Citrus Sinensis ID: 008317

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

MHGLSRLGSARSTTSSPPSSPRFRHGRNKNIAGSRVGSGGGKQNLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDVVDLKSVVVVRERAPPGSVYRSPQVFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRWDDFKRQMKDMLSHSDVKGSELRKPSASLYTFPMPDCMCKQPEASNEHGNTKKLTS

cccccccccccccccccccccccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHcccccEEEccccHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHHHcccEEEccccccccccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccEEEEEcccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHcccccccEEEEEEcEEcccccccHHHHHHccccccccccccHHHHHHHcccccccccccEEEEEccEEEEEccccccccccccccccccccccEEEcccHHHHHHHHccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccc

ccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEcccccccccccHHHHHHHHHHHcccccccccHHHHcccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccHHHHccHHHHHHHHHHHcEHHHcccHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccEEEEcccHHHHHccccHHHHHHEEHHHHHHHHccHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccEEEEEcccccccHHHHHHHHHHHHHccHHHHccccccccHHHHHHcccccccHHHHHHHHHHcccccccEEEEEEcccccccHHHHHHHHHccccccccccccHHHHHHccccHHHHHHHHHEEEccccEEEEcccccHHHHHHHHHHHHHccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccHccccccccccccccccccccccHHHcc

mhglsrlgsarsttssppssprfrhgrnkniagsrvgsgggkqNLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSsfgfdvvdlKSVVVVrerappgsvyrspqvfQKLWPFMQAEAIANNTLMTawnskvhqpwkpcadrsnsnaelpksngFLIIEangglnqqrLSICDAVAVAGLLNATLVIPIFHlnsvwrdssnfgdifdedFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLrvkgwsspthyLQKVLPKLqhlgavriapfsnrlaqgvpsniqgLRCLANFEALRFSEPIRMLAEKMVDRMVknssqsggkyVSVHLRFETDMVAfscceydggeeeKREMDIARERSWRgkfrkrgrvirpganrvdgkcpltpleVGMMlrgmgfdntTSVYVAAGKIykaekyvaplrqmfprletkdtlatpeELAAFKGHSSRLAALDYTVCLHSEVFVttqggnfphflmghrrylygghaktikpdkrklallfdrpnirwdDFKRQMKDmlshsdvkgselrkpsaslytfpmpdcmckqpeasnehgntkklts

mhglsrlgsarsttssppssprfrhgrnkniagsrvgsgggkqnLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDVVDLKSVVVVRErappgsvyrspqvFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEydggeeekremdiarerswrgkfrkrgrvirpganrvdgkcplTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHaktikpdkrklallfdrpnirwddFKRQMKDMlshsdvkgselrkPSASLYTFPMPDCMCKqpeasnehgntkklts

MHGLSRLGSARsttssppsspRFRHGRNKNIAGSRVGSGGGKQNLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDvvdlksvvvvRERAPPGSVYRSPQVFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRWDDFKRQMKDMLSHSDVKGSELRKPSASLYTFPMPDCMCKQPEASNEHGNTKKLTS

*******************************************NLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDVVDLKSVVVVRERAPPGSVYRSPQVFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPC*************NGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDR*********GKYVSVHLRFETDMVAFSCCEYDG***************WRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRWDDFK***************************************************

*************************************************VVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDVV************************************************VHQPWK***************NGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVD**************SVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRV******RVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIR**D**************************YTFPMPDC*******************

************************HGRNKNIAGSRVGSGGGKQNLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDVVDLKSVVVVRERAPPGSVYRSPQVFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRWDDFKRQMKDMLSHSDVKGSELRKPSASLYTFPMPDCMCKQP**************

******************************************QNLVEKLVVVLISAVFKRKGVLLVAPLLYISVMLLYMSSFGFDVVDLKSVVVVRERAPPGSVYRSPQVFQKLWPFMQAEAIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRWDDFKRQMKDMLSHS**KGSEL****ASLYTFPMPDCMCKQ***************

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		570	2.2.26 [Sep-21-2011]
Q8W486		519	Uncharacterized protein A	no	no	0.728	0.799	0.362	6e-69

>sp\|Q8W486\|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1	Back alignment and function desciption

 Score =  262 bits (669), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 158/436 (36%), Positives = 247/436 (56%), Gaps = 21/436 (4%)

Query: 132 WNSKVHQPWKPC-ADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDAVAVAGLLNATLV 190
           W S     W+P  A RS+      ++NG+L +  NGGLNQQR +IC+AV  A ++NATLV
Sbjct: 63  WESAKSGGWRPSSAPRSDWPPPTKETNGYLRVRCNGGLNQQRSAICNAVLAARIMNATLV 122

Query: 191 IPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFDHNISSIVNLRVK 250
           +P    NS W D S F  I+D + F+  L+ +V +V ++P D+ +           +R  
Sbjct: 123 LPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIP-DVHKNGKTKKIKAFQIRPP 181

Query: 251 GWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPS-NIQGLRCLANFEALRFSEPIRM 309
             +    YL   L  ++   A+ + PFS+RLA+ + +   Q LRC  N+ ALRF   I  
Sbjct: 182 RDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPHIMK 241

Query: 310 LAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGK 369
           L+E +VD++     +S G ++S+HLRFE DM+AF+ C      EE++ +   R+ ++  K
Sbjct: 242 LSESIVDKL-----RSQGHFMSIHLRFEMDMLAFAGCFDIFNPEEQKILRKYRKENFADK 296

Query: 370 FRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQ 429
                R+I     R  GKCPLTP EVG++LR M FDN+T +Y+AAG+++  E+++ P R 
Sbjct: 297 -----RLIY-NERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRT 350

Query: 430 MFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGG--NFPHFLMGHRR 487
           +FPRL+   ++   EEL+A        +A+DY VCL S++F+ T  G  NF + L+GHR 
Sbjct: 351 LFPRLDNHSSVDPSEELSA-TSQGLIGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHR- 408

Query: 488 YLYGGHAKTIKPDKRKLALLF-DRPNIRWDDFKRQMKDMLSHSDVKGSELRKPSASLYTF 546
            LY G   TI+PD++ LA +F  R   +   F+  ++ ++  ++  G   R    S YT 
Sbjct: 409 -LYYGFRTTIRPDRKALAPIFIAREKGKRAGFEEAVRRVMLKTNFGGPHKRVSPESFYTN 467

Query: 547 PMPDCMCK-QPEASNE 561
             P+C C+  P+ S++
Sbjct: 468 SWPECFCQMNPKKSSD 483

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		570
356507704		683	PREDICTED: DUF246 domain-containing prot	0.982	0.819	0.771	0.0
359493257		582	PREDICTED: DUF246 domain-containing prot	0.996	0.975	0.757	0.0
255585812		587	conserved hypothetical protein [Ricinus	0.994	0.965	0.769	0.0
356515426		566	PREDICTED: DUF246 domain-containing prot	0.982	0.989	0.762	0.0
224146358		584	predicted protein [Populus trichocarpa]	0.991	0.967	0.760	0.0
449447613		573	PREDICTED: DUF246 domain-containing prot	0.982	0.977	0.755	0.0
297846612		569	hypothetical protein ARALYDRAFT_473680 [	0.968	0.970	0.738	0.0
15293043		568	putative growth regulator protein [Arabi	0.973	0.977	0.735	0.0
18399706		568	O-fucosyltransferase-like protein [Arabi	0.973	0.977	0.735	0.0
296081017		492	unnamed protein product [Vitis vinifera]	0.859	0.995	0.796	0.0

>gi\|356507704\|ref\|XP_003522604.1\| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max]	Back alignment and taxonomy information

 Score =  910 bits (2353), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/569 (77%), Positives = 490/569 (86%), Gaps = 9/569 (1%)

Query: 1   MHGLSRLGSARSTTSSPPSSPRFRHGRNKNIAGSRVGSGGGKQNLVEKLVVVLISAVFKR 60
           MHG SRLG A     SPPSSPRFRHGR+K+ +           N +EKLV +L+SAVF+R
Sbjct: 118 MHGYSRLGGA---ARSPPSSPRFRHGRSKSSSWCSSKE----SNSMEKLVFILMSAVFRR 170

Query: 61  KGVLLVAPLLYISVMLLYMSSFGFDVVDLKS-VVVVRERAPPGSVYRSPQVFQKLWPFMQ 119
           +G+LL APLLYIS MLLYM S   DVV +K+ VV+V +RAPPGSVYRSPQ+FQ LWPFM+
Sbjct: 171 RGLLLFAPLLYISGMLLYMGSLSIDVVSIKNGVVLVHKRAPPGSVYRSPQLFQNLWPFME 230

Query: 120 AE-AIANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQRLSICDA 178
           A+     N LM AW  K  + WKPCA+RS    ELPKSNGFLIIEANGGLNQQRLSICDA
Sbjct: 231 ADNGTTLNVLMRAWTKKELREWKPCANRSVPEIELPKSNGFLIIEANGGLNQQRLSICDA 290

Query: 179 VAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPEDILQQFD 238
           VAVAGLLNATL+IPIFHLNSVWRDSSNFGDIFDE+FF+ +L + V+VV+ELP+DILQ+FD
Sbjct: 291 VAVAGLLNATLLIPIFHLNSVWRDSSNFGDIFDENFFIQSLGNRVHVVRELPDDILQRFD 350

Query: 239 HNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQGLRCLANF 298
           +NIS+IVNLRVKGWSS  HYLQKVLP+L  +GAVRIAPFSNRLAQ VPS IQGLRC ANF
Sbjct: 351 NNISNIVNLRVKGWSSSAHYLQKVLPQLLEMGAVRIAPFSNRLAQAVPSKIQGLRCFANF 410

Query: 299 EALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREM 358
            ALRFSEPIR LAE MVDRMVK SS SGGKYVSVHLRFE DMVAFSCCEYDGGEEEK EM
Sbjct: 411 GALRFSEPIRTLAESMVDRMVKYSSHSGGKYVSVHLRFEEDMVAFSCCEYDGGEEEKHEM 470

Query: 359 DIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIY 418
           DIARERSWRGKFR++ R+I+PGANRVDG+CPLTPLEVGMMLRGMGFDNTTSVYVAAGKIY
Sbjct: 471 DIARERSWRGKFRRKHRIIKPGANRVDGRCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIY 530

Query: 419 KAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNF 478
           K +KY+APL+QMFPRL+TK+TLATPEELA F GHS+RLAALDYTVCLHSEVFVTTQGGNF
Sbjct: 531 KEQKYMAPLKQMFPRLQTKNTLATPEELAQFMGHSTRLAALDYTVCLHSEVFVTTQGGNF 590

Query: 479 PHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRWDDFKRQMKDMLSHSDVKGSELRK 538
           PHFLMGHRRY+YGGHAKTIKPDKR+LALLFD PNIRW+ FK+QMKDML HSD KG+EL+K
Sbjct: 591 PHFLMGHRRYMYGGHAKTIKPDKRRLALLFDNPNIRWEVFKQQMKDMLRHSDQKGTELKK 650

Query: 539 PSASLYTFPMPDCMCKQPEASNEHGNTKK 567
              SLYTFPMPDCMC+Q E  +E+GNT K
Sbjct: 651 AGESLYTFPMPDCMCRQAEPKSENGNTTK 679

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359493257\|ref\|XP_002272758.2\| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255585812\|ref\|XP_002533585.1\| conserved hypothetical protein [Ricinus communis] gi\|223526544\|gb\|EEF28803.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|356515426\|ref\|XP_003526401.1\| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max]	Back alignment and taxonomy information

>gi\|224146358\|ref\|XP_002325978.1\| predicted protein [Populus trichocarpa] gi\|222862853\|gb\|EEF00360.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449447613\|ref\|XP_004141562.1\| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] gi\|449506825\|ref\|XP_004162859.1\| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297846612\|ref\|XP_002891187.1\| hypothetical protein ARALYDRAFT_473680 [Arabidopsis lyrata subsp. lyrata] gi\|297337029\|gb\|EFH67446.1\| hypothetical protein ARALYDRAFT_473680 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|15293043\|gb\|AAK93632.1\| putative growth regulator protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|18399706\|ref\|NP_564461.1\| O-fucosyltransferase-like protein [Arabidopsis thaliana] gi\|23297509\|gb\|AAN12984.1\| putative growth regulator [Arabidopsis thaliana] gi\|332193681\|gb\|AEE31802.1\| O-fucosyltransferase-like protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|296081017\|emb\|CBI18521.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		570
TAIR\|locus:2014666		568	AT1G35510 [Arabidopsis thalian	0.973	0.977	0.714	2.2e-217
TAIR\|locus:2049527		567	AT2G01480 [Arabidopsis thalian	0.924	0.929	0.577	4.5e-169
TAIR\|locus:2006852		562	AT1G14970 [Arabidopsis thalian	0.903	0.916	0.560	3.6e-160
TAIR\|locus:504956200		589	AT1G38131 [Arabidopsis thalian	0.822	0.796	0.580	5.5e-148
TAIR\|locus:1005716710		470	AT1G38065 "AT1G38065" [Arabido	0.740	0.897	0.617	4.2e-143
TAIR\|locus:2168297		504	AT5G65470 [Arabidopsis thalian	0.391	0.442	0.419	1.7e-86
TAIR\|locus:2029984		611	AT1G29200 [Arabidopsis thalian	0.422	0.394	0.399	2.7e-86
TAIR\|locus:2121909		519	AT4G24530 [Arabidopsis thalian	0.407	0.447	0.375	2.2e-84
TAIR\|locus:2079281		557	AT3G26370 [Arabidopsis thalian	0.717	0.734	0.390	1.8e-80
TAIR\|locus:2121793		551	RHS17 "root hair specific 17"	0.777	0.803	0.376	5.4e-79

TAIR\|locus:2014666 AT1G35510 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2100 (744.3 bits), Expect = 2.2e-217, P = 2.2e-217
 Identities = 407/570 (71%), Positives = 466/570 (81%)

Query:     1 MHGLSRLGSARXXXXXXX------XXXRFRHGRNKNIAGSRVGSGGGKQNLVEKLVVVLI 54
             MHGLSRLG+                  R RH R K++AG     G  KQ L E+LV +L 
Sbjct:     1 MHGLSRLGNGSSNGRINIPSPSPPSSPRIRHTRGKSLAG-----GVYKQGLGERLVFLLF 55

Query:    55 SAVFKRKGVLLVAPLLYISVMLLYMSSFGFDXXXXXXXXXX-RERAPPGSVYRSPQVFQK 113
             S VF+RKGVLL+APLLYI+ MLL+M SFGF              R  PGSVYRSP+VF++
Sbjct:    56 SIVFRRKGVLLLAPLLYIAGMLLFMGSFGFTVLDLGHGVEIVYRRGSPGSVYRSPKVFKR 115

Query:   114 LWPFMQAEA--IANNTLMTAWNSKVHQPWKPCADRSNSNAELPKSNGFLIIEANGGLNQQ 171
             LWP M+A+    ++N LM AW  +V   WKPC   +N +A    SNG+ IIEANGGLNQQ
Sbjct:   116 LWPVMEADVNGSSHNVLMEAWKPRVKSVWKPCIS-TNVSAAGSNSNGYFIIEANGGLNQQ 174

Query:   172 RLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHALRSNVNVVKELPE 231
             RLSICDAVAVAGLLNATLVIPIFHLNSVWRDSS FGDIFDEDFF++AL  NVNVVKELP+
Sbjct:   175 RLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSKFGDIFDEDFFIYALSKNVNVVKELPK 234

Query:   232 DILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFSNRLAQGVPSNIQG 291
             D+L+++++NISSIVNLR+K WSSP +YLQKVLP+L  LGAVR+APFSNRLA  VP++IQG
Sbjct:   235 DVLERYNYNISSIVNLRLKAWSSPAYYLQKVLPQLLRLGAVRVAPFSNRLAHAVPAHIQG 294

Query:   292 LRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGG 351
             LRCLANFEALRF+EPIR+LAEKMVDRMV  S +SGGKYVSVHLRFE DMVAFSCCEYD G
Sbjct:   295 LRCLANFEALRFAEPIRLLAEKMVDRMVTKSVESGGKYVSVHLRFEMDMVAFSCCEYDFG 354

Query:   352 EEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVY 411
             + EK EMD+ARER W+GKFR+RGRVIRPGANR+DGKCPLTPLEVGMMLRGMGF+N+T VY
Sbjct:   355 QAEKLEMDMARERGWKGKFRRRGRVIRPGANRIDGKCPLTPLEVGMMLRGMGFNNSTLVY 414

Query:   412 VAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFV 471
             VAAG IYKA+KY+APLRQMFP L+TKDTLATPEELA FKGHSSRLAALDYTVCLHSEVFV
Sbjct:   415 VAAGNIYKADKYMAPLRQMFPLLQTKDTLATPEELAPFKGHSSRLAALDYTVCLHSEVFV 474

Query:   472 TTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDRPNIRWDDFKRQMKDMLSHSDV 531
             +TQGGNFPHFL+GHRRYLY GHA+TIKPDKRKL  L D+P+IRWD FK+QM+DML H+D 
Sbjct:   475 STQGGNFPHFLIGHRRYLYKGHAETIKPDKRKLVQLLDKPSIRWDYFKKQMQDMLRHNDA 534

Query:   532 KGSELRKPSASLYTFPMPDCMCKQPEASNE 561
             KG ELRKP+ASLYTFPMPDCMCK+P+   E
Sbjct:   535 KGVELRKPAASLYTFPMPDCMCKEPDPEPE 564

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR\|locus:2049527 AT2G01480 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2006852 AT1G14970 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:504956200 AT1G38131 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:1005716710 AT1G38065 "AT1G38065" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2168297 AT5G65470 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2029984 AT1G29200 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2121909 AT4G24530 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2079281 AT3G26370 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2121793 RHS17 "root hair specific 17" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		570
cd11299		290	cd11299, O-FucT_plant, GDP-fucose protein O-fucosy	1e-149
pfam10250		315	pfam10250, O-FucT, GDP-fucose protein O-fucosyltra	1e-110
cd11296		206	cd11296, O-FucT_like, GDP-fucose protein O-fucosyl	7e-13

>gnl\|CDD\|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily	Back alignment and domain information

 Score =  430 bits (1107), Expect = e-149
 Identities = 167/336 (49%), Positives = 211/336 (62%), Gaps = 48/336 (14%)

Query: 159 FLIIEANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSNFGDIFDEDFFMHA 218
           +L++ ANGGLNQQR  ICDAVAVA LLNATLV+P    NSVW DSS FGDI+D D F+ +
Sbjct: 1   YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60

Query: 219 LRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPKLQHLGAVRIAPFS 278
           L+ +V VVK+LPE++  +       I   RV   SSP++YL++VLP L+  G +R+APF 
Sbjct: 61  LKDDVRVVKKLPEELASKKPE----ITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFD 116

Query: 279 NRLA-QGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFE 337
           +RLA   +P  IQ LRC  NF ALRF   I  L +K+VDR+ +     GG ++++HLRFE
Sbjct: 117 SRLANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLREA----GGPFLALHLRFE 172

Query: 338 TDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDGKCPLTPLEVGM 397
            DM+AFS C                                       GKCPLTP EVG+
Sbjct: 173 KDMLAFSGC---------------------------------------GKCPLTPEEVGL 193

Query: 398 MLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLA 457
           +LR +GF  +T +Y+AAG+IY  E+ + PLR +FP L TK+TLAT EELA F GHSSRLA
Sbjct: 194 LLRALGFPRSTRIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLA 253

Query: 458 ALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGH 493
           ALDY VCL S+VFV T GGNF   + GHRRYL    
Sbjct: 254 ALDYIVCLESDVFVPTYGGNFAKAVAGHRRYLGHRK 289

Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl\|CDD\|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase	Back alignment and domain information

>gnl\|CDD\|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		570
PF10250		351	O-FucT: GDP-fucose protein O-fucosyltransferase; I	100.0
KOG3849		386	consensus GDP-fucose protein O-fucosyltransferase	97.31
PF05830		321	NodZ: Nodulation protein Z (NodZ); InterPro: IPR00	95.24

>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats	Back alignment and domain information

Probab=100.00  E-value=7.3e-56  Score=451.38  Aligned_cols=306  Identities=37%  Similarity=0.634  Sum_probs=208.1

Q ss_pred             ecCchhHHHHHHHHHHHHHHHhcCeEEeccccccccccCCCC-----CCCCCChHHHHHHhcccccccccCchHHHhhhc
Q 008317          164 ANGGLNQQRLSICDAVAVAGLLNATLVIPIFHLNSVWRDSSN-----FGDIFDEDFFMHALRSNVNVVKELPEDILQQFD  238 (570)
Q Consensus       164 ~nGGLNQqR~~IcDaVavAriLNATLVlP~l~~~s~W~D~S~-----F~dIFD~dhFI~sL~~dVrIVk~LP~~~~~~~~  238 (570)
                      +.||+||||.++++||++|++||+|||||.+.....|+|.++     |+++||+++|++.++++|.+.+.+|..+.....
T Consensus         6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~   85 (351)
T PF10250_consen    6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFR   85 (351)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccc
Confidence            899999999999999999999999999999999999999988     999999999999999999999999876644221


Q ss_pred             ccc-------------------------cceeeccccc-CCChhhHHhhhhhhhhhc------ceEEEccCCcccccC-C
Q 008317          239 HNI-------------------------SSIVNLRVKG-WSSPTHYLQKVLPKLQHL------GAVRIAPFSNRLAQG-V  285 (570)
Q Consensus       239 ~~~-------------------------~~~~~~~~~~-~s~~~yY~~~vlP~l~k~------~VI~l~~f~~rLa~~-l  285 (570)
                      ...                         .....+.... |+.+.+|.++++|.+.++      +++.|.++..++..+ .
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  165 (351)
T PF10250_consen   86 LQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYL  165 (351)
T ss_dssp             EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GG
T ss_pred             hhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhccc
Confidence            100                         0112223333 788999999999999887      999999999999876 7


Q ss_pred             CCccccccceecccccccchhHHHHHHHHHHHHhhcccCCCCceEEEeeccccchhhhccccCCCChhHHHHHHHHHHhh
Q 008317          286 PSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERS  365 (570)
Q Consensus       286 p~diQrLRCrvnf~ALrF~~~I~~lg~~lV~Rmr~~s~~~~g~yiAlHLRfE~DMlAfsgC~~~~~~~E~~eL~~~R~~~  365 (570)
                      +.++|+        +|+|+++|+++|++++++|+.    .+++|||+|||+|+||  +++|.+++   ++..|..+|.. 
T Consensus       166 ~~~~~r--------~l~~~~~i~~~a~~~i~~~~~----~~~~yiavHlR~~~D~--~~~C~~~~---~~~~~~~~~~~-  227 (351)
T PF10250_consen  166 DRDLQR--------YLRFSPEIRELADKFIKRLLA----GGGPYIAVHLRRGKDW--FSACEFKG---ERHLLASPRCW-  227 (351)
T ss_dssp             GGGGGG--------G--B-HHHHHHHHHHHHHH--------SSEEEEEE--SHHH--HHHHCT-T-------TTTHHHH-
T ss_pred             CccceE--------EEecCHHHHHHHHHHHHHhhc----ccCceEEEeecccCch--HhhcccCC---chHHHHHhHhh-
Confidence            788887        999999999999999999993    4689999999999999  89999955   66777777653 


Q ss_pred             hccccccCCcccCCcccccCCCCCCCHHHHHHHHhhcCCCCCcEEEEeeccccCccccchhHHhhCCCccccccCCCHHH
Q 008317          366 WRGKFRKRGRVIRPGANRVDGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEE  445 (570)
Q Consensus       366 wk~k~~k~~~~i~~~~~R~~G~CPLTPeEvgl~LralGf~~~T~IYlA~GeiyGg~~~l~pL~~~FPnl~tKe~L~s~eE  445 (570)
                       ..      +.+++.+.+..+.||++|++++.+++++|+.+.|.||||++++|||++.|.+|+++||++++|+++.+.+|
T Consensus       228 -~~------~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~  300 (351)
T PF10250_consen  228 -GK------KSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEE  300 (351)
T ss_dssp             --G------GGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--
T ss_pred             -cc------ccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHH
Confidence             11      25677888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhcccchhhhhhhheeeeccceeeecCCCChhhhhhhccccccCCccce
Q 008317          446 LAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKT  496 (570)
Q Consensus       446 L~pf~~~ss~~AALDYiVcl~SDVFv~t~~GNfa~~V~GhR~y~~~G~~kT  496 (570)
                      +++|.+  +++|+||++||++||+||+|..++|+.+|+++|+|.+..++||
T Consensus       301 ~~~~~~--~~~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R~~~g~~~~~~  349 (351)
T PF10250_consen  301 LEPLND--DQLAMVDQEICSRSDVFIGTCGSTFSSNIARERHYRGKPKRKS  349 (351)
T ss_dssp             S-------S--HHHHHHHHHHSSEEEE-TT-HHHHHHHHHHHHSSSS---E
T ss_pred             hhhccc--cchhHHHHHHHhcCCEEEecCcchhHHHhhcccCcCCCCCCCC
Confidence            999986  8999999999999999999998899999999999984444344

Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		570
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-11
3zy2_A		362	Putative GDP-fucose protein O-fucosyltransferase;	5e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 64.1 bits (155), Expect = 9e-11
 Identities = 62/422 (14%), Positives = 114/422 (27%), Gaps = 135/422 (31%)

Query: 217 HALRSNVNVVKELPEDILQQFDHNISSIVNLRVKGWSSPTHYLQKVLPK--LQHLGAVRI 274
           H +       +   +DIL  F+     + N   K         + +L K  + H+     
Sbjct: 5   HHMDFETGEHQYQYKDILSVFEDAF--VDNFDCKDVQD---MPKSILSKEEIDHI----- 54

Query: 275 APFSNRLAQGVPSNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGGKYVSVHL 334
                         + G   L  F  L   +      E+MV + V+   +   K++   +
Sbjct: 55  --------IMSKDAVSGTLRL--FWTLLSKQ------EEMVQKFVEEVLRINYKFLMSPI 98

Query: 335 RFETDMVAFSCCEYDGGEEEKREMDIARERSWRG--KFRKRGRVIRPGANRV--DGKCPL 390
           + E    +     Y    E+       R+R +     F K   V R             L
Sbjct: 99  KTEQRQPSMMTRMY---IEQ-------RDRLYNDNQVFAKY-NVSRLQPYLKLRQALLEL 147

Query: 391 TPLEVGMMLRGMG--------------------FDNTTSVY-VAAGKIYKAEKYVAPLRQ 429
            P    +++ G+                      D    ++ +        E  +  L++
Sbjct: 148 RP-AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF--KIFWLNLKNCNSPETVLEMLQK 204

Query: 430 MFPRLETKDT------LATPEELAAFKGHSSRLAAL-DYTVCL----------HSEVF-- 470
           +  +++   T            + + +    RL     Y  CL              F  
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264

Query: 471 -----VTTQ---------GGNFPHFLMGHR--------------RYLYGGH--------A 494
                +TT+              H  + H               +YL             
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL--DCRPQDLPREV 322

Query: 495 KTIKPDKRKL--ALLFDRPNIRWDDFKRQMKDMLSHSDVKGS-------ELRKPSASLYT 545
            T  P +  +    + D     WD++K    D L+   ++ S       E RK    L  
Sbjct: 323 LTTNPRRLSIIAESIRDGLA-TWDNWKHVNCDKLTTI-IESSLNVLEPAEYRKMFDRLSV 380

Query: 546 FP 547
           FP
Sbjct: 381 FP 382

PyMOL of 1vt4

>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Length = 362	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		570
4ap5_A		408	GDP-fucose protein O-fucosyltransferase 2; GT-B, G	99.55
3zy2_A		362	Putative GDP-fucose protein O-fucosyltransferase;	99.07
2de0_X		526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	97.48
2hhc_A		330	NODZ, nodulation fucosyltransferase NODZ; glycosyl	97.26

>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A*	Back alignment and structure

Probab=99.55  E-value=3e-14  Score=149.18  Aligned_cols=298  Identities=16%  Similarity=0.224  Sum_probs=163.5

Q ss_pred             CCCCceEEEEec-C-chhHHHHHHHHHHHHHHHhcCe----EEeccccccccccCC------CCCCCCCChHHHHHHhcc
Q 008317          154 PKSNGFLIIEAN-G-GLNQQRLSICDAVAVAGLLNAT----LVIPIFHLNSVWRDS------SNFGDIFDEDFFMHALRS  221 (570)
Q Consensus       154 ~~snGYL~V~~n-G-GLNQqR~~IcDaVavAriLNAT----LVlP~l~~~s~W~D~------S~F~dIFD~dhFI~sL~~  221 (570)
                      ...++||+-..| | |.|.||...-.|.+.|+.||.|    ||||-...---|+-.      -.|++.||++++    +.
T Consensus        19 ~~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~   94 (408)
T 4ap5_A           19 ASRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NK   94 (408)
T ss_dssp             -CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HT
T ss_pred             ccccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----Hh
Confidence            467899998864 5 8999999999999999999999    999976433335533      249999999865    55


Q ss_pred             cccccccCchHHHhhhcccc-ccee------------------------------ecccccCCChhhHHhhhhhhhhhcc
Q 008317          222 NVNVVKELPEDILQQFDHNI-SSIV------------------------------NLRVKGWSSPTHYLQKVLPKLQHLG  270 (570)
Q Consensus       222 dVrIVk~LP~~~~~~~~~~~-~~~~------------------------------~~~~~~~s~~~yY~~~vlP~l~k~~  270 (570)
                      .|+||.-  +++++..+... ..+.                              .++...+.++.|=...+  ...+..
T Consensus        95 ~vpVI~m--eeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v--~~~~~~  170 (408)
T 4ap5_A           95 NIPVIEY--EQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEET--RGLNVS  170 (408)
T ss_dssp             TSCEEEH--HHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTC--EEEEEE
T ss_pred             hCCeeEH--HHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCccccccc--ccCCce
Confidence            6677643  33333211100 0000                              00000000111100000  000111


Q ss_pred             eEEEccCCccccc---------------------CCC--CccccccceecccccccchhHHHHHHHHHHHHhhcccCCCC
Q 008317          271 AVRIAPFSNRLAQ---------------------GVP--SNIQGLRCLANFEALRFSEPIRMLAEKMVDRMVKNSSQSGG  327 (570)
Q Consensus       271 VI~l~~f~~rLa~---------------------~lp--~diQrLRCrvnf~ALrF~~~I~~lg~~lV~Rmr~~s~~~~g  327 (570)
                      -+.+.+..+.+..                     +.|  .+...+     -..|+|.+.|.+.|++.++..-.      +
T Consensus       171 c~~~~~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~-----~r~l~~s~~l~~~a~~fi~~~L~------~  239 (408)
T 4ap5_A          171 CLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDT-----RRSMVFARHLREVGDEFRSRHLN------S  239 (408)
T ss_dssp             EEEECSBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHH-----HHTCCBCHHHHHHHHHHHHHHHC------C
T ss_pred             eEEEeecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhH-----HHHhhhhHHHHHHHHHHHHHHhC------c
Confidence            1122111111110                     000  011111     13689999999999998887642      3


Q ss_pred             ceEEEeeccccchhhhccccCCCChhHHHHHHHHHHhhhccccccCCcccCCcccccCC-CCCCCHHHHHHHHhhcCCCC
Q 008317          328 KYVSVHLRFETDMVAFSCCEYDGGEEEKREMDIARERSWRGKFRKRGRVIRPGANRVDG-KCPLTPLEVGMMLRGMGFDN  406 (570)
Q Consensus       328 ~yiAlHLRfE~DMlAfsgC~~~~~~~E~~eL~~~R~~~wk~k~~k~~~~i~~~~~R~~G-~CPLTPeEvgl~LralGf~~  406 (570)
                      +|+++|+|.+.|+...  |.......         ...+..-+-+++     +-..... .||-.++-+..+.+.|-=-+
T Consensus       240 ~~~~~h~r~~~dw~~~--~~~~~~~~---------~~~y~~~H~Rr~-----d~~~~~~~~~ps~~~~~~~i~~~~~~~~  303 (408)
T 4ap5_A          240 TDDADRIPFQEDWMKM--KVKLGSAL---------GGPYLGVHLRRK-----DFIWGHRQDVPSLEGAVRKIRSLMKTHR  303 (408)
T ss_dssp             CTTTTTCCCCSSGGGC--CCCTTCBC---------CEEEEEEEECCT-----TTTTTTCSSSCCHHHHHHHHHHHHHHHT
T ss_pred             ccceeecccchhHhhh--hccccccc---------CCCccccccccc-----cchhhhhccCCCHHHHHHHHHHHHHhcC
Confidence            5666666666665543  32211100         000111110100     0000111 22322222222322222223


Q ss_pred             CcEEEEeeccccCccccchhHHhhCCCccccccCCCHHHHhhhcccchhhhhhhheeeeccceeeecCCCChhhhhhhcc
Q 008317          407 TTSVYVAAGKIYKAEKYVAPLRQMFPRLETKDTLATPEELAAFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHR  486 (570)
Q Consensus       407 ~T~IYlA~GeiyGg~~~l~pL~~~FPnl~tKe~L~s~eEL~pf~~~ss~~AALDYiVcl~SDVFv~t~~GNfa~~V~GhR  486 (570)
                      -+.||||+-+   .+..+..|++.+|.++.-..  ..+++..+.  ....|.||-+||.+||+||+|..++|+..|.=.|
T Consensus       304 ~~~VyiATD~---~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~--d~~~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR  376 (408)
T 4ap5_A          304 LDKVFVATDA---VRKEYEELKKLLPEMVRFEP--TWEELELYK--DGGVAIIDQWICAHARFFIGTSVSTFSFRIHEER  376 (408)
T ss_dssp             CSCEEEEECC---CHHHHHHHHHHCTTEECCCC--CHHHHHHHH--HHHHHHHHHHHHHTEEEEEBCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCC---chhHHHHHHHhCCCcEEecC--cchhhhccC--cchhhHHHHHHHHhCCeeEeCCcCchhHHHHHHH
Confidence            4569999865   24447889999998764332  346666664  4578999999999999999999999999999999


Q ss_pred             ccccCCccc
Q 008317          487 RYLYGGHAK  495 (570)
Q Consensus       487 ~y~~~G~~k  495 (570)
                      -++  |+.+
T Consensus       377 ~~~--G~~~  383 (408)
T 4ap5_A          377 EIL--GLDP  383 (408)
T ss_dssp             HHH--TBCG
T ss_pred             Hhc--CCCC
Confidence            987  7753

PyMOL of 4ap5

>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*	Back alignment and structure

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}	Back alignment and structure

>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00