. +.. ..+.+.++.+++..
T Consensus 329 ~~-dg----~i~vwd~~-~~~----~~~~~~~h~~~v~~~~~~--~~~l~s~-s~d---g~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 329 SM-DT----TIRIWDLE-NGE----LMYTLQGHTALVGLLRLS--DKFLVSA-AAD---GSIRGWDANDYSRK 385 (464)
T ss_dssp ET-TS----CEEEEETT-TTE----EEEEECCCSSCEEEEEEC--SSEEEEE-ETT---SEEEEEETTTCCEE
T ss_pred eC-CC----cEEEEECC-CCc----EEEEEeCCCCcEEEEEEc--CCEEEEE-eCC---CcEEEEECCCCcee
Confidence 54 33 24444552 221 223333222 23333555 4554433 332 26778887666543
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.006 Score=60.47 Aligned_cols=135 Identities=11% Similarity=0.073 Sum_probs=74.9
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccccc---cc-chh------hhHHHHhCCcEEEEECC-CCCCC
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWI---NT-VDM------RAQYLRSKGILVWKLDN-RGTAR 396 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~~-~~~------~~~~l~~~G~~v~~~d~-rG~~~ 396 (571)
.+..+..+.+.... .++..|++++++|||+.+.....+. +. ... ....+ .+-..++.+|. .|.|.
T Consensus 26 ~~~~lfy~f~~s~~---~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW-~~~an~lfiDqPvGtGf 101 (421)
T 1cpy_A 26 EDKHFFFWTFESRN---DPAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSW-NSNATVIFLDQPVNVGF 101 (421)
T ss_dssp TTEEEEEEEECCSS---CTTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCG-GGGSEEECCCCSTTSTT
T ss_pred CCcEEEEEEEEeCC---CCCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCccc-ccccCEEEecCCCcccc
Confidence 46678777776543 2356799999999999764321110 00 000 00001 11246788885 46654
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHH-cCCCcC--CcEEEEeechHHHHHHHHHhc---CC---CeeEEEEEcCcc
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIK-QGLAKV--GHIGLYGWSYGGYLSAITLAR---FP---DVFQCAVSGAPV 467 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~--~~i~l~G~S~GG~~a~~~~~~---~~---~~~~~~v~~~~~ 467 (571)
+-..-. ....-....+|+.++++.+.+ .+.... .++.|.|.||||..+-.++.. +. -.+++++.+.|+
T Consensus 102 Sy~~~~---~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~ 178 (421)
T 1cpy_A 102 SYSGSS---GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGL 178 (421)
T ss_dssp CEESSC---CCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCC
T ss_pred cCCCCC---CCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCcc
Confidence 421100 000000124566666655444 354455 789999999999988766643 21 236788888887
Q ss_pred CC
Q 008274 468 TS 469 (571)
Q Consensus 468 ~~ 469 (571)
++
T Consensus 179 ~d 180 (421)
T 1cpy_A 179 TD 180 (421)
T ss_dssp CC
T ss_pred cC
Confidence 65
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0096 Score=54.77 Aligned_cols=146 Identities=17% Similarity=0.117 Sum_probs=78.4
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeec-cccc---c-cch-------hhhHHHHhCCcEEEE
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVC-DSWI---N-TVD-------MRAQYLRSKGILVWK 388 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~---~-~~~-------~~~~~l~~~G~~v~~ 388 (571)
.+.+....+..+..|.+..... .++..|+|++++|||+..... ..+. + ... .....+ .+-..++.
T Consensus 28 yv~v~~~~~~~lFywf~es~~~--~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW-~~~anllf 104 (270)
T 1gxs_A 28 YVTIDDNNGRALYYWFQEADTA--DPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAW-NKAANILF 104 (270)
T ss_dssp EEEEETTTTEEEEEEEECCCSS--CGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCG-GGTSEEEE
T ss_pred EEEcCCCCCcEEEEEEEEecCC--CCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccch-hccccEEE
Confidence 3555555567788887765221 235679999999999986532 1110 0 000 000001 12357889
Q ss_pred ECC-CCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH-cCCCcCCcEEEEeechHHHHHHHHH--hcCC-----CeeE
Q 008274 389 LDN-RGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK-QGLAKVGHIGLYGWSYGGYLSAITL--ARFP-----DVFQ 459 (571)
Q Consensus 389 ~d~-rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~~--~~~~-----~~~~ 459 (571)
+|. .|.|.+-..-. ......-....+|+.++++...+ .+.....++.|.|.| |=++...+. .++. -.++
T Consensus 105 iDqPvGtGfSy~~~~-~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLk 182 (270)
T 1gxs_A 105 AESPAGVGFSYSNTS-SDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQ 182 (270)
T ss_dssp ECCSTTSTTCEESSG-GGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEE
T ss_pred EeccccccccCCCCC-ccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeee
Confidence 995 56665421111 00000000014556666654444 344556789999999 655543332 1221 3578
Q ss_pred EEEEcCccCCcc
Q 008274 460 CAVSGAPVTSWD 471 (571)
Q Consensus 460 ~~v~~~~~~~~~ 471 (571)
+++.++|+++..
T Consensus 183 Gi~ign~~~d~~ 194 (270)
T 1gxs_A 183 GLLVSSGLTNDH 194 (270)
T ss_dssp EEEEESCCCBHH
T ss_pred eEEEeCCccChh
Confidence 999999998753
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0038 Score=63.35 Aligned_cols=63 Identities=11% Similarity=0.060 Sum_probs=48.1
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHH---------------------------c-C-----CCeeEEEcCCCCCCCCC
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVA---------------------------A-R-----KPYEILIFPDERHMPRR 552 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~---------------------------~-~-----~~~~~~~~~~~~H~~~~ 552 (571)
.++||.+|..|.+|+...++.+.++|.= . | .+.++..+.++||.. .
T Consensus 373 irVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmV-P 451 (483)
T 1ac5_A 373 IEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMV-P 451 (483)
T ss_dssp CEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSH-H
T ss_pred ceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccC-c
Confidence 5999999999999999999999888850 0 1 257788899999986 2
Q ss_pred CCcHHHHHHHHHHHHHH
Q 008274 553 HRDRIYMEERIWEFIER 569 (571)
Q Consensus 553 ~~~~~~~~~~i~~fl~~ 569 (571)
....+..++.+-.||..
T Consensus 452 ~dqP~~al~m~~~fl~~ 468 (483)
T 1ac5_A 452 FDKSLVSRGIVDIYSND 468 (483)
T ss_dssp HHCHHHHHHHHHHHTTC
T ss_pred chhHHHHHHHHHHHHCC
Confidence 34466667777777753
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.092 Score=52.03 Aligned_cols=60 Identities=8% Similarity=0.030 Sum_probs=36.7
Q ss_pred EEEEEEECCCCceEE-EeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc----------------CccEEEEEEECC
Q 008274 80 VRLGVVSAAGGPVSW-MDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS----------------QTKLKVLKFDIK 142 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~----------------~~~~~i~~~d~~ 142 (571)
..|.++|.++++.+. +... ......-.++.|+||++.++.. +.. +....|..+|.+
T Consensus 164 g~v~vlD~~T~~v~~~~~~~------~~~~~~~Yd~~~~p~~~~mvsS-~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~ 236 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEID------RGDQYLAYDFWWNLPNEVLVSS-EWAVPNTIEDGLKLEHLKDRYGNRIHFWDLR 236 (462)
T ss_dssp CEEEEECTTTCCEEEECCSB------CTTCCCCCCEEEETTTTEEEEC-BCCCHHHHTTCCCTTTHHHHSCCEEEEEETT
T ss_pred CeEEEEECCCCeEEEEEccC------CCCccccceEEECCCCCEEEEc-cCcCccccccccchhhhhhccCCEEEEEECC
Confidence 368999999888653 2221 1122334467899999954443 311 123469999999
Q ss_pred CCce
Q 008274 143 TGQR 146 (571)
Q Consensus 143 ~g~~ 146 (571)
+++.
T Consensus 237 ~~k~ 240 (462)
T 2ece_A 237 KRKR 240 (462)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 8754
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.051 Score=51.81 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=49.9
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEE-eccCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWM-DLQCGGTD 103 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~-~~~~~~~~ 103 (571)
...+.|||||++||-...+ + .+.+||+.+++...+ ++
T Consensus 16 V~~v~~s~~g~~lasgs~D-~-----------------------------------~v~lwd~~~~~~~~~~~l------ 53 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSD-R-----------------------------------SVKIFDVRNGGQILIADL------ 53 (316)
T ss_dssp EEEEEECGGGCEEEEEETT-T-----------------------------------EEEEEEEETTEEEEEEEE------
T ss_pred EEEeeEcCCCCEEEEEeCC-C-----------------------------------eEEEEEecCCCcEEEEEE------
Confidence 3568899999988654322 1 467888887653322 22
Q ss_pred CCCCCceeEEEEEccC--CeEEEEEEeccCccEEEEEEECCCCceEEE
Q 008274 104 QNYDEEYLARVNWMHG--NILTAQVLNRSQTKLKVLKFDIKTGQRKVI 149 (571)
Q Consensus 104 ~~~~~~~~~~~~wspD--g~~i~~~~~r~~~~~~i~~~d~~~g~~~~l 149 (571)
......+..+.|+|+ |+.++...... .|.+.|+++++.+.+
T Consensus 54 -~gH~~~V~~v~~~~~~~~~~l~s~s~D~----~v~iWd~~~~~~~~~ 96 (316)
T 3bg1_A 54 -RGHEGPVWQVAWAHPMYGNILASCSYDR----KVIIWREENGTWEKS 96 (316)
T ss_dssp -ECCSSCEEEEEECCGGGSSCEEEEETTS----CEEEECCSSSCCCEE
T ss_pred -cCCCccEEEEEeCCCCCCCEEEEEECCC----EEEEEECCCCcceEE
Confidence 234567888999864 77766655333 277778888764333
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.26 Score=53.33 Aligned_cols=184 Identities=11% Similarity=0.059 Sum_probs=98.5
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCC----ceEEEEEeecCCe
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTG----QRKVILVEELDSW 157 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g----~~~~l~~~~~~~w 157 (571)
|..+++++++...+.. .......+.|.+.+..|++ ++..++ .|+++++++. ..+.+.....
T Consensus 406 Ir~i~l~~~~~~~l~~---------~~~~~~gl~~d~~~~~lY~-sD~~~~--~I~~~~l~g~~~~~~~~~vi~~~l--- 470 (791)
T 3m0c_C 406 VRKMTLDRSEYTSLIP---------NLRNVVALDTEVASNRIYW-SDLSQR--MICSTQLDRAHGVSSYDTVISRDI--- 470 (791)
T ss_dssp EEEECTTSCCCEEEEC---------SCSSEEEEEEETTTTEEEE-EETTTT--EEEEEEC--------CEEEECSSC---
T ss_pred eeEeeccCCcceeeec---------CCCceEEEeecccCCeeEE-eeccce--eEEEEeccCCCCCcceeEEEecCC---
Confidence 4455565554444422 2334566788885544433 343322 5889888863 2233322110
Q ss_pred eeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 158 VNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
..|......|..+.+|| ++. +...|++++++|...+.|..... ....+. +++.++.||++-.... ..
T Consensus 471 ------~~P~GLAvD~~~~~LY~-tD~-~~~~I~v~~ldG~~~~~l~~~~l~~P~gIa-VDp~~g~LYwtD~g~~---~~ 538 (791)
T 3m0c_C 471 ------QAPDGLAVDWIHSNIYW-TDS-VLGTVSVADTKGVKRKTLFRENGSKPRAIV-VDPVHGFMYWTDWGTP---AK 538 (791)
T ss_dssp ------SCCCEEEEETTTTEEEE-EET-TTTEEEEEETTSSSEEEEEECTTCCEEEEE-EETTTTEEEEEECSSS---CE
T ss_pred ------CCcceeeeeecCCcEEE-Eec-CCCeEEEEeCCCCeEEEEEeCCCCCcceEE-EecCCCCEEEecCCCC---Ce
Confidence 00111111223333554 444 34579999999887666654332 234454 8998899999864332 57
Q ss_pred EEEEEeCCCCCCCCCCCeEecCC--CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNG--KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~--~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
|+++++ +|. ..+.+... ..-...++++.+..|.++= . ....|.++++ +|...+.+.
T Consensus 539 I~~~~~--dG~----~~~~lv~~~l~~P~GLavD~~~~~LYwaD-~--~~~~I~~~d~-dG~~~~~v~ 596 (791)
T 3m0c_C 539 IKKGGL--NGV----DIYSLVTENIQWPNGITLDLLSGRLYWVD-S--KLHSISSIDV-NGGNRKTIL 596 (791)
T ss_dssp EEEEET--TSC----CEEEEECSSCSCEEEEEEETTTTEEEEEE-T--TTTEEEEEET-TSCSCEEEE
T ss_pred EEEEec--CCC----ceEEEEeCCCCCceEEEEecCCCeEEEEe-C--CCCcEEEEec-CCCceEEEe
Confidence 899998 664 33333322 2234557887777666543 2 3458999998 455444443
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.47 Score=44.05 Aligned_cols=225 Identities=8% Similarity=-0.046 Sum_probs=115.7
Q ss_pred eeeeeecccceeeeecc-CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEE
Q 008274 6 HVLQTHGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGV 84 (571)
Q Consensus 6 ~~~~~~g~~~~~~~~~~-~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~ 84 (571)
.++.-+|..-|-+..+- .....++.+|||+.++ +.+ ..++.
T Consensus 19 ~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~------------------------------------~~V~~ 60 (276)
T 3no2_A 19 IINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYS------------------------------------KGAKM 60 (276)
T ss_dssp EEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECB------------------------------------SEEEE
T ss_pred EEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCC------------------------------------CCEEE
Confidence 34555788888876543 3466788899998655 211 13577
Q ss_pred EECCCCce-EEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCC
Q 008274 85 VSAAGGPV-SWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDC 163 (571)
Q Consensus 85 ~dl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~ 163 (571)
+|. +|+. ..+.. +.......+.++|||+.++..... ...|+.+|.++.....+.-.... . ..
T Consensus 61 ~d~-~G~~~W~~~~--------~~~~~~~~~~~~~dG~~lv~~~~~---~~~v~~vd~~Gk~l~~~~~~~~~---~--~~ 123 (276)
T 3no2_A 61 ITR-DGRELWNIAA--------PAGCEMQTARILPDGNALVAWCGH---PSTILEVNMKGEVLSKTEFETGI---E--RP 123 (276)
T ss_dssp ECT-TSCEEEEEEC--------CTTCEEEEEEECTTSCEEEEEEST---TEEEEEECTTSCEEEEEEECCSC---S--SG
T ss_pred ECC-CCCEEEEEcC--------CCCccccccEECCCCCEEEEecCC---CCEEEEEeCCCCEEEEEeccCCC---C--cc
Confidence 777 4443 33322 122356678899999977665431 23588889865444443221110 0 00
Q ss_pred cccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 164 FTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 164 ~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
+.+.. .....+++ +++.... ...|+.++++|.....+..+... .... ..++|+.++... .. ..|+.++.
T Consensus 124 ~~~~~-~v~~~~~G~~lv~~~~--~~~v~~~d~~G~~~w~~~~~~~~-~~~~-~~~~g~~~v~~~-~~----~~v~~~d~ 193 (276)
T 3no2_A 124 HAQFR-QINKNKKGNYLVPLFA--TSEVREIAPNGQLLNSVKLSGTP-FSSA-FLDNGDCLVACG-DA----HCFVQLNL 193 (276)
T ss_dssp GGSCS-CCEECTTSCEEEEETT--TTEEEEECTTSCEEEEEECSSCC-CEEE-ECTTSCEEEECB-TT----SEEEEECT
T ss_pred ccccc-CceECCCCCEEEEecC--CCEEEEECCCCCEEEEEECCCCc-ccee-EcCCCCEEEEeC-CC----CeEEEEeC
Confidence 00000 00123344 5544332 34688999886555555443221 1222 566776555433 22 24777776
Q ss_pred CCCCCCCCCCCeEecCC--C-----ceEEEEECCCCCEEEEEeeCCC------CCCEEEEEEcCCCceeEec
Q 008274 243 YPDWNHTLEAPVKLTNG--K-----GKHVAVLDHNMRNFVDFHDSLD------SPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 243 ~~~g~~~~~~~~~lt~~--~-----g~~~~~~s~~g~~~v~~~s~~~------~p~~l~~~~~~~~~~~~~l 301 (571)
. +|. ..-++... + ......+.++|..++..+.+-. ..+.++-++. +++.+..+
T Consensus 194 ~-tG~----~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~-~g~~~W~~ 259 (276)
T 3no2_A 194 E-SNR----IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS-EGKVVWQL 259 (276)
T ss_dssp T-TCC----EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT-TSBEEEEE
T ss_pred c-CCc----EEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECC-CCCEEEEe
Confidence 2 143 22222110 1 1244567889987776653321 3456776654 66644443
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.57 Score=44.65 Aligned_cols=137 Identities=13% Similarity=0.151 Sum_probs=66.1
Q ss_pred EEEEECCCCceEEEe-ccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc-----eEEEEEeec-
Q 008274 82 LGVVSAAGGPVSWMD-LQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ-----RKVILVEEL- 154 (571)
Q Consensus 82 l~~~dl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~-----~~~l~~~~~- 154 (571)
+.+||+.++....+. +.. ......+..+.|+|||++++...... . |.+.|++++. .+.+.....
T Consensus 36 i~lw~~~~~~~~~~~~~~~-----~~h~~~v~~v~~sp~~~~las~s~D~--~--v~iw~~~~~~~~~~~~~~~~~~~~h 106 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDE-----TAHKKAIRSVAWRPHTSLLAAGSFDS--T--VSIWAKEESADRTFEMDLLAIIEGH 106 (330)
T ss_dssp EEEEECSSSCCEEEEEECT-----TCCCSCEEEEEECTTSSEEEEEETTS--C--EEEEEC-------CCCEEEEEEC--
T ss_pred EEEEEecCCCeEEEEEEec-----CCccCCEEEEEECCCCCEEEEEeCCC--c--EEEEEcccCcCccccceeEEEEcCC
Confidence 577888875433221 110 11345688899999999877665433 2 5555654321 111111110
Q ss_pred CCeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCce---eeceeecCeEEEEEEEEeecCcEEEEEEcCC
Q 008274 155 DSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTC---LGPITEGDWMVEQIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 155 ~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~---~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~ 230 (571)
...+. .+ .+++++ +++....+|.-.||-++..+.. ...+......+..+. |+|+++.|+..+. +
T Consensus 107 ~~~V~------~v----~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~-~~p~~~~l~s~s~-D 174 (330)
T 2hes_X 107 ENEVK------GV----AWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI-WHPSEALLASSSY-D 174 (330)
T ss_dssp --CEE------EE----EECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE-ECSSSSEEEEEET-T
T ss_pred CCcEE------EE----EECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE-ECCCCCEEEEEcC-C
Confidence 01110 01 234554 5555556665444443222221 223333344455554 9999986655544 4
Q ss_pred CCceeEEEEEE
Q 008274 231 GPLESHLYCAK 241 (571)
Q Consensus 231 ~~~~~~l~~~~ 241 (571)
+. ..+|...
T Consensus 175 ~~--i~iW~~~ 183 (330)
T 2hes_X 175 DT--VRIWKDY 183 (330)
T ss_dssp SC--EEEEEEE
T ss_pred Ce--EEEEECC
Confidence 32 6666543
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.17 Score=50.21 Aligned_cols=118 Identities=16% Similarity=0.186 Sum_probs=60.3
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCC-CeEEEEEecCCcc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFR 188 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~ 188 (571)
....++++|++..|++ .... ..|+++|.+++..+.+......+ .....|. ....+++ ++.+++++. +..
T Consensus 220 ~p~~iav~p~~g~lyv-~d~~---~~I~~~d~~~~~~~~~~~~~~~g----~~~~~P~-~~ia~~p~~g~lyv~d~-~~~ 289 (409)
T 3hrp_A 220 KIGAVALDETEEWLYF-VDSN---KNFGRFNVKTQEVTLIKQLELSG----SLGTNPG-PYLIYYFVDSNFYMSDQ-NLS 289 (409)
T ss_dssp CCCBCEECTTSSEEEE-ECTT---CEEEEEETTTCCEEEEEECCCCS----CCCCSSC-CEEEEETTTTEEEEEET-TTT
T ss_pred CcEEEEEeCCCCeEEE-EECC---CcEEEEECCCCCEEEEecccccC----CCCCCcc-ccEEEeCCCCEEEEEeC-CCC
Confidence 3345789994433444 3332 26999999998765442211110 0001111 0123445 455566655 345
Q ss_pred EEEEEeCCCceeeceeec------C-------eE-EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 189 HLYLHDINGTCLGPITEG------D-------WM-VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 189 ~l~~~~~~~~~~~~lT~~------~-------~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
.|++++.++......... + +. ...+ .++++|+ ||++-...+ ..|+++++
T Consensus 290 ~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gi-a~d~dG~-lyvad~~~~---~~I~~~~~ 352 (409)
T 3hrp_A 290 SVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGM-TVDEDGN-FYIVDGFKG---YCLRKLDI 352 (409)
T ss_dssp EEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEE-EECTTCC-EEEEETTTT---CEEEEEET
T ss_pred EEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEE-EEeCCCC-EEEEeCCCC---CEEEEEEC
Confidence 799998876532222111 0 11 2334 4899987 777643122 56777774
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.33 Score=48.58 Aligned_cols=172 Identities=11% Similarity=0.039 Sum_probs=90.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|.+||+.+++.... + ......+..+.| |++.++...... .|...|+.+++.......... ...
T Consensus 260 ~i~iwd~~~~~~~~~-~-------~~~~~~v~~~~~--~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~-~v~- 323 (445)
T 2ovr_B 260 MVKVWDPETETCLHT-L-------QGHTNRVYSLQF--DGIHVVSGSLDT----SIRVWDVETGNCIHTLTGHQS-LTS- 323 (445)
T ss_dssp CEEEEEGGGTEEEEE-E-------CCCSSCEEEEEE--CSSEEEEEETTS----CEEEEETTTCCEEEEECCCCS-CEE-
T ss_pred EEEEEECCCCcEeEE-e-------cCCCCceEEEEE--CCCEEEEEeCCC----eEEEEECCCCCEEEEEcCCcc-cEE-
Confidence 478889988765432 2 123456667777 787776665433 388899999876433221111 110
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCce-eeceee---cCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTC-LGPITE---GDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~-~~~lT~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
.+ .+++ .+++....+| .|.++++.+++ ...+.. ....+..+. | +++.|+..+ .++ ...
T Consensus 324 --~~-------~~~~-~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~-~--~~~~l~s~~-~dg--~v~ 385 (445)
T 2ovr_B 324 --GM-------ELKD-NILVSGNADS--TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ-F--NKNFVITSS-DDG--TVK 385 (445)
T ss_dssp --EE-------EEET-TEEEEEETTS--CEEEEETTTCCEEEEECSTTSCSSCEEEEE-E--CSSEEEEEE-TTS--EEE
T ss_pred --EE-------EEeC-CEEEEEeCCC--eEEEEECCCCcEEEEEccCCCCCCCEEEEE-E--CCCEEEEEe-CCC--eEE
Confidence 01 1122 2555555555 46666765544 333432 222333332 4 566555444 343 244
Q ss_pred EEEEEeCCCCCCCCCCCeEec------CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 237 LYCAKLYPDWNHTLEAPVKLT------NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt------~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
+ .++. .+. ....+. .......+.++|++..++......+.+..++++++.
T Consensus 386 i--wd~~-~~~----~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 386 L--WDLK-TGE----FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp E--EETT-TCC----EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred E--EECC-CCc----eeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 4 4552 222 233331 112245568999998777666555557788888874
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.079 Score=49.45 Aligned_cols=181 Identities=8% Similarity=-0.034 Sum_probs=94.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+++|.++|+..+-.. .........+.++|||++++ +.. ..|+.+|. +|+..--.+.........
T Consensus 16 ~v~~~d~~tG~~~w~~~-------~~~~~~~~~~~~~pdG~ilv--s~~----~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYP-------LEKGWECNSVAATKAGEILF--SYS----KGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp EEEEEETTTTEEEEEEE-------CCTTCCCCEEEECTTSCEEE--ECB----SEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred EEEEEECCCCeEEEEeC-------CCccCCCcCeEECCCCCEEE--eCC----CCEEEECC-CCCEEEEEcCCCCccccc
Confidence 57899998888754321 11112345578999999766 222 24999999 565322222111111100
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecC------eEEEEEEEEeecCcEEEEEEcCCCCc
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGD------WMVEQIVGVNEASGQVYFTGTLDGPL 233 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~------~~~~~~~~~s~dg~~l~~~~~~~~~~ 233 (571)
. ...+|+ +++. +......++.++.+|+....+.... ..... +..+++|+.|+.. ..+
T Consensus 82 ---~-------~~~~dG~~lv~-~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~-v~~~~~G~~lv~~-~~~--- 145 (276)
T 3no2_A 82 ---A-------RILPDGNALVA-WCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQ-INKNKKGNYLVPL-FAT--- 145 (276)
T ss_dssp ---E-------EECTTSCEEEE-EESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSC-CEECTTSCEEEEE-TTT---
T ss_pred ---c-------EECCCCCEEEE-ecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccC-ceECCCCCEEEEe-cCC---
Confidence 0 123444 4433 3322456888888776554443211 00111 2357788866543 222
Q ss_pred eeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 234 ESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 234 ~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
..++.++. .|. ..-........+...+.++|+.++....+ ..++.++..+|+.+..+.
T Consensus 146 -~~v~~~d~--~G~----~~w~~~~~~~~~~~~~~~~g~~~v~~~~~----~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 146 -SEVREIAP--NGQ----LLNSVKLSGTPFSSAFLDNGDCLVACGDA----HCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp -TEEEEECT--TSC----EEEEEECSSCCCEEEECTTSCEEEECBTT----SEEEEECTTTCCEEEEEE
T ss_pred -CEEEEECC--CCC----EEEEEECCCCccceeEcCCCCEEEEeCCC----CeEEEEeCcCCcEEEEec
Confidence 35667776 443 22222222223445678888877654322 378888987788766654
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.47 Score=49.94 Aligned_cols=179 Identities=12% Similarity=0.049 Sum_probs=101.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|..+|+++.+...+.. ...-.....+.|.+++..|+. ++... ..|++++++++..+.+......
T Consensus 16 ~I~~i~l~~~~~~~~~~-------~~~~~~~~~l~~d~~~~~lyw-tD~~~--~~I~r~~~~g~~~~~v~~~g~~----- 80 (628)
T 4a0p_A 16 DIRRISLETNNNNVAIP-------LTGVKEASALDFDVTDNRIYW-TDISL--KTISRAFMNGSALEHVVEFGLD----- 80 (628)
T ss_dssp EEEEEESSCTTCEEECC-------CCSCSCEEEEEEETTTTEEEE-EETTT--TEEEEEETTSCSCEEEECSSCS-----
T ss_pred cEEEEECCCCCcceEEE-------cCCCCceEEEEEECCCCEEEE-EECCC--CeEEEEECCCCCcEEEEeCCCC-----
Confidence 57888888765432211 112345667899987655444 34332 2599999998776655432100
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCeE-EEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
.|......|..+.+||. +. +...|.+++++|...+.|...... ...+ .++|.++.||++-... ...|++
T Consensus 81 ----~P~GlAvD~~~~~LY~t-D~-~~~~I~v~~~dG~~~~~l~~~~l~~P~~i-avdp~~G~lY~tD~g~---~~~I~r 150 (628)
T 4a0p_A 81 ----YPEGMAVDWLGKNLYWA-DT-GTNRIEVSKLDGQHRQVLVWKDLDSPRAL-ALDPAEGFMYWTEWGG---KPKIDR 150 (628)
T ss_dssp ----CCCEEEEETTTTEEEEE-ET-TTTEEEEEETTSTTCEEEECSSCCCEEEE-EEETTTTEEEEEECSS---SCEEEE
T ss_pred ----CcceEEEEeCCCEEEEE-EC-CCCEEEEEecCCCcEEEEEeCCCCCcccE-EEccCCCeEEEeCCCC---CCEEEE
Confidence 11111112333445553 44 346799999988766555433322 3344 4888888999986432 368999
Q ss_pred EEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 240 AKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
+++ +|. ..+.+.. ...-...+++++++.+.+.=. ....|+++++.
T Consensus 151 ~~~--dG~----~~~~l~~~~~~P~GlalD~~~~~LY~aD~---~~~~I~~~d~d 196 (628)
T 4a0p_A 151 AAM--DGS----ERTTLVPNVGRANGLTIDYAKRRLYWTDL---DTNLIESSNML 196 (628)
T ss_dssp EET--TSC----SCEEEECSCSSEEEEEEETTTTEEEEEET---TTTEEEEEETT
T ss_pred EeC--CCC----ceEEEECCCCCcceEEEccccCEEEEEEC---CCCEEEEEcCC
Confidence 998 665 3334332 223345578887766655432 23467777763
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=96.46 E-value=0.11 Score=47.93 Aligned_cols=171 Identities=9% Similarity=0.089 Sum_probs=78.9
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+++|..++....+.. ........+++++||++++ .. .. ..|+++|.+++..+.+.... ...
T Consensus 47 ~i~~~~~~~~~~~~~~~--------~~~~~p~~i~~~~~g~l~v-~~-~~---~~i~~~d~~~~~~~~~~~~~-~~~--- 109 (270)
T 1rwi_B 47 RVVKLATGSTGTTVLPF--------NGLYQPQGLAVDGAGTVYV-TD-FN---NRVVTLAAGSNNQTVLPFDG-LNY--- 109 (270)
T ss_dssp EEEEECC-----EECCC--------CSCCSCCCEEECTTCCEEE-EE-TT---TEEEEECTTCSCCEECCCCS-CSS---
T ss_pred cEEEecCCCcccceEee--------CCcCCcceeEECCCCCEEE-Ec-CC---CEEEEEeCCCceEeeeecCC-cCC---
Confidence 45666665554333211 1112344578999998333 32 22 25999999887654331110 000
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
+ .....++++-+|+++.. ...|++++..+........... ....+ .++++|+ ||++.... ..|++
T Consensus 110 -----p--~~i~~~~~g~l~v~~~~-~~~i~~~~~~~~~~~~~~~~~~~~p~~i-~~~~~g~-l~v~~~~~----~~i~~ 175 (270)
T 1rwi_B 110 -----P--EGLAVDTQGAVYVADRG-NNRVVKLAAGSKTQTVLPFTGLNDPDGV-AVDNSGN-VYVTDTDN----NRVVK 175 (270)
T ss_dssp -----E--EEEEECTTCCEEEEEGG-GTEEEEECTTCCSCEECCCCSCCSCCCE-EECTTCC-EEEEEGGG----TEEEE
T ss_pred -----C--cceEECCCCCEEEEECC-CCEEEEEECCCceeEeeccccCCCceeE-EEeCCCC-EEEEECCC----CEEEE
Confidence 0 00122344434444432 2357777654433222222211 12233 3788886 77765432 46777
Q ss_pred EEeCCCCCCCCCCCeEecCC--CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 240 AKLYPDWNHTLEAPVKLTNG--KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~~--~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
++. ++. ........ .......++++|..++. ... ...+++++.
T Consensus 176 ~~~--~~~----~~~~~~~~~~~~p~~i~~d~~g~l~v~--~~~--~~~v~~~~~ 220 (270)
T 1rwi_B 176 LEA--ESN----NQVVLPFTDITAPWGIAVDEAGTVYVT--EHN--TNQVVKLLA 220 (270)
T ss_dssp ECT--TTC----CEEECCCSSCCSEEEEEECTTCCEEEE--ETT--TSCEEEECT
T ss_pred Eec--CCC----ceEeecccCCCCceEEEECCCCCEEEE--ECC--CCcEEEEcC
Confidence 776 442 22222111 23345678888843332 221 235777765
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.56 Score=43.47 Aligned_cols=187 Identities=13% Similarity=0.111 Sum_probs=89.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEE-ccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNW-MHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~w-spDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|.++|.++...+.+... +. ..........+++ .++|++++.... ....|+++|.++...+.+ .......
T Consensus 52 ~i~~~d~~g~~~~~~~~~-~~--~~~~~~~p~~i~~~~~~g~l~v~~~~---~~~~i~~~d~~g~~~~~~-~~~~~~~-- 122 (286)
T 1q7f_A 52 RIQIFDKEGRFKFQFGEC-GK--RDSQLLYPNRVAVVRNSGDIIVTERS---PTHQIQIYNQYGQFVRKF-GATILQH-- 122 (286)
T ss_dssp EEEEECTTSCEEEEECCB-SS--STTCBSSEEEEEEETTTTEEEEEECG---GGCEEEEECTTSCEEEEE-CTTTCSC--
T ss_pred EEEEECCCCcEEEEeccc-CC--CcccccCceEEEEEcCCCeEEEEcCC---CCCEEEEECCCCcEEEEe-cCccCCC--
Confidence 467777775443333211 00 0011234567788 577764443221 123588899544322222 1100000
Q ss_pred ccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceee-cCe-EEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITE-GDW-MVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~-~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
+ .....++++-+++++. +...|++++.++.....+.. +.. ....+ .++++|+ ||++.... ..|
T Consensus 123 ------~--~~i~~~~~g~l~v~~~-~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i-~~~~~g~-l~v~~~~~----~~i 187 (286)
T 1q7f_A 123 ------P--RGVTVDNKGRIIVVEC-KVMRVIIFDQNGNVLHKFGCSKHLEFPNGV-VVNDKQE-IFISDNRA----HCV 187 (286)
T ss_dssp ------E--EEEEECTTSCEEEEET-TTTEEEEECTTSCEEEEEECTTTCSSEEEE-EECSSSE-EEEEEGGG----TEE
T ss_pred ------c--eEEEEeCCCCEEEEEC-CCCEEEEEcCCCCEEEEeCCCCccCCcEEE-EECCCCC-EEEEECCC----CEE
Confidence 0 0012244443444433 23468899887765555532 121 23444 4888876 66665433 456
Q ss_pred EEEEeCCCCCCCCCCCeEecCC---CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNG---KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~---~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
++++. ++. ....+... .......++++|+.++....+ -..+.+++. +++.++.+
T Consensus 188 ~~~~~--~g~----~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~---~~~i~~~~~-~g~~~~~~ 244 (286)
T 1q7f_A 188 KVFNY--EGQ----YLRQIGGEGITNYPIGVGINSNGEILIADNHN---NFNLTIFTQ-DGQLISAL 244 (286)
T ss_dssp EEEET--TCC----EEEEESCTTTSCSEEEEEECTTCCEEEEECSS---SCEEEEECT-TSCEEEEE
T ss_pred EEEcC--CCC----EEEEEccCCccCCCcEEEECCCCCEEEEeCCC---CEEEEEECC-CCCEEEEE
Confidence 77776 443 23334322 233456888998644432211 126777774 45544443
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.2 Score=52.62 Aligned_cols=163 Identities=13% Similarity=0.126 Sum_probs=88.1
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCC-CeEEEEEecCCcc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFR 188 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~ 188 (571)
....++..+.+..++++ +... ..|.+++++++..+.|....-. .|. ....++ ++.+|+++.....
T Consensus 85 ~P~GlAvD~~~~~ly~~-d~~~--~~I~v~~~dG~~~~~l~~~~l~---------~P~--~Iavdp~~g~ly~tD~g~~~ 150 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWT-DSET--NRIEVSNLDGSLRKVLFWQELD---------QPR--AIALDPSSGFMYWTDWGEVP 150 (619)
T ss_dssp CEEEEEEETTTTEEEEE-ETTT--TEEEEEETTSCSCEEEECSSCS---------CCC--CEEEETTTTEEEEEECSSSC
T ss_pred CcCeEEEEecCCEEEEE-eCCC--CEEEEEECCCCCEEEEEeCCCC---------CCc--eEEEecCCCeEEEeccCCCC
Confidence 44567777766655444 3332 3599999998877666531100 011 112233 3566666653346
Q ss_pred EEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc--eEEE
Q 008274 189 HLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG--KHVA 265 (571)
Q Consensus 189 ~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g--~~~~ 265 (571)
.|++.+.+|...+.|..... ....+ .++++++.||++-... ..|+++++ +|. ..+.+..... -...
T Consensus 151 ~I~r~~~dG~~~~~l~~~~~~~P~Gl-ald~~~~~LY~aD~~~----~~I~~~~~--dG~----~~~~~~~~~~~~P~gi 219 (619)
T 3s94_A 151 KIERAGMDGSSRFIIINSEIYWPNGL-TLDYEEQKLYWADAKL----NFIHKSNL--DGT----NRQAVVKGSLPHPFAL 219 (619)
T ss_dssp EEEEEETTSCSCEEEECSSCSSEEEE-EEETTTTEEEEEETTT----CCEEEESS--SCC----EEC---------CCCE
T ss_pred EEEEEECCCCceEEEEeCCCCCCcEE-EEEccCCEEEEEeCCC----CeEEEecC--CCC----ccEEEEeCCCCCceEE
Confidence 89999999877666643322 12334 4888899999985443 46888888 554 2222222111 1122
Q ss_pred EECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 266 VLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 266 ~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
++..+ .+.+ ... .-..+.+++..+++..+.+.
T Consensus 220 ~~~~~--~ly~-td~--~~~~V~~~d~~tg~~~~~i~ 251 (619)
T 3s94_A 220 TLFED--ILYW-TDW--STHSILACNKYTGEGLREIH 251 (619)
T ss_dssp EESSS--EEEE-ECT--TTCSEEEEESSSCCCCEECC
T ss_pred EEeCC--EEEE-ecC--CCCEEEEEECCCCcccEEEe
Confidence 34333 4433 222 23468888876666555443
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.083 Score=52.79 Aligned_cols=95 Identities=4% Similarity=-0.007 Sum_probs=56.4
Q ss_pred eeecccceeeee--ccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEE
Q 008274 9 QTHGLAEYIAQE--EMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 86 (571)
Q Consensus 9 ~~~g~~~~~~~~--~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 86 (571)
+.+|..-..++. .......+.|||||++|+-...+ + .|.+||
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-g-----------------------------------~i~iwd 242 (437)
T 3gre_A 199 IRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-G-----------------------------------IIDIWD 242 (437)
T ss_dssp TTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-S-----------------------------------CEEEEE
T ss_pred CCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-C-----------------------------------eEEEEE
Confidence 334444444443 22445678888888887654322 1 368899
Q ss_pred CCCCceEEE-eccCCCCCCCCCCceeEEEEEc----cCCeEEEEEEeccCccEEEEEEECCCCceEEEEE
Q 008274 87 AAGGPVSWM-DLQCGGTDQNYDEEYLARVNWM----HGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 87 l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ws----pDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~ 151 (571)
+.+++.... .. .....+..+.|+ ||++.++..... ..|.+.|+.+++......
T Consensus 243 ~~~~~~~~~~~~--------~~~~~v~~~~~~~~~s~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 243 IRFNVLIRSWSF--------GDHAPITHVEVCQFYGKNSVIVVGGSSK----TFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp TTTTEEEEEEBC--------TTCEEEEEEEECTTTCTTEEEEEEESTT----EEEEEEETTTTEEEEEEE
T ss_pred cCCccEEEEEec--------CCCCceEEEEeccccCCCccEEEEEcCC----CcEEEEEcCCCcEEEEEE
Confidence 998765432 21 234467778555 566665554322 258999999988655444
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.12 Score=48.10 Aligned_cols=133 Identities=14% Similarity=0.072 Sum_probs=67.2
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+++|.++.....+... ........++++|||++++ . +.. ...|+++|.++...+.+.. ....
T Consensus 143 ~i~~~~~~g~~~~~~~~~-------~~~~~p~~i~~~~~g~l~v-~-~~~--~~~i~~~~~~g~~~~~~~~--~g~~--- 206 (286)
T 1q7f_A 143 RVIIFDQNGNVLHKFGCS-------KHLEFPNGVVVNDKQEIFI-S-DNR--AHCVKVFNYEGQYLRQIGG--EGIT--- 206 (286)
T ss_dssp EEEEECTTSCEEEEEECT-------TTCSSEEEEEECSSSEEEE-E-EGG--GTEEEEEETTCCEEEEESC--TTTS---
T ss_pred EEEEEcCCCCEEEEeCCC-------CccCCcEEEEECCCCCEEE-E-ECC--CCEEEEEcCCCCEEEEEcc--CCcc---
Confidence 466666554433333211 1223466789999998433 2 222 1248889986543332211 1000
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecC-e-EEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGD-W-MVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~-~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
..| .....++++-+++++......|.+++.++...+.+..+. . ....+ .++++|+ ||++. .++ ...+|
T Consensus 207 ---~~p--~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i-~~~~~g~-l~vs~-~~~--~v~v~ 276 (286)
T 1q7f_A 207 ---NYP--IGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDV-ALMDDGS-VVLAS-KDY--RLYIY 276 (286)
T ss_dssp ---CSE--EEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEE-EEETTTE-EEEEE-TTT--EEEEE
T ss_pred ---CCC--cEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeE-EECCCCc-EEEEC-CCC--eEEEE
Confidence 001 011234556455555433237889998776666665432 1 13344 4888885 77764 333 35555
Q ss_pred E
Q 008274 239 C 239 (571)
Q Consensus 239 ~ 239 (571)
+
T Consensus 277 ~ 277 (286)
T 1q7f_A 277 R 277 (286)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.19 Score=50.23 Aligned_cols=134 Identities=9% Similarity=0.054 Sum_probs=77.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC-ccEEEEEEECCCCce--EEEEEeecCCe
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ-TKLKVLKFDIKTGQR--KVILVEELDSW 157 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~-~~~~i~~~d~~~g~~--~~l~~~~~~~w 157 (571)
.|.++|+++++.+.+.. .......++|++||+.|++...... ....++.++.+++-. +.+......
T Consensus 160 ~I~~id~~~~~v~~~~~---------~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p-- 228 (430)
T 3tc9_A 160 PTRLIDFEKEYVSTVYS---------GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNC-- 228 (430)
T ss_dssp EEEEEETTTTEEEEEEC---------CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSC--
T ss_pred cEEEEECCCCEEEEEec---------CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCc--
Confidence 57888999887765532 2345667899999985555543222 233567777665432 223211111
Q ss_pred eeccCCcccCCCCCccCC-CeEEEEEecCCccEEEEEeCCCceeecee-ecCe-EEEEEEEEeecCcEEEEEEcCCCCce
Q 008274 158 VNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCLGPIT-EGDW-MVEQIVGVNEASGQVYFTGTLDGPLE 234 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~~l~~~~~~~~~~~~lT-~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~ 234 (571)
.....++ ++.+++++. +...|++++.+++....+. .+.. ....+ .++++|++||++-...
T Consensus 229 -----------~giavdp~~g~lyv~d~-~~~~V~~~~~~~~~~~~~~~~~~~~~P~gi-a~~pdG~~lyv~d~~~---- 291 (430)
T 3tc9_A 229 -----------NGAETHPINGELYFNSW-NAGQVFRYDFTTQETTPLFTIQDSGWEFHI-QFHPSGNYAYIVVVNQ---- 291 (430)
T ss_dssp -----------CCEEECTTTCCEEEEET-TTTEEEEEETTTTEEEEEEECSSSSCCEEE-EECTTSSEEEEEETTT----
T ss_pred -----------eEEEEeCCCCEEEEEEC-CCCEEEEEECCCCcEEEEEEcCCCCcceeE-EEcCCCCEEEEEECCC----
Confidence 0112344 565555555 3357999999887653332 2211 11233 4999999999886544
Q ss_pred eEEEEEEe
Q 008274 235 SHLYCAKL 242 (571)
Q Consensus 235 ~~l~~~~l 242 (571)
..|++++.
T Consensus 292 ~~I~~~~~ 299 (430)
T 3tc9_A 292 HYILRSDY 299 (430)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEeC
Confidence 46777776
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.22 E-value=1 Score=49.70 Aligned_cols=54 Identities=13% Similarity=0.006 Sum_probs=38.6
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK 147 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~ 147 (571)
.|.+||+++++.... +. ....+..+.|+|||+.++...... .|.+.|+++++..
T Consensus 80 ~v~lWd~~~~~~~~~-~~--------~~~~V~~v~~sp~g~~l~sgs~dg----~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 80 TVYVLSLYSQKVLTT-VF--------VPGKITSIDTDASLDWMLIGLQNG----SMIVYDIDRDQLS 133 (902)
T ss_dssp EEEEEETTTCSEEEE-EE--------CSSCEEEEECCTTCSEEEEEETTS----CEEEEETTTTEEE
T ss_pred eEEEEECCCCcEEEE-Ec--------CCCCEEEEEECCCCCEEEEEcCCC----cEEEEECCCCccc
Confidence 578899998775422 11 234678899999999877765443 3888899988753
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=96.19 E-value=0.068 Score=49.65 Aligned_cols=39 Identities=15% Similarity=0.124 Sum_probs=27.5
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF 454 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~ 454 (571)
.+++.+.++.+.++. ...++.+.|||+||.+|..++...
T Consensus 119 ~~~~~~~l~~~~~~~--p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 119 QNELVATVLDQFKQY--PSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHHC--CCceEEEEeeCHHHHHHHHHHHHH
Confidence 345556666655442 235799999999999998887654
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.11 Score=50.30 Aligned_cols=42 Identities=12% Similarity=0.035 Sum_probs=30.0
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEE
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVIL 150 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~ 150 (571)
.....+..++|+|||++++..+... . .|.+.|+.+|+.....
T Consensus 193 ~h~~~v~~~~~s~~g~~l~s~s~d~-~--~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 193 AHTNPIKMVRLNRKSDMVATCSQDG-T--IIRVFKTEDGVLVREF 234 (355)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTC-S--EEEEEETTTCCEEEEE
T ss_pred ccCCceEEEEECCCCCEEEEEeCCC-C--EEEEEECCCCcEEEEE
Confidence 3456788999999999887765433 1 2777799998865433
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.63 Score=42.02 Aligned_cols=173 Identities=12% Similarity=0.078 Sum_probs=89.1
Q ss_pred EEEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCee
Q 008274 80 VRLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
+.|.++|+++|+...- .+. ....- ..-.++++.++.+.-+. ..++++|.++.+...-..-...+|.
T Consensus 43 S~v~~vD~~tgkv~~~~~l~--------~~~fg--eGi~~~~~~ly~ltw~~---~~v~v~D~~tl~~~~ti~~~~~Gwg 109 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVP--------PPYFG--AGIVAWRDRLIQLTWRN---HEGFVYDLATLTPRARFRYPGEGWA 109 (243)
T ss_dssp CEEEEEETTTCCEEEEEECC--------TTCCE--EEEEEETTEEEEEESSS---SEEEEEETTTTEEEEEEECSSCCCE
T ss_pred ceEEEEECCCCCEEEEEeCC--------CCcce--eEEEEeCCEEEEEEeeC---CEEEEEECCcCcEEEEEeCCCCceE
Confidence 4789999999987543 321 11111 22344566666554333 2599999999875432222222332
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCcee-ecee--ecCeEEEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPIT--EGDWMVEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~-~~lT--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
+.++ ++.+++|+ |-..|+.+|+.+.+. +.++ .....+..+......++.||...... .
T Consensus 110 ------------lt~d-g~~L~vSd--gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s----~ 170 (243)
T 3mbr_X 110 ------------LTSD-DSHLYMSD--GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLT----S 170 (243)
T ss_dssp ------------EEEC-SSCEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTT----T
T ss_pred ------------EeeC-CCEEEEEC--CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCC----C
Confidence 1222 23566776 466899999877543 3333 23222221111122344577444322 3
Q ss_pred EEEEEEeCCCCCCCCCCCeEec--------------CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLT--------------NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt--------------~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.|.++|.. .|. ....+. .....+..+++|+++.+..+-... |.+|.+.+
T Consensus 171 ~I~vIDp~-tG~----V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w---p~~~~v~~ 233 (243)
T 3mbr_X 171 RIARIDPA-SGK----VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW---PMLYEIRL 233 (243)
T ss_dssp EEEEECTT-TCB----EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC---SEEEEEEE
T ss_pred eEEEEECC-CCC----EEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC---CcEEEEEE
Confidence 67777762 221 111111 112235568889888765544333 57777665
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.24 Score=50.00 Aligned_cols=137 Identities=10% Similarity=0.066 Sum_probs=76.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEE-------ccCCeEEEEEEeccC---ccEEEEEEECCC-Cce---
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNW-------MHGNILTAQVLNRSQ---TKLKVLKFDIKT-GQR--- 146 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~w-------spDg~~i~~~~~r~~---~~~~i~~~d~~~-g~~--- 146 (571)
.|+++|++++.++.+... + ...-.....+.| ++||+.+++.....+ ....|+.++.+. |+.
T Consensus 163 ~i~~ID~~~~~v~~l~~~-~----~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~ 237 (496)
T 3kya_A 163 AIQLIDLKNRMLSSPLNI-N----TIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDR 237 (496)
T ss_dssp EEEEEETTTTEEEEEECC-T----TSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTT
T ss_pred eEEEEECCCCEEEEEEcc-C----ccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeec
Confidence 578899999888766321 0 011224667899 999986655544332 244688887655 433
Q ss_pred ---EEEEEeecCCeeeccCCcccCCCCCccCC-CeEEEEEecCCccEEEEEeCC-------Ccee------------ec-
Q 008274 147 ---KVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDIN-------GTCL------------GP- 202 (571)
Q Consensus 147 ---~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~~l~~~~~~-------~~~~------------~~- 202 (571)
+.+..-.. +. ....++ ++.+|+++.. -..||+++++ ++.. ++
T Consensus 238 ~~~~~v~~~~~-----------p~--giavdp~~g~LYvtd~~-~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l 303 (496)
T 3kya_A 238 SDIQLIAAYKQ-----------CN--GATIHPINGELYFNSYE-KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQL 303 (496)
T ss_dssp SCEEEEEEESC-----------CC--CEEECTTTCCEEEEETT-TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEE
T ss_pred ccceeeccCCC-----------ce--EEEEcCCCCeEEEEECC-CCEEEEEecccccccccCceeeccccccccccccee
Confidence 23321110 10 011234 4555555542 2369999986 4443 12
Q ss_pred eeec--CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 203 ITEG--DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 203 lT~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
++.+ .+. ..+ .++|+|+.||++-... ..|++++.
T Consensus 304 ~~~~~~~~p-~~i-a~~p~G~~lYvaD~~~----h~I~kid~ 339 (496)
T 3kya_A 304 FTIADPSWE-FQI-FIHPTGKYAYFGVINN----HYFMRSDY 339 (496)
T ss_dssp EECSSSSCC-EEE-EECTTSSEEEEEETTT----TEEEEEEE
T ss_pred EecCCCCCc-eEE-EEcCCCCEEEEEeCCC----CEEEEEec
Confidence 2222 211 223 5999999888886543 56888776
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0081 Score=64.42 Aligned_cols=158 Identities=13% Similarity=0.055 Sum_probs=81.2
Q ss_pred EEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCC-CeEEEEEecCCccEEEE
Q 008274 114 VNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYL 192 (571)
Q Consensus 114 ~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~~l~~ 192 (571)
+++.+.+..|+ +++... ..|++++++++..+.+...... .|. ....++ ++.+|+++......|++
T Consensus 458 lavD~~~g~LY-~tD~~~--~~I~v~d~dg~~~~~l~~~~~~---------~P~--giavDp~~g~ly~td~~~~~~I~~ 523 (699)
T 1n7d_A 458 LAVDWIHSNIY-WTDSVL--GTVSVADTKGVKRKTLFREQGS---------KPR--AIVVDPVHGFMYWTDWGTPAKIKK 523 (699)
T ss_dssp EECCCSSSBCE-ECCTTT--SCEEEEBSSSCCEEEECCCSSC---------CCC--CEECCSSSSCCEECCCSSSCCEEB
T ss_pred EEEEeeCCcEE-EEeccC--CeEEEEecCCCceEEEEeCCCC---------Ccc--eEEEccCCCcEEEcccCCCCeEEE
Confidence 45554443333 333332 2489999988766655321100 111 112233 34555555433367999
Q ss_pred EeCCCceeeceeecCeE-EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC-Cc---eEEEEE
Q 008274 193 HDINGTCLGPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG-KG---KHVAVL 267 (571)
Q Consensus 193 ~~~~~~~~~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~-~g---~~~~~~ 267 (571)
+++++...+.|...... ...+ .|+++++.||++-... ..|+++++ +|. ..+.+... .. -..+++
T Consensus 524 ~~~dG~~~~~l~~~~l~~PnGl-avd~~~~~LY~aD~~~----~~I~~~d~--dG~----~~~~~~~~~~~~~~P~glav 592 (699)
T 1n7d_A 524 GGLNGVDIYSLVTENIQWPNGI-TLDLLSGRLYWVDSKL----HSISSIDV--NGG----NRKTILEDEKRLAHPFSLAV 592 (699)
T ss_dssp CCSSSCCCCEESCSSCSSCCCE-EECTTTCCEEEEETTT----TEEEEECS--SSS----CCEEECCCSSSCSSCCCCEE
T ss_pred EeCCCCCeeEEEeCCCCCccEE-EEeccCCEEEEEecCC----CeEEEEcc--CCC----ceEEEEecCCcCCCceEeEE
Confidence 98887655544322221 1233 4899999999986543 56888888 553 23333221 11 112233
Q ss_pred CCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 268 DHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 268 s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
++..++++- . .-..|++++..+++.++.|
T Consensus 593 --d~~~lywtd-~--~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 593 --FEDKVFWTD-I--INEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp --ETTEEEEEC-S--TTTCEEEEETTTEEEEECC
T ss_pred --ECCEEEEEe-C--CCCeEEEEEccCCCceEEe
Confidence 334454433 2 2347888876666655444
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=95.93 E-value=0.093 Score=48.68 Aligned_cols=53 Identities=15% Similarity=0.179 Sum_probs=35.8
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC--------CCeeEEEEEcCccC
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF--------PDVFQCAVSGAPVT 468 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--------~~~~~~~v~~~~~~ 468 (571)
.+++.+.++.+.++. ...++.+.|||+||.+|..++... +..+.+....+|-.
T Consensus 120 ~~~~~~~l~~~~~~~--~~~~i~vtGHSLGGalA~l~a~~~~~~~~~~~~~~v~~~tFg~Prv 180 (269)
T 1lgy_A 120 VNDYFPVVQEQLTAH--PTYKVIVTGHSLGGAQALLAGMDLYQREPRLSPKNLSIFTVGGPRV 180 (269)
T ss_dssp HHHHHHHHHHHHHHC--TTCEEEEEEETHHHHHHHHHHHHHHHHCTTCSTTTEEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHC--CCCeEEEeccChHHHHHHHHHHHHHhhccccCCCCeEEEEecCCCc
Confidence 356667777766543 245899999999999998887654 22355555555544
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.44 Score=47.63 Aligned_cols=134 Identities=12% Similarity=-0.018 Sum_probs=74.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc-CccEEEEEEECCCCce--EEEEEeecCCe
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS-QTKLKVLKFDIKTGQR--KVILVEELDSW 157 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~-~~~~~i~~~d~~~g~~--~~l~~~~~~~w 157 (571)
.|+.+|+++++.+.+. ........+++++||+ |+++.... .....++.++..++.. ..+...
T Consensus 163 ~I~~id~~~g~v~~~~---------~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~----- 227 (433)
T 4hw6_A 163 AFRHVDFVNQYVDIKT---------TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNA----- 227 (433)
T ss_dssp CEEEEETTTTEEEEEC---------CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEEC-----
T ss_pred CEEEEECCCCEEEEee---------cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccccc-----
Confidence 4688899888776652 2334566789999999 44333211 1233467776655432 122110
Q ss_pred eeccCCcccCCCCCccCC-CeEEEEEecCCccEEEEEeCCCcee-ece-eecCeEEEEEEEEeecCcEEEEEEcCCCCce
Q 008274 158 VNLHDCFTPLDKGVTKYS-GGFIWASEKTGFRHLYLHDINGTCL-GPI-TEGDWMVEQIVGVNEASGQVYFTGTLDGPLE 234 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~-d~~~~~s~~~g~~~l~~~~~~~~~~-~~l-T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 234 (571)
-.|. ....++ ++.+|+++. +...|++++.+++.. +.+ +.+.........++++|+.||++-...
T Consensus 228 ------~~P~--giavd~~~G~lyv~d~-~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~---- 294 (433)
T 4hw6_A 228 ------RGAK--TCAVHPQNGKIYYTRY-HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK---- 294 (433)
T ss_dssp ------SSBC--CCEECTTTCCEEECBT-TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT----
T ss_pred ------CCCC--EEEEeCCCCeEEEEEC-CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC----
Confidence 0111 112344 555555554 234799999886554 333 222111111245999999999986544
Q ss_pred eEEEEEEe
Q 008274 235 SHLYCAKL 242 (571)
Q Consensus 235 ~~l~~~~l 242 (571)
..|++++.
T Consensus 295 ~~I~~~~~ 302 (433)
T 4hw6_A 295 HCIYRVDY 302 (433)
T ss_dssp TEEEEEEB
T ss_pred CEEEEEeC
Confidence 46888887
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.11 Score=53.58 Aligned_cols=142 Identities=6% Similarity=-0.007 Sum_probs=69.8
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce-E-EEEEeecCCeeeccCCcccCCCCCccCCC--eEEEEE
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR-K-VILVEELDSWVNLHDCFTPLDKGVTKYSG--GFIWAS 182 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~-~-~l~~~~~~~w~~~~~~~~~~~~~~~~~~d--~~~~~s 182 (571)
....+..++|+|++ .|+...... .|.+.|+.+++. . .+..+.. .+.. ... .++++ .++...
T Consensus 265 h~~~v~sv~~s~~~-~lasgs~Dg----tV~lWD~~~~~~~~~~~~~H~~--~V~s---v~~-----~~s~~g~~~laS~ 329 (524)
T 2j04_B 265 ADSLITTFDFLSPT-TVVCGFKNG----FVAEFDLTDPEVPSFYDQVHDS--YILS---VST-----AYSDFEDTVVSTV 329 (524)
T ss_dssp TTTCEEEEEESSSS-EEEEEETTS----EEEEEETTBCSSCSEEEECSSS--CEEE---EEE-----ECCTTSCCEEEEE
T ss_pred CCCCEEEEEecCCC-eEEEEeCCC----EEEEEECCCCCCceEEeecccc--cEEE---EEE-----EcCCCCCeEEEEe
Confidence 45678889999986 444443322 488889987643 2 2221111 1111 000 12343 355555
Q ss_pred ecCCccEEEEEeCCCcee-eceeecC--eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec-C
Q 008274 183 EKTGFRHLYLHDINGTCL-GPITEGD--WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-N 258 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~-~~lT~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt-~ 258 (571)
..+|. |.+.|+.+++. ..+.... ..+..+ .|+|+++.++. +..++ .+...++. .+. ....+. .
T Consensus 330 S~D~t--vklWD~~~~~~~~~~~~~~~~~~v~~v-~fsp~~~~l~s-~~~d~----tv~lwd~~-~~~----~~~~l~gH 396 (524)
T 2j04_B 330 AVDGY--FYIFNPKDIATTKTTVSRFRGSNLVPV-VYCPQIYSYIY-SDGAS----SLRAVPSR-AAF----AVHPLVSR 396 (524)
T ss_dssp ETTSE--EEEECGGGHHHHCEEEEECSCCSCCCE-EEETTTTEEEE-ECSSS----EEEEEETT-CTT----CCEEEEEC
T ss_pred ccCCe--EEEEECCCCCcccccccccccCcccce-EeCCCcCeEEE-eCCCC----cEEEEECc-ccc----cceeeecC
Confidence 55664 55556544332 1222111 012233 59999987544 33332 24444552 221 223333 2
Q ss_pred CCceEEEEECCCCCEEEE
Q 008274 259 GKGKHVAVLDHNMRNFVD 276 (571)
Q Consensus 259 ~~g~~~~~~s~~g~~~v~ 276 (571)
......+.|||+|+.++-
T Consensus 397 ~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 397 ETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp SSCEEEEECCSSCCBCEE
T ss_pred CCceEEEEeCCCCCeEEE
Confidence 334567799999986643
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=95.44 E-value=0.041 Score=58.96 Aligned_cols=184 Identities=10% Similarity=0.024 Sum_probs=94.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC----CceEEEEEeecCC
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT----GQRKVILVEELDS 156 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~----g~~~~l~~~~~~~ 156 (571)
.|+++++++++...+. ........+.|.+++..|+++ +...+ .|+++++++ .....+... .
T Consensus 387 ~I~~id~~~~~~~~~~---------~~~~~p~gla~d~~~~~Ly~s-D~~~~--~I~~~~~~g~~~~~~~~~~i~~---~ 451 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLI---------PNLRNVVALDTEVASNRIYWS-DLSQR--MICSTQLDRAHGVSSYDTVISR---D 451 (699)
T ss_dssp C-CEECTTSCCEECCS---------CCCTTCCCCEEETTTTEEEEC-CTTTT--SBEEEESCCCCC-CCCCCBCCS---C
T ss_pred ceEEEeCCCCcceeee---------ccCcceEEEccccccCeEEEE-ecCCC--eEEEEecCCCCCCcceEEEEeC---C
Confidence 4667777776554331 122234457899876554443 33322 388888886 221111100 0
Q ss_pred eeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 157 WVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
...|......|..+.+|+ ++. +...|+++++++...+.|..... ....+ .++|+++.||++.... ..
T Consensus 452 ------~~~P~glavD~~~g~LY~-tD~-~~~~I~v~d~dg~~~~~l~~~~~~~P~gi-avDp~~g~ly~td~~~---~~ 519 (699)
T 1n7d_A 452 ------IQAPDGLAVDWIHSNIYW-TDS-VLGTVSVADTKGVKRKTLFREQGSKPRAI-VVDPVHGFMYWTDWGT---PA 519 (699)
T ss_dssp ------C--CCCEECCCSSSBCEE-CCT-TTSCEEEEBSSSCCEEEECCCSSCCCCCE-ECCSSSSCCEECCCSS---SC
T ss_pred ------CCCcceEEEEeeCCcEEE-Eec-cCCeEEEEecCCCceEEEEeCCCCCcceE-EEccCCCcEEEcccCC---CC
Confidence 001111111222333554 343 34568899988876555543221 22334 3888888898875322 25
Q ss_pred EEEEEEeCCCCCCCCCCCeEecC--CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLTN--GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt~--~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.|+++++ +|. ..+.+.. ...-...+++++++.|.++-+ ....|+++++. +...+.+
T Consensus 520 ~I~~~~~--dG~----~~~~l~~~~l~~PnGlavd~~~~~LY~aD~---~~~~I~~~d~d-G~~~~~~ 577 (699)
T 1n7d_A 520 KIKKGGL--NGV----DIYSLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVN-GGNRKTI 577 (699)
T ss_dssp CEEBCCS--SSC----CCCEESCSSCSSCCCEEECTTTCCEEEEET---TTTEEEEECSS-SSCCEEE
T ss_pred eEEEEeC--CCC----CeeEEEeCCCCCccEEEEeccCCEEEEEec---CCCeEEEEccC-CCceEEE
Confidence 7888887 554 2222321 112234688988776655432 24589998874 4433444
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=95.42 E-value=0.35 Score=47.60 Aligned_cols=112 Identities=9% Similarity=0.069 Sum_probs=49.5
Q ss_pred ceeEEEEEc-cCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecC----Ceeecc---CCcccCCCCC-ccCCCeE
Q 008274 109 EYLARVNWM-HGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELD----SWVNLH---DCFTPLDKGV-TKYSGGF 178 (571)
Q Consensus 109 ~~~~~~~ws-pDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~----~w~~~~---~~~~~~~~~~-~~~~d~~ 178 (571)
..+..+.|+ |||+.++...... .+.+.|+.+++... +...... .+.... .......... ....++.
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~----~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSG----AWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDY 330 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTS----EEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTE
T ss_pred ccceeeeeecCCCCEEEEEeCCC----CEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCE
Confidence 345567775 8999777654332 36677887765432 2111111 010000 0000000000 1123344
Q ss_pred EEEE-ecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEE
Q 008274 179 IWAS-EKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 179 ~~~s-~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~ 227 (571)
+..+ ..+| .|++++...++. ..+......+.++. |+|||++|...+
T Consensus 331 ~~~sgs~Dg--~V~lwd~~~~~~~~~~~~~~~~V~sva-fspdG~~LA~as 378 (393)
T 4gq1_A 331 FATAHSQHG--LIQLINTYEKDSNSIPIQLGMPIVDFC-WHQDGSHLAIAT 378 (393)
T ss_dssp EEEEETTTT--EEEEEETTCTTCCEEEEECSSCEEEEE-ECTTSSEEEEEE
T ss_pred EEEEECCCC--EEEEEECCCCcEEEEecCCCCcEEEEE-EcCCCCEEEEEe
Confidence 4333 3344 466777665543 33344444566664 999999988765
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.35 E-value=0.95 Score=43.71 Aligned_cols=113 Identities=9% Similarity=0.020 Sum_probs=57.0
Q ss_pred CceeEEEEEccC---Ce-EEEEEEecc-CccEEEEEEECCCCc---eEEEEEe-e--cCCeeeccCCcccCCCCCccCCC
Q 008274 108 EEYLARVNWMHG---NI-LTAQVLNRS-QTKLKVLKFDIKTGQ---RKVILVE-E--LDSWVNLHDCFTPLDKGVTKYSG 176 (571)
Q Consensus 108 ~~~~~~~~wspD---g~-~i~~~~~r~-~~~~~i~~~d~~~g~---~~~l~~~-~--~~~w~~~~~~~~~~~~~~~~~~d 176 (571)
......++++|| +. +++...... .....|++++.+++. .+.|... . ..... ......+++|
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h--------~~~~l~~~pd 145 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLH--------SGGRIAFGPD 145 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCC--------CCCCEEECTT
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCc--------CCceEEECCC
Confidence 445677899999 44 333322211 112569999988653 2333321 1 01000 0112244567
Q ss_pred eEEEEEecC------------CccEEEEEeCCCc-------------eeeceeecCeEEEEEEEEeecCcEEEEEEcC
Q 008274 177 GFIWASEKT------------GFRHLYLHDINGT-------------CLGPITEGDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 177 ~~~~~s~~~------------g~~~l~~~~~~~~-------------~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
+.++++..+ ....|++++.++. ..+.+..+-.....+ .|+++++.||+.-..
T Consensus 146 G~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~-a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 146 GMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGL-AWHPKTGELFSSEHG 222 (352)
T ss_dssp SCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCC-EECTTTCCEEEEEEC
T ss_pred CCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccE-EEECCCCCEEEEEcC
Confidence 755555421 1247999998762 223333333333344 388855667777543
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=2.5 Score=44.34 Aligned_cols=164 Identities=15% Similarity=0.122 Sum_probs=93.0
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccE
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRH 189 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~ 189 (571)
....+.|.+.+..|+++ +... ..|++++++++..+.+....-. .|......|..+.+|+. +. +...
T Consensus 350 ~~~~ld~d~~~~~ly~s-D~~~--~~I~r~~~~g~~~~~v~~~~~~---------~p~GlAvD~~~~~lY~t-D~-~~~~ 415 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWT-DDEV--RAIRRSFIDGSGSQFVVTAQIA---------HPDGIAVDWVARNLYWT-DT-GTDR 415 (619)
T ss_dssp SEEEEEEETTTTEEEEE-ETTT--TEEEEEETTSCSCEEEECSSCS---------CCCEEEEETTTTEEEEE-ET-TTTE
T ss_pred ccEEEEEEcCCCeEEEE-eCCC--CeEEEEEcCCCccEEEEECCCC---------CcCceEEecccCcEEEE-eC-CCCc
Confidence 45567888854444443 3322 2599999998766555431100 01100012233345554 33 4567
Q ss_pred EEEEeCCCceeeceeecCeE-EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC--CceEEEE
Q 008274 190 LYLHDINGTCLGPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG--KGKHVAV 266 (571)
Q Consensus 190 l~~~~~~~~~~~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~--~g~~~~~ 266 (571)
|.+++++|...+.|...... ..++ .++|..+.||++-... ...|+++++ +|. ..+.+... ..-...+
T Consensus 416 I~v~~~~G~~~~~l~~~~l~~P~~i-avdp~~G~ly~tD~g~---~~~I~r~~~--dG~----~~~~l~~~~l~~P~Gla 485 (619)
T 3s94_A 416 IEVTRLNGTMRKILISEDLEEPRAI-VLDPMVGYMYWTDWGE---IPKIERAAL--DGS----DRVVLVNTSLGWPNGLA 485 (619)
T ss_dssp EEEEETTSCSCEEEECTTCCSEEEE-EEETTTTEEEEEECSS---SCEEEEEET--TSC----SCEEEECSSCSCEEEEE
T ss_pred EEEEeCCCCeEEEEEECCCCCeeeE-EEEcCCCcEEEecCCC---CCEEEEEcc--CCC----ccEEEEeCCCCCCeeeE
Confidence 88999888766666544333 3444 4888888999986543 267999998 665 33344322 2234557
Q ss_pred ECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 267 LDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 267 ~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
++++++.+.+.=+ ....|..+++ +|...+.+
T Consensus 486 lD~~~~~LY~aD~---~~~~I~~~~~-dG~~~~~~ 516 (619)
T 3s94_A 486 LDYDEGKIYWGDA---KTDKIEVMNT-DGTGRRVL 516 (619)
T ss_dssp EETTTTEEEEEET---TTTEEEEEES-SSCCCEEE
T ss_pred EcccCCEEEEEEC---CCCEEEEEec-CCCceEEE
Confidence 8887766655432 2347888887 45444444
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=95.21 E-value=0.6 Score=45.22 Aligned_cols=113 Identities=12% Similarity=0.004 Sum_probs=57.1
Q ss_pred CceeEEEEEccC----CeEEEEEEe-cc--CccEEEEEEECCCC--c---eEEEEEe-ecCCeeeccCCcccCCCCCccC
Q 008274 108 EEYLARVNWMHG----NILTAQVLN-RS--QTKLKVLKFDIKTG--Q---RKVILVE-ELDSWVNLHDCFTPLDKGVTKY 174 (571)
Q Consensus 108 ~~~~~~~~wspD----g~~i~~~~~-r~--~~~~~i~~~d~~~g--~---~~~l~~~-~~~~w~~~~~~~~~~~~~~~~~ 174 (571)
......++++|| |.+++..+. .. .....|++++.+++ . .+.|... ..... .......+.
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~--------h~~~~l~~~ 143 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYI--------HNGGRIRFG 143 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSS--------CCCCCEEEC
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCC--------cCCceEEEC
Confidence 345667899998 544443332 11 11257999998765 1 2333321 11100 001112345
Q ss_pred CCeEEEEEecC------------CccEEEEEeCCCc--------eeeceeecCeEEEEEEEEeecCcEEEEEEcC
Q 008274 175 SGGFIWASEKT------------GFRHLYLHDINGT--------CLGPITEGDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 175 ~d~~~~~s~~~------------g~~~l~~~~~~~~--------~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
+|+.++++..+ ....|++++.++. ..+.+..+-.....+ .|+++...||+.-..
T Consensus 144 pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gl-a~d~~~g~l~v~d~g 217 (354)
T 3a9g_A 144 PDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGI-DWHRASGVMVATEHG 217 (354)
T ss_dssp TTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEE-EECTTTCCEEEEECC
T ss_pred CCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceE-EEeCCCCCEEEEecC
Confidence 67645544321 1247999998765 223344333223344 388855567777654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=95.17 E-value=0.6 Score=44.53 Aligned_cols=169 Identities=12% Similarity=0.124 Sum_probs=86.8
Q ss_pred ceeEEEEEccCCeEEEEEEeccC--------------------ccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCC
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQ--------------------TKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLD 168 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~--------------------~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~ 168 (571)
.....++++|||++++....... ....|+++|.++|+...... .... -.|.
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--~~~~------~~p~- 94 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG--KNLF------YLPH- 94 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC--TTTC------SSEE-
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC--CCcc------CCce-
Confidence 45677899999986644322210 01259999999988643221 1100 0010
Q ss_pred CCCccCCCeEEEEEecCCccEEEEEeCCCc--eeecee--------ecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 169 KGVTKYSGGFIWASEKTGFRHLYLHDINGT--CLGPIT--------EGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 169 ~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~--~~~~lT--------~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
....++++-+++++. +...|++++.++. ....+. .+.+ ....+ .++++++.||++.... ...|
T Consensus 95 -gia~d~~g~l~v~d~-~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i-a~~~~~g~lyv~d~~~---~~~I 168 (329)
T 3fvz_A 95 -GLSIDTDGNYWVTDV-ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV-AVEPSTGAVFVSDGYC---NSRI 168 (329)
T ss_dssp -EEEECTTSCEEEEET-TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE-EECTTTCCEEEEECSS---CCEE
T ss_pred -EEEECCCCCEEEEEC-CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE-EEeCCCCeEEEEeCCC---CCeE
Confidence 112344553444443 2356899998776 233332 1111 12334 4888566677776421 2456
Q ss_pred EEEEeCCCCCCCCCCCeEecC-C----------CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 238 YCAKLYPDWNHTLEAPVKLTN-G----------KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~-~----------~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
++++. +|. ....+.. + ..-....+++++..+++. ... -..+.+++..+++.++.+
T Consensus 169 ~~~~~--~g~----~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~-d~~--~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 169 VQFSP--SGK----FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA-DRE--NGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp EEECT--TSC----EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE-ETT--TTEEEEEETTTCCEEEEE
T ss_pred EEEcC--CCC----EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE-ECC--CCEEEEEECCCCcEEEEE
Confidence 66664 443 2222210 1 113456888884444333 332 247888888667765554
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.16 E-value=1.2 Score=40.74 Aligned_cols=168 Identities=14% Similarity=0.114 Sum_probs=87.5
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
|.++|+++|+...-.+. ...+-. .-.++|+.++.+.-+. ..++.+|.++++...-..-...+|
T Consensus 77 v~~iD~~Tgkv~~~~l~--------~~~Fge--Git~~g~~Ly~ltw~~---~~v~V~D~~Tl~~~~ti~~~~eGw---- 139 (268)
T 3nok_A 77 LRQLSLESAQPVWMERL--------GNIFAE--GLASDGERLYQLTWTE---GLLFTWSGMPPQRERTTRYSGEGW---- 139 (268)
T ss_dssp EEECCSSCSSCSEEEEC--------TTCCEE--EEEECSSCEEEEESSS---CEEEEEETTTTEEEEEEECSSCCC----
T ss_pred EEEEECCCCcEEeEECC--------CCccee--EEEEeCCEEEEEEccC---CEEEEEECCcCcEEEEEeCCCcee----
Confidence 78888888876543231 111112 2345666665554333 359999999987543222112223
Q ss_pred CCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCcee-ece--eecCeEE---EEEEEEeecCcEEEEEEcCCCCcee
Q 008274 162 DCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPI--TEGDWMV---EQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 162 ~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~-~~l--T~~~~~~---~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
+..++. +.+++|+ |-..|+.+|+.+.+. ..+ +.....+ .+.. |. +| .||...... .
T Consensus 140 --------GLt~Dg-~~L~vSd--Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe-~~-dG-~lyanvw~s----~ 201 (268)
T 3nok_A 140 --------GLCYWN-GKLVRSD--GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELE-CA-NG-VIYANIWHS----S 201 (268)
T ss_dssp --------CEEEET-TEEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE-EE-TT-EEEEEETTC----S
T ss_pred --------EEecCC-CEEEEEC--CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccE-Ee-CC-EEEEEECCC----C
Confidence 112222 3666776 567899999877543 333 3333222 2232 44 55 677554332 4
Q ss_pred EEEEEEeCCCCCCCCCCCeEec--------------CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 236 HLYCAKLYPDWNHTLEAPVKLT--------------NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~lt--------------~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.|.++|.. .|. ....+. ....-+..+++|+++.+..+-... |.+|.+.+
T Consensus 202 ~I~vIDp~-TG~----V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~W---p~~~ev~~ 264 (268)
T 3nok_A 202 DVLEIDPA-TGT----VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLW---PRLFEVRL 264 (268)
T ss_dssp EEEEECTT-TCB----EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTC---SEEEEEEE
T ss_pred eEEEEeCC-CCc----EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCC---CceEEEEE
Confidence 78888873 221 111111 111234568888877665543332 46776554
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.78 Score=44.36 Aligned_cols=116 Identities=8% Similarity=-0.052 Sum_probs=58.7
Q ss_pred CceeEEEEEccC----CeEEEEEEeccC---ccEEEEEEECCCCc-----eEEEEEeecCCeeeccCCcccCCCCCccCC
Q 008274 108 EEYLARVNWMHG----NILTAQVLNRSQ---TKLKVLKFDIKTGQ-----RKVILVEELDSWVNLHDCFTPLDKGVTKYS 175 (571)
Q Consensus 108 ~~~~~~~~wspD----g~~i~~~~~r~~---~~~~i~~~d~~~g~-----~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~ 175 (571)
......++++|| +.+++..+.+.. ....|++++.+.+. .+.|....... ..-......+.+.+
T Consensus 65 ~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~-----~~~~h~~~~l~~~p 139 (353)
T 2g8s_A 65 QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKL-----STGNHFGGRLVFDG 139 (353)
T ss_dssp TCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCC-----BSSSCCCCCEEECS
T ss_pred CCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCC-----CCCcccCccEEECC
Confidence 345567899996 554444333221 14578888876542 22232211100 00000111224567
Q ss_pred CeEEEEEecCC------------ccEEEEEeCCCc-------------eeeceeecCeEEEEEEEEeecCcEEEEEEcC
Q 008274 176 GGFIWASEKTG------------FRHLYLHDINGT-------------CLGPITEGDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 176 d~~~~~s~~~g------------~~~l~~~~~~~~-------------~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
|+.++++..++ ...|++++.++. ..+....+-.....+. |+++...||++-..
T Consensus 140 dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~-~d~~~g~l~~~d~g 217 (353)
T 2g8s_A 140 KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMA-MNPWSNALWLNEHG 217 (353)
T ss_dssp SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEE-EETTTTEEEEEEEC
T ss_pred CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceE-EECCCCCEEEEecC
Confidence 77665554321 247999998775 2333444444444554 88866677777543
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=95.07 E-value=1.1 Score=41.23 Aligned_cols=160 Identities=14% Similarity=0.032 Sum_probs=85.3
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccE
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRH 189 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~ 189 (571)
+...+.|+|||. ++..+.. .....|..+|+++|+...-.......+.. +...+++.++..+..+ ..
T Consensus 22 f~~Gl~~~~dg~-Lyvstg~-~~~s~v~~iD~~tg~v~~~i~l~~~~fge----------Gi~~~g~~lyv~t~~~--~~ 87 (266)
T 2iwa_A 22 FTQGLVYAENDT-LFESTGL-YGRSSVRQVALQTGKVENIHKMDDSYFGE----------GLTLLNEKLYQVVWLK--NI 87 (266)
T ss_dssp CEEEEEECSTTE-EEEEECS-TTTCEEEEEETTTCCEEEEEECCTTCCEE----------EEEEETTEEEEEETTC--SE
T ss_pred CcccEEEeCCCe-EEEECCC-CCCCEEEEEECCCCCEEEEEecCCCcceE----------EEEEeCCEEEEEEecC--CE
Confidence 345678999974 3333322 23456999999999865432211110100 0122344455554433 46
Q ss_pred EEEEeCCCce-eeceeec-CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC-c-----
Q 008274 190 LYLHDINGTC-LGPITEG-DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-G----- 261 (571)
Q Consensus 190 l~~~~~~~~~-~~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~-g----- 261 (571)
++++|.++.+ ...+.-+ . . -..+++||+.+|.+ + + ...|+.++. ... . ....+.-+. +
T Consensus 88 v~viD~~t~~v~~~i~~g~~---~-g~glt~Dg~~l~vs-~--g--s~~l~viD~--~t~-~--v~~~I~Vg~~~~p~~~ 153 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMK---D-GWGLATDGKILYGS-D--G--TSILYEIDP--HTF-K--LIKKHNVKYNGHRVIR 153 (266)
T ss_dssp EEEEETTTTEEEEEEECCSS---S-CCEEEECSSSEEEE-C--S--SSEEEEECT--TTC-C--EEEEEECEETTEECCC
T ss_pred EEEEECCCCcEEEEEECCCC---C-eEEEEECCCEEEEE-C--C--CCeEEEEEC--CCC-c--EEEEEEECCCCccccc
Confidence 8889987654 3445433 1 1 12367799988865 3 2 257888887 322 0 233333211 1
Q ss_pred eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 262 KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 262 ~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.....+. +|+ + |.... ....+.++|..+++.+..+.
T Consensus 154 ~nele~~-dg~-l-yvn~~--~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 154 LNELEYI-NGE-V-WANIW--QTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp EEEEEEE-TTE-E-EEEET--TSSEEEEEETTTCCEEEEEE
T ss_pred ceeEEEE-CCE-E-EEecC--CCCeEEEEECCCCcEEEEEE
Confidence 1233444 664 3 32222 23589999998888766654
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=95.05 E-value=1.6 Score=44.91 Aligned_cols=72 Identities=14% Similarity=0.099 Sum_probs=39.4
Q ss_pred EEeecCcEEEEEEcCCCCceeEEEEEEeCCC-----CCCCCC--CCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEE
Q 008274 215 GVNEASGQVYFTGTLDGPLESHLYCAKLYPD-----WNHTLE--APVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRI 287 (571)
Q Consensus 215 ~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~-----g~~~~~--~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l 287 (571)
.+||||+++|.+.-..+ ++..+++... +..... ....+.-+.|-....|++|| + +|+....+ .++
T Consensus 283 ~~sPDGk~v~V~~~~s~----~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~-aY~t~~ld--sqV 354 (595)
T 1fwx_A 283 NMAPDKKHLCVAGKLSP----TVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-N-AYTSLFLD--SQV 354 (595)
T ss_dssp EECTTSSEEEEECTTSS----BEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-E-EEEEETTT--TEE
T ss_pred EEcCCCCEEEEeCCCCC----eEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-e-EEEEEecC--CcE
Confidence 48999999888754443 4455555210 100000 11233334455666999999 4 56555433 367
Q ss_pred EEEEcCC
Q 008274 288 LLCSLQD 294 (571)
Q Consensus 288 ~~~~~~~ 294 (571)
..++..+
T Consensus 355 ~kwdi~~ 361 (595)
T 1fwx_A 355 VKWNIED 361 (595)
T ss_dssp EEEEHHH
T ss_pred EEEEhhH
Confidence 7777644
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=94.84 E-value=2.4 Score=40.55 Aligned_cols=145 Identities=9% Similarity=0.014 Sum_probs=70.0
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccC----CeEEEEEEeccCccEEEEEEECCCC--------ceEEE
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHG----NILTAQVLNRSQTKLKVLKFDIKTG--------QRKVI 149 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspD----g~~i~~~~~r~~~~~~i~~~d~~~g--------~~~~l 149 (571)
|++++.++++...+... +............++++|| |.+++..+... ...|.++..+.+ +.+.|
T Consensus 55 I~~v~~~~g~~~~v~~~--~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~--~~~v~R~~~~~~~~~~~~~~~~~~i 130 (347)
T 3das_A 55 ITRVDAKTGRKTELGEV--PGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS--DNRIVRMLYDEKKPSGEQLGAPDTV 130 (347)
T ss_dssp EEEECTTTCCEEEEEEC--TTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS--SEEEEEEEBCTTSCTTCCBCCCEEE
T ss_pred EEEEECCCCcEeeeccc--CceeecCCCCceeeEeccccccCCEEEEEEecCC--CCEEEEEEeCCCCcccccCCCcEEE
Confidence 55566555554433210 0001223456678999996 55444433222 346888887763 23444
Q ss_pred EEe-ecCCeeeccCCcccCCCCCccCCCeEEEEEec------------CCccEEEEEeCCCc--------eeeceeecCe
Q 008274 150 LVE-ELDSWVNLHDCFTPLDKGVTKYSGGFIWASEK------------TGFRHLYLHDINGT--------CLGPITEGDW 208 (571)
Q Consensus 150 ~~~-~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~------------~g~~~l~~~~~~~~--------~~~~lT~~~~ 208 (571)
... ...... ....+.+.+|+.+|++.- .....|++++.++. ..+..+.+-.
T Consensus 131 ~~~~p~~~~H--------~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R 202 (347)
T 3das_A 131 FRGIPKGVIH--------NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHR 202 (347)
T ss_dssp EEEECCCSSC--------CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCS
T ss_pred EEcCCCCCCc--------cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCC
Confidence 432 211100 011123456664444421 12467999998875 2233343433
Q ss_pred EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE
Q 008274 209 MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 209 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 241 (571)
+...+ .|+++| .||+.-+..+. ...|.++.
T Consensus 203 Np~Gl-a~dp~G-~L~~~d~g~~~-~deln~i~ 232 (347)
T 3das_A 203 NVQGL-AWDDKQ-RLFASEFGQDT-WDELNAIK 232 (347)
T ss_dssp BCCEE-EECTTC-CEEEEECCSSS-CEEEEEEC
T ss_pred CcceE-EECCCC-CEEEEecCCCC-CceeeEEc
Confidence 33344 388875 46666543221 24455443
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=94.77 E-value=0.91 Score=42.51 Aligned_cols=162 Identities=10% Similarity=0.112 Sum_probs=82.5
Q ss_pred eeEEEEEccCCeEEEEEE---eccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC-eEEEEEecC
Q 008274 110 YLARVNWMHGNILTAQVL---NRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG-GFIWASEKT 185 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~---~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d-~~~~~s~~~ 185 (571)
....++|++||++++... ..+.....|+++|.++|+.+.+......+-. . . + .....+++ +-++++...
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~-~--~--~--~~i~~~~~~g~l~v~~~~ 91 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYG-G--I--P--AGCQCDRDANQLFVADMR 91 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEE-C--C--E--EEEEECSSSSEEEEEETT
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCC-C--C--C--ceEEEecCCCcEEEEECC
Confidence 345689999997554410 0001122599999999987765431000000 0 0 0 00123455 544444332
Q ss_pred CccEEEEEeCCCceeece-eec-----CeEEEEEEEEeecCcEEEEEEcCCC-----------CceeEEEEEEeCCCCCC
Q 008274 186 GFRHLYLHDINGTCLGPI-TEG-----DWMVEQIVGVNEASGQVYFTGTLDG-----------PLESHLYCAKLYPDWNH 248 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~l-T~~-----~~~~~~~~~~s~dg~~l~~~~~~~~-----------~~~~~l~~~~l~~~g~~ 248 (571)
..|++++.+ ++.+.+ ... ...+..+ .++++|+ ||+.....+ .....|++++. ++
T Consensus 92 --~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i-~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~g-- 162 (314)
T 1pjx_A 92 --LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDC-AFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTT--DG-- 162 (314)
T ss_dssp --TEEEEEETT-SCEEECCSBCTTSCBCBCCCEE-EECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECT--TS--
T ss_pred --CCEEEEeCC-CCEEEEEeccCCCccccCCcCE-EECCCCC-EEEEecCcccccccccccccCCCCeEEEECC--CC--
Confidence 269999988 655554 321 1123344 3788885 666654321 11257888876 43
Q ss_pred CCCCCeEecC-CCceEEEEEC----CCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 249 TLEAPVKLTN-GKGKHVAVLD----HNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 249 ~~~~~~~lt~-~~g~~~~~~s----~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
..+.+.. ........++ ++|+.+.+.... -..++++++.
T Consensus 163 ---~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~---~~~i~~~~~~ 206 (314)
T 1pjx_A 163 ---QMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP---TKKLWSYDIK 206 (314)
T ss_dssp ---CEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT---TTEEEEEEEE
T ss_pred ---CEEEeccCCCCcceEEEecccCCCCCEEEEEECC---CCeEEEEECC
Confidence 2233221 1223445778 888755443322 2478888764
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=94.74 E-value=1.5 Score=41.99 Aligned_cols=163 Identities=9% Similarity=0.049 Sum_probs=0.0
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEE----eccCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWM----DLQCGG 101 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~----~~~~~~ 101 (571)
.++..||||+.++=...-.... ..|+.++ +++.+.+ ...
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~~--------------------------------~~l~~~~--~g~~~~~p~~~~~~--- 62 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQPE--------------------------------MQVAELT--QDGLIPFPPQSGNA--- 62 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCCS--------------------------------CSEEEEE--TTEEEESCCCCSSC---
T ss_pred ceEEECCCCCEEEEeCCCCCCc--------------------------------eEEEEEC--CCCeecCCCcccCc---
Q ss_pred CCCCCCCceeEEEEEccCCeEEEEEEe-----ccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC
Q 008274 102 TDQNYDEEYLARVNWMHGNILTAQVLN-----RSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG 176 (571)
Q Consensus 102 ~~~~~~~~~~~~~~wspDg~~i~~~~~-----r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d 176 (571)
...-.....+.+++||++++.-.. ... |+++|+++|+.......... ..........-.....+
T Consensus 63 ---~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~----i~~~d~~tg~~~~~~~~~~~----~~~~~~~~~~v~vd~~~ 131 (343)
T 2qe8_A 63 ---IITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK----LVAWDTLNNQLSRVIYLPPP----ITLSNSFVNDLAVDLIH 131 (343)
T ss_dssp ---CCCCSCEEEEEECSSSEEEEEECHHHHTSCCE----EEEEETTTTEEEEEEECCTT----TSCTTCCCCEEEEETTT
T ss_pred ---ccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe----EEEEECCCCeEEEEEECChh----hcccccccceEEEecCC
Q ss_pred eEEEEEecC--CccEEEEEeCCCceeeceeec------------------------------CeEEEEEEEEeecCcEEE
Q 008274 177 GFIWASEKT--GFRHLYLHDINGTCLGPITEG------------------------------DWMVEQIVGVNEASGQVY 224 (571)
Q Consensus 177 ~~~~~s~~~--g~~~l~~~~~~~~~~~~lT~~------------------------------~~~~~~~~~~s~dg~~l~ 224 (571)
+.+++++.. +...|+++++.+++..++..+ ......+. +|+||+.||
T Consensus 132 g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia-~s~dg~~ly 210 (343)
T 2qe8_A 132 NFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV-LDAENEWLY 210 (343)
T ss_dssp TEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE-ECTTSCEEE
T ss_pred CEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE-eccCCCEEE
Q ss_pred EEEcCCCCceeEEEEEE
Q 008274 225 FTGTLDGPLESHLYCAK 241 (571)
Q Consensus 225 ~~~~~~~~~~~~l~~~~ 241 (571)
+...... .+|+++
T Consensus 211 ~~~~~~~----~l~~~~ 223 (343)
T 2qe8_A 211 LSPMHST----SMYRIK 223 (343)
T ss_dssp EEESSCS----EEEEEE
T ss_pred EEeCCCC----eEEEEE
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=94.46 E-value=3 Score=38.40 Aligned_cols=173 Identities=13% Similarity=0.083 Sum_probs=87.5
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+++|.+ ++...+... ........+.+++||++++.. ... ..|+++|.+ |+.+.+........
T Consensus 37 ~v~~~d~~-~~~~~~~~~-------~~~~~~~~i~~~~~g~l~v~~-~~~---~~i~~~~~~-g~~~~~~~~~~~~~--- 100 (299)
T 2z2n_A 37 MISCINLD-GKITEYPLP-------TPDAKVMCLTISSDGEVWFTE-NAA---NKIGRITKK-GIIKEYTLPNPDSA--- 100 (299)
T ss_dssp EEEEECTT-CCEEEEECS-------STTCCEEEEEECTTSCEEEEE-TTT---TEEEEECTT-SCEEEEECSSTTCC---
T ss_pred cEEEEcCC-CCeEEecCC-------cccCceeeEEECCCCCEEEeC-CCC---CeEEEECCC-CcEEEEeCCCcCCC---
Confidence 46777877 666555432 123456678899999844432 212 248999987 55444321101100
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceee--cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITE--GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
+. ....++++-++++... -..|++++.+ ++...+.. .......+ .++++| .+|+..... ..|+
T Consensus 101 -----~~--~i~~~~~g~l~v~~~~-~~~i~~~d~~-g~~~~~~~~~~~~~~~~i-~~~~~g-~l~v~~~~~----~~i~ 165 (299)
T 2z2n_A 101 -----PY--GITEGPNGDIWFTEMN-GNRIGRITDD-GKIREYELPNKGSYPSFI-TLGSDN-ALWFTENQN----NAIG 165 (299)
T ss_dssp -----EE--EEEECTTSCEEEEETT-TTEEEEECTT-CCEEEEECSSTTCCEEEE-EECTTS-CEEEEETTT----TEEE
T ss_pred -----ce--eeEECCCCCEEEEecC-CceEEEECCC-CCEEEecCCCCCCCCceE-EEcCCC-CEEEEeCCC----CEEE
Confidence 00 0122344534444332 2468888884 44333321 12223444 377777 466665432 3577
Q ss_pred EEEeCCCCCCCCCCCeEe--cC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 239 CAKLYPDWNHTLEAPVKL--TN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~l--t~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
+++. ++. ...+ .. ........++++|+.++ ... ....+++++. +++
T Consensus 166 ~~~~--~g~-----~~~~~~~~~~~~~~~i~~~~~g~l~v--~~~--~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 166 RITE--SGD-----ITEFKIPTPASGPVGITKGNDDALWF--VEI--IGNKIGRITT-SGE 214 (299)
T ss_dssp EECT--TCC-----EEEEECSSTTCCEEEEEECTTSSEEE--EET--TTTEEEEECT-TCC
T ss_pred EEcC--CCc-----EEEeeCCCCCCcceeEEECCCCCEEE--Ecc--CCceEEEECC-CCc
Confidence 7776 442 2232 21 12234557888887433 222 1237888887 555
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=94.43 E-value=4.5 Score=40.44 Aligned_cols=39 Identities=8% Similarity=0.106 Sum_probs=24.0
Q ss_pred cEEEEEeCCCc-----------eeeceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 188 RHLYLHDINGT-----------CLGPITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 188 ~~l~~~~~~~~-----------~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
..|++++.++. ..+..+.+-.....+. |+++| .||++-.
T Consensus 197 G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla-~dp~G-~L~~~d~ 246 (454)
T 1cru_A 197 GKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLA-FTPNG-KLLQSEQ 246 (454)
T ss_dssp SEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEE-ECTTS-CEEEEEE
T ss_pred eeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEE-ECCCC-CEEEEec
Confidence 56899988776 3344555544555554 88865 4666554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 571 | ||||
| d1xfda1 | 465 | b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-lik | 7e-41 | |
| d1xfda2 | 258 | c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-li | 2e-31 | |
| d2bgra1 | 470 | b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, | 3e-30 | |
| d2bgra2 | 258 | c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26 | 5e-26 | |
| d2gzsa1 | 265 | c.69.1.38 (A:41-305) Enterobactin and salmochelin | 9e-19 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 6e-18 | |
| d2hu7a2 | 260 | c.69.1.33 (A:322-581) Acylamino-acid-releasing enz | 7e-18 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 3e-17 | |
| d2b9va2 | 385 | c.69.1.21 (A:50-434) Alpha-amino acid ester hydrol | 1e-16 | |
| d2d81a1 | 318 | c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymer | 1e-16 | |
| d1mpxa2 | 381 | c.69.1.21 (A:24-404) Alpha-amino acid ester hydrol | 9e-16 | |
| d1qfma2 | 280 | c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-term | 6e-15 | |
| d1lnsa3 | 405 | c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopep | 7e-15 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 9e-14 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 5e-10 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 5e-10 | |
| d1wb4a1 | 273 | c.69.1.2 (A:803-1075) Feruloyl esterase domain of | 2e-09 | |
| d1sfra_ | 288 | c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculo | 7e-09 | |
| d1ju3a2 | 347 | c.69.1.21 (A:5-351) Bacterial cocaine esterase N-t | 3e-08 | |
| d3c8da2 | 246 | c.69.1.2 (A:151-396) Enterochelin esterase, cataly | 6e-07 | |
| d1jjfa_ | 255 | c.69.1.2 (A:) Feruloyl esterase domain of the cell | 2e-06 | |
| d1vkha_ | 263 | c.69.1.32 (A:) Putative serine hydrolase Ydr428c { | 6e-06 | |
| d1dina_ | 233 | c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas | 1e-05 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 7e-05 | |
| d1dqza_ | 280 | c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculo | 3e-04 | |
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 5e-04 | |
| d1r88a_ | 267 | c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tu | 0.001 |
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 465 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (383), Expect = 7e-41
Identities = 63/300 (21%), Positives = 116/300 (38%), Gaps = 12/300 (4%)
Query: 10 THGLAEYIAQEEMDR-KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDH 68
+GL++++ +EE+ + +WWS D +A+ ++ S +P + + + +
Sbjct: 159 YNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTY--TGSIYPTVKPY 216
Query: 69 AYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLN 128
YP AG+ N + L V+ G + D E Y+ V W + LN
Sbjct: 217 HYPKAGSENPSISLHVIGLNGPTHDLEMMPPD--DPRMREYYITMVKWATSTKVAVTWLN 274
Query: 129 RSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDK-GVTKYSGGFIWASEKTGF 187
R+Q + D TG +E ++W++ + K G + I + F
Sbjct: 275 RAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKF 334
Query: 188 RHLYLH----DINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLY 243
H+ + + + + IT GDW V +I+ +E ++YF T D P LY A
Sbjct: 335 YHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394
Query: 244 PDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303
++N + L A H+M F+ + P + + D + L
Sbjct: 395 GNFNRQCLSC-DLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVH-NTTDKKKMFDLET 452
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (300), Expect = 2e-31
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 14/252 (5%)
Query: 328 DGTVLYGALYKP---DESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGI 384
D L + KP ++ Y L+ V G P Q V + + V + S G
Sbjct: 11 DDYNLPMQILKPATFTDTT----HYPLLLVVDGTPGSQSVAEKF--EVSWETVMVSSHGA 64
Query: 385 LVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGG 444
+V K D RG+ +G K ++ G ++ +DQ+ ++K+ + ++G YGG
Sbjct: 65 VVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGG 124
Query: 445 YLSAITLARFPDV----FQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHH 500
YLS L + F C + +P+T + Y + ++E+Y+GL D YE + V H
Sbjct: 125 YLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHR 184
Query: 501 VH-KMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYM 559
V + + L++H DE +HF+HTA LI L+ + Y + I+PDE H + ++
Sbjct: 185 VSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHL 244
Query: 560 EERIWEFIERTL 571
I F
Sbjct: 245 YRSIINFFVECF 256
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 470 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 121 bits (304), Expect = 3e-30
Identities = 53/298 (17%), Positives = 94/298 (31%), Gaps = 17/298 (5%)
Query: 18 AQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASN 77
+E + WWS + F+A+ Q + +E+P S+ YP AGA N
Sbjct: 166 EEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVN 225
Query: 78 VKVRLGVVSAAGGPVSWMDL---QCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ--T 132
V+ VV+ + YL V W ++ Q L R Q +
Sbjct: 226 PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYS 285
Query: 133 KLKVLKFDIKTGQRKVILV-----EELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGF 187
+ + +D +G+ ++ WV P + + S + G+
Sbjct: 286 VMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPH--FTLDGNSFYKIISNEEGY 343
Query: 188 RHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDG--PLESHLYCAKLYPD 245
RH+ I+ IT+G W V I + +Y+ P +LY +L
Sbjct: 344 RHICYFQIDKKDCTFITKGTWEVIGIEALTS--DYLYYISNEYKGMPGGRNLYKIQLSDY 401
Query: 246 WNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303
T + + + + P L S + + L +
Sbjct: 402 TKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLH-SSVNDKGLRVLED 458
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 105 bits (261), Expect = 5e-26
Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 12/260 (4%)
Query: 318 PPDIVQIQANDGTVLYGALYKP---DESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDM 374
P + + T + + P D+S+ Y L+ VY GPC Q + ++
Sbjct: 2 PSKKLDFIILNETKFWYQMILPPHFDKSK----KYPLLLDVYAGPCSQKADTVF--RLNW 55
Query: 375 RAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGH 434
++ I+V D RG+ +G K +I G + EDQ+ A K G
Sbjct: 56 ATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKR 115
Query: 435 IGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEY 494
I ++GWSYGGY++++ L VF+C ++ APV+ W+ YD+ YTE+YMGLP+ + Y
Sbjct: 116 IAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHY 175
Query: 495 ---SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR 551
+ + + + + LL+HG D+NVHF+ +A++ ALV ++ + + DE H
Sbjct: 176 RNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIA 235
Query: 552 RHRDRIYMEERIWEFIERTL 571
++ + FI++
Sbjct: 236 SSTAHQHIYTHMSHFIKQCF 255
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} Length = 265 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Score = 84.3 bits (207), Expect = 9e-19
Identities = 28/267 (10%), Positives = 48/267 (17%), Gaps = 45/267 (16%)
Query: 303 EQPLTVPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPP-PYKTLISVYGGPCV 361
++ + D P+ P Y L + G +
Sbjct: 5 DKGSVFYHFSATSFDSVD-------GTRHYRVWTAVPNT--TAPASGYPILYMLDGNAVM 55
Query: 362 QLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGA 421
+ D Q ++ + + L A D +G
Sbjct: 56 DRLDDEL------LKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGR 109
Query: 422 EWLIKQGLAKV--------------------GHIGLYGWSYGGYLSAITLARFPDVFQCA 461
G GL+G SYGG + F+
Sbjct: 110 FSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLSSSY-FRSY 168
Query: 462 VSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHF 521
S +P + H +
Sbjct: 169 YSASPSLGRGYDALLSRVTAVEPLQFCT--------KHLAIMEGSATQGDNRETHAVGVL 220
Query: 522 RHTARLINALVAARKPYEILIFPDERH 548
+ L FP+ H
Sbjct: 221 SKIHTTLTILKDKGVNAVFWDFPNLGH 247
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 82.8 bits (203), Expect = 6e-18
Identities = 37/299 (12%), Positives = 69/299 (23%), Gaps = 54/299 (18%)
Query: 309 PRIKRLQLEPPDI----VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLV 364
P +R++ + V G + G L P ++ G +
Sbjct: 41 PVFERMESHLKTVEAYDVTFSGYRGQRIKGWLLVPKL---EEEKLPCVVQYIGYNGGR-- 95
Query: 365 CDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHN---------------- 408
+ S G + + +D RG LK +
Sbjct: 96 ------GFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGIL 149
Query: 409 -----CGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS 463
R D + E I + G S GG ++ A
Sbjct: 150 DPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAKALLCD 209
Query: 464 GAPVTSWDGYDTFYTE-------KYMGLPSEDPVGY----EYSSVMHHVHKMKGKLLLVH 512
+ + ++ + Y ++ + K L
Sbjct: 210 VPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSV 269
Query: 513 GMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
G++D N P EI I+P H +F+++
Sbjct: 270 GLMDNICPPSTVFAAYNYY---AGPKEIRIYPYNNHEGGGSFQA----VEQVKFLKKLF 321
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Score = 81.5 bits (199), Expect = 7e-18
Identities = 58/268 (21%), Positives = 102/268 (38%), Gaps = 14/268 (5%)
Query: 308 VPRIKRLQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDS 367
+P R + +V +++ DG+ + + + P P T++ V+GGP +
Sbjct: 1 LPEDLRRSIAGSRLVWVESFDGSRVPTYVLESGR---APTPGPTVVLVHGGPFAE----- 52
Query: 368 WINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427
++ D A L + G V + RG+ E +K E + A +
Sbjct: 53 DSDSWDTFAASLAAAGFHVVMPNYRGSTGY--GEEWRLKIIGDPCGGELEDVSAAARWAR 110
Query: 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYM----G 483
+ + G+SYGGY++ L P +F+ V+GA V W+ +
Sbjct: 111 ESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQ 170
Query: 484 LPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIF 543
L S ++HV ++K L L+H D + RL+ L+A K +E I
Sbjct: 171 LTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHII 230
Query: 544 PDERHMPRRHRDRIYMEERIWEFIERTL 571
PD H D + + F+
Sbjct: 231 PDAGHAINTMEDAVKILLPAVFFLATQR 258
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 80.6 bits (197), Expect = 3e-17
Identities = 35/294 (11%), Positives = 77/294 (26%), Gaps = 50/294 (17%)
Query: 309 PRIKRLQLEPPDI----VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLV 364
P ++ + + + ++ + G P P+ ++ +G
Sbjct: 42 PDLQPVDYPADGVKVYRLTYKSFGNARITGWYAVP----DKEGPHPAIVKYHGYN----- 92
Query: 365 CDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRID----------- 413
+ + G + + RG R + H G +
Sbjct: 93 --ASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYY 150
Query: 414 ---AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470
D + E + IG+ G S GG L+ A ++++
Sbjct: 151 RGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNF 210
Query: 471 DGY-------------DTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDE 517
+ F + Y +M+ ++K +L+ G+ID+
Sbjct: 211 ERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDK 270
Query: 518 NVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571
N L E+ ++ H + F ++ L
Sbjct: 271 VTPPSTVFAAYNHL---ETKKELKVYRYFGHEYIPA-----FQTEKLAFFKQIL 316
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} Length = 385 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Score = 79.8 bits (195), Expect = 1e-16
Identities = 25/164 (15%), Positives = 47/164 (28%), Gaps = 10/164 (6%)
Query: 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWI---NTVDMRAQY 378
V + DG LY + P + P + Y + + +
Sbjct: 31 VMVPMRDGVKLYTVIVIPKNA--RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDV 88
Query: 379 LRSKGILVWKLDNRGTARRGLKFE-----ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVG 433
G + D RG + + + D +WL+ G
Sbjct: 89 FVEGGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNG 148
Query: 434 HIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477
+G+ G SY G+ + L + A +P+ D ++
Sbjct: 149 RVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDGWMGDDWF 192
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Score = 78.6 bits (193), Expect = 1e-16
Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 9/124 (7%)
Query: 434 HIGLYGWSYGGYLSAITLARFPDVFQCAVSG-APVTSWDGYDTFYTE------KYMGLPS 486
+ + G + GGY++A + DVF A + +YT + P+
Sbjct: 12 SVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPT 71
Query: 487 EDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEI--LIFP 544
+ + + + + + K+ + G D V +L L + +
Sbjct: 72 ANMKSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTT 131
Query: 545 DERH 548
H
Sbjct: 132 GAVH 135
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} Length = 381 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Score = 77.1 bits (188), Expect = 9e-16
Identities = 29/165 (17%), Positives = 51/165 (30%), Gaps = 13/165 (7%)
Query: 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISV----YGGPCVQLVCDSWINTVDMRAQ 377
V I DG L+ + P G +++ G +L + +
Sbjct: 27 VMIPMRDGVKLHTVIVLPK----GAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDD 82
Query: 378 YLRSKGILVWKLDNRGTARRGLKFE-----ASIKHNCGRIDAEDQLTGAEWLIKQGLAKV 432
G + D RG + + A D +WL+K
Sbjct: 83 VFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN 142
Query: 433 GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477
G +G+ G SY G+ + L + AV +P+ D ++
Sbjct: 143 GKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDGWMGDDWF 187
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 73.3 bits (178), Expect = 6e-15
Identities = 45/270 (16%), Positives = 83/270 (30%), Gaps = 25/270 (9%)
Query: 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS 381
+ + DGT + + + + + YGG + + + R ++R
Sbjct: 10 IFYPSKDGTKIPMFIVHKKGIKLDGS-HPAFLYGYGGFNISITPNYS----VSRLIFVRH 64
Query: 382 KGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWS 441
G ++ + RG G + + +D AE+LIK+G + + G S
Sbjct: 65 MGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGS 124
Query: 442 YGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDP------------ 489
GG L A + PD+F C ++ V + +
Sbjct: 125 NGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKY 184
Query: 490 VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR-------KPYEILI 542
+ +LL+ D+ V H+ + I L P I +
Sbjct: 185 SPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHV 244
Query: 543 FPDERHMPRRHRD-RIYMEERIWEFIERTL 571
H + I ++ FI R L
Sbjct: 245 DTKAGHGAGKPTAKVIEEVSDMFAFIARCL 274
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} Length = 405 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Score = 74.6 bits (182), Expect = 7e-15
Identities = 28/244 (11%), Positives = 57/244 (23%), Gaps = 65/244 (26%)
Query: 377 QYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKV---- 432
Y ++G + GT + +WL + A
Sbjct: 130 DYFLTRGFASIYVAGVGTRSSDGFQTSG-----DYQQIYSMTAVIDWLNGRARAYTSRKK 184
Query: 433 ----------GHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW------------ 470
G + + G SY G ++ + + ++ A ++SW
Sbjct: 185 THEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRS 244
Query: 471 ---------------------------------DGYDTFYTEKYMGLPSEDPVGYEYSSV 497
+ T + + +
Sbjct: 245 PGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNY 304
Query: 498 MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRI 557
+ + K+K +L+VHG+ D NV AL + +
Sbjct: 305 LINTDKVKADVLIVHGLQDWNVTPEQAYNFWKAL-PEGHAKHAFLHRGAHIYMNSWQSID 363
Query: 558 YMEE 561
+ E
Sbjct: 364 FSET 367
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 70.8 bits (172), Expect = 9e-14
Identities = 43/266 (16%), Positives = 80/266 (30%), Gaps = 34/266 (12%)
Query: 316 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMR 375
L PP DG + + P+ GP P+ +I + G +S
Sbjct: 102 LSPPAERHELVVDGIPMPVYVRIPE----GPGPHPAVIMLGGL-------ESTKEESFQM 150
Query: 376 AQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEW-LIKQGLAKVGH 434
+ +G+ D ++ D E + L K +
Sbjct: 151 ENLVLDRGMATATFDGP-------GQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDA 203
Query: 435 IGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF---------YTEKYMGLP 485
IG+ G S GG + + A P +S + D +D Y K L
Sbjct: 204 IGVLGRSLGGNYALKSAACEPR-LAACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLE 262
Query: 486 SEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD 545
+ + ++ ++HG+ DE V ++ + A +++ D
Sbjct: 263 EARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHL--NLVVEKD 319
Query: 546 ERHMPRRHRDRIYMEERIWEFIERTL 571
H H I + +++ L
Sbjct: 320 GDHC--CHNLGIRPRLEMADWLYDVL 343
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 57.9 bits (138), Expect = 5e-10
Identities = 30/200 (15%), Positives = 46/200 (23%), Gaps = 12/200 (6%)
Query: 376 AQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK----QGLAK 431
+G L+ D R +S L E +
Sbjct: 44 LPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRF 103
Query: 432 VGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVG 491
+ L G S G +++ + LA E
Sbjct: 104 GLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPG-----VLAL 158
Query: 492 YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR 551
Y+ LL +HG D V + + AL + F +E
Sbjct: 159 YQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGA--- 215
Query: 552 RHRDRIYMEERIWEFIERTL 571
H M F+E L
Sbjct: 216 GHTLTPLMARVGLAFLEHWL 235
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 58.4 bits (140), Expect = 5e-10
Identities = 30/252 (11%), Positives = 57/252 (22%), Gaps = 39/252 (15%)
Query: 324 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG 383
++ N+G L+ P E+ P T++ G A+YL + G
Sbjct: 9 LRVNNGQELHVWETPPKEN--VPFKNNTILIASGFARRMDHFAGL-------AEYLSTNG 59
Query: 384 ILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYG 443
V++ D+ SI +IGL S
Sbjct: 60 FHVFRYDSLH---HVGLSSGSIDEFTMTTGKNS---LCTVYHWLQTKGTQNIGLIAASLS 113
Query: 444 GYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYS-------- 495
++ ++ F G + E P ++
Sbjct: 114 ARVAYEVISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEV 173
Query: 496 --------------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEIL 541
S + V L+ D+ V ++ +
Sbjct: 174 FVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLY-- 231
Query: 542 IFPDERHMPRRH 553
H +
Sbjct: 232 SLLGSSHDLGEN 243
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Score = 56.3 bits (134), Expect = 2e-09
Identities = 27/250 (10%), Positives = 60/250 (24%), Gaps = 18/250 (7%)
Query: 314 LQLEPPDIVQIQANDGTVLYGALYKPDESR----YGPP------PYKTLISVYGGPCVQL 363
+ P + G ++ + ++ Y P Y ++GG +
Sbjct: 10 YRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENEN 69
Query: 364 VCDSWINTV----DMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLT 419
S + D + ++V G F + N T
Sbjct: 70 TIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYST 129
Query: 420 GA-EWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYT 478
A + A H G G++ GG + + D + + +
Sbjct: 130 YAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKA 189
Query: 479 EKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPY 538
+ + V + + M + + ++ +
Sbjct: 190 NSIAEAINRSGLSKREYFVFAATGS---EDIAYANMNPQIEAMKALPHFDYTSDFSKGNF 246
Query: 539 EILIFPDERH 548
L+ P H
Sbjct: 247 YFLVAPGATH 256
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 55.0 bits (131), Expect = 7e-09
Identities = 29/259 (11%), Positives = 62/259 (23%), Gaps = 37/259 (14%)
Query: 345 GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404
G L + G W ++ G+ V ++ ++ +
Sbjct: 30 GGANSPALYLLDGLRAQDDF-SGWDINTPAF-EWYDQSGLSVVMPVGGQSSFYSDWYQPA 87
Query: 405 IKHNCGRIDAEDQLTGAE---WLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCA 461
+ + +E WL K + G S + P F A
Sbjct: 88 CGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYA 147
Query: 462 VSGAPVTS-----WDGYDTFYTEKYMGLPSEDPVG------YEYSSVMHHVHKMKGKLL- 509
+ + + G + D G ++ + + +V K+
Sbjct: 148 GAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTR 207
Query: 510 ----------------LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE-RHMPRR 552
+ E + +A A + FPD H
Sbjct: 208 VWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWEY 267
Query: 553 HRDRIYMEERIWEFIERTL 571
++ + ++R L
Sbjct: 268 WGAQL---NAMKPDLQRAL 283
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Score = 53.3 bits (126), Expect = 3e-08
Identities = 27/158 (17%), Positives = 40/158 (25%), Gaps = 18/158 (11%)
Query: 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISV--YGGPCVQLVCDSWINTVDMRAQYL 379
V + DG L LY+PD P L+ Y V +T
Sbjct: 8 VMVPMRDGVRLAVDLYRPD----ADGPVPVLLVRNPYDKFDVFAW-----STQSTNWLEF 58
Query: 380 RSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYG 439
G V D RG +F + D + W G++G++G
Sbjct: 59 VRDGYAVVIQDTRGLFASEGEFVPHVDDEADAEDTLSWILEQAWCD-------GNVGMFG 111
Query: 440 WSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477
SY G + +
Sbjct: 112 VSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYG 149
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} Length = 246 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Score = 48.8 bits (115), Expect = 6e-07
Identities = 20/228 (8%), Positives = 55/228 (24%), Gaps = 20/228 (8%)
Query: 318 PPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRA 376
P + ++ ++ + + + G Q + +
Sbjct: 14 PAKEIIWKSERLKNSRRVWIFTTGD--VTAEERPLAVLLDGEFWAQ-----SMPVWPVLT 66
Query: 377 QYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIG 436
+ + + + + + +L +I +
Sbjct: 67 SLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSDRADRTV 126
Query: 437 LYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSS 496
+ G S+GG + +P+ F C +S + W +
Sbjct: 127 VAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG-----------GQQEGVLLEKL 175
Query: 497 VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544
V +++L G+ + + R L L ++
Sbjct: 176 KAGEVSAEGLRIVLEAGIREPMIM-RANQALYAQLHPIKESIFWRQVD 222
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Score = 47.0 bits (110), Expect = 2e-06
Identities = 27/243 (11%), Positives = 57/243 (23%), Gaps = 26/243 (10%)
Query: 328 DGTVLYGALYKPDESRYGP-PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILV 386
+ +Y P Y Y L ++G + ++ A L ++G +
Sbjct: 32 TNSTRPARVYLPPG--YSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIK 89
Query: 387 WKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYL 446
+ A N + + E H + G S GG
Sbjct: 90 PLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESNYSVY-TDREHRAIAGLSMGGGQ 148
Query: 447 SAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKG 506
S D F + + + + + +
Sbjct: 149 SFNIGLTNLDKFAYIGPISAAPNTYPNERLFPDGG-----------------KAAREKLK 191
Query: 507 KLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEF 566
L + G D + R+ VA + + H + ++ +
Sbjct: 192 LLFIACGTNDSLIG--FGQRVHEYCVANNINHVYWLIQGGGHDFNVWKPGLW---NFLQM 246
Query: 567 IER 569
+
Sbjct: 247 ADE 249
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.6 bits (106), Expect = 6e-06
Identities = 33/263 (12%), Positives = 72/263 (27%), Gaps = 24/263 (9%)
Query: 320 DIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMR--AQ 377
+ V+ + D T+ L + S + +I ++GG
Sbjct: 5 NTVRAISPDITLFNKTLTFQEIS---QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKS 61
Query: 378 YLRSKGILVWKLDNR----GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVG 433
+ + ++ R T R L S + + +
Sbjct: 62 MDTESTVCQYSIEYRLSPEITNPRNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQI 121
Query: 434 HIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYE 493
L + + + + + + S Y E P G +
Sbjct: 122 LAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTRLAFPDGIQ 181
Query: 494 Y---------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP 544
V + + + LVH DE + R T LI+ L + +++ +
Sbjct: 182 MYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDD 241
Query: 545 DERHMPRRHRDRIYMEERIWEFI 567
H + +Y ++ ++I
Sbjct: 242 LGLH------NDVYKNGKVAKYI 258
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} Length = 233 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Score = 44.7 bits (104), Expect = 1e-05
Identities = 28/229 (12%), Positives = 59/229 (25%), Gaps = 34/229 (14%)
Query: 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMR--AQYL 379
+ IQ+ DG + P ++ P + + + + MR +L
Sbjct: 6 ISIQSYDGHTFGALVGSPAKAPA--------------PVIVIAQEIFGVNAFMRETVSWL 51
Query: 380 RSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYG 439
+G D G + + + Q E + A + +
Sbjct: 52 VDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQP 111
Query: 440 WSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMH 499
+S G V K + G ++
Sbjct: 112 YSNG-----------------KVGLVGYCLGGALAFLVAAKGYVDRAVGYYGVGLEKQLN 154
Query: 500 HVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548
V ++K L G ++ + +LI A ++ + + H
Sbjct: 155 KVPEVKHPALFHMGG-QDHFVPAPSRQLITEGFGANPLLQVHWYEEAGH 202
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 42.9 bits (99), Expect = 7e-05
Identities = 36/275 (13%), Positives = 73/275 (26%), Gaps = 42/275 (15%)
Query: 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDN 391
+Y P ++ P + ++G + ++ + +Y KG + +D
Sbjct: 46 MYVRYQIPQRAKRYP-----ITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQ 100
Query: 392 RGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGG------Y 445
G R A G+ A + A Y ++
Sbjct: 101 SGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQA 160
Query: 446 LSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYE------------ 493
+ + PD + P + + + L Y
Sbjct: 161 QAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGIT 220
Query: 494 ---------YSSVMHHVHKMKGKLLLVHGMIDENV-----HFRHTARLINALVAARKPYE 539
+L+V G E + I+AL AA +
Sbjct: 221 AIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQ 280
Query: 540 ILIFPDE-----RHMPRRHRDRIYMEERIWEFIER 569
++ P HM + R+ + + + I ++I R
Sbjct: 281 LMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGR 315
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 40.7 bits (94), Expect = 3e-04
Identities = 27/248 (10%), Positives = 59/248 (23%), Gaps = 33/248 (13%)
Query: 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKL 389
V ++ + + ++ + + G + W + G+ V
Sbjct: 10 QVPSASMGRDIKVQFQGGGPHAVYLLDGLRAQD-DYNGWDINTPA-FEEYYQSGLSVIMP 67
Query: 390 DNRGTARRGLKFEASIKHNCGRIDAEDQLTGAE---WLIKQGLAKVGHIGLYGWSYGGYL 446
++ ++ S + + E WL G S G
Sbjct: 68 VGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGS 127
Query: 447 SAITLARFPDVFQCAVSGAPVTS-----WDGYDTFYTEKYMGLPSEDPVG------YEYS 495
+ I A +P F A S + + W G + G ++ +
Sbjct: 128 ALILAAYYPQQFPYAASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRN 187
Query: 496 SVMHHVHKMKGKLL-----------------LVHGMIDENVHFRHTARLINALVAARKPY 538
M + ++ + E + R + A
Sbjct: 188 DPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAADGGRN 247
Query: 539 EILIFPDE 546
+ FP
Sbjct: 248 GVFNFPPN 255
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 39.3 bits (90), Expect = 5e-04
Identities = 17/166 (10%), Positives = 37/166 (22%), Gaps = 6/166 (3%)
Query: 345 GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS 404
G + L ++G + + A G
Sbjct: 19 GKESRECLFLLHGSGVD---ETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTR 75
Query: 405 IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSG 464
+ + K+ + H G+S G L + + P + + A
Sbjct: 76 FEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALL 135
Query: 465 APVTSW---DGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGK 507
P+ D + + D + + + G
Sbjct: 136 RPMPVLDHVPATDLAGIRTLIIAGAADETYGPFVPALVTLLSRHGA 181
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 38.7 bits (89), Expect = 0.001
Identities = 23/156 (14%), Positives = 45/156 (28%), Gaps = 16/156 (10%)
Query: 367 SWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426
+W+ + +V G +E + + +WL
Sbjct: 44 NWVTAGNAMNTLAGKGISVV--APAGGAYSMYTNWEQDGSKQWDTFLSAE---LPDWLAA 98
Query: 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV-----TSWDGYDTFYTEKY 481
G G + GGY + A PD F A S + T+ +G +++
Sbjct: 99 NRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQF 158
Query: 482 MGLPSEDPVG------YEYSSVMHHVHKMKGKLLLV 511
G+ + G +++ H + V
Sbjct: 159 GGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRV 194
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 571 | |||
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 100.0 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 100.0 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 100.0 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 100.0 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.96 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.94 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.93 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.93 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.93 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.91 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.91 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.89 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.88 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.87 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.87 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.87 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.87 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.86 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.85 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.85 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.85 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.85 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.85 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.84 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.84 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.84 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.83 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.83 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.83 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.83 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.83 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.82 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.82 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.82 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.81 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.8 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.8 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.8 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.8 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.8 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.8 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.8 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.8 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.79 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.79 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.79 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.78 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.78 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.78 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.78 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.78 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.77 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.76 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.76 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.75 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.75 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.75 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.74 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.74 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.71 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.69 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.65 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.64 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.64 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 99.64 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.63 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.63 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.61 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.55 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.54 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 99.5 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.5 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.39 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.36 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 99.35 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.34 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.32 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.3 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.26 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.23 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.21 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.2 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.18 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.11 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.05 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 98.97 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 98.95 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 98.94 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 98.91 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.88 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.83 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 98.78 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 98.75 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.74 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 98.74 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.69 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 98.69 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 98.68 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.67 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.62 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 98.6 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.58 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 98.55 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.53 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 98.53 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 98.52 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 98.5 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 98.47 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 98.42 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.38 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.32 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.31 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.29 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.28 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.24 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.21 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 98.14 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.13 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 98.1 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.09 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 98.09 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.05 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.04 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 97.96 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 97.81 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 97.81 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 97.81 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 97.79 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 97.79 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 97.78 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.74 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 97.73 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 97.71 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.61 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 97.58 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.56 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.46 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 97.36 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 97.31 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 97.31 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 97.22 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 97.14 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 97.11 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 97.07 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 97.03 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 96.93 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 96.86 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.83 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 96.72 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 96.72 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 96.66 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.65 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 96.43 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 96.4 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 96.26 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 96.25 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 96.16 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 96.13 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 96.03 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 95.99 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 95.87 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 95.28 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 95.16 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 95.02 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 94.66 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 94.23 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 94.19 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 94.16 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 94.09 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 93.31 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 93.16 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 92.74 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 92.55 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 92.51 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 91.81 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 91.32 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 91.16 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 91.15 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 90.2 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 88.21 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 86.63 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 86.21 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 85.31 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 84.04 |
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-38 Score=320.84 Aligned_cols=292 Identities=23% Similarity=0.329 Sum_probs=239.2
Q ss_pred eeecccceeeeeccC-CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEEC
Q 008274 9 QTHGLAEYIAQEEMD-RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSA 87 (571)
Q Consensus 9 ~~~g~~~~~~~~~~~-~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl 87 (571)
|+||++||+||||+. ...++||||||++|||.+.+++.++.+.++.+.+.. + +....++|+++|++|+.++|+++|+
T Consensus 158 i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~-~-p~~~~~~Yp~~G~~np~~~l~v~d~ 235 (465)
T d1xfda1 158 IYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSI-Y-PTVKPYHYPKAGSENPSISLHVIGL 235 (465)
T ss_dssp EEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSS-S-CCCEEEECCBTTSCCCEEEEEEEES
T ss_pred eeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccc-c-ceeeeeeccccCCCCCceeEEEEec
Confidence 899999999999985 578999999999999999999999999998876553 3 7788999999999999999999999
Q ss_pred CCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccC
Q 008274 88 AGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPL 167 (571)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~ 167 (571)
+++..+...... ......+.++..+.|+||+++++++.+|.++...|+.||+.+|+++.+..+..++|++...
T Consensus 236 ~~~~~~~~~~~~--~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~----- 308 (465)
T d1xfda1 236 NGPTHDLEMMPP--DDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQN----- 308 (465)
T ss_dssp SSSCCCEECCCC--CCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCC-----
T ss_pred CCCcEEEEEecc--CcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccC-----
Confidence 988765543321 1122346688999999999999999999999999999999999999998888888986421
Q ss_pred CCCCccCCCe--EE--EEEecCCccEEEEEe-------CCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 168 DKGVTKYSGG--FI--WASEKTGFRHLYLHD-------INGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 168 ~~~~~~~~d~--~~--~~s~~~g~~~l~~~~-------~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
..+.+++|+ ++ +.++++|+.|+|.+. ..++..++||.|+|+|.++..|+++++.|||+++.++|.++|
T Consensus 309 -~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~h 387 (465)
T d1xfda1 309 -EEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQ 387 (465)
T ss_dssp -CCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCE
T ss_pred -CceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceE
Confidence 111234443 43 457788888888874 345667999999999999988999999999999999999999
Q ss_pred EEEEEeCCCCCCCCCCCeEecC----CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCChhhhc
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTN----GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTVPRIK 312 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~----~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 312 (571)
||++++ +|+. ..+|||+ .++.++++|||+|++++..|++++.|+ ..+++..+++.++.|+.|..+...+.
T Consensus 388 ly~v~l--~g~~---~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~-~~~~~~~~~~~~~~Le~N~~l~~~l~ 461 (465)
T d1xfda1 388 LYSANT--VGNF---NRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPM-VTVHNTTDKKKMFDLETNEHVKKAIN 461 (465)
T ss_dssp EEEECS--STTC---CCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCC-EEEEETTTCCEEEEEECCHHHHHHHH
T ss_pred EEEEEC--CCCC---cceeeccccCCCCCEEEEEECCCCCEEEEEeecCCCCe-EEEEECCCCCEEEEEcCCHHHHHHHH
Confidence 999999 5541 3456654 457789999999999999999987665 77778888999999999888777776
Q ss_pred cCCC
Q 008274 313 RLQL 316 (571)
Q Consensus 313 ~~~~ 316 (571)
+..|
T Consensus 462 ~~~~ 465 (465)
T d1xfda1 462 DRQM 465 (465)
T ss_dssp TSCC
T ss_pred hccC
Confidence 6543
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-36 Score=285.48 Aligned_cols=246 Identities=28% Similarity=0.494 Sum_probs=209.8
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh
Q 008274 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF 401 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~ 401 (571)
.+++. ||..|+++++.|++.+ ..+++|+||++||||+.....+.|...+ ..+.|+++||+|+++|+||++++|.++
T Consensus 6 ~~i~~-dg~~l~~~l~~P~~~~-~~~k~Pviv~~HGGp~~~~~~~~~~~~~--~~~~la~~G~~vv~~d~rGs~~~g~~~ 81 (258)
T d1xfda2 6 RDIEI-DDYNLPMQILKPATFT-DTTHYPLLLVVDGTPGSQSVAEKFEVSW--ETVMVSSHGAVVVKCDGRGSGFQGTKL 81 (258)
T ss_dssp CCEEE-TTEEECCBEEBCSSCC-SSSCEEEEEECCCCTTCCCCCCCCCCSH--HHHHHHTTCCEEECCCCTTCSSSHHHH
T ss_pred EEEee-CCeEEEEEEEECCCcC-CCCceeEEEEEcCCccccCcCCCcCcch--HHHHHhcCCcEEEEeccccccccchhH
Confidence 33443 8999999999998863 3478999999999988766666665433 356799999999999999999999988
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC----CeeEEEEEcCccCCcccccchh
Q 008274 402 EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP----DVFQCAVSGAPVTSWDGYDTFY 477 (571)
Q Consensus 402 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~ 477 (571)
......+++..+++|+.++++++.+++.+|++||+|+|+|+||++++.++...+ ..+++.+..+++..+.......
T Consensus 82 ~~~~~~~~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (258)
T d1xfda2 82 LHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAF 161 (258)
T ss_dssp HHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHH
T ss_pred hhhhhccchhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecccccc
Confidence 888888888788999999999999999999999999999999999998887654 4678888888887776555555
Q ss_pred hhhhcCCCCCChhhhccCCcchhhccC-CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcH
Q 008274 478 TEKYMGLPSEDPVGYEYSSVMHHVHKM-KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR 556 (571)
Q Consensus 478 ~~~~~g~~~~~~~~~~~~s~~~~~~~~-~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 556 (571)
...+++.+..+...+...++...+.++ ++|+|++||+.|.+||++++.+++++|++.++++++++||+++|++......
T Consensus 162 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~ 241 (258)
T d1xfda2 162 SERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLK 241 (258)
T ss_dssp HHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHH
T ss_pred ccccccccccchHHhhccchhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCH
Confidence 555667777777888888888888886 5799999999999999999999999999999999999999999999777778
Q ss_pred HHHHHHHHHHHHHhC
Q 008274 557 IYMEERIWEFIERTL 571 (571)
Q Consensus 557 ~~~~~~i~~fl~~~l 571 (571)
..+++.+++||+++|
T Consensus 242 ~~~~~~~~~f~~~~~ 256 (258)
T d1xfda2 242 QHLYRSIINFFVECF 256 (258)
T ss_dssp HHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHhh
Confidence 888999999999875
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=1.5e-34 Score=272.89 Aligned_cols=251 Identities=29% Similarity=0.560 Sum_probs=216.3
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..|.+.|...+|.++.++++.|++++ +.+++|+||++||||+.......|.. ......++++||+|+.+|+||++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~lP~~~~-~~kk~P~iv~~HGGp~~~~~~~~~~~--~~~~~~~a~~g~~V~~~d~rg~~~~ 78 (258)
T d2bgra2 2 PSKKLDFIILNETKFWYQMILPPHFD-KSKKYPLLLDVYAGPCSQKADTVFRL--NWATYLASTENIIVASFDGRGSGYQ 78 (258)
T ss_dssp CEEEEEEEEETTEEEEEEEEECTTCC-TTSCEEEEEECCCCTTCCCCCCCCCC--SHHHHHHHTTCCEEEEECCTTCSSS
T ss_pred CceeEEEEEeCCcEEEEEEEECCCcC-CCCCeeEEEEEcCCCCcccCCCccCc--CHHHHHHhcCCcEEEeecccccCCc
Confidence 35778899899999999999999874 34899999999998776554444433 3345677899999999999999999
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchh
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 477 (571)
+..+......+++..+..|+.++++++.+++.+|.++|+++|+|+||.+++.++..+|+++.+++..++......+....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (258)
T d2bgra2 79 GDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVY 158 (258)
T ss_dssp CHHHHGGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHH
T ss_pred chHHHHhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeecccccccccccc
Confidence 98888888888888888899999999999999999999999999999999999999999999999999888776665555
Q ss_pred hhhhcC--CCCCChhhhccCCcchhhccCC-CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCC
Q 008274 478 TEKYMG--LPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHR 554 (571)
Q Consensus 478 ~~~~~g--~~~~~~~~~~~~s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 554 (571)
.+...+ ....+.+.+...+++..+++++ +|+|++||++|.+||+.++++++++|+++|+++++++||+++|++....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~ 238 (258)
T d2bgra2 159 TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASST 238 (258)
T ss_dssp HHHHHCCCSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHH
T ss_pred cchhcccccchhhHHHhhcccccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCc
Confidence 554443 3445667778889998888886 7999999999999999999999999999999999999999999997777
Q ss_pred cHHHHHHHHHHHHHHhC
Q 008274 555 DRIYMEERIWEFIERTL 571 (571)
Q Consensus 555 ~~~~~~~~i~~fl~~~l 571 (571)
....+++.+.+||+++|
T Consensus 239 ~~~~~~~~i~~fl~~~l 255 (258)
T d2bgra2 239 AHQHIYTHMSHFIKQCF 255 (258)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHh
Confidence 88899999999999986
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=5.9e-35 Score=275.99 Aligned_cols=248 Identities=24% Similarity=0.364 Sum_probs=211.4
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCC
Q 008274 314 LQLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG 393 (571)
Q Consensus 314 ~~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG 393 (571)
+.+...+.+.|++.||.+|+++++.|++. +++.|+||++|||++.+. . ..+...++.|+++||+|+++|+|+
T Consensus 7 ~~~~~~~~v~~~s~dG~~i~~~l~~p~~~---~~~~Pviv~~HGG~~~~~-~----~~~~~~~~~la~~G~~v~~~d~r~ 78 (260)
T d2hu7a2 7 RSIAGSRLVWVESFDGSRVPTYVLESGRA---PTPGPTVVLVHGGPFAED-S----DSWDTFAASLAAAGFHVVMPNYRG 78 (260)
T ss_dssp HTEEEEEEEEEECTTSCEEEEEEEEETTS---CSSEEEEEEECSSSSCCC-C----SSCCHHHHHHHHHTCEEEEECCTT
T ss_pred cccCceEEEEEECCCCCEEEEEEEeCCCC---CCCceEEEEECCCCccCC-C----ccccHHHHHHHhhccccccceeee
Confidence 44567788999999999999999999764 268899999999877653 2 234556888999999999999999
Q ss_pred CCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc
Q 008274 394 TARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY 473 (571)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~ 473 (571)
+++++..+......+++..+++|+.++++++.++. +..+++|+|+|+||.+++.++..+|+.+++++..+|+.++...
T Consensus 79 ~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~ 156 (260)
T d2hu7a2 79 STGYGEEWRLKIIGDPCGGELEDVSAAARWARESG--LASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEM 156 (260)
T ss_dssp CSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTT--CEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHH
T ss_pred ccccccccccccccccchhhhhhhccccccccccc--ccceeeccccccccccccchhccCCcccccccccccchhhhhh
Confidence 99999888877777777777899999999999876 6789999999999999999999999999999999999886532
Q ss_pred cc----hhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 474 DT----FYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 474 ~~----~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
.. .+..........+.+.+...+|+..++++++|+|++||+.|.+||++++.+++++|+++++++++++||+++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 236 (260)
T d2hu7a2 157 YELSDAAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHA 236 (260)
T ss_dssp HHTCCHHHHHHHHHHHCSCHHHHHHTCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSS
T ss_pred hcccccccccccccccccccccccccchhhcccccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCC
Confidence 21 11111112234467788899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHhC
Q 008274 550 PRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 550 ~~~~~~~~~~~~~i~~fl~~~l 571 (571)
+...++...+++.+.+||.+||
T Consensus 237 ~~~~e~~~~~~~~~~~fl~~hl 258 (260)
T d2hu7a2 237 INTMEDAVKILLPAVFFLATQR 258 (260)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHhHHHHHHHHHHHHHHHh
Confidence 9877888899999999999985
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=2.1e-28 Score=251.71 Aligned_cols=294 Identities=19% Similarity=0.263 Sum_probs=223.8
Q ss_pred eeeecccceeeeecc-CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEE
Q 008274 8 LQTHGLAEYIAQEEM-DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 86 (571)
Q Consensus 8 ~~~~g~~~~~~~~~~-~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 86 (571)
.++||.+||+|+|+. ....++||||||++|||.+.+.+.++.+.+..+.......+....++|+++|..++...+++++
T Consensus 155 ~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~ 234 (470)
T d2bgra1 155 IIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVN 234 (470)
T ss_dssp TEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEE
T ss_pred cccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEEEeeccCCCCCCeeeeeccccccccCCcceEEEEE
Confidence 368999999998876 5688999999999999999999999988887765543223566778999999999999999999
Q ss_pred CCCCceEEEecc--CCCC-CCCCCCceeEEEEEccCCeEEEEEEeccCccE--EEEEEECCCCceEEEE-----EeecCC
Q 008274 87 AAGGPVSWMDLQ--CGGT-DQNYDEEYLARVNWMHGNILTAQVLNRSQTKL--KVLKFDIKTGQRKVIL-----VEELDS 156 (571)
Q Consensus 87 l~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~--~i~~~d~~~g~~~~l~-----~~~~~~ 156 (571)
+++++....... .... .....+.++..+.|+++++.++++.+|.++.. .++.+|..+|..+.+. .....+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~~~~~~~~~~ 314 (470)
T d2bgra1 235 TDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTG 314 (470)
T ss_dssp GGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSS
T ss_pred CCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCcEEEEEEEeeeeeeccc
Confidence 998765322110 0000 12345678889999999998899888887643 6777788888877653 223345
Q ss_pred eeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCC--CCc
Q 008274 157 WVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLD--GPL 233 (571)
Q Consensus 157 w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~--~~~ 233 (571)
|+.......+.. ..++++ +++.++++|+.|||+++.+++..++||.+++++..+ ++.+++.|||+++.. .|.
T Consensus 315 ~i~~~~~~~~~~---~~~~~~~~~~~s~~dg~~~ly~~~~~g~~~~~lt~g~~~v~~~--~~~d~~~iyf~a~~~~~~p~ 389 (470)
T d2bgra1 315 WVGRFRPSEPHF---TLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGI--EALTSDYLYYISNEYKGMPG 389 (470)
T ss_dssp CSSSSSCCCCEE---CTTSSEEEEEEECTTSCEEEEEEETTCSCCEESCCSSSCEEEE--EEECSSEEEEEESCGGGCTT
T ss_pred eeecccCCCcee---eecCCCcEEEEeccCcCceeEEEeccCCceeeeccCCeeEEEE--EEECCCEEEEEEecCCCCcc
Confidence 654322212211 224445 577889999999999999999999999999998876 556788999999853 467
Q ss_pred eeEEEEEEeCCCCCCCCCCCeEecC-----CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCCCCCh
Q 008274 234 ESHLYCAKLYPDWNHTLEAPVKLTN-----GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQPLTV 308 (571)
Q Consensus 234 ~~~l~~~~l~~~g~~~~~~~~~lt~-----~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~~~~~ 308 (571)
++|||++++ ++. ...++||+ .++.++++|||||++++..+++++.|+ +.+++..+++.++.|+.|..+.
T Consensus 390 ~~~ly~v~~--~g~---~~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~-~~l~~~~~g~~v~~le~n~~l~ 463 (470)
T d2bgra1 390 GRNLYKIQL--SDY---TKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPL-YTLHSSVNDKGLRVLEDNSALD 463 (470)
T ss_dssp CBEEEEEET--TCT---TCEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCE-EEEEETTTTEEEEEEECCHHHH
T ss_pred eEEEEEEEC--CCC---CceeEecccccCCCCCEEEEEECCCCCEEEEEecCCCCCe-EEEEECCCCCEEEEEeccHHHH
Confidence 899999999 543 15677874 346788999999999999999998886 5677888999999998876665
Q ss_pred hhhc
Q 008274 309 PRIK 312 (571)
Q Consensus 309 ~~~~ 312 (571)
..+.
T Consensus 464 ~~l~ 467 (470)
T d2bgra1 464 KMLQ 467 (470)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5544
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.94 E-value=3.5e-26 Score=217.76 Aligned_cols=249 Identities=18% Similarity=0.182 Sum_probs=182.7
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
+++++.+++.||.+|+++++.|++.+ ..+++|+||++|||++.+..... .......++..|+.++..++++....
T Consensus 6 ~~e~v~~~s~DG~~i~~~l~~P~~~~-~~~~~P~iv~~HGG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T d1qfma2 6 QTVQIFYPSKDGTKIPMFIVHKKGIK-LDGSHPAFLYGYGGFNISITPNY----SVSRLIFVRHMGGVLAVANIRGGGEY 80 (280)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCC-CSSCSCEEEECCCCTTCCCCCCC----CHHHHHHHHHHCCEEEEECCTTSSTT
T ss_pred EEEEEEEECCCCCEEEEEEEEcCCCC-CCCCeEEEEEECCCCcccCCCCc----chhhhhhhcccceeeecccccccccc
Confidence 46889999999999999999999853 34789999999999887653222 12234566778999999999988776
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchh
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY 477 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 477 (571)
..................+...+..+...+...+...++++|+|.||+++...+...++++++++...++.++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (280)
T d1qfma2 81 GETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT 160 (280)
T ss_dssp HHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST
T ss_pred chhhhhcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhcccc
Confidence 65554444444433445566677777777777788899999999999999999999999999999999988764432111
Q ss_pred hh------hhcCCCCCChhh------hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHc-------CCCe
Q 008274 478 TE------KYMGLPSEDPVG------YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAA-------RKPY 538 (571)
Q Consensus 478 ~~------~~~g~~~~~~~~------~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~-------~~~~ 538 (571)
.. ...+........ +...++.........|+||+||++|.+||+.++.+|+++|++. ++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~ 240 (280)
T d1qfma2 161 IGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPL 240 (280)
T ss_dssp TGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCE
T ss_pred ccccceecccCCCcccccccccccccccccchhhhcccCCCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcE
Confidence 00 011111111112 2223444444444568999999999999999999999999754 6789
Q ss_pred eEEEcCCCCCCCCCCC-cHHHHHHHHHHHHHHhC
Q 008274 539 EILIFPDERHMPRRHR-DRIYMEERIWEFIERTL 571 (571)
Q Consensus 539 ~~~~~~~~~H~~~~~~-~~~~~~~~i~~fl~~~l 571 (571)
++++||++||++.... +..+.+.++++||+++|
T Consensus 241 ~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L 274 (280)
T d1qfma2 241 LIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCL 274 (280)
T ss_dssp EEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhc
Confidence 9999999999986543 34567778999999986
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=5.1e-26 Score=220.82 Aligned_cols=234 Identities=17% Similarity=0.119 Sum_probs=169.8
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
+.+.++|++.||.+|+++++.|++. ++.|+||++||+++... .+...+..|+++||+|+++|+||+|.+
T Consensus 55 ~~~~v~~~~~dg~~i~~~l~~P~~~----~~~P~vv~~HG~~~~~~-------~~~~~~~~la~~Gy~vi~~D~rG~G~s 123 (318)
T d1l7aa_ 55 KVYRLTYKSFGNARITGWYAVPDKE----GPHPAIVKYHGYNASYD-------GEIHEMVNWALHGYATFGMLVRGQQRS 123 (318)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEESSC----SCEEEEEEECCTTCCSG-------GGHHHHHHHHHTTCEEEEECCTTTSSS
T ss_pred EEEEEEEECCCCcEEEEEEEecCCC----CCceEEEEecCCCCCcc-------chHHHHHHHHHCCCEEEEEeeCCCCCC
Confidence 4567899999999999999999864 68899999999877643 234467889999999999999999987
Q ss_pred hhhhHHHHhccCCC--------------CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE
Q 008274 398 GLKFEASIKHNCGR--------------IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS 463 (571)
Q Consensus 398 ~~~~~~~~~~~~~~--------------~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~ 463 (571)
............+. ..+.|...+++++..++.+|..+++++|+|+||.+++..+...+.. +++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~~-~~~~~ 202 (318)
T d1l7aa_ 124 EDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIP-KAAVA 202 (318)
T ss_dssp CCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSCC-SEEEE
T ss_pred CCCcccchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCccc-ceEEE
Confidence 65432211111100 0135777888999999999999999999999999999999987765 45555
Q ss_pred cCccC-Ccccccc-----hh--h---hhhcCCCCCCh---hhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHH
Q 008274 464 GAPVT-SWDGYDT-----FY--T---EKYMGLPSEDP---VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLIN 529 (571)
Q Consensus 464 ~~~~~-~~~~~~~-----~~--~---~~~~g~~~~~~---~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~ 529 (571)
..|.. ++..... .+ . ....+...... ......++...++++++|+|++||++|.+||++++.++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~ 282 (318)
T d1l7aa_ 203 DYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYN 282 (318)
T ss_dssp ESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred eccccccHHHHhhcccccccchhhhhhhccccccccccccccccccccccccccCCCCEEEEEECCCCCcCHHHHHHHHH
Confidence 44433 3211100 00 0 00001111011 1123346667788999999999999999999999999888
Q ss_pred HHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 530 ALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++ +.+.++++||+++|.+ ..++.+++++||+++|
T Consensus 283 ~l---~~~~~l~~~~~~gH~~-----~~~~~~~~~~fl~~~L 316 (318)
T d1l7aa_ 283 HL---ETKKELKVYRYFGHEY-----IPAFQTEKLAFFKQIL 316 (318)
T ss_dssp HC---CSSEEEEEETTCCSSC-----CHHHHHHHHHHHHHHH
T ss_pred Hc---CCCcEEEEECCCCCCC-----cHHHHHHHHHHHHHhC
Confidence 76 6789999999999976 2467788999999986
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.93 E-value=7.3e-26 Score=222.61 Aligned_cols=233 Identities=15% Similarity=0.138 Sum_probs=169.5
Q ss_pred CCCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC
Q 008274 315 QLEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT 394 (571)
Q Consensus 315 ~~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 394 (571)
.-...+.+.++. +|..|+++++.|++. ++.|+||++||..+... .+..+++.|+++||+|+++|+||+
T Consensus 102 ~~~~~e~v~ip~-dg~~l~g~l~~P~~~----~~~P~Vi~~hG~~~~~e-------~~~~~~~~l~~~G~~vl~~D~~G~ 169 (360)
T d2jbwa1 102 LSPPAERHELVV-DGIPMPVYVRIPEGP----GPHPAVIMLGGLESTKE-------ESFQMENLVLDRGMATATFDGPGQ 169 (360)
T ss_dssp SSSCEEEEEEEE-TTEEEEEEEECCSSS----CCEEEEEEECCSSCCTT-------TTHHHHHHHHHTTCEEEEECCTTS
T ss_pred CCCCeEEeecCc-CCcccceEEEecCCC----CCceEEEEeCCCCccHH-------HHHHHHHHHHhcCCEEEEEccccc
Confidence 345678899997 788999999999763 67899999999755432 233457889999999999999999
Q ss_pred CCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc
Q 008274 395 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD 474 (571)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~ 474 (571)
|.+..... .......++..+++++...+.+|.+||+|+|+||||++++.+++..| +++++|+.+|+.+.....
T Consensus 170 G~s~~~~~------~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~ 242 (360)
T d2jbwa1 170 GEMFEYKR------IAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWD 242 (360)
T ss_dssp GGGTTTCC------SCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGG
T ss_pred cccCcccc------ccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHh
Confidence 86643211 11111235667889999998899999999999999999999999876 579999999887754332
Q ss_pred ch---hhhh--hc-CCCCCC---hhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCC
Q 008274 475 TF---YTEK--YM-GLPSED---PVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD 545 (571)
Q Consensus 475 ~~---~~~~--~~-g~~~~~---~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 545 (571)
.. .... +. +..... .......+....+.++++|+|++||++|. +|++++..+++++.. .+.+++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~--~~~~l~~~~~ 319 (360)
T d2jbwa1 243 LETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPA--EHLNLVVEKD 319 (360)
T ss_dssp GSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCG--GGEEEEEETT
T ss_pred hhhhhhhHHHHHhccCCchHHHHHHHHhhcchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCC--CCeEEEEECC
Confidence 11 1111 11 111100 01223344555688999999999999998 699999999887743 3578889999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 546 ERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 546 ~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++|... .+.......+.+||.++|
T Consensus 320 g~H~~~--~~~~~~~~~i~dWl~~~L 343 (360)
T d2jbwa1 320 GDHCCH--NLGIRPRLEMADWLYDVL 343 (360)
T ss_dssp CCGGGG--GGTTHHHHHHHHHHHHHH
T ss_pred CCcCCC--cChHHHHHHHHHHHHHHh
Confidence 999652 344566788999998864
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=2.2e-25 Score=216.92 Aligned_cols=235 Identities=16% Similarity=0.110 Sum_probs=167.6
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
+.+.++|++.||.+|+++++.|.+.. ++.|+||++||++.... .+ .....++++||+|+.+|+||+|.+
T Consensus 54 ~~~~v~~~s~dG~~l~~~l~~P~~~~---~~~P~Vv~~hG~~~~~~---~~-----~~~~~~a~~G~~v~~~D~rG~G~s 122 (322)
T d1vlqa_ 54 EAYDVTFSGYRGQRIKGWLLVPKLEE---EKLPCVVQYIGYNGGRG---FP-----HDWLFWPSMGYICFVMDTRGQGSG 122 (322)
T ss_dssp EEEEEEEECGGGCEEEEEEEEECCSC---SSEEEEEECCCTTCCCC---CG-----GGGCHHHHTTCEEEEECCTTCCCS
T ss_pred EEEEEEEECCCCcEEEEEEEeccCCC---CCccEEEEecCCCCCcC---cH-----HHHHHHHhCCCEEEEeeccccCCC
Confidence 45678999999999999999998642 67899999999876533 11 124578899999999999999877
Q ss_pred hhhhHHHHhccC------------C---------CCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC
Q 008274 398 GLKFEASIKHNC------------G---------RIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD 456 (571)
Q Consensus 398 ~~~~~~~~~~~~------------~---------~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~ 456 (571)
+........... + .....|+..+++++..++.+|.+|++++|+|+||++++.++...+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~- 201 (322)
T d1vlqa_ 123 WLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK- 201 (322)
T ss_dssp SSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-
T ss_pred CCCccccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-
Confidence 543211110000 0 001468889999999999999999999999999999998888765
Q ss_pred eeEEEEEcCccCCccc-cc-----chhh--hhhcC-CCCC---ChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHH
Q 008274 457 VFQCAVSGAPVTSWDG-YD-----TFYT--EKYMG-LPSE---DPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHT 524 (571)
Q Consensus 457 ~~~~~v~~~~~~~~~~-~~-----~~~~--~~~~g-~~~~---~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~ 524 (571)
+++++++..|...... .. ..+. ..+.. .+.. ..+.+...++...+.++++|+|++||++|.++|++++
T Consensus 202 ~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~ 281 (322)
T d1vlqa_ 202 KAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTV 281 (322)
T ss_dssp SCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHH
T ss_pred CccEEEEeCCccccHHHHHhhccccchhhHHhhhhcCcchhhhHHHHhhhhhHHHHHhcCCCCEEEEEeCCCCCcCHHHH
Confidence 5677777766554221 10 0000 01111 1111 1123445688889999999999999999999999998
Q ss_pred HHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 525 ARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 525 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.++++++ +.+.++++||+++|... .....+..++||+++|
T Consensus 282 ~~~~~~~---~~~~~l~~~p~~~H~~~----~~~~~~~~~~~l~~~l 321 (322)
T d1vlqa_ 282 FAAYNYY---AGPKEIRIYPYNNHEGG----GSFQAVEQVKFLKKLF 321 (322)
T ss_dssp HHHHHHC---CSSEEEEEETTCCTTTT----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHC---CCCeEEEEECCCCCCCc----cccCHHHHHHHHHHHh
Confidence 8777665 77899999999999762 2222345678998864
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.91 E-value=5.1e-24 Score=204.20 Aligned_cols=230 Identities=13% Similarity=0.089 Sum_probs=155.3
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC-CC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-AR 396 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~ 396 (571)
.+....++..||..+++|.+.|.+. .+++.|+||++||.+.... .|..++++|+++||.|+++|+||+ |.
T Consensus 3 ~~~~h~~~~~dg~~l~~w~~~p~~~--~~~~~~~Vvi~HG~~~~~~-------~~~~~a~~L~~~G~~Vi~~D~rGh~G~ 73 (302)
T d1thta_ 3 KTIAHVLRVNNGQELHVWETPPKEN--VPFKNNTILIASGFARRMD-------HFAGLAEYLSTNGFHVFRYDSLHHVGL 73 (302)
T ss_dssp SCEEEEEEETTTEEEEEEEECCCTT--SCCCSCEEEEECTTCGGGG-------GGHHHHHHHHTTTCCEEEECCCBCC--
T ss_pred eeeeeEEEcCCCCEEEEEEecCcCC--CCCCCCEEEEeCCCcchHH-------HHHHHHHHHHHCCCEEEEecCCCCCCC
Confidence 3466788899999999999999763 3367799999999766532 356679999999999999999997 44
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 476 (571)
+...+...... ....|+.++++++.++ +.++++|+||||||.+++.+|.. ..++++|+.+|+.+.......
T Consensus 74 S~g~~~~~~~~----~~~~dl~~vi~~l~~~---~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~~~~~ 144 (302)
T d1thta_ 74 SSGSIDEFTMT----TGKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRDTLEK 144 (302)
T ss_dssp ------CCCHH----HHHHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHHHHHH
T ss_pred CCCcccCCCHH----HHHHHHHHHHHhhhcc---CCceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHHHHHHH
Confidence 43322211111 1267889999999876 35689999999999999888764 346888888888765322110
Q ss_pred hhh-hhc-----CCCCCC--------hhhh--------c--cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHH
Q 008274 477 YTE-KYM-----GLPSED--------PVGY--------E--YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALV 532 (571)
Q Consensus 477 ~~~-~~~-----g~~~~~--------~~~~--------~--~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~ 532 (571)
... .+. ..+... ...+ + ..++...+.++++|+|++||++|..|+++.+..+++.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~ 224 (302)
T d1thta_ 145 ALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIR 224 (302)
T ss_dssp HHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCT
T ss_pred HHhhccchhhhhhccccccccccchhhHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCC
Confidence 000 000 000000 0000 0 012445678899999999999999999999999988763
Q ss_pred HcCCCeeEEEcCCCCCCCCCCC-cHHHHHHHHHHHH
Q 008274 533 AARKPYEILIFPDERHMPRRHR-DRIYMEERIWEFI 567 (571)
Q Consensus 533 ~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~i~~fl 567 (571)
..+.++.++++++|.+.... -...+++.+.+++
T Consensus 225 --s~~~kl~~~~g~~H~l~e~~~~~~~~~~~~~~~~ 258 (302)
T d1thta_ 225 --TGHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAA 258 (302)
T ss_dssp --TCCEEEEEETTCCSCTTSSHHHHHHHHHHHHHHH
T ss_pred --CCCceEEEecCCCcccccChHHHHHHHHHHHHHH
Confidence 35789999999999874322 2233455555443
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.91 E-value=3.6e-23 Score=185.89 Aligned_cols=209 Identities=22% Similarity=0.216 Sum_probs=153.3
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
.+.+.++++.++| ++.+.+..|... ...+.+++|++|+.+......+ ......+++.|+++||.|+.+|+||.|.
T Consensus 6 ~~~~~l~i~gp~G-~l~~~~~~p~~~--~~~~~~~~vl~Hph~~~GG~~~--~~~~~~la~~l~~~G~~vlrfd~RG~G~ 80 (218)
T d2fuka1 6 TESAALTLDGPVG-PLDVAVDLPEPD--VAVQPVTAIVCHPLSTEGGSMH--NKVVTMAARALRELGITVVRFNFRSVGT 80 (218)
T ss_dssp SSCEEEEEEETTE-EEEEEEECCCTT--SCCCSEEEEEECSCTTTTCSTT--CHHHHHHHHHHHTTTCEEEEECCTTSTT
T ss_pred CCceEEEEeCCCc-cEEEEEEcCCCC--CCCCCcEEEEECCCCCCCcCCC--ChHHHHHHHHHHHcCCeEEEeecCCCcc
Confidence 4556789999888 688999888653 2245578888985332111011 1123446788999999999999999988
Q ss_pred ChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch
Q 008274 397 RGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF 476 (571)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 476 (571)
+...+.. .....+|+.++++++.++. +..+++++|+||||.+++.++.+. ..+++|+.+|..+...
T Consensus 81 S~g~~~~------~~~~~~D~~a~~~~~~~~~--~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~~---- 146 (218)
T d2fuka1 81 SAGSFDH------GDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD---- 146 (218)
T ss_dssp CCSCCCT------TTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC----
T ss_pred CCCccCc------CcchHHHHHHHHHHHhhcc--cCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccchh----
Confidence 7654321 2234789999999998875 567899999999999999888763 2467788877643110
Q ss_pred hhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcH
Q 008274 477 YTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDR 556 (571)
Q Consensus 477 ~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 556 (571)
. ...++.+|+|+|||++|..+|+++..++++++ ..+.+++++|+++|.|.. ..
T Consensus 147 ------------------~----~~~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~---~~~~~l~~i~ga~H~f~~--~~ 199 (218)
T d2fuka1 147 ------------------F----SDVQPPAQWLVIQGDADEIVDPQAVYDWLETL---EQQPTLVRMPDTSHFFHR--KL 199 (218)
T ss_dssp ------------------C----TTCCCCSSEEEEEETTCSSSCHHHHHHHHTTC---SSCCEEEEETTCCTTCTT--CH
T ss_pred ------------------h----hccccccceeeEecCCCcCcCHHHHHHHHHHc---cCCceEEEeCCCCCCCCC--CH
Confidence 0 01245689999999999999999988887655 456789999999998853 34
Q ss_pred HHHHHHHHHHHHHhC
Q 008274 557 IYMEERIWEFIERTL 571 (571)
Q Consensus 557 ~~~~~~i~~fl~~~l 571 (571)
..+.+.+.+|++++|
T Consensus 200 ~~l~~~~~~~v~~~l 214 (218)
T d2fuka1 200 IDLRGALQHGVRRWL 214 (218)
T ss_dssp HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHhc
Confidence 568899999999886
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.89 E-value=1.5e-22 Score=189.49 Aligned_cols=189 Identities=14% Similarity=0.160 Sum_probs=145.5
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGR 411 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~ 411 (571)
..+.+|.|.+. ..+++|+||++||+.+... .+..+++.|+++||+|+++|++|........
T Consensus 37 ~~~~ly~P~~~--~~g~~P~Vv~~HG~~g~~~-------~~~~~a~~lA~~Gy~V~~~d~~~~~~~~~~~---------- 97 (260)
T d1jfra_ 37 GGGTIYYPTST--ADGTFGAVVISPGFTAYQS-------SIAWLGPRLASQGFVVFTIDTNTTLDQPDSR---------- 97 (260)
T ss_dssp CCEEEEEESCC--TTCCEEEEEEECCTTCCGG-------GTTTHHHHHHTTTCEEEEECCSSTTCCHHHH----------
T ss_pred cCEEEEEcCCC--CCCCccEEEEECCCCCCHH-------HHHHHHHHHHhCCCEEEEEeeCCCcCCchhh----------
Confidence 45778899763 3368999999999876543 2345689999999999999999876554221
Q ss_pred CCchhHHHHHHHHHHc----CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCC
Q 008274 412 IDAEDQLTGAEWLIKQ----GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSE 487 (571)
Q Consensus 412 ~~~~D~~~~~~~l~~~----~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~ 487 (571)
..|+.++++++.+. +.+|.+||+++|||+||.+++.++...+ +++++++.+|....
T Consensus 98 --~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~----------------- 157 (260)
T d1jfra_ 98 --GRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTD----------------- 157 (260)
T ss_dssp --HHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSC-----------------
T ss_pred --HHHHHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhc-cchhheeeeccccc-----------------
Confidence 45678888888875 5689999999999999999999998765 56788887765321
Q ss_pred ChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 488 DPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 488 ~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
....++++|+|++||++|.++|+++..+++......+.+.+++.+++++|++.... ...+.+.+++||
T Consensus 158 -----------~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~-~~~~~~~~~~wl 225 (260)
T d1jfra_ 158 -----------KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTS-DTTIAKYSISWL 225 (260)
T ss_dssp -----------CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSC-CHHHHHHHHHHH
T ss_pred -----------ccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCC-hHHHHHHHHHHH
Confidence 12346778999999999999999775555554545578899999999999874433 355778889999
Q ss_pred HHhC
Q 008274 568 ERTL 571 (571)
Q Consensus 568 ~~~l 571 (571)
+.||
T Consensus 226 ~~~L 229 (260)
T d1jfra_ 226 KRFI 229 (260)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9875
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.88 E-value=2.4e-22 Score=185.00 Aligned_cols=210 Identities=17% Similarity=0.163 Sum_probs=150.6
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.|.|.+++.||..+.+++..|.+ +++|+||++|++.+... ....+++.|+++||.|+++|+.+.+..+
T Consensus 3 ~e~v~~~~~dg~~~~a~~~~P~~-----~~~P~vl~~h~~~G~~~-------~~~~~a~~lA~~Gy~vl~pd~~~~~~~~ 70 (233)
T d1dina_ 3 TEGISIQSYDGHTFGALVGSPAK-----APAPVIVIAQEIFGVNA-------FMRETVSWLVDQGYAAVCPDLYARQAPG 70 (233)
T ss_dssp CTTCCEECTTSCEECEEEECCSS-----SSEEEEEEECCTTBSCH-------HHHHHHHHHHHTTCEEEEECGGGGTSTT
T ss_pred ceEEEEEcCCCCEEEEEEECCCC-----CCceEEEEeCCCCCCCH-------HHHHHHHHHHhcCCcceeeeeccCCCcC
Confidence 46688999999999999999975 58999999997654322 2344588999999999999987654432
Q ss_pred hhh-------HHHH---h-ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCcc
Q 008274 399 LKF-------EASI---K-HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV 467 (571)
Q Consensus 399 ~~~-------~~~~---~-~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~ 467 (571)
... .... . .........|+.++++++.+.+. +..||+++|+|+||.+++.++.. +. +.++++..|.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~-~~~~i~~~G~s~Gg~~a~~~a~~-~~-~~~~~~~~~~ 147 (233)
T d1dina_ 71 TALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPY-SNGKVGLVGYCLGGALAFLVAAK-GY-VDRAVGYYGV 147 (233)
T ss_dssp CBCCTTSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTT-EEEEEEEEEETHHHHHHHHHHHH-TC-SSEEEEESCS
T ss_pred cccChHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCC-CCCceEEEEecccccceeecccc-cc-cceecccccc
Confidence 110 0000 0 00011135678888999887764 56899999999999999998875 33 3455543332
Q ss_pred CCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCC
Q 008274 468 TSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDER 547 (571)
Q Consensus 468 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 547 (571)
.. .+++..+.++++|+|++||++|..+|.++.+.+.++++ .++++++++||+++
T Consensus 148 ~~-------------------------~~~~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~-~~~~~~~~~y~ga~ 201 (233)
T d1dina_ 148 GL-------------------------EKQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFG-ANPLLQVHWYEEAG 201 (233)
T ss_dssp CG-------------------------GGGGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHT-TCTTEEEEEETTCC
T ss_pred cc-------------------------ccchhhhhccCCcceeeecccccCCCHHHHHHHHHHHh-cCCCEEEEEECCCC
Confidence 10 12234566788999999999999999998888877664 57899999999999
Q ss_pred CCCCCC-------CcHHHHHHHHHHHHHH
Q 008274 548 HMPRRH-------RDRIYMEERIWEFIER 569 (571)
Q Consensus 548 H~~~~~-------~~~~~~~~~i~~fl~~ 569 (571)
|+|... ...+..++++++||..
T Consensus 202 HgF~~~~~~~y~~~aa~~a~~r~~~ffa~ 230 (233)
T d1dina_ 202 HSFARTSSSGYVASAAALANERTLDFLAP 230 (233)
T ss_dssp TTTTCTTSTTCCHHHHHHHHHHHHHHHGG
T ss_pred cCCCCCCCccCCHHHHHHHHHHHHHHHHc
Confidence 998421 1234567889999864
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.87 E-value=5.3e-22 Score=196.21 Aligned_cols=247 Identities=16% Similarity=0.191 Sum_probs=166.7
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCc----eeecccccccchhhhHHHHhCCcEEEEECCCCC
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCV----QLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT 394 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~----~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 394 (571)
.+.+.++..||.+|.+.+|.|++. +++|+||..|+.... ......+........+.|+++||+|+.+|.||+
T Consensus 24 ~~~v~i~~rDG~~L~~~v~~P~~~----~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~ 99 (381)
T d1mpxa2 24 KREVMIPMRDGVKLHTVIVLPKGA----KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGK 99 (381)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTC----CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTS
T ss_pred EEEEEEECCCCCEEEEEEEEeCCC----CCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCcc
Confidence 467999999999999999999763 689999999863211 110111111223457889999999999999999
Q ss_pred CCChhhhHHHH-----hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC
Q 008274 395 ARRGLKFEASI-----KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS 469 (571)
Q Consensus 395 ~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~ 469 (571)
|+|++.+.... ....+..++.|..++++|+.+++.++..||+++|+|+||++++++|+..|+.++|+|+.+|+.+
T Consensus 100 g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 100 YGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp TTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred CCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeeccccc
Confidence 99877653221 1223344678999999999999878999999999999999999999999999999999999887
Q ss_pred cccccchh-------------hhhh--cCCCC-----------------------------------------CChhhhc
Q 008274 470 WDGYDTFY-------------TEKY--MGLPS-----------------------------------------EDPVGYE 493 (571)
Q Consensus 470 ~~~~~~~~-------------~~~~--~g~~~-----------------------------------------~~~~~~~ 493 (571)
+..+...+ .... .+.+. ...+.+.
T Consensus 180 ~~~~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~w~ 259 (381)
T d1mpxa2 180 GWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQ 259 (381)
T ss_dssp TTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSSCHHHH
T ss_pred cccccccccCchhhhccHHHHHhhhhhccccchhhhhhhhhHHHHHhcccccccchhhccccchHHHHHhhCCCccchhh
Confidence 53221100 0000 00000 0012223
Q ss_pred cCCcchh--hccCCCcEEEEecCCCCCCChHHHHHHHHHHHH---cCCCeeEEEcCCCCCCC-------------CCCCc
Q 008274 494 YSSVMHH--VHKMKGKLLLVHGMIDENVHFRHTARLINALVA---ARKPYEILIFPDERHMP-------------RRHRD 555 (571)
Q Consensus 494 ~~s~~~~--~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~---~~~~~~~~~~~~~~H~~-------------~~~~~ 555 (571)
..++... ..++++|+|+++|..|...... +...++.++. .+.+.++++-|. +|.- .....
T Consensus 260 ~~s~~~~~~~~~i~vP~l~i~G~~d~~~~~~-~~~~~~~~~~~~~~~~~~~LviGPw-~H~~~~~~~~~~~~~~~~~~~~ 337 (381)
T d1mpxa2 260 EQALDKVMARTPLKVPTMWLQGLWDQEDMWG-AIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSALGALNFEGDTA 337 (381)
T ss_dssp TTCHHHHHHTSCCCSCEEEEEETTCSSCSSH-HHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEETTEECSSCHH
T ss_pred hcCchhhhhhccccCceEEEeccccCCcccc-HHHHHHHHHHhccccCCceEEEecC-cCCCCccCCCcCCccccccchh
Confidence 3344333 3457899999999999876544 3444444433 346888988887 6742 11122
Q ss_pred HHHHHHHHHHHHHHhC
Q 008274 556 RIYMEERIWEFIERTL 571 (571)
Q Consensus 556 ~~~~~~~i~~fl~~~l 571 (571)
.....+.+++||++||
T Consensus 338 ~~~~~~~~l~wFD~~L 353 (381)
T d1mpxa2 338 RQFRHDVLRPFFDQYL 353 (381)
T ss_dssp HHHHHHTHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHh
Confidence 3344566789999886
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.87 E-value=6.6e-22 Score=194.02 Aligned_cols=235 Identities=17% Similarity=0.177 Sum_probs=169.4
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.+.+.++..||.+|.+.+|.|+.. +++|+||+.||....... .+ ......++.|+++||+|+.+|.||+|+|+
T Consensus 5 ~~~v~ipmrDGv~L~~~vy~P~~~----~~~P~il~~~pyg~~~~~--~~-~~~~~~~~~~a~~GY~vv~~d~RG~g~S~ 77 (347)
T d1ju3a2 5 ASNVMVPMRDGVRLAVDLYRPDAD----GPVPVLLVRNPYDKFDVF--AW-STQSTNWLEFVRDGYAVVIQDTRGLFASE 77 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEEECCS----SCEEEEEEEESSCTTCCH--HH-HTTSCCTHHHHHTTCEEEEEECTTSTTCC
T ss_pred EeCeEEECCCCCEEEEEEEEcCCC----CCEEEEEEEcCCCCcccc--Cc-CcccHHHHHHHHCCCEEEEEeeCCccccC
Confidence 366899999999999999999763 689999999984322111 11 11223468899999999999999999998
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc---
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT--- 475 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~--- 475 (571)
..+.. ......|..++++++.++++.| .||+++|+|+||++++++|+..|..++|++...+..++.....
T Consensus 78 G~~~~------~~~~~~d~~d~i~w~~~q~~~~-grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~~~~~~~~~ 150 (347)
T d1ju3a2 78 GEFVP------HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGP 150 (347)
T ss_dssp SCCCT------TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCSCT
T ss_pred Ccccc------ccchhhhHHHHHHHHHhhccCC-cceEeeeccccccchhhhhhcccccceeeeeccccchhhhhhhhhc
Confidence 76532 2223578899999999999877 6999999999999999999999999999999888876421000
Q ss_pred ----------hhhhh--------------------------------hc----------------------CCCCCChhh
Q 008274 476 ----------FYTEK--------------------------------YM----------------------GLPSEDPVG 491 (571)
Q Consensus 476 ----------~~~~~--------------------------------~~----------------------g~~~~~~~~ 491 (571)
.+... .. .......+.
T Consensus 151 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (347)
T d1ju3a2 151 GGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDNDES 230 (347)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHTTSSSCCTTHHHHHHHHHHHHHCHHHHHTCSSTTCCTTHHHHCTHHHHTTTTCCSCCHH
T ss_pred CCccchhhHHHHHHHhhccccccccccCcchhhHHhhhhhhcccchhhhccCccccccccccchhhHHHHhhhcccchhh
Confidence 00000 00 000011234
Q ss_pred hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC------------CCCCcHHHH
Q 008274 492 YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP------------RRHRDRIYM 559 (571)
Q Consensus 492 ~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~------------~~~~~~~~~ 559 (571)
|...++...+.++++|+|+++|..|..+ ..+.+++++++. +.+.++++-|. +|.. .......+.
T Consensus 231 w~~~~~~~~~~~i~vP~L~i~G~~D~~~--~~~~~~~~~~~~-~~~~~liigpw-~H~~~~~~~~~~~~g~~~~~~~~~~ 306 (347)
T d1ju3a2 231 WQSISLFERLGGLATPALITAGWYDGFV--GESLRTFVAVKD-NADARLVVGPW-SHSNLTGRNADRKFGIAATYPIQEA 306 (347)
T ss_dssp HHTTCCHHHHTTCCCCEEEEEEEECTTH--HHHHHHHHHHTT-TSCEEEEEEEE-ESSCCSSEETTEECCGGGSCCHHHH
T ss_pred hhcCCHHHHhhcCCCCEEEeccccCCCc--chhHHHHHHhhc-cCCceEEEcCc-cccCcccccCCCCCCccccccHHHH
Confidence 5556788889999999999999999764 356777777754 56788888776 5542 112235667
Q ss_pred HHHHHHHHHHhC
Q 008274 560 EERIWEFIERTL 571 (571)
Q Consensus 560 ~~~i~~fl~~~l 571 (571)
....++||+++|
T Consensus 307 ~~~~l~wfD~~L 318 (347)
T d1ju3a2 307 TTMHKAFFDRHL 318 (347)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 788899999987
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.87 E-value=2.5e-21 Score=180.21 Aligned_cols=196 Identities=17% Similarity=0.094 Sum_probs=148.6
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh
Q 008274 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF 401 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~ 401 (571)
+.+.-.++..-...+|.|++ ++.|+||++|||++...... .+...++.|+++||+|+.+|||..+....
T Consensus 40 ~dv~Yg~~~~~~lDiy~P~~-----~~~P~vv~iHGG~w~~g~~~----~~~~~a~~l~~~G~~Vv~~~YRl~p~~~~-- 108 (261)
T d2pbla1 40 LNLSYGEGDRHKFDLFLPEG-----TPVGLFVFVHGGYWMAFDKS----SWSHLAVGALSKGWAVAMPSYELCPEVRI-- 108 (261)
T ss_dssp EEEESSSSTTCEEEEECCSS-----SCSEEEEEECCSTTTSCCGG----GCGGGGHHHHHTTEEEEEECCCCTTTSCH--
T ss_pred CCcCCCCCcCeEEEEeccCC-----CCCCeEEEECCCCCccCChh----HhhhHHHHHhcCCceeecccccccccccC--
Confidence 44444344344556788875 46799999999986543222 23456889999999999999997654331
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC------CeeEEEEEcCccCCcccccc
Q 008274 402 EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP------DVFQCAVSGAPVTSWDGYDT 475 (571)
Q Consensus 402 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~------~~~~~~v~~~~~~~~~~~~~ 475 (571)
. . .++|+.++++++.++. ++||+|+|||+||+++++++.... ..+++++..+|+.++.....
T Consensus 109 p-~--------~~~d~~~a~~~~~~~~---~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (261)
T d2pbla1 109 S-E--------ITQQISQAVTAAAKEI---DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR 176 (261)
T ss_dssp H-H--------HHHHHHHHHHHHHHHS---CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG
T ss_pred c-h--------hHHHHHHHHHHHHhcc---cCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhh
Confidence 1 1 1688999999998874 479999999999999988776532 35789999999988765443
Q ss_pred hhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCC
Q 008274 476 FYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548 (571)
Q Consensus 476 ~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 548 (571)
.+....++ .+.+.+...||+.++.+..+|+||+||+.|..++..++..++++|+ ++.+++|+.+|
T Consensus 177 ~~~~~~~~---~~~~~~~~~SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l~-----~~~~~~~~~~H 241 (261)
T d2pbla1 177 TSMNEKFK---MDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-----ADHVIAFEKHH 241 (261)
T ss_dssp STTHHHHC---CCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-----CEEEEETTCCT
T ss_pred hhhccccc---CCHHHHHHhCchhhcccCCCeEEEEEecCCCchHHHHHHHHHHHhC-----CCceEeCCCCc
Confidence 33333333 2467778889999999999999999999999999999999999883 56788999999
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.87 E-value=9.8e-22 Score=181.85 Aligned_cols=212 Identities=13% Similarity=-0.017 Sum_probs=136.3
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH--------H
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE--------A 403 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~--------~ 403 (571)
+......|. ++.|+||++||.+++.. .+..+++.|+++||.|+++|+||+|.+..... .
T Consensus 13 ~~~~~~~p~------~~~~~vl~lHG~~~~~~-------~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~ 79 (238)
T d1ufoa_ 13 LSVLARIPE------APKALLLALHGLQGSKE-------HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVE 79 (238)
T ss_dssp EEEEEEEES------SCCEEEEEECCTTCCHH-------HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHH
T ss_pred EEEEecCCC------CCCeEEEEeCCCCCCHH-------HHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhh
Confidence 445555664 35699999999877643 23445788899999999999999886642211 1
Q ss_pred HHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcC
Q 008274 404 SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMG 483 (571)
Q Consensus 404 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g 483 (571)
..... ...++.++...+...+.++..+++++|+|+||.+++.+++.+|+...++... +.......... ..
T Consensus 80 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~-~~~~~~~~~~~-----~~ 149 (238)
T d1ufoa_ 80 EVYRV----ALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFI-GSGFPMKLPQG-----QV 149 (238)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEES-CCSSCCCCCTT-----CC
T ss_pred hhhhh----HHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcchhheeeee-eeccccccccc-----cc
Confidence 11000 0112222333333345567889999999999999999999888765444443 33222111000 00
Q ss_pred CCCCChhhhccCCcchhhcc-CCCcEEEEecCCCCCCChHHHHHHHHHHHHcCC--CeeEEEcCCCCCCCCCCCcHHHHH
Q 008274 484 LPSEDPVGYEYSSVMHHVHK-MKGKLLLVHGMIDENVHFRHTARLINALVAARK--PYEILIFPDERHMPRRHRDRIYME 560 (571)
Q Consensus 484 ~~~~~~~~~~~~s~~~~~~~-~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~ 560 (571)
............++.....+ .++|+|++||+.|..|+++++.+++++|++.+. ++++..++++||.+. ....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~-----~~~~ 224 (238)
T d1ufoa_ 150 VEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLT-----PLMA 224 (238)
T ss_dssp CCCHHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCC-----HHHH
T ss_pred cccccccchhhhhhhhhhhhhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccC-----HHHH
Confidence 00011122233444444444 357999999999999999999999999998875 578888999999873 2234
Q ss_pred HHHHHHHHHhC
Q 008274 561 ERIWEFIERTL 571 (571)
Q Consensus 561 ~~i~~fl~~~l 571 (571)
+.+.+||.++|
T Consensus 225 ~~~~~f~~~~l 235 (238)
T d1ufoa_ 225 RVGLAFLEHWL 235 (238)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 56677777764
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.86 E-value=1.1e-20 Score=182.65 Aligned_cols=234 Identities=17% Similarity=0.085 Sum_probs=151.0
Q ss_pred CCeEEEEEcCCCc-EEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCCC
Q 008274 318 PPDIVQIQANDGT-VLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGTA 395 (571)
Q Consensus 318 ~~~~~~~~~~dg~-~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~ 395 (571)
..+.+.+++.+|. .+.+++|.|++. +++.|+||++|||+....... .....+..++ +.||+|+.+|||...
T Consensus 49 ~~~~~~~~~~~g~~~i~~~~~~P~~~---~~~~Pvvv~iHGGG~~~g~~~----~~~~~~~~la~~~G~~V~~vdYrl~p 121 (317)
T d1lzla_ 49 SLRELSAPGLDGDPEVKIRFVTPDNT---AGPVPVLLWIHGGGFAIGTAE----SSDPFCVEVARELGFAVANVEYRLAP 121 (317)
T ss_dssp EEEEEEECCSTTCCCEEEEEEEESSC---CSCEEEEEEECCSTTTSCCGG----GGHHHHHHHHHHHCCEEEEECCCCTT
T ss_pred eEEEEEEecCCCCceEEEEEECCCCC---CCCCcEEEEecCccccccccc----ccchHHHhHHhhcCCccccccccccc
Confidence 4577888888874 699999999863 257899999999976433221 1233345555 569999999999765
Q ss_pred CChhhhHHHHhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCCC----eeEEEEEcCccC
Q 008274 396 RRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFPD----VFQCAVSGAPVT 468 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~~----~~~~~v~~~~~~ 468 (571)
.... . ..++|+.++++++.+. ..+|++||+|+|+|+||++++.++.+.++ .....+...+..
T Consensus 122 e~~~--~---------~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (317)
T d1lzla_ 122 ETTF--P---------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPEL 190 (317)
T ss_dssp TSCT--T---------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCC
T ss_pred cccc--c---------ccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhcccccccccccccccc
Confidence 4321 1 1157788888888664 45799999999999999999988865221 112222222221
Q ss_pred Ccccc----------------c-chhhhhhcCC---CCCChhhhccCCcchhhcc-CCCcEEEEecCCCCCCChHHHHHH
Q 008274 469 SWDGY----------------D-TFYTEKYMGL---PSEDPVGYEYSSVMHHVHK-MKGKLLLVHGMIDENVHFRHTARL 527 (571)
Q Consensus 469 ~~~~~----------------~-~~~~~~~~g~---~~~~~~~~~~~s~~~~~~~-~~~p~lli~G~~D~~v~~~~~~~~ 527 (571)
+.... . ......+.+. ...++......++...... ..+|+|+++|+.|.. ..++..|
T Consensus 191 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~li~~g~~D~l--~~~~~~~ 268 (317)
T d1lzla_ 191 DDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPL--RDEGIEY 268 (317)
T ss_dssp CTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCTT--HHHHHHH
T ss_pred cccccccccccccccchhhhhhhHHHHhhhccccccCCCCchhccccCchhhhhccCCCCeEEEECCCCCC--HHHHHHH
Confidence 11000 0 0000111111 1111222222233222222 237999999999954 5689999
Q ss_pred HHHHHHcCCCeeEEEcCCCCCCCCC---CCcHHHHHHHHHHHHHHhC
Q 008274 528 INALVAARKPYEILIFPDERHMPRR---HRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 528 ~~~l~~~~~~~~~~~~~~~~H~~~~---~~~~~~~~~~i~~fl~~~l 571 (571)
+++|+++|+++++++||+++|+|.. ........+++++||.++|
T Consensus 269 ~~~L~~~G~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~l~r~L 315 (317)
T d1lzla_ 269 ALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGL 315 (317)
T ss_dssp HHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCEEEEEECcCccCCcccCCchHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998732 2334556678899999886
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.85 E-value=1.4e-20 Score=180.94 Aligned_cols=229 Identities=17% Similarity=0.091 Sum_probs=157.4
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHH-HhCCcEEEEECCCCC
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYL-RSKGILVWKLDNRGT 394 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~rG~ 394 (571)
...++.+.++..+| .+.+.+|.|+. +.|+||++|||+....... .+..++..+ ++.|+.|+.+|||.+
T Consensus 53 ~~~~~~~~i~~~~g-~i~~~iy~P~~------~~P~il~iHGGg~~~g~~~----~~~~~~~~l~~~~g~~Vv~v~Yrla 121 (311)
T d1jjia_ 53 VERVEDRTIKGRNG-DIRVRVYQQKP------DSPVLVYYHGGGFVICSIE----SHDALCRRIARLSNSTVVSVDYRLA 121 (311)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEESSS------SEEEEEEECCSTTTSCCTG----GGHHHHHHHHHHHTSEEEEEECCCT
T ss_pred cceEEEEEEeCCCC-cEEEEEEcCCC------CceEEEEEcCCCCccCChh----hhhhhhhhhhhcCCcEEEEeccccc
Confidence 34566788888777 69999999963 4599999999976543221 223344555 457999999999977
Q ss_pred CCChhhhHHHHhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc----CCCeeEEEEEcCcc
Q 008274 395 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR----FPDVFQCAVSGAPV 467 (571)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~----~~~~~~~~v~~~~~ 467 (571)
.+..- . ..++|+.++++++.++ ..+|++||+|+|+|+||++++.++.. ......+.++..|+
T Consensus 122 p~~~~--p---------~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~ 190 (311)
T d1jjia_ 122 PEHKF--P---------AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPV 190 (311)
T ss_dssp TTSCT--T---------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCC
T ss_pred ccccc--c---------hhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecce
Confidence 54321 1 1267888888888775 46899999999999999999877643 23456788888888
Q ss_pred CCcccccchhhhhhcCC----------------CCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHH
Q 008274 468 TSWDGYDTFYTEKYMGL----------------PSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINAL 531 (571)
Q Consensus 468 ~~~~~~~~~~~~~~~g~----------------~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l 531 (571)
.++........+..-+. +..........+|+....+-.+|++|++|+.|..+ .++..++++|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~l~--d~~~~~~~~L 268 (311)
T d1jjia_ 191 VNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYDPLR--DEGEVFGQML 268 (311)
T ss_dssp CCSSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEEECTTH--HHHHHHHHHH
T ss_pred eeeccCcccccccccccccccHHHhhhhhhhcccccccccccccchhhcccccCCCEEEEEcCCCCCh--HHHHHHHHHH
Confidence 77543221111100000 00011111224565544444579999999999654 5889999999
Q ss_pred HHcCCCeeEEEcCCCCCCCCC----CCcHHHHHHHHHHHHH
Q 008274 532 VAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIE 568 (571)
Q Consensus 532 ~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~ 568 (571)
+++|+++++++|++++|+|.. ....++..+++.+||-
T Consensus 269 ~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl~ 309 (311)
T d1jjia_ 269 RRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLV 309 (311)
T ss_dssp HHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHhC
Confidence 999999999999999998732 2335667788888873
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=1.8e-21 Score=175.39 Aligned_cols=197 Identities=17% Similarity=0.097 Sum_probs=138.0
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
++.. +|..+.+..+.|... ...|.||++||.+++.. .|.. ...+..|+++||.|+++|+||+|.+.....
T Consensus 10 ~i~v-~G~~i~y~~~~~~~~----~~~~~vvllHG~~~~~~---~w~~--~~~~~~la~~gy~via~D~~G~G~S~~~~~ 79 (208)
T d1imja_ 10 TIQV-QGQALFFREALPGSG----QARFSVLLLHGIRFSSE---TWQN--LGTLHRLAQAGYRAVAIDLPGLGHSKEAAA 79 (208)
T ss_dssp CEEE-TTEEECEEEEECSSS----CCSCEEEECCCTTCCHH---HHHH--HTHHHHHHHTTCEEEEECCTTSGGGTTSCC
T ss_pred EEEE-CCEEEEEEEecCCCC----CCCCeEEEECCCCCChh---HHhh--hHHHHHHHHcCCeEEEeecccccCCCCCCc
Confidence 3443 788898888888543 35577888999876643 2311 113578999999999999999987643211
Q ss_pred HHHhccCCCC-CchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhh
Q 008274 403 ASIKHNCGRI-DAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKY 481 (571)
Q Consensus 403 ~~~~~~~~~~-~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 481 (571)
....... ..+++.+.++.+ +.+++.|+||||||.+++.++.++|++++++|+.+|+..- .
T Consensus 80 ---~~~~~~~~~~~~l~~~~~~l------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~---------~- 140 (208)
T d1imja_ 80 ---PAPIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD---------K- 140 (208)
T ss_dssp ---SSCTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG---------G-
T ss_pred ---ccccchhhhhhhhhhccccc------ccccccccccCcHHHHHHHHHHHhhhhcceeeecCccccc---------c-
Confidence 1111111 123344444443 4578999999999999999999999999999998875321 0
Q ss_pred cCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHH
Q 008274 482 MGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEE 561 (571)
Q Consensus 482 ~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 561 (571)
-......++++|+|+++|++|..+|... +. + +.-.+.++.+++++||.. ..++.+.+.+
T Consensus 141 --------------~~~~~~~~i~~P~Lii~G~~D~~~~~~~--~~---~-~~~~~~~~~~i~~~gH~~-~~~~p~~~~~ 199 (208)
T d1imja_ 141 --------------INAANYASVKTPALIVYGDQDPMGQTSF--EH---L-KQLPNHRVLIMKGAGHPC-YLDKPEEWHT 199 (208)
T ss_dssp --------------SCHHHHHTCCSCEEEEEETTCHHHHHHH--HH---H-TTSSSEEEEEETTCCTTH-HHHCHHHHHH
T ss_pred --------------cccccccccccccccccCCcCcCCcHHH--HH---H-HhCCCCeEEEECCCCCch-hhhCHHHHHH
Confidence 0113456789999999999998876442 22 2 234678999999999975 3466788999
Q ss_pred HHHHHHHH
Q 008274 562 RIWEFIER 569 (571)
Q Consensus 562 ~i~~fl~~ 569 (571)
.+.+||++
T Consensus 200 ~l~~Fl~~ 207 (208)
T d1imja_ 200 GLLDFLQG 207 (208)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99999975
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.85 E-value=1.6e-20 Score=183.99 Aligned_cols=238 Identities=16% Similarity=0.089 Sum_probs=159.5
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+...+++.||..|.+.+|.|++.. ++.|+||++|||++...... ...+...++.++++|++|+++|||...+.
T Consensus 78 ~~~~~~i~~~dg~~i~~~iy~P~~~~---~~~Pviv~~HGGG~~~gs~~--~~~~~~~~~~la~~g~~VvsvdYRla~~~ 152 (358)
T d1jkma_ 78 ETSTETILGVDGNEITLHVFRPAGVE---GVLPGLVYTHGGGMTILTTD--NRVHRRWCTDLAAAGSVVVMVDFRNAWTA 152 (358)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCC---SCEEEEEEECCSTTTSSCSS--SHHHHHHHHHHHHTTCEEEEEECCCSEET
T ss_pred cEEEEEEeCCCCCEEEEEEEecCCCC---CCCCeEEEecCCeeeecccc--ccccchHHHHHHhhhheeeeeeecccccc
Confidence 45667888889999999999998742 57899999999976532111 11234567888999999999999986432
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCCcCCcEEEEeechHHHHHHHHHhc-----CCCeeEEEEEcCccCCcc
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLAKVGHIGLYGWSYGGYLSAITLAR-----FPDVFQCAVSGAPVTSWD 471 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~~~~-----~~~~~~~~v~~~~~~~~~ 471 (571)
..+ +.....++|+.++++|+.++ ...|.+||+|+|+|+||++++.++.. ....+.+.+...|+.+..
T Consensus 153 ~pe-------~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~ 225 (358)
T d1jkma_ 153 EGH-------HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGG 225 (358)
T ss_dssp TEE-------CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCC
T ss_pred ccc-------CCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceeccc
Confidence 211 11112378999999999876 33578899999999999999877643 234567778877776532
Q ss_pred cccc-------------------------hhhhhhcCCCC--CChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHH
Q 008274 472 GYDT-------------------------FYTEKYMGLPS--EDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHT 524 (571)
Q Consensus 472 ~~~~-------------------------~~~~~~~g~~~--~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~ 524 (571)
.... .+...+.+... .++..+....+.... +--+|+||++|+.|..+ .++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~-~~lPp~li~~g~~D~l~--~e~ 302 (358)
T d1jkma_ 226 YAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDEL-RGLPPFVVAVNELDPLR--DEG 302 (358)
T ss_dssp TTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHH-TTCCCEEEEEETTCTTH--HHH
T ss_pred cCccchhhcccccchhcccccccchhhhhhHHhhcCCccCCccCccccccccchhhc-cCCCCEEEEECCCCCCH--HHH
Confidence 1100 00111111110 111111111110111 12259999999999654 688
Q ss_pred HHHHHHHHHcCCCeeEEEcCCCCCCCC------CCCcHHHHHHHHHHHHHHh
Q 008274 525 ARLINALVAARKPYEILIFPDERHMPR------RHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 525 ~~~~~~l~~~~~~~~~~~~~~~~H~~~------~~~~~~~~~~~i~~fl~~~ 570 (571)
..++++|+++|+++++++|++++|+|. .++..+...+.|..|+..+
T Consensus 303 ~~~~~~L~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~ 354 (358)
T d1jkma_ 303 IAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 354 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999861 1234556778888998654
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.85 E-value=3.5e-20 Score=177.08 Aligned_cols=217 Identities=17% Similarity=0.171 Sum_probs=146.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|.+|++..+.++ ..|.||++||.+.+.. .|. ..+++.|.++||.|+++|+||+|.+......
T Consensus 8 g~~~i~y~~~G~~-------~~p~vvl~HG~~~~~~---~~~---~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~---- 70 (297)
T d1q0ra_ 8 GDVELWSDDFGDP-------ADPALLLVMGGNLSAL---GWP---DEFARRLADGGLHVIRYDHRDTGRSTTRDFA---- 70 (297)
T ss_dssp TTEEEEEEEESCT-------TSCEEEEECCTTCCGG---GSC---HHHHHHHHTTTCEEEEECCTTSTTSCCCCTT----
T ss_pred CCEEEEEEEecCC-------CCCEEEEECCCCcChh---HHH---HHHHHHHHhCCCEEEEEeCCCCccccccccc----
Confidence 6678888877543 2378889999876543 332 3356788999999999999999987532111
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc-------------
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD------------- 474 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~------------- 474 (571)
.....+.|+.+.+..+.+.- +.+++.++|||+||.+++.++.++|++++++++.++........
T Consensus 71 -~~~~~~~~~~~d~~~ll~~l--~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 147 (297)
T d1q0ra_ 71 -AHPYGFGELAADAVAVLDGW--GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTL 147 (297)
T ss_dssp -TSCCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCS
T ss_pred -ccccccchhhhhhccccccc--cccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhh
Confidence 11123556555555555442 45689999999999999999999999999999876654211000
Q ss_pred -------chh------------------hh-----hhc-C--CCCCCh---------------------hhh----ccCC
Q 008274 475 -------TFY------------------TE-----KYM-G--LPSEDP---------------------VGY----EYSS 496 (571)
Q Consensus 475 -------~~~------------------~~-----~~~-g--~~~~~~---------------------~~~----~~~s 496 (571)
..+ .. ..+ + .+.... ..+ ...+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (297)
T d1q0ra_ 148 DGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPS 227 (297)
T ss_dssp SCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGG
T ss_pred hhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhcccc
Confidence 000 00 000 0 000000 000 0112
Q ss_pred cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 497 VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 497 ~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
....++++++|+|+++|++|..+++..++.+.+.+ .+.+++++|++||.+ ..+....+.+.|++||++
T Consensus 228 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~gH~~-~~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 228 RAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI----PTARLAEIPGMGHAL-PSSVHGPLAEVILAHTRS 295 (297)
T ss_dssp GGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS----TTEEEEEETTCCSSC-CGGGHHHHHHHHHHHHHH
T ss_pred chhhhhccCCceEEEEeCCCCCCCHHHHHHHHHhC----CCCEEEEECCCCCcc-hhhCHHHHHHHHHHHHHh
Confidence 23456788999999999999999999887776654 578999999999987 557788899999999986
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.85 E-value=2.5e-20 Score=185.62 Aligned_cols=190 Identities=18% Similarity=0.205 Sum_probs=142.9
Q ss_pred hhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCC--------------cCCcEEEEee
Q 008274 375 RAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA--------------KVGHIGLYGW 440 (571)
Q Consensus 375 ~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~--------------d~~~i~l~G~ 440 (571)
..++++.+||+||.+|.||+++|++.+... +..+.+|..++|+|+.++... ...||+++|+
T Consensus 128 ~~~~~~~~GYavv~~D~RG~g~S~G~~~~~-----~~~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~ 202 (405)
T d1lnsa3 128 LNDYFLTRGFASIYVAGVGTRSSDGFQTSG-----DYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGK 202 (405)
T ss_dssp HHHHHHTTTCEEEEECCTTSTTSCSCCCTT-----SHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEE
T ss_pred chHHHHhCCCEEEEECCCCCCCCCCccccC-----ChhhhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEec
Confidence 357899999999999999999998765422 222467899999999864322 3458999999
Q ss_pred chHHHHHHHHHhcCCCeeEEEEEcCccCCccccc----------chh---------------------------------
Q 008274 441 SYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD----------TFY--------------------------------- 477 (571)
Q Consensus 441 S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~----------~~~--------------------------------- 477 (571)
||||++++.+|+..|..++|++..+++.++.... ..+
T Consensus 203 SY~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (405)
T d1lnsa3 203 SYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLA 282 (405)
T ss_dssp THHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCccceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccccccccccchhhhchhhhhhccc
Confidence 9999999999999999999999999988752100 000
Q ss_pred --hhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCc
Q 008274 478 --TEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRD 555 (571)
Q Consensus 478 --~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 555 (571)
............+.+.+.++...+++|++|+|+++|..|..+++.++.+++++|+ .+.+.++++.|. +|.......
T Consensus 283 ~~~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~-~~~~~~Lilgpw-~H~~~~~~~ 360 (405)
T d1lnsa3 283 EMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALP-EGHAKHAFLHRG-AHIYMNSWQ 360 (405)
T ss_dssp HHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSC-TTCCEEEEEESC-SSCCCTTBS
T ss_pred hhhhhhhhccccchhhhhhcChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHHHH-hCCCcEEEEeCC-CCCCCcccc
Confidence 0000112222335677788999999999999999999999999999999999885 356788888876 886533333
Q ss_pred HHHHHHHHHHHHHHhC
Q 008274 556 RIYMEERIWEFIERTL 571 (571)
Q Consensus 556 ~~~~~~~i~~fl~~~l 571 (571)
..++.+.+++||+++|
T Consensus 361 ~~d~~~~~~~wFD~~L 376 (405)
T d1lnsa3 361 SIDFSETINAYFVAKL 376 (405)
T ss_dssp SCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHh
Confidence 4456778899999886
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.84 E-value=9.3e-21 Score=170.42 Aligned_cols=191 Identities=14% Similarity=0.082 Sum_probs=137.5
Q ss_pred EEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCC---
Q 008274 335 ALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGR--- 411 (571)
Q Consensus 335 ~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~--- 411 (571)
.++.|... +++|+||++||.+++.. .+..+++.++ .++.|++++.+........+... ...+.
T Consensus 4 ~i~~~~~~----~~~P~vi~lHG~g~~~~-------~~~~~~~~l~-~~~~vv~p~~~~~~~~~~~~~~~--~~~~~~~~ 69 (202)
T d2h1ia1 4 HVFQKGKD----TSKPVLLLLHGTGGNEL-------DLLPLAEIVD-SEASVLSVRGNVLENGMPRFFRR--LAEGIFDE 69 (202)
T ss_dssp EEEECCSC----TTSCEEEEECCTTCCTT-------TTHHHHHHHH-TTSCEEEECCSEEETTEEESSCE--EETTEECH
T ss_pred ccCCCCCC----CCCCEEEEECCCCCCHH-------HHHHHHHHhc-cCCceeeecccccCCCCcccccc--CCCCCCch
Confidence 35667542 56799999999765432 2344566665 58889998764322111100000 00000
Q ss_pred ----CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCC
Q 008274 412 ----IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSE 487 (571)
Q Consensus 412 ----~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~ 487 (571)
...+++...+..+.++..+|.+|++++|+|+||.+++.+++++|+.+.++++.+|.....
T Consensus 70 ~~~~~~~~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~---------------- 133 (202)
T d2h1ia1 70 EDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRR---------------- 133 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCS----------------
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCcc----------------
Confidence 013456777777777778899999999999999999999999999999999988764310
Q ss_pred ChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHH
Q 008274 488 DPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 488 ~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 567 (571)
+.........|++++||++|++||++.+++++++|++.+.+++++.||+ ||.+. .+..+.+.+||
T Consensus 134 ---------~~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~g-gH~~~-----~~~~~~~~~wl 198 (202)
T d2h1ia1 134 ---------GMQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWENR-GHQLT-----MGEVEKAKEWY 198 (202)
T ss_dssp ---------SCCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESS-TTSCC-----HHHHHHHHHHH
T ss_pred ---------cccccccccchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEECC-CCcCC-----HHHHHHHHHHH
Confidence 0111233457999999999999999999999999999999999999996 89873 34567899999
Q ss_pred HHh
Q 008274 568 ERT 570 (571)
Q Consensus 568 ~~~ 570 (571)
++.
T Consensus 199 ~k~ 201 (202)
T d2h1ia1 199 DKA 201 (202)
T ss_dssp HHH
T ss_pred HHh
Confidence 875
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.84 E-value=8.2e-21 Score=180.30 Aligned_cols=218 Identities=20% Similarity=0.230 Sum_probs=140.4
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.+|.++++..+..+. ..|+||++||+++... .| ......++++||.|+++|+||+|.+......
T Consensus 9 ~~g~~i~y~~~g~~~------~~~~iv~lHG~~g~~~---~~----~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~--- 72 (290)
T d1mtza_ 9 VNGIYIYYKLCKAPE------EKAKLMTMHGGPGMSH---DY----LLSLRDMTKEGITVLFYDQFGCGRSEEPDQS--- 72 (290)
T ss_dssp ETTEEEEEEEECCSS------CSEEEEEECCTTTCCS---GG----GGGGGGGGGGTEEEEEECCTTSTTSCCCCGG---
T ss_pred ECCEEEEEEEcCCCC------CCCeEEEECCCCCchH---HH----HHHHHHHHHCCCEEEEEeCCCCccccccccc---
Confidence 388889887776432 3488999999877643 22 2234567788999999999999987532110
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc------------
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD------------ 474 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~------------ 474 (571)
...+++..+.+..+.++- ...+++.++||||||.+++.++.++|+++++++..+++.......
T Consensus 73 ----~~~~~~~~~~l~~ll~~l-~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 147 (290)
T d1mtza_ 73 ----KFTIDYGVEEAEALRSKL-FGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPA 147 (290)
T ss_dssp ----GCSHHHHHHHHHHHHHHH-HTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCH
T ss_pred ----cccccchhhhhhhhhccc-ccccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhhhhhhH
Confidence 111333333333333220 023589999999999999999999999999999888765321000
Q ss_pred -----------------chh--------hhhhcCCCCCCh---------------------------hhhccCCcchhhc
Q 008274 475 -----------------TFY--------TEKYMGLPSEDP---------------------------VGYEYSSVMHHVH 502 (571)
Q Consensus 475 -----------------~~~--------~~~~~g~~~~~~---------------------------~~~~~~s~~~~~~ 502 (571)
..+ ............ ......+......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (290)
T d1mtza_ 148 KYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKIS 227 (290)
T ss_dssp HHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGG
T ss_pred HHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhh
Confidence 000 000000000000 0011122334567
Q ss_pred cCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 503 KMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 503 ~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
++++|+|+++|++|..+| ..+..+.+.+ .+.++++++++||.+ ..++.+.+.+.|.+||++||
T Consensus 228 ~i~~P~l~i~G~~D~~~~-~~~~~~~~~~----~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~FL~~h~ 290 (290)
T d1mtza_ 228 AIKIPTLITVGEYDEVTP-NVARVIHEKI----AGSELHVFRDCSHLT-MWEDREGYNKLLSDFILKHL 290 (290)
T ss_dssp GCCSCEEEEEETTCSSCH-HHHHHHHHHS----TTCEEEEETTCCSCH-HHHSHHHHHHHHHHHHHTCC
T ss_pred cccceEEEEEeCCCCCCH-HHHHHHHHHC----CCCEEEEECCCCCch-HHhCHHHHHHHHHHHHHHhC
Confidence 788999999999998764 5555555544 567899999999987 34567889999999999986
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.84 E-value=1.1e-20 Score=173.86 Aligned_cols=204 Identities=17% Similarity=0.172 Sum_probs=132.7
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
+.||++||.+++.. .|..+++.|+++||.|+++|+||+|.+........... ...++..++..+...
T Consensus 12 ~~vvliHG~~~~~~-------~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~----~~~~~~~~~~~~~~~-- 78 (242)
T d1tqha_ 12 RAVLLLHGFTGNSA-------DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDD----WWQDVMNGYEFLKNK-- 78 (242)
T ss_dssp CEEEEECCTTCCTH-------HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHH----HHHHHHHHHHHHHHH--
T ss_pred CeEEEECCCCCCHH-------HHHHHHHHHHHCCCEEEEEeCCCCccccccccccchhH----HHHHHHHHHhhhhhc--
Confidence 56778999776543 35667899999999999999999997764322111111 123344444444433
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-----cc---hhhh--------------hhcCCCCC
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY-----DT---FYTE--------------KYMGLPSE 487 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~-----~~---~~~~--------------~~~g~~~~ 487 (571)
+.++++++|||+||.+++.++.++|......++.+........ .. .+.. ........
T Consensus 79 -~~~~~~l~G~S~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (242)
T d1tqha_ 79 -GYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMK 157 (242)
T ss_dssp -TCCCEEEEEETHHHHHHHHHHTTSCCSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCT
T ss_pred -ccCceEEEEcchHHHHhhhhcccCcccccccccccccccchhHHHHHHHHHHHHHhhhccchhhhHHHHHhhhhhhccc
Confidence 4578999999999999999999988765443332222211000 00 0000 00000000
Q ss_pred Chhh--hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHH
Q 008274 488 DPVG--YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWE 565 (571)
Q Consensus 488 ~~~~--~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 565 (571)
.... .........+..+++|+|+++|++|..++++.++.+++.+. +.++++++++++||.+...+..+.+.+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~ 235 (242)
T d1tqha_ 158 TLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIE--SPVKQIKWYEQSGHVITLDQEKDQLHEDIYA 235 (242)
T ss_dssp THHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCC--CSSEEEEEETTCCSSGGGSTTHHHHHHHHHH
T ss_pred hhhcccccccccccccceeccccceeecccCCccCHHHHHHHHHHcC--CCCcEEEEECCCCCcCccccCHHHHHHHHHH
Confidence 0000 01112234567788999999999999999999999888762 3578999999999987555668889999999
Q ss_pred HHHH
Q 008274 566 FIER 569 (571)
Q Consensus 566 fl~~ 569 (571)
||++
T Consensus 236 Fl~~ 239 (242)
T d1tqha_ 236 FLES 239 (242)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9986
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.83 E-value=1.5e-20 Score=177.25 Aligned_cols=217 Identities=17% Similarity=0.176 Sum_probs=138.7
Q ss_pred EEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHH
Q 008274 324 IQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEA 403 (571)
Q Consensus 324 ~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~ 403 (571)
+++.||.++++..+. . . |.||++||.+.+.. .|...++.|+++||.|+++|+||+|.+.....
T Consensus 3 ~~t~dG~~l~y~~~G-~-------g-~~ivlvHG~~~~~~-------~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~- 65 (274)
T d1a8qa_ 3 CTTRDGVEIFYKDWG-Q-------G-RPVVFIHGWPLNGD-------AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWD- 65 (274)
T ss_dssp EECTTSCEEEEEEEC-S-------S-SEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-
T ss_pred EECcCCCEEEEEEEC-C-------C-CeEEEECCCCCCHH-------HHHHHHHHHHHCCCEEEEEeCCCCcccccccc-
Confidence 577899888877552 1 1 45778999876533 34556788889999999999999987753211
Q ss_pred HHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc-CCCeeEEEEEcCccCCcccc---------
Q 008274 404 SIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR-FPDVFQCAVSGAPVTSWDGY--------- 473 (571)
Q Consensus 404 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~~v~~~~~~~~~~~--------- 473 (571)
.....+....+..+++.- ..+++.++|||+||.+++.++++ +|+++++++..++.......
T Consensus 66 -------~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~ 136 (274)
T d1a8qa_ 66 -------GYDFDTFADDLNDLLTDL--DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVP 136 (274)
T ss_dssp -------CCSHHHHHHHHHHHHHHT--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBC
T ss_pred -------cccchhhHHHHHHHHHHh--hhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhh
Confidence 112333333333333322 34689999999999998886654 58999998887754321100
Q ss_pred c------------------chhhhhhcCC--CCCCh-----h-------------------hhccCCcchhhccCCCcEE
Q 008274 474 D------------------TFYTEKYMGL--PSEDP-----V-------------------GYEYSSVMHHVHKMKGKLL 509 (571)
Q Consensus 474 ~------------------~~~~~~~~g~--~~~~~-----~-------------------~~~~~s~~~~~~~~~~p~l 509 (571)
. ....+.+... +.... + .+...+....+.++++|+|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 216 (274)
T d1a8qa_ 137 DEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTL 216 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEE
T ss_pred HHHHHHHHhhhhhhhHHHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHHHhccceee
Confidence 0 0000111111 10000 0 0111223345678899999
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC-CCCcHHHHHHHHHHHHHH
Q 008274 510 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR-RHRDRIYMEERIWEFIER 569 (571)
Q Consensus 510 li~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~-~~~~~~~~~~~i~~fl~~ 569 (571)
+++|++|..++++...+..+.+ -.++++++++++||... ..++...+.+.+.+||++
T Consensus 217 ii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 217 VVHGDDDQVVPIDATGRKSAQI---IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp EEEETTCSSSCGGGTHHHHHHH---STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred eeccCCCCCcCHHHHHHHHHHh---CCCCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 9999999999987654443333 35679999999999763 345678889999999974
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.83 E-value=9.9e-20 Score=175.15 Aligned_cols=233 Identities=20% Similarity=0.184 Sum_probs=154.2
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHh-CCcEEEEECCCCC
Q 008274 316 LEPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRS-KGILVWKLDNRGT 394 (571)
Q Consensus 316 ~~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~ 394 (571)
....+.+.++. +|.++.+.+|.|++.+ +++|+||++|||+....... .+...+..++. .|+.|+.+|||..
T Consensus 43 ~~~~~~~~~~~-~g~~i~~~~y~P~~~~---~~~Pvvv~iHGGg~~~g~~~----~~~~~~~~~a~~~~~~v~~v~Yrl~ 114 (308)
T d1u4na_ 43 VAEVREFDMDL-PGRTLKVRMYRPEGVE---PPYPALVYYHGGGWVVGDLE----THDPVCRVLAKDGRAVVFSVDYRLA 114 (308)
T ss_dssp CSEEEEEEEEE-TTEEEEEEEEECTTCC---SSEEEEEEECCSTTTSCCTT----TTHHHHHHHHHHHTSEEEEECCCCT
T ss_pred CCcEEEEEEec-CCceEEEEEEeccccC---CCCCEEEEEecCeeeeeccc----cccchhhhhhhcccccccccccccc
Confidence 34466677776 7888999999998642 57999999999976543221 23334556665 4567889999966
Q ss_pred CCChhhhHHHHhccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcCC----CeeEEEEEcCcc
Q 008274 395 ARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARFP----DVFQCAVSGAPV 467 (571)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~~----~~~~~~v~~~~~ 467 (571)
..... ....+|+..+++++.++ ..+|++||+|+|+|+||++++.++.... ..+.+.....+.
T Consensus 115 p~~~~-----------p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~ 183 (308)
T d1u4na_ 115 PEHKF-----------PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPS 183 (308)
T ss_dssp TTSCT-----------THHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCC
T ss_pred ccccc-----------ccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccc
Confidence 54321 11267899999999875 3589999999999999999988876432 223444455554
Q ss_pred CCcccccchh-------------------hhhhcCCCCCChhhhccCCcchhhccCC-CcEEEEecCCCCCCChHHHHHH
Q 008274 468 TSWDGYDTFY-------------------TEKYMGLPSEDPVGYEYSSVMHHVHKMK-GKLLLVHGMIDENVHFRHTARL 527 (571)
Q Consensus 468 ~~~~~~~~~~-------------------~~~~~g~~~~~~~~~~~~s~~~~~~~~~-~p~lli~G~~D~~v~~~~~~~~ 527 (571)
.+........ ...+.+ ..........++........ +|+||++|+.|..+ .++..+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~d~~~~Pp~li~~g~~D~l~--~~~~~~ 259 (308)
T d1u4na_ 184 TGYDPAHPPASIEENAEGYLLTGGMSLWFLDQYLN--SLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLR--DVGKLY 259 (308)
T ss_dssp CCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCS--SGGGGGCTTTCGGGCSCCTTCCCEEEEEEEECTTH--HHHHHH
T ss_pred cccccccccchhhhccccccccchhhhhhhhcccC--ccccccchhhhhhhchhhcCCCCeeEEecCcCCch--HHHHHH
Confidence 4322110000 001111 01111111223322222222 58999999999664 588999
Q ss_pred HHHHHHcCCCeeEEEcCCCCCCCCC----CCcHHHHHHHHHHHHHHhC
Q 008274 528 INALVAARKPYEILIFPDERHMPRR----HRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 528 ~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~l 571 (571)
+++|+++|+++++++||+++|+|.. .......++++.+||++.|
T Consensus 260 ~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 260 AEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp HHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998732 2345678889999998865
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.83 E-value=3.3e-19 Score=161.62 Aligned_cols=207 Identities=16% Similarity=0.193 Sum_probs=153.2
Q ss_pred EEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhh
Q 008274 322 VQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKF 401 (571)
Q Consensus 322 ~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~ 401 (571)
+.|+.++| +|.+++..|.. +..|++|++||.|......+ .......++.|+++||.|+.+|+||.|.+...+
T Consensus 3 v~i~g~~G-~Le~~~~~~~~-----~~~~~~l~~Hp~p~~GG~~~--~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~ 74 (218)
T d2i3da1 3 VIFNGPAG-RLEGRYQPSKE-----KSAPIAIILHPHPQFGGTMN--NQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEF 74 (218)
T ss_dssp EEEEETTE-EEEEEEECCSS-----TTCCEEEEECCCGGGTCCTT--SHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCC
T ss_pred EEEeCCCc-cEEEEEeCCCC-----CCCCEEEEECCCcCcCCcCC--cHHHHHHHHHHHhcCeeEEEEecCccCCCcccc
Confidence 66888888 79998765543 35689999998543211111 112234578899999999999999998876544
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhh
Q 008274 402 EASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKY 481 (571)
Q Consensus 402 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 481 (571)
. .+..+.+|..++++++..+.. ...++.++|+|+||.+++.++.+.+.. .++++.+|.....
T Consensus 75 ~------~~~~e~~d~~aa~~~~~~~~~-~~~~~~~~g~S~G~~~a~~~a~~~~~~-~~~~~~~~~~~~~---------- 136 (218)
T d2i3da1 75 D------HGAGELSDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRRPEI-EGFMSIAPQPNTY---------- 136 (218)
T ss_dssp C------SSHHHHHHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHCTTE-EEEEEESCCTTTS----------
T ss_pred c------cchhHHHHHHHHHhhhhcccc-cccceeEEeeehHHHHHHHHHHhhccc-cceeecccccccc----------
Confidence 2 223347889999999988754 345789999999999999999877655 4555555443210
Q ss_pred cCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHH-cCCCeeEEEcCCCCCCCCCCCcHHHHH
Q 008274 482 MGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVA-ARKPYEILIFPDERHMPRRHRDRIYME 560 (571)
Q Consensus 482 ~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H~~~~~~~~~~~~ 560 (571)
....+....+|+|++||+.|.+++......+.+.++. ++...+++++|+++|.|. .....+.
T Consensus 137 ---------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~--g~~~~l~ 199 (218)
T d2i3da1 137 ---------------DFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN--GKVDELM 199 (218)
T ss_dssp ---------------CCTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT--TCHHHHH
T ss_pred ---------------chhhccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCc--CCHHHHH
Confidence 0122344568999999999999999999999988875 356789999999999884 4567888
Q ss_pred HHHHHHHHHhC
Q 008274 561 ERIWEFIERTL 571 (571)
Q Consensus 561 ~~i~~fl~~~l 571 (571)
+.+.+||+++|
T Consensus 200 ~~v~~~l~~~l 210 (218)
T d2i3da1 200 GECEDYLDRRL 210 (218)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999875
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.83 E-value=2.4e-20 Score=175.85 Aligned_cols=219 Identities=17% Similarity=0.183 Sum_probs=142.5
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
++++.||.+|++..+.|++ .|.||++||.+++.. .|...+..|+++||.|+++|+||+|.+....
T Consensus 2 ~i~~~dG~~l~y~~~G~~~-------~~~vv~lHG~~~~~~-------~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~- 66 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPRD-------GLPVVFHHGWPLSAD-------DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPS- 66 (275)
T ss_dssp EEECTTSCEEEEEEESCTT-------SCEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS-
T ss_pred EEEecCCCEEEEEEecCCC-------CCeEEEECCCCCCHH-------HHHHHHHHHHhCCCEEEEEeccccccccccc-
Confidence 4778899999999998754 256788999877543 3455678899999999999999998765321
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeech-HHHHHHHHHhcCCCeeEEEEEcCccCCcccc--------
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSY-GGYLSAITLARFPDVFQCAVSGAPVTSWDGY-------- 473 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~-GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~-------- 473 (571)
.....++..+.+..+++.- +.+++.++|||+ ||.++..++.++|++++.++..++.......
T Consensus 67 -------~~~~~~~~~~~~~~~l~~l--~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 137 (275)
T d1a88a_ 67 -------TGHDMDTYAADVAALTEAL--DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGL 137 (275)
T ss_dssp -------SCCSHHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSB
T ss_pred -------ccccccccccccccccccc--cccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhh
Confidence 1122334333333333321 446788888886 6666777788899999999887754321100
Q ss_pred -----c-----------chhhhh----hcCC--C--CCChh---h-------------------hccCCcchhhccCCCc
Q 008274 474 -----D-----------TFYTEK----YMGL--P--SEDPV---G-------------------YEYSSVMHHVHKMKGK 507 (571)
Q Consensus 474 -----~-----------~~~~~~----~~g~--~--~~~~~---~-------------------~~~~s~~~~~~~~~~p 507 (571)
. ..+... +... . ..... . +...+....+.++++|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 217 (275)
T d1a88a_ 138 PLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVP 217 (275)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSC
T ss_pred hhhhhhhhhhhhhhhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHhhccc
Confidence 0 000000 0000 0 00000 0 0112223346778999
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 508 LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 508 ~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+|+++|++|..+|.....+...++ ..++++++++++||.+ ..++.+.+.+.|.+||+.
T Consensus 218 ~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 218 VLVAHGTDDQVVPYADAAPKSAEL---LANATLKSYEGLPHGM-LSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp EEEEEETTCSSSCSTTTHHHHHHH---STTEEEEEETTCCTTH-HHHCHHHHHHHHHHHHHC
T ss_pred cceeecCCCCCcCHHHHHHHHHHh---CCCCEEEEECCCCCch-HHhCHHHHHHHHHHHHcC
Confidence 999999999999987655444433 4578999999999986 345788899999999973
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.83 E-value=1.6e-19 Score=171.02 Aligned_cols=225 Identities=12% Similarity=0.029 Sum_probs=139.9
Q ss_pred EEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhh
Q 008274 321 IVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK 400 (571)
Q Consensus 321 ~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~ 400 (571)
+.+++. ++.++++....++ ..|+||++||.+........ |...+..|++ ||.|+++|+||+|.+...
T Consensus 6 ~~~~~~-~~~~~h~~~~G~~-------~~p~ivllHG~~~~~~~~~~----~~~~~~~L~~-~~~vi~~D~~G~G~S~~~ 72 (281)
T d1c4xa_ 6 EKRFPS-GTLASHALVAGDP-------QSPAVVLLHGAGPGAHAASN----WRPIIPDLAE-NFFVVAPDLIGFGQSEYP 72 (281)
T ss_dssp EEEECC-TTSCEEEEEESCT-------TSCEEEEECCCSTTCCHHHH----HGGGHHHHHT-TSEEEEECCTTSTTSCCC
T ss_pred EEEEcc-CCEEEEEEEEecC-------CCCEEEEECCCCCCCcHHHH----HHHHHHHHhC-CCEEEEEeCCCCcccccc
Confidence 334433 4567887776553 23889999996654321112 3445666654 999999999999877432
Q ss_pred hHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc-------
Q 008274 401 FEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY------- 473 (571)
Q Consensus 401 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~------- 473 (571)
..... .......+..+.+..++++. ..+++.++|||+||.+++.++.++|++++++++.++.......
T Consensus 73 ~~~~~---~~~~~~~~~~~~i~~~i~~~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~ 147 (281)
T d1c4xa_ 73 ETYPG---HIMSWVGMRVEQILGLMNHF--GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELAR 147 (281)
T ss_dssp SSCCS---SHHHHHHHHHHHHHHHHHHH--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHH
T ss_pred ccccc---cchhhHHHhhhhcccccccc--ccccceeccccccccccccccccccccccceEEeccccCccccchhHHHH
Confidence 10000 00000122222222222221 3468999999999999999999999999999988775321100
Q ss_pred -----c-c---hhh---hhhcCCCCCCh---h----------------------------hhccCCcchhhccCCCcEEE
Q 008274 474 -----D-T---FYT---EKYMGLPSEDP---V----------------------------GYEYSSVMHHVHKMKGKLLL 510 (571)
Q Consensus 474 -----~-~---~~~---~~~~g~~~~~~---~----------------------------~~~~~s~~~~~~~~~~p~ll 510 (571)
. . .+. ..+...+.... . ......+...+.++++|+|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 227 (281)
T d1c4xa_ 148 LLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLV 227 (281)
T ss_dssp HHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEE
T ss_pred HHHhhhhcccchhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEE
Confidence 0 0 000 00111111000 0 00011223346778899999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 511 VHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 511 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
++|++|..++++.++.+.+.+ .+.+++++|++||.+ ..++.+.+.+.+.+||+
T Consensus 228 i~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~Fl~ 280 (281)
T d1c4xa_ 228 FHGRQDRIVPLDTSLYLTKHL----KHAELVVLDRCGHWA-QLERWDAMGPMLMEHFR 280 (281)
T ss_dssp EEETTCSSSCTHHHHHHHHHC----SSEEEEEESSCCSCH-HHHSHHHHHHHHHHHHH
T ss_pred EEeCCCCCcCHHHHHHHHHHC----CCCEEEEECCCCCch-HHhCHHHHHHHHHHHhC
Confidence 999999999999888877654 567999999999987 34667889999999997
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.82 E-value=2.7e-19 Score=167.03 Aligned_cols=207 Identities=11% Similarity=-0.003 Sum_probs=137.0
Q ss_pred CCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCC----cEEEEECC
Q 008274 317 EPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG----ILVWKLDN 391 (571)
Q Consensus 317 ~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~ 391 (571)
.+.+.+++.+. +|.++++++|.|++++ ..+++|+|+++||+++......................+ +.+...+.
T Consensus 20 g~~~~~~~~S~~~g~~~~~~v~lP~~y~-~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (255)
T d1jjfa_ 20 GQVVNISYFSTATNSTRPARVYLPPGYS-KDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNT 98 (255)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECTTCC-TTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECC
T ss_pred eEEEEEEEEecCCCCEEEEEEEeCCCCC-CCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeeccc
Confidence 45677888764 6889999999999873 447899999999987654321111111112223333322 44555544
Q ss_pred CCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc--CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC
Q 008274 392 RGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ--GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS 469 (571)
Q Consensus 392 rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~ 469 (571)
............... ...+.+.+.++.++ ..+|.++++++|+|+||++++.+++++|++|+++++.+|..+
T Consensus 99 ~~~~~~~~~~~~~~~-------~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~ 171 (255)
T d1jjfa_ 99 NAAGPGIADGYENFT-------KDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPN 171 (255)
T ss_dssp CCCCTTCSCHHHHHH-------HHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTT
T ss_pred ccccccccccccchH-------HHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcC
Confidence 432221111111110 11233344444443 347889999999999999999999999999999999988764
Q ss_pred cccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC
Q 008274 470 WDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM 549 (571)
Q Consensus 470 ~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 549 (571)
....... ..+..........|++|.||++|..++ .+++++++|++++.++++..+++++|.
T Consensus 172 ~~~~~~~-----------------~~~~~~~~~~~~~~~~i~~G~~D~~~~--~~~~~~~~L~~~g~~~~~~~~~~ggH~ 232 (255)
T d1jjfa_ 172 TYPNERL-----------------FPDGGKAAREKLKLLFIACGTNDSLIG--FGQRVHEYCVANNINHVYWLIQGGGHD 232 (255)
T ss_dssp SCCHHHH-----------------CTTTTHHHHHHCSEEEEEEETTCTTHH--HHHHHHHHHHHTTCCCEEEEETTCCSS
T ss_pred Ccccccc-----------------cccHHHHhhccCCcceEEeCCCCCCch--HHHHHHHHHHHCCCCEEEEEECCCCcC
Confidence 3211111 111223344556899999999999866 567899999999999999999999997
Q ss_pred C
Q 008274 550 P 550 (571)
Q Consensus 550 ~ 550 (571)
+
T Consensus 233 ~ 233 (255)
T d1jjfa_ 233 F 233 (255)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.82 E-value=6.6e-20 Score=181.40 Aligned_cols=247 Identities=15% Similarity=0.125 Sum_probs=156.3
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEEcCC-CCCCCCCCceEEEEEcCCCCceeecccccccc--hhhhHHHHhCCcEEEEEC
Q 008274 314 LQLEPPDIVQIQANDGTVLYGALYKPD-ESRYGPPPYKTLISVYGGPCVQLVCDSWINTV--DMRAQYLRSKGILVWKLD 390 (571)
Q Consensus 314 ~~~~~~~~~~~~~~dg~~l~~~~~~P~-~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~--~~~~~~l~~~G~~v~~~d 390 (571)
+.+ ..|.+.+++.||..|..+.+... ......++.|+||++||.+++.. .|.... ..++..|+++||.|+++|
T Consensus 23 ~~y-~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~---~~~~~~~~~sla~~L~~~Gy~V~~~D 98 (377)
T d1k8qa_ 23 WGY-PAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT---NWISNLPNNSLAFILADAGYDVWLGN 98 (377)
T ss_dssp TTC-CCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG---GGSSSCTTTCHHHHHHHTTCEEEECC
T ss_pred cCC-CceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchh---HHhhcCccchHHHHHHHCCCEEEEEc
Confidence 445 45778999999988877654321 11123356789999999877643 443221 335889999999999999
Q ss_pred CCCCCCChhhhHHHH-hccCCC-----CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE-
Q 008274 391 NRGTARRGLKFEASI-KHNCGR-----IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS- 463 (571)
Q Consensus 391 ~rG~~~~~~~~~~~~-~~~~~~-----~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~- 463 (571)
+||+|.+...-.... ...... ....|+.++++++.+.. ..+++.++||||||.+++.++..+|+.++.+++
T Consensus 99 ~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~--g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~ 176 (377)
T d1k8qa_ 99 SRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTF 176 (377)
T ss_dssp CTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEE
T ss_pred CCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHc--CCCCEEEEEecchHHHHHHHHHhhhhhhhhceeE
Confidence 999998753211000 000001 12457888888887763 346899999999999999999999876544333
Q ss_pred --cCccCCccccc--------------------------chhhh---------------------hhcCCC--CCCh---
Q 008274 464 --GAPVTSWDGYD--------------------------TFYTE---------------------KYMGLP--SEDP--- 489 (571)
Q Consensus 464 --~~~~~~~~~~~--------------------------~~~~~---------------------~~~g~~--~~~~--- 489 (571)
.+|........ ..... ...+.. ..+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (377)
T d1k8qa_ 177 YALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRL 256 (377)
T ss_dssp EEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGH
T ss_pred eeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcccccHHHh
Confidence 33322100000 00000 000000 0000
Q ss_pred hh----------------------------------------h-ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHH
Q 008274 490 VG----------------------------------------Y-EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLI 528 (571)
Q Consensus 490 ~~----------------------------------------~-~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~ 528 (571)
.. + ....+...+.++++|+|+++|+.|.+++++..+.+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~~~l~ 336 (377)
T d1k8qa_ 257 DVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLL 336 (377)
T ss_dssp HHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHH
T ss_pred hhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHHHHHH
Confidence 00 0 001122346778899999999999999999888877
Q ss_pred HHHHHcCCCeeEEEcCCCCCC--CCCCCcHHHHHHHHHHHHHH
Q 008274 529 NALVAARKPYEILIFPDERHM--PRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 529 ~~l~~~~~~~~~~~~~~~~H~--~~~~~~~~~~~~~i~~fl~~ 569 (571)
+.+ ...++.++++++||. +...+..+++++.|++||+.
T Consensus 337 ~~l---p~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 337 SKL---PNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp TTC---TTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred HHC---CCCeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 665 233578899999996 23456788999999999985
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.82 E-value=9.3e-20 Score=171.11 Aligned_cols=188 Identities=16% Similarity=0.149 Sum_probs=129.1
Q ss_pred CCceEEEEEcCCCCceeec--ccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVC--DSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWL 424 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~--~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l 424 (571)
++.|+||++|||++..... ..|......++..++++||.|+++|||.++.... ...++|+.++++++
T Consensus 29 ~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~-----------~~~~~d~~~~~~~l 97 (263)
T d1vkha_ 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN-----------PRNLYDAVSNITRL 97 (263)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT-----------THHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhh-----------hHHHHhhhhhhhcc
Confidence 4679999999986532211 1111112233456668999999999998754321 11268899999999
Q ss_pred HHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-----------------eeEEEEEcCccCCcccccc------hhhhhh
Q 008274 425 IKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-----------------VFQCAVSGAPVTSWDGYDT------FYTEKY 481 (571)
Q Consensus 425 ~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-----------------~~~~~v~~~~~~~~~~~~~------~~~~~~ 481 (571)
.+.. +..+++|+|||+||.+++.++...++ ...+.+..++..++..... .+....
T Consensus 98 ~~~~--~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (263)
T d1vkha_ 98 VKEK--GLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTRLA 175 (263)
T ss_dssp HHHH--TCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHHHH
T ss_pred cccc--cccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccchhhhhhccccchhhhcc
Confidence 8874 66799999999999999998875432 3456666666665432211 111112
Q ss_pred cCCCCCChhhhccCC------cchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 482 MGLPSEDPVGYEYSS------VMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 482 ~g~~~~~~~~~~~~s------~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
++. ....+.... ....+.++.+|+|++||++|++||++++..|+++|++.+++++++++++++|..
T Consensus 176 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~~~~~~~~~~H~~ 247 (263)
T d1vkha_ 176 FPD---GIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHND 247 (263)
T ss_dssp CTT---CGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGG
T ss_pred ccc---ccccccccccccCccccccccccCCCeeeeecCCCcccCHHHHHHHHHHHHHCCCCEEEEEECCCCchh
Confidence 211 111111111 123355678999999999999999999999999999999999999999999975
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=1.3e-19 Score=175.20 Aligned_cols=224 Identities=10% Similarity=-0.016 Sum_probs=146.7
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
....-.++..||.++++..+. .-|+||++||.+++.. .|...++.|+++||.|+++|+||+|.+
T Consensus 10 ~~~~~~v~~~~g~~i~y~~~G---------~gp~vlllHG~~~~~~-------~~~~~~~~L~~~g~~vi~~D~~G~G~S 73 (322)
T d1zd3a2 10 DMSHGYVTVKPRVRLHFVELG---------SGPAVCLCHGFPESWY-------SWRYQIPALAQAGYRVLAMDMKGYGES 73 (322)
T ss_dssp GSEEEEEEEETTEEEEEEEEC---------CSSEEEEECCTTCCGG-------GGTTHHHHHHHTTCEEEEEECTTSTTS
T ss_pred CCceeEEEECCCCEEEEEEEc---------CCCeEEEECCCCCCHH-------HHHHHHHHHHHCCCEEEEecccccccc
Confidence 344556677789888877552 1278899999877643 345568899999999999999999876
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc--c---
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD--G--- 472 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~--~--- 472 (571)
....... ....++....+..++++- +.+++.++|||+||.+++.++.++|++++++++.++..... .
T Consensus 74 ~~~~~~~------~~~~~~~~~~i~~l~~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 145 (322)
T d1zd3a2 74 SAPPEIE------EYCMEVLCKEMVTFLDKL--GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSP 145 (322)
T ss_dssp CCCSCGG------GGSHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCH
T ss_pred ccccccc------cccccccchhhhhhhhcc--cccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccch
Confidence 4321111 112445555555554431 45689999999999999999999999999988875422100 0
Q ss_pred ------cc-------------------ch---hhhhhcCCC---------------------CC-------Chh------
Q 008274 473 ------YD-------------------TF---YTEKYMGLP---------------------SE-------DPV------ 490 (571)
Q Consensus 473 ------~~-------------------~~---~~~~~~g~~---------------------~~-------~~~------ 490 (571)
.. .. ......... .. ...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (322)
T d1zd3a2 146 LESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYV 225 (322)
T ss_dssp HHHHHTCGGGHHHHHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHH
T ss_pred hhhhhccchhhhHHhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHH
Confidence 00 00 000000000 00 000
Q ss_pred -hh------------------ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCC
Q 008274 491 -GY------------------EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPR 551 (571)
Q Consensus 491 -~~------------------~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 551 (571)
.+ ...+......++++|+|+++|++|..++++....+.+. -.+.++++++++||.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~- 300 (322)
T d1zd3a2 226 QQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDW----IPHLKRGHIEDCGHWT- 300 (322)
T ss_dssp HHHHHHTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGT----CTTCEEEEETTCCSCH-
T ss_pred HHHhhcccccccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHh----CCCCEEEEECCCCCch-
Confidence 00 00011122356789999999999999998877666543 3578899999999986
Q ss_pred CCCcHHHHHHHHHHHHHHh
Q 008274 552 RHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 552 ~~~~~~~~~~~i~~fl~~~ 570 (571)
..++.+.+.+.|.+||+++
T Consensus 301 ~~e~p~~v~~~i~~FL~~~ 319 (322)
T d1zd3a2 301 QMDKPTEVNQILIKWLDSD 319 (322)
T ss_dssp HHHSHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHhhc
Confidence 4466788999999999975
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.80 E-value=1.5e-19 Score=174.01 Aligned_cols=218 Identities=15% Similarity=0.113 Sum_probs=142.9
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.+|.++++.-..+.+ ..|+||++||.+.+.. .|...+..|+++||.|+++|+||+|.+......
T Consensus 31 ~~g~~~~y~~~G~~~------~~p~llllHG~~~~~~-------~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~--- 94 (310)
T d1b6ga_ 31 YPGLRAHYLDEGNSD------AEDVFLCLHGEPTWSY-------LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDE--- 94 (310)
T ss_dssp CTTCEEEEEEEECTT------CSCEEEECCCTTCCGG-------GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCG---
T ss_pred CCCEEEEEEEecCCC------CCCEEEEECCCCCchH-------HHHHHHHHhhccCceEEEeeecCcccccccccc---
Confidence 478888877665543 3489999999877643 344567889999999999999999987632110
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc------------
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD------------ 474 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~------------ 474 (571)
......++.+.+..+++.- +.+++.|+||||||.+++.+|.++|++++++|+.++........
T Consensus 95 ---~~~~~~~~~~~l~~~l~~l--~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 169 (310)
T d1b6ga_ 95 ---EDYTFEFHRNFLLALIERL--DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPA 169 (310)
T ss_dssp ---GGCCHHHHHHHHHHHHHHH--TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSST
T ss_pred ---ccccccccccchhhhhhhc--cccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcch
Confidence 1112455555555555542 45689999999999999999999999999999886643211000
Q ss_pred -ch--hh-----------hhhc--CCCCCCh---hhhcc--------------------CC----------cchhhccCC
Q 008274 475 -TF--YT-----------EKYM--GLPSEDP---VGYEY--------------------SS----------VMHHVHKMK 505 (571)
Q Consensus 475 -~~--~~-----------~~~~--g~~~~~~---~~~~~--------------------~s----------~~~~~~~~~ 505 (571)
.. +. ..+. ..+.... ..|.. .. .......++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (310)
T d1b6ga_ 170 DGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWN 249 (310)
T ss_dssp TTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCC
T ss_pred hhhhhhhhhhccchhhhhhhhhhccCccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccC
Confidence 00 00 0000 0000000 00000 00 001234578
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+|+|+++|++|..++++....+.+.+ ....++++++++||.+ ..+..+.+.+.+.+||++
T Consensus 250 ~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~GH~~-~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 250 GQTFMAIGMKDKLLGPDVMYPMKALI---NGCPEPLEIADAGHFV-QEFGEQVAREALKHFAET 309 (310)
T ss_dssp SEEEEEEETTCSSSSHHHHHHHHHHS---TTCCCCEEETTCCSCG-GGGHHHHHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCCCCHHHHHHHHHhc---CCCccEEEECCCcCch-hhhCHHHHHHHHHHHHhC
Confidence 99999999999999998887777655 2234677899999976 456677888888899875
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=6.6e-19 Score=161.13 Aligned_cols=193 Identities=15% Similarity=0.002 Sum_probs=125.9
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC------ChhhhHHHHhc-cCCCCCc---hh
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR------RGLKFEASIKH-NCGRIDA---ED 416 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~------~~~~~~~~~~~-~~~~~~~---~D 416 (571)
+..++||++||.+++.. . +......+...++.+++++-+.... .+..|...... .-...+. ++
T Consensus 19 ~~~~~VI~lHG~G~~~~---~----~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~ 91 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTGH---G----WAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQ 91 (229)
T ss_dssp CCSEEEEEECCSSSCHH---H----HHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHH
T ss_pred CCCCEEEEEcCCCCCHH---H----HHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHH
Confidence 45578999999655432 2 2223455567899999988653110 01111100000 0001112 22
Q ss_pred HHHHHHHHHH---cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhc
Q 008274 417 QLTGAEWLIK---QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYE 493 (571)
Q Consensus 417 ~~~~~~~l~~---~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 493 (571)
..+.++.+++ +..+|.+||+|+|+|+||.+|+.++.++|+.|+++++.++...... .+.
T Consensus 92 ~~~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~--------~~~---------- 153 (229)
T d1fj2a_ 92 AAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA--------SFP---------- 153 (229)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG--------GSC----------
T ss_pred HHHHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccc--------ccc----------
Confidence 2223333322 2357999999999999999999999999999999999887432110 000
Q ss_pred cCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHc--CCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 494 YSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAA--RKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 494 ~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~--~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
..+ ....+.++|+|++||++|.+||++.++++++.|++. +.+++++.|++.||.+. .+..+.+.+||+++|
T Consensus 154 -~~~-~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~-----~~~~~~~~~wL~~~L 226 (229)
T d1fj2a_ 154 -QGP-IGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC-----QQEMMDVKQFIDKLL 226 (229)
T ss_dssp -SSC-CCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC-----HHHHHHHHHHHHHHS
T ss_pred -ccc-cccccccCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccC-----HHHHHHHHHHHHhHC
Confidence 000 011223579999999999999999999999999884 57899999999999873 234677999999986
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.80 E-value=2.8e-19 Score=177.10 Aligned_cols=248 Identities=16% Similarity=0.195 Sum_probs=165.0
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCc----eee-cccccccchhhhHHHHhCCcEEEEECCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCV----QLV-CDSWINTVDMRAQYLRSKGILVWKLDNR 392 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~----~~~-~~~~~~~~~~~~~~l~~~G~~v~~~d~r 392 (571)
..+.+.++..||.+|.+.+|.|++. +++|+||+.|+.... ... ...........++.|+++||+|+.+|.|
T Consensus 27 ~~~~v~ipmrDG~~L~~~v~~P~~~----~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~R 102 (385)
T d2b9va2 27 IKREVMVPMRDGVKLYTVIVIPKNA----RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIR 102 (385)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTC----CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECT
T ss_pred eEeEEEEECCCCCEEEEEEEEcCCC----CceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCC
Confidence 4567999999999999999999763 689999988652110 000 0000111233478899999999999999
Q ss_pred CCCCChhhhHHH-----HhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCcc
Q 008274 393 GTARRGLKFEAS-----IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPV 467 (571)
Q Consensus 393 G~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~ 467 (571)
|+++|+..+... .....+..+.+|..++++|+.+++..+..||+++|+||||++++.+|...|+.++|++..+++
T Consensus 103 G~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~ 182 (385)
T d2b9va2 103 GKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPM 182 (385)
T ss_dssp TSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEEC
T ss_pred cccCCCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEeccc
Confidence 999998766432 223344456899999999999997678889999999999999999999999999999998887
Q ss_pred CCcccccc-------------hhhhh--hcC--C--CCC-------------------------------------Chhh
Q 008274 468 TSWDGYDT-------------FYTEK--YMG--L--PSE-------------------------------------DPVG 491 (571)
Q Consensus 468 ~~~~~~~~-------------~~~~~--~~g--~--~~~-------------------------------------~~~~ 491 (571)
.++..... .+... ..+ . +.. ..+.
T Consensus 183 ~d~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~d~~ 262 (385)
T d2b9va2 183 VDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAYDAF 262 (385)
T ss_dssp CCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCSSSHH
T ss_pred ccccccccccCCchhccccHHHHHhhhhhcccCccccccchHHHHHHHHhccccccchhcccchhhhhhhhccCcccchh
Confidence 66432110 00000 000 0 000 0022
Q ss_pred hccCCcchhhc--cCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC--CCeeEEEcCCCCCCCC-------------CCC
Q 008274 492 YEYSSVMHHVH--KMKGKLLLVHGMIDENVHFRHTARLINALVAAR--KPYEILIFPDERHMPR-------------RHR 554 (571)
Q Consensus 492 ~~~~s~~~~~~--~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~--~~~~~~~~~~~~H~~~-------------~~~ 554 (571)
+...++...+. ++..|+|++.|..|... ...+...++.++... .+.++++-|. +|... ...
T Consensus 263 w~~~s~~~~~~~~~i~vP~l~~~g~~dd~~-~~g~~~~~~~l~~~~~~~~~~LiiGPw-~H~~~~~~~~~~g~~~~~~~~ 340 (385)
T d2b9va2 263 WQGQALDKILAQRKPTVPMLWEQGLWDQED-MWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTLGPLEFEGDT 340 (385)
T ss_dssp HHTTCHHHHHHHHCCCSCEEEEEETTCSSC-SSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEETTEECSSCH
T ss_pred hhhcChhHHHhhccccCceEEEEecccCCc-ccchHHHHHHHHhhccCCCcEEEEeCC-cCCCcccccccccccccCccc
Confidence 23334443433 45579999999887654 445666777776654 4678877776 56421 111
Q ss_pred cHHHHHHHHHHHHHHhC
Q 008274 555 DRIYMEERIWEFIERTL 571 (571)
Q Consensus 555 ~~~~~~~~i~~fl~~~l 571 (571)
......+.+++||+++|
T Consensus 341 ~~~~~~~~~l~WFD~~L 357 (385)
T d2b9va2 341 AHQYRRDVFRPFFDEYL 357 (385)
T ss_dssp HHHHHHHTHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHc
Confidence 23445566789999886
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.80 E-value=8.7e-19 Score=164.74 Aligned_cols=216 Identities=13% Similarity=0.097 Sum_probs=142.5
Q ss_pred cCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHH
Q 008274 326 ANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASI 405 (571)
Q Consensus 326 ~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~ 405 (571)
..+|..+++..+. ++ |.||++||.+........ |...+..|+ +||.|+++|+||+|.+.....
T Consensus 9 ~~~G~~~~Y~~~G-------~G--~pvvllHG~~~~~~~~~~----~~~~~~~l~-~~~~vi~~Dl~G~G~S~~~~~--- 71 (271)
T d1uk8a_ 9 LAAGVLTNYHDVG-------EG--QPVILIHGSGPGVSAYAN----WRLTIPALS-KFYRVIAPDMVGFGFTDRPEN--- 71 (271)
T ss_dssp EETTEEEEEEEEC-------CS--SEEEEECCCSTTCCHHHH----HTTTHHHHT-TTSEEEEECCTTSTTSCCCTT---
T ss_pred EECCEEEEEEEEe-------eC--CeEEEECCCCCCccHHHH----HHHHHHHHh-CCCEEEEEeCCCCCCcccccc---
Confidence 3478888876542 12 456788997655331112 233345554 699999999999987753211
Q ss_pred hccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc----------
Q 008274 406 KHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT---------- 475 (571)
Q Consensus 406 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~---------- 475 (571)
.....++..+.+..+.+.- +.+++.++|||+||.+++.++.++|++++++++.++.........
T Consensus 72 ----~~~~~~~~~~~~~~~~~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T d1uk8a_ 72 ----YNYSKDSWVDHIIGIMDAL--EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTP 145 (271)
T ss_dssp ----CCCCHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHHTCCS
T ss_pred ----ccccccccchhhhhhhhhh--cCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhhhccc
Confidence 1223556666666666653 456899999999999999999999999999988776532110000
Q ss_pred ------hhhhh----------------------------hcCCCCCChhhh--ccCCcchhhccCCCcEEEEecCCCCCC
Q 008274 476 ------FYTEK----------------------------YMGLPSEDPVGY--EYSSVMHHVHKMKGKLLLVHGMIDENV 519 (571)
Q Consensus 476 ------~~~~~----------------------------~~g~~~~~~~~~--~~~s~~~~~~~~~~p~lli~G~~D~~v 519 (571)
..... +..........+ ........+.++++|+|+++|++|..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 225 (271)
T d1uk8a_ 146 SIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVV 225 (271)
T ss_dssp CHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSS
T ss_pred hhHHHHHHHHHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHhhccceeEEecCCCCCc
Confidence 00000 000000000000 111223456788999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 520 HFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 520 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
|++.+..+.+.+ .+++++++|++||.+ ..++.+.+.+.|.+||++
T Consensus 226 ~~~~~~~~~~~~----~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 226 PLSSSLRLGELI----DRAQLHVFGRCGHWT-QIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp CHHHHHHHHHHC----TTEEEEEESSCCSCH-HHHTHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhC----CCCEEEEECCCCCch-HHHCHHHHHHHHHHHHhc
Confidence 999888877765 567999999999986 456788899999999986
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.80 E-value=1.9e-19 Score=169.32 Aligned_cols=216 Identities=19% Similarity=0.232 Sum_probs=141.2
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
+|.+.||.++++.... +. |.||++||.+++.. .|...+..|.++||.|+++|+||+|.+....
T Consensus 2 ~f~~~dG~~i~y~~~G--------~g-~pvvllHG~~~~~~-------~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~- 64 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWG--------SG-QPIVFSHGWPLNAD-------SWESQMIFLAAQGYRVIAHDRRGHGRSSQPW- 64 (273)
T ss_dssp EEECTTSCEEEEEEES--------CS-SEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS-
T ss_pred EEEeeCCcEEEEEEEC--------CC-CeEEEECCCCCCHH-------HHHHHHHHHHhCCCEEEEEechhcCcccccc-
Confidence 5788899999877552 12 44678999877543 3556678899999999999999998775321
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHH-HhcCCCeeEEEEEcCccCCcccc--------
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAIT-LARFPDVFQCAVSGAPVTSWDGY-------- 473 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~-~~~~~~~~~~~v~~~~~~~~~~~-------- 473 (571)
......+..+.+..+++.- +..+..++|||+||.+++.+ +..+|+++++++..++.......
T Consensus 65 -------~~~~~~~~~~~~~~~l~~l--~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~ 135 (273)
T d1a8sa_ 65 -------SGNDMDTYADDLAQLIEHL--DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGL 135 (273)
T ss_dssp -------SCCSHHHHHHHHHHHHHHT--TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSB
T ss_pred -------ccccccchHHHHHHHHHhc--CccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccc
Confidence 1123444444444444432 44578899999988665554 55579999988877654321100
Q ss_pred -----c-----------chhhh----hhcC--CCC--CCh----------------------hhhccCCcchhhccCCCc
Q 008274 474 -----D-----------TFYTE----KYMG--LPS--EDP----------------------VGYEYSSVMHHVHKMKGK 507 (571)
Q Consensus 474 -----~-----------~~~~~----~~~g--~~~--~~~----------------------~~~~~~s~~~~~~~~~~p 507 (571)
. ..... .... .+. ... ..+...+....+.++++|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 215 (273)
T d1a8sa_ 136 PMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVP 215 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSC
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHHHhhccc
Confidence 0 00000 0000 000 000 001122334456788999
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 508 LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 508 ~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
+|+++|++|..++.+.+..+.+.+ ..+++++++|++||.+ ..++.+.+.+.|.+||+
T Consensus 216 vlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 216 TLVVHGDADQVVPIEASGIASAAL---VKGSTLKIYSGAPHGL-TDTHKDQLNADLLAFIK 272 (273)
T ss_dssp EEEEEETTCSSSCSTTTHHHHHHH---STTCEEEEETTCCSCH-HHHTHHHHHHHHHHHHH
T ss_pred eEEEecCCCCCCCHHHHHHHHHHh---CCCCEEEEECCCCCch-HHhCHHHHHHHHHHHcC
Confidence 999999999999988777776655 4568899999999987 44678889999999986
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.80 E-value=2.1e-19 Score=168.73 Aligned_cols=217 Identities=21% Similarity=0.231 Sum_probs=142.3
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhH
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFE 402 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~ 402 (571)
+|...||.+|++..+. .. |.||++||.+++.. .|...++.|+++||.|+++|+||+|.+....
T Consensus 2 ~f~~~dG~~l~y~~~G--------~g-~~vv~lHG~~~~~~-------~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~- 64 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDWG--------SG-KPVLFSHGWLLDAD-------MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPW- 64 (271)
T ss_dssp EEECTTSCEEEEEEES--------SS-SEEEEECCTTCCGG-------GGHHHHHHHHTTTCEEEEECCTTSTTSCCCS-
T ss_pred EEEeECCeEEEEEEEc--------CC-CeEEEECCCCCCHH-------HHHHHHHHHHhCCCEEEEEeccccccccccc-
Confidence 4667899999876552 11 44678999877643 3456678899999999999999998774321
Q ss_pred HHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHH-HHhcCCCeeEEEEEcCccCCccccc-------
Q 008274 403 ASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAI-TLARFPDVFQCAVSGAPVTSWDGYD------- 474 (571)
Q Consensus 403 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~-~~~~~~~~~~~~v~~~~~~~~~~~~------- 474 (571)
.....++..+.+..+.+.- +.+++.++|||+||.+++. ++..+|++++.++..++........
T Consensus 65 -------~~~~~~~~~~~~~~~~~~~--~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~ 135 (271)
T d1va4a_ 65 -------TGNDYDTFADDIAQLIEHL--DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGV 135 (271)
T ss_dssp -------SCCSHHHHHHHHHHHHHHH--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSB
T ss_pred -------cccccccccccceeeeeec--CCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhh
Confidence 1123444444444444432 4568999999998876654 5566899999988877654321000
Q ss_pred ------c--------------hhhhhhcCCC--CC----------------Ch-------hhhccCCcchhhccCCCcEE
Q 008274 475 ------T--------------FYTEKYMGLP--SE----------------DP-------VGYEYSSVMHHVHKMKGKLL 509 (571)
Q Consensus 475 ------~--------------~~~~~~~g~~--~~----------------~~-------~~~~~~s~~~~~~~~~~p~l 509 (571)
. .+.....+.. .. .. ..+...+....+.++++|+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 215 (271)
T d1va4a_ 136 PLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTL 215 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEE
T ss_pred hhhHHHHHHHHhhhhhhhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhhhccccee
Confidence 0 0000000100 00 00 00112233345677899999
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 510 LVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 510 li~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+++|++|..++++...++.+.+ ..+++++++|++||.+ ..++.+.+.+.|.+||++
T Consensus 216 ~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 216 VIHGDGDQIVPFETTGKVAAEL---IKGAELKVYKDAPHGF-AVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp EEEETTCSSSCGGGTHHHHHHH---STTCEEEEETTCCTTH-HHHTHHHHHHHHHHHHTC
T ss_pred ecccCCCCCCCHHHHHHHHHHh---CCCCEEEEECCCCCch-HHhCHHHHHHHHHHHHCc
Confidence 9999999999998887776655 3567899999999986 345678899999999974
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.80 E-value=2.9e-19 Score=167.81 Aligned_cols=215 Identities=12% Similarity=0.011 Sum_probs=137.6
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHh
Q 008274 327 NDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIK 406 (571)
Q Consensus 327 ~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~ 406 (571)
.||.++++.... ++ |.||++||.++....... |......| ++||.|+++|+||+|.+....
T Consensus 9 ~dg~~l~y~~~G-------~g--~~vvllHG~~~~~~~~~~----~~~~~~~l-~~~~~v~~~D~~G~G~S~~~~----- 69 (268)
T d1j1ia_ 9 AGGVETRYLEAG-------KG--QPVILIHGGGAGAESEGN----WRNVIPIL-ARHYRVIAMDMLGFGKTAKPD----- 69 (268)
T ss_dssp ETTEEEEEEEEC-------CS--SEEEEECCCSTTCCHHHH----HTTTHHHH-TTTSEEEEECCTTSTTSCCCS-----
T ss_pred ECCEEEEEEEEc-------CC--CeEEEECCCCCCccHHHH----HHHHHHHH-hcCCEEEEEcccccccccCCc-----
Confidence 488888765432 11 457789997654321112 33345556 569999999999998765311
Q ss_pred ccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccccc------------
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYD------------ 474 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~------------ 474 (571)
.....++....+..+++.-.+ ..++.++|||+||.+++.++.++|++++++|+.+|........
T Consensus 70 ---~~~~~~~~~~~~~~~i~~l~~-~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 145 (268)
T d1j1ia_ 70 ---IEYTQDRRIRHLHDFIKAMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFT 145 (268)
T ss_dssp ---SCCCHHHHHHHHHHHHHHSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSC
T ss_pred ---cccccccccccchhhHHHhhh-cccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhhhhhhhhh
Confidence 112234444444444443222 2578999999999999999999999999999877643211000
Q ss_pred c----hhhhhhcCCCCCC-h---------------------------hhhccCCcchhhccCCCcEEEEecCCCCCCChH
Q 008274 475 T----FYTEKYMGLPSED-P---------------------------VGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFR 522 (571)
Q Consensus 475 ~----~~~~~~~g~~~~~-~---------------------------~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~ 522 (571)
. ............. . ...........+.++++|+|+++|++|..++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~ 225 (268)
T d1j1ia_ 146 REGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVE 225 (268)
T ss_dssp HHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHH
T ss_pred hhhhHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCCCHH
Confidence 0 0000000000000 0 000111223446778899999999999999998
Q ss_pred HHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 523 HTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 523 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.+..+.+.+ .+++++++|++||.+ ..++.+.+.+.+.+||.+
T Consensus 226 ~~~~~~~~~----~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 226 TAYKFLDLI----DDSWGYIIPHCGHWA-MIEHPEDFANATLSFLSL 267 (268)
T ss_dssp HHHHHHHHC----TTEEEEEESSCCSCH-HHHSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC----CCCEEEEECCCCCch-HHhCHHHHHHHHHHHHcC
Confidence 888777655 568999999999986 345678899999999975
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.80 E-value=4.9e-19 Score=166.89 Aligned_cols=199 Identities=13% Similarity=0.126 Sum_probs=126.9
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+++.. .|...+..|+++||.|+++|+||+|.+.... .....+++.+.+..+++.-
T Consensus 24 ~~ivllHG~~~~~~-------~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--------~~~~~~~~~~dl~~~l~~l- 87 (277)
T d1brta_ 24 QPVVLIHGFPLSGH-------SWERQSAALLDAGYRVITYDRRGFGQSSQPT--------TGYDYDTFAADLNTVLETL- 87 (277)
T ss_dssp SEEEEECCTTCCGG-------GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS--------SCCSHHHHHHHHHHHHHHH-
T ss_pred CeEEEECCCCCCHH-------HHHHHHHHHHhCCCEEEEEeCCCCCcccccc--------cccchhhhhhhhhhhhhcc-
Confidence 55788999877643 3455678888999999999999998775321 1122344444444443331
Q ss_pred CcCCcEEEEeechHH-HHHHHHHhcCCCeeEEEEEcCccCCccccc---------c---------------hhhh----h
Q 008274 430 AKVGHIGLYGWSYGG-YLSAITLARFPDVFQCAVSGAPVTSWDGYD---------T---------------FYTE----K 480 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG-~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---------~---------------~~~~----~ 480 (571)
+.+++.++|||+|| .++..++..+|+++++++..+++....... . .+.. .
T Consensus 88 -~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (277)
T d1brta_ 88 -DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFND 166 (277)
T ss_dssp -TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred -CcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhcccc
Confidence 34689999999996 555566777899999999877654211000 0 0000 0
Q ss_pred hcCC----CCC-Chh----------------h-----hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHc
Q 008274 481 YMGL----PSE-DPV----------------G-----YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAA 534 (571)
Q Consensus 481 ~~g~----~~~-~~~----------------~-----~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~ 534 (571)
.... ... ... . ....+....+.++++|+++++|++|..++++...+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~--- 243 (277)
T d1brta_ 167 FYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKA--- 243 (277)
T ss_dssp HTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHH---
T ss_pred ccccchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcCHHHHHHHHHHh---
Confidence 0000 000 000 0 0011222346778899999999999999987654443322
Q ss_pred CCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 535 RKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 535 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
..+.+++++|++||.+ ..++.+.+.+.|.+||++
T Consensus 244 ~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 244 LPSAEYVEVEGAPHGL-LWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp CTTSEEEEETTCCTTH-HHHTHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCCch-HHhCHHHHHHHHHHHHCc
Confidence 4678999999999986 446788899999999974
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.79 E-value=7.9e-19 Score=162.76 Aligned_cols=201 Identities=15% Similarity=0.039 Sum_probs=135.4
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+++.. .|..++..|+++||.|+++|+||+|.+..... ......+....+..+.....
T Consensus 3 ~~vvllHG~~~~~~-------~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~-------~~~~~~~~~~~~~~~~~~~~ 68 (258)
T d1xkla_ 3 KHFVLVHGACHGGW-------SWYKLKPLLEAAGHKVTALDLAASGTDLRKIE-------ELRTLYDYTLPLMELMESLS 68 (258)
T ss_dssp CEEEEECCTTCCGG-------GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGG-------GCCSHHHHHHHHHHHHHTSC
T ss_pred CcEEEECCCCCCHH-------HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-------CCcchHHHHHHHhhhhhccc
Confidence 46777999876643 35667899999999999999999998753211 11124444444444444322
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchh--------------------------------
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFY-------------------------------- 477 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------------------------------- 477 (571)
...++.++|||+||.+++.++.++|++++.++..++...........
T Consensus 69 -~~~~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (258)
T d1xkla_ 69 -ADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSM 147 (258)
T ss_dssp -SSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEE
T ss_pred -ccccccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccc
Confidence 34578999999999999999999999999999887654311100000
Q ss_pred ------hhhhc-CCCC---------------CChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC
Q 008274 478 ------TEKYM-GLPS---------------EDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR 535 (571)
Q Consensus 478 ------~~~~~-g~~~---------------~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~ 535 (571)
..... .... .................+++|+++++|++|..++++....+.+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---- 223 (258)
T d1xkla_ 148 FFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI---- 223 (258)
T ss_dssp ECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH----
T ss_pred cccHHHHHHHhhhcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHC----
Confidence 00000 0000 000001111222334556789999999999999999888887766
Q ss_pred CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 536 KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 536 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+.++++++++||.. ..++.+.+.+.|.+|++++
T Consensus 224 ~~~~~~~i~~~gH~~-~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 224 GVTEAIEIKGADHMA-MLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp CCSEEEEETTCCSCH-HHHSHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCch-HHhCHHHHHHHHHHHHHhc
Confidence 467899999999986 4467889999999999886
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.79 E-value=1.1e-18 Score=154.47 Aligned_cols=180 Identities=9% Similarity=-0.006 Sum_probs=119.9
Q ss_pred EEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCC
Q 008274 351 TLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLA 430 (571)
Q Consensus 351 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 430 (571)
-||++||..++.. .. .+..+++.|+++||.|+++|+||++... .+|....++.+.. .
T Consensus 3 ~V~~vHG~~~~~~--~~---~~~~l~~~L~~~G~~v~~~d~p~~~~~~---------------~~~~~~~l~~~~~---~ 59 (186)
T d1uxoa_ 3 QVYIIHGYRASST--NH---WFPWLKKRLLADGVQADILNMPNPLQPR---------------LEDWLDTLSLYQH---T 59 (186)
T ss_dssp EEEEECCTTCCTT--ST---THHHHHHHHHHTTCEEEEECCSCTTSCC---------------HHHHHHHHHTTGG---G
T ss_pred EEEEECCCCCCcc--hh---HHHHHHHHHHhCCCEEEEeccCCCCcch---------------HHHHHHHHHHHHh---c
Confidence 4788999766532 12 2455688999999999999999876432 2333333333332 3
Q ss_pred cCCcEEEEeechHHHHHHHHHhcCCCee--EEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcE
Q 008274 431 KVGHIGLYGWSYGGYLSAITLARFPDVF--QCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKL 508 (571)
Q Consensus 431 d~~~i~l~G~S~GG~~a~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~ 508 (571)
...++.|+||||||++++.++.+++... .+++..++........... ..+ .....+.....++.+|+
T Consensus 60 ~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~p~ 128 (186)
T d1uxoa_ 60 LHENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQML-DEF----------TQGSFDHQKIIESAKHR 128 (186)
T ss_dssp CCTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGG-GGG----------TCSCCCHHHHHHHEEEE
T ss_pred cCCCcEEEEechhhHHHHHHHHhCCccceeeEEeecccccccchhhhhh-hhh----------hcccccccccccCCCCE
Confidence 4578999999999999999999988653 4444444443321111110 011 11112223344566899
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCC--CCcHHHHHHHHHHHHHH
Q 008274 509 LLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRR--HRDRIYMEERIWEFIER 569 (571)
Q Consensus 509 lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~~~i~~fl~~ 569 (571)
|++||++|++||++.++.+++.+ +.+++++|++||.+.. ......+.+.+.+||.+
T Consensus 129 lvi~g~~D~~vp~~~~~~l~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 129 AVIASKDDQIVPFSFSKDLAQQI-----DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHT-----TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred EEEecCCCCCCCHHHHHHHHHHc-----CCEEEEeCCCCCcCccccCcccHHHHHHHHHHHcC
Confidence 99999999999999999998876 3689999999997632 23345678888888864
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.79 E-value=7.7e-19 Score=158.34 Aligned_cols=180 Identities=14% Similarity=0.125 Sum_probs=126.2
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCC-------CCchhHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGR-------IDAEDQLT 419 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~-------~~~~D~~~ 419 (571)
+++|+||++||.+++.. . +..+++.|+. ++.+++++.+.....+..+... ...+. ....++.+
T Consensus 21 ~~~p~vv~lHG~g~~~~---~----~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~ 90 (209)
T d3b5ea1 21 ESRECLFLLHGSGVDET---T----LVPLARRIAP-TATLVAARGRIPQEDGFRWFER--IDPTRFEQKSILAETAAFAA 90 (209)
T ss_dssp SCCCEEEEECCTTBCTT---T----THHHHHHHCT-TSEEEEECCSEEETTEEESSCE--EETTEECHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCHH---H----HHHHHHHhcc-CcEEEeeccCcCcccCcccccc--CCccccchhhHHHHHHHHHH
Confidence 56899999999766432 2 3345566654 7888888765321111100000 00000 01345666
Q ss_pred HHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcch
Q 008274 420 GAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMH 499 (571)
Q Consensus 420 ~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~ 499 (571)
.|+.+.++..+|.+||+|+|+|+||++++.++.++|++|+++++.+|..... +..
T Consensus 91 ~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~-------------------------~~~ 145 (209)
T d3b5ea1 91 FTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD-------------------------HVP 145 (209)
T ss_dssp HHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS-------------------------SCC
T ss_pred HHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCccccc-------------------------ccc
Confidence 6777777767899999999999999999999999999999999988754210 001
Q ss_pred hhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 500 HVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 500 ~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
.....++|++++||+.|.+++ ..+.++.+.|++.|.++++..+++ +|++. ....+.+.+||.
T Consensus 146 ~~~~~~~p~~~~~G~~D~~~~-~~~~~~~~~l~~~G~~v~~~~~~g-gH~i~-----~~~~~~~~~wl~ 207 (209)
T d3b5ea1 146 ATDLAGIRTLIIAGAADETYG-PFVPALVTLLSRHGAEVDARIIPS-GHDIG-----DPDAAIVRQWLA 207 (209)
T ss_dssp CCCCTTCEEEEEEETTCTTTG-GGHHHHHHHHHHTTCEEEEEEESC-CSCCC-----HHHHHHHHHHHH
T ss_pred ccccccchheeeeccCCCccC-HHHHHHHHHHHHCCCCeEEEEECC-CCCCC-----HHHHHHHHHHhC
Confidence 122345799999999999987 567889999999999999999998 79983 233466788885
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.78 E-value=1.1e-19 Score=172.28 Aligned_cols=202 Identities=15% Similarity=0.136 Sum_probs=131.3
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|...+.. ...+.++||.|+++|+||+|.+.......... ....+|+.+.++.+
T Consensus 31 ~~ivllHG~~~~~~---~~~~~~~~-l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~---~~~~~~i~~li~~l----- 98 (283)
T d2rhwa1 31 ETVIMLHGGGPGAG---GWSNYYRN-VGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG---LVNARAVKGLMDAL----- 98 (283)
T ss_dssp SEEEEECCCSTTCC---HHHHHTTT-HHHHHHTTCEEEEECCTTSTTSCCCCCSSCHH---HHHHHHHHHHHHHH-----
T ss_pred CeEEEECCCCCChh---HHHHHHHH-HHHHHHCCCEEEEEeCCCCccccccccccccc---chhhhhcccccccc-----
Confidence 67788999776543 33322222 34566899999999999998764321100000 00123444444443
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc----c-----cc--------------hhhhhhcCCCC
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG----Y-----DT--------------FYTEKYMGLPS 486 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~----~-----~~--------------~~~~~~~g~~~ 486 (571)
+.+++.++|||+||.+++.++.++|++++++++.+|..-... . .. ...........
T Consensus 99 -~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (283)
T d2rhwa1 99 -DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQS 177 (283)
T ss_dssp -TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGG
T ss_pred -cccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHHHHHhhcccc
Confidence 446899999999999999999999999999998876431100 0 00 00000000000
Q ss_pred -CChh--------------------------hhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCee
Q 008274 487 -EDPV--------------------------GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539 (571)
Q Consensus 487 -~~~~--------------------------~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 539 (571)
...+ .....+....+.++++|+|+++|++|..++++.+..+.+.+ .+++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~----~~~~ 253 (283)
T d2rhwa1 178 LITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI----DDAR 253 (283)
T ss_dssp GCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHS----SSEE
T ss_pred cCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHHHhC----CCCE
Confidence 0000 00112334456778999999999999999999988887765 5689
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+++++++||.+ ..++.+.+.+.+.+||++
T Consensus 254 ~~~i~~~gH~~-~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 254 LHVFSKCGHWA-QWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp EEEESSCCSCH-HHHTHHHHHHHHHHHHHH
T ss_pred EEEECCCCCch-HHhCHHHHHHHHHHHHhC
Confidence 99999999976 346678899999999986
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.78 E-value=1.5e-19 Score=172.01 Aligned_cols=212 Identities=14% Similarity=0.071 Sum_probs=141.9
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|.++++..+.|++ .|+||++||.+.+.. . |...++.|+ .||.|+++|+||+|.+...-
T Consensus 15 ~g~~i~y~~~G~~~-------~p~lvllHG~~~~~~---~----~~~~~~~L~-~~~~vi~~d~~G~G~S~~~~------ 73 (291)
T d1bn7a_ 15 LGERMHYVDVGPRD-------GTPVLFLHGNPTSSY---L----WRNIIPHVA-PSHRCIAPDLIGMGKSDKPD------ 73 (291)
T ss_dssp TTEEEEEEEESCSS-------SSCEEEECCTTCCGG---G----GTTTHHHHT-TTSCEEEECCTTSTTSCCCS------
T ss_pred CCEEEEEEEeCCCC-------CCeEEEECCCCCCHH---H----HHHHHHHHh-cCCEEEEEeCCCCccccccc------
Confidence 78889988776543 256888999877643 2 344567775 59999999999998875311
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc------------
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT------------ 475 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~------------ 475 (571)
.....+++.+.+..++++- +..++.++|||+||.+++.++.++|++++++++.++.........
T Consensus 74 --~~~~~~~~~~~l~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (291)
T d1bn7a_ 74 --LDYFFDDHVRYLDAFIEAL--GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAF 149 (291)
T ss_dssp --CCCCHHHHHHHHHHHHHHT--TCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHH
T ss_pred --cccchhHHHHHHhhhhhhh--ccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHH
Confidence 1223555666666555542 456899999999999999999999999999888654432110000
Q ss_pred --------------hhhh----hhcCCCCCCh--hhhc--------------------cC-----------CcchhhccC
Q 008274 476 --------------FYTE----KYMGLPSEDP--VGYE--------------------YS-----------SVMHHVHKM 504 (571)
Q Consensus 476 --------------~~~~----~~~g~~~~~~--~~~~--------------------~~-----------s~~~~~~~~ 504 (571)
.+.. .....+.... ..+. .. .....+.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 229 (291)
T d1bn7a_ 150 RTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQS 229 (291)
T ss_dssp TSTTHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHC
T ss_pred hhhhhHHHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcC
Confidence 0000 0000000000 0000 00 011224667
Q ss_pred CCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 505 KGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 505 ~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++|+|+++|++|..++++....+.+.+ .+.++++++++||.+ ..+..+.+.+.+.+||+.
T Consensus 230 ~~P~lii~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~v~~~i~~fL~~ 289 (291)
T d1bn7a_ 230 PVPKLLFWGTPGVLIPPAEAARLAESL----PNCKTVDIGPGLHYL-QEDNPDLIGSEIARWLPG 289 (291)
T ss_dssp CSCEEEEEEEECSSSCHHHHHHHHHHS----TTEEEEEEEEESSCG-GGTCHHHHHHHHHHHSGG
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHHC----CCCEEEEECCCCCch-HHhCHHHHHHHHHHHHHh
Confidence 899999999999999999888887765 567999999999976 456678899999999864
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.78 E-value=1.4e-18 Score=161.17 Aligned_cols=199 Identities=15% Similarity=-0.022 Sum_probs=132.5
Q ss_pred EEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCc
Q 008274 352 LISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAK 431 (571)
Q Consensus 352 vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 431 (571)
.|++||.+++.. .|..++..|+++||.|+++|+||+|.+..... .....++..+.+..+..+. ..
T Consensus 5 ~vliHG~~~~~~-------~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~-------~~~~~~~~~~~l~~~~~~~-~~ 69 (256)
T d3c70a1 5 FVLIHTICHGAW-------IWHKLKPLLEALGHKVTALDLAASGVDPRQIE-------EIGSFDEYSEPLLTFLEAL-PP 69 (256)
T ss_dssp EEEECCTTCCGG-------GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHTHHHHHHHHHS-CT
T ss_pred EEEeCCCCCCHH-------HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-------CCCCHHHHHHHhhhhhhhh-cc
Confidence 377999877643 35567899999999999999999998753211 1122445555554443331 13
Q ss_pred CCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccch-----------------------------------
Q 008274 432 VGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTF----------------------------------- 476 (571)
Q Consensus 432 ~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----------------------------------- 476 (571)
.+++.++|||+||.+++.++.++|++++++|..++..........
T Consensus 70 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (256)
T d3c70a1 70 GEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGF 149 (256)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCH
T ss_pred ccceeecccchHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhh
Confidence 568999999999999999999999999999887765421110000
Q ss_pred --hhhhhcCCC---------------CCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCee
Q 008274 477 --YTEKYMGLP---------------SEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539 (571)
Q Consensus 477 --~~~~~~g~~---------------~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 539 (571)
......... ..................+++|+++++|++|..++++....+.+.+ .+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~----p~~~ 225 (256)
T d3c70a1 150 TLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY----KPDK 225 (256)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS----CCSE
T ss_pred hhhhhhhhhhcchhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHC----CCCE
Confidence 000000000 0000111111222334445689999999999999988777776554 5778
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+++++++||.+ ..++.+.+.+.+.+|++++
T Consensus 226 ~~~i~~agH~~-~~e~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 226 VYKVEGGDHKL-QLTKTKEIAEILQEVADTY 255 (256)
T ss_dssp EEECCSCCSCH-HHHSHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCch-HHhCHHHHHHHHHHHHHhc
Confidence 99999999986 4567888999999999875
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=8.3e-20 Score=171.67 Aligned_cols=211 Identities=13% Similarity=0.072 Sum_probs=142.6
Q ss_pred CCCCeEEEEEcCCC-cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC
Q 008274 316 LEPPDIVQIQANDG-TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT 394 (571)
Q Consensus 316 ~~~~~~~~~~~~dg-~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 394 (571)
..+.+.+.+++.|| .++.++++.|.+.+ +.+++|+|+++||++....... ....+..+.+|+.|+++++++.
T Consensus 10 ~~~~~~~~~~s~dg~~~~~~~v~~P~~~~-~~~~yPvi~~lhG~~~~~~~~~------~~~~~~~~~~~~~vV~v~~~~~ 82 (265)
T d2gzsa1 10 FYHFSATSFDSVDGTRHYRVWTAVPNTTA-PASGYPILYMLDGNAVMDRLDD------ELLKQLSEKTPPVIVAVGYQTN 82 (265)
T ss_dssp SEEEEEEEEECTTSSCEEEEEEEEESSCC-CTTCEEEEEESSHHHHHHHCCH------HHHHHHTTSCCCEEEEEEESSS
T ss_pred cceeEEEEEEcCCCCEEEEEEEEcCCCCC-CCCCceEEEEecCcchhhhHHH------HHHHHHHhcCCCeEEEecCCCC
Confidence 44578899999998 57999999999874 4579999999999754433111 1123455679999999999987
Q ss_pred CCChhhhHHHHhccC-----C---C-------CCch-----hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC
Q 008274 395 ARRGLKFEASIKHNC-----G---R-------IDAE-----DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF 454 (571)
Q Consensus 395 ~~~~~~~~~~~~~~~-----~---~-------~~~~-----D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~ 454 (571)
...+..........+ . . .... ...+.+.++.++..+|+.+++|+|+|+||++++.++.+
T Consensus 83 ~~~~~~~r~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~- 161 (265)
T d2gzsa1 83 LPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS- 161 (265)
T ss_dssp SSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-
T ss_pred CcCcccccccccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc-
Confidence 655433221111000 0 0 0001 11223445555566899999999999999999988775
Q ss_pred CCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCC--------CCCCChHHHHH
Q 008274 455 PDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMI--------DENVHFRHTAR 526 (571)
Q Consensus 455 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~--------D~~v~~~~~~~ 526 (571)
++.|.++++.+|...|... ..+...+++........|+++.+|+. |..+++.++++
T Consensus 162 ~~~f~~~~a~s~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~ 225 (265)
T d2gzsa1 162 SSYFRSYYSASPSLGRGYD----------------ALLSRVTAVEPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHT 225 (265)
T ss_dssp CSSCSEEEEESGGGSTTHH----------------HHHHHHHTSCTTTTTTCEEEEEECCC-----------CHHHHHHH
T ss_pred CcccCEEEEECCcccccch----------------hhhhccccccccccCCCcEEEEcCCcccccccccccchhHHHHHH
Confidence 6777888888887654211 11122222333444556777777766 67788999999
Q ss_pred HHHHHHHcCCCeeEEEcCCCCCCC
Q 008274 527 LINALVAARKPYEILIFPDERHMP 550 (571)
Q Consensus 527 ~~~~l~~~~~~~~~~~~~~~~H~~ 550 (571)
++++|+++|+++++.+||+++|+.
T Consensus 226 l~~~L~~~g~~~~~~~~pG~~Hg~ 249 (265)
T d2gzsa1 226 TLTILKDKGVNAVFWDFPNLGHGP 249 (265)
T ss_dssp HHHHHHHTTCCEEEEECTTCCHHH
T ss_pred HHHHHHHCCCCEEEEEcCCCCcch
Confidence 999999999999999999999974
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.78 E-value=2.3e-19 Score=166.40 Aligned_cols=227 Identities=10% Similarity=-0.019 Sum_probs=145.8
Q ss_pred CCCCCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCC----cEEEE
Q 008274 314 LQLEPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG----ILVWK 388 (571)
Q Consensus 314 ~~~~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G----~~v~~ 388 (571)
.....++.+.+.+. .|.++.+++|.|.+. +++++|+||++||++..... ........+.+.| ++++.
T Consensus 10 ~~~~~~~~~~~~S~~lg~~~~~~v~~P~~~--~~~~~Pvvv~lhG~~~~~~~------~~~~~l~~l~~~~~~~~~i~v~ 81 (246)
T d3c8da2 10 APEIPAKEIIWKSERLKNSRRVWIFTTGDV--TAEERPLAVLLDGEFWAQSM------PVWPVLTSLTHRQQLPPAVYVL 81 (246)
T ss_dssp CCSSCCEEEEEEETTTTEEEEEEEEEC-------CCCCEEEESSHHHHHHTS------CCHHHHHHHHHTTSSCSCEEEE
T ss_pred CCCCCcEEEEEECCCCCCEEEEEEEECCCC--CCCCCCEEEEeCCcchhccC------cHHHHHHHHHHhCCCCceEEee
Confidence 34567788888885 478899999999875 34689999999997543221 1222345566555 44555
Q ss_pred ECCCCCCCChhhhHHHHhccCCCCCchhHHHH-HHHHHHc--CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcC
Q 008274 389 LDNRGTARRGLKFEASIKHNCGRIDAEDQLTG-AEWLIKQ--GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGA 465 (571)
Q Consensus 389 ~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~--~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~ 465 (571)
++... ........ ..+......+.+. +.++.+. ..+|+++++|+|+|+||++|+.++.++|++|+++++.+
T Consensus 82 ~~~~~----~~~~~~~~--~~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~s 155 (246)
T d3c8da2 82 IDAID----TTHRAHEL--PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQS 155 (246)
T ss_dssp ECCCS----HHHHHHHS--SSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEES
T ss_pred ccccc----cccccccc--CccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCC
Confidence 54331 11111110 0000001112222 2223232 34688999999999999999999999999999999999
Q ss_pred ccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCC
Q 008274 466 PVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD 545 (571)
Q Consensus 466 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 545 (571)
|..++..... .....+....+.........|+++.+|+.|..+ ..++++|+++|+++|.++++.++|+
T Consensus 156 g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~G~~D~~~-~~~~~~l~~~L~~~g~~~~~~~~~G 223 (246)
T d3c8da2 156 GSYWWPHRGG-----------QQEGVLLEKLKAGEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG 223 (246)
T ss_dssp CCTTTTCTTS-----------SSCCHHHHHHHTTSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC
T ss_pred cccccccCCc-----------cchHHHHHHhhhhhhhccCCCeEEEecCCCcch-hHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 9876532211 111222333344455566789999999999876 5788999999999999999999998
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 546 ERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 546 ~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
||.+. .........+.||-+.
T Consensus 224 -gH~~~---~W~~~l~~~l~~l~~~ 244 (246)
T d3c8da2 224 -GHDAL---CWRGGLMQGLIDLWQP 244 (246)
T ss_dssp -CSCHH---HHHHHHHHHHHHHHGG
T ss_pred -CCChH---HHHHHHHHHHHHHHHh
Confidence 89762 3445555666666554
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.77 E-value=3e-18 Score=162.86 Aligned_cols=240 Identities=13% Similarity=0.058 Sum_probs=159.0
Q ss_pred CCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 318 PPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 318 ~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
.++.+++.++ .|.+++..++.|. +++|+|+++||+++... ...|.. .....+.+.+.|+++++++..+.+.
T Consensus 8 ~v~~~~~~s~~~~r~~~~~v~~p~------~~~Pvl~llhG~~~~~d-~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~ 79 (288)
T d1sfra_ 8 PVEYLQVPSPSMGRDIKVQFQSGG------ANSPALYLLDGLRAQDD-FSGWDI-NTPAFEWYDQSGLSVVMPVGGQSSF 79 (288)
T ss_dssp CCEEEEEEETTTTEEEEEEEECCS------TTBCEEEEECCTTCCSS-SCHHHH-HCCHHHHHTTSSCEEEEECCCTTCT
T ss_pred EEEEEEEECCCCCcEEEEEEeCCC------CCceEEEEcCCCCCCCc-chhhhh-hccHHHHHHhCCCEEEEeccCCCCC
Confidence 3567777764 5678888887764 47899999999765432 112321 1224677889999999999877654
Q ss_pred ChhhhHHHH-hccCCCCCch--hHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc
Q 008274 397 RGLKFEASI-KHNCGRIDAE--DQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY 473 (571)
Q Consensus 397 ~~~~~~~~~-~~~~~~~~~~--D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~ 473 (571)
....+.... .........+ -+.+.+.++.++..+|++|++|+|+|+||++|+.+++++|++|+++++.+|..+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~~~~ 159 (288)
T d1sfra_ 80 YSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQA 159 (288)
T ss_dssp TCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTST
T ss_pred CccccCcccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCccccccc
Confidence 332211110 0000001111 2456677888877789999999999999999999999999999999999998875432
Q ss_pred cchh-------------hhhhcCCCCCChhhhccCCcchhhccC---CCcEEEEecCCCCCCCh--------------HH
Q 008274 474 DTFY-------------TEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDENVHF--------------RH 523 (571)
Q Consensus 474 ~~~~-------------~~~~~g~~~~~~~~~~~~s~~~~~~~~---~~p~lli~G~~D~~v~~--------------~~ 523 (571)
.... .....+.+ +...+...+|...+++. ..++++.+|..|..++. .+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~~~~~e~~~~~~ 237 (288)
T d1sfra_ 160 MGPTLIGLAMGDAGGYKASDMWGPK--EDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTS 237 (288)
T ss_dssp THHHHHHHHHHHTTSCCHHHHHCST--TSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhcccccHhhhcCCc--chhhhHhcCHHHHHHHhhhcCCeEEEEeCCCCCCCccccccccchhHHHHHHH
Confidence 2110 01111222 12345566776666554 46899999999987763 57
Q ss_pred HHHHHHHHHHcCCCeeEEEcCCC-CCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 524 TARLINALVAARKPYEILIFPDE-RHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 524 ~~~~~~~l~~~~~~~~~~~~~~~-~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+.++.++|.+.|++..+..++++ +|.+.. ......+.+.||.+.
T Consensus 238 ~~~l~~~l~~~g~~~~~~~~~~~G~H~w~~---w~~~l~~~l~~l~~a 282 (288)
T d1sfra_ 238 NIKFQDAYNAGGGHNGVFDFPDSGTHSWEY---WGAQLNAMKPDLQRA 282 (288)
T ss_dssp HHHHHHHHHHTTCCSEEEECCSCCCSSHHH---HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHCCCCeEEEEECCCCccChhH---HHHHHHHHHHHHHHh
Confidence 78899999999999999999865 697632 222334455666553
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.76 E-value=5.7e-18 Score=163.09 Aligned_cols=127 Identities=17% Similarity=0.141 Sum_probs=90.9
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.+.-.+.+.||.++++..+..++ -|.||++||++++.. .|. . ...+.+.||.|+++|.||+|.+.
T Consensus 11 ~~~~~i~~~dg~~i~y~~~G~~~-------g~pvvllHG~~g~~~---~~~----~-~~~~l~~~~~Vi~~D~rG~G~S~ 75 (313)
T d1azwa_ 11 YQQGSLKVDDRHTLYFEQCGNPH-------GKPVVMLHGGPGGGC---NDK----M-RRFHDPAKYRIVLFDQRGSGRST 75 (313)
T ss_dssp SEEEEEECSSSCEEEEEEEECTT-------SEEEEEECSTTTTCC---CGG----G-GGGSCTTTEEEEEECCTTSTTSB
T ss_pred CCCCEEEeCCCcEEEEEEecCCC-------CCEEEEECCCCCCcc---chH----H-HhHHhhcCCEEEEEeccccCCCC
Confidence 37788888999999888775332 255677999887643 222 1 23344679999999999999875
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
... ......+.++.+.+..++++- ..+++.|+|||+||.+++.++.++|+++++++..++..
T Consensus 76 ~~~------~~~~~~~~~~~~dl~~~~~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~ 137 (313)
T d1azwa_ 76 PHA------DLVDNTTWDLVADIERLRTHL--GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp STT------CCTTCCHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred ccc------cccchhHHHHHHHHHHHHHhh--ccccceeEEecCCcHHHHHHHHHhhhceeeeeEecccc
Confidence 321 112223555555565555543 44689999999999999999999999999998877654
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.76 E-value=5.9e-18 Score=160.74 Aligned_cols=222 Identities=12% Similarity=0.040 Sum_probs=139.5
Q ss_pred CeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCCh
Q 008274 319 PDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRG 398 (571)
Q Consensus 319 ~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~ 398 (571)
.+..+++. +|.++++.... .-|+||++||.+++.. .|...+..|++ +|.|+++|+||+|.+.
T Consensus 8 ~~~~~~~~-~~~~l~y~~~G---------~gp~vv~lHG~~~~~~-------~~~~~~~~l~~-~~~vi~~D~~G~G~s~ 69 (293)
T d1ehya_ 8 FKHYEVQL-PDVKIHYVREG---------AGPTLLLLHGWPGFWW-------EWSKVIGPLAE-HYDVIVPDLRGFGDSE 69 (293)
T ss_dssp SCEEEEEC-SSCEEEEEEEE---------CSSEEEEECCSSCCGG-------GGHHHHHHHHT-TSEEEEECCTTSTTSC
T ss_pred CcceEEEE-CCEEEEEEEEC---------CCCeEEEECCCCCCHH-------HHHHHHHHHhc-CCEEEEecCCcccCCc
Confidence 35567777 56778766432 1267889999876543 34556777755 8999999999998664
Q ss_pred hhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc------
Q 008274 399 LKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG------ 472 (571)
Q Consensus 399 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~------ 472 (571)
..... .......+++.+.+..+.+.- +.+++.++||||||.+++.++.++|+++.++++.+|......
T Consensus 70 ~~~~~----~~~~~~~~~~a~~~~~~~~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 143 (293)
T d1ehya_ 70 KPDLN----DLSKYSLDKAADDQAALLDAL--GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGL 143 (293)
T ss_dssp CCCTT----CGGGGCHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-------
T ss_pred ccccc----ccccccchhhhhHHHhhhhhc--CccccccccccccccchhcccccCccccceeeeeeccCccccchhhhh
Confidence 32111 001112445555555554432 456899999999999999999999999999999887532100
Q ss_pred -----------cc---------------chhhhhhc---CC-CC-CChhh--------------------hc----cC-C
Q 008274 473 -----------YD---------------TFYTEKYM---GL-PS-EDPVG--------------------YE----YS-S 496 (571)
Q Consensus 473 -----------~~---------------~~~~~~~~---g~-~~-~~~~~--------------------~~----~~-s 496 (571)
.. ..+....+ .. .. ...+. +. .. .
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (293)
T d1ehya_ 144 GHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAA 223 (293)
T ss_dssp ----CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCC
T ss_pred hhhhhhhhhhhhccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccchh
Confidence 00 00000000 00 00 00000 00 00 0
Q ss_pred c--chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008274 497 V--MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIE 568 (571)
Q Consensus 497 ~--~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 568 (571)
. ......++.|+|+++|++|..++.+...++.+.+ ..++++++++++||.+ ..++.+.+.+.|.+||+
T Consensus 224 ~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~-~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 224 LWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKY---YSNYTMETIEDCGHFL-MVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp CCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHH---BSSEEEEEETTCCSCH-HHHCHHHHHHHHHHHCC
T ss_pred hhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHHHHh---CCCCEEEEECCCCCch-HHHCHHHHHHHHHHhhC
Confidence 0 0112346689999999999999988766655544 4688999999999976 44667888888888873
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.75 E-value=1.8e-18 Score=163.29 Aligned_cols=198 Identities=15% Similarity=0.134 Sum_probs=124.4
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|...+..|.++||.|+++|+||+|.+.... .....+++.+.+..+++.-
T Consensus 24 ~~illlHG~~~~~~-------~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~--------~~~~~~~~~~di~~~i~~l- 87 (279)
T d1hkha_ 24 QPVVLIHGYPLDGH-------SWERQTRELLAQGYRVITYDRRGFGGSSKVN--------TGYDYDTFAADLHTVLETL- 87 (279)
T ss_dssp EEEEEECCTTCCGG-------GGHHHHHHHHHTTEEEEEECCTTSTTSCCCS--------SCCSHHHHHHHHHHHHHHH-
T ss_pred CeEEEECCCCCCHH-------HHHHHHHHHHHCCCEEEEEechhhCCccccc--------cccchhhhhhhhhhhhhhc-
Confidence 66788999877643 3455677888999999999999999875321 1123444444444444331
Q ss_pred CcCCcEEEEeechHH-HHHHHHHhcCCCeeEEEEEcCccCCcccc-------------c-----------chhh---hh-
Q 008274 430 AKVGHIGLYGWSYGG-YLSAITLARFPDVFQCAVSGAPVTSWDGY-------------D-----------TFYT---EK- 480 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG-~~a~~~~~~~~~~~~~~v~~~~~~~~~~~-------------~-----------~~~~---~~- 480 (571)
+.+++.++|||+|| .++..++..+|++++++++.+++...... . ..+. ..
T Consensus 88 -~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (279)
T d1hkha_ 88 -DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNF 166 (279)
T ss_dssp -TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred -CcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhhhhhhh
Confidence 44689999999996 55666677789999998887654321100 0 0000 00
Q ss_pred -----hcCCCCC---------------Chhhhc-----c---CCcchhhccCCCcEEEEecCCCCCCChHH-HHHHHHHH
Q 008274 481 -----YMGLPSE---------------DPVGYE-----Y---SSVMHHVHKMKGKLLLVHGMIDENVHFRH-TARLINAL 531 (571)
Q Consensus 481 -----~~g~~~~---------------~~~~~~-----~---~s~~~~~~~~~~p~lli~G~~D~~v~~~~-~~~~~~~l 531 (571)
....... ....+. . .+.+..+.++++|+|+++|++|..++.+. .+.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~- 245 (279)
T d1hkha_ 167 YNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQA- 245 (279)
T ss_dssp HTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHH-
T ss_pred cccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHHHHHHHHHh-
Confidence 0000000 000000 0 01123345678999999999999998754 3444433
Q ss_pred HHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 532 VAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 532 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
-.+++++++|++||.+ ..++..++.+.|.+||++
T Consensus 246 ---~p~~~~~~i~~~gH~~-~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 246 ---VPEADYVEVEGAPHGL-LWTHADEVNAALKTFLAK 279 (279)
T ss_dssp ---CTTSEEEEETTCCTTH-HHHTHHHHHHHHHHHHHC
T ss_pred ---CCCCEEEEECCCCCch-HHhCHHHHHHHHHHHHCc
Confidence 3567899999999986 346778899999999974
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.75 E-value=2.3e-18 Score=154.66 Aligned_cols=183 Identities=16% Similarity=0.110 Sum_probs=125.6
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
+..|+||++||++++.. . +...++.++ .++.|+.++.+..++....+. .....+..+..++...++.+..
T Consensus 15 ~~~P~vi~lHG~G~~~~---~----~~~~~~~l~-~~~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 84 (203)
T d2r8ba1 15 AGAPLFVLLHGTGGDEN---Q----FFDFGARLL-PQATILSPVGDVSEHGAARFF--RRTGEGVYDMVDLERATGKMAD 84 (203)
T ss_dssp TTSCEEEEECCTTCCHH---H----HHHHHHHHS-TTSEEEEECCSEEETTEEESS--CBCGGGCBCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHH---H----HHHHHHHhc-cCCeEEEeccccccccccccc--cccCccccchhHHHHHHHHHHH
Confidence 56799999999766532 2 233455554 478888887664321111000 0011112223344333333321
Q ss_pred ---c--CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhh
Q 008274 427 ---Q--GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHV 501 (571)
Q Consensus 427 ---~--~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~ 501 (571)
. ..++.++++++|+|+||.+++.++..+|+.+.++++.+|....... ...
T Consensus 85 ~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~-------------------------~~~ 139 (203)
T d2r8ba1 85 FIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK-------------------------ISP 139 (203)
T ss_dssp HHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC-------------------------CCC
T ss_pred HHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc-------------------------ccc
Confidence 1 2357899999999999999999999999999999998876432100 011
Q ss_pred ccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 502 HKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 502 ~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.....|++++||++|.+||++++++++++|++.|.++++..|++ ||++. ....+.+.+||.+|
T Consensus 140 ~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~~-----~~~~~~~~~wl~~~ 202 (203)
T d2r8ba1 140 AKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPG-GHEIR-----SGEIDAVRGFLAAY 202 (203)
T ss_dssp CCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESS-CSSCC-----HHHHHHHHHHHGGG
T ss_pred ccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECC-CCcCC-----HHHHHHHHHHHHhc
Confidence 23357999999999999999999999999999999999999987 79973 23467789999875
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=3.1e-18 Score=159.60 Aligned_cols=192 Identities=18% Similarity=0.189 Sum_probs=126.5
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|.||++||.+.+.. .|...+..|+ .||.|+++|+||+|.+.. .......| .++.+...
T Consensus 12 ~~lvllHG~~~~~~-------~~~~~~~~L~-~~~~vi~~D~~G~G~S~~---------~~~~~~~d---~~~~~~~~-- 69 (256)
T d1m33a_ 12 VHLVLLHGWGLNAE-------VWRCIDEELS-SHFTLHLVDLPGFGRSRG---------FGALSLAD---MAEAVLQQ-- 69 (256)
T ss_dssp SEEEEECCTTCCGG-------GGGGTHHHHH-TTSEEEEECCTTSTTCCS---------CCCCCHHH---HHHHHHTT--
T ss_pred CeEEEECCCCCCHH-------HHHHHHHHHh-CCCEEEEEeCCCCCCccc---------cccccccc---cccccccc--
Confidence 56778999776532 2445577775 589999999999987642 11222333 33333333
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc------cc--------c-------hhhhhhc-----C
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG------YD--------T-------FYTEKYM-----G 483 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~------~~--------~-------~~~~~~~-----g 483 (571)
..+++.++|||+||.+++.++.++|+.+++++...+...... .. . ...++++ .
T Consensus 70 -~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (256)
T d1m33a_ 70 -APDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMG 148 (256)
T ss_dssp -SCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred -cccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhhhcc
Confidence 246799999999999999999999999999887764332110 00 0 0000000 0
Q ss_pred -----------------CCCCChh-------hhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCee
Q 008274 484 -----------------LPSEDPV-------GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYE 539 (571)
Q Consensus 484 -----------------~~~~~~~-------~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 539 (571)
.+..... .+...+....++++++|+|+++|++|..+|++....+.+.+ .+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~~~----~~~~ 224 (256)
T d1m33a_ 149 TETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW----PHSE 224 (256)
T ss_dssp STTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTC----TTCE
T ss_pred ccchhhHHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHHHHHHC----CCCE
Confidence 0000010 11122334456788999999999999999988776665433 5679
Q ss_pred EEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 540 ILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 540 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
+++++++||.+ ..++.+++.+.+.+|+++
T Consensus 225 ~~~i~~~gH~~-~~e~p~~~~~~l~~fl~~ 253 (256)
T d1m33a_ 225 SYIFAKAAHAP-FISHPAEFCHLLVALKQR 253 (256)
T ss_dssp EEEETTCCSCH-HHHSHHHHHHHHHHHHTT
T ss_pred EEEECCCCCch-HHHCHHHHHHHHHHHHHH
Confidence 99999999976 456788999999999975
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=7e-16 Score=144.58 Aligned_cols=214 Identities=17% Similarity=0.150 Sum_probs=149.5
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+.|||||++|||++..... ..+++++..++..++++.
T Consensus 42 ~sP~wSPDGk~IAf~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~-------- 80 (269)
T d2hqsa1 42 MSPAWSPDGSKLAYVTFESGR---------------------------------SALVIQTLANGAVRQVAS-------- 80 (269)
T ss_dssp EEEEECTTSSEEEEEECTTSS---------------------------------CEEEEEETTTCCEEEEEC--------
T ss_pred eeeEECCCCCEEEEEEeeccC---------------------------------cceeeeecccCceeEEee--------
Confidence 368899999999998654322 256888999988887754
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecC
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKT 185 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~ 185 (571)
.......+.|||||+.+++...+.. ...+........+............. +.. ...++.+++.+.+.
T Consensus 81 -~~~~~~~~~~spdg~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~ 148 (269)
T d2hqsa1 81 -FPRHNGAPAFSPDGSKLAFALSKTG-SLNLYVMDLASGQIRQVTDGRSNNTE-------PTW---FPDSQNLAFTSDQA 148 (269)
T ss_dssp -CSSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTTCCEEECCCCSSCEEE-------EEE---CTTSSEEEEEECTT
T ss_pred -eecccccceecCCCCeeeEeeecCC-ccceeecccccccceeeeeccccccc-------ccc---ccccccceeccccc
Confidence 3445556899999999988876553 34566666665554433221111110 100 12344577788889
Q ss_pred CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC-ceEE
Q 008274 186 GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK-GKHV 264 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~-g~~~ 264 (571)
|..+|++.+++++...+++........+. |+++|+.+++.+...+. ..++.++. .+. . .+++... ....
T Consensus 149 g~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~spdg~~~~~~~~~~~~--~~i~~~~~--~~~----~-~~~~~~~~~~~~ 218 (269)
T d2hqsa1 149 GRPQVYKVNINGGAPQRITWEGSQNQDAD-VSSDGKFMVMVSSNGGQ--QHIAKQDL--ATG----G-VQVLSSTFLDET 218 (269)
T ss_dssp SSCEEEEEETTSSCCEECCCSSSEEEEEE-ECTTSSEEEEEEECSSC--EEEEEEET--TTC----C-EEECCCSSSCEE
T ss_pred CCceEeeeecccccceeeecccccccccc-cccccceeEEEeecCCc--eeeeEeec--ccc----c-ceEeecCccccc
Confidence 99999999999998888888776666664 99999999999988764 88888887 332 2 3444433 3456
Q ss_pred EEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccCC
Q 008274 265 AVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYEQ 304 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~~ 304 (571)
+.|||||++|+|+... +....||++++ +++..++|+..
T Consensus 219 p~~SPDG~~i~f~s~~-~~~~~l~~~~~-dg~~~~~lt~~ 256 (269)
T d2hqsa1 219 PSLAPNGTMVIYSSSQ-GMGSVLNLVST-DGRFKARLPAT 256 (269)
T ss_dssp EEECTTSSEEEEEEEE-TTEEEEEEEET-TSCCEEECCCS
T ss_pred eEECCCCCEEEEEEcC-CCCcEEEEEEC-CCCCEEEEeCC
Confidence 7999999999998654 45668999998 45555666653
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.74 E-value=2.4e-17 Score=157.50 Aligned_cols=128 Identities=20% Similarity=0.180 Sum_probs=89.3
Q ss_pred CCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCC
Q 008274 318 PPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARR 397 (571)
Q Consensus 318 ~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 397 (571)
..+.-.+++.||.+|++..+.+++ -|.||++||++++.. .| ......| ++||.|+++|.||+|.+
T Consensus 10 p~~~~~v~~~dG~~i~y~~~G~~~-------g~pvvllHG~~~~~~---~w----~~~~~~l-~~~~~vi~~D~rG~G~S 74 (313)
T d1wm1a_ 10 AYDSGWLDTGDGHRIYWELSGNPN-------GKPAVFIHGGPGGGI---SP----HHRQLFD-PERYKVLLFDQRGCGRS 74 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTT-------SEEEEEECCTTTCCC---CG----GGGGGSC-TTTEEEEEECCTTSTTC
T ss_pred CCcCCEEEeCCCcEEEEEEecCCC-------CCeEEEECCCCCccc---ch----HHHHHHh-hcCCEEEEEeCCCcccc
Confidence 445667888899999988876543 255777899887654 33 3333333 56999999999999987
Q ss_pred hhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 398 GLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
..... .......+..+.+..+..+. +..++.++|||+||.++..++..+|++++..+..++..
T Consensus 75 ~~~~~------~~~~~~~~~~~d~~~~~~~~--~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~ 137 (313)
T d1wm1a_ 75 RPHAS------LDNNTTWHLVADIERLREMA--GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT 137 (313)
T ss_dssp BSTTC------CTTCSHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred ccccc------ccccchhhHHHHHHhhhhcc--CCCcceeEeeecCCchhhHHHHHHhhhheeeeeccccc
Confidence 53211 11122344444444444442 45789999999999999999999999999988876543
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.71 E-value=1.6e-16 Score=143.91 Aligned_cols=189 Identities=13% Similarity=0.015 Sum_probs=119.7
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhC--CcEEEEECCCCC------CCChhhhHHHHhcc-CCCCCchhHH
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNRGT------ARRGLKFEASIKHN-CGRIDAEDQL 418 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~------~~~~~~~~~~~~~~-~~~~~~~D~~ 418 (571)
+.|+||++||.+++.. . +...++.|... ++.+++++-+.. +..+..|....... ......+++.
T Consensus 13 ~~~~Vi~lHG~G~~~~---~----~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 85 (218)
T d1auoa_ 13 ADACVIWLHGLGADRY---D----FMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELE 85 (218)
T ss_dssp CSEEEEEECCTTCCTT---T----THHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHH
T ss_pred CCeEEEEEcCCCCChh---h----HHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHH
Confidence 4589999999655422 2 33345666543 567777664311 11111111100000 0011122232
Q ss_pred H---HHHHHHH---cCCCcCCcEEEEeechHHHHHHHHHh-cCCCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhh
Q 008274 419 T---GAEWLIK---QGLAKVGHIGLYGWSYGGYLSAITLA-RFPDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVG 491 (571)
Q Consensus 419 ~---~~~~l~~---~~~~d~~~i~l~G~S~GG~~a~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 491 (571)
+ .+..+++ +..+|.+|++++|+|+||.+++.++. +.+..++++++.++..... ....
T Consensus 86 ~~~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~--------------~~~~-- 149 (218)
T d1auoa_ 86 VSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF--------------GDEL-- 149 (218)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC--------------CTTC--
T ss_pred HHHHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccc--------------cccc--
Confidence 2 2332322 24579999999999999999988765 4567789988887643210 0000
Q ss_pred hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 492 YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 492 ~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.......++|+|++||++|.+||++.++++++.|++.|.+++++.|+ ++|.+. .+..+.+.+||.+.|
T Consensus 150 ------~~~~~~~~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~-----~~~~~~i~~wl~~~l 217 (218)
T d1auoa_ 150 ------ELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL-----PQEIHDIGAWLAARL 217 (218)
T ss_dssp ------CCCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCC-----HHHHHHHHHHHHHHH
T ss_pred ------ccchhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEEC-CCCccC-----HHHHHHHHHHHHHhc
Confidence 00112335799999999999999999999999999999999999997 689873 334678999998865
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.69 E-value=7.1e-17 Score=149.86 Aligned_cols=196 Identities=13% Similarity=0.022 Sum_probs=119.7
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
..|+||++||.+++.. .|...+..|++.||.|+++|+||+|.+....... ..+...+...+...
T Consensus 15 ~~P~ivllHG~~~~~~-------~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~---------~~~~~~~~~~~~~~ 78 (264)
T d1r3da_ 15 RTPLVVLVHGLLGSGA-------DWQPVLSHLARTQCAALTLDLPGHGTNPERHCDN---------FAEAVEMIEQTVQA 78 (264)
T ss_dssp TBCEEEEECCTTCCGG-------GGHHHHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHT
T ss_pred CCCeEEEeCCCCCCHH-------HHHHHHHHHHhCCCEEEEEecccccccccccccc---------cchhhhhhhhcccc
Confidence 4588999999876643 3566788999999999999999998765322111 12222223333333
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc------------cc------------hhhhh---
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY------------DT------------FYTEK--- 480 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~------------~~------------~~~~~--- 480 (571)
......++.++|||+||.+++.++.++|+.+..++...+....... .. .....
T Consensus 79 ~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
T d1r3da_ 79 HVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQ 158 (264)
T ss_dssp TCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTT
T ss_pred cccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 3335678999999999999999999999877665543322110000 00 00000
Q ss_pred --hcCCCC-------------CChh----------hhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC
Q 008274 481 --YMGLPS-------------EDPV----------GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR 535 (571)
Q Consensus 481 --~~g~~~-------------~~~~----------~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~ 535 (571)
...... .... ..........+..+++|+++++|++|..+ ..+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~-----~~~~~~----- 228 (264)
T d1r3da_ 159 QAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAES----- 228 (264)
T ss_dssp SGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HHHHHH-----
T ss_pred hhhhcccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHH-----HHHHhc-----
Confidence 000000 0000 00011223345678899999999999542 122221
Q ss_pred CCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 536 KPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 536 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.++++++++++||.+ ..++.+.+.+.|.+||+..
T Consensus 229 ~~~~~~~i~~~gH~~-~~e~P~~~~~~i~~fl~~l 262 (264)
T d1r3da_ 229 SGLSYSQVAQAGHNV-HHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp HCSEEEEETTCCSCH-HHHCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCch-HHHCHHHHHHHHHHHHHhc
Confidence 357889999999987 4467889999999999874
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.65 E-value=3.7e-15 Score=139.23 Aligned_cols=216 Identities=14% Similarity=0.068 Sum_probs=142.0
Q ss_pred CCCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCC
Q 008274 317 EPPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTA 395 (571)
Q Consensus 317 ~~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~ 395 (571)
...|.++++++ .|..++..++.|. .|+|+++||.++... ...|.... ...+.+++++++||++|.-..+
T Consensus 2 ~~~e~~~v~s~~~~r~~~~~v~~~~--------~pvlylLhG~~g~~~-~~~w~~~~-~~~~~~~~~~~iVV~p~g~~~~ 71 (267)
T d1r88a_ 2 APYENLMVPSPSMGRDIPVAFLAGG--------PHAVYLLDAFNAGPD-VSNWVTAG-NAMNTLAGKGISVVAPAGGAYS 71 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEEEECCS--------SSEEEEECCSSCCSS-SCHHHHTS-CHHHHHTTSSSEEEEECCCTTS
T ss_pred CceEEEEEecccCCceeeEEEECCC--------CCEEEEcCCCCCCCC-cchhhhcc-HHHHHHhhCCeEEEEECCCCCc
Confidence 35678888876 4677988887653 289999999544321 12453322 2467788999999999853221
Q ss_pred CChhhhHHHHhccCCCCCchhHH--HHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccc
Q 008274 396 RRGLKFEASIKHNCGRIDAEDQL--TGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGY 473 (571)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~ 473 (571)
.+ .++... +....++.+ +.+.++.++..+|++|++|.|+||||++|+.+++++|++|+++++.+|..+....
T Consensus 72 ~y-~~~~~~-----~~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~~~~ 145 (267)
T d1r88a_ 72 MY-TNWEQD-----GSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNT 145 (267)
T ss_dssp TT-SBCSSC-----TTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSH
T ss_pred CC-cccccc-----ccccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCCCCc
Confidence 11 111100 111122222 3566777776689999999999999999999999999999999999998765432
Q ss_pred cc-----hhhh--------hhcCCCCCChhhhccCCcchhhccC---CCcEEEEecCCCCCCCh-----------HHHHH
Q 008274 474 DT-----FYTE--------KYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDENVHF-----------RHTAR 526 (571)
Q Consensus 474 ~~-----~~~~--------~~~g~~~~~~~~~~~~s~~~~~~~~---~~p~lli~G~~D~~v~~-----------~~~~~ 526 (571)
.. .... ...|.+ ....+.+.+|..+++++ ..++++.+|..|..+.. ..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~~~~~~~~~~~~ 223 (267)
T d1r88a_ 146 TTNGAIAAGMQQFGGVDTNGMWGAP--QLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRM 223 (267)
T ss_dssp HHHHHHHHHHHHHHCCCTHHHHCCG--GGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHH
T ss_pred cchhhhhhHHhhhcCCcHhhccCCc--chHhHHhcCHHHHHHhccccCceEEEEecCCCcccccchhhhhHHHhhhhHHH
Confidence 11 0000 111221 22445667777766655 35789999999876653 34556
Q ss_pred HHHHHHHcC-CCeeEEEcCCCCCCC
Q 008274 527 LINALVAAR-KPYEILIFPDERHMP 550 (571)
Q Consensus 527 ~~~~l~~~~-~~~~~~~~~~~~H~~ 550 (571)
+.++|++.+ .++++...++++|.+
T Consensus 224 ~~~~l~~~~g~~~~~~~~~~G~H~W 248 (267)
T d1r88a_ 224 FYNQYRSVGGHNGHFDFPASGDNGW 248 (267)
T ss_dssp HHHHHHHTTCCSEEEECCSSCCSSH
T ss_pred HHHHHHHcCCCcEEEEEcCCCeECh
Confidence 777787765 678888888899976
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.64 E-value=9.7e-16 Score=144.14 Aligned_cols=244 Identities=15% Similarity=0.081 Sum_probs=150.4
Q ss_pred CCeEEEEEcC-CCcEEEEEEEcCCCCCC----CCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCC
Q 008274 318 PPDIVQIQAN-DGTVLYGALYKPDESRY----GPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNR 392 (571)
Q Consensus 318 ~~~~~~~~~~-dg~~l~~~~~~P~~~~~----~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r 392 (571)
+...+++.+. -|.++.+.+|.|+++.. ..+++|||+++||.+++.. .|... ....+.+.+.|++|+.++..
T Consensus 13 ~~~~~s~~S~~l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~~---~w~~~-~~~~~~~~~~~~~vv~~~~~ 88 (299)
T d1pv1a_ 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPD---NASEK-AFWQFQADKYGFAIVFPDTS 88 (299)
T ss_dssp EEEEEEEECSSSSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCHH---HHHHH-SCHHHHHHHHTCEEEECCSS
T ss_pred EEEEEEEECcccCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCCCCHH---HHHHh-hhHHHHHHHcCCceecCCCc
Confidence 4566777765 47889999999987632 2367999999999776543 44221 22346667889999998742
Q ss_pred CCC-------------CChhhhH-HHHh-ccCCCCCchhH--HHHHHHHHHcCC-------CcCCcEEEEeechHHHHHH
Q 008274 393 GTA-------------RRGLKFE-ASIK-HNCGRIDAEDQ--LTGAEWLIKQGL-------AKVGHIGLYGWSYGGYLSA 448 (571)
Q Consensus 393 G~~-------------~~~~~~~-~~~~-~~~~~~~~~D~--~~~~~~l~~~~~-------~d~~~i~l~G~S~GG~~a~ 448 (571)
... +....+. .... ...+.....|. .+.+.++.+... .+.++.+|.|+||||+.|+
T Consensus 89 p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl 168 (299)
T d1pv1a_ 89 PRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAI 168 (299)
T ss_dssp CCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHH
T ss_pred ccccccCCcccccccccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHH
Confidence 110 0000000 0000 00001112221 123344444321 2346899999999999999
Q ss_pred HHHhc--CCCeeEEEEEcCccCCcccccc--hhhhhhcCCCCCChhhhccCCcchhhccCC----CcEEEEecCCCCCCC
Q 008274 449 ITLAR--FPDVFQCAVSGAPVTSWDGYDT--FYTEKYMGLPSEDPVGYEYSSVMHHVHKMK----GKLLLVHGMIDENVH 520 (571)
Q Consensus 449 ~~~~~--~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~----~p~lli~G~~D~~v~ 520 (571)
.++++ +|++|.++++.+|+.+...... .....+++.. ...+...++...+++.+ .++++.+|++|....
T Consensus 169 ~~al~~~~p~~f~~~~s~s~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~l~~~~~~~~~~~i~~~~G~~D~~~~ 245 (299)
T d1pv1a_ 169 CGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEE---KAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLE 245 (299)
T ss_dssp HHHHHTGGGTCCSEEEEESCCCCSTTSHHHHHHHHHHSCC-------CGGGCHHHHGGGSCCCTTCCEEEECCTTCTTTT
T ss_pred HHHHHhcCCCceEEEeeccCcCCcccccchhhhhhhhcccc---hhhhhhcCHHHHHHHhhccCCcceeEecCCCCcchh
Confidence 99975 5899999999999887543221 1122333432 23345556655554432 478899999998776
Q ss_pred hH-HHHHHHHHHHHcCCC--eeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 008274 521 FR-HTARLINALVAARKP--YEILIFPDERHMPRRHRDRIYMEERIWEFIERTL 571 (571)
Q Consensus 521 ~~-~~~~~~~~l~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 571 (571)
.. ..+.+.+++++++.+ +++...|+.+|.+. -.....+..++|+.++|
T Consensus 246 ~~~~~~~f~~~~~~~g~~~~~~~~~~~G~~Hsw~---yW~~~i~~~l~f~a~~l 296 (299)
T d1pv1a_ 246 EHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYY---FVSTFVPEHAEFHARNL 296 (299)
T ss_dssp TTCCTHHHHHHHTTSTTTTSEEEECCTTCCSSHH---HHHHHHHHHHHHHHHHT
T ss_pred hhhcHHHHHHHHHhcCCCcceEEEecCCCCcCHH---HHHHHHHHHHHHHHHhc
Confidence 54 357788888888754 67777888889863 24556677888998875
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.64 E-value=2e-15 Score=145.00 Aligned_cols=217 Identities=19% Similarity=0.195 Sum_probs=128.3
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc---cchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhcc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN---TVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHN 408 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~---~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~ 408 (571)
+.+..+.|... ++.|+ |++||++.+.. .|.. .+..+++.++++||.|+++|+||+|.++..........
T Consensus 46 ~~v~~~~p~~~----~~~Pv-vllHG~~~~~~---~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~ 117 (318)
T d1qlwa_ 46 MYVRYQIPQRA----KRYPI-TLIHGCCLTGM---TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVK 117 (318)
T ss_dssp EEEEEEEETTC----CSSCE-EEECCTTCCGG---GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHH
T ss_pred EEEEEECCCCC----CCCcE-EEECCCCCCcC---ccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHH
Confidence 55666777653 56675 56899988754 4432 23446889999999999999999999976554433333
Q ss_pred CCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC--------------CC-------e----------
Q 008274 409 CGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF--------------PD-------V---------- 457 (571)
Q Consensus 409 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~--------------~~-------~---------- 457 (571)
+......+ ++.+ .....++++.|||+||.++..++... |. .
T Consensus 118 ~~~~~~~~----l~~~----~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (318)
T d1qlwa_ 118 LGKAPASS----LPDL----FAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKL 189 (318)
T ss_dssp TTSSCGGG----SCCC----BCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHH
T ss_pred HHHHHHHH----HHHH----hhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHHHHH
Confidence 32211111 1111 11223455567777765433222111 10 0
Q ss_pred ----eEEEE-EcCccCCcccccchhhhhhcCCCCC-----ChhhhccCCcchhhccCCCcEEEEecCCCCCCCh-----H
Q 008274 458 ----FQCAV-SGAPVTSWDGYDTFYTEKYMGLPSE-----DPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHF-----R 522 (571)
Q Consensus 458 ----~~~~v-~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~-----~ 522 (571)
..... ..... ......... ..+.. ..+.+....+......+++|+|+++|++|.++|. .
T Consensus 190 ~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~ 263 (318)
T d1qlwa_ 190 AIKLDGTVLLSHSQS----GIYPFQTAA--MNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLK 263 (318)
T ss_dssp HHHHTSEEEEEEGGG----TTHHHHHHH--HCCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHH
T ss_pred Hhhhccccchhhhcc----cchhhhhhh--hhhhHHHHHHhhhcccccchhhhhhhccCCEEEEecCcCcccChhhhHHH
Confidence 00000 00000 000000000 00000 0011222345566777889999999999999984 5
Q ss_pred HHHHHHHHHHHcCCCeeEEEcC-----CCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 523 HTARLINALVAARKPYEILIFP-----DERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 523 ~~~~~~~~l~~~~~~~~~~~~~-----~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.+..+++.+++++.+++++.+| ++||.+....+.+++.+.|.+||+++
T Consensus 264 ~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~ 316 (318)
T d1qlwa_ 264 ACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRN 316 (318)
T ss_dssp HHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhc
Confidence 6677889999999999999987 46698766667789999999999986
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.64 E-value=6.3e-15 Score=138.68 Aligned_cols=191 Identities=14% Similarity=0.077 Sum_probs=116.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCc--cEEEEEEECCCCceEEEEEeecCCee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQT--KLKVLKFDIKTGQRKVILVEELDSWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~--~~~i~~~d~~~g~~~~l~~~~~~~w~ 158 (571)
+||++|+++|+.++|+. .......|.|||||+.|+|+..+... ..+||++++.+|+.++|+..... ..
T Consensus 22 dl~~~d~~~g~~~~Lt~---------~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~-~~ 91 (281)
T d1k32a2 22 DLWEHDLKSGSTRKIVS---------NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGK-ST 91 (281)
T ss_dssp EEEEEETTTCCEEEEEC---------SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEE-EE
T ss_pred cEEEEECCCCCEEEEec---------CCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCC-cc
Confidence 58999999999999854 45677889999999999998876643 45899999999999998653211 00
Q ss_pred eccCCcccCCCCCccCCCe--EEEEEecCC---ccEEEEEeCCCceee--------------------------------
Q 008274 159 NLHDCFTPLDKGVTKYSGG--FIWASEKTG---FRHLYLHDINGTCLG-------------------------------- 201 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~--~~~~s~~~g---~~~l~~~~~~~~~~~-------------------------------- 201 (571)
. .........|++|+ +++.....+ ...++.++.+++..+
T Consensus 92 ~----~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (281)
T d1k32a2 92 G----RRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGY 167 (281)
T ss_dssp T----TEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTC
T ss_pred C----ccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEecCCccceeeecCCCeEEEeeccccceeeee
Confidence 0 00000001233333 333221111 122222222222211
Q ss_pred ------------------ceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceE
Q 008274 202 ------------------PITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKH 263 (571)
Q Consensus 202 ------------------~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~ 263 (571)
.++........+ ...++.+++.....+. .+||.+++ ++. ..++||...+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~l~~~d~--~g~----~~~~lt~~~~~~ 236 (281)
T d1k32a2 168 RGGTRGKIWIEVNSGAFKKIVDMSTHVSSP---VIVGHRIYFITDIDGF--GQIYSTDL--DGK----DLRKHTSFTDYY 236 (281)
T ss_dssp CSTTCCEEEEEEETTEEEEEECCSSCCEEE---EEETTEEEEEECTTSS--CEEEEEET--TSC----SCEECCCCCSSC
T ss_pred ccCCcceeeeeccccceeeccCCcccccee---eeeccccceecccccc--cceEEEeC--CCC----ceEEeecCCCcc
Confidence 111111111111 2234567777776664 88999999 665 678898766555
Q ss_pred EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 264 VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 264 ~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
...+||||+.|+|... ..||++++.+++ .+.|.
T Consensus 237 ~~~~SpDG~~I~f~~~-----~~l~~~d~~~g~-~~~i~ 269 (281)
T d1k32a2 237 PRHLNTDGRRILFSKG-----GSIYIFNPDTEK-IEKIE 269 (281)
T ss_dssp EEEEEESSSCEEEEET-----TEEEEECTTTCC-EEECC
T ss_pred cccCcCCCCEEEEEeC-----CEEEEEECCCCC-EEEec
Confidence 5689999999999653 379999986665 45553
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.63 E-value=2.2e-15 Score=141.88 Aligned_cols=238 Identities=12% Similarity=0.060 Sum_probs=147.5
Q ss_pred CCeEEEEEcC-CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCC
Q 008274 318 PPDIVQIQAN-DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTAR 396 (571)
Q Consensus 318 ~~~~~~~~~~-dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~ 396 (571)
.++.++++++ -|..++..+. . +++|+|+++||.++... ...|... ....+.+.+.|++||+||....+.
T Consensus 5 ~v~~~~~~s~~~~r~i~~~~~--~------~~~p~lyllhG~~g~~d-~~~W~~~-~~~~~~~~~~~~ivV~P~~~~~~~ 74 (280)
T d1dqza_ 5 PVEYLQVPSASMGRDIKVQFQ--G------GGPHAVYLLDGLRAQDD-YNGWDIN-TPAFEEYYQSGLSVIMPVGGQSSF 74 (280)
T ss_dssp CEEEEEEEETTTTEEEEEEEE--C------CSSSEEEECCCTTCCSS-SCHHHHH-SCHHHHHTTSSSEEEEECCCTTCT
T ss_pred EEEEEEEecccCCCcceEEee--C------CCCCEEEECCCCCCCCc-cchhhhc-chHHHHHHhCCcEEEEECCCCCCc
Confidence 4566777664 4566777652 1 35699999999654322 1234321 224577889999999999543222
Q ss_pred ChhhhHHHHh--ccCCCCCchh--HHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCccc
Q 008274 397 RGLKFEASIK--HNCGRIDAED--QLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDG 472 (571)
Q Consensus 397 ~~~~~~~~~~--~~~~~~~~~D--~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~ 472 (571)
+. .+..... ...+.....+ +.+.+.++.++..+|++|++|.|+||||++|+.+++++|++|+++++++|..+...
T Consensus 75 ~~-~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~~~ 153 (280)
T d1dqza_ 75 YT-DWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSE 153 (280)
T ss_dssp TS-BCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTS
T ss_pred Cc-cccCCcccccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCccc
Confidence 21 1111100 0011111222 34566677677668999999999999999999999999999999999999876532
Q ss_pred ccch-------------hhhhhcCCCCCChhhhccCCcchhhccC---CCcEEEEecCCCCCCC--------------hH
Q 008274 473 YDTF-------------YTEKYMGLPSEDPVGYEYSSVMHHVHKM---KGKLLLVHGMIDENVH--------------FR 522 (571)
Q Consensus 473 ~~~~-------------~~~~~~g~~~~~~~~~~~~s~~~~~~~~---~~p~lli~G~~D~~v~--------------~~ 522 (571)
.... .....++.+. ...+...+|...++++ ..++++.+|..|.... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~e~~~~~ 231 (280)
T d1dqza_ 154 SWWPTLIGLAMNDSGGYNANSMWGPSS--DPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLR 231 (280)
T ss_dssp TTHHHHHHHHHHHTTSCCHHHHHCSTT--SHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHH
T ss_pred CcchhhhhhhHhhccCCCHhhccCCcc--hhhhhhcCHHHHHHHhhhcCCeEEEEeCCCCCccccccccccchhhHHHHH
Confidence 1100 0011122221 1345566777766665 3578999998876543 24
Q ss_pred HHHHHHHHHHHcCCCeeEEE-cCCCCCCCCCC-CcHHHHHHHHHHHHH
Q 008274 523 HTARLINALVAARKPYEILI-FPDERHMPRRH-RDRIYMEERIWEFIE 568 (571)
Q Consensus 523 ~~~~~~~~l~~~~~~~~~~~-~~~~~H~~~~~-~~~~~~~~~i~~fl~ 568 (571)
.+..+.++|.+++....... .++++|.+..+ +.......++++||+
T Consensus 232 ~~~~~~~~l~~~g~~~~~~~~~~~GgH~W~~W~~~L~~~~p~~~~~l~ 279 (280)
T d1dqza_ 232 TNQTFRDTYAADGGRNGVFNFPPNGTHSWPYWNEQLVAMKADIQHVLN 279 (280)
T ss_dssp HHHHHHHHHHHTTCCSEEEECCSCCCSSHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEEEEcCCCccCchHHHHHHHHHhHHHHHHhc
Confidence 56778888988886554444 45678986322 233455677777775
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.63 E-value=3.3e-16 Score=147.36 Aligned_cols=219 Identities=12% Similarity=0.029 Sum_probs=129.3
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHH----hCCcEEEEECCC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR----SKGILVWKLDNR 392 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~----~~G~~v~~~d~r 392 (571)
.+.+.++++..+| +..+.+|.|++++ +.+++|+|+++||+++.......+..........+. ...+.|+.++.+
T Consensus 25 g~v~~~~~~~~~~-~r~~~vylP~~y~-~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 102 (273)
T d1wb4a1 25 GRIVKETYTGING-TKSLNVYLPYGYD-PNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFN 102 (273)
T ss_dssp CEEEEEEEEETTE-EEEEEEEECTTCC-TTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSC
T ss_pred CeEEEEEEecCCC-eEEEEEEeCCCCC-CCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccC
Confidence 4678889998787 4689999999874 457899999999987764311111111212222222 347899999998
Q ss_pred CCCCChhhhHHHHhccCCC-CCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcc
Q 008274 393 GTARRGLKFEASIKHNCGR-IDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWD 471 (571)
Q Consensus 393 G~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~ 471 (571)
+....+..+.......... .+..++...++.+.....+|+++++|.|+|+||++|+.+++++|++|+++++.+|...+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~~~ 182 (273)
T d1wb4a1 103 GGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYG 182 (273)
T ss_dssp STTCCTTTHHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCBS
T ss_pred CCCCccccchhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcccccC
Confidence 7766555443332211100 000000111111222223689999999999999999999999999999999999987554
Q ss_pred cccchhhhhhcCCCCCChhhhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHH----------HcCCCeeEE
Q 008274 472 GYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALV----------AARKPYEIL 541 (571)
Q Consensus 472 ~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~----------~~~~~~~~~ 541 (571)
........... .... .........++++..|+.|.. ......+.+.+. ..+.++.+.
T Consensus 183 ~~~~~~~~~~~-------~~~~----~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (273)
T d1wb4a1 183 NSPQDKANSIA-------EAIN----RSGLSKREYFVFAATGSEDIA--YANMNPQIEAMKALPHFDYTSDFSKGNFYFL 249 (273)
T ss_dssp SSHHHHHHHHH-------HHHH----HHTCCTTSCEEEEEEETTCTT--HHHHHHHHHHHHTSTTCCBBSCTTTCCEEEE
T ss_pred CCcccccccch-------hhhh----hhhhcccceEEEEecCCCCcc--cccchhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 32211111000 0000 001112223566666766643 344444444443 334688999
Q ss_pred EcCCCCCCC
Q 008274 542 IFPDERHMP 550 (571)
Q Consensus 542 ~~~~~~H~~ 550 (571)
++++++|.+
T Consensus 250 ~~~~ggH~w 258 (273)
T d1wb4a1 250 VAPGATHWW 258 (273)
T ss_dssp EETTCCSSH
T ss_pred EECCCccCH
Confidence 999999964
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.61 E-value=3.3e-15 Score=141.30 Aligned_cols=213 Identities=9% Similarity=-0.028 Sum_probs=126.5
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|.++++.... +.|.||++||.+++.. .| ...+..|+ .+|.|+++|+||+|.+.......
T Consensus 16 ~g~~i~y~~~G---------~g~~vvllHG~~~~~~---~~----~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~--- 75 (298)
T d1mj5a_ 16 KGRRMAYIDEG---------TGDPILFQHGNPTSSY---LW----RNIMPHCA-GLGRLIACDLIGMGDSDKLDPSG--- 75 (298)
T ss_dssp TTEEEEEEEES---------CSSEEEEECCTTCCGG---GG----TTTGGGGT-TSSEEEEECCTTSTTSCCCSSCS---
T ss_pred CCEEEEEEEEc---------CCCcEEEECCCCCCHH---HH----HHHHHHHh-cCCEEEEEeCCCCCCCCCCcccc---
Confidence 78888876542 1256788999877643 33 44456665 47999999999998775321110
Q ss_pred cCCCCCchhHHHHHHHH-HHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCcccccc-----------
Q 008274 408 NCGRIDAEDQLTGAEWL-IKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSWDGYDT----------- 475 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l-~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~----------- 475 (571)
.......+..+.+..+ .... ..+++.++|||+||.+++.++.++|+++++++..++.........
T Consensus 76 -~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (298)
T d1mj5a_ 76 -PERYAYAEHRDYLDALWEALD--LGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQA 152 (298)
T ss_dssp -TTSSCHHHHHHHHHHHHHHTT--CTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHH
T ss_pred -ccccccchhhhhhcccccccc--ccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhh
Confidence 0111233333333333 3332 456899999999999999999999999999887665432110000
Q ss_pred --------------hhhh----hhcCCCCC----------------Chhh---h-c--------------cCCcchhhcc
Q 008274 476 --------------FYTE----KYMGLPSE----------------DPVG---Y-E--------------YSSVMHHVHK 503 (571)
Q Consensus 476 --------------~~~~----~~~g~~~~----------------~~~~---~-~--------------~~s~~~~~~~ 503 (571)
.... ........ .... . . .......+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
T d1mj5a_ 153 FRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSE 232 (298)
T ss_dssp HHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTT
T ss_pred hhhhhhhhhhhhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhhhhhhhhhh
Confidence 0000 00000000 0000 0 0 0001122456
Q ss_pred CCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 008274 504 MKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 504 ~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
+.+|+|+++|++|...+ .....+.+ .-.+.++++. ++||.+ ..++.+.+.+.|.+||++.
T Consensus 233 ~~~P~l~i~g~~d~~~~-~~~~~~~~----~~p~~~~~~~-~~GH~~-~~e~P~~v~~~i~~fl~~~ 292 (298)
T d1mj5a_ 233 SPIPKLFINAEPGALTT-GRMRDFCR----TWPNQTEITV-AGAHFI-QEDSPDEIGAAIAAFVRRL 292 (298)
T ss_dssp CCSCEEEEEEEECSSSS-HHHHHHHT----TCSSEEEEEE-EESSCG-GGTCHHHHHHHHHHHHHHH
T ss_pred cceeEEEEecCCCCcCh-HHHHHHHH----HCCCCEEEEe-CCCCch-HHhCHHHHHHHHHHHHhhh
Confidence 78899999999998765 33444333 3345665554 669987 5577899999999999874
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=1.1e-14 Score=135.36 Aligned_cols=99 Identities=15% Similarity=0.084 Sum_probs=71.4
Q ss_pred ceEEEEEcCCCCceeecccccccchhhhHHHHhC--CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 349 YKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 349 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
.|+ |++||.+++.. .|...+..|.+. ||.|+++|+||+|.+...... .++++.+.+..+.+
T Consensus 3 ~Pv-vllHG~~~~~~-------~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~~---------~~~~~~~~l~~~l~ 65 (268)
T d1pjaa_ 3 KPV-IVVHGLFDSSY-------SFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWE---------QVQGFREAVVPIMA 65 (268)
T ss_dssp CCE-EEECCTTCCGG-------GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHH---------HHHHHHHHHHHHHH
T ss_pred CCE-EEECCCCCCHH-------HHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCcccc---------CHHHHHHHHHHHHh
Confidence 465 46899876643 455567788764 899999999999877543221 13444444444444
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCC-eeEEEEEcCcc
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGAPV 467 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-~~~~~v~~~~~ 467 (571)
+. + +++.++||||||.+++.+|.++|+ +++.+++.++.
T Consensus 66 ~l--~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~ 104 (268)
T d1pjaa_ 66 KA--P-QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSP 104 (268)
T ss_dssp HC--T-TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCC
T ss_pred cc--C-CeEEEEccccHHHHHHHHHHHCCccccceEEEECCC
Confidence 32 3 789999999999999999999998 58888877653
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.54 E-value=4e-12 Score=118.33 Aligned_cols=185 Identities=17% Similarity=0.143 Sum_probs=132.6
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.+||++|.+++..++++. ....+..|+|||||+.|||++.+.. ...++.++.+++..++++.........
T Consensus 19 ~~l~i~d~dG~~~~~l~~---------~~~~~~sP~wSPDGk~IAf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (269)
T d2hqsa1 19 YELRVSDYDGYNQFVVHR---------SPQPLMSPAWSPDGSKLAYVTFESG-RSALVIQTLANGAVRQVASFPRHNGAP 88 (269)
T ss_dssp EEEEEEETTSCSCEEEEE---------ESSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTTCCEEEEECCSSCEEEE
T ss_pred EEEEEEcCCCCCcEEEec---------CCCceeeeEECCCCCEEEEEEeecc-CcceeeeecccCceeEEeeeecccccc
Confidence 368999999999988854 3455678999999999999987764 457999999999988887644332211
Q ss_pred ccCCcccCCCCCccCCC--eEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 160 LHDCFTPLDKGVTKYSG--GFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d--~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
.|++| .+++.+...|...+.............+........+ .++.+++.+++.+.+.+. .++
T Consensus 89 ------------~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~--~~i 153 (269)
T d2hqsa1 89 ------------AFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEP-TWFPDSQNLAFTSDQAGR--PQV 153 (269)
T ss_dssp ------------EECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEE-EECTTSSEEEEEECTTSS--CEE
T ss_pred ------------eecCCCCeeeEeeecCCccceeecccccccceeeeecccccccc-ccccccccceecccccCC--ceE
Confidence 23444 4777777778777877776665555555544333333 488899999999988764 789
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
+..++ ++. ...+++...+ .....+||+++++++.... .....+++.+...+.
T Consensus 154 ~~~~~--~~~----~~~~~~~~~~~~~~~~~spdg~~~~~~~~~-~~~~~i~~~~~~~~~ 206 (269)
T d2hqsa1 154 YKVNI--NGG----APQRITWEGSQNQDADVSSDGKFMVMVSSN-GGQQHIAKQDLATGG 206 (269)
T ss_dssp EEEET--TSS----CCEECCCSSSEEEEEEECTTSSEEEEEEEC-SSCEEEEEEETTTCC
T ss_pred eeeec--ccc----cceeeecccccccccccccccceeEEEeec-CCceeeeEeeccccc
Confidence 99888 443 4556665544 3456999999999987655 455688888875554
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.50 E-value=1.8e-13 Score=128.52 Aligned_cols=206 Identities=11% Similarity=0.087 Sum_probs=129.9
Q ss_pred eeeeeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEE
Q 008274 5 FHVLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGV 84 (571)
Q Consensus 5 ~~~~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~ 84 (571)
|.+++-+|.+.-|+.. -.....++|||||++|||++....... ..+||+
T Consensus 24 ~~~d~~~g~~~~Lt~~-~~~~~~p~~SPDG~~iaf~~~~~~~~~------------------------------~~~i~~ 72 (281)
T d1k32a2 24 WEHDLKSGSTRKIVSN-LGVINNARFFPDGRKIAIRVMRGSSLN------------------------------TADLYF 72 (281)
T ss_dssp EEEETTTCCEEEEECS-SSEEEEEEECTTSSEEEEEEEESTTCC------------------------------EEEEEE
T ss_pred EEEECCCCCEEEEecC-CCcccCEEECCCCCEEEEEEeeCCCCC------------------------------ceEEEE
Confidence 4456777777666443 233567999999999999876543321 246899
Q ss_pred EECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC--ccEEEEEEECCCCceEEEEEeec-CCeeecc
Q 008274 85 VSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ--TKLKVLKFDIKTGQRKVILVEEL-DSWVNLH 161 (571)
Q Consensus 85 ~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~--~~~~i~~~d~~~g~~~~l~~~~~-~~w~~~~ 161 (571)
+++.+++.++++...+. ..........+.|+|||+.+++...... ....++.++.++++.+.+..... ..|...+
T Consensus 73 ~~~~~g~~~~lt~~~~~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (281)
T d1k32a2 73 YNGENGEIKRITYFSGK--STGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADG 150 (281)
T ss_dssp EETTTTEEEECCCCCEE--EETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETT
T ss_pred EEecCCceEEeeecCCC--ccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEecCCccceeeecCC
Confidence 99999999988653110 0011234456899999999888765542 34467788887776543221110 0111110
Q ss_pred CCc-------------------------------------ccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeecee
Q 008274 162 DCF-------------------------------------TPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPIT 204 (571)
Q Consensus 162 ~~~-------------------------------------~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT 204 (571)
..+ ......+.+.++.+++.+++.|..+||++++++++.++||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~lt 230 (281)
T d1k32a2 151 RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHT 230 (281)
T ss_dssp EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECC
T ss_pred CeEEEeeccccceeeeeccCCcceeeeeccccceeeccCCccccceeeeeccccceecccccccceEEEeCCCCceEEee
Confidence 000 0000001223445666677788999999999999999999
Q ss_pred ec-CeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC
Q 008274 205 EG-DWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN 258 (571)
Q Consensus 205 ~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~ 258 (571)
.. .+.+ ..|||||+.|+|.+. .+||.+++ +++ +.++|+.
T Consensus 231 ~~~~~~~---~~~SpDG~~I~f~~~------~~l~~~d~--~~g----~~~~i~~ 270 (281)
T d1k32a2 231 SFTDYYP---RHLNTDGRRILFSKG------GSIYIFNP--DTE----KIEKIEI 270 (281)
T ss_dssp CCCSSCE---EEEEESSSCEEEEET------TEEEEECT--TTC----CEEECCC
T ss_pred cCCCccc---ccCcCCCCEEEEEeC------CEEEEEEC--CCC----CEEEecc
Confidence 75 3332 248999999999764 35999998 554 6677764
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.50 E-value=5.4e-14 Score=139.28 Aligned_cols=226 Identities=11% Similarity=-0.049 Sum_probs=142.8
Q ss_pred CCCeEEEEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCC------cEEEEEC
Q 008274 317 EPPDIVQIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKG------ILVWKLD 390 (571)
Q Consensus 317 ~~~~~~~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G------~~v~~~d 390 (571)
.....+.... +|..|+........ +..|.||++||.|++.. .|...+..|++.| |.||+||
T Consensus 80 n~~~~f~~~i-~G~~iHf~h~~~~~-----~~~~pLlLlHG~P~s~~-------~w~~vi~~La~~g~~~~~~f~VIaPD 146 (394)
T d1qo7a_ 80 NSFPQFTTEI-EGLTIHFAALFSER-----EDAVPIALLHGWPGSFV-------EFYPILQLFREEYTPETLPFHLVVPS 146 (394)
T ss_dssp TTSCEEEEEE-TTEEEEEEEECCSC-----TTCEEEEEECCSSCCGG-------GGHHHHHHHHHHCCTTTCCEEEEEEC
T ss_pred HcCCCeEEEE-CCEEEEEEEEeccC-----CCCCEEEEeccccccHH-------HHHHHHHhhccccCCcccceeeeccc
Confidence 3344455444 79999988776544 34467788999988754 4666788999888 9999999
Q ss_pred CCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCCc
Q 008274 391 NRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTSW 470 (571)
Q Consensus 391 ~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~~ 470 (571)
+||+|.|.... ........++...+..+...- ...+..++|||+||.++..+++.+|+.+.+++........
T Consensus 147 LpG~G~S~~P~------~~~~y~~~~~a~~~~~l~~~l--g~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~ 218 (394)
T d1qo7a_ 147 LPGYTFSSGPP------LDKDFGLMDNARVVDQLMKDL--GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRA 218 (394)
T ss_dssp CTTSTTSCCCC------SSSCCCHHHHHHHHHHHHHHT--TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCS
T ss_pred ccccCCCCCCC------CCCccCHHHHHHHHHHHHhhc--cCcceEEEEecCchhHHHHHHHHhhccccceeEeeecccc
Confidence 99999876311 111233555666666665543 3467889999999999999999999988887775433210
Q ss_pred cc-------c---c----------------------------------------chhhhhhc--CCCCCChh-------h
Q 008274 471 DG-------Y---D----------------------------------------TFYTEKYM--GLPSEDPV-------G 491 (571)
Q Consensus 471 ~~-------~---~----------------------------------------~~~~~~~~--g~~~~~~~-------~ 491 (571)
.. . . ....+.+. ........ .
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~ 298 (394)
T d1qo7a_ 219 PPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSL 298 (394)
T ss_dssp CSSSCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHH
T ss_pred cccccccccchhhhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHHHHHHH
Confidence 00 0 0 00000000 00000000 0
Q ss_pred -------------hcc----------CCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCC
Q 008274 492 -------------YEY----------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERH 548 (571)
Q Consensus 492 -------------~~~----------~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 548 (571)
|.. ........+|++|+++++|.+|...++.. +.+.+ ...+.+.+++++||
T Consensus 299 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~~---~~~~~---~~~~~~~~~~~~GH 372 (394)
T d1qo7a_ 299 YWLTESFPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPRS---WIATT---GNLVFFRDHAEGGH 372 (394)
T ss_dssp HHHTTCHHHHGGGHHHHCC---------CTTTTTCEEEEEEEEECTBSSSCCCHH---HHGGG---EEEEEEEECSSCBS
T ss_pred HhhccccchhHHHHHHHhhcccccchhhhhccCCcccCCeEEEEeCCCccccHHH---HHHhc---cCceEEEEcCCcCC
Confidence 000 00011223466899999999998766542 33332 22356778999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHh
Q 008274 549 MPRRHRDRIYMEERIWEFIERT 570 (571)
Q Consensus 549 ~~~~~~~~~~~~~~i~~fl~~~ 570 (571)
.. ..+..+.+.+.|.+||++.
T Consensus 373 f~-~~E~Pe~~a~~I~~Fl~~v 393 (394)
T d1qo7a_ 373 FA-ALERPRELKTDLTAFVEQV 393 (394)
T ss_dssp CH-HHHCHHHHHHHHHHHHHHH
T ss_pred ch-HHhCHHHHHHHHHHHHHHh
Confidence 76 6688999999999999874
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.39 E-value=8e-12 Score=121.08 Aligned_cols=183 Identities=13% Similarity=0.084 Sum_probs=123.2
Q ss_pred eEEECC-CCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 27 GYWWSL-DSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 27 ~~~wSP-Dg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
...||| ||++|||.... +|+++|+++++.+++.
T Consensus 7 ~~~fSP~dG~~~a~~~~g-------------------------------------~v~v~d~~~~~~~~~~--------- 40 (360)
T d1k32a3 7 AEDFSPLDGDLIAFVSRG-------------------------------------QAFIQDVSGTYVLKVP--------- 40 (360)
T ss_dssp EEEEEECGGGCEEEEETT-------------------------------------EEEEECTTSSBEEECS---------
T ss_pred cccccCCCCCEEEEEECC-------------------------------------eEEEEECCCCcEEEcc---------
Confidence 466999 99999996421 5799999999887652
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
....+..++|||||+.|++...+.. ..|++.|.++|+.+++......-+. ..+++|+ .++....
T Consensus 41 -~~~~v~~~~~spDg~~l~~~~~~~g--~~v~v~d~~~~~~~~~~~~~~~v~~------------~~~spdg~~l~~~~~ 105 (360)
T d1k32a3 41 -EPLRIRYVRRGGDTKVAFIHGTREG--DFLGIYDYRTGKAEKFEENLGNVFA------------MGVDRNGKFAVVAND 105 (360)
T ss_dssp -CCSCEEEEEECSSSEEEEEEEETTE--EEEEEEETTTCCEEECCCCCCSEEE------------EEECTTSSEEEEEET
T ss_pred -CCCCEEEEEECCCCCEEEEEEcCCC--CEEEEEECCCCcEEEeeCCCceEEe------------eeecccccccceecc
Confidence 3445778999999999998877653 2488999999998877543322110 0245555 4433333
Q ss_pred CCccEEEEEeCCCceeeceeec-CeEEEEEEEEeecCcEEEEEEcCC-----CCceeEEEEEEeCCCCCCCCCCCeEecC
Q 008274 185 TGFRHLYLHDINGTCLGPITEG-DWMVEQIVGVNEASGQVYFTGTLD-----GPLESHLYCAKLYPDWNHTLEAPVKLTN 258 (571)
Q Consensus 185 ~g~~~l~~~~~~~~~~~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~-----~~~~~~l~~~~l~~~g~~~~~~~~~lt~ 258 (571)
+ .+++.++.++++...+... ......+ .|+|||++|++..... +.....++.+++ .+. ....++.
T Consensus 106 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~--~~~----~~~~~~~ 176 (360)
T d1k32a3 106 R--FEIMTVDLETGKPTVIERSREAMITDF-TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM--EGR----KIFAATT 176 (360)
T ss_dssp T--SEEEEEETTTCCEEEEEECSSSCCCCE-EECTTSCEEEEEEEECSSTTCSCCEEEEEEEET--TTT----EEEECSC
T ss_pred c--cccccccccccceeeeeecccccccch-hhccceeeeeeeccccccceeeccccceeeecc--ccC----ceeeecc
Confidence 2 3678888888776666553 3333444 4999999999987632 223466777777 333 4556665
Q ss_pred CCc-eEEEEECCCCCEEEEEee
Q 008274 259 GKG-KHVAVLDHNMRNFVDFHD 279 (571)
Q Consensus 259 ~~g-~~~~~~s~~g~~~v~~~s 279 (571)
... ...+.+||||+++++...
T Consensus 177 ~~~~~~~~~~spdg~~l~~~s~ 198 (360)
T d1k32a3 177 ENSHDYAPAFDADSKNLYYLSY 198 (360)
T ss_dssp SSSBEEEEEECTTSCEEEEEES
T ss_pred cccccccccccCCCCEEEEEeC
Confidence 443 345689999999987643
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.36 E-value=2.3e-12 Score=111.98 Aligned_cols=169 Identities=11% Similarity=-0.059 Sum_probs=112.6
Q ss_pred eEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHcCC
Q 008274 350 KTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQGL 429 (571)
Q Consensus 350 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 429 (571)
|+ |++||..++.. .|..+++.|.++||.|+.++.+|.+.+....... .+++.+.++.+.++.
T Consensus 4 PV-v~vHG~~~~~~-------~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~i~~~~~~~- 65 (179)
T d1ispa_ 4 PV-VMVHGIGGASF-------NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNN---------GPVLSRFVQKVLDET- 65 (179)
T ss_dssp CE-EEECCTTCCGG-------GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHH---------HHHHHHHHHHHHHHH-
T ss_pred CE-EEECCCCCCHH-------HHHHHHHHHHHcCCeEEEEecCCccccccccchh---------hhhHHHHHHHHHHhc-
Confidence 66 55899766532 3566789999999999999999876554322111 344555566555542
Q ss_pred CcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCcchhhccCCCc
Q 008274 430 AKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSVMHHVHKMKGK 507 (571)
Q Consensus 430 ~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~p 507 (571)
..+++.|+||||||.++..++.++ +++++.+|+.++.... .+... +. ........|
T Consensus 66 -~~~~v~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g-------------~~~~~---l~-----~~~~~~~~~ 123 (179)
T d1ispa_ 66 -GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRL-------------TTGKA---LP-----GTDPNQKIL 123 (179)
T ss_dssp -CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGG-------------TCSBC---CC-----CSCTTCCCE
T ss_pred -CCceEEEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCC-------------chhhh---cC-----CcccccCce
Confidence 346899999999999999998765 6789999988764321 10000 00 001123468
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008274 508 LLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 508 ~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
++.++|..|.+|++..+. -...+.+.+++.+|.... . ...+.+.+.+||+.
T Consensus 124 ~~~i~~~~D~~v~~~~~~---------l~~~~~~~~~~~~H~~l~-~-~~~v~~~i~~~L~~ 174 (179)
T d1ispa_ 124 YTSIYSSADMIVMNYLSR---------LDGARNVQIHGVGHIGLL-Y-SSQVNSLIKEGLNG 174 (179)
T ss_dssp EEEEEETTCSSSCHHHHC---------CBTSEEEEESSCCTGGGG-G-CHHHHHHHHHHHTT
T ss_pred EEEEEecCCcccCchhhc---------CCCceEEEECCCCchhhc-c-CHHHHHHHHHHHhc
Confidence 999999999999986431 134466788999996422 2 24678888888864
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=1.1e-11 Score=124.75 Aligned_cols=252 Identities=10% Similarity=0.050 Sum_probs=136.8
Q ss_pred eeeeeecccceeeeecc--CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEE
Q 008274 6 HVLQTHGLAEYIAQEEM--DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLG 83 (571)
Q Consensus 6 ~~~~~~g~~~~~~~~~~--~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 83 (571)
..+|-+|...-+...+. .....+.|||||++|||++.+ .||
T Consensus 95 i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~~-------------------------------------nl~ 137 (465)
T d1xfda1 95 LSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFEN-------------------------------------NIY 137 (465)
T ss_dssp EEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETT-------------------------------------EEE
T ss_pred EEEccCCceeeccCccCCccccceeeeccCCceEEEEecc-------------------------------------eEE
Confidence 34555565544433222 123458899999999997632 467
Q ss_pred EEECCCCceEEEeccCCCCCCC----------CCCceeEEEEEccCCeEEEEEEeccCc---------------------
Q 008274 84 VVSAAGGPVSWMDLQCGGTDQN----------YDEEYLARVNWMHGNILTAQVLNRSQT--------------------- 132 (571)
Q Consensus 84 ~~dl~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~wspDg~~i~~~~~r~~~--------------------- 132 (571)
+.+..+++..+++......... +.......+-|||||+.|+|++-....
T Consensus 138 ~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~ 217 (465)
T d1xfda1 138 YCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYH 217 (465)
T ss_dssp EESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEE
T ss_pred EEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeee
Confidence 7888777777776531110000 001122456799999999987532211
Q ss_pred ---------cEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-E-EEEEecCC-ccEEEEEeCCCcee
Q 008274 133 ---------KLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-F-IWASEKTG-FRHLYLHDINGTCL 200 (571)
Q Consensus 133 ---------~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~-~~~s~~~g-~~~l~~~~~~~~~~ 200 (571)
...|+++|++++..+.+.......- .....+.. ..|.+|+ + +...+|.. ...|+++++.+++.
T Consensus 218 Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~-~~~~y~~~----~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~ 292 (465)
T d1xfda1 218 YPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR-MREYYITM----VKWATSTKVAVTWLNRAQNVSILTLCDATTGVC 292 (465)
T ss_dssp CCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG-GSSEEEEE----EEESSSSEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred ccccCCCCCceeEEEEecCCCcEEEEEeccCcCc-cccceeee----eEEcCCCeEEEEEEccccccceEEEEcCCCCcE
Confidence 2246666666655433221111000 00000001 1355555 3 33456643 56789999988887
Q ss_pred eceeec---CeEE--EEEEEEeecCcEEEEEEc--CCCCceeEEEEEEeCCC-CCCCCCCCeEecCCCce--EEEEECCC
Q 008274 201 GPITEG---DWMV--EQIVGVNEASGQVYFTGT--LDGPLESHLYCAKLYPD-WNHTLEAPVKLTNGKGK--HVAVLDHN 270 (571)
Q Consensus 201 ~~lT~~---~~~~--~~~~~~s~dg~~l~~~~~--~~~~~~~~l~~~~l~~~-g~~~~~~~~~lt~~~g~--~~~~~s~~ 270 (571)
+.+..+ .|.. ...+.|++||+.++|... +.+ ..++|.+.+... ........++||.++-. ....++.+
T Consensus 293 ~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g--~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~ 370 (465)
T d1xfda1 293 TKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG--RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEK 370 (465)
T ss_dssp EEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS--SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETT
T ss_pred EEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecc--cCceEEEEeccccccCCCceeEEeccCCceEEEEEEEcCC
Confidence 766432 2211 123359999998887643 333 366776654210 00001156788986532 23378899
Q ss_pred CCEEEEEeeCCCCCC--EEEEEEcCCCceeEecc
Q 008274 271 MRNFVDFHDSLDSPP--RILLCSLQDGSLVLPLY 302 (571)
Q Consensus 271 g~~~v~~~s~~~~p~--~l~~~~~~~~~~~~~l~ 302 (571)
++.+.|.... ..|. .||.+++..+...+.|+
T Consensus 371 ~~~vyF~a~~-~~p~~~hly~v~l~g~~~~~~lt 403 (465)
T d1xfda1 371 GNKIYFLSTE-DLPRRRQLYSANTVGNFNRQCLS 403 (465)
T ss_dssp TTEEEEEESS-SCTTCCEEEEECSSTTCCCBCSS
T ss_pred CCEEEEEEeC-CCCCceEEEEEECCCCCcceeec
Confidence 9998887643 3443 58888875544434444
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.34 E-value=1.9e-11 Score=116.42 Aligned_cols=233 Identities=13% Similarity=0.068 Sum_probs=146.3
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccc--cccchhh---hHHHHhCCcEEEEECCCCCCCChhhhHHH
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSW--INTVDMR---AQYLRSKGILVWKLDNRGTARRGLKFEAS 404 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~--~~~~~~~---~~~l~~~G~~v~~~d~rG~~~~~~~~~~~ 404 (571)
.+|.+..|--.+. .+-++||++|+-.++....... ...|..+ ...+-...|-||++|..|++.......+.
T Consensus 24 ~~laY~t~G~ln~----~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~ 99 (357)
T d2b61a1 24 INVAYQTYGTLND----EKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSI 99 (357)
T ss_dssp EEEEEEEESCCCT----TCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSB
T ss_pred ceEEEEeecccCC----CCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCC
Confidence 4566666654332 3458999999966654322110 0111111 22344567999999999865421111110
Q ss_pred -------HhccCCCCCchhHHHHHHHHHHcCCCcCCcE-EEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC-------
Q 008274 405 -------IKHNCGRIDAEDQLTGAEWLIKQGLAKVGHI-GLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS------- 469 (571)
Q Consensus 405 -------~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i-~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~------- 469 (571)
...+.....+.|+.++-..|+++- .-+|+ +|+|.||||+.|+..++++|+++..+|++++..-
T Consensus 100 ~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~L--GI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~ 177 (357)
T d2b61a1 100 NPQTGKPYGSQFPNIVVQDIVKVQKALLEHL--GISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIG 177 (357)
T ss_dssp CTTTSSBCGGGCCCCCHHHHHHHHHHHHHHT--TCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHH
T ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHHh--CcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHH
Confidence 012344567889999988888764 34566 7889999999999999999999999888766421
Q ss_pred --------------ccc--c-c----------------------chhhhhhcCCCC---------CChhhhc--------
Q 008274 470 --------------WDG--Y-D----------------------TFYTEKYMGLPS---------EDPVGYE-------- 493 (571)
Q Consensus 470 --------------~~~--~-~----------------------~~~~~~~~g~~~---------~~~~~~~-------- 493 (571)
|.. | . ..+..++..... ...+.|.
T Consensus 178 ~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~ 257 (357)
T d2b61a1 178 FNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFL 257 (357)
T ss_dssp HHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHH
Confidence 100 0 0 000111110000 0001110
Q ss_pred -cC----------------------CcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCC-CCC
Q 008274 494 -YS----------------------SVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDE-RHM 549 (571)
Q Consensus 494 -~~----------------------s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~-~H~ 549 (571)
.. +....+++|++|+|++..+.|...|+++.+.+++.|...++++++++++.. ||.
T Consensus 258 ~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHd 337 (357)
T d2b61a1 258 ERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHD 337 (357)
T ss_dssp TTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGG
T ss_pred hhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCcc
Confidence 01 112236789999999999999999999999999999999999999999875 785
Q ss_pred CCCCCcHHHHHHHHHHHHHH
Q 008274 550 PRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 550 ~~~~~~~~~~~~~i~~fl~~ 569 (571)
-. ..+...+.+.|.+||..
T Consensus 338 af-L~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 338 AF-LVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp HH-HHCHHHHHHHHHHHHHT
T ss_pred cc-CcCHHHHHHHHHHHHcc
Confidence 21 22456778888888864
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.32 E-value=6.2e-11 Score=113.05 Aligned_cols=233 Identities=14% Similarity=0.097 Sum_probs=144.2
Q ss_pred cEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecc---------cccccchhhhHHHHhCCcEEEEECCCCCCCChhh
Q 008274 330 TVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCD---------SWINTVDMRAQYLRSKGILVWKLDNRGTARRGLK 400 (571)
Q Consensus 330 ~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~---------~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~ 400 (571)
.+|.+..|--.+. .+-++||++|+-.++..+.. .|-..+--....+...-|-||++|..|++.+...
T Consensus 27 ~~l~Y~t~G~ln~----~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~ 102 (362)
T d2pl5a1 27 VVIAYETYGTLSS----SKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSG 102 (362)
T ss_dssp EEEEEEEEECCCT----TSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSS
T ss_pred ceEEEEeeeccCC----CCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccC
Confidence 4555666654332 34589999999666543211 1210011112334456699999999987543211
Q ss_pred hHHHH-------hccCCCCCchhHHHHHHHHHHcCCCcCCcE-EEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC---
Q 008274 401 FEASI-------KHNCGRIDAEDQLTGAEWLIKQGLAKVGHI-GLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS--- 469 (571)
Q Consensus 401 ~~~~~-------~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i-~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~--- 469 (571)
..... -.......+.|+.++-+.|.++-.| +++ +|+|.||||+.|+..+.++|+.++.+|.+++...
T Consensus 103 ~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI--~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~ 180 (362)
T d2pl5a1 103 PLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGI--EKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSA 180 (362)
T ss_dssp TTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTC--SSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCH
T ss_pred ccccccccccccCcCCccchhHHHHHHHHHHHHHhCc--CeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCH
Confidence 11000 0123345688988888888776444 344 4889999999999999999999999998775431
Q ss_pred ------------------ccc--cc----------------------chhhhhhcCCCC--------CChhhhc------
Q 008274 470 ------------------WDG--YD----------------------TFYTEKYMGLPS--------EDPVGYE------ 493 (571)
Q Consensus 470 ------------------~~~--~~----------------------~~~~~~~~g~~~--------~~~~~~~------ 493 (571)
|.. |. ..+.+++..... ...+.|.
T Consensus 181 ~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k 260 (362)
T d2pl5a1 181 MQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGES 260 (362)
T ss_dssp HHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCC
T ss_pred HHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHH
Confidence 100 00 001111110000 0001111
Q ss_pred ---cCC---------------c------chhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCC-CCC
Q 008274 494 ---YSS---------------V------MHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPD-ERH 548 (571)
Q Consensus 494 ---~~s---------------~------~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~-~~H 548 (571)
..+ + ...+++|+.|+|+|..+.|...|+++.+.+++.|..++++++++.++. .||
T Consensus 261 ~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~GH 340 (362)
T d2pl5a1 261 FVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGH 340 (362)
T ss_dssp SSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSS
T ss_pred HHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCCc
Confidence 011 1 123678899999999999999999999999999999999999887754 588
Q ss_pred CCCCCCcHHHHHHHHHHHHHH
Q 008274 549 MPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 549 ~~~~~~~~~~~~~~i~~fl~~ 569 (571)
.- ...+...+.+.|.+||+.
T Consensus 341 da-FL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 341 DS-FLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp GG-GGSCCHHHHHHHHHHHHC
T ss_pred ch-hccCHHHHHHHHHHHHcC
Confidence 53 223456688889999863
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.30 E-value=3.5e-12 Score=119.74 Aligned_cols=123 Identities=18% Similarity=0.162 Sum_probs=83.3
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEE-cCccCCcccccchhhhh-hcCCCCC-----ChhhhccCCcchh
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVS-GAPVTSWDGYDTFYTEK-YMGLPSE-----DPVGYEYSSVMHH 500 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~-~~g~~~~-----~~~~~~~~s~~~~ 500 (571)
..+|++||+|+|+|+||+||+.+++.+|++|++++. +++...+-......... ..+.+.. ....+...++...
T Consensus 6 y~iDp~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~p~~ca~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 85 (318)
T d2d81a1 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIASV 85 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCG
T ss_pred cCCCccceEEEEECHHHHHHHHHHHhcccceeeeEEEeccCchhhhcccchHHHhhcCCCCCcChhHHHHHHhhcCCcch
Confidence 358999999999999999999999999999975433 33322111111111111 1111111 1122223333333
Q ss_pred hccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcC--CCeeEEEcCCCCCCC
Q 008274 501 VHKMKGKLLLVHGMIDENVHFRHTARLINALVAAR--KPYEILIFPDERHMP 550 (571)
Q Consensus 501 ~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~--~~~~~~~~~~~~H~~ 550 (571)
......|+||+||++|.+|++.++.+++++|++.+ .+++++.+++++|++
T Consensus 86 ~~~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~f 137 (318)
T d2d81a1 86 ANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTF 137 (318)
T ss_dssp GGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSE
T ss_pred hccCCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCC
Confidence 33445799999999999999999999999998864 478889999999997
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.26 E-value=2.7e-11 Score=116.21 Aligned_cols=215 Identities=13% Similarity=0.102 Sum_probs=135.4
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHH-----H----hccCCCCCchhH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEAS-----I----KHNCGRIDAEDQ 417 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~-----~----~~~~~~~~~~D~ 417 (571)
.+-++||++|+-.++.....-|..-. ...+.+--..|-||++|..|++.......+. . -.+.....+.|+
T Consensus 42 ~~~NaVlv~h~ltg~~~~~~WW~~li-G~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~yg~~FP~~ti~D~ 120 (376)
T d2vata1 42 SRDNCVIVCHTLTSSAHVTSWWPTLF-GQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDD 120 (376)
T ss_dssp TSCCEEEEECCTTCCSCGGGTCGGGB-STTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHH
T ss_pred CCCCEEEEcCCCcCCccccccHHHhC-CCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCcccccCCcchhHHH
Confidence 35589999999777766443332111 1123445578999999999875321111100 0 123345578899
Q ss_pred HHHHHHHHHcCCCcCCcE-EEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC---------------------ccc--c
Q 008274 418 LTGAEWLIKQGLAKVGHI-GLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS---------------------WDG--Y 473 (571)
Q Consensus 418 ~~~~~~l~~~~~~d~~~i-~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~---------------------~~~--~ 473 (571)
..+-+.|+++- .-+++ +|+|+||||+.|+..+..+|+++..+|.+++..- |.. |
T Consensus 121 v~aq~~ll~~L--GI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~~~~~~ai~~Dp~w~~G~Y 198 (376)
T d2vata1 121 VRIHRQVLDRL--GVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQCIYDDPKYLDGEY 198 (376)
T ss_dssp HHHHHHHHHHH--TCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHHHHHSTTSGGGTC
T ss_pred HHHHHHHHHHh--CcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHHHHHHHHHHHhhccccccCCCc
Confidence 99877777653 23465 7899999999999999999999988888765331 100 0
Q ss_pred -----------------------cchhhhhhcCCC-------------------------------CCChhhhc------
Q 008274 474 -----------------------DTFYTEKYMGLP-------------------------------SEDPVGYE------ 493 (571)
Q Consensus 474 -----------------------~~~~~~~~~g~~-------------------------------~~~~~~~~------ 493 (571)
...+.+++...+ ....+.|.
T Consensus 199 ~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~vesyL~~~g~k 278 (376)
T d2vata1 199 DVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQK 278 (376)
T ss_dssp CTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CGGGHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcccccccccccccccchhHHHHHHHHHHhh
Confidence 001111111000 00001110
Q ss_pred ------------------c--------CCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcC-CC
Q 008274 494 ------------------Y--------SSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFP-DE 546 (571)
Q Consensus 494 ------------------~--------~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~~ 546 (571)
. .+....+.+|++|+|++.++.|...|+++.+.+++.| ++.++.+++ ..
T Consensus 279 ~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~~l----~~a~~~~I~S~~ 354 (376)
T d2vata1 279 FAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSI----PNSRLCVVDTNE 354 (376)
T ss_dssp HHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHS----TTEEEEECCCSC
T ss_pred hhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHhc----CCCeEEEECCCC
Confidence 0 1223347788999999999999999999999998877 467888888 56
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHH
Q 008274 547 RHMPRRHRDRIYMEERIWEFIER 569 (571)
Q Consensus 547 ~H~~~~~~~~~~~~~~i~~fl~~ 569 (571)
||.- ..-+.+.+.+.|.+||++
T Consensus 355 GHDa-FL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 355 GHDF-FVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp GGGH-HHHTHHHHHHHHHHHHTC
T ss_pred Cccc-cccCHHHHHHHHHHHHcC
Confidence 8852 122466788888888864
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.23 E-value=2.1e-12 Score=117.16 Aligned_cols=187 Identities=12% Similarity=0.012 Sum_probs=109.4
Q ss_pred CceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc
Q 008274 348 PYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ 427 (571)
Q Consensus 348 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 427 (571)
+.|.||++||..++.. .|..+++.|. +|.|+.+|++|.+.. ++++.+.++.+.
T Consensus 16 ~~~~l~~lhg~~g~~~-------~~~~la~~L~--~~~v~~~~~~g~~~~----------------a~~~~~~i~~~~-- 68 (230)
T d1jmkc_ 16 QEQIIFAFPPVLGYGL-------MYQNLSSRLP--SYKLCAFDFIEEEDR----------------LDRYADLIQKLQ-- 68 (230)
T ss_dssp CSEEEEEECCTTCCGG-------GGHHHHHHCT--TEEEEEECCCCSTTH----------------HHHHHHHHHHHC--
T ss_pred CCCeEEEEcCCCCCHH-------HHHHHHHHCC--CCEEeccCcCCHHHH----------------HHHHHHHHHHhC--
Confidence 4588999999877654 3555677774 799999999986521 334444444431
Q ss_pred CCCcCCcEEEEeechHHHHHHHHHhcCC---CeeEEEEEcCccCCccc--c----cch---hhhhhcCCCC--CChh---
Q 008274 428 GLAKVGHIGLYGWSYGGYLSAITLARFP---DVFQCAVSGAPVTSWDG--Y----DTF---YTEKYMGLPS--EDPV--- 490 (571)
Q Consensus 428 ~~~d~~~i~l~G~S~GG~~a~~~~~~~~---~~~~~~v~~~~~~~~~~--~----~~~---~~~~~~g~~~--~~~~--- 490 (571)
...++.|+||||||.+++.++.++| ..+..++...+...... . ... ...+...... ....
T Consensus 69 ---~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (230)
T d1jmkc_ 69 ---PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKH 145 (230)
T ss_dssp ---CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHH
T ss_pred ---CCCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhhhhhhhhhhccccccccccHHHHH
Confidence 3467999999999999998887654 34444444333211000 0 000 0000000000 0000
Q ss_pred --------hhccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCC-CCCCcHHHHHH
Q 008274 491 --------GYEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMP-RRHRDRIYMEE 561 (571)
Q Consensus 491 --------~~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~-~~~~~~~~~~~ 561 (571)
.+...........+++|+++++|++|..++.... .+.+ ....+++++.+++ +|.. ...+....+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~i~~p~l~i~g~~D~~~~~~~~-~w~~---~~~~~~~~~~i~g-~H~~ml~~~~~~~va~ 220 (230)
T d1jmkc_ 146 GLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPEWLA-SWEE---ATTGAYRMKRGFG-THAEMLQGETLDRNAG 220 (230)
T ss_dssp HHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCTTEE-CSGG---GBSSCEEEEECSS-CGGGTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcccccccccCcceeeeecCCcccchhHH-HHHH---hccCCcEEEEEcC-CChhhcCCccHHHHHH
Confidence 0000111123456789999999999998885421 2211 2235788888986 8974 33344577888
Q ss_pred HHHHHHHH
Q 008274 562 RIWEFIER 569 (571)
Q Consensus 562 ~i~~fl~~ 569 (571)
.|.+||++
T Consensus 221 ~I~~~L~~ 228 (230)
T d1jmkc_ 221 ILLEFLNT 228 (230)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhh
Confidence 88899875
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.21 E-value=3e-10 Score=114.71 Aligned_cols=106 Identities=11% Similarity=-0.018 Sum_probs=70.9
Q ss_pred eeeeeeecccceeeeec-c----CCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCce
Q 008274 5 FHVLQTHGLAEYIAQEE-M----DRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVK 79 (571)
Q Consensus 5 ~~~~~~~g~~~~~~~~~-~----~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 79 (571)
+.+++.+|...=+.... + .....+.|||||++|+|.+..... + ++ ...
T Consensus 39 ~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~--------------~-------r~------s~~ 91 (470)
T d2bgra1 39 LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQ--------------W-------RH------SYT 91 (470)
T ss_dssp EEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEEC--------------S-------SS------CEE
T ss_pred EEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcce--------------e-------ee------ccC
Confidence 34566666554333222 2 124678999999999997643211 0 00 012
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEE
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~ 151 (571)
..++++|+++++.+.++ .....+..+.|||||+.++|..++ +||+.+..+|+..+++.
T Consensus 92 ~~~~l~d~~~~~~~~l~---------~~~~~~~~~~~SPDG~~ia~~~~~-----~l~~~~~~~g~~~~~t~ 149 (470)
T d2bgra1 92 ASYDIYDLNKRQLITEE---------RIPNNTQWVTWSPVGHKLAYVWNN-----DIYVKIEPNLPSYRITW 149 (470)
T ss_dssp EEEEEEETTTTEECCSS---------CCCTTEEEEEECSSTTCEEEEETT-----EEEEESSTTSCCEECCS
T ss_pred ceEEEEECCCCcccccc---------cCCccccccccccCcceeeEeecc-----cceEEECCCCceeeeee
Confidence 46899999999876553 345567789999999999997543 49999999998877654
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.20 E-value=2.8e-10 Score=109.84 Aligned_cols=165 Identities=12% Similarity=0.063 Sum_probs=112.9
Q ss_pred eeeeeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEE
Q 008274 5 FHVLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGV 84 (571)
Q Consensus 5 ~~~~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~ 84 (571)
|..++..|..--+.. -.+...+.|||||++|++...+++. .|++
T Consensus 27 ~v~d~~~~~~~~~~~--~~~v~~~~~spDg~~l~~~~~~~g~----------------------------------~v~v 70 (360)
T d1k32a3 27 FIQDVSGTYVLKVPE--PLRIRYVRRGGDTKVAFIHGTREGD----------------------------------FLGI 70 (360)
T ss_dssp EEECTTSSBEEECSC--CSCEEEEEECSSSEEEEEEEETTEE----------------------------------EEEE
T ss_pred EEEECCCCcEEEccC--CCCEEEEEECCCCCEEEEEEcCCCC----------------------------------EEEE
Confidence 444454444333321 1345779999999999997655322 4789
Q ss_pred EECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCc
Q 008274 85 VSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCF 164 (571)
Q Consensus 85 ~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~ 164 (571)
||+++++.+++. .....+..+.|||||+.+++...+. .++.+++++++...+.........
T Consensus 71 ~d~~~~~~~~~~---------~~~~~v~~~~~spdg~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~------ 131 (360)
T d1k32a3 71 YDYRTGKAEKFE---------ENLGNVFAMGVDRNGKFAVVANDRF----EIMTVDLETGKPTVIERSREAMIT------ 131 (360)
T ss_dssp EETTTCCEEECC---------CCCCSEEEEEECTTSSEEEEEETTS----EEEEEETTTCCEEEEEECSSSCCC------
T ss_pred EECCCCcEEEee---------CCCceEEeeeecccccccceecccc----ccccccccccceeeeeeccccccc------
Confidence 999999887663 3456677899999999888876555 489999999998777653322110
Q ss_pred ccCCCCCccCCCe--EEEEEecC-------CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCC
Q 008274 165 TPLDKGVTKYSGG--FIWASEKT-------GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 165 ~~~~~~~~~~~d~--~~~~s~~~-------g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~ 230 (571)
...+++|+ +++..... +..++++++..+++...++.+...+... .|+|||+.|++.+.+.
T Consensus 132 -----~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~spdg~~l~~~s~~~ 200 (360)
T d1k32a3 132 -----DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAP-AFDADSKNLYYLSYRS 200 (360)
T ss_dssp -----CEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEE-EECTTSCEEEEEESCC
T ss_pred -----chhhccceeeeeeeccccccceeeccccceeeeccccCceeeecccccccccc-cccCCCCEEEEEeCCC
Confidence 01345554 55444332 2357888999999888888876666555 4999999999988754
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.18 E-value=5.7e-12 Score=118.13 Aligned_cols=204 Identities=13% Similarity=0.034 Sum_probs=115.2
Q ss_pred CCceEEEEEcCC--CCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHH-HHH
Q 008274 347 PPYKTLISVYGG--PCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTG-AEW 423 (571)
Q Consensus 347 ~~~P~vv~~hGg--~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~ 423 (571)
...|.|+++||. +++. ..|..++..|.. ++.|+.+|++|++.+........ ...++++.+. ++.
T Consensus 58 ~~~~~l~c~~~~~~~g~~-------~~y~~la~~L~~-~~~V~al~~pG~~~~~~~~~~~~-----~~s~~~~a~~~~~~ 124 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGP-------HEFLRLSTSFQE-ERDFLAVPLPGYGTGTGTGTALL-----PADLDTALDAQARA 124 (283)
T ss_dssp CCCCEEEEECCCCTTCST-------TTTHHHHHTTTT-TCCEEEECCTTCCBC---CBCCE-----ESSHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCCCCCH-------HHHHHHHHhcCC-CceEEEEeCCCCCCCCCCccccc-----cCCHHHHHHHHHHH
Confidence 355888999983 2221 134445556554 79999999999876542111000 0123333332 233
Q ss_pred HHHcCCCcCCcEEEEeechHHHHHHHHHhcC----CCeeEEEEEcCccCCcccc-cchh----hhhhc-CCC-CCChhh-
Q 008274 424 LIKQGLAKVGHIGLYGWSYGGYLSAITLARF----PDVFQCAVSGAPVTSWDGY-DTFY----TEKYM-GLP-SEDPVG- 491 (571)
Q Consensus 424 l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~----~~~~~~~v~~~~~~~~~~~-~~~~----~~~~~-g~~-~~~~~~- 491 (571)
+... ....++.|+||||||.+++.++.+. +..+..+++.++....... ...+ ..... ... ......
T Consensus 125 i~~~--~~~~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 202 (283)
T d2h7xa1 125 ILRA--AGDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARL 202 (283)
T ss_dssp HHHH--HTTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHHHHHHHHTCSSCCCHHHH
T ss_pred HHHh--cCCCceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhhHHHhhcccccccccHHH
Confidence 3332 1346799999999999999888753 4567777776654322111 0000 00000 000 000000
Q ss_pred -----hccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCCCCCCCcHHHHHHHHHHH
Q 008274 492 -----YEYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHMPRRHRDRIYMEERIWEF 566 (571)
Q Consensus 492 -----~~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 566 (571)
+...........+++|+++++|++|..++......+.+.+ ...++++.+|+ +|.....++...+.+.|.+|
T Consensus 203 ~a~~~~~~~~~~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~---~~~~~~~~v~G-~H~~ml~e~~~~vA~~i~~~ 278 (283)
T d2h7xa1 203 LAMGRYARFLAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHW---DLPHTVADVPG-DHFTMMRDHAPAVAEAVLSW 278 (283)
T ss_dssp HHHHHHHHHHHSCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCC---SSCSEEEEESS-CTTHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccccCCCeEEEEeCCCCCCCHHHHHHHHHhC---CCCcEEEEEcC-CCcccccCCHHHHHHHHHHH
Confidence 0000001123567899999999999999877655443322 34678889987 78632335677888999999
Q ss_pred HHH
Q 008274 567 IER 569 (571)
Q Consensus 567 l~~ 569 (571)
|++
T Consensus 279 L~~ 281 (283)
T d2h7xa1 279 LDA 281 (283)
T ss_dssp HHH
T ss_pred HHh
Confidence 986
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.11 E-value=3e-10 Score=106.18 Aligned_cols=160 Identities=12% Similarity=0.001 Sum_probs=97.1
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
.+.|| |++||...+.. ...+..+++.|+++||.|+.+|++|.+...... ..+++.++++++.+
T Consensus 30 ~~~PV-vlvHG~~~~~~-----~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~~~-----------sae~la~~i~~v~~ 92 (317)
T d1tcaa_ 30 VSKPI-LLVPGTGTTGP-----QSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQV-----------NTEYMVNAITALYA 92 (317)
T ss_dssp CSSEE-EEECCTTCCHH-----HHHTTTHHHHHHTTTCEEEEECCTTTTCSCHHH-----------HHHHHHHHHHHHHH
T ss_pred CCCcE-EEECCCCCCCc-----chhHHHHHHHHHhCCCeEEEecCCCCCCCchHh-----------HHHHHHHHHHHHHH
Confidence 45575 56899654432 111344688999999999999999876443211 14567788888877
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCC---eeEEEEEcCccCCcccccchhhhhhcCCCCCChhhhccCCc-chhhc
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPD---VFQCAVSGAPVTSWDGYDTFYTEKYMGLPSEDPVGYEYSSV-MHHVH 502 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~s~-~~~~~ 502 (571)
.. ..++|.|+||||||.++.+++.++|+ +++.+|.+++...-..+...+.......| ........++ +..+.
T Consensus 93 ~~--g~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~Gt~~a~~~~~~~~~~p--a~~q~~~~s~fl~~L~ 168 (317)
T d1tcaa_ 93 GS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAP--SVWQQTTGSALTTALR 168 (317)
T ss_dssp HT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHHTTCBCH--HHHHTBTTCHHHHHHH
T ss_pred hc--cCCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCCCCcccccchhhhhccCc--hhhhhcCCcHHHHHHH
Confidence 64 34689999999999999999998874 58888888775432111111100000000 0000011111 11111
Q ss_pred c-----CCCcEEEEecCCCCCCChHHHHHH
Q 008274 503 K-----MKGKLLLVHGMIDENVHFRHTARL 527 (571)
Q Consensus 503 ~-----~~~p~lli~G~~D~~v~~~~~~~~ 527 (571)
. -..|++.|++..|.+|.++.+..+
T Consensus 169 ~~~~~~~~V~~t~I~s~~D~iV~P~~~~~~ 198 (317)
T d1tcaa_ 169 NAGGLTQIVPTTNLYSATDEIVQPQVSNSP 198 (317)
T ss_dssp HTTTTBCSSCEEEEECTTCSSSCCCCSSST
T ss_pred hCCCCCCCCCEEEEecCCCcccCccccchh
Confidence 1 125899999999999988765443
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.05 E-value=2.7e-10 Score=108.30 Aligned_cols=108 Identities=17% Similarity=0.113 Sum_probs=77.4
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
.++|+| ++||..+.......+ ..|..+...|+++||.|+++|+||.|.+..... ..+++.+.++.+.+
T Consensus 7 ~k~Pvv-lvHG~~g~~~~~~~~-~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~----------~~~~l~~~i~~~~~ 74 (319)
T d1cvla_ 7 TRYPVI-LVHGLAGTDKFANVV-DYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNG----------RGEQLLAYVKQVLA 74 (319)
T ss_dssp CSSCEE-EECCTTBSSEETTTE-ESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTS----------HHHHHHHHHHHHHH
T ss_pred CCCCEE-EECCCCCCcchhhhh-hhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc----------cHHHHHHHHHHHHH
Confidence 467875 589976654422211 134557889999999999999999875532110 13445555555554
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
.. +.+++.++||||||.++..++.++|++++.++.+++..
T Consensus 75 ~~--~~~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 75 AT--GATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPH 114 (319)
T ss_dssp HH--CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred Hh--CCCCEEEEeccccHHHHHHHHHHCccccceEEEECCCC
Confidence 32 45789999999999999999999999999999887654
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=2.9e-10 Score=105.64 Aligned_cols=93 Identities=15% Similarity=0.054 Sum_probs=57.3
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
++.| ||++||++++.. .|..++. ..++.|+.+|.||.+.+..- ... ..|..+.+. +
T Consensus 24 ~~~P-l~l~Hg~~gs~~-------~~~~l~~---~L~~~v~~~d~~g~~~~~~~--~~~--------a~~~~~~~~---~ 79 (286)
T d1xkta_ 24 SERP-LFLVHPIEGSTT-------VFHSLAS---RLSIPTYGLQCTRAAPLDSI--HSL--------AAYYIDCIR---Q 79 (286)
T ss_dssp CSCC-EEEECCTTCCCG-------GGHHHHH---TCSSCEEEECCCTTSCCSCH--HHH--------HHHHHHHHH---H
T ss_pred CCCe-EEEECCCCccHH-------HHHHHHH---HcCCeEEEEeCCCCCCCCCH--HHH--------HHHHHHHHH---H
Confidence 4456 568999888754 2333333 34789999999998765321 110 222333332 2
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGA 465 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~ 465 (571)
. .+..++.++|||+||.+++.+|.++|+++..++...
T Consensus 80 ~--~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~ 116 (286)
T d1xkta_ 80 V--QPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 116 (286)
T ss_dssp H--CCSSCCEEEEETHHHHHHHHHHHHHHHC------CC
T ss_pred h--cCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEE
Confidence 2 145689999999999999999999998877655443
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.95 E-value=1.3e-09 Score=101.18 Aligned_cols=105 Identities=18% Similarity=0.139 Sum_probs=73.8
Q ss_pred CCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHH
Q 008274 346 PPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLI 425 (571)
Q Consensus 346 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~ 425 (571)
+.++|+ |++||..+...... ...|....+.|.++||.|+++|++|.+.... . .+++.+.++.+.
T Consensus 5 ~~~~Pv-vlvHG~~g~~~~~~--~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~~---~----------a~~l~~~i~~~~ 68 (285)
T d1ex9a_ 5 QTKYPI-VLAHGMLGFDNILG--VDYWFGIPSALRRDGAQVYVTEVSQLDTSEV---R----------GEQLLQQVEEIV 68 (285)
T ss_dssp CCSSCE-EEECCTTCCSEETT--EESSTTHHHHHHHTTCCEEEECCCSSSCHHH---H----------HHHHHHHHHHHH
T ss_pred CCCCCE-EEECCCCCCccccc--hhhHHHHHHHHHhCCCEEEEeCCCCCCCcHH---H----------HHHHHHHHHHHH
Confidence 357895 77899655433211 1224557889999999999999998764321 1 233444444444
Q ss_pred HcCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccC
Q 008274 426 KQGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVT 468 (571)
Q Consensus 426 ~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~ 468 (571)
+.. ..+++.++||||||.++..++.++|++++.++.++...
T Consensus 69 ~~~--g~~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 69 ALS--GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp HHH--CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred HHc--CCCeEEEEEECccHHHHHHHHHHCCccceeEEEECCCC
Confidence 332 45689999999999999999999999999999876543
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=98.94 E-value=4.8e-10 Score=114.88 Aligned_cols=132 Identities=15% Similarity=0.164 Sum_probs=87.1
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC-CCC--hhhhHHHHhcc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-ARR--GLKFEASIKHN 408 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~~--~~~~~~~~~~~ 408 (571)
|..-+|.|... ...+++||||++|||.........|....-.....+++++++||+++||-. -|. ....... .
T Consensus 98 L~LnI~~P~~~-~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~---~ 173 (534)
T d1llfa_ 98 LTINVVRPPGT-KAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAE---G 173 (534)
T ss_dssp CEEEEEECTTC-CTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHH---T
T ss_pred CEEEEEECCCC-CCCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccc---c
Confidence 67778888654 234789999999998865432222322111112345578999999999942 111 1111111 1
Q ss_pred CCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc-C-------CCeeEEEEEcCcc
Q 008274 409 CGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR-F-------PDVFQCAVSGAPV 467 (571)
Q Consensus 409 ~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~-~-------~~~~~~~v~~~~~ 467 (571)
.|...+.|++.|++|+.+. ..-|+++|.|+|+|.||..+...+.. . ..+|+.+|+.+|.
T Consensus 174 ~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs 243 (534)
T d1llfa_ 174 SGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred ccccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCc
Confidence 2334589999999999985 33699999999999999988765541 1 1369999998864
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=98.91 E-value=1.1e-09 Score=112.45 Aligned_cols=131 Identities=16% Similarity=0.230 Sum_probs=87.5
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCC----CCCChhhhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG----TARRGLKFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG----~~~~~~~~~~~~~~ 407 (571)
|..-+|.|... ...+++||||++|||.........+...........+..+++||+++||- .-..+ +.....
T Consensus 106 L~LnI~~P~~~-~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~-~~~~~~-- 181 (544)
T d1thga_ 106 LYLNVFRPAGT-KPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGD-AITAEG-- 181 (544)
T ss_dssp CEEEEEEETTC-CTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSH-HHHHHT--
T ss_pred CEEEEEECCCC-CCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCc-hhhccc--
Confidence 66777888754 23368999999999876544222222111111223457899999999993 21111 111111
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--------CCeeEEEEEcCcc
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--------PDVFQCAVSGAPV 467 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--------~~~~~~~v~~~~~ 467 (571)
.+...+.|++.|++|+.+. ..-|+++|.|+|+|.||..+...++.. ..+|+.+|+.+|.
T Consensus 182 -~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 182 -NTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp -CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred -cccHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence 2333489999999999886 345999999999999999888776532 2489999987764
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=6.5e-10 Score=114.07 Aligned_cols=125 Identities=19% Similarity=0.302 Sum_probs=88.3
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC----CCChhhhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT----ARRGLKFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~----~~~~~~~~~~~~~ 407 (571)
|..-+|.|... ...+++||||++|||.........+ . -...+++++++||+++||-. -..+. . .
T Consensus 97 L~LnI~~P~~~-~~~~~lPV~v~ihGG~~~~gs~~~~----~-~~~~~~~~~vIvVt~nYRLg~~GFl~~~~---~---~ 164 (532)
T d2h7ca1 97 LYLNIYTPADL-TKKNRLPVMVWIHGGGLMVGAASTY----D-GLALAAHENVVVVTIQYRLGIWGFFSTGD---E---H 164 (532)
T ss_dssp CEEEEEECSCT-TSCCCEEEEEEECCSTTTSCCSTTS----C-CHHHHHHHTCEEEEECCCCHHHHHCCCSS---T---T
T ss_pred CEEEEEECCCC-CCCCCcEEEEEEeCCcccccccccC----C-chhhhhcCceEEEEEeeccCCCccccccc---c---c
Confidence 66677889754 2346799999999987754322222 1 13456789999999999931 11110 0 1
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc--CCCeeEEEEEcCccC
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVT 468 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~--~~~~~~~~v~~~~~~ 468 (571)
..+...+.|++.||+|+.+. ..-|+++|.|+|+|+||..+...+.. ...+|+.+|+.++..
T Consensus 165 ~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 165 SRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp CCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred cccccccHHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 11233489999999999885 34599999999999999999887764 245899999988654
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.83 E-value=2.7e-09 Score=107.88 Aligned_cols=128 Identities=19% Similarity=0.239 Sum_probs=87.8
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCC----CCCChhhhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG----TARRGLKFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG----~~~~~~~~~~~~~~ 407 (571)
|..-+|.|... .+++||||++|||.........+ .+. ....+++.+++||+++||- .-... +... .
T Consensus 82 L~lni~~P~~~---~~~lPV~v~ihGG~~~~g~~~~~--~~~-~~~~~~~~~vVvV~~nYRlg~~GFl~~~-~~~~---~ 151 (483)
T d1qe3a_ 82 LYVNVFAPDTP---SQNLPVMVWIHGGAFYLGAGSEP--LYD-GSKLAAQGEVIVVTLNYRLGPFGFLHLS-SFDE---A 151 (483)
T ss_dssp CEEEEEEECSS---CCSEEEEEEECCSTTTSCCTTSG--GGC-CHHHHHHHTCEEEEECCCCHHHHSCCCT-TTCT---T
T ss_pred CEEEEEECCCC---CCCCceEEEEeecccccCCcccc--ccc-cccccccCceEEEeecccccchhhcccc-cccc---c
Confidence 67778888653 36899999999987654321111 111 1345556789999999993 21001 0001 1
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccCC
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVTS 469 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~~ 469 (571)
..+...+.|++.|++|+.+. ..-|+++|.|+|+|+||..+..++... ..+|+.+|+.+|...
T Consensus 152 ~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 218 (483)
T d1qe3a_ 152 YSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASR 218 (483)
T ss_dssp SCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCC
T ss_pred cccccccHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCcc
Confidence 12334589999999999885 345999999999999999998887642 358999999887643
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=98.78 E-value=7.6e-09 Score=105.33 Aligned_cols=128 Identities=16% Similarity=0.124 Sum_probs=85.6
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHH-HhCCcEEEEECCCC----CCCChhhhHHHHh
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYL-RSKGILVWKLDNRG----TARRGLKFEASIK 406 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~rG----~~~~~~~~~~~~~ 406 (571)
|..-+|.|... ...+++||+|++|||.........+ ......+ .+.+++||+++||- .-..+ +.. .
T Consensus 81 L~LnI~~P~~~-~~~~~~PV~v~ihGG~~~~G~~~~~----~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~-~~~--~- 151 (517)
T d1ukca_ 81 LFINVFKPSTA-TSQSKLPVWLFIQGGGYAENSNANY----NGTQVIQASDDVIVFVTFNYRVGALGFLASE-KVR--Q- 151 (517)
T ss_dssp CEEEEEEETTC-CTTCCEEEEEEECCSTTTSCCSCSC----CCHHHHHHTTSCCEEEEECCCCHHHHHCCCH-HHH--H-
T ss_pred CEEEEEeCCCC-CCCCCceEEEEEcCCccccCCCccc----cchhhhhhhccccceEEEEecccceeecCcc-ccc--c-
Confidence 66667788753 2336789999999987654422222 1112223 35779999999993 11111 111 1
Q ss_pred ccCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc----CCCeeEEEEEcCccC
Q 008274 407 HNCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR----FPDVFQCAVSGAPVT 468 (571)
Q Consensus 407 ~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~----~~~~~~~~v~~~~~~ 468 (571)
...+...+.|++.|++|+.+. ..-|+++|.|+|+|+||..+...+.. ...+|+.+|+.+|..
T Consensus 152 ~~~~N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~ 220 (517)
T d1ukca_ 152 NGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 220 (517)
T ss_dssp SSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred ccccchhHHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeeccccc
Confidence 111234489999999999885 34599999999999999998766543 224899999988754
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=98.75 E-value=2.2e-06 Score=79.36 Aligned_cols=184 Identities=8% Similarity=-0.032 Sum_probs=106.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-Ceee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~ 159 (571)
.+.+++..+++...... .........|+|||+.+++....+. .+...+..+++.......... ..+
T Consensus 97 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~- 163 (301)
T d1l0qa2 97 TLSVIDTTSNTVAGTVK---------TGKSPLGLALSPDGKKLYVTNNGDK---TVSVINTVTKAVINTVSVGRSPKGI- 163 (301)
T ss_dssp EEEEEETTTTEEEEEEE---------CSSSEEEEEECTTSSEEEEEETTTT---EEEEEETTTTEEEEEEECCSSEEEE-
T ss_pred eeeecccccceeeeecc---------ccccceEEEeecCCCeeeeeecccc---ceeeeeccccceeeecccCCCceEE-
Confidence 45677777765443211 2234456789999998776654443 478889988876544332211 111
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.+++++ .++.+..+ ...++..+....+............... ++++++.+|+....... ..++
T Consensus 164 ------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~v~~~~~~~--~~v~ 227 (301)
T d1l0qa2 164 ------------AVTPDGTKVYVANFD-SMSISVIDTVTNSVIDTVKVEAAPSGIA-VNPEGTKAYVTNVDKYF--NTVS 227 (301)
T ss_dssp ------------EECTTSSEEEEEETT-TTEEEEEETTTTEEEEEEECSSEEEEEE-ECTTSSEEEEEEECSSC--CEEE
T ss_pred ------------Eeeccccceeeeccc-ccccccccccceeeeecccccCCcceee-cccccccccccccccee--eeee
Confidence 122333 44444443 2334555555554443333333344443 89999999887654432 5677
Q ss_pred EEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 239 CAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 239 ~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.+++. .+. ....+..+.....+.+||||++++...+.. ..|.++++.+++.++.+
T Consensus 228 v~D~~-t~~----~~~~~~~~~~~~~va~spdg~~l~va~~~~---~~i~v~D~~t~~~~~~~ 282 (301)
T d1l0qa2 228 MIDTG-TNK----ITARIPVGPDPAGIAVTPDGKKVYVALSFC---NTVSVIDTATNTITATM 282 (301)
T ss_dssp EEETT-TTE----EEEEEECCSSEEEEEECTTSSEEEEEETTT---TEEEEEETTTTEEEEEE
T ss_pred eeecC-CCe----EEEEEcCCCCEEEEEEeCCCCEEEEEECCC---CeEEEEECCCCeEEEEE
Confidence 78872 221 233444444556679999999875544332 37999999888776655
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.74 E-value=3.2e-09 Score=109.03 Aligned_cols=127 Identities=18% Similarity=0.219 Sum_probs=85.7
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCC----CCCChhhhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRG----TARRGLKFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG----~~~~~~~~~~~~~~ 407 (571)
|..-+|.|... ..+++||||++|||......... ..+.. ....++.+++||+++||- .-..+. ...
T Consensus 97 L~LnI~~P~~~--~~~~lPV~v~ihGG~~~~gs~~~--~~~~~-~~~~~~~~vvvVt~nYRlg~~Gfl~~~~-----~~~ 166 (542)
T d2ha2a1 97 LYLNVWTPYPR--PASPTPVLIWIYGGGFYSGAASL--DVYDG-RFLAQVEGAVLVSMNYRVGTFGFLALPG-----SRE 166 (542)
T ss_dssp CEEEEEEESSC--CSSCEEEEEEECCSTTTCCCTTS--GGGCT-HHHHHHHCCEEEEECCCCHHHHHCCCTT-----CSS
T ss_pred CEEEEEecCCC--CCCCCcEEEEEEECccccccCcc--cccCc-hhhhhhccceeEeeeeeccceeeecccc-----ccc
Confidence 66667788642 33689999999998754321111 11211 233446899999999993 211110 011
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccC
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVT 468 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~ 468 (571)
..|...+.|++.||+|+.+. ..-|+++|.|+|+|+||..+..++... ..+|+.+|+.++..
T Consensus 167 ~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 167 APGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp CCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCCcCCcccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 22333489999999999885 345999999999999999999877643 25899999887643
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.74 E-value=1.8e-09 Score=111.62 Aligned_cols=133 Identities=18% Similarity=0.255 Sum_probs=85.3
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecc--cccccchhhhHHHH-hCCcEEEEECCCCCCCChhhhHHH-Hhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCD--SWINTVDMRAQYLR-SKGILVWKLDNRGTARRGLKFEAS-IKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~--~~~~~~~~~~~~l~-~~G~~v~~~d~rG~~~~~~~~~~~-~~~ 407 (571)
|..-+|.|.......+++||||++|||........ .+...+..-...++ ..+++||+++||-.- .| |... ...
T Consensus 81 L~LNI~~P~~~~~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~-~G--Fl~~~~~~ 157 (579)
T d2bcea_ 81 LYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGP-LG--FLSTGDSN 157 (579)
T ss_dssp CEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHH-HH--HCCCSSTT
T ss_pred CEEEEEECCCCCCCCCCCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccc-cc--cccccccC
Confidence 66777888654333468999999999865432111 11111111134455 457999999999310 00 0000 011
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc--CCCeeEEEEEcCcc
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPV 467 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~--~~~~~~~~v~~~~~ 467 (571)
..+...+.|++.|++|+.+. ..-|+++|.|+|+|.||..+...+.. ...+|+.+|+.++.
T Consensus 158 ~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs 222 (579)
T d2bcea_ 158 LPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp CCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CCccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCC
Confidence 12333489999999999886 34599999999999999999877653 24689999998864
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.69 E-value=5.2e-09 Score=107.07 Aligned_cols=126 Identities=16% Similarity=0.238 Sum_probs=85.7
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC----CCChhhhHHHHhc
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT----ARRGLKFEASIKH 407 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~----~~~~~~~~~~~~~ 407 (571)
|..-+|.|... .+++||+|++|||....... . ...+. ....+++++++||+++||-. -.... ...
T Consensus 92 L~LnI~~P~~~---~~~lPV~v~ihGG~~~~g~~-~-~~~~~-~~~~~~~~~vvvVt~nYRlg~~GFl~~~~-----~~~ 160 (532)
T d1ea5a_ 92 LYLNIWVPSPR---PKSTTVMVWIYGGGFYSGSS-T-LDVYN-GKYLAYTEEVVLVSLSYRVGAFGFLALHG-----SQE 160 (532)
T ss_dssp CEEEEEECSSC---CSSEEEEEEECCSTTTCCCT-T-CGGGC-THHHHHHHTCEEEECCCCCHHHHHCCCTT-----CSS
T ss_pred CEEEEEeCCCC---CCCCcEEEEEEcCCcccccC-C-ccccC-cchhhcccCccEEEEeecccccccccccc-----ccC
Confidence 66677788653 26899999999986543211 1 11121 23456688999999999931 11110 011
Q ss_pred cCCCCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccC
Q 008274 408 NCGRIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVT 468 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~ 468 (571)
..+...+.|++.|++|+.+. ..-|+++|.|+|+|+||..+..++... ..+|+.+|+.++..
T Consensus 161 ~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~ 226 (532)
T d1ea5a_ 161 APGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 226 (532)
T ss_dssp SCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred CCCcccchhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeecccc
Confidence 12333589999999999885 345999999999999999998877642 35799999877654
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.69 E-value=5.7e-06 Score=77.51 Aligned_cols=222 Identities=11% Similarity=-0.017 Sum_probs=123.2
Q ss_pred eeeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEE
Q 008274 7 VLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 86 (571)
Q Consensus 7 ~~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 86 (571)
.++.++...-+|.+.-.....+.|||||++||-...+ ..|.+||
T Consensus 43 ~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~d------------------------------------g~i~iwd 86 (311)
T d1nr0a1 43 VPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH------------------------------------GNVRIWD 86 (311)
T ss_dssp EETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETT------------------------------------SEEEEEE
T ss_pred EECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccC------------------------------------ceEeeee
Confidence 3455666666665544456778899999998754322 1468889
Q ss_pred CCCCceE-EEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE-EEEeecCCeeeccCCc
Q 008274 87 AAGGPVS-WMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV-ILVEELDSWVNLHDCF 164 (571)
Q Consensus 87 l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~-l~~~~~~~w~~~~~~~ 164 (571)
+.+++.. ...+. .....+..+.|+|||+.++......... +.+.+.++++... +..+.+. +.
T Consensus 87 ~~~~~~~~~~~~~-------~~~~~v~~v~~s~d~~~l~~~~~~~~~~--~~v~~~~~~~~~~~l~~h~~~--v~----- 150 (311)
T d1nr0a1 87 TTQTTHILKTTIP-------VFSGPVKDISWDSESKRIAAVGEGRERF--GHVFLFDTGTSNGNLTGQARA--MN----- 150 (311)
T ss_dssp SSSTTCCEEEEEE-------CSSSCEEEEEECTTSCEEEEEECCSSCS--EEEEETTTCCBCBCCCCCSSC--EE-----
T ss_pred eeccccccccccc-------cccCcccccccccccccccccccccccc--ccccccccccccccccccccc--cc-----
Confidence 8876532 22221 2345678899999999877765433222 5556777766432 2111111 10
Q ss_pred ccCCCCCccCCCe-E-EEEEecCCccEEEEEeCCCceeece-eecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEE
Q 008274 165 TPLDKGVTKYSGG-F-IWASEKTGFRHLYLHDINGTCLGPI-TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAK 241 (571)
Q Consensus 165 ~~~~~~~~~~~d~-~-~~~s~~~g~~~l~~~~~~~~~~~~l-T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 241 (571)
.+ .+++++ + +.....+| .|.+++..+++.... ......+..+. |+|+++.|+..+.+.. ..+| +
T Consensus 151 -~v----~~~~~~~~~l~sgs~d~--~i~i~d~~~~~~~~~~~~~~~~i~~v~-~~p~~~~l~~~~~d~~---v~~~--d 217 (311)
T d1nr0a1 151 -SV----DFKPSRPFRIISGSDDN--TVAIFEGPPFKFKSTFGEHTKFVHSVR-YNPDGSLFASTGGDGT---IVLY--N 217 (311)
T ss_dssp -EE----EECSSSSCEEEEEETTS--CEEEEETTTBEEEEEECCCSSCEEEEE-ECTTSSEEEEEETTSC---EEEE--E
T ss_pred -cc----cccccceeeeccccccc--ccccccccccccccccccccccccccc-cCcccccccccccccc---cccc--c
Confidence 01 123333 3 43344445 366777776654333 33344455554 9999998776654332 3444 3
Q ss_pred eCCCCCCCCCCCeEec--------CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 242 LYPDWNHTLEAPVKLT--------NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 242 l~~~g~~~~~~~~~lt--------~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
+. .+. ....+. .......+.|+|++++++.. +.. ..+++.++.+++.++.+.
T Consensus 218 ~~-~~~----~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tg-s~D---g~v~iwd~~t~~~~~~l~ 277 (311)
T d1nr0a1 218 GV-DGT----KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA-SAD---KTIKIWNVATLKVEKTIP 277 (311)
T ss_dssp TT-TCC----EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE-ETT---SEEEEEETTTTEEEEEEE
T ss_pred cc-ccc----ccccccccccccccccccccccccCCCCCEEEEE-eCC---CeEEEEECCCCcEEEEEE
Confidence 31 111 111111 12234566899999987653 332 268888988787666553
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=98.68 E-value=1.7e-08 Score=79.55 Aligned_cols=94 Identities=17% Similarity=0.031 Sum_probs=63.2
Q ss_pred CCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhc
Q 008274 328 DGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKH 407 (571)
Q Consensus 328 dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~ 407 (571)
+|.++++...- +-|.||++||.. ..|. +.| +.+|.|+++|+||+|.+...
T Consensus 9 ~G~~l~y~~~G---------~G~pvlllHG~~------~~w~-------~~L-~~~yrvi~~DlpG~G~S~~p------- 58 (122)
T d2dsta1 9 YGLNLVFDRVG---------KGPPVLLVAEEA------SRWP-------EAL-PEGYAFYLLDLPGYGRTEGP------- 58 (122)
T ss_dssp TTEEEEEEEEC---------CSSEEEEESSSG------GGCC-------SCC-CTTSEEEEECCTTSTTCCCC-------
T ss_pred CCEEEEEEEEc---------CCCcEEEEeccc------cccc-------ccc-cCCeEEEEEeccccCCCCCc-------
Confidence 67777776553 125667799832 1232 223 46999999999999877431
Q ss_pred cCCCCCchhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCCC
Q 008274 408 NCGRIDAEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFPD 456 (571)
Q Consensus 408 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~ 456 (571)
....+++.+.+..+.+.- +.++..|+|||+||.+++.+++..+.
T Consensus 59 ---~~s~~~~a~~i~~ll~~L--~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 59 ---RMAPEELAHFVAGFAVMM--NLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp ---CCCHHHHHHHHHHHHHHT--TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred ---ccccchhHHHHHHHHHHh--CCCCcEEEEeCccHHHHHHHHhhccc
Confidence 123455555555555542 45688999999999999999886544
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.67 E-value=8.5e-09 Score=105.34 Aligned_cols=129 Identities=19% Similarity=0.191 Sum_probs=84.5
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCC-CCChhhhHHHHhccCC
Q 008274 332 LYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT-ARRGLKFEASIKHNCG 410 (571)
Q Consensus 332 l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~-~~~~~~~~~~~~~~~~ 410 (571)
|..-+|.|... .+++||||++|||.......... .+. .....++.+++||+++||-. -|.-. ........+
T Consensus 90 L~lnI~~P~~~---~~~~PV~v~ihGG~~~~gs~~~~--~~~-~~~~~~~~~vVvVt~nYRlg~~Gfl~--~~~~~~~~g 161 (526)
T d1p0ia_ 90 LYLNVWIPAPK---PKNATVLIWIYGGGFQTGTSSLH--VYD-GKFLARVERVIVVSMNYRVGALGFLA--LPGNPEAPG 161 (526)
T ss_dssp CEEEEEEESSC---CSSEEEEEEECCSTTTSCCTTCG--GGC-THHHHHHHCCEEEEECCCCHHHHHCC--CTTCTTSCS
T ss_pred CEEEEEeCCCC---CCCCceEEEEECCCcccccCccc--ccC-ccccccccceeEEecccccccccccC--CCCcccccc
Confidence 66677788653 36889999999987654322111 111 12234567999999999931 11000 000011123
Q ss_pred CCCchhHHHHHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhc--CCCeeEEEEEcCccC
Q 008274 411 RIDAEDQLTGAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLAR--FPDVFQCAVSGAPVT 468 (571)
Q Consensus 411 ~~~~~D~~~~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~--~~~~~~~~v~~~~~~ 468 (571)
...+.|++.|++|+.+. ..-|+++|.|+|+|+||..+..++.. ...+|+.+|+.++..
T Consensus 162 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 162 NMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 224 (526)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred cccccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhcccccc
Confidence 33589999999999885 34599999999999999999777653 235788888876543
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.62 E-value=2e-06 Score=81.97 Aligned_cols=82 Identities=9% Similarity=0.084 Sum_probs=54.6
Q ss_pred EEEeecCcEEEEEEcCCC-----CceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEE
Q 008274 214 VGVNEASGQVYFTGTLDG-----PLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRIL 288 (571)
Q Consensus 214 ~~~s~dg~~l~~~~~~~~-----~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~ 288 (571)
..++++++.+|+...... .....++.+++. .+. ....+..+.....+.+||||+.++++..... ..|+
T Consensus 254 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~-t~~----~~~~~~~~~~~~~~a~spDG~~~l~v~~~~d--~~i~ 326 (355)
T d2bbkh_ 254 VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK-TGE----RLAKFEMGHEIDSINVSQDEKPLLYALSTGD--KTLY 326 (355)
T ss_dssp EEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETT-TCC----EEEEEEEEEEECEEEECCSSSCEEEEEETTT--TEEE
T ss_pred EEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCC-CCc----EEEEecCCCCEEEEEEcCCCCeEEEEEECCC--CEEE
Confidence 458899999998876432 224678888873 222 2334443323345689999997766665433 5899
Q ss_pred EEEcCCCceeEecc
Q 008274 289 LCSLQDGSLVLPLY 302 (571)
Q Consensus 289 ~~~~~~~~~~~~l~ 302 (571)
++|+.+++.++.+.
T Consensus 327 v~D~~tg~~~~~i~ 340 (355)
T d2bbkh_ 327 IHDAESGEELRSVN 340 (355)
T ss_dssp EEETTTCCEEEEEC
T ss_pred EEECCCCCEEEEEe
Confidence 99999998777664
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.60 E-value=5.1e-08 Score=100.43 Aligned_cols=120 Identities=15% Similarity=0.146 Sum_probs=78.8
Q ss_pred CCCceEEEEEcCCCCceeecccccccchhhhHHHH-hCCcEEEEECCCCC----CCChhhh-HHHHhccCCCCCchhHHH
Q 008274 346 PPPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLR-SKGILVWKLDNRGT----ARRGLKF-EASIKHNCGRIDAEDQLT 419 (571)
Q Consensus 346 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~----~~~~~~~-~~~~~~~~~~~~~~D~~~ 419 (571)
.+++||||++|||......... ..+. ...|+ +.+.+||+++||-. -..+... ........+...+.|++.
T Consensus 136 ~~~lPV~V~ihGG~f~~Gs~~~--~~~~--~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~ 211 (571)
T d1dx4a_ 136 TNGLPILIWIYGGGFMTGSATL--DIYN--ADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQAL 211 (571)
T ss_dssp CSSEEEEEEECCSTTTCCCTTC--GGGC--CHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHH
T ss_pred CCCCeEEEEEeCCCccCCCCcc--cccc--hhhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHH
Confidence 4789999999998765331111 1121 34454 45799999999932 1111000 000111223445899999
Q ss_pred HHHHHHHc---CCCcCCcEEEEeechHHHHHHHHHhcC--CCeeEEEEEcCccCC
Q 008274 420 GAEWLIKQ---GLAKVGHIGLYGWSYGGYLSAITLARF--PDVFQCAVSGAPVTS 469 (571)
Q Consensus 420 ~~~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~~~~~--~~~~~~~v~~~~~~~ 469 (571)
|++|+.+. ..-|+++|.|+|+|+||..+...+... ..+|+.+|+.++...
T Consensus 212 AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 212 AIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 99999986 335999999999999999998777642 357898888776543
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.58 E-value=2.2e-05 Score=75.00 Aligned_cols=83 Identities=6% Similarity=-0.025 Sum_probs=55.2
Q ss_pred EEEEeecCcEEEEEEcCCCC-----ceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEE
Q 008274 213 IVGVNEASGQVYFTGTLDGP-----LESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRI 287 (571)
Q Consensus 213 ~~~~s~dg~~l~~~~~~~~~-----~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l 287 (571)
...++++++.+++....... ....+..+++. .+. ....+..+.....+.|||||+.++++..+.. ..+
T Consensus 271 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-t~~----~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d--~~v 343 (373)
T d2madh_ 271 QVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL-VGQ----TSSQISLGHDVDAISVAQDGGPDLYALSAGT--EVL 343 (373)
T ss_pred eeEEecCCCeEEEecCCCceEEeecCCCeEEEEECC-CCc----EEEEecCCCCeeEEEECCCCCEEEEEEeCCC--CeE
Confidence 34588999988877664321 12456667762 222 3445555555667799999998777655533 479
Q ss_pred EEEEcCCCceeEecc
Q 008274 288 LLCSLQDGSLVLPLY 302 (571)
Q Consensus 288 ~~~~~~~~~~~~~l~ 302 (571)
+++|+.+++.++.+.
T Consensus 344 ~v~D~~tg~~~~~~~ 358 (373)
T d2madh_ 344 HIYDAGAGDQDQSTV 358 (373)
T ss_pred EEEECCCCCEEEEEC
Confidence 999999998877664
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.55 E-value=5.8e-06 Score=77.43 Aligned_cols=202 Identities=11% Similarity=0.025 Sum_probs=115.3
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
..+++||||+.|||...+ .++++|+++++...+- .
T Consensus 21 ~~~a~~~~g~~l~~~~~~-------------------------------------~v~i~~~~~~~~~~~~--------~ 55 (311)
T d1nr0a1 21 VVLGNTPAGDKIQYCNGT-------------------------------------SVYTVPVGSLTDTEIY--------T 55 (311)
T ss_dssp CCCEECTTSSEEEEEETT-------------------------------------EEEEEETTCSSCCEEE--------C
T ss_pred EEEEEcCCCCEEEEEeCC-------------------------------------EEEEEECCCCceeEEE--------c
Confidence 358899999999995311 3678899887654442 2
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEee-cCCeeeccCCcccCCCCCccCCCe-EEE-EE
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEE-LDSWVNLHDCFTPLDKGVTKYSGG-FIW-AS 182 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~-~~~w~~~~~~~~~~~~~~~~~~d~-~~~-~s 182 (571)
+....+..+.|||||++++...... .|.+.|+.+++........ ....+. -+ .|++++ +++ .+
T Consensus 56 ~H~~~v~~~~~sp~g~~latg~~dg----~i~iwd~~~~~~~~~~~~~~~~~~v~------~v----~~s~d~~~l~~~~ 121 (311)
T d1nr0a1 56 EHSHQTTVAKTSPSGYYCASGDVHG----NVRIWDTTQTTHILKTTIPVFSGPVK------DI----SWDSESKRIAAVG 121 (311)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTS----EEEEEESSSTTCCEEEEEECSSSCEE------EE----EECTTSCEEEEEE
T ss_pred CCCCCEEEEEEeCCCCeEeccccCc----eEeeeeeeccccccccccccccCccc------cc----ccccccccccccc
Confidence 3456788999999999877654433 3777788877643221111 111111 00 234444 333 33
Q ss_pred ec-CCccEEEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC-C
Q 008274 183 EK-TGFRHLYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-G 259 (571)
Q Consensus 183 ~~-~g~~~l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-~ 259 (571)
+. ....+||. .+.++ ...+....-.+..+ .|+|+++.++.++..++. ..+| ++. .+. ....+.. .
T Consensus 122 ~~~~~~~~v~~--~~~~~~~~~l~~h~~~v~~v-~~~~~~~~~l~sgs~d~~--i~i~--d~~-~~~----~~~~~~~~~ 189 (311)
T d1nr0a1 122 EGRERFGHVFL--FDTGTSNGNLTGQARAMNSV-DFKPSRPFRIISGSDDNT--VAIF--EGP-PFK----FKSTFGEHT 189 (311)
T ss_dssp CCSSCSEEEEE--TTTCCBCBCCCCCSSCEEEE-EECSSSSCEEEEEETTSC--EEEE--ETT-TBE----EEEEECCCS
T ss_pred ccccccccccc--cccccccccccccccccccc-cccccceeeecccccccc--cccc--ccc-ccc----ccccccccc
Confidence 22 23344444 44433 34454433345555 499999987777776653 4444 551 111 1222222 2
Q ss_pred CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 260 KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 260 ~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
.....+.++|++++++..... ..+.+.++.+++....+.
T Consensus 190 ~~i~~v~~~p~~~~l~~~~~d----~~v~~~d~~~~~~~~~~~ 228 (311)
T d1nr0a1 190 KFVHSVRYNPDGSLFASTGGD----GTIVLYNGVDGTKTGVFE 228 (311)
T ss_dssp SCEEEEEECTTSSEEEEEETT----SCEEEEETTTCCEEEECB
T ss_pred ccccccccCcccccccccccc----cccccccccccccccccc
Confidence 234566899999987654432 257888887777655543
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.53 E-value=4.6e-06 Score=80.19 Aligned_cols=82 Identities=4% Similarity=-0.080 Sum_probs=52.8
Q ss_pred EEEeecCcEEEEEEcCCC----CceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEE
Q 008274 214 VGVNEASGQVYFTGTLDG----PLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILL 289 (571)
Q Consensus 214 ~~~s~dg~~l~~~~~~~~----~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~ 289 (571)
..++++++.+|+...... .....++.+++. .+. ....+..+.....+.+||||+.++|...... ..+++
T Consensus 269 ~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~-t~~----~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~--~~v~v 341 (368)
T d1mdah_ 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS-VGQ----TSGPISNGHDSDAIIAAQDGASDNYANSAGT--EVLDI 341 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESS-SCC----EEECCEEEEEECEEEECCSSSCEEEEEETTT--TEEEE
T ss_pred EEEcCCCCEEEEEecCCCceeecCCceEEEEECC-CCc----EeEEecCCCceeEEEECCCCCEEEEEEeCCC--CeEEE
Confidence 358899999988775432 123678888873 221 2222222222334589999998777765543 47999
Q ss_pred EEcCCCceeEecc
Q 008274 290 CSLQDGSLVLPLY 302 (571)
Q Consensus 290 ~~~~~~~~~~~l~ 302 (571)
+|..+++.++.+.
T Consensus 342 ~D~~tgk~~~~i~ 354 (368)
T d1mdah_ 342 YDAASDQDQSSVE 354 (368)
T ss_dssp EESSSCEEEEECC
T ss_pred EECCCCCEEEEEE
Confidence 9998898776654
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.53 E-value=6.5e-08 Score=88.30 Aligned_cols=194 Identities=11% Similarity=-0.055 Sum_probs=104.4
Q ss_pred CceEEEEEcCC--CCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHH-HHHH
Q 008274 348 PYKTLISVYGG--PCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTG-AEWL 424 (571)
Q Consensus 348 ~~P~vv~~hGg--~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~l 424 (571)
..|.|+++||. .++.. .|..+++.|.. .+.|+.+|.+|.+...... .+++++.+. ++.+
T Consensus 41 ~~~~l~c~~~~~~gg~~~-------~y~~La~~L~~-~~~V~al~~pG~~~~e~~~----------~s~~~~a~~~~~~i 102 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPH-------EFTRLAGALRG-IAPVRAVPQPGYEEGEPLP----------SSMAAVAAVQADAV 102 (255)
T ss_dssp CSSEEEEECCCSSSCSGG-------GGHHHHHHHTT-TCCEEEECCTTSSTTCCEE----------SSHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCCCHH-------HHHHHHHhcCC-CceEEEEeCCCcCCCCCCC----------CCHHHHHHHHHHHH
Confidence 34788999973 23221 34445666654 5899999999986432110 013333332 2333
Q ss_pred HHcCCCcCCcEEEEeechHHHHHHHHHhcC---CCeeEEEEEcCccCCccc-ccchhhhhhcC----C--CCCChhhh--
Q 008274 425 IKQGLAKVGHIGLYGWSYGGYLSAITLARF---PDVFQCAVSGAPVTSWDG-YDTFYTEKYMG----L--PSEDPVGY-- 492 (571)
Q Consensus 425 ~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~---~~~~~~~v~~~~~~~~~~-~~~~~~~~~~g----~--~~~~~~~~-- 492 (571)
.+. ....++.|+|||+||.++..++.+. ...+..+++.++...... ....+...... . ........
T Consensus 103 ~~~--~~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a 180 (255)
T d1mo2a_ 103 IRT--QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTA 180 (255)
T ss_dssp HHT--TSSSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHHHHHHHHHTTCC----CCCCHHHHHH
T ss_pred HHh--CCCCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchhhHHHHHHHHhhccccccCCHHHHHH
Confidence 332 2446799999999999999888653 445666666554332110 00011111100 0 00000000
Q ss_pred ----ccCCcchhhccCCCcEEEEecCCCCCCChHHHHHHHHHHHHcCCCeeEEEcCCCCCC-CCCCCcHHHHHHHHHHHH
Q 008274 493 ----EYSSVMHHVHKMKGKLLLVHGMIDENVHFRHTARLINALVAARKPYEILIFPDERHM-PRRHRDRIYMEERIWEFI 567 (571)
Q Consensus 493 ----~~~s~~~~~~~~~~p~lli~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~i~~fl 567 (571)
...-.......+.+|++++.+.+|....... .+. ......++++.+|+ +|. +. .+....+.+.|.+||
T Consensus 181 ~~~~~~~~~~~~~~~~~~p~l~v~a~~~~~~~~~~--~w~---~~~~~~~~~~~v~G-~H~~ml-~~~~~~~A~~i~~~L 253 (255)
T d1mo2a_ 181 LGAYDRLTGQWRPRETGLPTLLVSAGEPMGPWPDD--SWK---PTWPFEHDTVAVPG-DHFTMV-QEHADAIARHIDAWL 253 (255)
T ss_dssp HHHHHHHHHHCCCCCCCCCEEEEECCSSSSCCTTC--CCC---CCCCSSCEEEECCS-CCSSCS-SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccccceEEEeecCCCCCcchhh--HHH---HhCCCCcEEEEECC-CCcccc-cccHHHHHHHHHHHh
Confidence 0000001124567899999998775543321 111 11235788889987 775 53 356777888888998
Q ss_pred H
Q 008274 568 E 568 (571)
Q Consensus 568 ~ 568 (571)
.
T Consensus 254 ~ 254 (255)
T d1mo2a_ 254 G 254 (255)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.52 E-value=2.4e-05 Score=73.86 Aligned_cols=200 Identities=8% Similarity=-0.028 Sum_probs=110.5
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEE-eccCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWM-DLQCGGTD 103 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~-~~~~~~~~ 103 (571)
...+.|||||++|+-...+ + .|.+||+...+.+.. .+
T Consensus 100 I~~v~~s~dg~~l~s~~~d-g-----------------------------------~i~iwd~~~~~~~~~~~~------ 137 (337)
T d1gxra_ 100 IRSCKLLPDGCTLIVGGEA-S-----------------------------------TLSIWDLAAPTPRIKAEL------ 137 (337)
T ss_dssp EEEEEECTTSSEEEEEESS-S-----------------------------------EEEEEECCCC--EEEEEE------
T ss_pred EEEEEEcCCCCEEEEeecc-c-----------------------------------cccccccccccccccccc------
Confidence 3568899999988654322 1 467888876543322 22
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWAS 182 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s 182 (571)
......+....|+||+..++...... .|...|+.+++........... +. .+ .+++++ .++..
T Consensus 138 -~~~~~~v~~~~~~~~~~~l~s~~~d~----~i~~~~~~~~~~~~~~~~~~~~-v~------~l----~~s~~~~~~~~~ 201 (337)
T d1gxra_ 138 -TSSAPACYALAISPDSKVCFSCCSDG----NIAVWDLHNQTLVRQFQGHTDG-AS------CI----DISNDGTKLWTG 201 (337)
T ss_dssp -ECSSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTTEEEEEECCCSSC-EE------EE----EECTTSSEEEEE
T ss_pred -cccccccccccccccccccccccccc----cccccccccccccccccccccc-cc------cc----cccccccccccc
Confidence 12344667789999999877665433 3888999998765443321111 10 00 123333 44444
Q ss_pred ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe-cCCCc
Q 008274 183 EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL-TNGKG 261 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l-t~~~g 261 (571)
..+| .+.++++..++....-.....+..+ .|+++++.|+..+. ++. ..+ .++ ... ..... .....
T Consensus 202 ~~d~--~v~i~d~~~~~~~~~~~~~~~i~~l-~~~~~~~~l~~~~~-d~~--i~i--~d~--~~~----~~~~~~~~~~~ 267 (337)
T d1gxra_ 202 GLDN--TVRSWDLREGRQLQQHDFTSQIFSL-GYCPTGEWLAVGME-SSN--VEV--LHV--NKP----DKYQLHLHESC 267 (337)
T ss_dssp ETTS--EEEEEETTTTEEEEEEECSSCEEEE-EECTTSSEEEEEET-TSC--EEE--EET--TSS----CEEEECCCSSC
T ss_pred cccc--cccccccccceeecccccccceEEE-EEcccccccceecc-ccc--ccc--ccc--ccc----ccccccccccc
Confidence 4444 4666776665432222222234444 48999988776544 332 344 455 222 22222 22334
Q ss_pred eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEe
Q 008274 262 KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLP 300 (571)
Q Consensus 262 ~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~ 300 (571)
...+.++|+|++++... .. ..+.+.++.+++.+..
T Consensus 268 i~~v~~s~~g~~l~s~s-~D---g~i~iwd~~~~~~~~~ 302 (337)
T d1gxra_ 268 VLSLKFAYCGKWFVSTG-KD---NLLNAWRTPYGASIFQ 302 (337)
T ss_dssp EEEEEECTTSSEEEEEE-TT---SEEEEEETTTCCEEEE
T ss_pred cceEEECCCCCEEEEEe-CC---CeEEEEECCCCCEEEE
Confidence 55668999999776433 22 3688888877765443
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.50 E-value=5.3e-05 Score=74.18 Aligned_cols=230 Identities=11% Similarity=0.006 Sum_probs=129.5
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
+...+.|++||+.|.|++.+...... + .. ...... ..++++..+-++......+-..
T Consensus 172 ~~~~~~W~~D~~~~~Y~~~~~~~~~~-------~-----~~-------~~~~~~-~~~v~~h~lgt~~~~d~~v~~e--- 228 (430)
T d1qfma1 172 KFSCMAWTHDGKGMFYNAYPQQDGKS-------D-----GT-------ETSTNL-HQKLYYHVLGTDQSEDILCAEF--- 228 (430)
T ss_dssp CSCCEEECTTSSEEEEEECCCCSSCC-------S-----SS-------CCCCCC-CCEEEEEETTSCGGGCEEEECC---
T ss_pred cccceEEcCCCCEEEEEEeccccCcc-------c-----cc-------ccccCC-cceEEEEECCCCcccccccccc---
Confidence 34789999999999998866432100 0 00 000000 1256777776654321111000
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEe-ccCccEEEEEEECCCCc--------eEEEEEeecCCeeeccCCcccCCCCCccC
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLN-RSQTKLKVLKFDIKTGQ--------RKVILVEELDSWVNLHDCFTPLDKGVTKY 174 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~-r~~~~~~i~~~d~~~g~--------~~~l~~~~~~~w~~~~~~~~~~~~~~~~~ 174 (571)
.+.......+..|+||++++.... .......++.+|+.... ...+.......+. .. ...
T Consensus 229 -~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~ 296 (430)
T d1qfma1 229 -PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-------YV----TNE 296 (430)
T ss_dssp -TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-------EE----EEE
T ss_pred -ccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeecccccceE-------EE----ecC
Confidence 122345566778999997665443 33345678999876532 1222221111111 00 113
Q ss_pred CCeEEEEEecCC-ccEEEEEeCCCce---eecee-ecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCC
Q 008274 175 SGGFIWASEKTG-FRHLYLHDINGTC---LGPIT-EGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHT 249 (571)
Q Consensus 175 ~d~~~~~s~~~g-~~~l~~~~~~~~~---~~~lT-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~ 249 (571)
++.+++.+++++ ...|+.+++.... .+.|- ..+..+... .++..+++|++....++ ...|..+++ .+.
T Consensus 297 ~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~-~~~~~~~~lvl~~~~~~--~~~l~v~~~--~~~-- 369 (430)
T d1qfma1 297 GTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEW-VACVRSNFLVLCYLHDV--KNTLQLHDL--ATG-- 369 (430)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEE-EEEETTTEEEEEEEETT--EEEEEEEET--TTC--
T ss_pred CceeecccCcccccceeEEecCCCCccccceEEecccCcceeee-EEEEECCEEEEEEEcCC--EeEEEEEEC--CCC--
Confidence 445777888765 4789998876543 23332 233323221 24446678888877665 477888888 443
Q ss_pred CCCCeEecCC-CceE-EEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 250 LEAPVKLTNG-KGKH-VAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 250 ~~~~~~lt~~-~g~~-~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
....+... .+.. ..+.+++...+.|.+++..+|+.+|.+++.+++.
T Consensus 370 --~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~ 417 (430)
T d1qfma1 370 --ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL 417 (430)
T ss_dssp --CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred --cEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCc
Confidence 33344333 3332 2244567788999999999999999999987753
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.47 E-value=2.7e-05 Score=76.42 Aligned_cols=215 Identities=14% Similarity=0.101 Sum_probs=123.9
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
.++.+||||+++||.....+. +. ..|+++|+++|+.....+.
T Consensus 128 ~~~~~Spd~~~la~s~d~~G~-e~------------------------------~~l~v~Dl~tg~~~~~~i~------- 169 (430)
T d1qfma1 128 RGYAFSEDGEYFAYGLSASGS-DW------------------------------VTIKFMKVDGAKELPDVLE------- 169 (430)
T ss_dssp EEEEECTTSSEEEEEEEETTC-SC------------------------------EEEEEEETTTTEEEEEEEE-------
T ss_pred cceEecCCCCEEEEEeccccC-ch------------------------------heeEEeccCcceecccccc-------
Confidence 456789999999997654333 22 4689999999987655442
Q ss_pred CCCceeEEEEEccCCeEEEEEEecc------------CccEEEEEEECCCCce--EEEEEeecC-CeeeccCCcccCCCC
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRS------------QTKLKVLKFDIKTGQR--KVILVEELD-SWVNLHDCFTPLDKG 170 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~------------~~~~~i~~~d~~~g~~--~~l~~~~~~-~w~~~~~~~~~~~~~ 170 (571)
......+.|++|++.+++..... +....+++..+.+... ..+.++.+. .|.-. .
T Consensus 170 --~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~------~--- 238 (430)
T d1qfma1 170 --RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGG------A--- 238 (430)
T ss_dssp --EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE------E---
T ss_pred --cccccceEEcCCCCEEEEEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEe------e---
Confidence 11124578999999777664321 2234788888887653 455554333 23211 0
Q ss_pred CccCCCe-EEEEEec---CCccEEEEEeCCCcee--------eceeec-CeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 171 VTKYSGG-FIWASEK---TGFRHLYLHDINGTCL--------GPITEG-DWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 171 ~~~~~d~-~~~~s~~---~g~~~l~~~~~~~~~~--------~~lT~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
..+.++ +++++.. .+-..+|..++..... ..+... .... . .+..+|..+|+.++.+.+ +..|
T Consensus 239 -~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~Tn~~a~-~~~L 313 (430)
T d1qfma1 239 -ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-D--YVTNEGTVFTFKTNRHSP-NYRL 313 (430)
T ss_dssp -EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-E--EEEEETTEEEEEECTTCT-TCEE
T ss_pred -eccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeecccccce-E--EEecCCceeecccCcccc-ccee
Confidence 123443 5554333 2346788888543221 112111 1111 1 144577889999998775 6789
Q ss_pred EEEEeCCCCCCCCCCCeEecCCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 238 YCAKLYPDWNHTLEAPVKLTNGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~lt~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
+++++. ..........++..+. .....++..+.+++..... +..+.|.++++.+++.
T Consensus 314 ~~~~~~--~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~-~~~~~l~v~~~~~~~~ 371 (430)
T d1qfma1 314 INIDFT--DPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH-DVKNTLQLHDLATGAL 371 (430)
T ss_dssp EEEETT--BCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEE-TTEEEEEEEETTTCCE
T ss_pred EEecCC--CCccccceEEecccCcceeeeEEEEECCEEEEEEEc-CCEeEEEEEECCCCcE
Confidence 999983 2211112344544333 3333455555677776654 3556899999866654
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.42 E-value=2.9e-05 Score=74.45 Aligned_cols=213 Identities=9% Similarity=-0.017 Sum_probs=114.8
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
...+.|||||+.||....+ ..|.+||+++++...+..-
T Consensus 10 It~~~~s~dg~~la~~~~~------------------------------------~~i~iw~~~~~~~~~~~~l------ 47 (371)
T d1k8kc_ 10 ISCHAWNKDRTQIAICPNN------------------------------------HEVHIYEKSGNKWVQVHEL------ 47 (371)
T ss_dssp CCEEEECTTSSEEEEECSS------------------------------------SEEEEEEEETTEEEEEEEE------
T ss_pred eEEEEECCCCCEEEEEeCC------------------------------------CEEEEEECCCCCEEEEEEe------
Confidence 4678999999999875321 1467889888765544321
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeec-CCeeeccCCcccCCCCCccCCCe-EEEEE
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEEL-DSWVNLHDCFTPLDKGVTKYSGG-FIWAS 182 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~-~~w~~~~~~~~~~~~~~~~~~d~-~~~~s 182 (571)
.+....+..+.|+|||++|+...... .|.+.|+.+++.+....... ...+. .+ .|++++ .++..
T Consensus 48 ~gH~~~V~~l~fsp~~~~l~s~s~D~----~i~vWd~~~~~~~~~~~~~~~~~~v~------~i----~~~p~~~~l~~~ 113 (371)
T d1k8kc_ 48 KEHNGQVTGVDWAPDSNRIVTCGTDR----NAYVWTLKGRTWKPTLVILRINRAAR------CV----RWAPNEKKFAVG 113 (371)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTS----CEEEEEEETTEEEEEEECCCCSSCEE------EE----EECTTSSEEEEE
T ss_pred cCCCCCEEEEEECCCCCEEEEEECCC----eEEEEeeccccccccccccccccccc------cc----ccccccccceee
Confidence 23456788999999999877664322 26666777766544332211 11110 01 234444 55555
Q ss_pred ecCCccEEEEEeCCCceeeceee---cCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCC--------CC
Q 008274 183 EKTGFRHLYLHDINGTCLGPITE---GDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHT--------LE 251 (571)
Q Consensus 183 ~~~g~~~l~~~~~~~~~~~~lT~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~--------~~ 251 (571)
..++.-.+|.++........... ....+... .|+|+|+.|+..+ .++. ..+|........... ..
T Consensus 114 s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v-~~~p~~~~l~s~s-~D~~--v~v~~~~~~~~~~~~~~~~~~~~~~ 189 (371)
T d1k8kc_ 114 SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSL-DWHPNSVLLAAGS-CDFK--CRIFSAYIKEVEERPAPTPWGSKMP 189 (371)
T ss_dssp ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEE-EECTTSSEEEEEE-TTSC--EEEEECCCTTTSCCCCCBTTBSCCC
T ss_pred cccCcceeeeeecccccccccccccccccccccc-cccccccceeccc-cCcE--EEEEeeccCcccccccccccccccc
Confidence 56666677777654443221111 12234444 4899998775444 4432 556554321000000 00
Q ss_pred CCeEec---CC-CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 252 APVKLT---NG-KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 252 ~~~~lt---~~-~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
....+. .. .....+.++|+|++++..... ..+.+.++..+..+..+
T Consensus 190 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d----~~i~iwd~~~~~~~~~~ 239 (371)
T d1k8kc_ 190 FGELMFESSSSCGWVHGVCFSANGSRVAWVSHD----STVCLADADKKMAVATL 239 (371)
T ss_dssp TTCEEEECCCCSSCEEEEEECSSSSEEEEEETT----TEEEEEEGGGTTEEEEE
T ss_pred ceeeeeeccCccCcEEEEEeecccccccccccC----CcceEEeeecccceeee
Confidence 001111 11 123556899999987654332 36888887666554433
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.38 E-value=3.5e-05 Score=72.15 Aligned_cols=194 Identities=12% Similarity=0.077 Sum_probs=108.1
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+.+|.++++....... .......+++++||++++...........|+.++..+++...+........
T Consensus 62 ~I~ri~p~g~~~~~~~~~--------~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--- 130 (319)
T d2dg1a1 62 NIFKINPETKEIKRPFVS--------HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAY--- 130 (319)
T ss_dssp EEEEECTTTCCEEEEEEC--------SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCC---
T ss_pred EEEEEECCCCeEEEEEeC--------CCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceeeeeccCCCccc---
Confidence 467778887765544332 233455689999998655433222234568999999988766543221111
Q ss_pred cCCcccCCCCCccCCCeEEEEEecC-----CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCcee
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKT-----GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLES 235 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~-----g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 235 (571)
++.. ...++++-+|+++.. ....+|+++.+++..+.+..+-.....+ .|++|++.||++-... .
T Consensus 131 ----~~nd--~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGi-a~s~dg~~lyvad~~~----~ 199 (319)
T d2dg1a1 131 ----CIDD--MVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGI-ALSTDEKVLWVTETTA----N 199 (319)
T ss_dssp ----CEEE--EEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEE-EECTTSSEEEEEEGGG----T
T ss_pred ----CCcc--eeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeee-eeccccceEEEecccC----C
Confidence 1100 012455533444332 2457999999888776665432122334 4999999999987644 4
Q ss_pred EEEEEEeCCCCCCCCCCCeE----ecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 236 HLYCAKLYPDWNHTLEAPVK----LTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 236 ~l~~~~l~~~g~~~~~~~~~----lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.|+++++..++......... .....+-....+.++|+..+.... ...|.+++. +|+.+..+
T Consensus 200 ~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~----~g~V~~~~p-~G~~l~~i 264 (319)
T d2dg1a1 200 RLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG----QGRVLVFNK-RGYPIGQI 264 (319)
T ss_dssp EEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET----TTEEEEECT-TSCEEEEE
T ss_pred ceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcC----CCEEEEECC-CCcEEEEE
Confidence 68888874333200000001 111112345678888875544432 247888885 67665544
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.32 E-value=0.00015 Score=68.92 Aligned_cols=62 Identities=16% Similarity=-0.000 Sum_probs=42.3
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccC------ccEEEEEEECCCCceEEEEE
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQ------TKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~------~~~~i~~~d~~~g~~~~l~~ 151 (571)
..++++|.++++.... +. ......+.|||||+.+++...... ....|.++|+.+++......
T Consensus 47 ~~v~v~D~~tg~~~~~-~~---------~~~~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~ 114 (373)
T d2madh_ 47 IQQWVLDAGSGSILGH-VN---------GGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIE 114 (373)
T ss_pred ceEEEEECCCCCEEEE-Ee---------CCCCccEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEe
Confidence 3689999999887643 21 112335899999998877654332 23468999999998765433
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=98.31 E-value=7.1e-05 Score=73.32 Aligned_cols=190 Identities=11% Similarity=0.045 Sum_probs=108.3
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.++|.++++.... +. .......++|||||++++.. ++++ .|.++|+++++.+.+.+-....- ..
T Consensus 43 ~v~v~D~~t~~v~~~-~~--------~g~~~~~v~fSpDG~~l~~~-s~dg---~v~~~d~~t~~~~~~~~i~~~~~-~~ 108 (432)
T d1qksa2 43 QIALIDGSTYEIKTV-LD--------TGYAVHISRLSASGRYLFVI-GRDG---KVNMIDLWMKEPTTVAEIKIGSE-AR 108 (432)
T ss_dssp EEEEEETTTCCEEEE-EE--------CSSCEEEEEECTTSCEEEEE-ETTS---EEEEEETTSSSCCEEEEEECCSE-EE
T ss_pred EEEEEECCCCcEEEE-Ee--------CCCCeeEEEECCCCCEEEEE-cCCC---CEEEEEeeCCCceEEEEEecCCC-CC
Confidence 578999999887643 21 22356788999999988654 5543 48899999987654433221100 00
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecC--------e----EEEEEEEEeecCcEEEEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGD--------W----MVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~--------~----~~~~~~~~s~dg~~l~~~~ 227 (571)
+..+++ .+++|+ .++.+... -..+.++|..+++........ + .... +.+|++|+.++++.
T Consensus 109 ~~~~s~-----~~SpDG~~l~vs~~~-~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~s~dg~~~~vs~ 181 (432)
T d1qksa2 109 SIETSK-----MEGWEDKYAIAGAYW-PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAA-ILASHYRPEFIVNV 181 (432)
T ss_dssp EEEECC-----STTCTTTEEEEEEEE-TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEE-EEECSSSSEEEEEE
T ss_pred CeEEec-----ccCCCCCEEEEEcCC-CCeEEEEeCccccceeeeccCCccccceeccCCCceeE-EEECCCCCEEEEEE
Confidence 011122 235555 44443321 234677787776654332211 1 1112 24788888888877
Q ss_pred cCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 228 TLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 228 ~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
...+ .+..++.. +.. ......+..+...+.+.++|||++++...... ..+.+++..+++....+
T Consensus 182 ~~~~----~i~~~d~~-~~~--~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~---~~v~v~d~~~~~~~~~~ 245 (432)
T d1qksa2 182 KETG----KILLVDYT-DLN--NLKTTEISAERFLHDGGLDGSHRYFITAANAR---NKLVVIDTKEGKLVAIE 245 (432)
T ss_dssp TTTT----EEEEEETT-CSS--EEEEEEEECCSSEEEEEECTTSCEEEEEEGGG---TEEEEEETTTTEEEEEE
T ss_pred ccCC----eEEEEEcc-CCC--cceEEEEcccCccccceECCCCCEEEEecccc---ceEEEeecccceEEEEe
Confidence 6543 45556652 111 01223344455567789999999876655442 37888888666654433
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.29 E-value=0.00015 Score=68.35 Aligned_cols=136 Identities=13% Similarity=0.003 Sum_probs=74.7
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEecc------CccEEEEEEECCCCceEEEEEee
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRS------QTKLKVLKFDIKTGQRKVILVEE 153 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~------~~~~~i~~~d~~~g~~~~l~~~~ 153 (571)
..++++|.++++.... +. .+....++|||||+.+++..... .....|.++|+++++........
T Consensus 28 ~~v~v~D~~tg~~~~~-~~---------~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~ 97 (355)
T d2bbkh_ 28 TQQFVIDGEAGRVIGM-ID---------GGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELP 97 (355)
T ss_dssp EEEEEEETTTTEEEEE-EE---------ECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET
T ss_pred CeEEEEECCCCcEEEE-EE---------CCCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecC
Confidence 4789999999986543 21 12333689999999776654321 12346999999999876543322
Q ss_pred c-C-CeeeccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceee-ceeecCeEE------EEEEEEeecCcEE
Q 008274 154 L-D-SWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLG-PITEGDWMV------EQIVGVNEASGQV 223 (571)
Q Consensus 154 ~-~-~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~-~lT~~~~~~------~~~~~~s~dg~~l 223 (571)
. . .+.... + ....+++|+ .+++.+......++.++..+++.. .+....... .....+++||+.+
T Consensus 98 ~~~~~~~~~~----~--~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~ 171 (355)
T d2bbkh_ 98 DAPRFLVGTY----P--WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLA 171 (355)
T ss_dssp TCCCCCBSCC----G--GGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEE
T ss_pred CcceeecCCC----C--ceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEE
Confidence 1 1 111110 0 011234554 444445444556777777666543 232222111 1123477888877
Q ss_pred EEEEcCCC
Q 008274 224 YFTGTLDG 231 (571)
Q Consensus 224 ~~~~~~~~ 231 (571)
++.....+
T Consensus 172 ~v~~~~~~ 179 (355)
T d2bbkh_ 172 KVAFGTEG 179 (355)
T ss_dssp EEECCSSS
T ss_pred EEEecCCC
Confidence 77665544
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.24 E-value=1e-05 Score=73.05 Aligned_cols=109 Identities=19% Similarity=0.139 Sum_probs=64.3
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhC--CcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSK--GILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWL 424 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l 424 (571)
++.|+| ++||-.++.. .+ ..+..+.+.+.+. |+.|.++++.....+.. ......+ +.++.+.+...
T Consensus 4 ~P~PVV-LvHGlg~s~~---~~-~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~--~~~~~~~-----~~~~~e~v~~~ 71 (279)
T d1ei9a_ 4 APLPLV-IWHGMGDSCC---NP-LSMGAIKKMVEKKIPGIHVLSLEIGKTLREDV--ENSFFLN-----VNSQVTTVCQI 71 (279)
T ss_dssp SSCCEE-EECCTTCCSC---CT-TTTHHHHHHHHHHSTTCCEEECCCSSSHHHHH--HHHHHSC-----HHHHHHHHHHH
T ss_pred CCCcEE-EECCCCCCCC---Ch-HHHHHHHHHHHHHCCCeEEEEEEcCCCccccc--ccchhhh-----HHHHHHHHHHH
Confidence 567865 5899654322 11 1345556667654 99999999764322111 1111111 34444444333
Q ss_pred HHcCCCcCCcEEEEeechHHHHHHHHHhcCCC-eeEEEEEcCcc
Q 008274 425 IKQGLAKVGHIGLYGWSYGGYLSAITLARFPD-VFQCAVSGAPV 467 (571)
Q Consensus 425 ~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~-~~~~~v~~~~~ 467 (571)
++.-..-.+++-++|||+||.++-.++.+.+. .+...|+.++.
T Consensus 72 I~~~~~~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsP 115 (279)
T d1ei9a_ 72 LAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp HHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred HHhccccccceeEEEEccccHHHHHHHHHcCCCCcceEEEECCC
Confidence 33321234689999999999999999988764 46777776543
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.21 E-value=1.1e-06 Score=81.43 Aligned_cols=114 Identities=14% Similarity=0.125 Sum_probs=72.3
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
...|++|++||..++.. ..|.. .....+|...++.|+++|++.... ..+..+... . ....+.+..+|++|.+
T Consensus 68 ~~~pt~iiiHGw~~~~~--~~~~~--~~~~a~l~~~d~NVI~VDW~~~a~--~~Y~~a~~n-~-~~Vg~~ia~~i~~l~~ 139 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGE--ENWLL--DMCKNMFKVEEVNCICVDWKKGSQ--TSYTQAANN-V-RVVGAQVAQMLSMLSA 139 (337)
T ss_dssp TTSEEEEEECCCCCTTC--TTHHH--HHHHHHTTTCCEEEEEEECHHHHS--SCHHHHHHH-H-HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcCCCC--cchHH--HHHHHHHhcCCceEEEEeeccccC--cchHHHHHH-H-HHHHHHHHHHHHHHHH
Confidence 45799999999755432 23321 222345556679999999974221 112111111 0 0013456677877777
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS 469 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~ 469 (571)
+..++.+++.|+|||+||++|..+..+ ...+..+....|...
T Consensus 140 ~~g~~~~~vhlIGhSLGAhvAG~aG~~-~~~l~rItgLDPA~P 181 (337)
T d1rp1a2 140 NYSYSPSQVQLIGHSLGAHVAGEAGSR-TPGLGRITGLDPVEA 181 (337)
T ss_dssp HHCCCGGGEEEEEETHHHHHHHHHHHT-STTCCEEEEESCCCT
T ss_pred hcCCChhheEEEeecHHHhhhHHHHHh-hccccceeccCCCcc
Confidence 656789999999999999999866654 455677777777643
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.14 E-value=0.00027 Score=66.31 Aligned_cols=159 Identities=8% Similarity=-0.039 Sum_probs=90.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.++|+.+++...... .....+..+.|+++++.++...... .|...|+.+++.......... +.
T Consensus 164 ~i~~~~~~~~~~~~~~~--------~~~~~v~~l~~s~~~~~~~~~~~d~----~v~i~d~~~~~~~~~~~~~~~--i~- 228 (337)
T d1gxra_ 164 NIAVWDLHNQTLVRQFQ--------GHTDGASCIDISNDGTKLWTGGLDN----TVRSWDLREGRQLQQHDFTSQ--IF- 228 (337)
T ss_dssp CEEEEETTTTEEEEEEC--------CCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTTEEEEEEECSSC--EE-
T ss_pred ccccccccccccccccc--------ccccccccccccccccccccccccc----cccccccccceeecccccccc--eE-
Confidence 36788998887654432 2345677889999999777765433 488889998875433222211 10
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
.+ .+++++ +++....+| .+.+++..+++..........+..+ .|+|+|+.|+..+ .++ .|+.
T Consensus 229 -----~l----~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~i~~v-~~s~~g~~l~s~s-~Dg----~i~i 291 (337)
T d1gxra_ 229 -----SL----GYCPTGEWLAVGMESS--NVEVLHVNKPDKYQLHLHESCVLSL-KFAYCGKWFVSTG-KDN----LLNA 291 (337)
T ss_dssp -----EE----EECTTSSEEEEEETTS--CEEEEETTSSCEEEECCCSSCEEEE-EECTTSSEEEEEE-TTS----EEEE
T ss_pred -----EE----EEcccccccceecccc--ccccccccccccccccccccccceE-EECCCCCEEEEEe-CCC----eEEE
Confidence 00 123333 555544555 3566666666544443333345555 4999999776544 333 2444
Q ss_pred EEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEE
Q 008274 240 AKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVD 276 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~ 276 (571)
.++. .+. ....+........+.+||++++++.
T Consensus 292 wd~~-~~~----~~~~~~~~~~v~~~~~s~d~~~l~t 323 (337)
T d1gxra_ 292 WRTP-YGA----SIFQSKESSSVLSCDISVDDKYIVT 323 (337)
T ss_dssp EETT-TCC----EEEEEECSSCEEEEEECTTSCEEEE
T ss_pred EECC-CCC----EEEEccCCCCEEEEEEeCCCCEEEE
Confidence 4552 222 2233333334556789999988754
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.13 E-value=2.3e-06 Score=79.15 Aligned_cols=115 Identities=17% Similarity=0.105 Sum_probs=74.8
Q ss_pred CCceEEEEEcCCCCceeecccccccchhhhHHHHhCCcEEEEECCCCCCCChhhhHHHHhccCCCCCchhHHHHHHHHHH
Q 008274 347 PPYKTLISVYGGPCVQLVCDSWINTVDMRAQYLRSKGILVWKLDNRGTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIK 426 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 426 (571)
...|+++++||..++.. ..|.. .....+|....+.|+++|+...... .+..+... . ....+.+..+|+.|..
T Consensus 68 ~~~pt~iiiHG~~~~~~--~~~~~--~~~~a~l~~~d~NVi~VDW~~~a~~--~Y~~a~~n-~-~~Vg~~ia~~i~~l~~ 139 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGE--DGWLL--DMCKKMFQVEKVNCICVDWRRGSRT--EYTQASYN-T-RVVGAEIAFLVQVLST 139 (338)
T ss_dssp TTSEEEEEECCSCCTTC--TTHHH--HHHHHHHTTCCEEEEEEECHHHHSS--CHHHHHHH-H-HHHHHHHHHHHHHHHH
T ss_pred CCCceEEEeCcccCCCC--cccHH--HHHHHHHhcCCceEEEEechhhccc--chHHHHHh-H-HHHHHHHHHHHHHHHH
Confidence 46799999999655432 23322 2223455567799999999743221 12222111 0 0012345567777766
Q ss_pred cCCCcCCcEEEEeechHHHHHHHHHhcCCCeeEEEEEcCccCC
Q 008274 427 QGLAKVGHIGLYGWSYGGYLSAITLARFPDVFQCAVSGAPVTS 469 (571)
Q Consensus 427 ~~~~d~~~i~l~G~S~GG~~a~~~~~~~~~~~~~~v~~~~~~~ 469 (571)
...++.+++.++|||+||++|..+..+.+.++..+....|...
T Consensus 140 ~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P 182 (338)
T d1bu8a2 140 EMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (338)
T ss_dssp HHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred hcCCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCcC
Confidence 6557899999999999999999988777777788888777643
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=98.10 E-value=0.00017 Score=67.10 Aligned_cols=75 Identities=7% Similarity=0.018 Sum_probs=41.0
Q ss_pred EEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec-CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcC
Q 008274 215 GVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQ 293 (571)
Q Consensus 215 ~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt-~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~ 293 (571)
.+++|+++++......+. ..+|.++. ++.. ....... .+..-..+.|||||++++...+..+ -=.+|.++..
T Consensus 236 ~~s~d~~~~~~~~~~~~~--~~~~~~~~--~~~~--~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~-~v~v~~id~~ 308 (333)
T d1ri6a_ 236 HITPDGRHLYACDRTASL--ITVFSVSE--DGSV--LSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSH-HISVYEIVGE 308 (333)
T ss_dssp EECTTSSEEEEEETTTTE--EEEEEECT--TSCC--EEEEEEEECSSSCCCEEECTTSSEEEEECTTTC-EEEEEEEETT
T ss_pred EEecccCceeeecccCCe--EEEEEEcC--CCCE--EEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCC-eEEEEEEECC
Confidence 489999999888776653 66666554 3321 0111111 1122235689999998754432222 1245555665
Q ss_pred CCc
Q 008274 294 DGS 296 (571)
Q Consensus 294 ~~~ 296 (571)
+|+
T Consensus 309 tG~ 311 (333)
T d1ri6a_ 309 QGL 311 (333)
T ss_dssp TTE
T ss_pred CCc
Confidence 554
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.09 E-value=0.0015 Score=59.83 Aligned_cols=206 Identities=14% Similarity=0.008 Sum_probs=118.6
Q ss_pred ceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCCC
Q 008274 26 TGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQN 105 (571)
Q Consensus 26 ~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~~ 105 (571)
+++.|.++...|.|+=.. . ..|+.+|.++++.+...+
T Consensus 21 Egp~wd~~~~~l~wvDi~-~----------------------------------~~I~r~d~~~g~~~~~~~-------- 57 (295)
T d2ghsa1 21 EGPTFDPASGTAWWFNIL-E----------------------------------RELHELHLASGRKTVHAL-------- 57 (295)
T ss_dssp EEEEEETTTTEEEEEEGG-G----------------------------------TEEEEEETTTTEEEEEEC--------
T ss_pred eCCeEECCCCEEEEEECC-C----------------------------------CEEEEEECCCCeEEEEEC--------
Confidence 689999988889774211 1 157889999998776644
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEec
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEK 184 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~ 184 (571)
+.....+.+.+||.+++.. +. .|+++|.++|+.+.+....... +..++... ..++++ +++.+..
T Consensus 58 --~~~~~~i~~~~dg~l~va~--~~----gl~~~d~~tg~~~~l~~~~~~~-----~~~~~nd~--~vd~~G~iw~~~~~ 122 (295)
T d2ghsa1 58 --PFMGSALAKISDSKQLIAS--DD----GLFLRDTATGVLTLHAELESDL-----PGNRSNDG--RMHPSGALWIGTMG 122 (295)
T ss_dssp --SSCEEEEEEEETTEEEEEE--TT----EEEEEETTTCCEEEEECSSTTC-----TTEEEEEE--EECTTSCEEEEEEE
T ss_pred --CCCcEEEEEecCCCEEEEE--eC----ccEEeecccceeeEEeeeecCC-----Ccccceee--EECCCCCEEEEecc
Confidence 2345678889999866543 22 3999999999988776532220 00001000 124555 5554322
Q ss_pred ----CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeE---ec
Q 008274 185 ----TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVK---LT 257 (571)
Q Consensus 185 ----~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~---lt 257 (571)
.+...+|+++ .++.+.+..+-.....+ .|+++++.+|++-+.. ..||+++++.+.......... ++
T Consensus 123 ~~~~~~~g~l~~~~--~g~~~~~~~~~~~~Ng~-~~s~d~~~l~~~dt~~----~~I~~~~~d~~~~~~~~~~~~~~~~~ 195 (295)
T d2ghsa1 123 RKAETGAGSIYHVA--KGKVTKLFADISIPNSI-CFSPDGTTGYFVDTKV----NRLMRVPLDARTGLPTGKAEVFIDST 195 (295)
T ss_dssp TTCCTTCEEEEEEE--TTEEEEEEEEESSEEEE-EECTTSCEEEEEETTT----CEEEEEEBCTTTCCBSSCCEEEEECT
T ss_pred ccccccceeEeeec--CCcEEEEeeccCCccee-eecCCCceEEEeeccc----ceeeEeeecccccccccceEEEeccC
Confidence 2345677665 34555444321112233 5999999999997654 468887773222211111221 22
Q ss_pred CCCc-eEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 258 NGKG-KHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 258 ~~~g-~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
...+ -....+..+|...+..+.+ ..+++++. +|+.+..+
T Consensus 196 ~~~g~pdG~~vD~~GnlWva~~~~----g~V~~~dp-~G~~~~~i 235 (295)
T d2ghsa1 196 GIKGGMDGSVCDAEGHIWNARWGE----GAVDRYDT-DGNHIARY 235 (295)
T ss_dssp TSSSEEEEEEECTTSCEEEEEETT----TEEEEECT-TCCEEEEE
T ss_pred cccccccceEEcCCCCEEeeeeCC----CceEEecC-CCcEeeEe
Confidence 2222 3455788888765554433 37888885 67665544
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=98.09 E-value=0.00091 Score=60.81 Aligned_cols=178 Identities=9% Similarity=0.009 Sum_probs=97.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|.++|+++++.... +. .......++|||||++++.....+. .|.++|+++++.......... ..
T Consensus 13 ~v~v~D~~t~~~~~~-i~--------~g~~p~~va~spdG~~l~v~~~~~~---~i~v~d~~t~~~~~~~~~~~~---~~ 77 (301)
T d1l0qa2 13 NISVIDVTSNKVTAT-IP--------VGSNPMGAVISPDGTKVYVANAHSN---DVSIIDTATNNVIATVPAGSS---PQ 77 (301)
T ss_dssp EEEEEETTTTEEEEE-EE--------CSSSEEEEEECTTSSEEEEEEGGGT---EEEEEETTTTEEEEEEECSSS---EE
T ss_pred EEEEEECCCCeEEEE-EE--------CCCCceEEEEeCCCCEEEEEECCCC---EEEEEECCCCceeeeeecccc---cc
Confidence 478899999876532 21 1223456899999998765544432 499999999976543222111 00
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEE
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYC 239 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 239 (571)
. ..+++++ .++.+... -..+++++..+++.............. .+++||+.+++....+. .+..
T Consensus 78 -----~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dg~~~~~~~~~~~----~~~~ 142 (301)
T d1l0qa2 78 -----G----VAVSPDGKQVYVTNMA-SSTLSVIDTTSNTVAGTVKTGKSPLGL-ALSPDGKKLYVTNNGDK----TVSV 142 (301)
T ss_dssp -----E----EEECTTSSEEEEEETT-TTEEEEEETTTTEEEEEEECSSSEEEE-EECTTSSEEEEEETTTT----EEEE
T ss_pred -----c----cccccccccccccccc-cceeeecccccceeeeeccccccceEE-EeecCCCeeeeeecccc----ceee
Confidence 0 0123333 44443332 345667777666543333222222333 48999999988876553 3444
Q ss_pred EEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 240 AKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 240 ~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
.+.. .+. ....+..........++++++.++..... ...+.+......+
T Consensus 143 ~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 191 (301)
T d1l0qa2 143 INTV-TKA----VINTVSVGRSPKGIAVTPDGTKVYVANFD---SMSISVIDTVTNS 191 (301)
T ss_dssp EETT-TTE----EEEEEECCSSEEEEEECTTSSEEEEEETT---TTEEEEEETTTTE
T ss_pred eecc-ccc----eeeecccCCCceEEEeeccccceeeeccc---cccccccccccee
Confidence 4441 111 23334444445566889999877654332 2355555554333
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.05 E-value=0.0015 Score=63.40 Aligned_cols=191 Identities=8% Similarity=-0.020 Sum_probs=101.4
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.+.+||+++++...- +. .......+++||||++++. .++++ .|.++|+++++...+.+-....- ..
T Consensus 43 ~v~vwD~~t~~~~~~-l~--------~g~~~~~vafSPDGk~l~~-~~~d~---~v~vwd~~t~~~~~~~~i~~~~~-~~ 108 (426)
T d1hzua2 43 QIALVDGDSKKIVKV-ID--------TGYAVHISRMSASGRYLLV-IGRDA---RIDMIDLWAKEPTKVAEIKIGIE-AR 108 (426)
T ss_dssp EEEEEETTTCSEEEE-EE--------CCSSEEEEEECTTSCEEEE-EETTS---EEEEEETTSSSCEEEEEEECCSE-EE
T ss_pred EEEEEECCCCcEEEE-Ee--------CCCCeeEEEECCCCCEEEE-EeCCC---CEEEEEccCCceeEEEEEeCCCC-Cc
Confidence 578899999886432 21 1234667999999997754 45553 48899999998655443221100 00
Q ss_pred cCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCceeeceeecCeE-----------EEEEEEEeecCcEEEEEEc
Q 008274 161 HDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCLGPITEGDWM-----------VEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~-----------~~~~~~~s~dg~~l~~~~~ 228 (571)
+..+++ .+++|+ .++.+... ...+.+++..++....+..+... .......+++++.+++...
T Consensus 109 ~~~~s~-----~~spDG~~l~v~~~~-~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~ 182 (426)
T d1hzua2 109 SVESSK-----FKGYEDRYTIAGAYW-PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 182 (426)
T ss_dssp EEEECC-----STTCTTTEEEEEEEE-SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred ceEEee-----eecCCCCEEEEeecC-CCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecC
Confidence 001112 344555 44443321 12455666666544333221110 0112235667776666554
Q ss_pred CCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 229 LDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 229 ~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
..+ .+..+... ++. ......+..+.......++|++++++..... ...+.+++..+++.....
T Consensus 183 ~~~----~i~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~---~~~~~~~~~~~~~~~~~~ 245 (426)
T d1hzua2 183 ETG----KVLLVNYK-DID--NLTVTSIGAAPFLADGGWDSSHRYFMTAANN---SNKVAVIDSKDRRLSALV 245 (426)
T ss_dssp TTT----EEEEEECS-SSS--SCEEEEEECCSSEEEEEECTTSCEEEEEETT---CSEEEEEETTTTEEEEEE
T ss_pred CCC----eEEEEEec-ccc--ceeeEEeccCCccEeeeECCCCcEEEeeeec---ccceeeeecccccEEEEe
Confidence 332 33334331 111 0122334445556677999999987665433 346778888777655444
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=98.04 E-value=1.3e-05 Score=78.83 Aligned_cols=158 Identities=8% Similarity=-0.038 Sum_probs=84.1
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEE-eccCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWM-DLQCGGTD 103 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~-~~~~~~~~ 103 (571)
..++.+|||||+|+. ...++ .+.+||+++++.+.. .+..+
T Consensus 64 ~~~v~fSpDG~~l~~-~s~dg-----------------------------------~v~~~d~~t~~~~~~~~i~~~--- 104 (432)
T d1qksa2 64 VHISRLSASGRYLFV-IGRDG-----------------------------------KVNMIDLWMKEPTTVAEIKIG--- 104 (432)
T ss_dssp EEEEEECTTSCEEEE-EETTS-----------------------------------EEEEEETTSSSCCEEEEEECC---
T ss_pred eeEEEECCCCCEEEE-EcCCC-----------------------------------CEEEEEeeCCCceEEEEEecC---
Confidence 467889999999954 33211 368899988764322 12100
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCC--CccCCCe-EEE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKG--VTKYSGG-FIW 180 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~--~~~~~d~-~~~ 180 (571)
.........+.|||||+.++......+ .|.++|.++++.......... +.. ...+.+.... ...++++ .++
T Consensus 105 -~~~~~~~~s~~~SpDG~~l~vs~~~~~---~v~i~d~~t~~~~~~~~~~~~-~~~-~~~~~~~~~~~~v~~s~dg~~~~ 178 (432)
T d1qksa2 105 -SEARSIETSKMEGWEDKYAIAGAYWPP---QYVIMDGETLEPKKIQSTRGM-TYD-EQEYHPEPRVAAILASHYRPEFI 178 (432)
T ss_dssp -SEEEEEEECCSTTCTTTEEEEEEEETT---EEEEEETTTCCEEEEEECCEE-CTT-TCCEESCCCEEEEEECSSSSEEE
T ss_pred -CCCCCeEEecccCCCCCEEEEEcCCCC---eEEEEeCccccceeeeccCCc-ccc-ceeccCCCceeEEEECCCCCEEE
Confidence 112234455678899997765544443 388899999998765542211 000 0001111000 0112333 333
Q ss_pred EEecCCccEEEEEeCCCceeec---eeecCeEEEEEEEEeecCcEEEEEEcCC
Q 008274 181 ASEKTGFRHLYLHDINGTCLGP---ITEGDWMVEQIVGVNEASGQVYFTGTLD 230 (571)
Q Consensus 181 ~s~~~g~~~l~~~~~~~~~~~~---lT~~~~~~~~~~~~s~dg~~l~~~~~~~ 230 (571)
.+.. .-..++.++..+.+... +..+.. .... .++|||++++..+...
T Consensus 179 vs~~-~~~~i~~~d~~~~~~~~~~~i~~g~~-~~~~-~~spdg~~~~va~~~~ 228 (432)
T d1qksa2 179 VNVK-ETGKILLVDYTDLNNLKTTEISAERF-LHDG-GLDGSHRYFITAANAR 228 (432)
T ss_dssp EEET-TTTEEEEEETTCSSEEEEEEEECCSS-EEEE-EECTTSCEEEEEEGGG
T ss_pred EEEc-cCCeEEEEEccCCCcceEEEEcccCc-cccc-eECCCCCEEEEecccc
Confidence 3322 23467788766654333 222332 2334 4999999999887654
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=97.96 E-value=0.0012 Score=61.12 Aligned_cols=35 Identities=11% Similarity=-0.008 Sum_probs=20.9
Q ss_pred eEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE
Q 008274 111 LARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV 148 (571)
Q Consensus 111 ~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~ 148 (571)
...+.|||||++++...... .. |...+.+......
T Consensus 85 p~~l~~spDg~~l~v~~~~~-~~--v~~~~~~~~~~~~ 119 (333)
T d1ri6a_ 85 LTHISTDHQGQFVFVGSYNA-GN--VSVTRLEDGLPVG 119 (333)
T ss_dssp CSEEEECTTSSEEEEEETTT-TE--EEEEEEETTEEEE
T ss_pred ceEEEEcCCCCEEeecccCC-Cc--eeeecccccccee
Confidence 44589999999876654333 33 4555555554433
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.81 E-value=0.01 Score=55.87 Aligned_cols=186 Identities=13% Similarity=0.083 Sum_probs=97.0
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
+.++|...++...... .....+..+.|++++..++...... .|...|..+............ ....
T Consensus 145 v~i~~~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~~~~~~~~~----~i~~~d~~~~~~~~~~~~~~~-~~~~- 210 (388)
T d1erja_ 145 IRIWDIENRKIVMILQ--------GHEQDIYSLDYFPSGDKLVSGSGDR----TVRIWDLRTGQCSLTLSIEDG-VTTV- 210 (388)
T ss_dssp EEEEETTTTEEEEEEC--------CCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTTEEEEEEECSSC-EEEE-
T ss_pred cccccccccccccccc--------cccccccccccccccccccccccce----eeeeeeccccccccccccccc-cccc-
Confidence 5778888876554322 2455677889999998776665333 478889988776544332221 1100
Q ss_pred CCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCcee-eceee-------cCeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 162 DCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGTCL-GPITE-------GDWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 162 ~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~~~-~~lT~-------~~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
.+ ...++ +++....+| .|++++...+.. ..+.. ....+..+ .|+++++.|+..+. ++
T Consensus 211 -~~--------~~~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l-~~s~~~~~l~s~~~-d~- 276 (388)
T d1erja_ 211 -AV--------SPGDGKYIAAGSLDR--AVRVWDSETGFLVERLDSENESGTGHKDSVYSV-VFTRDGQSVVSGSL-DR- 276 (388)
T ss_dssp -EE--------CSTTCCEEEEEETTS--CEEEEETTTCCEEEEEC------CCCSSCEEEE-EECTTSSEEEEEET-TS-
T ss_pred -cc--------cCCCCCeEEEEcCCC--eEEEeecccCccceeeccccccccCCCCCEEEE-EECCCCCEEEEEEC-CC-
Confidence 01 12233 555555555 356666554432 22211 11234444 48999987765543 33
Q ss_pred ceeEEEEEEeCCCCCCC----C---CCCeE-ecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 233 LESHLYCAKLYPDWNHT----L---EAPVK-LTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 233 ~~~~l~~~~l~~~g~~~----~---~~~~~-lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
...+|.+.- ..... . ..... .........+.++|+|++++..... ..+++.++.+++.+..+.
T Consensus 277 -~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~d----g~i~vwd~~~~~~~~~l~ 347 (388)
T d1erja_ 277 -SVKLWNLQN--ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD----RGVLFWDKKSGNPLLMLQ 347 (388)
T ss_dssp -EEEEEEC-----------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT----SEEEEEETTTCCEEEEEE
T ss_pred -cEEEEeccC--CccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCC----CEEEEEECCCCcEEEEEe
Confidence 244554321 11000 0 00001 1112234456899999877654332 368888988777665543
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.81 E-value=0.0037 Score=59.03 Aligned_cols=159 Identities=11% Similarity=0.040 Sum_probs=76.9
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecC
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKT 185 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~ 185 (571)
....+..++|+|||++++...... .|...|..+++.......... .+. .. .+.+++ .++....+
T Consensus 120 ~~~~V~~l~~s~~~~~l~s~~~dg----~v~i~~~~~~~~~~~~~~h~~-~v~-----~~-----~~~~~~~~~~~~~~~ 184 (388)
T d1erja_ 120 SDLYIRSVCFSPDGKFLATGAEDR----LIRIWDIENRKIVMILQGHEQ-DIY-----SL-----DYFPSGDKLVSGSGD 184 (388)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTS----CEEEEETTTTEEEEEECCCSS-CEE-----EE-----EECTTSSEEEEEETT
T ss_pred CCCCEEEEEECCCCCcceeccccc----ccccccccccccccccccccc-ccc-----cc-----ccccccccccccccc
Confidence 345678899999999877765433 378889888876543321111 000 00 122333 44444444
Q ss_pred CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec--------
Q 008274 186 GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT-------- 257 (571)
Q Consensus 186 g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt-------- 257 (571)
| .+.+++..+..........-.......+.++++.|+..+ .++. ++..++. .+. ....+.
T Consensus 185 ~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~----i~i~~~~-~~~----~~~~~~~~~~~~~~ 252 (388)
T d1erja_ 185 R--TVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGS-LDRA----VRVWDSE-TGF----LVERLDSENESGTG 252 (388)
T ss_dssp S--EEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEE-TTSC----EEEEETT-TCC----EEEEEC------CC
T ss_pred e--eeeeeeccccccccccccccccccccccCCCCCeEEEEc-CCCe----EEEeecc-cCc----cceeeccccccccC
Confidence 4 455666665544333322212223332444666555444 3332 3333431 111 111111
Q ss_pred CCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 258 NGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 258 ~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
.........++|++++++..... ..+.+.++.++.
T Consensus 253 h~~~v~~l~~s~~~~~l~s~~~d----~~i~iwd~~~~~ 287 (388)
T d1erja_ 253 HKDSVYSVVFTRDGQSVVSGSLD----RSVKLWNLQNAN 287 (388)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT----SEEEEEEC----
T ss_pred CCCCEEEEEECCCCCEEEEEECC----CcEEEEeccCCc
Confidence 11224556899999877653322 367777765444
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.81 E-value=0.0011 Score=60.50 Aligned_cols=197 Identities=10% Similarity=0.038 Sum_probs=99.8
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTD 103 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~ 103 (571)
....+.|||||++|+-.. .++ .|.+||+++++......
T Consensus 14 ~V~~l~~s~dg~~l~s~s-~Dg-----------------------------------~v~vWd~~~~~~~~~~~------ 51 (299)
T d1nr0a2 14 AITALSSSADGKTLFSAD-AEG-----------------------------------HINSWDISTGISNRVFP------ 51 (299)
T ss_dssp CEEEEEECTTSSEEEEEE-TTS-----------------------------------CEEEEETTTCCEEECSS------
T ss_pred CcEEEEECCCCCEEEEEc-CCC-----------------------------------eEEEEECCCCcEEEEEc------
Confidence 345788999999886432 211 36889999987654421
Q ss_pred CCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceE---EEEEeecCCeeeccCCcccCCCCCccCCCe-EE
Q 008274 104 QNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRK---VILVEELDSWVNLHDCFTPLDKGVTKYSGG-FI 179 (571)
Q Consensus 104 ~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~---~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~ 179 (571)
......+..+.|+|||++++... +. .|...+....... .+....... .. . ..+++++ ++
T Consensus 52 -~~h~~~v~~v~~~~~g~~~~~~~--d~---~v~~~~~~~~~~~~~~~~~~~~~~~-~~------~----~~~s~~g~~~ 114 (299)
T d1nr0a2 52 -DVHATMITGIKTTSKGDLFTVSW--DD---HLKVVPAGGSGVDSSKAVANKLSSQ-PL------G----LAVSADGDIA 114 (299)
T ss_dssp -CSCSSCEEEEEECTTSCEEEEET--TT---EEEEECSSSSSSCTTSCCEEECSSC-EE------E----EEECTTSSCE
T ss_pred -CCCCCcEEEEEeeccceeecccc--ee---eEEEeccCCcccccccccccccccc-cc------c----cccccccccc
Confidence 12345678899999998554332 21 2566666543321 111110000 00 0 0122333 33
Q ss_pred EEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCC
Q 008274 180 WASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNG 259 (571)
Q Consensus 180 ~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~ 259 (571)
+.... .++.+++.. +...+... ...... .++++++.|+..+. ++ ...+|.+.- +. ......+...
T Consensus 115 ~~~~~---~~i~~~~~~--~~~~~~~~-~~~~~~-~~s~~~~~l~~g~~-dg--~i~~~d~~~---~~--~~~~~~~~~~ 179 (299)
T d1nr0a2 115 VAACY---KHIAIYSHG--KLTEVPIS-YNSSCV-ALSNDKQFVAVGGQ-DS--KVHVYKLSG---AS--VSEVKTIVHP 179 (299)
T ss_dssp EEEES---SEEEEEETT--EEEEEECS-SCEEEE-EECTTSCEEEEEET-TS--EEEEEEEET---TE--EEEEEEEECS
T ss_pred ccccc---ccccccccc--cccccccc-cccccc-cccccccccccccc-cc--ccccccccc---cc--cccccccccc
Confidence 33222 245555532 22222211 223333 48999987765543 33 255554431 11 0011222233
Q ss_pred CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCcee
Q 008274 260 KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLV 298 (571)
Q Consensus 260 ~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~ 298 (571)
.......++|++++++..... ..+.+.++.++...
T Consensus 180 ~~i~~~~~~~~~~~l~~~~~d----~~i~~~~~~~~~~~ 214 (299)
T d1nr0a2 180 AEITSVAFSNNGAFLVATDQS----RKVIPYSVANNFEL 214 (299)
T ss_dssp SCEEEEEECTTSSEEEEEETT----SCEEEEEGGGTTEE
T ss_pred ccccccccccccccccccccc----cccccccccccccc
Confidence 344566899999987654332 25888887666543
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.79 E-value=0.0008 Score=63.88 Aligned_cols=178 Identities=10% Similarity=-0.036 Sum_probs=86.6
Q ss_pred EEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeec-CCeee
Q 008274 82 LGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEEL-DSWVN 159 (571)
Q Consensus 82 l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~-~~w~~ 159 (571)
+.+||+.+++.... .+ ......+..+.|+||++.++..... ....|+.++.............. ...+.
T Consensus 75 i~vWd~~~~~~~~~~~~-------~~~~~~v~~i~~~p~~~~l~~~s~d--~~i~i~~~~~~~~~~~~~~~~~~~~~~v~ 145 (371)
T d1k8kc_ 75 AYVWTLKGRTWKPTLVI-------LRINRAARCVRWAPNEKKFAVGSGS--RVISICYFEQENDWWVCKHIKKPIRSTVL 145 (371)
T ss_dssp EEEEEEETTEEEEEEEC-------CCCSSCEEEEEECTTSSEEEEEETT--SSEEEEEEETTTTEEEEEEECTTCCSCEE
T ss_pred EEEEeeccccccccccc-------ccccccccccccccccccceeeccc--Ccceeeeeecccccccccccccccccccc
Confidence 57888887765433 22 2234567889999999977765432 23345555554443222211111 11110
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEecCCccEEEEEeCCCc-----------------eeeceeecCeEEEEEEEEeecCc
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEKTGFRHLYLHDINGT-----------------CLGPITEGDWMVEQIVGVNEASG 221 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~~l~~~~~~~~-----------------~~~~lT~~~~~~~~~~~~s~dg~ 221 (571)
. ..+++++ +++....+|.-.+|-...... ...........+..+ .|+|+|+
T Consensus 146 ------~----v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~g~ 214 (371)
T d1k8kc_ 146 ------S----LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGV-CFSANGS 214 (371)
T ss_dssp ------E----EEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEE-EECSSSS
T ss_pred ------c----ccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEE-Eeecccc
Confidence 0 0234554 555555556544443321110 001111112224444 4999999
Q ss_pred EEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 222 QVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 222 ~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
.|+..+. ++ .+...++. .+. ....+.. ......+.|++|++.++. . + ..-+.++..+.
T Consensus 215 ~l~s~~~-d~----~i~iwd~~-~~~----~~~~~~~~~~~v~s~~fs~d~~~la~-g-~-d~~~~~~~~~~ 273 (371)
T d1k8kc_ 215 RVAWVSH-DS----TVCLADAD-KKM----AVATLASETLPLLAVTFITESSLVAA-G-H-DCFPVLFTYDS 273 (371)
T ss_dssp EEEEEET-TT----EEEEEEGG-GTT----EEEEEECSSCCEEEEEEEETTEEEEE-E-T-TSSCEEEEEET
T ss_pred ccccccc-CC----cceEEeee-ccc----ceeeeecccccceeeeecCCCCEEEE-E-c-CCceEEEEeeC
Confidence 8876654 32 34445552 121 2223332 223456789999976543 2 2 23346666664
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=97.79 E-value=0.0051 Score=56.24 Aligned_cols=183 Identities=13% Similarity=0.068 Sum_probs=92.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+.+|.++....... .......++++|||++++.... . +...++..+...+..+.+.......+.+.
T Consensus 50 ~I~~i~p~g~~~~~~~----------~~~~~~gla~~~dG~l~v~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 117 (302)
T d2p4oa1 50 EIVSITPDGNQQIHAT----------VEGKVSGLAFTSNGDLVATGWN-A-DSIPVVSLVKSDGTVETLLTLPDAIFLNG 117 (302)
T ss_dssp EEEEECTTCCEEEEEE----------CSSEEEEEEECTTSCEEEEEEC-T-TSCEEEEEECTTSCEEEEEECTTCSCEEE
T ss_pred EEEEEeCCCCEEEEEc----------CCCCcceEEEcCCCCeEEEecC-C-ceEEEEEecccccceeeccccCCccccce
Confidence 4677776654332222 3446677899999985444322 2 22223333444556666655433333221
Q ss_pred cCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeec--------CeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 161 HDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEG--------DWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~--------~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
...++++-++.++. +...+|+++..++........ .........++.+++.+|+.....
T Consensus 118 ----------i~~~~~g~~~v~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~~~-- 184 (302)
T d2p4oa1 118 ----------ITPLSDTQYLTADS-YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEK-- 184 (302)
T ss_dssp ----------EEESSSSEEEEEET-TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTT--
T ss_pred ----------eEEccCCCEEeecc-ccccceeeeccCCcceeEecCCccceeeccCcccccccccccCCceeeecCCC--
Confidence 02245555555444 345788888777653322111 001111223456788899887654
Q ss_pred ceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCce
Q 008274 233 LESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSL 297 (571)
Q Consensus 233 ~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~ 297 (571)
..+++++....+. ............-....++++|+.++..... ..+.+++. +++.
T Consensus 185 --~~i~~~~~~~~~~--~~~~~~~~~~~~pdgia~d~dG~l~va~~~~----~~V~~i~p-~G~~ 240 (302)
T d2p4oa1 185 --MLLLRIPVDSTDK--PGEPEIFVEQTNIDDFAFDVEGNLYGATHIY----NSVVRIAP-DRST 240 (302)
T ss_dssp --TEEEEEEBCTTSC--BCCCEEEEESCCCSSEEEBTTCCEEEECBTT----CCEEEECT-TCCE
T ss_pred --CeEEecccccccc--ccccccccCCCCCcceEECCCCCEEEEEcCC----CcEEEECC-CCCE
Confidence 5788888833222 1122222222233456888999744332221 35777765 4543
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.78 E-value=0.0039 Score=57.28 Aligned_cols=98 Identities=10% Similarity=-0.037 Sum_probs=53.5
Q ss_pred EEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC---CCceEE
Q 008274 189 HLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN---GKGKHV 264 (571)
Q Consensus 189 ~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~---~~g~~~ 264 (571)
.|.++++..++. ..+......+..+ .|+|+++.|+..+. ++ .++..++ .... ....+.. ......
T Consensus 207 ~v~i~d~~~~~~~~~~~~h~~~i~~v-~~~p~~~~l~s~s~-d~----~i~~~~~--~~~~---~~~~~~~~~~~~~i~~ 275 (340)
T d1tbga_ 207 SAKLWDVREGMCRQTFTGHESDINAI-CFFPNGNAFATGSD-DA----TCRLFDL--RADQ---ELMTYSHDNIICGITS 275 (340)
T ss_dssp EEEEEETTTTEEEEEECCCSSCEEEE-EECTTSSEEEEEET-TS----CEEEEET--TTTE---EEEEECCTTCCSCEEE
T ss_pred eEEEEECCCCcEEEEEeCCCCCeEEE-EECCCCCEEEEEeC-CC----eEEEEee--cccc---cccccccccccCceEE
Confidence 566677666553 3333333345555 48999987766554 33 2333444 2210 1222221 123456
Q ss_pred EEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 265 AVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
+.+++++++++..... ..++++++.+++.+..+
T Consensus 276 ~~~s~~~~~l~~g~~d----g~i~iwd~~~~~~~~~~ 308 (340)
T d1tbga_ 276 VSFSKSGRLLLAGYDD----FNCNVWDALKADRAGVL 308 (340)
T ss_dssp EEECSSSCEEEEEETT----SCEEEEETTTCCEEEEE
T ss_pred EEECCCCCEEEEEECC----CEEEEEECCCCcEEEEE
Confidence 6899999877654332 35888888777655443
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.74 E-value=0.00029 Score=68.45 Aligned_cols=139 Identities=13% Similarity=0.129 Sum_probs=76.2
Q ss_pred EEcCC-CcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeecccccc--------cch--hhhHHHHhCCcEEEEECCC
Q 008274 324 IQAND-GTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWIN--------TVD--MRAQYLRSKGILVWKLDNR 392 (571)
Q Consensus 324 ~~~~d-g~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~--------~~~--~~~~~l~~~G~~v~~~d~r 392 (571)
++..+ +..+..|++.... .+++.|+|+++-|||+.+.....|.. ... .....+. +=..++.+|.|
T Consensus 21 l~v~~~~~~lfyw~~~s~~---~~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~-~~anllfiD~P 96 (421)
T d1wpxa1 21 LDVEDEDKHFFFWTFESRN---DPAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWN-SNATVIFLDQP 96 (421)
T ss_dssp EECTTSCCEEEEEEECCSS---CTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGG-GSSEEEEECCS
T ss_pred eecCCCCceEEEEEEEeCC---CCCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccc-cccCEEEEecC
Confidence 44433 5678787776543 22567999999999998653221110 000 0000111 12478888955
Q ss_pred -CCCCChhhhHHHHhccCCCCCchhHHHHHHHHHHc-CCC--cCCcEEEEeechHHHHHHHHHhc---CC---CeeEEEE
Q 008274 393 -GTARRGLKFEASIKHNCGRIDAEDQLTGAEWLIKQ-GLA--KVGHIGLYGWSYGGYLSAITLAR---FP---DVFQCAV 462 (571)
Q Consensus 393 -G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~--d~~~i~l~G~S~GG~~a~~~~~~---~~---~~~~~~v 462 (571)
|.|-|-.... ..... ....+|+.++++.+.+. +.. ...++.|.|.||||..+-.++.+ +. --+++++
T Consensus 97 vGtGfSy~~~~-~~~~~--~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~ 173 (421)
T d1wpxa1 97 VNVGFSYSGSS-GVSNT--VAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVL 173 (421)
T ss_dssp TTSTTCBCSSC-CCCSH--HHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEE
T ss_pred CCCCceecCCc-cccch--HHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeE
Confidence 6654421000 00000 01234566666555443 332 23579999999999988766632 22 2467889
Q ss_pred EcCccCC
Q 008274 463 SGAPVTS 469 (571)
Q Consensus 463 ~~~~~~~ 469 (571)
.++|+.+
T Consensus 174 iGng~~d 180 (421)
T d1wpxa1 174 IGNGLTD 180 (421)
T ss_dssp EESCCCC
T ss_pred ecCCccc
Confidence 8888775
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=97.73 E-value=0.0053 Score=56.61 Aligned_cols=98 Identities=5% Similarity=-0.131 Sum_probs=54.1
Q ss_pred EEEEEeCCCceeece--eecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCceEEEE
Q 008274 189 HLYLHDINGTCLGPI--TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKGKHVAV 266 (571)
Q Consensus 189 ~l~~~~~~~~~~~~l--T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g~~~~~ 266 (571)
.+..++...+..... ......+.... +++++..+.+... ..++.+++. .+. ....+..+.....+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~v~v~d~~-~~~----~~~~~~~~~~~~~va 298 (346)
T d1jmxb_ 231 GYLSVDLKTGKTHTQEFADLTELYFTGL-RSPKDPNQIYGVL------NRLAKYDLK-QRK----LIKAANLDHTYYCVA 298 (346)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEE-ECSSCTTEEEEEE------SEEEEEETT-TTE----EEEEEECSSCCCEEE
T ss_pred eEEEEECCCCceEEEEeecccceeEEEE-EeCCCCEEEEecC------CeEEEEECC-CCc----EEEEEcCCCCEEEEE
Confidence 455566555443222 22222233332 6677766665542 246666762 221 222333333445679
Q ss_pred ECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 267 LDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 267 ~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
|||||++++.. +.. ..+.++|..+++.++.+.
T Consensus 299 ~s~DG~~l~v~-~~d---~~v~v~D~~t~~~i~~i~ 330 (346)
T d1jmxb_ 299 FDKKGDKLYLG-GTF---NDLAVFNPDTLEKVKNIK 330 (346)
T ss_dssp ECSSSSCEEEE-SBS---SEEEEEETTTTEEEEEEE
T ss_pred EcCCCCEEEEE-eCC---CcEEEEECccCCEEEEEE
Confidence 99999987653 222 479999998888776654
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.71 E-value=0.0031 Score=57.98 Aligned_cols=218 Identities=10% Similarity=-0.123 Sum_probs=113.9
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCCCC
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGTDQ 104 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~~~ 104 (571)
..++.+||||++++.............. .....+.++|..+++......
T Consensus 84 ~~~v~~s~dg~~l~~~~~~~~~~~~~~~------------------------~~~~~~~~~d~~~~~~~~~~~------- 132 (337)
T d1pbyb_ 84 LFGAALSPDGKTLAIYESPVRLELTHFE------------------------VQPTRVALYDAETLSRRKAFE------- 132 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEE------------------------ECCCEEEEEETTTTEEEEEEE-------
T ss_pred eeeEEEcCCCcEEEEeecCCcceeeecc------------------------ccccceeeccccCCeEEEecc-------
Confidence 4578999999999776543222111000 011256889999887654422
Q ss_pred CCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC----CeeeccCCcccCCCCCccCCCe--E
Q 008274 105 NYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD----SWVNLHDCFTPLDKGVTKYSGG--F 178 (571)
Q Consensus 105 ~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~----~w~~~~~~~~~~~~~~~~~~d~--~ 178 (571)
.......+.|+|||++++.. +.. +..+|..+++.......... .+......+.+.. ..... .
T Consensus 133 --~~~~~~~~~~s~dg~~l~~~-~~~-----~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 200 (337)
T d1pbyb_ 133 --APRQITMLAWARDGSKLYGL-GRD-----LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQH----ESSGVMAT 200 (337)
T ss_dssp --CCSSCCCEEECTTSSCEEEE-SSS-----EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCC----TTTTEEEE
T ss_pred --ccCCceEEEEcCCCCEEEEE-cCC-----cceeeeecCcEEEEeecCCccccceecCCcceeeccc----cccceeee
Confidence 12234457899999976654 222 56789998875443221111 0111111111110 01111 1
Q ss_pred EEEEec-C--------CccEEEEEeCCCceeece--eecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCC
Q 008274 179 IWASEK-T--------GFRHLYLHDINGTCLGPI--TEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWN 247 (571)
Q Consensus 179 ~~~s~~-~--------g~~~l~~~~~~~~~~~~l--T~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~ 247 (571)
...... . ....++.++...+..... .......... .+++++++++... ..+..+++. .+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~i~v~d~~-~~~ 271 (337)
T d1pbyb_ 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFST-AVNPAKTRAFGAY-------NVLESFDLE-KNA 271 (337)
T ss_dssp EEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEE-EECTTSSEEEEEE-------SEEEEEETT-TTE
T ss_pred eeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEE-EecccceEEEEcc-------ccEEEEECC-CCc
Confidence 111111 1 124567777666543322 1112122222 4778888776553 346666772 221
Q ss_pred CCCCCCeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 248 HTLEAPVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 248 ~~~~~~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
....+........+.+||||++++.. +. -..+.+++..+.+.++.+.
T Consensus 272 ----~~~~~~~~~~~~~~~~s~dG~~l~v~-~~---~~~i~v~D~~t~~~v~~i~ 318 (337)
T d1pbyb_ 272 ----SIKRVPLPHSYYSVNVSTDGSTVWLG-GA---LGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp ----EEEEEECSSCCCEEEECTTSCEEEEE-SB---SSEEEEEETTTCCEEEEEE
T ss_pred ----EEEEEcCCCCEEEEEECCCCCEEEEE-eC---CCcEEEEECCCCcEEEEEE
Confidence 23334334444567999999987543 22 2479999998888877663
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.61 E-value=0.00043 Score=65.75 Aligned_cols=51 Identities=12% Similarity=0.057 Sum_probs=32.3
Q ss_pred ccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 187 FRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 187 ~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
..+|+++|..+++. ..+..+. .+..+ .|||||+.++|.++... ..|+.+++
T Consensus 293 ~~~v~v~D~~t~~~~~~~~~~~-~~~~~-a~spDG~~~ly~s~~~~---~~v~v~D~ 344 (368)
T d1mdah_ 293 AENTSSVTASVGQTSGPISNGH-DSDAI-IAAQDGASDNYANSAGT---EVLDIYDA 344 (368)
T ss_dssp EEEEEEEESSSCCEEECCEEEE-EECEE-EECCSSSCEEEEEETTT---TEEEEEES
T ss_pred CceEEEEECCCCcEeEEecCCC-ceeEE-EECCCCCEEEEEEeCCC---CeEEEEEC
Confidence 36899999887653 3444332 34444 49999987655555443 35777787
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.58 E-value=0.0041 Score=60.07 Aligned_cols=179 Identities=12% Similarity=0.075 Sum_probs=90.9
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-CeeeccCCcccCCCCCccCCCeEEEEEecCC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD-SWVNLHDCFTPLDKGVTKYSGGFIWASEKTG 186 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~-~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g 186 (571)
......+.++|||++++...... ..+..++..+++.......... .+. ....+. ....+..+.....+
T Consensus 206 ~~~~~~~~~~~~g~~~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~ 274 (426)
T d1hzua2 206 APFLADGGWDSSHRYFMTAANNS---NKVAVIDSKDRRLSALVDVGKTPHPG-RGANFV-------HPKYGPVWSTSHLG 274 (426)
T ss_dssp CSSEEEEEECTTSCEEEEEETTC---SEEEEEETTTTEEEEEEECSSCCCCS-CCEEEE-------ETTTEEEEEEECTT
T ss_pred CCccEeeeECCCCcEEEeeeecc---cceeeeecccccEEEEeccCCccccc-ceeeee-------cCCCCceEEeccCC
Confidence 44566789999998766554333 2478899999987655443211 110 000000 01122222222222
Q ss_pred ccEEEEEeCCC--------ceeeceeecCeEEEEEEEEeecCcEEEEEEcCC--CCceeEEEEEEeCCCCCCCCCCCeEe
Q 008274 187 FRHLYLHDING--------TCLGPITEGDWMVEQIVGVNEASGQVYFTGTLD--GPLESHLYCAKLYPDWNHTLEAPVKL 256 (571)
Q Consensus 187 ~~~l~~~~~~~--------~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~--~~~~~~l~~~~l~~~g~~~~~~~~~l 256 (571)
-..+...+... .....|......+... .++|||++|+...... +.....|..+++. .+. ...++
T Consensus 275 d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v-~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~-t~~----~~~~~ 348 (426)
T d1hzua2 275 DGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFI-KTHPKSSHLYVDTTFNPDARISQSVAVFDLK-NLD----AKYQV 348 (426)
T ss_dssp TCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCE-ECCTTCSEEEECCTTCSSHHHHTCEEEEETT-CTT----SCCEE
T ss_pred CceEEEeeccccccccccceEeEEEecCCCceeEE-EcCCCCceEEEeecCCCCcccCCEEEEEECC-CCC----cCeEE
Confidence 22233333222 1222232222122233 4899999998754322 1112345556662 222 12222
Q ss_pred ---------cCCC-ceEEEEECCCCCEEEEEeeC-CCCCCEEEEEEcCCCceeEeccC
Q 008274 257 ---------TNGK-GKHVAVLDHNMRNFVDFHDS-LDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 257 ---------t~~~-g~~~~~~s~~g~~~v~~~s~-~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
.... ....+.|||||+++++++.. ......|.+.|..+.+..+.+..
T Consensus 349 ~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~ 406 (426)
T d1hzua2 349 LPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD 406 (426)
T ss_dssp ECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECC
T ss_pred eccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECC
Confidence 1111 24456899999998876643 34556799999888876665544
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.56 E-value=0.014 Score=53.56 Aligned_cols=231 Identities=12% Similarity=0.029 Sum_probs=116.5
Q ss_pred eeeeecccceeeeeccCCCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEE
Q 008274 7 VLQTHGLAEYIAQEEMDRKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVS 86 (571)
Q Consensus 7 ~~~~~g~~~~~~~~~~~~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 86 (571)
++++.-...-| .+.+...++++|.|||+ |.++. ........ +..+|+.+|
T Consensus 3 ~~~~~~~~~~v-~~~~~g~EGpa~d~dG~-ly~~~-~~~~~~~~---------------------------~~g~I~r~d 52 (314)
T d1pjxa_ 3 IPVIEPLFTKV-TEDIPGAEGPVFDKNGD-FYIVA-PEVEVNGK---------------------------PAGEILRID 52 (314)
T ss_dssp SCEECCCCEEE-ECCCTTCEEEEECTTSC-EEEEE-TTCEETTE---------------------------ECCEEEEEC
T ss_pred ccccCcceEEe-ecCCCCCeEeEEeCCCC-EEEEE-Cccccccc---------------------------cCCEEEEEE
Confidence 34444444433 33366678999999997 43432 21111000 112578899
Q ss_pred CCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcc-
Q 008274 87 AAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFT- 165 (571)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~- 165 (571)
.++++...+..... ......-..+.+.+||..++...... .|.++|.+++....+....+.. .+.
T Consensus 53 ~~~~~~~~~~~~~~----~~~~g~P~Gl~~~~dg~~l~vad~~~----~i~~~~~~g~~~~~~~~~~~g~------~~~~ 118 (314)
T d1pjxa_ 53 LKTGKKTVICKPEV----NGYGGIPAGCQCDRDANQLFVADMRL----GLLVVQTDGTFEEIAKKDSEGR------RMQG 118 (314)
T ss_dssp TTTCCEEEEECCEE----TTEECCEEEEEECSSSSEEEEEETTT----EEEEEETTSCEEECCSBCTTSC------BCBC
T ss_pred CCCCcEEEEECCcc----ccCCCcceeEEEeCCCCEEEEEECCC----eEEEEeCCCcEEEEEecccccc------ccCC
Confidence 99887765543200 01122345688999998666553222 3899999887654332221110 111
Q ss_pred cCCCCCccCCCe-EEEEEecC--------------CccEEEEEeCCCceeeceeecCeEEEEEEEEeecCc----EEEEE
Q 008274 166 PLDKGVTKYSGG-FIWASEKT--------------GFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASG----QVYFT 226 (571)
Q Consensus 166 ~~~~~~~~~~d~-~~~~s~~~--------------g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~----~l~~~ 226 (571)
|.. ...++++ +++. +.. ....||+++.++...+.++.-.. ...+ .|+++++ .||++
T Consensus 119 pnd--l~~d~~G~lyvt-d~~~~~~~~~~~~~~~~~~G~v~~~~~dg~~~~~~~~~~~-pNGi-~~~~d~d~~~~~lyv~ 193 (314)
T d1pjxa_ 119 CND--CAFDYEGNLWIT-APAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQF-PNGI-AVRHMNDGRPYQLIVA 193 (314)
T ss_dssp CCE--EEECTTSCEEEE-ECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESS-EEEE-EEEECTTSCEEEEEEE
T ss_pred CcE--EEECCCCCEEEe-cCccCcccccccceeccCCceEEEEeecCceeEeeCCcce-eeee-EECCCCCcceeEEEEE
Confidence 110 0224555 5443 321 12478999887754433332221 1233 3888765 56666
Q ss_pred EcCCCCceeEEEEEEeCCCCCCCCCCCeE---ecCC--CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCc
Q 008274 227 GTLDGPLESHLYCAKLYPDWNHTLEAPVK---LTNG--KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGS 296 (571)
Q Consensus 227 ~~~~~~~~~~l~~~~l~~~g~~~~~~~~~---lt~~--~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~ 296 (571)
-... ..|+++++..++.. ...+. +... .+-....+..+|+.++..... ..|++++...++
T Consensus 194 d~~~----~~i~~~d~~~~g~~--~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~----g~I~~~dp~~g~ 258 (314)
T d1pjxa_ 194 ETPT----KKLWSYDIKGPAKI--ENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS----SHIEVFGPDGGQ 258 (314)
T ss_dssp ETTT----TEEEEEEEEETTEE--EEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT----TEEEEECTTCBS
T ss_pred eecc----cceEEeeccCcccc--ceeeEEEEccccccccceeeEEecCCcEEEEEcCC----CEEEEEeCCCCE
Confidence 4433 56777776323321 01111 1111 122455788888755544322 478888764443
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=97.46 E-value=0.00082 Score=66.29 Aligned_cols=63 Identities=11% Similarity=0.088 Sum_probs=48.7
Q ss_pred CcEEEEecCCCCCCChHHHHHHHHHHH--------Hc--------------------C-----CCeeEEEcCCCCCCCCC
Q 008274 506 GKLLLVHGMIDENVHFRHTARLINALV--------AA--------------------R-----KPYEILIFPDERHMPRR 552 (571)
Q Consensus 506 ~p~lli~G~~D~~v~~~~~~~~~~~l~--------~~--------------------~-----~~~~~~~~~~~~H~~~~ 552 (571)
.++||.+|..|..|+...++.+.++|. +. | .++++..+.++||.. .
T Consensus 373 irVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHmv-P 451 (483)
T d1ac5a_ 373 IEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMV-P 451 (483)
T ss_dssp CEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSH-H
T ss_pred CEEEEEECChhhcCCCHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEECCccccC-c
Confidence 599999999999999999999998873 10 1 268889999999986 3
Q ss_pred CCcHHHHHHHHHHHHHH
Q 008274 553 HRDRIYMEERIWEFIER 569 (571)
Q Consensus 553 ~~~~~~~~~~i~~fl~~ 569 (571)
.......++.+-.||.+
T Consensus 452 ~dqP~~a~~mi~~fl~~ 468 (483)
T d1ac5a_ 452 FDKSLVSRGIVDIYSND 468 (483)
T ss_dssp HHCHHHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHHHhCC
Confidence 34566667777777653
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.36 E-value=0.012 Score=52.79 Aligned_cols=39 Identities=10% Similarity=0.132 Sum_probs=27.3
Q ss_pred CCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE
Q 008274 107 DEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 149 (571)
Q Consensus 107 ~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l 149 (571)
.........|+|+++.++...... .+...|+.+++....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~----~~~~~~~~~~~~~~~ 138 (317)
T d1vyhc1 100 HDHNVSSVSIMPNGDHIVSASRDK----TIKMWEVQTGYCVKT 138 (317)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTS----EEEEEETTTCCEEEE
T ss_pred ccccceeeeccCCCceEEeeccCc----ceeEeecccceeeeE
Confidence 445667789999999777654332 377789998876443
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.31 E-value=0.00026 Score=66.76 Aligned_cols=47 Identities=15% Similarity=0.104 Sum_probs=30.0
Q ss_pred CCceEEEEEcCCCCc----eeecccccccchhhhHHHHhCCcEEEEECCCCC
Q 008274 347 PPYKTLISVYGGPCV----QLVCDSWINTVDMRAQYLRSKGILVWKLDNRGT 394 (571)
Q Consensus 347 ~~~P~vv~~hGg~~~----~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 394 (571)
.++|+|+ +||-.+. ....+.|......+.+.|.+.|+.|+++.....
T Consensus 6 ~~yPIVL-vHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~ 56 (388)
T d1ku0a_ 6 NDAPIVL-LHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPL 56 (388)
T ss_dssp CCCCEEE-ECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSS
T ss_pred CCCCEEE-eCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCc
Confidence 4688866 8994332 112234443222357789999999999988644
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.31 E-value=0.02 Score=51.40 Aligned_cols=171 Identities=13% Similarity=0.069 Sum_probs=88.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC-----
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD----- 155 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~----- 155 (571)
.+.++|+.+++.... + .........+.|+||++.++...... .|...+..+++..........
T Consensus 124 ~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~l~~~~~d~----~v~~~~~~~~~~~~~~~~~~~~i~~~ 191 (317)
T d1vyhc1 124 TIKMWEVQTGYCVKT-F-------TGHREWVRMVRPNQDGTLIASCSNDQ----TVRVWVVATKECKAELREHRHVVECI 191 (317)
T ss_dssp EEEEEETTTCCEEEE-E-------ECCSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred ceeEeecccceeeeE-E-------ccCCCcceeeecccCCCEEEEEeCCC----eEEEEeeccceeeEEEecCCCCceEE
Confidence 467889988765432 1 12345667789999999877665433 278888888775443221111
Q ss_pred CeeeccCCcccC--CCC---CccCCCeEEEEEecCCccEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcC
Q 008274 156 SWVNLHDCFTPL--DKG---VTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTL 229 (571)
Q Consensus 156 ~w~~~~~~~~~~--~~~---~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~ 229 (571)
.|.+........ ... ....+..+++....+| .|.+++..+++. ..+......+..+ .++|+++.|+..+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~i~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~s~~~- 267 (317)
T d1vyhc1 192 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK--TIKMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGKFILSCAD- 267 (317)
T ss_dssp EECCSCGGGGGGGCCSCC-------CCEEEEEETTS--EEEEEETTTTEEEEEEECCSSCEEEE-EECSSSSCEEEEET-
T ss_pred EEeeccccceeeccccceeeeeccCCceeEeccCCC--EEEEEECCCCcEEEEEeCCCCCEEEE-EECCCCCEEEEEEC-
Confidence 111111000000 000 0011122444444444 466677666553 3343333345555 48999987765543
Q ss_pred CCCceeEEEEEEeCCCCCCCCCCCeEecC-CCceEEEEECCCCCEEEE
Q 008274 230 DGPLESHLYCAKLYPDWNHTLEAPVKLTN-GKGKHVAVLDHNMRNFVD 276 (571)
Q Consensus 230 ~~~~~~~l~~~~l~~~g~~~~~~~~~lt~-~~g~~~~~~s~~g~~~v~ 276 (571)
++ .|...++. .+. ....+.. ......+.++|++++++.
T Consensus 268 dg----~i~iwd~~-~~~----~~~~~~~h~~~V~~~~~s~~~~~l~s 306 (317)
T d1vyhc1 268 DK----TLRVWDYK-NKR----CMKTLNAHEHFVTSLDFHKTAPYVVT 306 (317)
T ss_dssp TT----EEEEECCT-TSC----CCEEEECCSSCEEEEEECSSSSCEEE
T ss_pred CC----eEEEEECC-CCc----EEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 33 34444552 222 3444443 233455689999987654
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.14 E-value=0.0027 Score=58.48 Aligned_cols=130 Identities=14% Similarity=0.071 Sum_probs=72.0
Q ss_pred EEEEEECCCCceEE-EeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeee
Q 008274 81 RLGVVSAAGGPVSW-MDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVN 159 (571)
Q Consensus 81 ~l~~~dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~ 159 (571)
.|.+||+++++... +... ........+.+||||++++.+...++ .|+.+|+++|+...-.......-..
T Consensus 12 ~v~v~D~~s~~~~~~i~~~-------~~~~~~~~i~~spDg~~l~v~~~~~~---~v~v~D~~t~~~~~~~~~~~~~~~~ 81 (337)
T d1pbyb_ 12 KLVVIDTEKMAVDKVITIA-------DAGPTPMVPMVAPGGRIAYATVNKSE---SLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEETTTTEEEEEEECT-------TCTTCCCCEEECTTSSEEEEEETTTT---EEEEEETTTCCEEEEEECCBTTEEE
T ss_pred EEEEEECCCCeEEEEEECC-------CCCCCccEEEECCCCCEEEEEECCCC---eEEEEECCCCcEEEEEecCCCcccc
Confidence 68999999987643 4332 12234556899999997766544332 5999999999875433322111100
Q ss_pred ccCCcccCCCCCccCCCe-EEEEEec----------CCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEE
Q 008274 160 LHDCFTPLDKGVTKYSGG-FIWASEK----------TGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTG 227 (571)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~-~~~~s~~----------~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~ 227 (571)
. .. ....+++|+ .++.+.. .+...+..++...++..........+..+ .+++||+.++..+
T Consensus 82 ~--~~----~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~ 153 (337)
T d1pbyb_ 82 K--SL----FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITML-AWARDGSKLYGLG 153 (337)
T ss_dssp E--CT----TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCE-EECTTSSCEEEES
T ss_pred c--ce----eeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEE-EEcCCCCEEEEEc
Confidence 0 00 011234444 3333222 12356677777766543332222123334 4899999988764
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=97.11 E-value=0.00063 Score=63.29 Aligned_cols=75 Identities=16% Similarity=0.082 Sum_probs=52.6
Q ss_pred eEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEE-EeccCCCCCCC
Q 008274 27 GYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSW-MDLQCGGTDQN 105 (571)
Q Consensus 27 ~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~-~~~~~~~~~~~ 105 (571)
++++||||++|+....+ ..|.+||+++++... +.+.
T Consensus 1 g~a~~~~~~~l~~~~~~------------------------------------~~v~v~D~~t~~~~~t~~~~------- 37 (346)
T d1jmxb_ 1 GPALKAGHEYMIVTNYP------------------------------------NNLHVVDVASDTVYKSCVMP------- 37 (346)
T ss_dssp CCCCCTTCEEEEEEETT------------------------------------TEEEEEETTTTEEEEEEECS-------
T ss_pred CccCCCCCcEEEEEcCC------------------------------------CEEEEEECCCCCEEEEEEcC-------
Confidence 46789999998775433 157999999998653 3332
Q ss_pred CCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE
Q 008274 106 YDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV 148 (571)
Q Consensus 106 ~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~ 148 (571)
.......++|||||++++....+++ .|+.+|+++++...
T Consensus 38 -~~~~p~~l~~spDG~~l~v~~~~~~---~v~~~d~~t~~~~~ 76 (346)
T d1jmxb_ 38 -DKFGPGTAMMAPDNRTAYVLNNHYG---DIYGIDLDTCKNTF 76 (346)
T ss_dssp -SCCSSCEEEECTTSSEEEEEETTTT---EEEEEETTTTEEEE
T ss_pred -CCCCcceEEECCCCCEEEEEECCCC---cEEEEeCccCeeee
Confidence 2233457899999997765544432 59999999997654
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.07 E-value=0.015 Score=52.30 Aligned_cols=102 Identities=10% Similarity=-0.009 Sum_probs=57.1
Q ss_pred eeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEecCCcc
Q 008274 110 YLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASEKTGFR 188 (571)
Q Consensus 110 ~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~~~g~~ 188 (571)
....+.|+||++.++...... .|..+|+++++...+........+.. + .+++++ +++....+|.
T Consensus 138 ~~~~~~~s~~~~~l~~g~~dg----~i~~~d~~~~~~~~~~~~~~~~~i~~------~----~~~~~~~~l~~~~~d~~- 202 (299)
T d1nr0a2 138 NSSCVALSNDKQFVAVGGQDS----KVHVYKLSGASVSEVKTIVHPAEITS------V----AFSNNGAFLVATDQSRK- 202 (299)
T ss_dssp CEEEEEECTTSCEEEEEETTS----EEEEEEEETTEEEEEEEEECSSCEEE------E----EECTTSSEEEEEETTSC-
T ss_pred ccccccccccccccccccccc----cccccccccccccccccccccccccc------c----ccccccccccccccccc-
Confidence 455689999999777654333 48888888887655443322222211 0 233444 5555555553
Q ss_pred EEEEEeCCCcee-e---ceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 189 HLYLHDINGTCL-G---PITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 189 ~l~~~~~~~~~~-~---~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
|++++..++.. . .+......+..+ .|+|++++|+..+.
T Consensus 203 -i~~~~~~~~~~~~~~~~~~~h~~~v~~l-~~s~~~~~l~sgs~ 244 (299)
T d1nr0a2 203 -VIPYSVANNFELAHTNSWTFHTAKVACV-SWSPDNVRLATGSL 244 (299)
T ss_dssp -EEEEEGGGTTEESCCCCCCCCSSCEEEE-EECTTSSEEEEEET
T ss_pred -cccccccccccccccccccccccccccc-cccccccceEEEcC
Confidence 66666544322 1 222223345555 49999988776554
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.03 E-value=0.0061 Score=56.28 Aligned_cols=166 Identities=9% Similarity=-0.012 Sum_probs=82.1
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC--eEEEEEecC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG--GFIWASEKT 185 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d--~~~~~s~~~ 185 (571)
...+..+.|+|||+.++......... +...+.++|+......... ..+.. + .++++ .+++....+
T Consensus 115 ~~~v~~v~~s~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~h~-~~v~~------~----~~~~~~~~~~~~~~~d 181 (325)
T d1pgua1 115 AGPISDISWDFEGRRLCVVGEGRDNF--GVFISWDSGNSLGEVSGHS-QRINA------C----HLKQSRPMRSMTVGDD 181 (325)
T ss_dssp SSCEEEEEECTTSSEEEEEECCSSCS--EEEEETTTCCEEEECCSCS-SCEEE------E----EECSSSSCEEEEEETT
T ss_pred cCcEEEEEECCCCCccceeeccccce--EEEEeecccccceeeeecc-ccccc------c----cccccccceEEEeecc
Confidence 34567889999999887766443333 5666777776433221111 11110 0 12222 244444445
Q ss_pred CccEEEEEeCCCcee-ece-e--ecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCCc
Q 008274 186 GFRHLYLHDINGTCL-GPI-T--EGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGKG 261 (571)
Q Consensus 186 g~~~l~~~~~~~~~~-~~l-T--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~g 261 (571)
|. +.+++....+. ..+ + ...-.+..+ .|+||+..+++++..++. ..+| ++. .+. ....+.....
T Consensus 182 ~~--v~~~d~~~~~~~~~~~~~~~~~~~v~~v-~~~pd~~~~l~s~~~d~~--i~iw--d~~-~~~----~~~~l~~~~~ 249 (325)
T d1pgua1 182 GS--VVFYQGPPFKFSASDRTHHKQGSFVRDV-EFSPDSGEFVITVGSDRK--ISCF--DGK-SGE----FLKYIEDDQE 249 (325)
T ss_dssp TE--EEEEETTTBEEEEEECSSSCTTCCEEEE-EECSTTCCEEEEEETTCC--EEEE--ETT-TCC----EEEECCBTTB
T ss_pred cc--cccccccccccceecccccCCCCccEEe-eeccccceeccccccccc--eeee--eec-ccc----cccccccccc
Confidence 53 44555544332 111 1 112234444 499987667777766653 4555 542 221 2222321111
Q ss_pred -e--EEEEE-CCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 262 -K--HVAVL-DHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 262 -~--~~~~~-s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
. ...++ .+||++++.. +.. ..+.+.++.+++.++.+.
T Consensus 250 ~v~~~~~s~~~~dg~~l~s~-s~D---~~i~iwd~~~~~~~~~~~ 290 (325)
T d1pgua1 250 PVQGGIFALSWLDSQKFATV-GAD---ATIRVWDVTTSKCVQKWT 290 (325)
T ss_dssp CCCSCEEEEEESSSSEEEEE-ETT---SEEEEEETTTTEEEEEEE
T ss_pred ccccceeeeeccCCCEEEEE-eCC---CeEEEEECCCCCEEEEEE
Confidence 1 11222 2678877543 332 368888887777665543
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.93 E-value=0.0078 Score=55.49 Aligned_cols=100 Identities=12% Similarity=0.042 Sum_probs=53.1
Q ss_pred EEEEeCCCce-eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC----CCceEE
Q 008274 190 LYLHDINGTC-LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN----GKGKHV 264 (571)
Q Consensus 190 l~~~~~~~~~-~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~----~~g~~~ 264 (571)
+.+++.+.++ ...+......+..+ .|+++++.+++++..++. ..+| ++. .+. ....+.. ......
T Consensus 141 ~~~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~~~~~~~~d~~--v~~~--d~~-~~~----~~~~~~~~~~~~~~v~~ 210 (325)
T d1pgua1 141 GVFISWDSGNSLGEVSGHSQRINAC-HLKQSRPMRSMTVGDDGS--VVFY--QGP-PFK----FSASDRTHHKQGSFVRD 210 (325)
T ss_dssp EEEEETTTCCEEEECCSCSSCEEEE-EECSSSSCEEEEEETTTE--EEEE--ETT-TBE----EEEEECSSSCTTCCEEE
T ss_pred EEEEeecccccceeeeecccccccc-cccccccceEEEeecccc--cccc--ccc-ccc----cceecccccCCCCccEE
Confidence 3334444433 34444334345555 499999887777766652 4444 331 111 1111111 112345
Q ss_pred EEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 265 AVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 265 ~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
+.|+|++..++.+.+... .+.++++.+++.++.+.
T Consensus 211 v~~~pd~~~~l~s~~~d~---~i~iwd~~~~~~~~~l~ 245 (325)
T d1pgua1 211 VEFSPDSGEFVITVGSDR---KISCFDGKSGEFLKYIE 245 (325)
T ss_dssp EEECSTTCCEEEEEETTC---CEEEEETTTCCEEEECC
T ss_pred eeeccccceecccccccc---ceeeeeecccccccccc
Confidence 689997544555444432 58888988888766664
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=96.86 E-value=0.1 Score=47.12 Aligned_cols=150 Identities=8% Similarity=0.049 Sum_probs=74.3
Q ss_pred CceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc-CCcccCCCCCccCCCeEEEEEecCC
Q 008274 108 EEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH-DCFTPLDKGVTKYSGGFIWASEKTG 186 (571)
Q Consensus 108 ~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~-~~~~~~~~~~~~~~d~~~~~s~~~g 186 (571)
......+++.+||++++... . ...|+++|..++................. ....+ .+...+++.++ .++. +
T Consensus 112 ~~~~n~i~~~~~g~~~v~~~--~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--ngi~~~~~~l~-~~~~-~ 183 (302)
T d2p4oa1 112 AIFLNGITPLSDTQYLTADS--Y--RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAA--NGLKRFGNFLY-VSNT-E 183 (302)
T ss_dssp CSCEEEEEESSSSEEEEEET--T--TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSE--EEEEEETTEEE-EEET-T
T ss_pred ccccceeEEccCCCEEeecc--c--cccceeeeccCCcceeEecCCccceeeccCccccc--ccccccCCcee-eecC-C
Confidence 34556788999997544332 2 22599999999876554433211110000 00000 01112233333 3333 3
Q ss_pred ccEEEEEeCCCcee----eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEec---CC
Q 008274 187 FRHLYLHDINGTCL----GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLT---NG 259 (571)
Q Consensus 187 ~~~l~~~~~~~~~~----~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt---~~ 259 (571)
-..||+++.++... ...+.+. ....+ .+++||+ ||+.....+ .|.+++. +|. .....+ ..
T Consensus 184 ~~~i~~~~~~~~~~~~~~~~~~~~~-~pdgi-a~d~dG~-l~va~~~~~----~V~~i~p--~G~----~~~~~~~~~~~ 250 (302)
T d2p4oa1 184 KMLLLRIPVDSTDKPGEPEIFVEQT-NIDDF-AFDVEGN-LYGATHIYN----SVVRIAP--DRS----TTIIAQAEQGV 250 (302)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEESC-CCSSE-EEBTTCC-EEEECBTTC----CEEEECT--TCC----EEEEECGGGTC
T ss_pred CCeEEeccccccccccccccccCCC-CCcce-EECCCCC-EEEEEcCCC----cEEEECC--CCC----EEEEEecCCCC
Confidence 45788888655321 1111121 11223 4888886 777765544 4777766 553 222222 11
Q ss_pred CceEEEEE---CCCCCEEEEEe
Q 008274 260 KGKHVAVL---DHNMRNFVDFH 278 (571)
Q Consensus 260 ~g~~~~~~---s~~g~~~v~~~ 278 (571)
.+-..+.| ++|++.+..+.
T Consensus 251 ~~pt~vafg~~~~D~~~Lyvtt 272 (302)
T d2p4oa1 251 IGSTAVAFGQTEGDCTAIYVVT 272 (302)
T ss_dssp TTEEEEEECCSTTTTTEEEEEE
T ss_pred CCceEEEEcCCCCCCCEEEEEC
Confidence 23456678 66888765543
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.14 Score=45.16 Aligned_cols=161 Identities=14% Similarity=0.056 Sum_probs=91.5
Q ss_pred EEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccC-CCeEEEEEecCCccEEEE
Q 008274 114 VNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKY-SGGFIWASEKTGFRHLYL 192 (571)
Q Consensus 114 ~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~-~d~~~~~s~~~g~~~l~~ 192 (571)
++.-+-++.|. +++...+ .|.++++++...+.+....... |.. ...+ ..+++|.++......|++
T Consensus 82 lAvD~~~~~lY-~~d~~~~--~I~v~~~~g~~~~~~~~~~~~~---------P~~--l~vd~~~g~ly~~~~~~~~~I~r 147 (266)
T d1ijqa1 82 LAVDWIHSNIY-WTDSVLG--TVSVADTKGVKRKTLFRENGSK---------PRA--IVVDPVHGFMYWTDWGTPAKIKK 147 (266)
T ss_dssp EEEETTTTEEE-EEETTTT--EEEEEETTSSSEEEEEECTTCC---------EEE--EEEETTTTEEEEEECSSSCEEEE
T ss_pred EEEeeccceEE-EEecCCC--EEEeEecCCceEEEEEcCCCCC---------cce--EEEEcccCeEEEeccCCCcceeE
Confidence 44444444433 3444432 5999999988877665432110 100 0112 346777777655568999
Q ss_pred EeCCCceeeceeecCe-EEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEe-cCCCc-eEEEEECC
Q 008274 193 HDINGTCLGPITEGDW-MVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKL-TNGKG-KHVAVLDH 269 (571)
Q Consensus 193 ~~~~~~~~~~lT~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~l-t~~~g-~~~~~~s~ 269 (571)
.+.+|...+.|..... ....+ .+++.++.||++-... ..|.++++ +|. ..+.+ ....+ .+-..++.
T Consensus 148 ~~~dGs~~~~l~~~~~~~p~gl-~iD~~~~~lYw~d~~~----~~I~~~~~--dG~----~~~~~~~~~~~~~~p~~lav 216 (266)
T d1ijqa1 148 GGLNGVDIYSLVTENIQWPNGI-TLDLLSGRLYWVDSKL----HSISSIDV--NGG----NRKTILEDEKRLAHPFSLAV 216 (266)
T ss_dssp EETTSCCEEEEECSSCSCEEEE-EEETTTTEEEEEETTT----TEEEEEET--TSC----SCEEEEECTTTTSSEEEEEE
T ss_pred eccCCCceecccccccceeeEE-EeeccccEEEEecCCc----CEEEEEEC--CCC----CEEEEEeCCCcccccEEEEE
Confidence 9999988777754432 23344 4888899999985433 47889998 664 22333 22211 11223334
Q ss_pred CCCEEEEEeeCCCCCCEEEEEEcCCCceeEecc
Q 008274 270 NMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLY 302 (571)
Q Consensus 270 ~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~ 302 (571)
++.++.++-. ....|++++..+++..+.+.
T Consensus 217 ~~~~ly~td~---~~~~I~~~~~~~g~~~~~~~ 246 (266)
T d1ijqa1 217 FEDKVFWTDI---INEAIFSANRLTGSDVNLLA 246 (266)
T ss_dssp ETTEEEEEET---TTTEEEEEETTTCCCCEEEE
T ss_pred ECCEEEEEEC---CCCeEEEEECCCCcceEEEE
Confidence 4556655432 23588888876766544443
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.72 E-value=0.011 Score=54.02 Aligned_cols=58 Identities=7% Similarity=-0.058 Sum_probs=38.2
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 149 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l 149 (571)
+.++|+...+....... ......+..+.|+|||+.++...... .|++.|+.+++....
T Consensus 250 i~~~~~~~~~~~~~~~~------~~~~~~i~~~~~s~~~~~l~~g~~dg----~i~iwd~~~~~~~~~ 307 (340)
T d1tbga_ 250 CRLFDLRADQELMTYSH------DNIICGITSVSFSKSGRLLLAGYDDF----NCNVWDALKADRAGV 307 (340)
T ss_dssp EEEEETTTTEEEEEECC------TTCCSCEEEEEECSSSCEEEEEETTS----CEEEEETTTCCEEEE
T ss_pred EEEEeeccccccccccc------ccccCceEEEEECCCCCEEEEEECCC----EEEEEECCCCcEEEE
Confidence 57788887655432211 22345677899999999777654433 388889999876543
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=96.72 E-value=0.18 Score=46.86 Aligned_cols=188 Identities=7% Similarity=-0.061 Sum_probs=87.7
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
..+.+|.++++...+.... .+.......++++||++.+... +. .....|.+|.+++...........
T Consensus 17 ~~~~fd~~~~~l~~~~~~~-----~~~~~~~s~la~s~d~~~ly~~-~~--~~~~~~~i~~~~~~~~~~~~~~~~----- 83 (365)
T d1jofa_ 17 FTVQFDDEKLTCKLIKRTE-----IPQDEPISWMTFDHERKNIYGA-AM--KKWSSFAVKSPTEIVHEASHPIGG----- 83 (365)
T ss_dssp EEEEEETTTTEEEEEEEEE-----CCTTCCCSEEEECTTSSEEEEE-EB--TEEEEEEEEETTEEEEEEEEECCS-----
T ss_pred EEEEEcCCCCeEEEeeeee-----ccCCCCCCEEEEcCCCCEEEEE-eC--CcEEEEEEeCCCCeEEEeeecCCC-----
Confidence 3455666677665432210 1223334458899999866554 33 345678888876654433322111
Q ss_pred cCCcccCCCCCccCCCe--EEEEEecCCccEEEEEeC--CCceeec------------ee----ecCeEEEEEEEEeecC
Q 008274 161 HDCFTPLDKGVTKYSGG--FIWASEKTGFRHLYLHDI--NGTCLGP------------IT----EGDWMVEQIVGVNEAS 220 (571)
Q Consensus 161 ~~~~~~~~~~~~~~~d~--~~~~s~~~g~~~l~~~~~--~~~~~~~------------lT----~~~~~~~~~~~~s~dg 220 (571)
. |+.. ..++++ +++.+...+-..++.+.. .++.... .. ...-.++.+ .++|||
T Consensus 84 ~----p~~v--~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v-~~sPdG 156 (365)
T d1jofa_ 84 H----PRAN--DADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGM-VFDPTE 156 (365)
T ss_dssp S----GGGG--CTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEE-EECTTS
T ss_pred C----cEEE--EECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEE-EECCCC
Confidence 1 1111 112332 333333323233333221 1111111 10 011123455 499999
Q ss_pred cEEEEEEcCCCCceeEEEEEEeCCCCCCCCCC-CeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCC
Q 008274 221 GQVYFTGTLDGPLESHLYCAKLYPDWNHTLEA-PVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDG 295 (571)
Q Consensus 221 ~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~-~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~ 295 (571)
+++|......+ ...+|+++. .+...... ......+.+-....++|+|+++..+.... ..+.+++...+
T Consensus 157 ~~l~v~d~g~d--~v~~~~~~~--~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~---~~V~v~~~~~~ 225 (365)
T d1jofa_ 157 TYLYSADLTAN--KLWTHRKLA--SGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG---NRICEYVIDPA 225 (365)
T ss_dssp SEEEEEETTTT--EEEEEEECT--TSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT---TEEEEEEECTT
T ss_pred CEEEEeeCCCC--EEEEEEccC--CCceeeccceeecCCCCceEEEEECCCCceEEEeccCC---CEEEEEEecCC
Confidence 99988754333 244444332 33211000 01112234555679999999765544332 36777776443
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.66 E-value=0.0029 Score=61.81 Aligned_cols=141 Identities=13% Similarity=0.056 Sum_probs=80.5
Q ss_pred EEEcCCCcEEEEEEEcCCCCCCCCCCceEEEEEcCCCCceeeccccccc-----------chhhhHHHHhCCcEEEEECC
Q 008274 323 QIQANDGTVLYGALYKPDESRYGPPPYKTLISVYGGPCVQLVCDSWINT-----------VDMRAQYLRSKGILVWKLDN 391 (571)
Q Consensus 323 ~~~~~dg~~l~~~~~~P~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~-----------~~~~~~~l~~~G~~v~~~d~ 391 (571)
.++..++..+..|.+.... .++..|+++++-|||+.+.....|... .......+.+ =..++.+|.
T Consensus 25 yl~~~~~~~lffw~~~s~~---~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~-~anllfIDq 100 (452)
T d1ivya_ 25 YLKSSGSKHLHYWFVESQK---DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNL-IANVLYLES 100 (452)
T ss_dssp EEECSTTEEEEEEEECCSS---CGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGG-SSEEEEECC
T ss_pred eeecCCCceEEEEEEEcCC---CCCCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhc-ccCEEEEec
Confidence 3455667788888776543 225679999999999986533221100 0000011111 256888897
Q ss_pred C-CCCCChhhhHHHHhccCCCCCchhHHHHHH-HHHHcCCCcCCcEEEEeechHHHHHHHHHhc---C-CCeeEEEEEcC
Q 008274 392 R-GTARRGLKFEASIKHNCGRIDAEDQLTGAE-WLIKQGLAKVGHIGLYGWSYGGYLSAITLAR---F-PDVFQCAVSGA 465 (571)
Q Consensus 392 r-G~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~---~-~~~~~~~v~~~ 465 (571)
| |.|-|-..-.. ...+ -.....|+.++++ ++...+.....++.|+|.||||..+-.++.. . .-.+++++..+
T Consensus 101 PvGtGfS~~~~~~-~~~~-~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~ign 178 (452)
T d1ivya_ 101 PAGVGFSYSDDKF-YATN-DTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGN 178 (452)
T ss_dssp STTSTTCEESSCC-CCCB-HHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEES
T ss_pred CCCcccccCCCCC-CCCC-cHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCC
Confidence 5 77655211000 0000 0001345545554 4444454556789999999999988776643 2 23478999999
Q ss_pred ccCC
Q 008274 466 PVTS 469 (571)
Q Consensus 466 ~~~~ 469 (571)
|+.+
T Consensus 179 g~~d 182 (452)
T d1ivya_ 179 GLSS 182 (452)
T ss_dssp CCSB
T ss_pred CccC
Confidence 9876
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.65 E-value=0.1 Score=47.56 Aligned_cols=144 Identities=9% Similarity=-0.040 Sum_probs=73.3
Q ss_pred EEEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCC--CceEEEEEeecCCe
Q 008274 80 VRLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKT--GQRKVILVEELDSW 157 (571)
Q Consensus 80 ~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~--g~~~~l~~~~~~~w 157 (571)
..++.++.+++..+.+.. .-..-..++|+|||+.+++..... + .|+++|++. ...........
T Consensus 157 g~v~~~~~dg~~~~~~~~---------~~~~pnGia~s~dg~~lyvad~~~-~--~I~~~d~~~~g~~~~~~~~~~~--- 221 (319)
T d2dg1a1 157 GGVYYVSPDFRTVTPIIQ---------NISVANGIALSTDEKVLWVTETTA-N--RLHRIALEDDGVTIQPFGATIP--- 221 (319)
T ss_dssp EEEEEECTTSCCEEEEEE---------EESSEEEEEECTTSSEEEEEEGGG-T--EEEEEEECTTSSSEEEEEEEEE---
T ss_pred ceeEEEecccceeEEEee---------ccceeeeeeeccccceEEEecccC-C--ceEEEEEcCCCceeccccceee---
Confidence 446666666655544421 112334589999998766654333 2 477777653 22222211100
Q ss_pred eeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeec-----Ce-EEEEEEEEeecCcEEEEEEcC-C
Q 008274 158 VNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEG-----DW-MVEQIVGVNEASGQVYFTGTL-D 230 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~-----~~-~~~~~~~~s~dg~~l~~~~~~-~ 230 (571)
........|. +...+.++-+|+++. +-..|.+++.+|.....+.-. .. .+..+ .+.++++.+|.++.. +
T Consensus 222 ~~~~~~~~Pd--Gl~vD~~G~l~Va~~-~~g~V~~~~p~G~~l~~i~~P~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~ 297 (319)
T d2dg1a1 222 YYFTGHEGPD--SCCIDSDDNLYVAMY-GQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHP-QFIPGTNQLIICSNDIE 297 (319)
T ss_dssp EECCSSSEEE--EEEEBTTCCEEEEEE-TTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEE-EECTTSCEEEEEEECGG
T ss_pred eccCCcccee--eeeEcCCCCEEEEEc-CCCEEEEECCCCcEEEEEeCCCcCCCcCceeeeE-EEeCCCCEEEEEcCCCC
Confidence 0000000111 112344554455544 335788999877655555321 11 12233 377777777777653 3
Q ss_pred CCceeEEEEEEe
Q 008274 231 GPLESHLYCAKL 242 (571)
Q Consensus 231 ~~~~~~l~~~~l 242 (571)
.+..-.||+++.
T Consensus 298 ~~~~g~l~~~~~ 309 (319)
T d2dg1a1 298 MGGGSMLYTVNG 309 (319)
T ss_dssp GTCCEEEEEEEC
T ss_pred cCCceeEEEEeC
Confidence 334578999987
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=96.43 E-value=0.07 Score=49.01 Aligned_cols=169 Identities=14% Similarity=0.101 Sum_probs=90.2
Q ss_pred CceEEECCC--CCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEEeccCCCC
Q 008274 25 KTGYWWSLD--SKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWMDLQCGGT 102 (571)
Q Consensus 25 ~~~~~wSPD--g~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~~~~~~~~ 102 (571)
+.++|.+|. ++.|++.+.... .|++|||++.+...+...
T Consensus 28 DPAIW~n~~~p~~SlI~gTdK~~-----------------------------------Gl~vYdL~G~~l~~~~~G---- 68 (353)
T d1h6la_ 28 DPAIWLDPKNPQNSKLITTNKKS-----------------------------------GLAVYSLEGKMLHSYHTG---- 68 (353)
T ss_dssp EEEEECCSSCGGGCEEEEEETTS-----------------------------------CCEEEETTCCEEEECCSS----
T ss_pred CceEEcCCCCcCccEEEEEcCcC-----------------------------------CEEEEcCCCcEEEecccC----
Confidence 467888886 677888764322 369999987766655332
Q ss_pred CCCCCCce-eEEEEEccCCe--EEEEEEeccC--ccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe
Q 008274 103 DQNYDEEY-LARVNWMHGNI--LTAQVLNRSQ--TKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG 177 (571)
Q Consensus 103 ~~~~~~~~-~~~~~wspDg~--~i~~~~~r~~--~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~ 177 (571)
+-.. ...-.+.-+++ .+++.++|.. ...++|.+|...+..+.+.......-......+..|.......+.-
T Consensus 69 ----r~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~ 144 (353)
T d1h6la_ 69 ----KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKY 144 (353)
T ss_dssp ----CEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCE
T ss_pred ----CcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccccccccccccccccccCcceEEEEEecCCCCeE
Confidence 1111 11112333444 5788899974 3557888888877655443211110000000111111000001222
Q ss_pred EEEEEecCCccEEEEEeCCC-ce-----eeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeC
Q 008274 178 FIWASEKTGFRHLYLHDING-TC-----LGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLY 243 (571)
Q Consensus 178 ~~~~s~~~g~~~l~~~~~~~-~~-----~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~ 243 (571)
++|+++++|.-..|.+...+ +. .+.+..+. +++.++ ++...+.||+.-.. ..+|++++.
T Consensus 145 ~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~-q~EGCV-vDde~~~LyisEE~-----~Giw~~~a~ 209 (353)
T d1h6la_ 145 YAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNS-QTEGMA-ADDEYGSLYIAEED-----EAIWKFSAE 209 (353)
T ss_dssp EEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSS-CEEEEE-EETTTTEEEEEETT-----TEEEEEESS
T ss_pred EEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCC-ccceEE-EeCCCCcEEEecCc-----cceEEEEec
Confidence 67788888876667665332 22 22232222 566776 88888888888432 346777763
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.40 E-value=0.11 Score=46.06 Aligned_cols=140 Identities=13% Similarity=0.123 Sum_probs=67.3
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
+.+|++.+.+... ... ......+..++|+|||++++...... .|..+|+.+++............+..
T Consensus 143 v~~~~~~~~~~~~-~~~------~~~~~~v~~~~~s~~~~~l~~g~~dg----~i~i~d~~~~~~~~~~~~~h~~~v~~- 210 (287)
T d1pgua2 143 IQVFKLSDLEVSF-DLK------TPLRAKPSYISISPSETYIAAGDVMG----KILLYDLQSREVKTSRWAFRTSKINA- 210 (287)
T ss_dssp EEEEETTEEEEEE-ECS------SCCSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTTEEEECCSCCCSSCEEE-
T ss_pred eeeeeccccceee-eee------eccCCceeEEEeccCccccccccccc----cccceeecccccccccccccccccce-
Confidence 5667776543322 221 22345678899999999877665443 28888998876432110000111100
Q ss_pred CCcccCCCCC-ccCCCe-EEEEEecCCccEEEEEeCCC-c-eeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 162 DCFTPLDKGV-TKYSGG-FIWASEKTGFRHLYLHDING-T-CLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 162 ~~~~~~~~~~-~~~~d~-~~~~s~~~g~~~l~~~~~~~-~-~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
-.|.|..... ....+. ++.....+| .|+++++.. . ..+.+......+..+. |++++ .| +++..++. ..+
T Consensus 211 ~~~~p~~~~~~~~~~~~~~l~sgs~D~--~i~iw~~~~~~~~~~~~~~h~~~V~~v~-~~~~~-~l-~s~g~D~~--v~i 283 (287)
T d1pgua2 211 ISWKPAEKGANEEEIEEDLVATGSLDT--NIFIYSVKRPMKIIKALNAHKDGVNNLL-WETPS-TL-VSSGADAC--IKR 283 (287)
T ss_dssp EEECCCC------CCSCCEEEEEETTS--CEEEEESSCTTCCEEETTSSTTCEEEEE-EEETT-EE-EEEETTSC--EEE
T ss_pred eeecccccccccccCCCCeeEeecCCC--eEEEEECCCCCeEEEEeCCCCCCeEEEE-ECCCC-EE-EEEECCCe--EEE
Confidence 0122211100 112233 554444555 466666543 2 2333333344566664 88876 34 44444543 666
Q ss_pred EEE
Q 008274 238 YCA 240 (571)
Q Consensus 238 ~~~ 240 (571)
|.+
T Consensus 284 W~i 286 (287)
T d1pgua2 284 WNV 286 (287)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.26 E-value=0.33 Score=42.53 Aligned_cols=164 Identities=10% Similarity=0.125 Sum_probs=92.1
Q ss_pred eEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEE
Q 008274 111 LARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHL 190 (571)
Q Consensus 111 ~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l 190 (571)
...+.+-+-++.| ||++..++ .|++++++++..+.+....-. . |......|..+.++|. +. +...|
T Consensus 38 ~~~ld~D~~~~~i-ywsd~~~~--~I~~~~l~g~~~~~v~~~~~~--~-------p~~iAvD~~~~~lY~~-d~-~~~~I 103 (263)
T d1npea_ 38 IIGLAFDCVDKVV-YWTDISEP--SIGRASLHGGEPTTIIRQDLG--S-------PEGIALDHLGRTIFWT-DS-QLDRI 103 (263)
T ss_dssp EEEEEEETTTTEE-EEEETTTT--EEEEEESSSCCCEEEECTTCC--C-------EEEEEEETTTTEEEEE-ET-TTTEE
T ss_pred EEEEEEEeCCCEE-EEEECCCC--eEEEEEcccCCcEEEEEeccc--c-------ccEEEEeccCCeEEEe-cc-CCCEE
Confidence 3345555554444 45444332 599999998877766432100 0 0000012334456654 33 34578
Q ss_pred EEEeCCCceeeceeecC-eEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecCCC--ceEEEEE
Q 008274 191 YLHDINGTCLGPITEGD-WMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTNGK--GKHVAVL 267 (571)
Q Consensus 191 ~~~~~~~~~~~~lT~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~~~--g~~~~~~ 267 (571)
.++++++...+.|.... .....+. ++|.++.||++....+ ...|+++++ +|. ..+.+.... .-...++
T Consensus 104 ~~~~~dg~~~~~l~~~~l~~p~~l~-vdp~~g~ly~t~~~~~--~~~I~r~~~--dG~----~~~~i~~~~~~~P~glai 174 (263)
T d1npea_ 104 EVAKMDGTQRRVLFDTGLVNPRGIV-TDPVRGNLYWTDWNRD--NPKIETSHM--DGT----NRRILAQDNLGLPNGLTF 174 (263)
T ss_dssp EEEETTSCSCEEEECSSCSSEEEEE-EETTTTEEEEEECCSS--SCEEEEEET--TSC----CCEEEECTTCSCEEEEEE
T ss_pred EEEecCCceEEEEecccccCCcEEE-EecccCcEEEeecCCC--CcEEEEecC--CCC----CceeeeeecccccceEEE
Confidence 89998887665554332 2334454 8999999999875432 256999999 665 334443322 2234577
Q ss_pred CCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 268 DHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 268 s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.+.++.+.+.-.. -..|..+++ +|...+.+
T Consensus 175 D~~~~~lYw~d~~---~~~I~~~~~-~g~~~~~v 204 (263)
T d1npea_ 175 DAFSSQLCWVDAG---THRAECLNP-AQPGRRKV 204 (263)
T ss_dssp ETTTTEEEEEETT---TTEEEEEET-TEEEEEEE
T ss_pred eecCcEEEEEeCC---CCEEEEEEC-CCCCeEEE
Confidence 7777766554322 247888887 45444444
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.25 E-value=0.18 Score=45.16 Aligned_cols=148 Identities=11% Similarity=0.022 Sum_probs=84.7
Q ss_pred EEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCC-eEEEEEecCCccEE
Q 008274 112 ARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSG-GFIWASEKTGFRHL 190 (571)
Q Consensus 112 ~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d-~~~~~s~~~g~~~l 190 (571)
..|.|.++...|+++.-.. ..|+++|+++|+.+..........+ ...++ ++++.+ +. .|
T Consensus 21 Egp~wd~~~~~l~wvDi~~---~~I~r~d~~~g~~~~~~~~~~~~~i-------------~~~~dg~l~va~-~~---gl 80 (295)
T d2ghsa1 21 EGPTFDPASGTAWWFNILE---RELHELHLASGRKTVHALPFMGSAL-------------AKISDSKQLIAS-DD---GL 80 (295)
T ss_dssp EEEEEETTTTEEEEEEGGG---TEEEEEETTTTEEEEEECSSCEEEE-------------EEEETTEEEEEE-TT---EE
T ss_pred eCCeEECCCCEEEEEECCC---CEEEEEECCCCeEEEEECCCCcEEE-------------EEecCCCEEEEE-eC---cc
Confidence 5689998655555553222 2599999999986643221111100 11233 355543 33 48
Q ss_pred EEEeCCCceeeceeec-----CeEEEEEEEEeecCcEEEEEEcCC--CCceeEEEEEEeCCCCCCCCCCCeEecCC-Cce
Q 008274 191 YLHDINGTCLGPITEG-----DWMVEQIVGVNEASGQVYFTGTLD--GPLESHLYCAKLYPDWNHTLEAPVKLTNG-KGK 262 (571)
Q Consensus 191 ~~~~~~~~~~~~lT~~-----~~~~~~~~~~s~dg~~l~~~~~~~--~~~~~~l~~~~l~~~g~~~~~~~~~lt~~-~g~ 262 (571)
++++.++++.+.+... .....+. .++++|+ ++|..... ......+|+.. ++ ..+++... ...
T Consensus 81 ~~~d~~tg~~~~l~~~~~~~~~~~~nd~-~vd~~G~-iw~~~~~~~~~~~~g~l~~~~---~g-----~~~~~~~~~~~~ 150 (295)
T d2ghsa1 81 FLRDTATGVLTLHAELESDLPGNRSNDG-RMHPSGA-LWIGTMGRKAETGAGSIYHVA---KG-----KVTKLFADISIP 150 (295)
T ss_dssp EEEETTTCCEEEEECSSTTCTTEEEEEE-EECTTSC-EEEEEEETTCCTTCEEEEEEE---TT-----EEEEEEEEESSE
T ss_pred EEeecccceeeEEeeeecCCCcccceee-EECCCCC-EEEEeccccccccceeEeeec---CC-----cEEEEeeccCCc
Confidence 9999998887777542 1233444 3888887 55555422 12246777765 33 22333221 223
Q ss_pred EEEEECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 263 HVAVLDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 263 ~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
....+|++++.+.++-+. ...|+.+++
T Consensus 151 Ng~~~s~d~~~l~~~dt~---~~~I~~~~~ 177 (295)
T d2ghsa1 151 NSICFSPDGTTGYFVDTK---VNRLMRVPL 177 (295)
T ss_dssp EEEEECTTSCEEEEEETT---TCEEEEEEB
T ss_pred ceeeecCCCceEEEeecc---cceeeEeee
Confidence 456899999987775533 347888876
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.16 E-value=0.024 Score=53.58 Aligned_cols=90 Identities=11% Similarity=0.050 Sum_probs=56.6
Q ss_pred CceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCceEEE-eccCCCC-
Q 008274 25 KTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPVSWM-DLQCGGT- 102 (571)
Q Consensus 25 ~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~~~~-~~~~~~~- 102 (571)
...+.|||||+.|+-.+.+.+. ..+.+||+++++.... .......
T Consensus 234 V~~l~~spdg~~l~sgs~D~t~---------------------------------~~i~lwd~~~g~~~~~l~~~~~~~~ 280 (393)
T d1sq9a_ 234 IRSVKFSPQGSLLAIAHDSNSF---------------------------------GCITLYETEFGERIGSLSVPTHSSQ 280 (393)
T ss_dssp EEEEEECSSTTEEEEEEEETTE---------------------------------EEEEEEETTTCCEEEEECBC-----
T ss_pred EEEcccccccceeeeecCCCCc---------------------------------ceeeecccccceeeeeecccccccc
Confidence 3568899999998776555332 1357788888765432 1110000
Q ss_pred ---CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEE
Q 008274 103 ---DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 103 ---~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~ 151 (571)
.+.+....+..++|+|||++|+...... .|.+-|+++|++....+
T Consensus 281 ~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~----~v~vWd~~~g~~~~~l~ 328 (393)
T d1sq9a_ 281 ASLGEFAHSSWVMSLSFNDSGETLCSAGWDG----KLRFWDVKTKERITTLN 328 (393)
T ss_dssp ---CCBSBSSCEEEEEECSSSSEEEEEETTS----EEEEEETTTTEEEEEEE
T ss_pred ceeeeecccCceeeeccCCCCCeeEEECCCC----EEEEEECCCCCEEEEEC
Confidence 1123345688899999999877654333 38888999998654433
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=96.13 E-value=0.51 Score=43.54 Aligned_cols=73 Identities=11% Similarity=-0.025 Sum_probs=36.1
Q ss_pred EEeecCcEEEEEEcC-CCCceeEEEEEEeCCCCCCCCCCCeEe----cCCCceEEEEECC-CCCEEEEEeeCCCCCCEEE
Q 008274 215 GVNEASGQVYFTGTL-DGPLESHLYCAKLYPDWNHTLEAPVKL----TNGKGKHVAVLDH-NMRNFVDFHDSLDSPPRIL 288 (571)
Q Consensus 215 ~~s~dg~~l~~~~~~-~~~~~~~l~~~~l~~~g~~~~~~~~~l----t~~~g~~~~~~s~-~g~~~v~~~s~~~~p~~l~ 288 (571)
.++|||++||.+... +......+....+...+.. .....+ +.+..-..+.++| +|++++..-.. -..+.
T Consensus 261 ~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~--~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~---s~~v~ 335 (365)
T d1jofa_ 261 ALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI--EKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ---EGWLE 335 (365)
T ss_dssp EECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE--EEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS---SCEEE
T ss_pred EECCCCCEEEEEcccCCCccceEEEEEEecCCCce--eeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCC---CCeEE
Confidence 489999999887542 2222234444444223320 011111 1222233457887 78876554333 23566
Q ss_pred EEEc
Q 008274 289 LCSL 292 (571)
Q Consensus 289 ~~~~ 292 (571)
+++.
T Consensus 336 v~~~ 339 (365)
T d1jofa_ 336 IYRW 339 (365)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.03 E-value=0.11 Score=48.71 Aligned_cols=64 Identities=9% Similarity=0.063 Sum_probs=41.1
Q ss_pred EEEEEECCCCceEE-EeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE
Q 008274 81 RLGVVSAAGGPVSW-MDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV 148 (571)
Q Consensus 81 ~l~~~dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~ 148 (571)
.|.+||+.+++... +... ..+......+..++|||||++++...... ....|.+.|+++|+...
T Consensus 206 ~i~iwd~~~~~~~~~~~~~---~~l~~h~~~V~~l~~spdg~~l~sgs~D~-t~~~i~lwd~~~g~~~~ 270 (393)
T d1sq9a_ 206 TVQISELSTLRPLYNFESQ---HSMINNSNSIRSVKFSPQGSLLAIAHDSN-SFGCITLYETEFGERIG 270 (393)
T ss_dssp EEEEEETTTTEEEEEEECC---C---CCCCCEEEEEECSSTTEEEEEEEET-TEEEEEEEETTTCCEEE
T ss_pred cEEEEeecccccccccccc---cccccccceEEEcccccccceeeeecCCC-Ccceeeecccccceeee
Confidence 46888999876532 2111 11223455788899999999877765433 34457788999998654
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.99 E-value=0.45 Score=41.63 Aligned_cols=183 Identities=12% Similarity=0.063 Sum_probs=96.0
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeec
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNL 160 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~ 160 (571)
.|+..+++++..+.+-.. .-.....++...-+..|.+ .+... ..|.++++++..++.|.......
T Consensus 59 ~I~~~~l~g~~~~~v~~~--------~~~~p~~iAvD~~~~~lY~-~d~~~--~~I~~~~~dg~~~~~l~~~~l~~---- 123 (263)
T d1npea_ 59 SIGRASLHGGEPTTIIRQ--------DLGSPEGIALDHLGRTIFW-TDSQL--DRIEVAKMDGTQRRVLFDTGLVN---- 123 (263)
T ss_dssp EEEEEESSSCCCEEEECT--------TCCCEEEEEEETTTTEEEE-EETTT--TEEEEEETTSCSCEEEECSSCSS----
T ss_pred eEEEEEcccCCcEEEEEe--------ccccccEEEEeccCCeEEE-eccCC--CEEEEEecCCceEEEEecccccC----
Confidence 467778877655544221 1122333444333333433 34332 25999999988877664421110
Q ss_pred cCCcccCCCCCccC-CCeEEEEEecC-CccEEEEEeCCCceeeceeecCeE-EEEEEEEeecCcEEEEEEcCCCCceeEE
Q 008274 161 HDCFTPLDKGVTKY-SGGFIWASEKT-GFRHLYLHDINGTCLGPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHL 237 (571)
Q Consensus 161 ~~~~~~~~~~~~~~-~d~~~~~s~~~-g~~~l~~~~~~~~~~~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l 237 (571)
|. ....+ ..+++|.++.. +...|++.+++|...+.+...... ...+ .+++.++.||++-... ..|
T Consensus 124 -----p~--~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~gl-aiD~~~~~lYw~d~~~----~~I 191 (263)
T d1npea_ 124 -----PR--GIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGL-TFDAFSSQLCWVDAGT----HRA 191 (263)
T ss_dssp -----EE--EEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEE-EEETTTTEEEEEETTT----TEE
T ss_pred -----Cc--EEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceE-EEeecCcEEEEEeCCC----CEE
Confidence 00 00112 23566666553 345699999998877666554322 2333 4888899999985433 467
Q ss_pred EEEEeCCCCCCCCCCCeEe-cCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 238 YCAKLYPDWNHTLEAPVKL-TNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 238 ~~~~l~~~g~~~~~~~~~l-t~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
.++++ +|. ..+.+ .....-...++ ++.++.++-.. ...|++++..+++....+
T Consensus 192 ~~~~~--~g~----~~~~v~~~~~~P~~lav--~~~~lYwtd~~---~~~I~~~~~~~g~~~~~~ 245 (263)
T d1npea_ 192 ECLNP--AQP----GRRKVLEGLQYPFAVTS--YGKNLYYTDWK---TNSVIAMDLAISKEMDTF 245 (263)
T ss_dssp EEEET--TEE----EEEEEEECCCSEEEEEE--ETTEEEEEETT---TTEEEEEETTTTEEEEEE
T ss_pred EEEEC--CCC----CeEEEECCCCCcEEEEE--ECCEEEEEECC---CCEEEEEECCCCccceEE
Confidence 88888 553 22222 22111122233 34455443222 236777777666654444
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.87 E-value=0.51 Score=41.33 Aligned_cols=183 Identities=11% Similarity=0.049 Sum_probs=101.9
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCc----eEEEEEeecCCe
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQ----RKVILVEELDSW 157 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~----~~~l~~~~~~~w 157 (571)
|+.+++++.+...+.. .......+.|.+.++.+. |++... ..|+++++++.. .+.+... ..+
T Consensus 12 I~~~~l~~~~~~~~~~---------~~~~~~~id~d~~~~~lY-w~D~~~--~~I~~~~l~~~~~~~~~~~~~~~--~~~ 77 (266)
T d1ijqa1 12 VRKMTLDRSEYTSLIP---------NLRNVVALDTEVASNRIY-WSDLSQ--RMICSTQLDRAHGVSSYDTVISR--DIQ 77 (266)
T ss_dssp EEEEETTSCCCEEEEC---------SCSSEEEEEEETTTTEEE-EEETTT--TEEEEEEC--------CEEEECS--SCS
T ss_pred EEEEECCCCcceeeeC---------CCCceEEEEEEeCCCEEE-EEECCC--CEEEEEEecCCCCCcceEEEEeC--CCC
Confidence 5678888877665522 233445678888776654 444332 258888887532 1222111 100
Q ss_pred eeccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCceeeceeecC-eEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 158 VNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCLGPITEGD-WMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
.+......|..+.++|. +. +...|++++++|...+.+.... .....+. ++|..+.||++..... ..
T Consensus 78 -------~p~glAvD~~~~~lY~~-d~-~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~-vd~~~g~ly~~~~~~~---~~ 144 (266)
T d1ijqa1 78 -------APDGLAVDWIHSNIYWT-DS-VLGTVSVADTKGVKRKTLFRENGSKPRAIV-VDPVHGFMYWTDWGTP---AK 144 (266)
T ss_dssp -------CCCEEEEETTTTEEEEE-ET-TTTEEEEEETTSSSEEEEEECTTCCEEEEE-EETTTTEEEEEECSSS---CE
T ss_pred -------CcceEEEeeccceEEEE-ec-CCCEEEeEecCCceEEEEEcCCCCCcceEE-EEcccCeEEEeccCCC---cc
Confidence 01000112344556664 43 3457999999888765554432 2344443 8888899999864332 57
Q ss_pred EEEEEeCCCCCCCCCCCeEecCC--CceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEec
Q 008274 237 LYCAKLYPDWNHTLEAPVKLTNG--KGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPL 301 (571)
Q Consensus 237 l~~~~l~~~g~~~~~~~~~lt~~--~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l 301 (571)
|+++++ +|+ ..+.+... ..-...++.+.++.+.+.=.. ...|..+++ +|...+.+
T Consensus 145 I~r~~~--dGs----~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~---~~~I~~~~~-dG~~~~~~ 201 (266)
T d1ijqa1 145 IKKGGL--NGV----DIYSLVTENIQWPNGITLDLLSGRLYWVDSK---LHSISSIDV-NGGNRKTI 201 (266)
T ss_dssp EEEEET--TSC----CEEEEECSSCSCEEEEEEETTTTEEEEEETT---TTEEEEEET-TSCSCEEE
T ss_pred eeEecc--CCC----ceecccccccceeeEEEeeccccEEEEecCC---cCEEEEEEC-CCCCEEEE
Confidence 999999 675 44454432 223455788877777665322 248888888 45433333
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=95.28 E-value=0.43 Score=43.03 Aligned_cols=67 Identities=7% Similarity=0.008 Sum_probs=42.0
Q ss_pred CCCeEEEEEecCCccEEEEEeCCCceee-ceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCC
Q 008274 174 YSGGFIWASEKTGFRHLYLHDINGTCLG-PITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDW 246 (571)
Q Consensus 174 ~~d~~~~~s~~~g~~~l~~~~~~~~~~~-~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g 246 (571)
+.++-+|+++. +...|+++++++++.. .+.........+ .|.+|++.||++....+ .||++++...|
T Consensus 234 D~~GnlyVa~~-~~g~I~~~dp~~g~~~~~i~~p~~~~t~~-afg~d~~~lyVt~~~~g----~i~~~~~~~~G 301 (314)
T d1pjxa_ 234 DEDNNLLVANW-GSSHIEVFGPDGGQPKMRIRCPFEKPSNL-HFKPQTKTIFVTEHENN----AVWKFEWQRNG 301 (314)
T ss_dssp BTTCCEEEEEE-TTTEEEEECTTCBSCSEEEECSSSCEEEE-EECTTSSEEEEEETTTT----EEEEEECSSCB
T ss_pred ecCCcEEEEEc-CCCEEEEEeCCCCEEEEEEECCCCCEEEE-EEeCCCCEEEEEECCCC----cEEEEECCCCC
Confidence 44554455543 3457999998877643 343332233444 48999999999876554 78888874333
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=95.16 E-value=0.22 Score=47.19 Aligned_cols=58 Identities=5% Similarity=-0.117 Sum_probs=35.8
Q ss_pred EEEEEECCCCceEEE-eccCCCCCCCCCCceeEEEEEccCCeE-EEEEEeccC--------------ccEEEEEEECCCC
Q 008274 81 RLGVVSAAGGPVSWM-DLQCGGTDQNYDEEYLARVNWMHGNIL-TAQVLNRSQ--------------TKLKVLKFDIKTG 144 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~wspDg~~-i~~~~~r~~--------------~~~~i~~~d~~~g 144 (571)
+|.++|+++++...+ .+ +.......+.++|||+. +++...... ....+-.+|.++.
T Consensus 95 rVavIDl~t~k~~~ii~i--------P~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~ 166 (441)
T d1qnia2 95 RVARIRLDIMKTDKITHI--------PNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETM 166 (441)
T ss_dssp EEEEEETTTTEEEEEEEC--------TTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTC
T ss_pred EEEEEECCCCcEeeEEec--------CCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccc
Confidence 578899999887654 23 22345556899999994 344332221 1234556788887
Q ss_pred ce
Q 008274 145 QR 146 (571)
Q Consensus 145 ~~ 146 (571)
+.
T Consensus 167 ~v 168 (441)
T d1qnia2 167 DV 168 (441)
T ss_dssp SE
T ss_pred ee
Confidence 65
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=95.02 E-value=0.082 Score=50.24 Aligned_cols=35 Identities=9% Similarity=0.026 Sum_probs=24.9
Q ss_pred EEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEE
Q 008274 114 VNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILV 151 (571)
Q Consensus 114 ~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~ 151 (571)
...+|||++++.. +..++ +|.++|++++++..+.+
T Consensus 77 t~gtpDGr~lfV~-d~~~~--rVavIDl~t~k~~~ii~ 111 (441)
T d1qnia2 77 TDGRYDGKYLFIN-DKANT--RVARIRLDIMKTDKITH 111 (441)
T ss_dssp ETTEEEEEEEEEE-ETTTT--EEEEEETTTTEEEEEEE
T ss_pred ecccCCCCEEEEE-cCCCC--EEEEEECCCCcEeeEEe
Confidence 3347999876444 44433 59999999999887765
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.66 E-value=0.69 Score=41.30 Aligned_cols=127 Identities=11% Similarity=0.114 Sum_probs=67.2
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeecc
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLH 161 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~ 161 (571)
+.++|+.+++.... + ......+..+.|++ +.++...... .|...|+.+++.+... +......
T Consensus 225 i~i~d~~~~~~~~~-~-------~~h~~~v~~~~~~~--~~l~~~~~dg----~i~iwd~~~~~~~~~~-~~~~~~~--- 286 (355)
T d1nexb2 225 IRIWDLENGELMYT-L-------QGHTALVGLLRLSD--KFLVSAAADG----SIRGWDANDYSRKFSY-HHTNLSA--- 286 (355)
T ss_dssp EEEEETTTCCEEEE-E-------CCCSSCCCEEEECS--SEEEEECTTS----EEEEEETTTCCEEEEE-ECTTCCC---
T ss_pred EEeeeccccccccc-c-------cccccccccccccc--ceeeeeeccc----ccccccccccceeccc-ccCCceE---
Confidence 67889888765433 2 12344555667764 4555543322 4788899887654322 2211000
Q ss_pred CCcccCCCCCccCCC-eEEEEEecCCccEEEEEeCCCceee--ceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEE
Q 008274 162 DCFTPLDKGVTKYSG-GFIWASEKTGFRHLYLHDINGTCLG--PITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLY 238 (571)
Q Consensus 162 ~~~~~~~~~~~~~~d-~~~~~s~~~g~~~l~~~~~~~~~~~--~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 238 (571)
.. ..+++ .++..+ .+| .|.++++.+++.. .+....-.+..+ .|++ +.++.++..++. ..|+
T Consensus 287 --~~------~~~~~~~~l~~g-~d~--~i~vwd~~tg~~~~~~~~~~~~~V~~v-~~~~--~~~~~~~s~dg~--~~l~ 350 (355)
T d1nexb2 287 --IT------TFYVSDNILVSG-SEN--QFNIYNLRSGKLVHANILKDADQIWSV-NFKG--KTLVAAVEKDGQ--SFLE 350 (355)
T ss_dssp --CC------EEEECSSEEEEE-ETT--EEEEEETTTCCBCCSCTTTTCSEEEEE-EEET--TEEEEEEESSSC--EEEE
T ss_pred --EE------EEcCCCCEEEEE-eCC--EEEEEECCCCCEEEEEecCCCCCEEEE-EEcC--CeEEEEEECCCc--EEEE
Confidence 00 11233 355444 344 5888898776643 233333355555 3765 457777777764 5566
Q ss_pred EEEe
Q 008274 239 CAKL 242 (571)
Q Consensus 239 ~~~l 242 (571)
..+.
T Consensus 351 ~~df 354 (355)
T d1nexb2 351 ILDF 354 (355)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 5553
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=94.23 E-value=0.077 Score=46.89 Aligned_cols=52 Identities=19% Similarity=0.171 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcC---CCeeEEEEEcCccC
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARF---PDVFQCAVSGAPVT 468 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~---~~~~~~~v~~~~~~ 468 (571)
+++...++.+.++. ...+|.+.|||+||.+|..++... ...++...-.+|-.
T Consensus 122 ~~v~~~v~~~~~~~--~~~~i~vtGHSLGGalA~l~a~~l~~~~~~i~~~tFG~Prv 176 (269)
T d1tiba_ 122 DTLRQKVEDAVREH--PDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRV 176 (269)
T ss_dssp HHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCCC
T ss_pred HHHHHHHHHHHHhC--CCcceeeeccchHHHHHHHHHHHHHhccCcceEEEecCCCc
Confidence 45666666666543 345899999999999998887531 22344444455543
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=94.19 E-value=1.9 Score=38.95 Aligned_cols=146 Identities=11% Similarity=0.068 Sum_probs=72.4
Q ss_pred EEEEEEECCCCceE--EEeccCCCCCCCCCCceeEEEE--EccCCeEEEEEEec--cCccEEEEEEECCCCceEEEEEee
Q 008274 80 VRLGVVSAAGGPVS--WMDLQCGGTDQNYDEEYLARVN--WMHGNILTAQVLNR--SQTKLKVLKFDIKTGQRKVILVEE 153 (571)
Q Consensus 80 ~~l~~~dl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--wspDg~~i~~~~~r--~~~~~~i~~~d~~~g~~~~l~~~~ 153 (571)
-.|+++|+++.+.. .+.+..+.. ......-..+. =.+||+..+++.++ .+....|+.++.++.+.+-+..-.
T Consensus 68 G~i~~~dl~~~~~~~~~l~~~~~~~--~~~~f~PhGi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~ 145 (340)
T d1v04a_ 68 GKILLMDLNEKEPAVSELEIIGNTL--DISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 145 (340)
T ss_dssp CEEEEEETTSSSCCEEECEEECSSS--CGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CeEEEEecCCCCCcceEEEecCCCC--CCcceeccceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecC
Confidence 36899999875443 343321110 00011111222 25788855555554 233457888888877654443322
Q ss_pred cCCeeeccCCcccCCCCCccCCCeEEEEEec---------------CCccEEEEEeCCCceeeceeec-CeEEEEEEEEe
Q 008274 154 LDSWVNLHDCFTPLDKGVTKYSGGFIWASEK---------------TGFRHLYLHDINGTCLGPITEG-DWMVEQIVGVN 217 (571)
Q Consensus 154 ~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~---------------~g~~~l~~~~~~~~~~~~lT~~-~~~~~~~~~~s 217 (571)
.+. ...|.+.. ...+++|+++.+. .++..++.++. ++.+.+..+ .+ ...+. +|
T Consensus 146 ~~~------~~~pNDv~-~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~--~~~~~~~~~l~~-pNGI~-~s 214 (340)
T d1v04a_ 146 HKL------LPSVNDIV-AVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDF-ANGIN-IS 214 (340)
T ss_dssp CTT------CSSEEEEE-EEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECS--SCEEEEEEEESS-EEEEE-EC
T ss_pred Ccc------ccCccceE-EecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcC--CceEEEcCCCCc-cceeE-EC
Confidence 210 01111100 1123456665322 12345666653 444444433 33 34454 89
Q ss_pred ecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 218 EASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 218 ~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
+|+++||+..+..+ .|++.++
T Consensus 215 ~d~~~lyVa~t~~~----~i~~y~~ 235 (340)
T d1v04a_ 215 PDGKYVYIAELLAH----KIHVYEK 235 (340)
T ss_dssp TTSSEEEEEEGGGT----EEEEEEE
T ss_pred CCCCEEEEEeCCCC----eEEEEEe
Confidence 99999999988654 3555555
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=94.16 E-value=0.22 Score=43.69 Aligned_cols=54 Identities=15% Similarity=0.142 Sum_probs=35.7
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc----CC----CeeEEEEEcCccCC
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR----FP----DVFQCAVSGAPVTS 469 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~----~~----~~~~~~v~~~~~~~ 469 (571)
..++...++.+.++. ...+|.+.|||+||.+|..++.. .| ..+....-.+|-..
T Consensus 116 ~~~i~~~v~~~~~~~--~~~~i~vtGHSLGGAlA~L~a~~l~~~~~~~~~~~i~~~tFG~PrvG 177 (265)
T d1lgya_ 116 VNDYFPVVQEQLTAH--PTYKVIVTGHSLGGAQALLAGMDLYQREPRLSPKNLSIFTVGGPRVG 177 (265)
T ss_dssp HHHHHHHHHHHHHHC--TTCEEEEEEETHHHHHHHHHHHHHHHHCTTCSTTTEEEEEESCCCCB
T ss_pred HHHHHHHHHHHHhhC--CCceEEEEecccchHHHHHHHHHHHHhCcccCCCcceEEEecCcccc
Confidence 345666666665543 34689999999999999887753 22 23555555666543
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=94.09 E-value=0.45 Score=41.62 Aligned_cols=52 Identities=15% Similarity=0.086 Sum_probs=33.5
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc----C----CCeeEEEEEcCccC
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR----F----PDVFQCAVSGAPVT 468 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~----~----~~~~~~~v~~~~~~ 468 (571)
.++...++.+.++. ...+|.+.|||+||.+|..++.. . ...+.+..-.+|-.
T Consensus 116 ~~i~~~i~~~~~~~--~~~~i~vtGHSLGGAlA~L~a~~l~~~~~~~~~~~i~~~TFG~Prv 175 (265)
T d3tgla_ 116 NELVATVLDQFKQY--PSYKVAVTGHSLGGATVLLCALDLYQREEGLSSSNLFLYTQGQPRV 175 (265)
T ss_dssp HHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHHHHTCSSCCTTTEEEEEESCCCC
T ss_pred HHHHHHHHHHHHhC--CCceEEEecccchHHHHHHHHHHHHHhccccCccccceeecCCCcc
Confidence 44556665555543 34689999999999999887643 1 22345555556643
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=93.31 E-value=0.22 Score=43.77 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=27.9
Q ss_pred chhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc
Q 008274 414 AEDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR 453 (571)
Q Consensus 414 ~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~ 453 (571)
..++...++.+.++. ...+|.+.|||+||.+|..++..
T Consensus 120 ~~~i~~~i~~~~~~~--~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 120 RDDIIKELKEVVAQN--PNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHhC--CCceEEEeccchHHHHHHHHHHH
Confidence 345666666666543 34689999999999999887754
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=93.16 E-value=0.08 Score=46.52 Aligned_cols=53 Identities=19% Similarity=0.119 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhc---CCCeeEEEEEcCccCC
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLAR---FPDVFQCAVSGAPVTS 469 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~---~~~~~~~~v~~~~~~~ 469 (571)
.++...++.+.++. ...+|.+.|||+||.+|..++.. ....+++....+|-..
T Consensus 109 ~~i~~~i~~~~~~~--~~~~i~vTGHSLGGAlA~L~a~~l~~~~~~~~~~tFG~PrvG 164 (261)
T d1uwca_ 109 DQVESLVKQQASQY--PDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSG 164 (261)
T ss_dssp HHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHHHTTCSSEEEEEESCCCCB
T ss_pred HHHHHHHHHHHhhC--CCcceEEeccchhHHHHHHHHHHHHhcCCCcceEEecCcccc
Confidence 45666677666653 34589999999999999877643 2334565555666543
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=92.74 E-value=2.2 Score=35.10 Aligned_cols=135 Identities=10% Similarity=0.030 Sum_probs=81.0
Q ss_pred eEEEEEEECC-CCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCe
Q 008274 79 KVRLGVVSAA-GGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSW 157 (571)
Q Consensus 79 ~~~l~~~dl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w 157 (571)
...||+.+++ .|+.+++.. +....+ .+-.-|++.++|+- ..++...+| -+++|..+.|+.-+.-.+
T Consensus 81 ~Hai~~~Nlk~~GEE~~i~s--------pk~vRI--~S~~yddk~vvF~G-ased~~~LY--viegGklrkL~~vPpFsF 147 (313)
T d2hu7a1 81 QHALFKVNTSRPGEEQRLEA--------VKPMRI--LSGVDTGEAVVFTG-ATEDRVALY--ALDGGGLRELARLPGFGF 147 (313)
T ss_dssp CEEEEEEETTSTTCEEECTT--------SCSBEE--EEEEECSSCEEEEE-ECSSCEEEE--EEETTEEEEEEEESSCEE
T ss_pred eeeEEEEccCCCCeeeEecC--------CceEEE--EEeeecCceEEEec-ccCCceEEE--EEeCCceeeeccCCCcce
Confidence 3568888888 366666632 122232 23445888888874 334554455 456888888876543333
Q ss_pred eeccCCcccCCCCCccCCCeEEEEE-ecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeE
Q 008274 158 VNLHDCFTPLDKGVTKYSGGFIWAS-EKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESH 236 (571)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~d~~~~~s-~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 236 (571)
+.+ ...|.++=.. -..+.+.++.-|+.++..+.+|.++-.+.... .+++++. +++-+.+.+..
T Consensus 148 VtD------------I~~d~I~G~g~~~g~~~sfF~adl~SG~lri~tpkeGS~~~ay-~~~gnKV---~sdyEt~gEsy 211 (313)
T d2hu7a1 148 VSD------------IRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSAS-ISPGMKV---TAGLETAREAR 211 (313)
T ss_dssp EEE------------EETTEEEEEEEEETTEEEEEEEETTTEEEEEECCSSEEEEEEE-ECTTSCE---EEEEEESSCEE
T ss_pred EEe------------ccCCeEEEEeeecCCcceEEEEecccCCEEEecCCCCccccee-EccCcee---eeccCCCCceE
Confidence 221 1233332222 12345668899999999999999988877764 7776664 55544444555
Q ss_pred EEEEEe
Q 008274 237 LYCAKL 242 (571)
Q Consensus 237 l~~~~l 242 (571)
+..+|+
T Consensus 212 wit~D~ 217 (313)
T d2hu7a1 212 LVTVDP 217 (313)
T ss_dssp EEEECT
T ss_pred EEEEec
Confidence 556676
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=92.55 E-value=1 Score=37.10 Aligned_cols=117 Identities=13% Similarity=0.007 Sum_probs=75.6
Q ss_pred CCCeEEEEEecCCccEEEEEeCCCceeeceeecCeEEEEEEEEeecCcEEEEEEc-CCCCceeEEEEEEeCCCCCCCCCC
Q 008274 174 YSGGFIWASEKTGFRHLYLHDINGTCLGPITEGDWMVEQIVGVNEASGQVYFTGT-LDGPLESHLYCAKLYPDWNHTLEA 252 (571)
Q Consensus 174 ~~d~~~~~s~~~g~~~l~~~~~~~~~~~~lT~~~~~~~~~~~~s~dg~~l~~~~~-~~~~~~~~l~~~~l~~~g~~~~~~ 252 (571)
.+|.+++++-..|--++|.++ +++...||+.......-+ .+.=+.+.|..+ ..+.....+|.+++...| +
T Consensus 24 ~~d~ll~~~~seG~vni~~l~--g~~~vkLtkePI~~~~~P--k~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~G-----E 94 (313)
T d2hu7a1 24 DGDKLLVVGFSEGSVNAYLYD--GGETVKLNREPINSVLDP--HYGVGRVILVRDVSKGAEQHALFKVNTSRPG-----E 94 (313)
T ss_dssp TTTEEEEEEEETTEEEEEEES--SSSCEECCSSCCSEECEE--CTTBSEEEEEEECSTTSCCEEEEEEETTSTT-----C
T ss_pred cCCcEEEEEeccceEEEEEEe--CCEEEEEecccccCcCCC--ccCcceEEEEeehhcCcceeeEEEEccCCCC-----e
Confidence 355688888788888898875 778889998764322111 112256777776 456666889999983224 4
Q ss_pred CeEecCCCceEEEEECCCCCEEEEEeeCCCCCCEEEEEEcCCCceeEeccC
Q 008274 253 PVKLTNGKGKHVAVLDHNMRNFVDFHDSLDSPPRILLCSLQDGSLVLPLYE 303 (571)
Q Consensus 253 ~~~lt~~~g~~~~~~s~~g~~~v~~~s~~~~p~~l~~~~~~~~~~~~~l~~ 303 (571)
..++....-.-..+..-|++.++|+.++.+.- .+|+++ |.+++.|..
T Consensus 95 E~~i~spk~vRI~S~~yddk~vvF~Gased~~-~LYvie---gGklrkL~~ 141 (313)
T d2hu7a1 95 EQRLEAVKPMRILSGVDTGEAVVFTGATEDRV-ALYALD---GGGLRELAR 141 (313)
T ss_dssp EEECTTSCSBEEEEEEECSSCEEEEEECSSCE-EEEEEE---TTEEEEEEE
T ss_pred eeEecCCceEEEEEeeecCceEEEecccCCce-EEEEEe---CCceeeecc
Confidence 55555443244456666889999998886543 566654 445677654
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.51 E-value=2.8 Score=35.90 Aligned_cols=112 Identities=14% Similarity=0.151 Sum_probs=55.6
Q ss_pred ceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCcc
Q 008274 109 EYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFR 188 (571)
Q Consensus 109 ~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~ 188 (571)
.....+++.++|++++ .++... .++.++..+......... . +... .....++++-+|+++. +..
T Consensus 98 ~~p~~iavd~~g~i~v--~d~~~~--~~~~~~~~~~~~~~~~~~---~-------~~~p-~~i~~~~~g~~~v~~~-~~~ 161 (260)
T d1rwia_ 98 NYPEGLAVDTQGAVYV--ADRGNN--RVVKLAAGSKTQTVLPFT---G-------LNDP-DGVAVDNSGNVYVTDT-DNN 161 (260)
T ss_dssp CSEEEEEECTTCCEEE--EEGGGT--EEEEECTTCSSCEECCCC---S-------CCSC-CEEEECTTCCEEEEEG-GGT
T ss_pred eecccccccccceeEe--eccccc--cccccccccceeeeeeec---c-------cCCc-ceeeecCCCCEeeecc-ccc
Confidence 4456788889987443 233322 477777776553322110 0 0000 0011123332344443 234
Q ss_pred EEEEEeCCCceeeceeecCeE-EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 189 HLYLHDINGTCLGPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 189 ~l~~~~~~~~~~~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
.|++++.++...+.+....+. ...+ .++++|+ ||++.... ..+++++.
T Consensus 162 ~i~~~d~~~~~~~~~~~~~~~~p~gi-~~d~~g~-l~vsd~~~----~~i~~~~~ 210 (260)
T d1rwia_ 162 RVVKLEAESNNQVVLPFTDITAPWGI-AVDEAGT-VYVTEHNT----NQVVKLLA 210 (260)
T ss_dssp EEEEECTTTCCEEECCCSSCCSEEEE-EECTTCC-EEEEETTT----TEEEEECT
T ss_pred cccccccccceeeeeeccccCCCccc-eeeeeee-eeeeecCC----CEEEEEeC
Confidence 688888877654444333222 2333 4777775 66655433 35777765
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.81 E-value=2.5 Score=36.95 Aligned_cols=151 Identities=9% Similarity=-0.014 Sum_probs=73.5
Q ss_pred EEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEEEEE
Q 008274 114 VNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLH 193 (571)
Q Consensus 114 ~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~ 193 (571)
..+++|++.++...... .|.+.|+.+++.......... ... .+ .++++ +++....+|. |+++
T Consensus 181 ~~~~~~~~~l~s~~~dg----~i~~~d~~~~~~~~~~~~~~~-~v~---~~-------~~~~~-~l~s~s~d~~--i~iw 242 (342)
T d2ovrb2 181 YSLQFDGIHVVSGSLDT----SIRVWDVETGNCIHTLTGHQS-LTS---GM-------ELKDN-ILVSGNADST--VKIW 242 (342)
T ss_dssp EEEEECSSEEEEEETTS----CEEEEETTTCCEEEEECCCCS-CEE---EE-------EEETT-EEEEEETTSC--EEEE
T ss_pred ccccCCCCEEEEEeCCC----eEEEeecccceeeeEeccccc-cee---EE-------ecCCC-EEEEEcCCCE--EEEE
Confidence 45667777666554333 378888888875433221111 110 01 12233 4444444553 5666
Q ss_pred eCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEcCCCCceeEEEEEEeCCCCCCCCCCCeEecC--C----CceEEEE
Q 008274 194 DINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGTLDGPLESHLYCAKLYPDWNHTLEAPVKLTN--G----KGKHVAV 266 (571)
Q Consensus 194 ~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l~~~g~~~~~~~~~lt~--~----~g~~~~~ 266 (571)
+....+. ..+............++.+++.++.. ..++ .|...++. .+. ....+.. . .....+.
T Consensus 243 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-s~Dg----~i~iwd~~-tg~----~i~~~~~~~~~~~~~~v~~v~ 312 (342)
T d2ovrb2 243 DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS-SDDG----TVKLWDLK-TGE----FIRNLVTLESGGSGGVVWRIR 312 (342)
T ss_dssp ETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEE-ETTS----EEEEEETT-TCC----EEEEEEECTTGGGTCEEEEEE
T ss_pred ecccccccccccccceeeeceeecccCCCeeEEE-cCCC----EEEEEECC-CCC----EEEEEecccCCCCCCCEEEEE
Confidence 6555433 33332221222222355566655544 4443 34445552 232 2233321 1 1234568
Q ss_pred ECCCCCEEEEEeeCCCCCCEEEEEEc
Q 008274 267 LDHNMRNFVDFHDSLDSPPRILLCSL 292 (571)
Q Consensus 267 ~s~~g~~~v~~~s~~~~p~~l~~~~~ 292 (571)
++|++..++......+.-..|++.|+
T Consensus 313 ~s~~~~~la~g~~dGt~~~~l~~~Df 338 (342)
T d2ovrb2 313 ASNTKLVCAVGSRNGTEETKLLVLDF 338 (342)
T ss_dssp ECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred ECCCCCEEEEEeCCCCCeeEEEEEeC
Confidence 99998766655444445567787776
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=91.32 E-value=2.1 Score=39.63 Aligned_cols=108 Identities=7% Similarity=0.118 Sum_probs=57.8
Q ss_pred CceeEEEEEcc---CCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCe-EEEEEe
Q 008274 108 EEYLARVNWMH---GNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGG-FIWASE 183 (571)
Q Consensus 108 ~~~~~~~~wsp---Dg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~-~~~~s~ 183 (571)
+-....+++.- ||+++ |+.+..+ .+|.++|+++-++.+|.+-+....... +++ ...++. +++...
T Consensus 84 D~HHP~~S~TdGtyDGryl-FVNDkan--~RVAvIdl~~fkt~kIi~iPn~~~~HG---~r~-----~~~p~T~YV~~~~ 152 (459)
T d1fwxa2 84 DLHHVHMSFTEGKYDGRFL-FMNDKAN--TRVARVRCDVMKCDAILEIPNAKGIHG---LRP-----QKWPRSNYVFCNG 152 (459)
T ss_dssp CBCCEEEEEETTEEEEEEE-EEEETTT--TEEEEEETTTTEEEEEEECSSCCSEEE---EEE-----CCSSBCSEEEEEE
T ss_pred CcCCCcccccCCccceeEE-EEEcCCC--ceEEEEECcceeeeEEEecCCCCCCce---eec-----ccCCCeEEEEccC
Confidence 33334555543 77654 4444443 369999999999988877543322211 111 112333 444322
Q ss_pred c-------CC--------c-cEEEEEeCCCcee-eceeecCeEEEEEEEEeecCcEEEEEEc
Q 008274 184 K-------TG--------F-RHLYLHDINGTCL-GPITEGDWMVEQIVGVNEASGQVYFTGT 228 (571)
Q Consensus 184 ~-------~g--------~-~~l~~~~~~~~~~-~~lT~~~~~~~~~~~~s~dg~~l~~~~~ 228 (571)
+ +| + .-+..+|.++.+. .++.-+. +... ..+++||+++|+++-
T Consensus 153 e~~vP~pndg~~l~d~~~y~~~~t~ID~~tm~V~~QV~V~g-~ld~-~~~s~dGK~af~Tsy 212 (459)
T d1fwxa2 153 EDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDN-CDADYEGKWAFSTSY 212 (459)
T ss_dssp CSCEESSCSSSSTTCGG-EEEEEEEEETTTTEEEEEEEESS-CCCC-EEECSSSSEEEEEES
T ss_pred ccccccCCCCccccchhhcceEEEEEecCCceEEEEeeeCC-Chhc-cccCCCCCEEEEEec
Confidence 1 11 2 2345677776653 3443322 1222 348999999999874
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.16 E-value=0.23 Score=44.33 Aligned_cols=80 Identities=14% Similarity=-0.026 Sum_probs=48.4
Q ss_pred CCceEEECCCCCeEEEEEEeCCCCCeEEEeecCCCCCCCCCcccccCCCCCCCCceEEEEEEECCCCce-EEEeccCCCC
Q 008274 24 RKTGYWWSLDSKFIAFTQVDSSEIPRFRIMHQGKSSVGSEAQEDHAYPFAGASNVKVRLGVVSAAGGPV-SWMDLQCGGT 102 (571)
Q Consensus 24 ~~~~~~wSPDg~~iay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~dl~~~~~-~~~~~~~~~~ 102 (571)
....+.|||||++||-.+.| + .|.+||++++.. ..+...
T Consensus 13 ~I~~l~fsp~~~~L~s~s~D-g-----------------------------------~v~iwd~~~~~~~~~~~~~---- 52 (342)
T d1yfqa_ 13 YISDIKIIPSKSLLLITSWD-G-----------------------------------SLTVYKFDIQAKNVDLLQS---- 52 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETT-S-----------------------------------EEEEEEEETTTTEEEEEEE----
T ss_pred CEEEEEEeCCCCEEEEEECC-C-----------------------------------eEEEEEccCCCcceEEEEe----
Confidence 34688999999999765432 1 357778765432 222111
Q ss_pred CCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEE
Q 008274 103 DQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKV 148 (571)
Q Consensus 103 ~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~ 148 (571)
......+..++|+|++..+++....++ .|...+..++....
T Consensus 53 --~~h~~~V~~v~f~~~~~~~l~sg~~d~---~v~~w~~~~~~~~~ 93 (342)
T d1yfqa_ 53 --LRYKHPLLCCNFIDNTDLQIYVGTVQG---EILKVDLIGSPSFQ 93 (342)
T ss_dssp --EECSSCEEEEEEEESSSEEEEEEETTS---CEEEECSSSSSSEE
T ss_pred --cCCCCCEEEEEEeCCCCCEEEEccccc---ceeeeecccccccc
Confidence 123456788999998764444444443 27777777765443
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.15 E-value=0.92 Score=39.44 Aligned_cols=33 Identities=6% Similarity=0.145 Sum_probs=20.5
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCe
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNI 121 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~ 121 (571)
+.+||+.+++...... ......+..++|+|+++
T Consensus 186 i~i~d~~~~~~~~~~~-------~~h~~~v~~~~~~p~~~ 218 (287)
T d1pgua2 186 ILLYDLQSREVKTSRW-------AFRTSKINAISWKPAEK 218 (287)
T ss_dssp EEEEETTTTEEEECCS-------CCCSSCEEEEEECCCC-
T ss_pred ccceeecccccccccc-------cccccccceeeeccccc
Confidence 5778888876543222 22345677789998765
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=90.20 E-value=2.1 Score=36.76 Aligned_cols=110 Identities=11% Similarity=0.093 Sum_probs=56.8
Q ss_pred eEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecCCeeeccCCcccCCCCCccCCCeEEEEEecCCccEE
Q 008274 111 LARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELDSWVNLHDCFTPLDKGVTKYSGGFIWASEKTGFRHL 190 (571)
Q Consensus 111 ~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l 190 (571)
...++.+|+|+.++ ..... ..|+++|.++.....+... .-. .| .+...++++-+++++.. ...|
T Consensus 142 p~~i~~~~~g~~~v--~~~~~--~~i~~~d~~~~~~~~~~~~-~~~--------~p--~gi~~d~~g~l~vsd~~-~~~i 205 (260)
T d1rwia_ 142 PDGVAVDNSGNVYV--TDTDN--NRVVKLEAESNNQVVLPFT-DIT--------AP--WGIAVDEAGTVYVTEHN-TNQV 205 (260)
T ss_dssp CCEEEECTTCCEEE--EEGGG--TEEEEECTTTCCEEECCCS-SCC--------SE--EEEEECTTCCEEEEETT-TTEE
T ss_pred cceeeecCCCCEee--ecccc--ccccccccccceeeeeecc-ccC--------CC--ccceeeeeeeeeeeecC-CCEE
Confidence 34578889998433 22322 2599999887654432111 000 01 01123455545566553 3468
Q ss_pred EEEeCCCceeeceeecCeE-EEEEEEEeecCcEEEEEEcCCCCceeEEEEEEe
Q 008274 191 YLHDINGTCLGPITEGDWM-VEQIVGVNEASGQVYFTGTLDGPLESHLYCAKL 242 (571)
Q Consensus 191 ~~~~~~~~~~~~lT~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~l 242 (571)
++++.++...+.+....+. ...+ .++++|+ ||++-... ..|.+++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~P~~i-~~d~~g~-l~vad~~~----~rI~~i~~ 252 (260)
T d1rwia_ 206 VKLLAGSTTSTVLPFTGLNTPLAV-AVDSDRT-VYVADRGN----DRVVKLTS 252 (260)
T ss_dssp EEECTTCSCCEECCCCSCCCEEEE-EECTTCC-EEEEEGGG----TEEEEECC
T ss_pred EEEeCCCCeEEEEccCCCCCeEEE-EEeCCCC-EEEEECCC----CEEEEEeC
Confidence 8888777655555443322 2334 3787775 66653322 35555543
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.21 E-value=0.43 Score=42.35 Aligned_cols=39 Identities=3% Similarity=-0.148 Sum_probs=25.1
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEec
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNR 129 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r 129 (571)
|.+||+++++... ++ .........+|+|||+.++.....
T Consensus 275 v~vWD~~~~~~l~-~~--------~~~~~~~~~~~s~~~~~l~~a~sd 313 (342)
T d1yfqa_ 275 ISCWNLQTRKKIK-NF--------AKFNEDSVVKIACSDNILCLATSD 313 (342)
T ss_dssp EEEEETTTTEEEE-EC--------CCCSSSEEEEEEECSSEEEEEEEC
T ss_pred EEEEECCCCcEEE-Ee--------cCCCCCEEEEEEeCCCEEEEEEcC
Confidence 6889999886532 22 122334457899999977766544
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=86.63 E-value=1.1 Score=36.93 Aligned_cols=49 Identities=16% Similarity=0.086 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHHcCCCcCCcEEEEeechHHHHHHHHHhcCC----CeeEEEEEcC
Q 008274 415 EDQLTGAEWLIKQGLAKVGHIGLYGWSYGGYLSAITLARFP----DVFQCAVSGA 465 (571)
Q Consensus 415 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~~~~~~----~~~~~~v~~~ 465 (571)
.++...+....++ ....|++|.|+|.|+.++..++..-+ +++++++++.
T Consensus 80 ~~~~~~i~~~a~~--CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfG 132 (197)
T d1cexa_ 80 REMLGLFQQANTK--CPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFG 132 (197)
T ss_dssp HHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEES
T ss_pred HHHHHHHHHHHhh--CCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEe
Confidence 4455555555554 24679999999999999988876543 4677766654
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.21 E-value=9.5 Score=32.84 Aligned_cols=133 Identities=20% Similarity=0.189 Sum_probs=71.8
Q ss_pred EEEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEEEEeecC--Cee
Q 008274 81 RLGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVILVEELD--SWV 158 (571)
Q Consensus 81 ~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l~~~~~~--~w~ 158 (571)
.+.+||+.+++...... .....+..+.| ++++++...... .|.+.|..+++.......... ...
T Consensus 198 ~i~~~d~~~~~~~~~~~--------~~~~~v~~~~~--~~~~l~s~s~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~ 263 (342)
T d2ovrb2 198 SIRVWDVETGNCIHTLT--------GHQSLTSGMEL--KDNILVSGNADS----TVKIWDIKTGQCLQTLQGPNKHQSAV 263 (342)
T ss_dssp CEEEEETTTCCEEEEEC--------CCCSCEEEEEE--ETTEEEEEETTS----CEEEEETTTCCEEEEECSTTSCSSCE
T ss_pred eEEEeecccceeeeEec--------ccccceeEEec--CCCEEEEEcCCC----EEEEEecccccccccccccceeeece
Confidence 36888999877654322 23334444444 455665554333 388889988776543322111 000
Q ss_pred eccCCcccCCCCCccCCCeEEEEEecCCccEEEEEeCCCcee-eceee-----cCeEEEEEEEEeecCcEEEEEEcCCCC
Q 008274 159 NLHDCFTPLDKGVTKYSGGFIWASEKTGFRHLYLHDINGTCL-GPITE-----GDWMVEQIVGVNEASGQVYFTGTLDGP 232 (571)
Q Consensus 159 ~~~~~~~~~~~~~~~~~d~~~~~s~~~g~~~l~~~~~~~~~~-~~lT~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~ 232 (571)
. .+ .++++ +++....+| .|.++++.+++. +.+.. ....+..+ .|+|++. ++.++..+|-
T Consensus 264 ~---~~-------~~~~~-~~~s~s~Dg--~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v-~~s~~~~-~la~g~~dGt 328 (342)
T d2ovrb2 264 T---CL-------QFNKN-FVITSSDDG--TVKLWDLKTGEFIRNLVTLESGGSGGVVWRI-RASNTKL-VCAVGSRNGT 328 (342)
T ss_dssp E---EE-------EECSS-EEEEEETTS--EEEEEETTTCCEEEEEEECTTGGGTCEEEEE-EECSSEE-EEEEECSSSS
T ss_pred e---ec-------ccCCC-eeEEEcCCC--EEEEEECCCCCEEEEEecccCCCCCCCEEEE-EECCCCC-EEEEEeCCCC
Confidence 0 00 12333 444444555 577778766543 34432 12345555 4888764 5566666665
Q ss_pred ceeEEEEEEe
Q 008274 233 LESHLYCAKL 242 (571)
Q Consensus 233 ~~~~l~~~~l 242 (571)
....|+..++
T Consensus 329 ~~~~l~~~Df 338 (342)
T d2ovrb2 329 EETKLLVLDF 338 (342)
T ss_dssp SCCEEEEEEC
T ss_pred CeeEEEEEeC
Confidence 5677888887
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.31 E-value=11 Score=32.67 Aligned_cols=55 Identities=4% Similarity=-0.105 Sum_probs=31.7
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCce
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQR 146 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~ 146 (571)
+.+|++..++....... ...........++++++.++...... .|...|+.++..
T Consensus 76 i~iw~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~d~----~i~iw~~~~~~~ 130 (355)
T d1nexb2 76 VRVWDIKKGCCTHVFEG------HNSTVRCLDIVEYKNIKYIVTGSRDN----TLHVWKLPKESS 130 (355)
T ss_dssp EEEEETTTTEEEEEECC------CSSCEEEEEEEEETTEEEEEEEETTS----EEEEEECCC---
T ss_pred ccccccccccccccccc------ccccccccccccccccceeeeecCCC----cEEEEEccCCce
Confidence 67788887765544332 12233445567788888777665433 367777777653
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.04 E-value=11 Score=31.54 Aligned_cols=54 Identities=11% Similarity=0.079 Sum_probs=33.6
Q ss_pred EEEEECCCCceEEEeccCCCCCCCCCCceeEEEEEccCCeEEEEEEeccCccEEEEEEECCCCceEEE
Q 008274 82 LGVVSAAGGPVSWMDLQCGGTDQNYDEEYLARVNWMHGNILTAQVLNRSQTKLKVLKFDIKTGQRKVI 149 (571)
Q Consensus 82 l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~i~~~~~r~~~~~~i~~~d~~~g~~~~l 149 (571)
|.+||+.+++.... + ......+..+.| |+++++...... .|...++.++.....
T Consensus 37 i~vWd~~~~~~~~~-l-------~~H~~~V~~v~~--~~~~l~s~s~D~----~i~~~~~~~~~~~~~ 90 (293)
T d1p22a2 37 IKIWDKNTLECKRI-L-------TGHTGSVLCLQY--DERVIITGSSDS----TVRVWDVNTGEMLNT 90 (293)
T ss_dssp EEEEESSSCCEEEE-E-------CCCSSCEEEEEC--CSSEEEEEETTS----CEEEEESSSCCEEEE
T ss_pred EEEEECCCCcEEEE-E-------ecCCCCEeeeec--ccceeecccccc----ccccccccccccccc
Confidence 57889998876543 2 223445655555 777666554333 378888888876544
|